Query 045407
Match_columns 382
No_of_seqs 169 out of 413
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 22:58:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfg_A N-methyltransferase; N, 99.9 1.3E-24 4.6E-29 198.5 19.2 208 83-358 18-235 (263)
2 3d2l_A SAM-dependent methyltra 99.9 5.1E-24 1.8E-28 190.3 18.2 211 84-359 8-222 (243)
3 1y8c_A S-adenosylmethionine-de 99.9 1.2E-23 4E-28 187.4 20.3 211 84-359 7-224 (246)
4 3bxo_A N,N-dimethyltransferase 99.9 9.8E-23 3.3E-27 181.6 22.7 207 84-358 9-225 (239)
5 1wzn_A SAM-dependent methyltra 99.9 3.4E-23 1.2E-27 187.2 19.5 214 82-360 11-231 (252)
6 3g2m_A PCZA361.24; SAM-depende 99.9 8.3E-22 2.8E-26 184.3 16.9 206 85-358 57-272 (299)
7 3thr_A Glycine N-methyltransfe 99.9 1.3E-21 4.4E-26 181.0 17.5 226 85-365 29-274 (293)
8 4gek_A TRNA (CMO5U34)-methyltr 99.9 9.8E-22 3.4E-26 184.8 11.6 191 94-362 51-247 (261)
9 3g5l_A Putative S-adenosylmeth 99.8 7.3E-20 2.5E-24 165.9 15.5 218 82-379 12-233 (253)
10 3dtn_A Putative methyltransfer 99.8 7.8E-20 2.7E-24 163.5 11.4 170 112-364 43-218 (234)
11 3h2b_A SAM-dependent methyltra 99.8 2.2E-18 7.5E-23 150.9 14.9 154 96-360 29-182 (203)
12 3sm3_A SAM-dependent methyltra 99.8 9.3E-18 3.2E-22 148.3 16.6 170 114-360 31-207 (235)
13 3bkw_A MLL3908 protein, S-aden 99.8 1.8E-18 6.2E-23 154.4 12.0 207 80-365 9-218 (243)
14 1ve3_A Hypothetical protein PH 99.8 4.2E-18 1.4E-22 150.5 13.9 175 114-358 39-213 (227)
15 1ri5_A MRNA capping enzyme; me 99.8 2.5E-17 8.5E-22 151.2 18.2 180 114-358 65-248 (298)
16 2a14_A Indolethylamine N-methy 99.8 2.6E-18 8.9E-23 159.0 11.6 189 80-358 17-236 (263)
17 2vdw_A Vaccinia virus capping 99.7 1.2E-17 4.1E-22 160.0 13.7 185 114-358 49-244 (302)
18 3dlc_A Putative S-adenosyl-L-m 99.7 4.7E-18 1.6E-22 148.3 9.9 156 114-359 44-202 (219)
19 3e8s_A Putative SAM dependent 99.7 9.7E-18 3.3E-22 147.0 11.8 157 113-359 52-208 (227)
20 3ou2_A SAM-dependent methyltra 99.7 5.1E-17 1.7E-21 142.4 15.9 102 114-279 47-148 (218)
21 2p7i_A Hypothetical protein; p 99.7 1E-17 3.6E-22 148.5 11.4 167 98-358 30-197 (250)
22 3e23_A Uncharacterized protein 99.7 2.5E-17 8.7E-22 145.3 12.9 150 98-359 31-181 (211)
23 1xtp_A LMAJ004091AAA; SGPP, st 99.7 8E-17 2.7E-21 144.9 15.2 160 97-359 78-237 (254)
24 3ocj_A Putative exported prote 99.7 4E-17 1.4E-21 153.6 13.3 181 100-358 107-289 (305)
25 3l8d_A Methyltransferase; stru 99.7 8.4E-17 2.9E-21 143.8 14.5 145 114-358 54-198 (242)
26 3lcc_A Putative methyl chlorid 99.7 6E-17 2.1E-21 145.5 13.3 170 100-381 55-224 (235)
27 1pjz_A Thiopurine S-methyltran 99.7 3.2E-17 1.1E-21 146.5 10.2 121 100-275 10-138 (203)
28 3jwh_A HEN1; methyltransferase 99.7 2.4E-16 8.2E-21 139.9 15.4 123 99-278 19-142 (217)
29 3ujc_A Phosphoethanolamine N-m 99.7 1.1E-16 3.7E-21 144.3 13.3 151 112-358 54-204 (266)
30 1vl5_A Unknown conserved prote 99.7 8E-17 2.7E-21 146.8 12.5 166 94-358 22-188 (260)
31 3dli_A Methyltransferase; PSI- 99.7 1E-16 3.5E-21 144.7 12.9 141 114-358 42-182 (240)
32 4htf_A S-adenosylmethionine-de 99.7 8.8E-17 3E-21 148.7 12.7 161 114-358 69-230 (285)
33 3f4k_A Putative methyltransfer 99.7 2.5E-16 8.6E-21 142.3 15.2 177 83-358 16-194 (257)
34 3hnr_A Probable methyltransfer 99.7 7.3E-17 2.5E-21 142.6 11.2 100 114-277 46-145 (220)
35 3kkz_A Uncharacterized protein 99.7 7.9E-17 2.7E-21 147.6 11.7 134 83-276 16-149 (267)
36 3jwg_A HEN1, methyltransferase 99.7 1.2E-16 4.1E-21 141.8 12.3 123 99-278 19-142 (219)
37 2ex4_A Adrenal gland protein A 99.7 1.6E-16 5.5E-21 143.5 12.9 144 114-359 80-224 (241)
38 3ofk_A Nodulation protein S; N 99.7 5.7E-16 1.9E-20 136.8 15.3 117 100-277 38-154 (216)
39 3cgg_A SAM-dependent methyltra 99.7 8.9E-16 3E-20 131.2 15.9 128 114-359 47-174 (195)
40 2kw5_A SLR1183 protein; struct 99.7 1.4E-16 4.8E-21 139.3 10.9 158 116-379 32-189 (202)
41 3hem_A Cyclopropane-fatty-acyl 99.7 1.2E-16 4E-21 149.6 10.7 118 100-278 60-184 (302)
42 2gb4_A Thiopurine S-methyltran 99.7 3E-16 1E-20 146.7 12.9 122 100-275 55-189 (252)
43 3dh0_A SAM dependent methyltra 99.7 2.9E-16 1E-20 138.6 11.8 141 114-358 38-179 (219)
44 2g72_A Phenylethanolamine N-me 99.7 4.9E-16 1.7E-20 144.6 13.7 163 113-364 71-260 (289)
45 2i62_A Nicotinamide N-methyltr 99.7 4.3E-16 1.5E-20 140.6 12.9 157 112-359 55-238 (265)
46 1nkv_A Hypothetical protein YJ 99.7 2.9E-16 9.9E-21 141.8 11.0 149 112-358 35-185 (256)
47 2p8j_A S-adenosylmethionine-de 99.7 4.5E-16 1.5E-20 136.1 11.4 156 114-357 24-180 (209)
48 3ccf_A Cyclopropane-fatty-acyl 99.6 4.8E-16 1.7E-20 143.6 11.1 152 113-359 57-209 (279)
49 3mgg_A Methyltransferase; NYSG 99.6 9E-17 3.1E-21 147.3 6.0 119 99-276 23-141 (276)
50 2p35_A Trans-aconitate 2-methy 99.6 3.6E-16 1.2E-20 141.0 9.8 103 112-279 32-134 (259)
51 3bus_A REBM, methyltransferase 99.6 1.2E-15 4.2E-20 139.3 13.4 157 109-358 57-214 (273)
52 3g07_A 7SK snRNA methylphospha 99.6 1.3E-16 4.4E-21 150.3 6.4 117 114-277 47-220 (292)
53 1xxl_A YCGJ protein; structura 99.6 5.6E-16 1.9E-20 140.4 10.4 151 114-359 22-173 (239)
54 1vlm_A SAM-dependent methyltra 99.6 1.5E-15 5.1E-20 135.6 12.7 140 114-359 48-187 (219)
55 2avn_A Ubiquinone/menaquinone 99.6 1.4E-15 4.7E-20 139.5 11.9 112 100-279 43-154 (260)
56 3vc1_A Geranyl diphosphate 2-C 99.6 9.2E-16 3.1E-20 144.7 10.6 148 114-358 118-267 (312)
57 2o57_A Putative sarcosine dime 99.6 2.5E-15 8.6E-20 139.4 12.9 105 112-276 81-186 (297)
58 3bgv_A MRNA CAP guanine-N7 met 99.6 7.1E-15 2.4E-19 138.4 15.6 189 113-358 34-230 (313)
59 1kpg_A CFA synthase;, cyclopro 99.6 1.4E-14 4.8E-19 133.7 17.0 104 114-278 65-169 (287)
60 4fsd_A Arsenic methyltransfera 99.6 2.6E-15 8.9E-20 146.9 11.6 117 114-279 84-206 (383)
61 3cc8_A Putative methyltransfer 99.6 3.5E-15 1.2E-19 131.0 11.2 156 113-362 32-187 (230)
62 2fk8_A Methoxy mycolic acid sy 99.6 1.4E-14 4.9E-19 136.1 16.1 104 114-278 91-195 (318)
63 3mq2_A 16S rRNA methyltransfer 99.6 1.4E-15 4.8E-20 135.1 7.5 112 114-278 28-141 (218)
64 3dp7_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 144.6 10.3 160 114-358 180-340 (363)
65 3ege_A Putative methyltransfer 99.6 1.3E-15 4.4E-20 140.0 6.6 102 109-278 30-132 (261)
66 3i53_A O-methyltransferase; CO 99.6 3.9E-14 1.3E-18 134.7 16.4 149 114-358 170-319 (332)
67 3mti_A RRNA methylase; SAM-dep 99.6 8.6E-15 2.9E-19 126.6 10.8 121 99-280 10-138 (185)
68 3bkx_A SAM-dependent methyltra 99.6 6.9E-15 2.4E-19 134.4 10.6 176 101-358 32-217 (275)
69 2qe6_A Uncharacterized protein 99.6 2.8E-14 9.7E-19 134.5 14.9 132 99-278 63-197 (274)
70 2yqz_A Hypothetical protein TT 99.6 2.9E-14 9.8E-19 128.6 13.8 130 85-276 10-140 (263)
71 2r3s_A Uncharacterized protein 99.6 1.2E-14 4.2E-19 137.0 11.8 187 79-358 132-321 (335)
72 3gwz_A MMCR; methyltransferase 99.6 9.1E-15 3.1E-19 142.2 11.2 154 112-359 201-355 (369)
73 1zx0_A Guanidinoacetate N-meth 99.6 7.6E-15 2.6E-19 132.7 9.2 106 114-275 61-168 (236)
74 2aot_A HMT, histamine N-methyl 99.6 9.7E-15 3.3E-19 136.5 10.1 197 78-358 10-219 (292)
75 3m33_A Uncharacterized protein 99.5 1.4E-14 4.7E-19 130.5 10.1 90 114-274 49-139 (226)
76 3mcz_A O-methyltransferase; ad 99.5 2E-14 6.9E-19 137.2 11.6 188 80-358 149-337 (352)
77 3g5t_A Trans-aconitate 3-methy 99.5 3.4E-14 1.2E-18 132.7 12.8 139 81-275 8-147 (299)
78 2pxx_A Uncharacterized protein 99.5 3.2E-14 1.1E-18 123.9 11.7 121 99-280 30-162 (215)
79 4hg2_A Methyltransferase type 99.5 7.7E-15 2.6E-19 137.9 8.1 97 115-279 41-137 (257)
80 2xvm_A Tellurite resistance pr 99.5 2.8E-14 9.4E-19 123.2 10.7 105 114-278 33-138 (199)
81 3ggd_A SAM-dependent methyltra 99.5 5.8E-14 2E-18 126.5 12.1 109 114-279 57-166 (245)
82 4a6d_A Hydroxyindole O-methylt 99.5 5.7E-14 1.9E-18 136.5 12.6 152 114-358 180-332 (353)
83 2ip2_A Probable phenazine-spec 99.5 7.2E-14 2.5E-18 132.5 13.0 152 115-359 169-321 (334)
84 1qzz_A RDMB, aclacinomycin-10- 99.5 7.5E-14 2.6E-18 134.0 13.3 153 114-359 183-338 (374)
85 3reo_A (ISO)eugenol O-methyltr 99.5 1.7E-14 5.8E-19 140.7 8.7 150 114-359 204-354 (368)
86 1af7_A Chemotaxis receptor met 99.5 1.5E-13 5E-18 131.2 14.4 111 114-277 106-252 (274)
87 3grz_A L11 mtase, ribosomal pr 99.5 7.7E-14 2.6E-18 122.7 11.5 111 99-276 48-158 (205)
88 3e05_A Precorrin-6Y C5,15-meth 99.5 1.4E-13 4.8E-18 121.3 13.1 103 114-278 41-143 (204)
89 3gu3_A Methyltransferase; alph 99.5 7.4E-14 2.5E-18 130.0 11.7 103 112-275 21-124 (284)
90 3orh_A Guanidinoacetate N-meth 99.5 3.2E-14 1.1E-18 130.3 8.8 108 114-276 61-169 (236)
91 1tw3_A COMT, carminomycin 4-O- 99.5 1.3E-13 4.5E-18 131.9 13.1 154 113-359 183-338 (360)
92 3p9n_A Possible methyltransfer 99.5 1.2E-13 4E-18 120.6 11.7 109 114-279 45-155 (189)
93 4e2x_A TCAB9; kijanose, tetron 99.5 7.8E-15 2.7E-19 143.6 4.4 143 114-358 108-251 (416)
94 2gs9_A Hypothetical protein TT 99.5 6.8E-14 2.3E-18 123.0 9.9 111 100-280 25-135 (211)
95 1x19_A CRTF-related protein; m 99.5 1.9E-13 6.6E-18 131.5 13.8 185 83-359 162-347 (359)
96 1dus_A MJ0882; hypothetical pr 99.5 4.1E-13 1.4E-17 114.5 14.3 107 113-280 52-160 (194)
97 3r0q_C Probable protein argini 99.5 5.7E-14 1.9E-18 137.9 10.2 137 82-277 31-169 (376)
98 3p9c_A Caffeic acid O-methyltr 99.5 3.4E-14 1.2E-18 138.5 8.5 149 114-359 202-352 (364)
99 1fp1_D Isoliquiritigenin 2'-O- 99.5 2.7E-14 9.1E-19 138.6 7.3 181 79-359 177-359 (372)
100 3m70_A Tellurite resistance pr 99.5 6.8E-14 2.3E-18 129.4 9.6 101 114-275 121-221 (286)
101 3eey_A Putative rRNA methylase 99.5 2.6E-13 8.9E-18 118.4 12.4 113 115-280 24-142 (197)
102 3lst_A CALO1 methyltransferase 99.5 2.5E-13 8.6E-18 130.6 13.3 151 113-359 184-335 (348)
103 4dzr_A Protein-(glutamine-N5) 99.5 1.9E-14 6.3E-19 125.1 4.0 81 94-179 10-91 (215)
104 2b3t_A Protein methyltransfera 99.5 3.4E-13 1.2E-17 125.3 12.8 124 96-277 93-238 (276)
105 1yzh_A TRNA (guanine-N(7)-)-me 99.5 3.1E-13 1.1E-17 120.4 11.6 110 114-277 42-156 (214)
106 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1E-13 3.5E-18 126.4 8.6 112 114-278 35-151 (218)
107 3njr_A Precorrin-6Y methylase; 99.5 5.7E-13 2E-17 119.5 13.0 100 114-279 56-156 (204)
108 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.7E-13 1.6E-17 113.8 11.7 103 114-279 26-129 (178)
109 1nt2_A Fibrillarin-like PRE-rR 99.4 2.9E-13 9.9E-18 122.6 10.6 104 115-278 59-162 (210)
110 1o9g_A RRNA methyltransferase; 99.4 4.9E-13 1.7E-17 122.1 12.1 115 112-275 50-212 (250)
111 3q87_B N6 adenine specific DNA 99.4 8.1E-13 2.8E-17 114.9 12.6 113 93-277 5-123 (170)
112 1fp2_A Isoflavone O-methyltran 99.4 6.3E-14 2.2E-18 134.8 6.1 148 114-359 189-340 (352)
113 3q7e_A Protein arginine N-meth 99.4 1.5E-13 5E-18 133.6 8.2 108 114-278 67-174 (349)
114 3ntv_A MW1564 protein; rossman 99.4 2.1E-13 7.1E-18 123.9 8.7 115 99-276 61-175 (232)
115 1xdz_A Methyltransferase GIDB; 99.4 9.5E-14 3.2E-18 126.3 6.3 102 114-275 71-172 (240)
116 2fca_A TRNA (guanine-N(7)-)-me 99.4 3.6E-13 1.2E-17 121.3 9.9 109 115-277 40-153 (213)
117 3uwp_A Histone-lysine N-methyl 99.4 9.2E-13 3.2E-17 134.0 13.9 124 99-278 160-290 (438)
118 3duw_A OMT, O-methyltransferas 99.4 8.5E-13 2.9E-17 117.5 11.6 107 114-276 59-166 (223)
119 2fyt_A Protein arginine N-meth 99.4 7E-13 2.4E-17 128.5 11.6 135 84-276 36-170 (340)
120 3fpf_A Mtnas, putative unchara 99.4 8.3E-13 2.8E-17 128.4 11.8 104 112-279 121-224 (298)
121 3bwc_A Spermidine synthase; SA 99.4 3.7E-13 1.2E-17 128.6 9.2 114 112-276 94-209 (304)
122 3opn_A Putative hemolysin; str 99.4 7.3E-14 2.5E-18 129.2 4.0 43 114-157 38-80 (232)
123 3u81_A Catechol O-methyltransf 99.4 3E-12 1E-16 114.8 14.3 125 96-277 45-170 (221)
124 3p2e_A 16S rRNA methylase; met 99.4 9.8E-14 3.3E-18 127.1 4.6 63 114-180 25-91 (225)
125 3iv6_A Putative Zn-dependent a 99.4 1.6E-12 5.5E-17 123.5 13.1 106 114-280 46-151 (261)
126 1g6q_1 HnRNP arginine N-methyl 99.4 7.2E-13 2.5E-17 127.5 10.4 134 85-276 11-144 (328)
127 3lpm_A Putative methyltransfer 99.4 1.1E-12 3.9E-17 120.7 11.2 112 114-279 50-177 (259)
128 2pjd_A Ribosomal RNA small sub 99.4 1.6E-12 5.5E-17 125.4 12.6 128 114-302 197-326 (343)
129 1fbn_A MJ fibrillarin homologu 99.4 1.6E-12 5.4E-17 117.5 11.4 103 114-276 75-177 (230)
130 2ift_A Putative methylase HI07 99.4 9.2E-13 3.1E-17 117.5 9.6 108 115-281 55-167 (201)
131 3dmg_A Probable ribosomal RNA 99.4 4E-12 1.4E-16 126.1 14.8 146 99-306 217-366 (381)
132 3ckk_A TRNA (guanine-N(7)-)-me 99.4 8.7E-13 3E-17 121.7 9.3 114 114-277 47-168 (235)
133 3tfw_A Putative O-methyltransf 99.4 2E-12 6.8E-17 119.0 11.7 105 114-276 64-169 (248)
134 3hp7_A Hemolysin, putative; st 99.4 3.1E-13 1.1E-17 130.7 6.6 158 114-374 86-244 (291)
135 1jsx_A Glucose-inhibited divis 99.4 6.9E-13 2.4E-17 116.2 8.2 100 115-278 67-166 (207)
136 3i9f_A Putative type 11 methyl 99.4 4.5E-13 1.5E-17 114.0 6.7 94 114-276 18-111 (170)
137 3tr6_A O-methyltransferase; ce 99.4 1.5E-12 5E-17 115.9 10.1 119 99-276 54-173 (225)
138 3giw_A Protein of unknown func 99.4 2.2E-12 7.7E-17 124.3 11.9 122 113-279 78-202 (277)
139 3dr5_A Putative O-methyltransf 99.4 1.5E-12 5.3E-17 118.8 10.1 119 99-276 43-162 (221)
140 3lbf_A Protein-L-isoaspartate 99.4 1.9E-12 6.4E-17 114.0 10.1 101 112-279 76-176 (210)
141 3evz_A Methyltransferase; NYSG 99.4 1.2E-12 4E-17 116.9 8.8 108 114-278 56-180 (230)
142 4dcm_A Ribosomal RNA large sub 99.4 4.1E-12 1.4E-16 125.5 13.5 133 114-302 223-357 (375)
143 2ozv_A Hypothetical protein AT 99.4 2.8E-12 9.5E-17 119.2 11.3 119 114-277 37-170 (260)
144 1zg3_A Isoflavanone 4'-O-methy 99.4 2.8E-13 9.6E-18 130.5 4.5 149 114-359 194-346 (358)
145 1l3i_A Precorrin-6Y methyltran 99.4 2.3E-12 7.7E-17 109.7 9.6 105 112-279 32-136 (192)
146 2nxc_A L11 mtase, ribosomal pr 99.4 4.8E-12 1.7E-16 117.2 12.3 96 114-275 121-216 (254)
147 2esr_A Methyltransferase; stru 99.3 1.8E-12 6.3E-17 111.1 8.7 108 114-280 32-141 (177)
148 1ws6_A Methyltransferase; stru 99.3 1.5E-12 5.2E-17 109.7 8.0 109 114-280 42-150 (171)
149 1nv8_A HEMK protein; class I a 99.3 2.3E-12 7.8E-17 122.2 10.0 62 115-180 125-186 (284)
150 2ipx_A RRNA 2'-O-methyltransfe 99.3 2.5E-12 8.4E-17 116.0 9.6 104 115-278 79-183 (233)
151 3gjy_A Spermidine synthase; AP 99.3 1.6E-12 5.4E-17 127.2 8.9 112 114-280 90-203 (317)
152 2fpo_A Methylase YHHF; structu 99.3 2.7E-12 9.2E-17 114.5 9.6 105 115-279 56-162 (202)
153 2hnk_A SAM-dependent O-methylt 99.3 3.5E-12 1.2E-16 115.7 10.3 134 94-277 45-181 (239)
154 2yxd_A Probable cobalt-precorr 99.3 6.1E-12 2.1E-16 106.5 10.8 99 113-279 35-133 (183)
155 3fzg_A 16S rRNA methylase; met 99.3 3.5E-13 1.2E-17 124.8 3.3 108 114-282 50-160 (200)
156 2y1w_A Histone-arginine methyl 99.3 3.6E-12 1.2E-16 123.5 10.5 126 92-277 30-155 (348)
157 2zfu_A Nucleomethylin, cerebra 99.3 3.4E-12 1.2E-16 112.7 9.4 82 114-275 68-149 (215)
158 3g89_A Ribosomal RNA small sub 99.3 9.3E-13 3.2E-17 122.5 6.1 102 114-275 81-182 (249)
159 3adn_A Spermidine synthase; am 99.3 2.2E-12 7.5E-17 123.7 8.7 113 113-277 83-198 (294)
160 3gdh_A Trimethylguanosine synt 99.3 3.2E-13 1.1E-17 121.6 2.6 116 98-278 66-182 (241)
161 2fhp_A Methylase, putative; al 99.3 4.9E-12 1.7E-16 108.3 9.8 111 114-280 45-157 (187)
162 3mb5_A SAM-dependent methyltra 99.3 4.7E-12 1.6E-16 114.9 10.1 101 114-278 94-195 (255)
163 2frn_A Hypothetical protein PH 99.3 1.8E-12 6.2E-17 121.8 7.5 99 115-277 127-225 (278)
164 1g8a_A Fibrillarin-like PRE-rR 99.3 6.6E-12 2.3E-16 112.3 10.7 103 114-276 74-177 (227)
165 1p91_A Ribosomal RNA large sub 99.3 3.8E-12 1.3E-16 116.4 9.3 107 101-279 74-180 (269)
166 2pwy_A TRNA (adenine-N(1)-)-me 99.3 4.5E-12 1.5E-16 114.4 9.6 102 114-278 97-199 (258)
167 3r3h_A O-methyltransferase, SA 99.3 9.6E-13 3.3E-17 121.5 5.3 121 97-276 48-169 (242)
168 2bm8_A Cephalosporin hydroxyla 99.3 3.6E-12 1.2E-16 117.3 9.0 114 97-277 69-187 (236)
169 3htx_A HEN1; HEN1, small RNA m 99.3 8.5E-12 2.9E-16 135.8 12.8 110 114-277 722-834 (950)
170 1vbf_A 231AA long hypothetical 99.3 1.1E-11 3.9E-16 110.5 11.3 97 114-279 71-167 (231)
171 2b25_A Hypothetical protein; s 99.3 6E-12 2.1E-16 120.2 10.1 106 114-278 106-220 (336)
172 3c3p_A Methyltransferase; NP_9 99.3 2.6E-12 9E-17 113.8 6.9 102 114-276 57-159 (210)
173 1sui_A Caffeoyl-COA O-methyltr 99.3 8.1E-12 2.8E-16 115.7 10.4 109 114-276 80-189 (247)
174 4azs_A Methyltransferase WBDD; 99.3 4.3E-12 1.5E-16 131.0 9.3 110 114-279 67-176 (569)
175 1iy9_A Spermidine synthase; ro 99.3 5.7E-12 1.9E-16 119.0 9.3 114 113-279 75-191 (275)
176 2yxe_A Protein-L-isoaspartate 99.3 9E-12 3.1E-16 110.0 9.7 102 114-280 78-180 (215)
177 1xj5_A Spermidine synthase 1; 99.3 3E-12 1E-16 125.0 7.3 114 112-277 119-235 (334)
178 2avd_A Catechol-O-methyltransf 99.3 7.9E-12 2.7E-16 111.4 9.1 123 95-276 55-178 (229)
179 2vdv_E TRNA (guanine-N(7)-)-me 99.3 7.8E-12 2.7E-16 114.3 9.1 112 115-275 51-171 (246)
180 1mjf_A Spermidine synthase; sp 99.3 3.4E-12 1.2E-16 120.5 6.9 109 113-277 75-193 (281)
181 2gpy_A O-methyltransferase; st 99.3 1.1E-11 3.8E-16 111.5 9.9 116 99-276 44-159 (233)
182 3tma_A Methyltransferase; thum 99.3 2.5E-11 8.4E-16 117.2 12.5 109 114-278 204-318 (354)
183 3cbg_A O-methyltransferase; cy 99.3 1.1E-11 3.9E-16 112.7 9.6 124 94-276 57-181 (232)
184 2i7c_A Spermidine synthase; tr 99.3 4.7E-12 1.6E-16 119.8 7.1 114 112-278 77-193 (283)
185 2pt6_A Spermidine synthase; tr 99.3 1.1E-11 3.7E-16 119.9 9.8 114 113-279 116-232 (321)
186 1u2z_A Histone-lysine N-methyl 99.3 3E-11 1E-15 122.5 13.0 124 101-279 231-362 (433)
187 2yvl_A TRMI protein, hypotheti 99.3 2.8E-11 9.4E-16 108.6 11.2 130 80-278 57-191 (248)
188 1dl5_A Protein-L-isoaspartate 99.3 1.5E-11 5E-16 117.3 9.9 101 114-279 76-177 (317)
189 3b3j_A Histone-arginine methyl 99.3 6.4E-12 2.2E-16 128.2 7.8 105 114-277 159-263 (480)
190 2b2c_A Spermidine synthase; be 99.2 5.7E-12 2E-16 122.0 6.9 112 113-277 108-222 (314)
191 1yb2_A Hypothetical protein TA 99.2 1.1E-11 3.9E-16 115.2 8.5 101 114-278 111-212 (275)
192 2oxt_A Nucleoside-2'-O-methylt 99.2 4.4E-12 1.5E-16 119.9 5.8 104 115-279 76-187 (265)
193 2o07_A Spermidine synthase; st 99.2 4.9E-12 1.7E-16 121.5 5.9 113 112-277 94-209 (304)
194 4hc4_A Protein arginine N-meth 99.2 1.5E-11 5E-16 122.6 9.4 125 92-277 63-189 (376)
195 3c3y_A Pfomt, O-methyltransfer 99.2 2.7E-11 9.1E-16 111.0 10.3 123 97-277 58-181 (237)
196 1ej0_A FTSJ; methyltransferase 99.2 2.4E-11 8.2E-16 101.2 8.9 109 114-281 23-140 (180)
197 1inl_A Spermidine synthase; be 99.2 6E-12 2.1E-16 120.0 5.8 113 113-278 90-206 (296)
198 4df3_A Fibrillarin-like rRNA/T 99.2 5.1E-11 1.8E-15 111.8 11.6 103 115-277 79-182 (233)
199 1o54_A SAM-dependent O-methylt 99.2 3.3E-11 1.1E-15 111.8 9.9 101 114-278 113-214 (277)
200 2wa2_A Non-structural protein 99.2 6.3E-12 2.2E-16 119.6 4.4 105 115-280 84-196 (276)
201 1i9g_A Hypothetical protein RV 99.2 2.1E-11 7.3E-16 112.0 7.8 104 114-278 100-204 (280)
202 1uir_A Polyamine aminopropyltr 99.2 1.4E-11 4.8E-16 118.4 6.7 114 113-277 77-195 (314)
203 2igt_A SAM dependent methyltra 99.2 2.4E-11 8.2E-16 118.2 8.4 114 114-278 154-273 (332)
204 3bzb_A Uncharacterized protein 99.2 1.7E-10 6E-15 108.2 14.0 113 114-275 80-203 (281)
205 1ne2_A Hypothetical protein TA 99.2 8.9E-11 3.1E-15 103.0 11.2 114 94-276 33-146 (200)
206 3dou_A Ribosomal RNA large sub 99.2 2.8E-11 9.4E-16 108.2 7.9 113 114-283 26-145 (191)
207 2p41_A Type II methyltransfera 99.2 2.1E-11 7.1E-16 117.5 7.6 104 115-281 84-195 (305)
208 3sso_A Methyltransferase; macr 99.2 3.2E-11 1.1E-15 122.1 9.3 103 113-278 216-326 (419)
209 1jg1_A PIMT;, protein-L-isoasp 99.2 5E-11 1.7E-15 107.8 9.6 101 114-280 92-192 (235)
210 2plw_A Ribosomal RNA methyltra 99.2 5.5E-10 1.9E-14 97.3 15.5 127 114-282 23-159 (201)
211 2pbf_A Protein-L-isoaspartate 99.2 6.5E-11 2.2E-15 105.6 9.2 107 114-278 81-194 (227)
212 1i1n_A Protein-L-isoaspartate 99.2 4.4E-11 1.5E-15 106.6 7.4 103 114-278 78-183 (226)
213 3a27_A TYW2, uncharacterized p 99.2 3.8E-11 1.3E-15 112.6 7.1 101 114-278 120-220 (272)
214 1wy7_A Hypothetical protein PH 99.2 3.5E-10 1.2E-14 99.2 12.8 100 114-277 50-149 (207)
215 1ixk_A Methyltransferase; open 99.2 6.1E-11 2.1E-15 113.8 8.7 138 82-277 90-246 (315)
216 2qm3_A Predicted methyltransfe 99.1 1.3E-10 4.3E-15 113.7 10.9 106 114-279 173-280 (373)
217 2nyu_A Putative ribosomal RNA 99.1 1E-10 3.6E-15 101.3 8.9 110 114-281 23-149 (196)
218 2b78_A Hypothetical protein SM 99.1 4.7E-11 1.6E-15 117.9 7.1 116 115-282 214-336 (385)
219 2h00_A Methyltransferase 10 do 99.1 1.1E-11 3.9E-16 112.8 2.2 62 114-178 66-127 (254)
220 3ajd_A Putative methyltransfer 99.1 1.3E-10 4.3E-15 108.8 8.4 112 115-277 85-211 (274)
221 2cmg_A Spermidine synthase; tr 99.1 4.3E-11 1.5E-15 112.8 5.0 100 112-277 71-171 (262)
222 3id6_C Fibrillarin-like rRNA/T 99.1 2.9E-10 1E-14 106.2 10.4 104 115-278 78-182 (232)
223 1zq9_A Probable dimethyladenos 99.1 3.9E-10 1.3E-14 106.8 11.2 75 99-180 15-90 (285)
224 3tm4_A TRNA (guanine N2-)-meth 99.1 5.4E-10 1.9E-14 109.5 11.8 63 114-180 218-281 (373)
225 2f8l_A Hypothetical protein LM 99.1 3.4E-10 1.2E-14 109.0 10.1 121 99-277 116-256 (344)
226 3v97_A Ribosomal RNA large sub 99.1 2.7E-10 9.1E-15 121.3 10.0 112 115-279 541-659 (703)
227 3kr9_A SAM-dependent methyltra 99.1 3.5E-10 1.2E-14 105.7 9.0 105 115-280 17-122 (225)
228 3frh_A 16S rRNA methylase; met 99.0 4.4E-10 1.5E-14 107.3 9.4 107 113-282 105-214 (253)
229 1r18_A Protein-L-isoaspartate( 99.0 2.7E-10 9.2E-15 102.2 7.6 103 115-279 86-196 (227)
230 3lec_A NADB-rossmann superfami 99.0 6.5E-10 2.2E-14 104.3 9.4 106 115-280 23-128 (230)
231 3lcv_B Sisomicin-gentamicin re 99.0 2.5E-10 8.5E-15 110.3 6.7 109 114-282 133-244 (281)
232 2as0_A Hypothetical protein PH 99.0 8.5E-10 2.9E-14 108.3 9.6 116 114-281 218-339 (396)
233 3gnl_A Uncharacterized protein 99.0 9.4E-10 3.2E-14 104.1 9.4 109 115-283 23-131 (244)
234 3c0k_A UPF0064 protein YCCW; P 99.0 6.4E-10 2.2E-14 109.4 8.0 116 115-282 222-344 (396)
235 2yxl_A PH0851 protein, 450AA l 99.0 2.9E-09 1E-13 106.9 11.8 109 115-276 261-388 (450)
236 4dmg_A Putative uncharacterize 99.0 5.9E-10 2E-14 111.1 6.7 105 115-278 216-328 (393)
237 1wxx_A TT1595, hypothetical pr 98.9 1.1E-09 3.8E-14 107.4 7.8 116 114-282 210-330 (382)
238 1qam_A ERMC' methyltransferase 98.9 6.9E-09 2.4E-13 96.0 12.6 75 97-180 15-89 (244)
239 2qfm_A Spermine synthase; sper 98.9 1.7E-09 5.9E-14 107.8 8.7 117 113-278 188-315 (364)
240 2yx1_A Hypothetical protein MJ 98.9 5.5E-09 1.9E-13 101.0 12.0 94 115-276 197-290 (336)
241 2h1r_A Dimethyladenosine trans 98.9 2.8E-09 9.6E-14 101.7 9.8 62 113-180 42-103 (299)
242 3tqs_A Ribosomal RNA small sub 98.9 6E-09 2E-13 98.2 11.6 75 97-180 14-88 (255)
243 1sqg_A SUN protein, FMU protei 98.9 2.2E-09 7.5E-14 106.9 8.2 109 114-276 247-373 (429)
244 3ldu_A Putative methylase; str 98.9 5.8E-09 2E-13 103.4 11.0 100 114-267 196-333 (385)
245 3m6w_A RRNA methylase; rRNA me 98.9 2.2E-09 7.5E-14 109.7 7.8 108 114-276 102-228 (464)
246 2ld4_A Anamorsin; methyltransf 98.9 6.3E-10 2.2E-14 95.6 3.2 86 115-275 14-99 (176)
247 2frx_A Hypothetical protein YE 98.9 2.1E-09 7.4E-14 109.7 7.6 110 114-277 118-246 (479)
248 3k0b_A Predicted N6-adenine-sp 98.9 8.3E-09 2.8E-13 102.8 11.6 106 114-275 202-348 (393)
249 2ih2_A Modification methylase 98.9 2.7E-09 9.3E-14 103.7 7.5 70 94-180 24-94 (421)
250 2jjq_A Uncharacterized RNA met 98.9 8.1E-09 2.8E-13 103.8 10.8 59 115-180 292-350 (425)
251 3k6r_A Putative transferase PH 98.9 3.5E-09 1.2E-13 101.5 7.8 62 115-180 127-188 (278)
252 3ldg_A Putative uncharacterize 98.8 2.2E-08 7.6E-13 99.6 13.6 106 114-275 195-341 (384)
253 1yub_A Ermam, rRNA methyltrans 98.8 3.9E-10 1.3E-14 103.5 -0.4 59 114-180 30-88 (245)
254 3fut_A Dimethyladenosine trans 98.8 2E-08 6.8E-13 95.7 11.0 73 97-180 32-104 (271)
255 3m4x_A NOL1/NOP2/SUN family pr 98.8 5.7E-09 1.9E-13 106.4 7.4 108 114-275 106-232 (456)
256 1uwv_A 23S rRNA (uracil-5-)-me 98.8 7.4E-08 2.5E-12 96.3 15.2 60 114-179 287-346 (433)
257 2xyq_A Putative 2'-O-methyl tr 98.8 7.9E-09 2.7E-13 99.7 6.8 95 115-280 65-174 (290)
258 3gru_A Dimethyladenosine trans 98.7 1.5E-08 5.3E-13 97.6 7.9 75 97-180 35-109 (295)
259 2dul_A N(2),N(2)-dimethylguano 98.7 1E-08 3.5E-13 101.7 6.4 104 114-276 48-163 (378)
260 3ftd_A Dimethyladenosine trans 98.7 7.2E-08 2.5E-12 90.1 10.3 74 97-180 16-89 (249)
261 1m6y_A S-adenosyl-methyltransf 98.7 3.4E-08 1.2E-12 95.4 8.2 62 114-180 27-88 (301)
262 3uzu_A Ribosomal RNA small sub 98.7 2.5E-08 8.7E-13 95.1 7.3 78 97-183 27-106 (279)
263 3bt7_A TRNA (uracil-5-)-methyl 98.6 4.5E-08 1.5E-12 95.7 8.0 61 114-180 214-274 (369)
264 2okc_A Type I restriction enzy 98.6 4.8E-08 1.6E-12 97.7 8.1 64 115-180 173-249 (445)
265 3v97_A Ribosomal RNA large sub 98.5 8.2E-07 2.8E-11 94.6 12.4 64 114-180 191-296 (703)
266 1qyr_A KSGA, high level kasuga 98.4 2.5E-07 8.6E-12 86.8 7.1 59 115-181 23-81 (252)
267 2b9e_A NOL1/NOP2/SUN domain fa 98.4 5.3E-07 1.8E-11 87.1 9.4 62 115-180 104-166 (309)
268 2r6z_A UPF0341 protein in RSP 98.4 1.2E-07 4.2E-12 89.1 4.8 60 115-179 85-151 (258)
269 4gqb_A Protein arginine N-meth 98.4 3.8E-07 1.3E-11 96.7 9.1 104 114-275 358-465 (637)
270 3ll7_A Putative methyltransfer 98.4 1.5E-07 5.1E-12 95.0 5.4 61 115-179 95-155 (410)
271 3ua3_A Protein arginine N-meth 98.4 5.5E-07 1.9E-11 96.7 9.7 111 114-276 410-533 (745)
272 3axs_A Probable N(2),N(2)-dime 98.4 2.1E-07 7E-12 93.3 5.0 101 115-275 54-156 (392)
273 3cvo_A Methyltransferase-like 98.3 7.6E-06 2.6E-10 75.4 13.3 135 95-277 18-154 (202)
274 2ar0_A M.ecoki, type I restric 98.3 1.3E-06 4.5E-11 90.3 8.4 64 115-180 171-255 (541)
275 3b5i_A S-adenosyl-L-methionine 98.3 2.3E-06 7.7E-11 85.4 9.2 206 114-361 53-299 (374)
276 3lkd_A Type I restriction-modi 98.2 8.4E-06 2.9E-10 84.7 12.8 65 114-180 222-289 (542)
277 3o4f_A Spermidine synthase; am 98.2 3.1E-06 1.1E-10 82.1 8.3 113 112-276 82-197 (294)
278 3khk_A Type I restriction-modi 98.1 3.8E-06 1.3E-10 87.2 7.2 63 114-179 245-322 (544)
279 2qy6_A UPF0209 protein YFCK; s 98.1 3.7E-06 1.3E-10 79.4 6.1 116 111-275 58-211 (257)
280 2k4m_A TR8_protein, UPF0146 pr 98.0 5.9E-06 2E-10 73.7 6.2 135 75-302 10-148 (153)
281 2efj_A 3,7-dimethylxanthine me 98.0 9.6E-06 3.3E-10 81.3 8.5 197 114-357 53-289 (384)
282 2oyr_A UPF0341 protein YHIQ; a 98.0 6.4E-06 2.2E-10 78.0 6.5 62 115-179 90-157 (258)
283 3evf_A RNA-directed RNA polyme 98.0 2.2E-05 7.5E-10 75.9 9.6 123 115-296 76-206 (277)
284 3s1s_A Restriction endonucleas 97.9 7.5E-05 2.6E-09 81.5 13.4 43 114-156 322-369 (878)
285 1wg8_A Predicted S-adenosylmet 97.8 4.5E-05 1.5E-09 74.0 9.2 56 115-180 24-79 (285)
286 2wk1_A NOVP; transferase, O-me 97.8 2.7E-05 9.3E-10 74.9 7.6 126 97-279 90-246 (282)
287 3c6k_A Spermine synthase; sper 97.8 3E-05 1E-09 77.8 8.1 115 113-276 205-330 (381)
288 2zig_A TTHA0409, putative modi 97.8 3.3E-05 1.1E-09 73.2 7.5 43 115-159 237-279 (297)
289 1m6e_X S-adenosyl-L-methionnin 97.6 5.8E-05 2E-09 75.0 6.0 194 112-357 50-277 (359)
290 3gcz_A Polyprotein; flavivirus 97.3 0.00011 3.9E-09 71.1 4.1 35 115-149 92-126 (282)
291 1g60_A Adenine-specific methyl 97.2 0.00078 2.7E-08 62.5 7.5 41 115-157 214-254 (260)
292 3g7u_A Cytosine-specific methy 97.2 0.0018 6.1E-08 64.2 10.5 56 115-180 3-58 (376)
293 2qrv_A DNA (cytosine-5)-methyl 97.1 0.0024 8.3E-08 61.5 10.3 62 110-180 12-74 (295)
294 3eld_A Methyltransferase; flav 97.0 0.0022 7.7E-08 62.6 9.2 35 115-149 83-117 (300)
295 3tka_A Ribosomal RNA small sub 97.0 0.0012 4.2E-08 65.5 7.3 58 115-180 59-117 (347)
296 1rjd_A PPM1P, carboxy methyl t 96.9 0.0051 1.7E-07 60.0 11.1 121 114-280 98-236 (334)
297 2c7p_A Modification methylase 96.8 0.0035 1.2E-07 60.9 9.1 55 114-180 11-65 (327)
298 1g55_A DNA cytosine methyltran 96.8 0.00083 2.9E-08 65.4 4.5 58 114-180 2-60 (343)
299 3ufb_A Type I restriction-modi 96.8 0.0052 1.8E-07 63.4 10.4 62 115-180 219-293 (530)
300 4fzv_A Putative methyltransfer 96.8 0.0017 5.7E-08 64.4 6.3 65 115-180 150-217 (359)
301 3ubt_Y Modification methylase 96.3 0.005 1.7E-07 58.2 6.1 54 116-180 2-55 (331)
302 2uyo_A Hypothetical protein ML 96.3 0.04 1.4E-06 53.2 12.5 133 99-280 89-221 (310)
303 3qv2_A 5-cytosine DNA methyltr 96.2 0.01 3.6E-07 57.7 8.2 57 114-180 10-68 (327)
304 2px2_A Genome polyprotein [con 96.0 0.0066 2.3E-07 58.4 5.6 63 234-297 138-206 (269)
305 1i4w_A Mitochondrial replicati 96.0 0.013 4.4E-07 58.0 7.6 81 92-180 32-118 (353)
306 2oo3_A Protein involved in cat 95.8 0.013 4.4E-07 56.7 6.5 55 116-178 94-148 (283)
307 4auk_A Ribosomal RNA large sub 95.7 0.0098 3.3E-07 59.6 5.3 52 116-180 214-265 (375)
308 1boo_A Protein (N-4 cytosine-s 95.6 0.018 6.3E-07 55.2 6.6 55 99-157 240-294 (323)
309 3me5_A Cytosine-specific methy 95.5 0.026 8.9E-07 58.0 7.7 59 115-180 89-147 (482)
310 3lkz_A Non-structural protein 95.4 0.034 1.2E-06 54.7 7.8 107 115-282 96-209 (321)
311 1eg2_A Modification methylase 95.0 0.035 1.2E-06 53.7 6.7 42 115-158 244-288 (319)
312 4h0n_A DNMT2; SAH binding, tra 95.0 0.02 6.7E-07 55.9 4.9 58 114-180 3-61 (333)
313 3tos_A CALS11; methyltransfera 94.6 0.15 5.2E-06 48.4 9.6 125 101-279 59-219 (257)
314 3r24_A NSP16, 2'-O-methyl tran 94.4 0.13 4.5E-06 50.7 8.9 28 255-283 196-223 (344)
315 3p8z_A Mtase, non-structural p 93.4 0.35 1.2E-05 46.4 9.5 123 115-297 80-209 (267)
316 4ft4_B DNA (cytosine-5)-methyl 91.9 0.42 1.4E-05 50.8 8.9 56 114-179 212-273 (784)
317 3h2s_A Putative NADH-flavin re 91.4 1 3.5E-05 38.8 9.3 87 127-275 16-102 (224)
318 1f8f_A Benzyl alcohol dehydrog 91.3 0.68 2.3E-05 44.3 8.8 42 115-156 192-234 (371)
319 3o38_A Short chain dehydrogena 89.3 2.6 9E-05 37.8 10.5 59 116-180 24-86 (266)
320 4dkj_A Cytosine-specific methy 89.3 0.62 2.1E-05 46.7 6.8 44 114-157 10-58 (403)
321 3o26_A Salutaridine reductase; 89.3 2.9 9.8E-05 37.8 10.8 58 116-179 14-74 (311)
322 3pxx_A Carveol dehydrogenase; 89.0 2.3 7.8E-05 38.5 9.9 58 116-180 12-84 (287)
323 3ppi_A 3-hydroxyacyl-COA dehyd 88.5 2.7 9.3E-05 38.1 10.1 55 116-180 32-89 (281)
324 3l6e_A Oxidoreductase, short-c 88.4 2.8 9.6E-05 37.4 10.0 54 117-180 6-62 (235)
325 3m6i_A L-arabinitol 4-dehydrog 88.0 3.1 0.00011 39.4 10.5 42 115-156 181-223 (363)
326 1pqw_A Polyketide synthase; ro 87.7 1.5 5.1E-05 37.7 7.4 39 115-155 40-81 (198)
327 3swr_A DNA (cytosine-5)-methyl 87.4 0.43 1.5E-05 53.2 4.7 57 114-179 540-596 (1002)
328 3ijr_A Oxidoreductase, short c 87.3 2.8 9.5E-05 38.7 9.5 58 116-180 49-110 (291)
329 3vyw_A MNMC2; tRNA wobble urid 87.2 1.6 5.5E-05 42.5 8.0 38 234-275 185-224 (308)
330 3kzv_A Uncharacterized oxidore 87.1 3.1 0.00011 37.4 9.5 56 117-180 5-63 (254)
331 3ucx_A Short chain dehydrogena 87.0 2.4 8E-05 38.4 8.6 58 116-180 13-73 (264)
332 4eso_A Putative oxidoreductase 86.8 2.3 7.9E-05 38.4 8.5 55 116-180 10-67 (255)
333 2vz8_A Fatty acid synthase; tr 86.3 0.16 5.4E-06 61.3 0.5 39 233-276 1309-1347(2512)
334 3oig_A Enoyl-[acyl-carrier-pro 86.2 3.6 0.00012 36.9 9.4 48 127-180 25-72 (266)
335 3fwz_A Inner membrane protein 86.1 6 0.00021 32.4 10.0 52 116-180 9-62 (140)
336 3llv_A Exopolyphosphatase-rela 85.6 2.7 9.3E-05 34.1 7.6 52 116-180 8-61 (141)
337 1spx_A Short-chain reductase f 85.4 3 0.0001 37.7 8.5 61 116-180 8-71 (278)
338 1xkq_A Short-chain reductase f 85.4 3.2 0.00011 37.7 8.7 61 116-180 8-71 (280)
339 3fpc_A NADP-dependent alcohol 85.1 2.4 8.3E-05 40.1 8.0 42 115-156 168-210 (352)
340 2cfc_A 2-(R)-hydroxypropyl-COM 85.1 3.7 0.00013 36.1 8.7 49 126-180 17-65 (250)
341 3dii_A Short-chain dehydrogena 85.1 3.3 0.00011 37.1 8.5 53 117-180 5-60 (247)
342 4e3z_A Putative oxidoreductase 85.0 6.7 0.00023 35.4 10.6 58 116-180 28-89 (272)
343 3jv7_A ADH-A; dehydrogenase, n 84.6 2.7 9.1E-05 39.6 8.0 42 115-156 173-215 (345)
344 3rkr_A Short chain oxidoreduct 84.3 7.4 0.00025 35.0 10.5 58 116-180 31-91 (262)
345 1iy8_A Levodione reductase; ox 84.2 4 0.00014 36.8 8.7 60 116-180 15-77 (267)
346 1xhl_A Short-chain dehydrogena 84.1 5.5 0.00019 36.9 9.9 61 116-180 28-91 (297)
347 3gvc_A Oxidoreductase, probabl 84.1 6.9 0.00024 35.9 10.4 55 116-180 31-88 (277)
348 1hxh_A 3BETA/17BETA-hydroxyste 83.9 6.1 0.00021 35.3 9.8 54 117-180 9-65 (253)
349 3s2e_A Zinc-containing alcohol 83.9 4.4 0.00015 38.0 9.2 41 115-156 168-209 (340)
350 1pl8_A Human sorbitol dehydrog 83.7 3.6 0.00012 39.0 8.6 42 115-156 173-215 (356)
351 4fs3_A Enoyl-[acyl-carrier-pro 83.6 5.3 0.00018 36.3 9.3 49 126-180 23-71 (256)
352 3pvc_A TRNA 5-methylaminomethy 83.4 1.4 4.9E-05 46.0 6.1 44 112-155 57-115 (689)
353 2d8a_A PH0655, probable L-thre 83.4 4 0.00014 38.5 8.7 41 115-156 169-211 (348)
354 1v3u_A Leukotriene B4 12- hydr 83.4 3.2 0.00011 38.8 7.9 40 115-155 147-188 (333)
355 4e6p_A Probable sorbitol dehyd 83.3 7.7 0.00026 34.8 10.2 55 116-180 10-67 (259)
356 1xu9_A Corticosteroid 11-beta- 83.3 3.2 0.00011 37.8 7.8 59 116-180 30-91 (286)
357 2gdz_A NAD+-dependent 15-hydro 82.9 5.8 0.0002 35.6 9.2 60 116-180 9-71 (267)
358 3nrc_A Enoyl-[acyl-carrier-pro 82.9 8.5 0.00029 35.0 10.4 54 116-180 28-88 (280)
359 2h6e_A ADH-4, D-arabinose 1-de 82.8 2.3 8E-05 40.1 6.8 42 115-156 172-215 (344)
360 3tjr_A Short chain dehydrogena 82.7 5.8 0.0002 36.7 9.4 58 116-180 33-93 (301)
361 2ehd_A Oxidoreductase, oxidore 82.6 8.1 0.00028 33.7 9.8 53 117-180 8-63 (234)
362 3oec_A Carveol dehydrogenase ( 82.6 6.3 0.00021 36.9 9.6 58 116-180 48-120 (317)
363 3l77_A Short-chain alcohol deh 82.5 4.2 0.00014 35.6 8.0 57 118-180 6-65 (235)
364 1cdo_A Alcohol dehydrogenase; 82.5 4.8 0.00016 38.4 9.0 42 115-156 194-236 (374)
365 2hcy_A Alcohol dehydrogenase 1 82.0 2.3 8E-05 40.1 6.5 40 115-155 171-212 (347)
366 3is3_A 17BETA-hydroxysteroid d 81.8 9.7 0.00033 34.4 10.3 58 116-180 20-81 (270)
367 3c85_A Putative glutathione-re 81.7 13 0.00046 31.3 10.7 47 121-180 44-95 (183)
368 3uog_A Alcohol dehydrogenase; 81.7 3.3 0.00011 39.5 7.5 41 115-156 191-232 (363)
369 2j3h_A NADP-dependent oxidored 81.7 4.4 0.00015 37.9 8.2 41 115-156 157-199 (345)
370 3edm_A Short chain dehydrogena 81.7 2.7 9.2E-05 38.0 6.5 58 116-180 10-71 (259)
371 3zv4_A CIS-2,3-dihydrobiphenyl 81.5 5.7 0.0002 36.3 8.8 55 116-180 7-64 (281)
372 4dry_A 3-oxoacyl-[acyl-carrier 81.5 3.7 0.00013 37.7 7.5 59 116-180 35-96 (281)
373 1w6u_A 2,4-dienoyl-COA reducta 81.3 10 0.00035 34.3 10.4 59 116-180 28-89 (302)
374 2p91_A Enoyl-[acyl-carrier-pro 81.2 9.2 0.00032 34.8 10.0 57 116-180 23-84 (285)
375 1zk4_A R-specific alcohol dehy 80.9 13 0.00043 32.6 10.5 56 117-180 9-67 (251)
376 4ej6_A Putative zinc-binding d 80.7 6.1 0.00021 37.9 9.0 42 115-156 184-226 (370)
377 1hdc_A 3-alpha, 20 beta-hydrox 80.7 6.7 0.00023 35.2 8.8 54 117-180 8-64 (254)
378 3two_A Mannitol dehydrogenase; 80.6 1.6 5.6E-05 41.2 4.9 41 115-156 178-219 (348)
379 1e3i_A Alcohol dehydrogenase, 80.6 6.1 0.00021 37.7 8.9 42 115-156 197-239 (376)
380 3svt_A Short-chain type dehydr 80.5 9.6 0.00033 34.6 9.9 61 116-180 13-76 (281)
381 2b4q_A Rhamnolipids biosynthes 80.4 6.6 0.00023 35.9 8.8 57 116-180 31-90 (276)
382 3tfo_A Putative 3-oxoacyl-(acy 80.4 10 0.00036 34.6 10.1 58 116-180 6-66 (264)
383 1jvb_A NAD(H)-dependent alcoho 80.4 2.9 9.9E-05 39.5 6.5 42 115-156 172-215 (347)
384 3l9w_A Glutathione-regulated p 80.3 6.9 0.00023 38.9 9.5 50 116-180 6-59 (413)
385 4g65_A TRK system potassium up 80.3 3.6 0.00012 41.5 7.5 49 122-180 9-59 (461)
386 1nff_A Putative oxidoreductase 80.3 10 0.00035 34.2 9.9 55 116-180 9-66 (260)
387 3r3s_A Oxidoreductase; structu 80.3 5 0.00017 37.1 8.0 58 116-180 51-113 (294)
388 2jhf_A Alcohol dehydrogenase E 80.3 6.8 0.00023 37.3 9.1 42 115-156 193-235 (374)
389 3uko_A Alcohol dehydrogenase c 80.2 3.9 0.00013 39.1 7.4 42 115-156 195-237 (378)
390 1p0f_A NADP-dependent alcohol 79.9 6.9 0.00023 37.3 9.0 42 115-156 193-235 (373)
391 2qq5_A DHRS1, dehydrogenase/re 79.9 9.6 0.00033 34.1 9.6 57 117-180 8-67 (260)
392 1xg5_A ARPG836; short chain de 79.8 9.5 0.00032 34.4 9.5 60 116-180 34-96 (279)
393 2fzw_A Alcohol dehydrogenase c 79.7 7.4 0.00025 37.0 9.1 42 115-156 192-234 (373)
394 4b7c_A Probable oxidoreductase 79.5 5.1 0.00018 37.4 7.9 41 115-156 151-193 (336)
395 1e3j_A NADP(H)-dependent ketos 79.5 6.1 0.00021 37.3 8.4 41 115-156 170-211 (352)
396 3grk_A Enoyl-(acyl-carrier-pro 79.5 6 0.0002 36.6 8.2 57 116-180 33-94 (293)
397 3ew7_A LMO0794 protein; Q8Y8U8 79.4 7.2 0.00025 33.1 8.2 40 127-180 16-55 (221)
398 3ip1_A Alcohol dehydrogenase, 79.4 10 0.00035 36.7 10.2 42 115-156 215-257 (404)
399 2py6_A Methyltransferase FKBM; 79.2 2 6.8E-05 42.5 5.1 63 114-177 227-292 (409)
400 3k31_A Enoyl-(acyl-carrier-pro 79.0 5.4 0.00019 36.9 7.8 46 127-180 48-93 (296)
401 1uuf_A YAHK, zinc-type alcohol 78.9 2.4 8.2E-05 40.8 5.5 41 115-156 196-237 (369)
402 4dqx_A Probable oxidoreductase 78.9 12 0.0004 34.3 10.0 55 116-180 29-86 (277)
403 3av4_A DNA (cytosine-5)-methyl 78.9 1.5 5.3E-05 50.3 4.7 58 114-180 851-908 (1330)
404 1wma_A Carbonyl reductase [NAD 78.3 4.7 0.00016 35.5 6.9 47 127-180 20-67 (276)
405 4dvj_A Putative zinc-dependent 78.2 3.3 0.00011 39.6 6.2 40 116-156 174-216 (363)
406 3tox_A Short chain dehydrogena 78.2 6 0.00021 36.4 7.8 58 116-180 10-70 (280)
407 1oaa_A Sepiapterin reductase; 78.1 17 0.00058 32.3 10.6 59 117-180 9-73 (259)
408 2pnf_A 3-oxoacyl-[acyl-carrier 78.0 6.9 0.00024 34.2 7.8 59 116-180 9-70 (248)
409 2eih_A Alcohol dehydrogenase; 77.6 5.2 0.00018 37.6 7.3 41 115-156 168-210 (343)
410 1vl8_A Gluconate 5-dehydrogena 77.4 13 0.00043 33.7 9.6 59 116-180 23-84 (267)
411 1lss_A TRK system potassium up 77.3 24 0.00082 27.6 11.1 47 122-180 10-60 (140)
412 3cxt_A Dehydrogenase with diff 77.2 14 0.00049 34.0 10.1 58 116-180 36-96 (291)
413 2pd4_A Enoyl-[acyl-carrier-pro 77.2 6.5 0.00022 35.6 7.6 47 126-180 23-69 (275)
414 3ps9_A TRNA 5-methylaminomethy 77.2 2.5 8.5E-05 43.9 5.3 44 112-155 65-123 (676)
415 4a2c_A Galactitol-1-phosphate 77.0 24 0.00081 32.8 11.6 43 114-156 161-204 (346)
416 1g0o_A Trihydroxynaphthalene r 76.9 12 0.00041 33.9 9.4 58 116-180 31-92 (283)
417 3ctm_A Carbonyl reductase; alc 76.9 4.8 0.00016 36.2 6.6 58 116-180 36-96 (279)
418 3sx2_A Putative 3-ketoacyl-(ac 76.6 6.5 0.00022 35.5 7.4 58 116-180 15-87 (278)
419 1qsg_A Enoyl-[acyl-carrier-pro 76.5 9.6 0.00033 34.2 8.5 43 127-180 27-72 (265)
420 1yde_A Retinal dehydrogenase/r 76.4 7.7 0.00026 35.2 7.9 54 116-180 11-67 (270)
421 3f1l_A Uncharacterized oxidore 76.4 11 0.00038 33.6 8.9 59 116-180 14-77 (252)
422 1ja9_A 4HNR, 1,3,6,8-tetrahydr 76.0 9 0.00031 34.0 8.1 58 116-180 23-84 (274)
423 3qiv_A Short-chain dehydrogena 75.9 5.7 0.00019 35.2 6.7 58 116-180 11-71 (253)
424 4da9_A Short-chain dehydrogena 75.8 8.9 0.0003 35.1 8.2 58 116-180 31-92 (280)
425 3pk0_A Short-chain dehydrogena 75.8 5.1 0.00017 36.2 6.4 59 116-180 12-73 (262)
426 4fn4_A Short chain dehydrogena 75.7 4.5 0.00015 37.7 6.2 58 117-181 10-70 (254)
427 3gms_A Putative NADPH:quinone 75.7 5.1 0.00017 37.7 6.6 41 115-156 146-188 (340)
428 2zb4_A Prostaglandin reductase 75.4 9.5 0.00032 36.0 8.5 41 115-156 162-205 (357)
429 3imf_A Short chain dehydrogena 75.4 6 0.0002 35.5 6.8 58 116-180 8-68 (257)
430 3oid_A Enoyl-[acyl-carrier-pro 75.4 12 0.00042 33.6 8.9 57 117-180 7-67 (258)
431 3lf2_A Short chain oxidoreduct 75.1 5.5 0.00019 36.0 6.5 60 116-180 10-72 (265)
432 3tzq_B Short-chain type dehydr 75.1 11 0.00039 34.1 8.6 55 116-180 13-70 (271)
433 2b5w_A Glucose dehydrogenase; 75.0 6.8 0.00023 37.1 7.4 41 115-156 174-221 (357)
434 3ek2_A Enoyl-(acyl-carrier-pro 74.9 8 0.00027 34.3 7.4 57 116-180 16-77 (271)
435 2a4k_A 3-oxoacyl-[acyl carrier 74.8 21 0.00071 32.3 10.3 55 116-180 8-65 (263)
436 3ged_A Short-chain dehydrogena 74.7 4.8 0.00016 37.3 6.1 50 120-180 8-60 (247)
437 3rih_A Short chain dehydrogena 74.5 7.8 0.00027 36.0 7.5 59 116-180 43-104 (293)
438 3iei_A Leucine carboxyl methyl 74.4 17 0.00059 35.3 10.2 120 115-279 92-232 (334)
439 3r6d_A NAD-dependent epimerase 74.4 9.6 0.00033 32.9 7.7 43 127-180 21-65 (221)
440 3l4b_C TRKA K+ channel protien 74.4 22 0.00075 31.0 10.1 47 122-180 6-56 (218)
441 1yxm_A Pecra, peroxisomal tran 74.3 6.4 0.00022 35.8 6.8 63 116-180 20-85 (303)
442 2wyu_A Enoyl-[acyl carrier pro 74.3 8.3 0.00028 34.6 7.4 56 117-180 11-71 (261)
443 1yb5_A Quinone oxidoreductase; 74.2 8 0.00028 36.7 7.7 41 115-156 172-214 (351)
444 1vj0_A Alcohol dehydrogenase, 74.1 5.2 0.00018 38.4 6.4 42 115-156 197-239 (380)
445 3uve_A Carveol dehydrogenase ( 73.7 11 0.00039 34.1 8.3 58 116-180 13-89 (286)
446 2pd6_A Estradiol 17-beta-dehyd 73.7 14 0.00048 32.5 8.7 62 116-180 9-76 (264)
447 2qrv_B DNA (cytosine-5)-methyl 73.6 5.9 0.0002 37.1 6.4 42 234-277 80-130 (230)
448 3sju_A Keto reductase; short-c 73.3 7.3 0.00025 35.6 6.9 58 116-180 26-86 (279)
449 3lyl_A 3-oxoacyl-(acyl-carrier 73.3 12 0.0004 33.0 8.0 58 116-180 7-67 (247)
450 4eye_A Probable oxidoreductase 72.9 6.5 0.00022 37.1 6.6 41 115-156 161-203 (342)
451 3ggo_A Prephenate dehydrogenas 72.9 19 0.00065 34.1 9.9 40 117-156 36-77 (314)
452 3qwb_A Probable quinone oxidor 72.5 9.2 0.00031 35.7 7.5 41 115-156 150-192 (334)
453 4eez_A Alcohol dehydrogenase 1 72.1 13 0.00046 34.5 8.6 42 115-156 165-207 (348)
454 3tpc_A Short chain alcohol deh 71.9 10 0.00035 33.8 7.4 55 116-180 9-66 (257)
455 3v8b_A Putative dehydrogenase, 71.9 7.7 0.00026 35.6 6.7 58 116-180 30-90 (283)
456 1wly_A CAAR, 2-haloacrylate re 71.9 10 0.00034 35.4 7.6 41 115-156 147-189 (333)
457 1rjw_A ADH-HT, alcohol dehydro 71.8 10 0.00034 35.7 7.6 40 115-155 166-206 (339)
458 3op4_A 3-oxoacyl-[acyl-carrier 71.8 8.7 0.0003 34.3 6.9 55 116-180 11-68 (248)
459 1id1_A Putative potassium chan 71.8 38 0.0013 27.7 10.5 49 122-180 9-62 (153)
460 2bgk_A Rhizome secoisolaricire 71.6 21 0.00071 31.7 9.4 57 116-180 18-77 (278)
461 2z1n_A Dehydrogenase; reductas 71.5 16 0.00054 32.6 8.6 60 116-180 9-71 (260)
462 3jyn_A Quinone oxidoreductase; 71.2 10 0.00035 35.3 7.5 41 115-156 142-184 (325)
463 3t7c_A Carveol dehydrogenase; 70.7 11 0.00038 34.7 7.6 58 116-180 30-102 (299)
464 4egf_A L-xylulose reductase; s 70.6 7 0.00024 35.3 6.1 59 116-180 22-83 (266)
465 4g81_D Putative hexonate dehyd 70.5 5.8 0.0002 37.0 5.6 57 117-180 12-71 (255)
466 3i1j_A Oxidoreductase, short c 70.4 34 0.0012 29.8 10.4 59 116-180 16-79 (247)
467 2jah_A Clavulanic acid dehydro 70.0 9.5 0.00032 34.0 6.7 58 116-180 9-69 (247)
468 2rhc_B Actinorhodin polyketide 69.6 14 0.00047 33.6 7.9 58 116-180 24-84 (277)
469 1qor_A Quinone oxidoreductase; 69.5 9.4 0.00032 35.4 6.8 41 115-156 142-184 (327)
470 3guy_A Short-chain dehydrogena 69.5 41 0.0014 29.2 10.7 51 120-180 7-60 (230)
471 3sc4_A Short chain dehydrogena 69.4 13 0.00044 34.0 7.6 58 116-180 11-78 (285)
472 1pdo_A Mannose permease; phosp 69.3 7.4 0.00025 32.6 5.5 38 250-287 39-77 (135)
473 3v2h_A D-beta-hydroxybutyrate 69.3 19 0.00065 32.9 8.8 59 116-180 27-89 (281)
474 1yo6_A Putative carbonyl reduc 69.2 10 0.00035 32.8 6.7 56 117-180 6-64 (250)
475 4dyv_A Short-chain dehydrogena 69.0 9.9 0.00034 34.8 6.8 55 116-180 30-87 (272)
476 3v2g_A 3-oxoacyl-[acyl-carrier 68.9 21 0.0007 32.5 8.9 58 116-180 33-94 (271)
477 2dq4_A L-threonine 3-dehydroge 68.9 7.6 0.00026 36.5 6.1 40 115-155 166-207 (343)
478 3nyw_A Putative oxidoreductase 68.7 8.3 0.00028 34.6 6.1 61 116-180 9-72 (250)
479 2aef_A Calcium-gated potassium 68.4 39 0.0013 29.6 10.4 46 122-180 15-62 (234)
480 3pi7_A NADH oxidoreductase; gr 68.3 12 0.00043 35.1 7.5 35 121-156 173-208 (349)
481 3nx4_A Putative oxidoreductase 68.1 8.4 0.00029 35.6 6.2 39 117-156 150-190 (324)
482 2j8z_A Quinone oxidoreductase; 68.1 11 0.00039 35.6 7.2 40 115-155 164-205 (354)
483 3uf0_A Short-chain dehydrogena 67.9 20 0.0007 32.6 8.7 57 116-180 33-92 (273)
484 3awd_A GOX2181, putative polyo 67.4 10 0.00035 33.4 6.3 58 116-180 15-75 (260)
485 1e7w_A Pteridine reductase; di 67.3 20 0.00069 32.8 8.5 59 116-180 11-73 (291)
486 3asu_A Short-chain dehydrogena 67.0 23 0.00078 31.6 8.7 45 126-180 15-59 (248)
487 3ipr_A PTS system, IIA compone 67.0 7.5 0.00026 33.4 5.2 37 251-287 40-77 (150)
488 2h7i_A Enoyl-[acyl-carrier-pro 66.6 13 0.00044 33.5 7.0 55 116-180 9-69 (269)
489 1yb1_A 17-beta-hydroxysteroid 66.5 13 0.00046 33.4 7.1 58 116-180 33-93 (272)
490 3ioy_A Short-chain dehydrogena 66.4 12 0.00041 35.1 6.9 60 116-180 10-72 (319)
491 4fgs_A Probable dehydrogenase 66.4 8.4 0.00029 36.2 5.8 56 116-181 31-89 (273)
492 3gaf_A 7-alpha-hydroxysteroid 66.2 10 0.00036 34.0 6.2 58 116-180 14-74 (256)
493 2x9g_A PTR1, pteridine reducta 66.0 24 0.00082 32.0 8.7 57 116-178 25-85 (288)
494 2zig_A TTHA0409, putative modi 65.8 4 0.00014 38.1 3.5 22 255-277 76-97 (297)
495 2nwq_A Probable short-chain de 65.8 20 0.00068 32.7 8.1 56 117-180 24-82 (272)
496 2pv0_B DNA (cytosine-5)-methyl 65.4 49 0.0017 33.2 11.4 78 234-313 236-322 (386)
497 1xq1_A Putative tropinone redu 65.2 33 0.0011 30.3 9.3 58 116-180 16-76 (266)
498 3bed_A PTS system, IIA compone 65.1 7.6 0.00026 32.9 4.8 86 251-359 44-130 (142)
499 2c0c_A Zinc binding alcohol de 64.9 27 0.00091 33.2 9.1 40 115-155 165-206 (362)
500 3g0o_A 3-hydroxyisobutyrate de 64.8 19 0.00064 33.4 7.8 38 117-156 10-49 (303)
No 1
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.93 E-value=1.3e-24 Score=198.49 Aligned_cols=208 Identities=17% Similarity=0.148 Sum_probs=154.8
Q ss_pred hHHHHHHhhcC--C--hhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcc
Q 045407 83 KFLLYQQSVQS--P--KGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNL 158 (382)
Q Consensus 83 ~~~LYd~~vq~--p--~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~ 158 (382)
...+|+..+.. + ...+.++.+++..+.. .+.+|||+|||||.++..|++.+. +|+|+|+|++||+.|+++.
T Consensus 18 ~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~- 92 (263)
T 3pfg_A 18 IAELYDLVHQGKGKDYHREAADLAALVRRHSP--KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRN- 92 (263)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHC-
T ss_pred HHHHHHHHhhcCCCCHHHHHHHHHHHHHhhCC--CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhC-
Confidence 45678887752 2 2334667777766432 246899999999999999999985 6999999999999999985
Q ss_pred ccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccE
Q 045407 159 NKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDI 238 (382)
Q Consensus 159 ~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDi 238 (382)
.++.++++|+.+++ + ...||+
T Consensus 93 --------~~~~~~~~d~~~~~-----------------~----------------------------------~~~fD~ 113 (263)
T 3pfg_A 93 --------PDAVLHHGDMRDFS-----------------L----------------------------------GRRFSA 113 (263)
T ss_dssp --------TTSEEEECCTTTCC-----------------C----------------------------------SCCEEE
T ss_pred --------CCCEEEECChHHCC-----------------c----------------------------------cCCcCE
Confidence 26899999998766 1 467999
Q ss_pred EEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchh-hhhHh----hhccCCeEEEEeecccccccceEE
Q 045407 239 ICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSE-QKLRL----QRRFANFTYVWEQAEFDIIERKTR 313 (382)
Q Consensus 239 V~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e-~kl~~----~R~~~~~tyvWeq~~fD~~~~~~r 313 (382)
|+|...++.|+.+.+++..+|+.++++|+ |||+||++.+...... ..... ......+..+|.... ......
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 189 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFAAHVL-PDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSR---EGEATR 189 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHHHTEE-EEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEE---ETTEEE
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHHHhcC-CCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEe---cCcEEE
Confidence 99998899999999999999999999999 9999999865322111 00000 011123556676422 345677
Q ss_pred EEEEEEeecccceeeee-eeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 314 ISLHFHLQKEQKKLRHA-FSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 314 i~L~F~~~~~~~~lr~~-fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
+.++|++.++.+.+++. ..+++|+|+++||+++|++|||+.+.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 235 (263)
T 3pfg_A 190 IEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMP 235 (263)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred EEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEee
Confidence 78888876655344433 3366899999999999999999999885
No 2
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.92 E-value=5.1e-24 Score=190.31 Aligned_cols=211 Identities=18% Similarity=0.214 Sum_probs=154.4
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC
Q 045407 84 FLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA 163 (382)
Q Consensus 84 ~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~ 163 (382)
...|+..+....+. .++. ++..++.. ..+|||+|||||.++..+++. .+|+|+|+|+.||+.|+++...
T Consensus 8 a~~yd~~~~~~~~~-~~~~-~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~---- 76 (243)
T 3d2l_A 8 AYVYDELMQDVPYP-EWVA-WVLEQVEP--GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAME---- 76 (243)
T ss_dssp THHHHHHTTTCCHH-HHHH-HHHHHSCT--TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHH----
T ss_pred HHHHHHhhhcccHH-HHHH-HHHHHcCC--CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhh----
Confidence 46788887655443 2333 33333321 357999999999999999988 4799999999999999998532
Q ss_pred CCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc
Q 045407 164 DGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN 243 (382)
Q Consensus 164 d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn 243 (382)
...++.++++|+.+++ + ..+||+|++.+
T Consensus 77 -~~~~~~~~~~d~~~~~-----------------~----------------------------------~~~fD~v~~~~ 104 (243)
T 3d2l_A 77 -TNRHVDFWVQDMRELE-----------------L----------------------------------PEPVDAITILC 104 (243)
T ss_dssp -TTCCCEEEECCGGGCC-----------------C----------------------------------SSCEEEEEECT
T ss_pred -cCCceEEEEcChhhcC-----------------C----------------------------------CCCcCEEEEeC
Confidence 1247899999987654 1 35699999988
Q ss_pred chhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHh---hhccCCeEEEEeecccccccceEEEEEEEEe
Q 045407 244 YSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRL---QRRFANFTYVWEQAEFDIIERKTRISLHFHL 320 (382)
Q Consensus 244 ~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~---~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~ 320 (382)
+++.|+.+.+++...|+.++++|+ |||+||+++.+.......+.. ....+++.++|.. .++.....+...+++++
T Consensus 105 ~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 182 (243)
T 3d2l_A 105 DSLNYLQTEADVKQTFDSAARLLT-DGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFA-DPGEEPLSVVHELTFFI 182 (243)
T ss_dssp TGGGGCCSHHHHHHHHHHHHHHEE-EEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEE-EECSSTTEEEEEEEEEE
T ss_pred CchhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEe-ecCccccEEEEEEEEEE
Confidence 899999999999999999999999 999999998753221110000 0011456778886 45555667777888877
Q ss_pred ecccceeeee-eeeeEEecCHHHHHHHHHHcCCcEEEEEe
Q 045407 321 QKEQKKLRHA-FSYNWRLWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 321 ~~~~~~lr~~-fsy~~Rlysl~EI~d~LeeAGF~~V~v~~ 359 (382)
..+.+.+.+. ..++.|.|+++||+.+|++|||+.+.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 222 (243)
T 3d2l_A 183 EGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTG 222 (243)
T ss_dssp ECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEec
Confidence 6544344332 24677999999999999999999999974
No 3
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.92 E-value=1.2e-23 Score=187.39 Aligned_cols=211 Identities=16% Similarity=0.150 Sum_probs=154.7
Q ss_pred HHHHHHhhc-CChhh--HHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc
Q 045407 84 FLLYQQSVQ-SPKGD--ISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK 160 (382)
Q Consensus 84 ~~LYd~~vq-~p~~D--i~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k 160 (382)
...|+..+. ...++ +.++.+++..+ +..+.+|||+|||||.++..|++.+. +|+|+|+|+.||+.|+++...
T Consensus 7 a~~yd~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~- 81 (246)
T 1y8c_A 7 AHIYDKLIRADVDYKKWSDFIIEKCVEN--NLVFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRS- 81 (246)
T ss_dssp HHHHHHHTTCSCCHHHHHHHHHHHHHTT--TCCTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHccccccHHHHHHHHHHHHHHh--CCCCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhh-
Confidence 356877765 33333 35666666543 22456899999999999999999985 799999999999999998532
Q ss_pred ccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEE
Q 045407 161 VGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIIC 240 (382)
Q Consensus 161 l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~ 240 (382)
. ..++.++++|+.+++ + ..+||+|+
T Consensus 82 ---~-~~~~~~~~~d~~~~~-----------------~----------------------------------~~~fD~v~ 106 (246)
T 1y8c_A 82 ---Q-GLKPRLACQDISNLN-----------------I----------------------------------NRKFDLIT 106 (246)
T ss_dssp ---T-TCCCEEECCCGGGCC-----------------C----------------------------------SCCEEEEE
T ss_pred ---c-CCCeEEEecccccCC-----------------c----------------------------------cCCceEEE
Confidence 1 127899999987654 1 25799999
Q ss_pred EccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHh---hhccCCeEEEEeecccccccceEEEEEE
Q 045407 241 AFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRL---QRRFANFTYVWEQAEFDIIERKTRISLH 317 (382)
Q Consensus 241 afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~---~R~~~~~tyvWeq~~fD~~~~~~ri~L~ 317 (382)
+.++++.|+.+.+++...|+.++++|+ |||+||+++.+.......+.. .....++.++|... .....+...++
T Consensus 107 ~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 182 (246)
T 1y8c_A 107 CCLDSTNYIIDSDDLKKYFKAVSNHLK-EGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQ---FEDDLVSMYIS 182 (246)
T ss_dssp ECTTGGGGCCSHHHHHHHHHHHHTTEE-EEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEE---EETTEEEEEEE
T ss_pred EcCccccccCCHHHHHHHHHHHHHhcC-CCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecc---cCCceEEEEEE
Confidence 988799999888999999999999999 999999998753221110000 00124567788764 33455667777
Q ss_pred EEeecccceeeee-eeeeEEecCHHHHHHHHHHcCCcEEEEEe
Q 045407 318 FHLQKEQKKLRHA-FSYNWRLWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 318 F~~~~~~~~lr~~-fsy~~Rlysl~EI~d~LeeAGF~~V~v~~ 359 (382)
|+...+. .+++. ..+++|.|++++++++|++|||+.++++.
T Consensus 183 ~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 224 (246)
T 1y8c_A 183 FFVRDGE-FYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVD 224 (246)
T ss_dssp EEEECSS-SEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEecCC-cccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEc
Confidence 7765443 44333 34678999999999999999999999974
No 4
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.91 E-value=9.8e-23 Score=181.59 Aligned_cols=207 Identities=16% Similarity=0.141 Sum_probs=146.9
Q ss_pred HHHHHHhhc----CChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccc
Q 045407 84 FLLYQQSVQ----SPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLN 159 (382)
Q Consensus 84 ~~LYd~~vq----~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~ 159 (382)
-..|+..+. .......++..++..+. ..+.+|||+|||||.++..|++.++ +|+|+|+|+.||+.|+++.
T Consensus 9 a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-- 82 (239)
T 3bxo_A 9 ADVYDLFYLGRGKDYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-- 82 (239)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC--
T ss_pred HHHHHHHhhccHhhHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC--
Confidence 456666653 23344467777776654 3356899999999999999999986 7999999999999999874
Q ss_pred cccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEE
Q 045407 160 KVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDII 239 (382)
Q Consensus 160 kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV 239 (382)
.++.++++|+.+++ + ..+||+|
T Consensus 83 -------~~~~~~~~d~~~~~-----------------~----------------------------------~~~~D~v 104 (239)
T 3bxo_A 83 -------PDATLHQGDMRDFR-----------------L----------------------------------GRKFSAV 104 (239)
T ss_dssp -------TTCEEEECCTTTCC-----------------C----------------------------------SSCEEEE
T ss_pred -------CCCEEEECCHHHcc-----------------c----------------------------------CCCCcEE
Confidence 25889999997665 1 3579999
Q ss_pred EEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhh---ccCC--eEEEEeecccccccceEEE
Q 045407 240 CAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQR---RFAN--FTYVWEQAEFDIIERKTRI 314 (382)
Q Consensus 240 ~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R---~~~~--~tyvWeq~~fD~~~~~~ri 314 (382)
+|.+.++.|+.+.+++..+|++++++|+ |||+||++.+............. ..++ +.+++ .+++......+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 180 (239)
T 3bxo_A 105 VSMFSSVGYLKTTEELGAAVASFAEHLE-PGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVS---HSVREGNATRM 180 (239)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHTEE-EEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEE---EEEEETTEEEE
T ss_pred EEcCchHhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEeccCcccccccceEeeEEecCCceEEEEE---EEecCCCEEEE
Confidence 9988899999999999999999999999 99999997653221100000000 0011 12211 13444556677
Q ss_pred EEEEEeecccceeeeee-eeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 315 SLHFHLQKEQKKLRHAF-SYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 315 ~L~F~~~~~~~~lr~~f-sy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
.+++.+....+..++.. .++.|+||++||+.+|++|||+.+.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~ 225 (239)
T 3bxo_A 181 EVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLE 225 (239)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred EEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeE
Confidence 77777655332343333 356799999999999999999766654
No 5
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.91 E-value=3.4e-23 Score=187.24 Aligned_cols=214 Identities=20% Similarity=0.302 Sum_probs=143.4
Q ss_pred chHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccc
Q 045407 82 SKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKV 161 (382)
Q Consensus 82 ~~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl 161 (382)
.|..+|+...+....++.++.+++... ..+.+.+|||+|||||.++..|++.|. +|+|+|+|++||+.|+++...
T Consensus 11 ~yd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~-- 85 (252)
T 1wzn_A 11 YYDTIYRRRIERVKAEIDFVEEIFKED-AKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKE-- 85 (252)
T ss_dssp GHHHHTHHHHHTHHHHHHHHHHHHHHT-CSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH--
T ss_pred HHHHHHhcchhhhHHHHHHHHHHHHHh-cccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHh--
Confidence 345567666566677789999988764 334457899999999999999999985 799999999999999998532
Q ss_pred cCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEE
Q 045407 162 GADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICA 241 (382)
Q Consensus 162 ~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~a 241 (382)
.+.++.++++|+.+++ + ..+||+|++
T Consensus 86 ---~~~~v~~~~~d~~~~~-----------------~----------------------------------~~~fD~v~~ 111 (252)
T 1wzn_A 86 ---RNLKIEFLQGDVLEIA-----------------F----------------------------------KNEFDAVTM 111 (252)
T ss_dssp ---TTCCCEEEESCGGGCC-----------------C----------------------------------CSCEEEEEE
T ss_pred ---cCCceEEEECChhhcc-----------------c----------------------------------CCCccEEEE
Confidence 1237999999997655 1 356999999
Q ss_pred ccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhh---hHhhhccCC--eEEEEeecccccccceEEEEE
Q 045407 242 FNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQK---LRLQRRFAN--FTYVWEQAEFDIIERKTRISL 316 (382)
Q Consensus 242 fn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~k---l~~~R~~~~--~tyvWeq~~fD~~~~~~ri~L 316 (382)
.+.++.|+ ..+++..+|+.++++|+ |||+||+|+.+....... .+....... +...|. .+++......+..
T Consensus 112 ~~~~~~~~-~~~~~~~~l~~~~~~L~-pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 187 (252)
T 1wzn_A 112 FFSTIMYF-DEEDLRKLFSKVAEALK-PGGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWR--EVEPAVQKLRFKR 187 (252)
T ss_dssp CSSGGGGS-CHHHHHHHHHHHHHHEE-EEEEEEEEEEC-------CCEEEEEEETTEEEEEEEEE--EEETTTTEEEEEE
T ss_pred cCCchhcC-CHHHHHHHHHHHHHHcC-CCeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeec--ccccccceeehee
Confidence 87777776 46789999999999999 999999997531000000 000000000 111233 2223223222222
Q ss_pred EEE-eecccceeeee-eeeeEEecCHHHHHHHHHHcCCcEEEEEec
Q 045407 317 HFH-LQKEQKKLRHA-FSYNWRLWSLPEIKDCLEEAGFRSVHFWLR 360 (382)
Q Consensus 317 ~F~-~~~~~~~lr~~-fsy~~Rlysl~EI~d~LeeAGF~~V~v~~r 360 (382)
... +..+. .+++. ...+.|+|+++|++ +|++|||+.+++|..
T Consensus 188 ~~~~~~~~g-~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~ 231 (252)
T 1wzn_A 188 LVQILRPNG-EVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGN 231 (252)
T ss_dssp EEEEECTTS-CEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEET
T ss_pred eeeecccCC-ceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecc
Confidence 111 22222 33322 23467999999998 999999999999853
No 6
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.88 E-value=8.3e-22 Score=184.33 Aligned_cols=206 Identities=17% Similarity=0.101 Sum_probs=131.2
Q ss_pred HHHHHhhcC--ChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc
Q 045407 85 LLYQQSVQS--PKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG 162 (382)
Q Consensus 85 ~LYd~~vq~--p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~ 162 (382)
.+|+..+.+ +...+..+...+ . ..+.+|||+|||||.++..|++.|. +|+|||+|+.||+.|+++...
T Consensus 57 ~~y~~~~~~~~~~~~~~~~~~~~----~-~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~--- 126 (299)
T 3g2m_A 57 DTYRDLIQDADGTSEAREFATRT----G-PVSGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAE--- 126 (299)
T ss_dssp ---------CCCHHHHHHHHHHH----C-CCCSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHT---
T ss_pred HHHHHHhcccCccHHHHHHHHhh----C-CCCCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhh---
Confidence 467777653 333333333332 2 2244799999999999999999985 699999999999999998532
Q ss_pred CCCC---cceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEE
Q 045407 163 ADGY---SRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDII 239 (382)
Q Consensus 163 ~d~~---~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV 239 (382)
.+. .+|.++++|+.+++ + ..+||+|
T Consensus 127 -~~~~~~~~v~~~~~d~~~~~-----------------~----------------------------------~~~fD~v 154 (299)
T 3g2m_A 127 -APADVRDRCTLVQGDMSAFA-----------------L----------------------------------DKRFGTV 154 (299)
T ss_dssp -SCHHHHTTEEEEECBTTBCC-----------------C----------------------------------SCCEEEE
T ss_pred -cccccccceEEEeCchhcCC-----------------c----------------------------------CCCcCEE
Confidence 110 47999999998765 1 4679999
Q ss_pred EEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhh----hccCCeEEE-EeecccccccceEEE
Q 045407 240 CAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQ----RRFANFTYV-WEQAEFDIIERKTRI 314 (382)
Q Consensus 240 ~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~----R~~~~~tyv-Weq~~fD~~~~~~ri 314 (382)
++.+.++.|+ +++++..+|+.++++|+ |||+||+.+++........... ....+..+. |. .+.+ .....
T Consensus 155 ~~~~~~~~~~-~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~--~~~~~ 228 (299)
T 3g2m_A 155 VISSGSINEL-DEADRRGLYASVREHLE-PGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHV--RHLP--AEEIQ 228 (299)
T ss_dssp EECHHHHTTS-CHHHHHHHHHHHHHHEE-EEEEEEEEEECCHHHHSCCCCC-------------CCE--EEEE--EEEEE
T ss_pred EECCcccccC-CHHHHHHHHHHHHHHcC-CCcEEEEEeecCccccccchhccceeecCCCcEEEEEE--EEec--cccEE
Confidence 9888788775 45789999999999999 9999999887643321100000 000122222 32 1222 12233
Q ss_pred EEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 315 SLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 315 ~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
.++|+.......-...+.+++|+|+++||+.+|++|||+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 272 (299)
T 3g2m_A 229 EITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQT 272 (299)
T ss_dssp EEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEE
Confidence 45554332211112346678899999999999999999999874
No 7
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.88 E-value=1.3e-21 Score=181.02 Aligned_cols=226 Identities=11% Similarity=0.139 Sum_probs=143.5
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCC
Q 045407 85 LLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGAD 164 (382)
Q Consensus 85 ~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d 164 (382)
.+|+..+.........+..++...+....+.+|||+|||||.++..|++.|. +|+|+|+|+.||++|+++........
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~ 106 (293)
T 3thr_A 29 RVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEP 106 (293)
T ss_dssp HHHHHHHTCCSCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSH
T ss_pred HHHHHHHhcCcchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhccccc
Confidence 3788777555555544444444333323356899999999999999999986 79999999999999998753211111
Q ss_pred CCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccc
Q 045407 165 GYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNY 244 (382)
Q Consensus 165 ~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~ 244 (382)
...++.+.++|+.+++. ++ +...+||+|+|...
T Consensus 107 ~~~~~~~~~~d~~~~~~-------------~~----------------------------------~~~~~fD~V~~~g~ 139 (293)
T 3thr_A 107 AFDKWVIEEANWLTLDK-------------DV----------------------------------PAGDGFDAVICLGN 139 (293)
T ss_dssp HHHTCEEEECCGGGHHH-------------HS----------------------------------CCTTCEEEEEECTT
T ss_pred ccceeeEeecChhhCcc-------------cc----------------------------------ccCCCeEEEEEcCh
Confidence 22468889999876541 00 12467999999866
Q ss_pred hhcccCC----hhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhcc-CCeEEEEee--------cc--ccccc
Q 045407 245 SCCCLHK----RADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRF-ANFTYVWEQ--------AE--FDIIE 309 (382)
Q Consensus 245 S~~yL~~----r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~-~~~tyvWeq--------~~--fD~~~ 309 (382)
++.|+.+ .++...+|++++++|+ |||+|++.+.+.... ...... +....+|.. .. .+...
T Consensus 140 ~l~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 214 (293)
T 3thr_A 140 SFAHLPDSKGDQSEHRLALKNIASMVR-PGGLLVIDHRNYDYI----LSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKA 214 (293)
T ss_dssp CGGGSCCSSSSSHHHHHHHHHHHHTEE-EEEEEEEEEECHHHH----HHHTCCCSSCCSSBCCCSCEEEEEEEEEETTEE
T ss_pred HHhhcCccccCHHHHHHHHHHHHHHcC-CCeEEEEEeCCHHHH----hhcCCCCCccceeeccccccccccceEEEcCCc
Confidence 8999888 7889999999999999 999999987642111 111111 111111110 01 11112
Q ss_pred ceEEEEEEEEeecccc---eeeeeeeeeEEecCHHHHHHHHHHc--CCcEEEEEeccCchh
Q 045407 310 RKTRISLHFHLQKEQK---KLRHAFSYNWRLWSLPEIKDCLEEA--GFRSVHFWLREMPDA 365 (382)
Q Consensus 310 ~~~ri~L~F~~~~~~~---~lr~~fsy~~Rlysl~EI~d~LeeA--GF~~V~v~~r~~~~~ 365 (382)
...++..+|+++.... .....|....+-++..+++++|++| ||..|.+|. ++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~l~~af~GF~~v~~~g-df~~~ 274 (293)
T 3thr_A 215 HMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLG-DFKPY 274 (293)
T ss_dssp EEEEEEEEEEEC------CCEEEEEEEEECCCCHHHHHHHHHHTTTTCEEEEEEE-TTEEC
T ss_pred cEEEEEEEEecCCccccCCCCcceeeeecCHHHHHHHHHHHHHHhcCCceEEEec-ccccC
Confidence 2345566665543321 1112223233444678999999999 999999995 55443
No 8
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.86 E-value=9.8e-22 Score=184.78 Aligned_cols=191 Identities=13% Similarity=0.189 Sum_probs=125.9
Q ss_pred ChhhH--HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC--CCCeEEEEeCCHHHHHHHHHhccccccCCCCcce
Q 045407 94 PKGDI--SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD--SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRI 169 (382)
Q Consensus 94 p~~Di--~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g--~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI 169 (382)
|-|+. ..+..+..+|+. ...+|||+|||||.++..|+++. +..+|+|||+|++||+.|+++... . ....+|
T Consensus 51 P~Y~~~~~~i~~l~~~~~~--~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~-~--~~~~~v 125 (261)
T 4gek_A 51 PGYSNIISMIGMLAERFVQ--PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA-Y--KAPTPV 125 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCC--TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT-S--CCSSCE
T ss_pred CCHHHHHHHHHHHHHHhCC--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh-h--ccCceE
Confidence 54543 455555565542 12479999999999999999874 345899999999999999998532 1 123589
Q ss_pred EEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc
Q 045407 170 SLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL 249 (382)
Q Consensus 170 ~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL 249 (382)
.++++|+++++ .+.+|+|++.+ ++.|+
T Consensus 126 ~~~~~D~~~~~----------------------------------------------------~~~~d~v~~~~-~l~~~ 152 (261)
T 4gek_A 126 DVIEGDIRDIA----------------------------------------------------IENASMVVLNF-TLQFL 152 (261)
T ss_dssp EEEESCTTTCC----------------------------------------------------CCSEEEEEEES-CGGGS
T ss_pred EEeeccccccc----------------------------------------------------ccccccceeee-eeeec
Confidence 99999998776 46799998865 66665
Q ss_pred CChhHHHHHHHHHHhhccCCCcEEEE-eccCCCch-hhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeeccccee
Q 045407 250 HKRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSS-EQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKL 327 (382)
Q Consensus 250 ~~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~-e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~l 327 (382)
. .++...+|++++++|+ |||+||+ |....... ........ ..++ ...+ .|.+..- . ..
T Consensus 153 ~-~~~~~~~l~~i~~~Lk-pGG~lii~e~~~~~~~~~~~~~~~~-~~~~--~~~~-g~s~~ei----------~----~~ 212 (261)
T 4gek_A 153 E-PSERQALLDKIYQGLN-PGGALVLSEKFSFEDAKVGELLFNM-HHDF--KRAN-GYSELEI----------S----QK 212 (261)
T ss_dssp C-HHHHHHHHHHHHHHEE-EEEEEEEEEEBCCSSHHHHHHHHHH-HHHH--HHHT-TGGGSTT----------H----HH
T ss_pred C-chhHhHHHHHHHHHcC-CCcEEEEEeccCCCCHHHHHHHHHH-HHHH--HHHc-CCCHHHH----------H----HH
Confidence 4 4677889999999999 9999998 66543221 11110000 0000 0000 0100000 0 00
Q ss_pred eeeeeeeEEecCHHHHHHHHHHcCCcEEEEEeccC
Q 045407 328 RHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWLREM 362 (382)
Q Consensus 328 r~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~r~~ 362 (382)
+...+..++.+|+++++.+|++|||+.|.+|++.+
T Consensus 213 ~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~ 247 (261)
T 4gek_A 213 RSMLENVMLTDSVETHKARLHKAGFEHSELWFQCF 247 (261)
T ss_dssp HHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEET
T ss_pred HhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEec
Confidence 11122335789999999999999999999998755
No 9
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.83 E-value=7.3e-20 Score=165.86 Aligned_cols=218 Identities=13% Similarity=0.072 Sum_probs=130.4
Q ss_pred chHHHHHHhhcCChh-hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc
Q 045407 82 SKFLLYQQSVQSPKG-DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK 160 (382)
Q Consensus 82 ~~~~LYd~~vq~p~~-Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k 160 (382)
..+..|...-....+ ........+...++...+.+|||+|||||.++..+++.++. +|+|+|+|+.||+.|+++..
T Consensus 12 ~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~-- 88 (253)
T 3g5l_A 12 HFFEQYSQMPRSKEGLKAAGEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT-- 88 (253)
T ss_dssp -------------CHHHHHHHHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC--
T ss_pred HHHHHHHHhhcccccccchhhHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc--
Confidence 344555554333222 22222233333344344678999999999999999999874 89999999999999999852
Q ss_pred ccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEE
Q 045407 161 VGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIIC 240 (382)
Q Consensus 161 l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~ 240 (382)
..++.++++|+.+++ +....||+|+
T Consensus 89 -----~~~~~~~~~d~~~~~--------------------------------------------------~~~~~fD~v~ 113 (253)
T 3g5l_A 89 -----SPVVCYEQKAIEDIA--------------------------------------------------IEPDAYNVVL 113 (253)
T ss_dssp -----CTTEEEEECCGGGCC--------------------------------------------------CCTTCEEEEE
T ss_pred -----cCCeEEEEcchhhCC--------------------------------------------------CCCCCeEEEE
Confidence 247999999987655 1246799999
Q ss_pred EccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhh---hHhhhccCCeEEEEeecccccccceEEEEEE
Q 045407 241 AFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQK---LRLQRRFANFTYVWEQAEFDIIERKTRISLH 317 (382)
Q Consensus 241 afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~k---l~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~ 317 (382)
|.+ ++.++ .++..+|+.++++|+ |||+||+.+......... ...........+.|.. .++...+ ...
T Consensus 114 ~~~-~l~~~---~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~ 183 (253)
T 3g5l_A 114 SSL-ALHYI---ASFDDICKKVYINLK-SSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDR-YFNESMR----TSH 183 (253)
T ss_dssp EES-CGGGC---SCHHHHHHHHHHHEE-EEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECC-TTCCCEE----EEE
T ss_pred Ech-hhhhh---hhHHHHHHHHHHHcC-CCcEEEEEeCCCccccCccccceeccCCceEEEEecc-ccccceE----EEe
Confidence 987 77776 457889999999999 999999976531110000 0000000112333443 2221111 011
Q ss_pred EEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEEeccCchhhhhccccCcCcccc
Q 045407 318 FHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWLREMPDAREMRNTEGLGGFSR 379 (382)
Q Consensus 318 F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~r~~~~~~~~~~~~~~~~~~~ 379 (382)
| . . .......+|+.+++.+|++|||+.+.+. ...|...... ..++....|
T Consensus 184 ~-~--~-------~~~~~~~~t~~~~~~~l~~aGF~~~~~~-e~~~~~~~~~-~~~~~~~~~ 233 (253)
T 3g5l_A 184 F-L--G-------EDVQKYHRTVTTYIQTLLKNGFQINSVI-EPEPAPELKD-LPEMQDEYR 233 (253)
T ss_dssp E-T--T-------EEEEEECCCHHHHHHHHHHTTEEEEEEE-CCCCCGGGSS-CGGGGGGGT
T ss_pred e-c--c-------ccCccEecCHHHHHHHHHHcCCeeeeee-cCCCchhhcc-ChhHHHhhc
Confidence 1 0 0 0112233499999999999999999986 4555544444 555554444
No 10
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.81 E-value=7.8e-20 Score=163.49 Aligned_cols=170 Identities=19% Similarity=0.181 Sum_probs=119.5
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|||+|||||.++..+++..+..+|+|+|+|+.|++.|+++... ..++.++++|+.+++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~----------- 105 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG------NLKVKYIEADYSKYD----------- 105 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS------CTTEEEEESCTTTCC-----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc------CCCEEEEeCchhccC-----------
Confidence 345789999999999999999997667899999999999999998522 128999999998776
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
+ ...||+|++.+ ++.++ ...+...+|++++++|+ |||
T Consensus 106 ------~----------------------------------~~~fD~v~~~~-~l~~~-~~~~~~~~l~~~~~~Lk-pgG 142 (234)
T 3dtn_A 106 ------F----------------------------------EEKYDMVVSAL-SIHHL-EDEDKKELYKRSYSILK-ESG 142 (234)
T ss_dssp ------C----------------------------------CSCEEEEEEES-CGGGS-CHHHHHHHHHHHHHHEE-EEE
T ss_pred ------C----------------------------------CCCceEEEEeC-ccccC-CHHHHHHHHHHHHHhcC-CCc
Confidence 1 26799999985 77776 44566789999999999 999
Q ss_pred EEEE-eccCCCchh-hhhHhhhccCCeEEEEeec----ccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHH
Q 045407 272 IFVM-DLYGGTSSE-QKLRLQRRFANFTYVWEQA----EFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKD 345 (382)
Q Consensus 272 iFVf-Dl~gg~s~e-~kl~~~R~~~~~tyvWeq~----~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d 345 (382)
+|++ |...+.... ... ... .|... .+.... + .. .+.+ . .+.+.++++++.+
T Consensus 143 ~l~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~--~----------~~-~~~~-~-~~~~~~~~~~~~~ 199 (234)
T 3dtn_A 143 IFINADLVHGETAFIENL-NKT-------IWRQYVENSGLTEEE--I----------AA-GYER-S-KLDKDIEMNQQLN 199 (234)
T ss_dssp EEEEEEECBCSSHHHHHH-HHH-------HHHHHHHTSSCCHHH--H----------HT-TC------CCCCCBHHHHHH
T ss_pred EEEEEEecCCCChhhhhH-HHH-------HHHHHHHhcCCCHHH--H----------HH-HHHh-c-ccccccCHHHHHH
Confidence 9998 544332221 111 000 12110 010000 0 00 0111 0 2347899999999
Q ss_pred HHHHcCCcEEEEEeccCch
Q 045407 346 CLEEAGFRSVHFWLREMPD 364 (382)
Q Consensus 346 ~LeeAGF~~V~v~~r~~~~ 364 (382)
+|++|||+.|++|++.++-
T Consensus 200 ll~~aGF~~v~~~~~~~~~ 218 (234)
T 3dtn_A 200 WLKEAGFRDVSCIYKYYQF 218 (234)
T ss_dssp HHHHTTCEEEEEEEEETTE
T ss_pred HHHHcCCCceeeeeeecce
Confidence 9999999999998876543
No 11
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=2.2e-18 Score=150.91 Aligned_cols=154 Identities=18% Similarity=0.179 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEecc
Q 045407 96 GDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGN 175 (382)
Q Consensus 96 ~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gD 175 (382)
....++..+.... +.+|||+|||||.++..|++.|. +|+|||+|++||+.|+++. .++.++++|
T Consensus 29 ~~~~~l~~~~~~~-----~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d 92 (203)
T 3h2b_A 29 PDRVLIEPWATGV-----DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQTH---------PSVTFHHGT 92 (203)
T ss_dssp TTHHHHHHHHHHC-----CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHHC---------TTSEEECCC
T ss_pred HHHHHHHHHhccC-----CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHhC---------CCCeEEeCc
Confidence 3445666666542 34699999999999999999975 6999999999999999983 368999999
Q ss_pred CCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH
Q 045407 176 VLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL 255 (382)
Q Consensus 176 V~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL 255 (382)
+.+++ + ...+||+|++.+ ++.++. .+++
T Consensus 93 ~~~~~-----------------~---------------------------------~~~~fD~v~~~~-~l~~~~-~~~~ 120 (203)
T 3h2b_A 93 ITDLS-----------------D---------------------------------SPKRWAGLLAWY-SLIHMG-PGEL 120 (203)
T ss_dssp GGGGG-----------------G---------------------------------SCCCEEEEEEES-SSTTCC-TTTH
T ss_pred ccccc-----------------c---------------------------------CCCCeEEEEehh-hHhcCC-HHHH
Confidence 87765 1 246799999975 666654 4688
Q ss_pred HHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeE
Q 045407 256 VLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNW 335 (382)
Q Consensus 256 ~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~ 335 (382)
..+++.++++|+ |||+|++-...+... . .+.. .....
T Consensus 121 ~~~l~~~~~~L~-pgG~l~i~~~~~~~~-------------~-~~~~----------------------------~~~~~ 157 (203)
T 3h2b_A 121 PDALVALRMAVE-DGGGLLMSFFSGPSL-------------E-PMYH----------------------------PVATA 157 (203)
T ss_dssp HHHHHHHHHTEE-EEEEEEEEEECCSSC-------------E-EECC----------------------------SSSCE
T ss_pred HHHHHHHHHHcC-CCcEEEEEEccCCch-------------h-hhhc----------------------------hhhhh
Confidence 999999999999 999999966542110 0 0000 01134
Q ss_pred EecCHHHHHHHHHHcCCcEEEEEec
Q 045407 336 RLWSLPEIKDCLEEAGFRSVHFWLR 360 (382)
Q Consensus 336 Rlysl~EI~d~LeeAGF~~V~v~~r 360 (382)
+.|+..+++.+|+++||+.+.+...
T Consensus 158 ~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 158 YRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp EECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHCCCcEEEEEec
Confidence 6899999999999999999998643
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.77 E-value=9.3e-18 Score=148.29 Aligned_cols=170 Identities=12% Similarity=0.086 Sum_probs=118.5
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc-ccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK-VGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k-l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++.+. +|+|+|+|+.|++.|+++.... +......++.++++|+.+++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------------ 96 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS------------ 96 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC------------
T ss_pred CCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC------------
Confidence 45799999999999999999974 7999999999999999985331 11111237899999987665
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+...+||+|++. .++.++.+..+...+++.+++.|+ |||+
T Consensus 97 --------------------------------------~~~~~~D~v~~~-~~l~~~~~~~~~~~~l~~~~~~L~-pgG~ 136 (235)
T 3sm3_A 97 --------------------------------------FHDSSFDFAVMQ-AFLTSVPDPKERSRIIKEVFRVLK-PGAY 136 (235)
T ss_dssp --------------------------------------SCTTCEEEEEEE-SCGGGCCCHHHHHHHHHHHHHHEE-EEEE
T ss_pred --------------------------------------CCCCceeEEEEc-chhhcCCCHHHHHHHHHHHHHHcC-CCeE
Confidence 124679999987 488888888888899999999999 9999
Q ss_pred EEEeccCCCchhhhhHh--hhc----cCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHH
Q 045407 273 FVMDLYGGTSSEQKLRL--QRR----FANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDC 346 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~--~R~----~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~ 346 (382)
+++-.++.......+.. ... ...-.+... ... .. ...+..+.|+.++++++
T Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~-~~--~~~~~~~~~~~~~l~~l 193 (235)
T 3sm3_A 137 LYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLAR--------------------DPE-TG--ETEFIAHHFTEKELVFL 193 (235)
T ss_dssp EEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEE--------------------CTT-TC--CEEEEEECBCHHHHHHH
T ss_pred EEEEECCcchhHHHHHHHhhhhccchhhhcceEec--------------------ccc-cC--CcceeeEeCCHHHHHHH
Confidence 99844322211111100 000 011111111 010 00 01345689999999999
Q ss_pred HHHcCCcEEEEEec
Q 045407 347 LEEAGFRSVHFWLR 360 (382)
Q Consensus 347 LeeAGF~~V~v~~r 360 (382)
|++|||+.+.+...
T Consensus 194 l~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 194 LTDCRFEIDYFRVK 207 (235)
T ss_dssp HHTTTEEEEEEEEE
T ss_pred HHHcCCEEEEEEec
Confidence 99999999998643
No 13
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=1.8e-18 Score=154.35 Aligned_cols=207 Identities=17% Similarity=0.134 Sum_probs=118.4
Q ss_pred CCchHHHHHHhhcCChh-hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcc
Q 045407 80 MPSKFLLYQQSVQSPKG-DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNL 158 (382)
Q Consensus 80 ~p~~~~LYd~~vq~p~~-Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~ 158 (382)
.|.....|+..+....+ ...+....+...+....+.+|||+|||||.++..+++.+. .+|+|+|+|+.||+.|+++..
T Consensus 9 ~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~ 87 (243)
T 3bkw_A 9 QPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGP 87 (243)
T ss_dssp ----------------CGGGCTTHHHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSC
T ss_pred CHHHHHHHHHhccCCccHHHHHhHHHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcc
Confidence 34455667766654443 1112222333333333456899999999999999999975 279999999999999998852
Q ss_pred ccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccE
Q 045407 159 NKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDI 238 (382)
Q Consensus 159 ~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDi 238 (382)
. .++.++++|+.+++ +...+||+
T Consensus 88 ~-------~~~~~~~~d~~~~~--------------------------------------------------~~~~~fD~ 110 (243)
T 3bkw_A 88 D-------TGITYERADLDKLH--------------------------------------------------LPQDSFDL 110 (243)
T ss_dssp S-------SSEEEEECCGGGCC--------------------------------------------------CCTTCEEE
T ss_pred c-------CCceEEEcChhhcc--------------------------------------------------CCCCCceE
Confidence 1 36899999986654 12467999
Q ss_pred EEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEE
Q 045407 239 ICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHF 318 (382)
Q Consensus 239 V~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F 318 (382)
|++.+ ++.++. ++..+|+.++++|+ |||+||+...+.... ....+. |... ..... ...+.-
T Consensus 111 v~~~~-~l~~~~---~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~------~~~~~~----~~~~---~~~~~-~~~~~~ 171 (243)
T 3bkw_A 111 AYSSL-ALHYVE---DVARLFRTVHQALS-PGGHFVFSTEHPIYM------APARPG----WAID---AEGRR-TWPIDR 171 (243)
T ss_dssp EEEES-CGGGCS---CHHHHHHHHHHHEE-EEEEEEEEEECHHHH------CCSSCS----CEEC---TTSCE-EEEECC
T ss_pred EEEec-cccccc---hHHHHHHHHHHhcC-cCcEEEEEeCCcccc------cCcCcc----eeec---CCCce-EEeecc
Confidence 99876 666664 56789999999999 999999976431100 000011 1110 00000 000000
Q ss_pred Eeecccceeeeee--eeeEEecCHHHHHHHHHHcCCcEEEEEeccCchh
Q 045407 319 HLQKEQKKLRHAF--SYNWRLWSLPEIKDCLEEAGFRSVHFWLREMPDA 365 (382)
Q Consensus 319 ~~~~~~~~lr~~f--sy~~Rlysl~EI~d~LeeAGF~~V~v~~r~~~~~ 365 (382)
.+..+. .....+ ..+.+.|++.+++.+|++|||+.+.+. ...|..
T Consensus 172 ~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~-~~~~~~ 218 (243)
T 3bkw_A 172 YLVEGP-RKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVE-EFCPTD 218 (243)
T ss_dssp TTCCEE-ECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEE-ECCCCH
T ss_pred cccccc-eeeeeccCceEEEeccHHHHHHHHHHcCCEeeeec-cCCCch
Confidence 000000 000000 123456899999999999999999886 344443
No 14
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.77 E-value=4.2e-18 Score=150.51 Aligned_cols=175 Identities=16% Similarity=0.174 Sum_probs=114.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.++ +|+|+|+|++|++.|+++... ...++.++++|+.+++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~------------- 98 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKS-----RESNVEFIVGDARKLS------------- 98 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCCCEEEECCTTSCC-------------
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHh-----cCCCceEEECchhcCC-------------
Confidence 56899999999999999999987 799999999999999998532 1147999999987754
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ ...+||+|++.. ++. ++...+....+++++++|+ |||+|
T Consensus 99 ----~---------------------------------~~~~~D~v~~~~-~~~-~~~~~~~~~~l~~~~~~L~-~gG~l 138 (227)
T 1ve3_A 99 ----F---------------------------------EDKTFDYVIFID-SIV-HFEPLELNQVFKEVRRVLK-PSGKF 138 (227)
T ss_dssp ----S---------------------------------CTTCEEEEEEES-CGG-GCCHHHHHHHHHHHHHHEE-EEEEE
T ss_pred ----C---------------------------------CCCcEEEEEEcC-chH-hCCHHHHHHHHHHHHHHcC-CCcEE
Confidence 1 245799999874 332 3455788999999999999 99999
Q ss_pred EEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCc
Q 045407 274 VMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFR 353 (382)
Q Consensus 274 VfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~ 353 (382)
++-..+.......+.... ..... .|.. .+.+......+.+.|. ++. ..|..+.+.|+. ++.++|++|||+
T Consensus 139 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~w~~-~~~~~l~~~GF~ 208 (227)
T 1ve3_A 139 IMYFTDLRELLPRLKESL-VVGQK-YWIS-KVIPDQEERTVVIEFK--SEQ----DSFRVRFNVWGK-TGVELLAKLYFT 208 (227)
T ss_dssp EEEEECHHHHGGGCCC-----------CC-EEEEETTTTEEEEEC-----------CCEEEEECCCH-HHHHHHHTTTEE
T ss_pred EEEecChHHHHHHHHhhh-hcccc-eeec-ccccCccccEEEEEec--cch----hhheeehhhhch-HHHHHHHHHhhh
Confidence 985443111111000000 00111 1221 1111111122233332 121 235667789997 789999999999
Q ss_pred EEEEE
Q 045407 354 SVHFW 358 (382)
Q Consensus 354 ~V~v~ 358 (382)
.|.+.
T Consensus 209 ~v~~~ 213 (227)
T 1ve3_A 209 KEAEE 213 (227)
T ss_dssp EEEEE
T ss_pred HHHHH
Confidence 99875
No 15
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=2.5e-17 Score=151.25 Aligned_cols=180 Identities=14% Similarity=0.099 Sum_probs=118.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..|++.+. .+|+|+|+|+.|++.|+++.... + ...++.++++|+.+++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~-~--~~~~v~~~~~d~~~~~------------- 127 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGI-GEYYGVDIAEVSINDARVRARNM-K--RRFKVFFRAQDSYGRH------------- 127 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTC-SEEEEEESCHHHHHHHHHHHHTS-C--CSSEEEEEESCTTTSC-------------
T ss_pred CCeEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHhc-C--CCccEEEEECCccccc-------------
Confidence 46799999999999999999874 48999999999999999985321 1 1147999999997765
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc-CChhHHHHHHHHHHhhccCCCcE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL-HKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL-~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+ .....||+|++.+ ++.|+ ...+++..+|+.+++.|+ |||+
T Consensus 128 ----~--------------------------------~~~~~fD~v~~~~-~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~ 169 (298)
T 1ri5_A 128 ----M--------------------------------DLGKEFDVISSQF-SFHYAFSTSESLDIAQRNIARHLR-PGGY 169 (298)
T ss_dssp ----C--------------------------------CCSSCEEEEEEES-CGGGGGSSHHHHHHHHHHHHHTEE-EEEE
T ss_pred ----c--------------------------------CCCCCcCEEEECc-hhhhhcCCHHHHHHHHHHHHHhcC-CCCE
Confidence 1 0145799999876 44443 567889999999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccc---cceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHH
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDII---ERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEE 349 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~---~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~Lee 349 (382)
||+...+.......+. ...+.+..|. . .++.. ........+|.+.... .....+++++++|+.+|++
T Consensus 170 l~~~~~~~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~~l~~~~------~~~~~~~~~~~~l~~ll~~ 239 (298)
T 1ri5_A 170 FIMTVPSRDVILERYK-QGRMSNDFYK-I--ELEKMEDVPMESVREYRFTLLDSV------NNCIEYFVDFTRMVDGFKR 239 (298)
T ss_dssp EEEEEECHHHHHHHHH-HTCCBCSSEE-E--ECCCCSSCCTTTCCEEEEEETTSC------SSEEEECCCHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHc-cCccCCeeEE-E--EeCccccccccccceEEEEEchhh------cCCcccccCHHHHHHHHHH
Confidence 9998765322222221 1112111111 1 11110 0000001222221110 1123589999999999999
Q ss_pred cCCcEEEEE
Q 045407 350 AGFRSVHFW 358 (382)
Q Consensus 350 AGF~~V~v~ 358 (382)
|||+.+.+.
T Consensus 240 aGf~~v~~~ 248 (298)
T 1ri5_A 240 LGLSLVERK 248 (298)
T ss_dssp TTEEEEEEE
T ss_pred cCCEEEEec
Confidence 999998874
No 16
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.76 E-value=2.6e-18 Score=159.05 Aligned_cols=189 Identities=15% Similarity=0.104 Sum_probs=124.2
Q ss_pred CCchHHHHHHhhcCChh---hHHHHHHHHHHhh--CCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHH
Q 045407 80 MPSKFLLYQQSVQSPKG---DISYLQKFFLIYV--GGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCM 154 (382)
Q Consensus 80 ~p~~~~LYd~~vq~p~~---Di~yl~~~f~~y~--ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~ 154 (382)
-+.++..|-+.-.++.. -+.|+.+.+.... +.....+|||+|||||.++..+++.|.. .|+|+|+|+.||+.|+
T Consensus 17 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~-~v~g~D~s~~~l~~a~ 95 (263)
T 2a14_A 17 PRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQ-DITLSDFTDRNREELE 95 (263)
T ss_dssp HHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEE-EEEEEESCHHHHHHHH
T ss_pred HHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhc-ceeeccccHHHHHHHH
Confidence 34566666655444432 2567777776544 2223457999999999998888888863 7999999999999999
Q ss_pred HhccccccCC-------------C------------CcceE-EEeccCCCchhhhhcccchhhhhhccccccccCccccc
Q 045407 155 ENNLNKVGAD-------------G------------YSRIS-LFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETS 208 (382)
Q Consensus 155 e~~~~kl~~d-------------~------------~~RI~-l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (382)
++.....++- + ..+|. ++++||.++.. +
T Consensus 96 ~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~----------------~---------- 149 (263)
T 2a14_A 96 KWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNP----------------L---------- 149 (263)
T ss_dssp HHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSST----------------T----------
T ss_pred HHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCC----------------C----------
Confidence 8642210000 0 01233 77777766420 0
Q ss_pred hhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhH
Q 045407 209 TIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLR 288 (382)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~ 288 (382)
.....++||+|+|.+.......+.+++..++++++++|+ |||+||+-...+
T Consensus 150 --------------------~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK-PGG~li~~~~~~-------- 200 (263)
T 2a14_A 150 --------------------APAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK-PGGHLVTTVTLR-------- 200 (263)
T ss_dssp --------------------TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEESS--------
T ss_pred --------------------CccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEeec--------
Confidence 001146799999998554444677899999999999999 999999953210
Q ss_pred hhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 289 LQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 289 ~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
.+ .|.+ +. . . +....|+.++|+++|++|||+.+.+.
T Consensus 201 -----~~-~~~~----------------------g~-~---~--~~~~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 201 -----LP-SYMV----------------------GK-R---E--FSCVALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp -----CC-EEEE----------------------TT-E---E--EECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred -----Cc-ccee----------------------CC-e---E--eeccccCHHHHHHHHHHCCCEEEEEe
Confidence 11 1111 11 0 0 11135799999999999999998875
No 17
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.74 E-value=1.2e-17 Score=159.98 Aligned_cols=185 Identities=11% Similarity=0.074 Sum_probs=114.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCC---CCcceEEEeccCCCchhhhhcccchh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGAD---GYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d---~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..+|||+|||||.++..|++.+. .+|+|||+|++||+.|+++.... +.. .+-.+.+.++|+....+..
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~-~~v~GiD~S~~~l~~A~~~~~~~-~~~~~~~~~~~~f~~~d~~~d~~~~------- 119 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEI-ALLVATDPDADAIARGNERYNKL-NSGIKTKYYKFDYIQETIRSDTFVS------- 119 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHH-CC----CCCEEEEEECCTTSSSHHH-------
T ss_pred CCeEEEEecCCcHhHHHHHhcCC-CeEEEEECCHHHHHHHHHHHHhc-cccccccccccchhhhhcccchhhh-------
Confidence 46799999999998888988764 58999999999999999986331 100 0013678888885432100
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
+ + + ..+..++||+|+|.+ ++.|+.+.+++..++++++++|+ ||
T Consensus 120 ----~--l----------------~-------------~~~~~~~FD~V~~~~-~lhy~~~~~~~~~~l~~~~r~Lk-pG 162 (302)
T 2vdw_A 120 ----S--V----------------R-------------EVFYFGKFNIIDWQF-AIHYSFHPRHYATVMNNLSELTA-SG 162 (302)
T ss_dssp ----H--H----------------H-------------TTCCSSCEEEEEEES-CGGGTCSTTTHHHHHHHHHHHEE-EE
T ss_pred ----h--h----------------h-------------ccccCCCeeEEEECc-hHHHhCCHHHHHHHHHHHHHHcC-CC
Confidence 0 0 0 002246799999987 67776555577899999999999 99
Q ss_pred cEEEEeccCCCchhhhhHhhhccCCeEE--------EEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHH
Q 045407 271 GIFVMDLYGGTSSEQKLRLQRRFANFTY--------VWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPE 342 (382)
Q Consensus 271 GiFVfDl~gg~s~e~kl~~~R~~~~~ty--------vWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~E 342 (382)
|+||+...+.+.....+ +. ..+.. .|.... .+....+ + .+.+.+. ...+.++++++++
T Consensus 163 G~~i~~~~~~~~~~~~~---~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~---~-~~~~~~~-----~~~~~e~~v~~~e 228 (302)
T 2vdw_A 163 GKVLITTMDGDKLSKLT---DK-KTFIIHKNLPSSENYMSVE-KIADDRI---V-VYNPSTM-----STPMTEYIIKKND 228 (302)
T ss_dssp EEEEEEEECHHHHTTCC---SC-EEEECCSSSCTTTSEEEEC-EEETTEE---E-EBCTTTB-----SSCEEEECCCHHH
T ss_pred CEEEEEeCCHHHHHHHH---hc-CCcccccccccccceeeec-ccccccc---c-eeecccc-----CCCceeeeeEHHH
Confidence 99999876533221111 00 01110 011100 0000000 1 1112221 1123458999999
Q ss_pred HHHHHHHcCCcEEEEE
Q 045407 343 IKDCLEEAGFRSVHFW 358 (382)
Q Consensus 343 I~d~LeeAGF~~V~v~ 358 (382)
|+.+++++||+.+...
T Consensus 229 l~~l~~~~Gl~lv~~~ 244 (302)
T 2vdw_A 229 IVRVFNEYGFVLVDNV 244 (302)
T ss_dssp HHHHHHHTTEEEEEEE
T ss_pred HHHHHHHCCCEEEEec
Confidence 9999999999998873
No 18
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.74 E-value=4.7e-18 Score=148.30 Aligned_cols=156 Identities=19% Similarity=0.213 Sum_probs=111.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..|++. +..+|+|+|+|+.|++.|+++... .+ ...++.++++|+.+++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~-~~--~~~~~~~~~~d~~~~~------------- 106 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIAD-AN--LNDRIQIVQGDVHNIP------------- 106 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHH-TT--CTTTEEEEECBTTBCS-------------
T ss_pred CCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHh-cc--ccCceEEEEcCHHHCC-------------
Confidence 458999999999999999998 446899999999999999998533 11 1247999999997755
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+....||+|++.+ ++.|+ .+...+++.+++.|+ |||++
T Consensus 107 -------------------------------------~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~L~-pgG~l 144 (219)
T 3dlc_A 107 -------------------------------------IEDNYADLIVSRG-SVFFW---EDVATAFREIYRILK-SGGKT 144 (219)
T ss_dssp -------------------------------------SCTTCEEEEEEES-CGGGC---SCHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------CCcccccEEEECc-hHhhc---cCHHHHHHHHHHhCC-CCCEE
Confidence 1246799999876 55665 456789999999999 99999
Q ss_pred EE-eccCCCchhhhhHh--hhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHc
Q 045407 274 VM-DLYGGTSSEQKLRL--QRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEA 350 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~--~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeA 350 (382)
++ +.++.......+.. ....+ .|.. .+..+.+.|+..+++++|++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------------------~~~~~~~~~~~~~~~~~l~~a 193 (219)
T 3dlc_A 145 YIGGGFGNKELRDSISAEMIRKNP----DWKE---------------------------FNRKNISQENVERFQNVLDEI 193 (219)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHCT----THHH---------------------------HHHHHSSHHHHHHHHHHHHHH
T ss_pred EEEeccCcHHHHHHHHHHHHHhHH----HHHh---------------------------hhhhccccCCHHHHHHHHHHc
Confidence 98 44443222111111 00001 1211 011123577999999999999
Q ss_pred CCcEEEEEe
Q 045407 351 GFRSVHFWL 359 (382)
Q Consensus 351 GF~~V~v~~ 359 (382)
||+.+.++.
T Consensus 194 Gf~~v~~~~ 202 (219)
T 3dlc_A 194 GISSYEIIL 202 (219)
T ss_dssp TCSSEEEEE
T ss_pred CCCeEEEEe
Confidence 999999874
No 19
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=9.7e-18 Score=147.03 Aligned_cols=157 Identities=20% Similarity=0.245 Sum_probs=110.0
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+.+|||+|||||.++..+++.|. +|+|+|+|+.||+.|+++. ++.++++|+.++...
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~----------~~~~~~~~~~~~~~~---------- 109 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAAG----------AGEVHLASYAQLAEA---------- 109 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHTC----------SSCEEECCHHHHHTT----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHhc----------ccccchhhHHhhccc----------
Confidence 357899999999999999999975 7999999999999999872 466888887655310
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
.. ....+||+|++.+... ..+...+++.+++.|+ |||+
T Consensus 110 ----~~--------------------------------~~~~~fD~v~~~~~l~-----~~~~~~~l~~~~~~L~-pgG~ 147 (227)
T 3e8s_A 110 ----KV--------------------------------PVGKDYDLICANFALL-----HQDIIELLSAMRTLLV-PGGA 147 (227)
T ss_dssp ----CS--------------------------------CCCCCEEEEEEESCCC-----SSCCHHHHHHHHHTEE-EEEE
T ss_pred ----cc--------------------------------ccCCCccEEEECchhh-----hhhHHHHHHHHHHHhC-CCeE
Confidence 00 0134599999875332 3577899999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|++-..+...... ..+.-.|....+... .+. ...+.++.|++.+++.+|++|||
T Consensus 148 l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-------------~~~-----~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 148 LVIQTLHPWSVAD--------GDYQDGWREESFAGF-------------AGD-----WQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp EEEEECCTTTTCT--------TCCSCEEEEECCTTS-------------SSC-----CCCEEEEECCHHHHHHHHHHTTE
T ss_pred EEEEecCccccCc--------cccccccchhhhhcc-------------ccC-----cccceEEEecHHHHHHHHHHcCC
Confidence 9996654322210 112223443222110 000 01345688999999999999999
Q ss_pred cEEEEEe
Q 045407 353 RSVHFWL 359 (382)
Q Consensus 353 ~~V~v~~ 359 (382)
+.+++..
T Consensus 202 ~~~~~~~ 208 (227)
T 3e8s_A 202 RLVSLQE 208 (227)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9999864
No 20
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.74 E-value=5.1e-17 Score=142.36 Aligned_cols=102 Identities=11% Similarity=0.063 Sum_probs=84.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.|. +|+|+|+|+.||+.|+++. ..++.++++|+.++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~--------~~~~~~~~~d~~~~~------------- 103 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRHG--------LDNVEFRQQDLFDWT------------- 103 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGGC--------CTTEEEEECCTTSCC-------------
T ss_pred CCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhcC--------CCCeEEEecccccCC-------------
Confidence 35899999999999999999974 7999999999999999832 247999999986653
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
...+||+|++.+ ++.|+.+ +++..+++.+++.|+ |||+|
T Consensus 104 --------------------------------------~~~~~D~v~~~~-~l~~~~~-~~~~~~l~~~~~~L~-pgG~l 142 (218)
T 3ou2_A 104 --------------------------------------PDRQWDAVFFAH-WLAHVPD-DRFEAFWESVRSAVA-PGGVV 142 (218)
T ss_dssp --------------------------------------CSSCEEEEEEES-CGGGSCH-HHHHHHHHHHHHHEE-EEEEE
T ss_pred --------------------------------------CCCceeEEEEec-hhhcCCH-HHHHHHHHHHHHHcC-CCeEE
Confidence 146799999975 6677654 568999999999999 99999
Q ss_pred EEeccC
Q 045407 274 VMDLYG 279 (382)
Q Consensus 274 VfDl~g 279 (382)
++-..+
T Consensus 143 ~~~~~~ 148 (218)
T 3ou2_A 143 EFVDVT 148 (218)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 995443
No 21
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.73 E-value=1e-17 Score=148.53 Aligned_cols=167 Identities=11% Similarity=0.087 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCC
Q 045407 98 ISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVL 177 (382)
Q Consensus 98 i~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~ 177 (382)
..++.+.+..+. .+.+|||+|||||.++..+++.++ +|+|||+|+.||+.|+++... ++.++++|+.
T Consensus 30 ~~~~~~~l~~~~---~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~--------~v~~~~~d~~ 96 (250)
T 2p7i_A 30 HPFMVRAFTPFF---RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD--------GITYIHSRFE 96 (250)
T ss_dssp HHHHHHHHGGGC---CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS--------CEEEEESCGG
T ss_pred HHHHHHHHHhhc---CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC--------CeEEEEccHH
Confidence 356666665433 245799999999999999999986 699999999999999998521 6899999986
Q ss_pred CchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHH
Q 045407 178 QPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVL 257 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~ 257 (382)
++. ...+||+|++.+ ++.|+.+ ...
T Consensus 97 ~~~---------------------------------------------------~~~~fD~v~~~~-~l~~~~~---~~~ 121 (250)
T 2p7i_A 97 DAQ---------------------------------------------------LPRRYDNIVLTH-VLEHIDD---PVA 121 (250)
T ss_dssp GCC---------------------------------------------------CSSCEEEEEEES-CGGGCSS---HHH
T ss_pred HcC---------------------------------------------------cCCcccEEEEhh-HHHhhcC---HHH
Confidence 543 146799999886 6777654 468
Q ss_pred HHHHHH-hhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEE
Q 045407 258 YFKHVL-HALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWR 336 (382)
Q Consensus 258 yFr~V~-~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~R 336 (382)
+|+.++ ++|+ |||++++...+........... .+ .|.. .... .... . ...+.+
T Consensus 122 ~l~~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~---~~---~~~~-~~~~-------------~~~~-~----~~~~~~ 175 (250)
T 2p7i_A 122 LLKRINDDWLA-EGGRLFLVCPNANAVSRQIAVK---MG---IISH-NSAV-------------TEAE-F----AHGHRC 175 (250)
T ss_dssp HHHHHHHTTEE-EEEEEEEEEECTTCHHHHHHHH---TT---SSSS-TTCC-------------CHHH-H----HTTCCC
T ss_pred HHHHHHHHhcC-CCCEEEEEcCChHHHHHHHHHH---cC---cccc-chhc-------------cccc-c----cccccc
Confidence 999999 9999 9999999765443332211100 01 0100 0000 0000 0 011236
Q ss_pred ecCHHHHHHHHHHcCCcEEEEE
Q 045407 337 LWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 337 lysl~EI~d~LeeAGF~~V~v~ 358 (382)
.|+..+++++|++|||+.+++.
T Consensus 176 ~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 176 TYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEe
Confidence 8999999999999999999874
No 22
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.73 E-value=2.5e-17 Score=145.30 Aligned_cols=150 Identities=19% Similarity=0.120 Sum_probs=112.4
Q ss_pred HHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCC
Q 045407 98 ISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVL 177 (382)
Q Consensus 98 i~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~ 177 (382)
..++..++.. .. .+.+|||+|||+|.++..+++.|. +|+|+|+|+.||+.|+++. ++.++++|+.
T Consensus 31 ~~~~~~~~~~-~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~ 95 (211)
T 3e23_A 31 SATLTKFLGE-LP--AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL----------GRPVRTMLFH 95 (211)
T ss_dssp CHHHHHHHTT-SC--TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----------TSCCEECCGG
T ss_pred hHHHHHHHHh-cC--CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc----------CCceEEeeec
Confidence 3445554443 21 245799999999999999999974 7999999999999999984 3567788875
Q ss_pred CchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHH
Q 045407 178 QPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVL 257 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~ 257 (382)
+++ ....||+|+|.+ ++.|+. .+++..
T Consensus 96 ~~~---------------------------------------------------~~~~fD~v~~~~-~l~~~~-~~~~~~ 122 (211)
T 3e23_A 96 QLD---------------------------------------------------AIDAYDAVWAHA-CLLHVP-RDELAD 122 (211)
T ss_dssp GCC---------------------------------------------------CCSCEEEEEECS-CGGGSC-HHHHHH
T ss_pred cCC---------------------------------------------------CCCcEEEEEecC-chhhcC-HHHHHH
Confidence 544 146799999875 666655 578899
Q ss_pred HHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEe
Q 045407 258 YFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRL 337 (382)
Q Consensus 258 yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rl 337 (382)
+|+.+++.|+ |||+|++-+..+... . . . .+...++.
T Consensus 123 ~l~~~~~~Lk-pgG~l~~~~~~~~~~---------------~-~--------------------~-------~~~~~~~~ 158 (211)
T 3e23_A 123 VLKLIWRALK-PGGLFYASYKSGEGE---------------G-R--------------------D-------KLARYYNY 158 (211)
T ss_dssp HHHHHHHHEE-EEEEEEEEEECCSSC---------------E-E--------------------C-------TTSCEECC
T ss_pred HHHHHHHhcC-CCcEEEEEEcCCCcc---------------c-c--------------------c-------ccchhccC
Confidence 9999999999 999999965432110 0 0 0 01122468
Q ss_pred cCHHHHHHHHHHcC-CcEEEEEe
Q 045407 338 WSLPEIKDCLEEAG-FRSVHFWL 359 (382)
Q Consensus 338 ysl~EI~d~LeeAG-F~~V~v~~ 359 (382)
|+..+++.+|++|| |+.+.+..
T Consensus 159 ~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 159 PSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp CCHHHHHHHHHHHCCCSEEEEEE
T ss_pred CCHHHHHHHHHhCCCcEEEEEEe
Confidence 99999999999999 99999864
No 23
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.72 E-value=8e-17 Score=144.92 Aligned_cols=160 Identities=19% Similarity=0.136 Sum_probs=117.3
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
+..++..++.. .....+.+|||+|||||.++..|++.+. .+|+|+|+|+.||+.|+++... ..++.++++|+
T Consensus 78 ~~~~~~~~l~~-l~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~ 149 (254)
T 1xtp_A 78 DIEGSRNFIAS-LPGHGTSRALDCGAGIGRITKNLLTKLY-ATTDLLEPVKHMLEEAKRELAG------MPVGKFILASM 149 (254)
T ss_dssp HHHHHHHHHHT-STTCCCSEEEEETCTTTHHHHHTHHHHC-SEEEEEESCHHHHHHHHHHTTT------SSEEEEEESCG
T ss_pred HHHHHHHHHHh-hcccCCCEEEEECCCcCHHHHHHHHhhc-CEEEEEeCCHHHHHHHHHHhcc------CCceEEEEccH
Confidence 33555566554 3334467899999999999999999984 4799999999999999998532 14799999998
Q ss_pred CCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHH
Q 045407 177 LQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLV 256 (382)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~ 256 (382)
.+++ +....||+|++.. ++.|+.+ +++.
T Consensus 150 ~~~~--------------------------------------------------~~~~~fD~v~~~~-~l~~~~~-~~~~ 177 (254)
T 1xtp_A 150 ETAT--------------------------------------------------LPPNTYDLIVIQW-TAIYLTD-ADFV 177 (254)
T ss_dssp GGCC--------------------------------------------------CCSSCEEEEEEES-CGGGSCH-HHHH
T ss_pred HHCC--------------------------------------------------CCCCCeEEEEEcc-hhhhCCH-HHHH
Confidence 6654 1245799999876 6677654 6889
Q ss_pred HHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEE
Q 045407 257 LYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWR 336 (382)
Q Consensus 257 ~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~R 336 (382)
.+|+.++++|+ |||+||+-.+.. ....+++. ... +..
T Consensus 178 ~~l~~~~~~Lk-pgG~l~i~~~~~-------------~~~~~~~~--------------------~~~---------~~~ 214 (254)
T 1xtp_A 178 KFFKHCQQALT-PNGYIFFKENCS-------------TGDRFLVD--------------------KED---------SSL 214 (254)
T ss_dssp HHHHHHHHHEE-EEEEEEEEEEBC---------------CCEEEE--------------------TTT---------TEE
T ss_pred HHHHHHHHhcC-CCeEEEEEecCC-------------Ccccceec--------------------ccC---------Ccc
Confidence 99999999999 999999943210 00001110 011 113
Q ss_pred ecCHHHHHHHHHHcCCcEEEEEe
Q 045407 337 LWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 337 lysl~EI~d~LeeAGF~~V~v~~ 359 (382)
.++..+++.+|++|||+.+++..
T Consensus 215 ~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 215 TRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp EBCHHHHHHHHHHHTCCEEEEEE
T ss_pred cCCHHHHHHHHHHCCCEEEEeee
Confidence 57999999999999999998854
No 24
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.72 E-value=4e-17 Score=153.60 Aligned_cols=181 Identities=17% Similarity=0.199 Sum_probs=122.7
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHH-HhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWL-RSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~ela-r~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
++...+.... ..+.+|||+|||||.++..++ +..+..+|+|+|+|+.|++.|+++.... + ...+|.++++|+.+
T Consensus 107 ~~~~~l~~~l--~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~--~~~~v~~~~~d~~~ 181 (305)
T 3ocj_A 107 HFRRALQRHL--RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH-A--LAGQITLHRQDAWK 181 (305)
T ss_dssp HHHHHHHHHC--CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-T--TGGGEEEEECCGGG
T ss_pred HHHHHHHhhC--CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-C--CCCceEEEECchhc
Confidence 3444444433 235679999999999999996 5556679999999999999999986331 1 12469999999977
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHH
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLY 258 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~y 258 (382)
++ + ...||+|++.. ++.|+.+......+
T Consensus 182 ~~--------------------------------------------------~-~~~fD~v~~~~-~~~~~~~~~~~~~~ 209 (305)
T 3ocj_A 182 LD--------------------------------------------------T-REGYDLLTSNG-LNIYEPDDARVTEL 209 (305)
T ss_dssp CC--------------------------------------------------C-CSCEEEEECCS-SGGGCCCHHHHHHH
T ss_pred CC--------------------------------------------------c-cCCeEEEEECC-hhhhcCCHHHHHHH
Confidence 65 2 26799999854 78888898888899
Q ss_pred HHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeE-Ee
Q 045407 259 FKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNW-RL 337 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~-Rl 337 (382)
|+.++++|+ |||+||+..+...+.. ...+.|.-..+++...... .+ .+......++ ++
T Consensus 210 l~~~~~~Lk-pgG~l~i~~~~~~~~~----------~~~~~w~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~ 268 (305)
T 3ocj_A 210 YRRFWQALK-PGGALVTSFLTPPPAL----------SPDSPWDMQAIDPHDLQLQ---QL-------VFTRLIQPRWNAL 268 (305)
T ss_dssp HHHHHHHEE-EEEEEEEECCCCCTTT----------CTTCCCCGGGSCHHHHHHH---HH-------HHHHTTCCSCCCC
T ss_pred HHHHHHhcC-CCeEEEEEecCCCCcc----------cccccceeeccccchhhhh---hh-------HHHHHHhhhhhcc
Confidence 999999999 9999999665432221 1112233112221000000 00 0000011112 57
Q ss_pred cCHHHHHHHHHHcCCcEEEEE
Q 045407 338 WSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 338 ysl~EI~d~LeeAGF~~V~v~ 358 (382)
|+..+++.+|++|||+.+++.
T Consensus 269 ~~~~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 269 RTHAQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp CCHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCEEEEEE
Confidence 999999999999999999986
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.71 E-value=8.4e-17 Score=143.82 Aligned_cols=145 Identities=16% Similarity=0.164 Sum_probs=108.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.|. +|+|+|+|+.|++.|+++. ...++.++++|+.+++
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~-------~~~~~~~~~~d~~~~~------------- 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERG-------EGPDLSFIKGDLSSLP------------- 111 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTT-------CBTTEEEEECBTTBCS-------------
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhc-------ccCCceEEEcchhcCC-------------
Confidence 45799999999999999999975 7999999999999999874 1247999999987665
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+...+||+|++.+ ++.|+. +...+++.+++.|+ |||+|
T Consensus 112 -------------------------------------~~~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~L~-pgG~l 149 (242)
T 3l8d_A 112 -------------------------------------FENEQFEAIMAIN-SLEWTE---EPLRALNEIKRVLK-SDGYA 149 (242)
T ss_dssp -------------------------------------SCTTCEEEEEEES-CTTSSS---CHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------CCCCCccEEEEcC-hHhhcc---CHHHHHHHHHHHhC-CCeEE
Confidence 1246799999875 566654 55688999999999 99999
Q ss_pred EEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCc
Q 045407 274 VMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFR 353 (382)
Q Consensus 274 VfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~ 353 (382)
++-..+........ .|.. .+ + ...+.+.+++.+++.+|++|||+
T Consensus 150 ~i~~~~~~~~~~~~-----------~~~~-~~-----------------~-------~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 150 CIAILGPTAKPREN-----------SYPR-LY-----------------G-------KDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp EEEEECTTCGGGGG-----------GGGG-GG-----------------T-------CCCSSCCCCHHHHHHHHHHTTEE
T ss_pred EEEEcCCcchhhhh-----------hhhh-hc-----------------c-------ccccccCCCHHHHHHHHHHcCCE
Confidence 99665432221100 0000 00 0 00123678999999999999999
Q ss_pred EEEEE
Q 045407 354 SVHFW 358 (382)
Q Consensus 354 ~V~v~ 358 (382)
.+.+.
T Consensus 194 ~~~~~ 198 (242)
T 3l8d_A 194 VVDGI 198 (242)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 99863
No 26
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.71 E-value=6e-17 Score=145.48 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=120.9
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
.+..++... ...+.+|||+|||||.++..+++.+. +|+|+|+|+.||+.|+++.... ....+|.++++|+.++
T Consensus 55 ~l~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~---~~~~~v~~~~~d~~~~ 127 (235)
T 3lcc_A 55 LIVHLVDTS--SLPLGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSS---PKAEYFSFVKEDVFTW 127 (235)
T ss_dssp HHHHHHHTT--CSCCEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTS---GGGGGEEEECCCTTTC
T ss_pred HHHHHHHhc--CCCCCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhcc---CCCcceEEEECchhcC
Confidence 444544431 22346899999999999999998774 7999999999999999986320 0124799999999876
Q ss_pred hhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHH
Q 045407 180 LEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYF 259 (382)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yF 259 (382)
. . ...||+|++.+ ++.++. +++...++
T Consensus 128 ~-----------------~----------------------------------~~~fD~v~~~~-~l~~~~-~~~~~~~l 154 (235)
T 3lcc_A 128 R-----------------P----------------------------------TELFDLIFDYV-FFCAIE-PEMRPAWA 154 (235)
T ss_dssp C-----------------C----------------------------------SSCEEEEEEES-STTTSC-GGGHHHHH
T ss_pred C-----------------C----------------------------------CCCeeEEEECh-hhhcCC-HHHHHHHH
Confidence 5 1 34799999864 666664 56889999
Q ss_pred HHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecC
Q 045407 260 KHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWS 339 (382)
Q Consensus 260 r~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlys 339 (382)
+.+++.|+ |||+||+-.++.... ..+. . ..++
T Consensus 155 ~~~~~~Lk-pgG~l~~~~~~~~~~-------------------------------------~~~~-~---------~~~~ 186 (235)
T 3lcc_A 155 KSMYELLK-PDGELITLMYPITDH-------------------------------------VGGP-P---------YKVD 186 (235)
T ss_dssp HHHHHHEE-EEEEEEEEECCCSCC-------------------------------------CSCS-S---------CCCC
T ss_pred HHHHHHCC-CCcEEEEEEeccccc-------------------------------------CCCC-C---------ccCC
Confidence 99999999 999999854421000 0011 0 1378
Q ss_pred HHHHHHHHHHcCCcEEEEEeccCchhhhhccccCcCcccccc
Q 045407 340 LPEIKDCLEEAGFRSVHFWLREMPDAREMRNTEGLGGFSRCK 381 (382)
Q Consensus 340 l~EI~d~LeeAGF~~V~v~~r~~~~~~~~~~~~~~~~~~~~~ 381 (382)
..+++.+|+++||+.+.+.. .+... ....|...|.|+|
T Consensus 187 ~~~~~~~l~~~Gf~~~~~~~--~~~~~--~~~~g~e~~~~~~ 224 (235)
T 3lcc_A 187 VSTFEEVLVPIGFKAVSVEE--NPHAI--PTRKGKEKLGRWK 224 (235)
T ss_dssp HHHHHHHHGGGTEEEEEEEE--CTTCC--TTTTTSCEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEEe--cCCcc--ccccCHHHHhhhh
Confidence 99999999999999988753 33332 2334555666665
No 27
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.70 E-value=3.2e-17 Score=146.55 Aligned_cols=121 Identities=12% Similarity=0.115 Sum_probs=89.5
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccc-----cC---CCCcceEE
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKV-----GA---DGYSRISL 171 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl-----~~---d~~~RI~l 171 (382)
++.+++... .-..+.+|||+|||||.++..|+++|. +|+|||+|+.||+.|++++...- +. ....+|.+
T Consensus 10 ~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ 86 (203)
T 1pjz_A 10 DLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEI 86 (203)
T ss_dssp HHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEE
T ss_pred HHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEE
Confidence 455555442 222346799999999999999999985 79999999999999999853100 00 01247999
Q ss_pred EeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCC
Q 045407 172 FHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHK 251 (382)
Q Consensus 172 ~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~ 251 (382)
+++|+.+++... ..+||+|++.+ ++++++
T Consensus 87 ~~~d~~~l~~~~-------------------------------------------------~~~fD~v~~~~-~l~~l~- 115 (203)
T 1pjz_A 87 WCGDFFALTARD-------------------------------------------------IGHCAAFYDRA-AMIALP- 115 (203)
T ss_dssp EEECCSSSTHHH-------------------------------------------------HHSEEEEEEES-CGGGSC-
T ss_pred EECccccCCccc-------------------------------------------------CCCEEEEEECc-chhhCC-
Confidence 999998876200 15699999864 777776
Q ss_pred hhHHHHHHHHHHhhccCCCcEEEE
Q 045407 252 RADLVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 252 r~dL~~yFr~V~~~L~~pGGiFVf 275 (382)
.++...++++++++|+ |||++++
T Consensus 116 ~~~~~~~l~~~~r~Lk-pgG~~~l 138 (203)
T 1pjz_A 116 ADMRERYVQHLEALMP-QACSGLL 138 (203)
T ss_dssp HHHHHHHHHHHHHHSC-SEEEEEE
T ss_pred HHHHHHHHHHHHHHcC-CCcEEEE
Confidence 4677889999999999 9998443
No 28
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.70 E-value=2.4e-16 Score=139.95 Aligned_cols=123 Identities=13% Similarity=0.094 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc-ccCCCCcceEEEeccCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK-VGADGYSRISLFHGNVL 177 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k-l~~d~~~RI~l~~gDV~ 177 (382)
.++.+.+... .+.+|||+|||||.++..|++.++..+|+|||+|+.||+.|+++.... +......++.++++|+.
T Consensus 19 ~~l~~~l~~~----~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 19 NGVVAALKQS----NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHT----TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHhc----CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4555555432 245799999999999999999987678999999999999999985320 00000127999999985
Q ss_pred CchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHH
Q 045407 178 QPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVL 257 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~ 257 (382)
.++ . ...+||+|+|.+ ++.|+ ...++..
T Consensus 95 ~~~-----------------~---------------------------------~~~~fD~v~~~~-~l~~~-~~~~~~~ 122 (217)
T 3jwh_A 95 YQD-----------------K---------------------------------RFHGYDAATVIE-VIEHL-DLSRLGA 122 (217)
T ss_dssp SCC-----------------G---------------------------------GGCSCSEEEEES-CGGGC-CHHHHHH
T ss_pred ccc-----------------c---------------------------------cCCCcCEEeeHH-HHHcC-CHHHHHH
Confidence 544 1 136799999775 77777 5568899
Q ss_pred HHHHHHhhccCCCcEEEEecc
Q 045407 258 YFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 258 yFr~V~~~L~~pGGiFVfDl~ 278 (382)
+++.+++.|+ |||+||+-.+
T Consensus 123 ~l~~~~~~Lk-pgG~li~~~~ 142 (217)
T 3jwh_A 123 FERVLFEFAQ-PKIVIVTTPN 142 (217)
T ss_dssp HHHHHHTTTC-CSEEEEEEEB
T ss_pred HHHHHHHHcC-CCEEEEEccC
Confidence 9999999999 9998888543
No 29
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.70 E-value=1.1e-16 Score=144.30 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=110.8
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|||+|||||.++..+++.. ..+|+|||+|+.||+.|+++... . .++.++++|+.+++
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-----~-~~~~~~~~d~~~~~----------- 115 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG-----N-NKIIFEANDILTKE----------- 115 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS-----C-TTEEEEECCTTTCC-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc-----C-CCeEEEECccccCC-----------
Confidence 335689999999999999999983 25899999999999999998532 1 58999999998765
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
+...+||+|++.. ++.++. ..+...+|+.++++|+ |||
T Consensus 116 ---------------------------------------~~~~~fD~v~~~~-~l~~~~-~~~~~~~l~~~~~~L~-pgG 153 (266)
T 3ujc_A 116 ---------------------------------------FPENNFDLIYSRD-AILALS-LENKNKLFQKCYKWLK-PTG 153 (266)
T ss_dssp ---------------------------------------CCTTCEEEEEEES-CGGGSC-HHHHHHHHHHHHHHEE-EEE
T ss_pred ---------------------------------------CCCCcEEEEeHHH-HHHhcC-hHHHHHHHHHHHHHcC-CCC
Confidence 2246799999964 666653 4788999999999999 999
Q ss_pred EEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcC
Q 045407 272 IFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAG 351 (382)
Q Consensus 272 iFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAG 351 (382)
++++-........ .+.-.|.. .+ ...+.+.++.++++.+|+++|
T Consensus 154 ~l~~~~~~~~~~~----------~~~~~~~~-----------------------~~---~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 154 TLLITDYCATEKE----------NWDDEFKE-----------------------YV---KQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp EEEEEEEEESCGG----------GCCHHHHH-----------------------HH---HHHTCCCCCHHHHHHHHHHTT
T ss_pred EEEEEEeccCCcc----------cchHHHHH-----------------------HH---hcCCCCCCCHHHHHHHHHHcC
Confidence 9999433111100 00000000 00 001235789999999999999
Q ss_pred CcEEEEE
Q 045407 352 FRSVHFW 358 (382)
Q Consensus 352 F~~V~v~ 358 (382)
|+.+++.
T Consensus 198 f~~~~~~ 204 (266)
T 3ujc_A 198 FKNVVSK 204 (266)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 9999875
No 30
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.70 E-value=8e-17 Score=146.75 Aligned_cols=166 Identities=15% Similarity=0.162 Sum_probs=115.6
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEe
Q 045407 94 PKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFH 173 (382)
Q Consensus 94 p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~ 173 (382)
+..++..+.+.+. ...+.+|||+|||||.++..+++.+. +|+|+|+|++||+.|+++... .+..++.+++
T Consensus 22 ~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~----~~~~~v~~~~ 91 (260)
T 1vl5_A 22 KGSDLAKLMQIAA----LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEG----NGHQQVEYVQ 91 (260)
T ss_dssp -CCCHHHHHHHHT----CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHH----TTCCSEEEEE
T ss_pred CHHHHHHHHHHhC----CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHh----cCCCceEEEE
Confidence 4455566666543 23356899999999999999999985 799999999999999987532 1224699999
Q ss_pred ccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh
Q 045407 174 GNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA 253 (382)
Q Consensus 174 gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~ 253 (382)
+|+.+++ +....||+|++.+ ++.|+.
T Consensus 92 ~d~~~l~--------------------------------------------------~~~~~fD~V~~~~-~l~~~~--- 117 (260)
T 1vl5_A 92 GDAEQMP--------------------------------------------------FTDERFHIVTCRI-AAHHFP--- 117 (260)
T ss_dssp CCC-CCC--------------------------------------------------SCTTCEEEEEEES-CGGGCS---
T ss_pred ecHHhCC--------------------------------------------------CCCCCEEEEEEhh-hhHhcC---
Confidence 9987765 2246799999875 666665
Q ss_pred HHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeee
Q 045407 254 DLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFS 332 (382)
Q Consensus 254 dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fs 332 (382)
+....|++++++|+ |||+|++ +............... ++. ....
T Consensus 118 d~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~--------~~~-----------------~~~~--------- 162 (260)
T 1vl5_A 118 NPASFVSEAYRVLK-KGGQLLLVDNSAPENDAFDVFYNY--------VEK-----------------ERDY--------- 162 (260)
T ss_dssp CHHHHHHHHHHHEE-EEEEEEEEEEEBCSSHHHHHHHHH--------HHH-----------------HHCT---------
T ss_pred CHHHHHHHHHHHcC-CCCEEEEEEcCCCCCHHHHHHHHH--------HHH-----------------hcCc---------
Confidence 45689999999999 9999998 5543222111000000 000 0001
Q ss_pred eeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 333 YNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 333 y~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
.+.+.|+..++.++|++|||+.+.+.
T Consensus 163 ~~~~~~~~~~~~~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 163 SHHRAWKKSDWLKMLEEAGFELEELH 188 (260)
T ss_dssp TCCCCCBHHHHHHHHHHHTCEEEEEE
T ss_pred cccCCCCHHHHHHHHHHCCCeEEEEE
Confidence 11367899999999999999988764
No 31
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.70 E-value=1e-16 Score=144.75 Aligned_cols=141 Identities=15% Similarity=0.154 Sum_probs=106.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.|. +|+|||+|++|++.|+++ +.++++|+.++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~------------ 95 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLK------------ 95 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHTT------------SEEECSCHHHHHH------------
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHhh------------cceeeccHHHHhh------------
Confidence 46799999999999999999986 599999999999998875 5678888765420
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
.+...+||+|+|.. ++.++. .+++..+|+.+++.|+ |||+|
T Consensus 96 ------------------------------------~~~~~~fD~i~~~~-~l~~~~-~~~~~~~l~~~~~~Lk-pgG~l 136 (240)
T 3dli_A 96 ------------------------------------SLPDKYLDGVMISH-FVEHLD-PERLFELLSLCYSKMK-YSSYI 136 (240)
T ss_dssp ------------------------------------TSCTTCBSEEEEES-CGGGSC-GGGHHHHHHHHHHHBC-TTCCE
T ss_pred ------------------------------------hcCCCCeeEEEECC-chhhCC-cHHHHHHHHHHHHHcC-CCcEE
Confidence 02256799999964 677765 5688999999999999 99999
Q ss_pred EEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCc
Q 045407 274 VMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFR 353 (382)
Q Consensus 274 VfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~ 353 (382)
++...+...... + .. .| .++ .+.+.|+..+++.+|++|||+
T Consensus 137 ~~~~~~~~~~~~-~--~~-------~~----~~~-------------------------~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 137 VIESPNPTSLYS-L--IN-------FY----IDP-------------------------THKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp EEEEECTTSHHH-H--HH-------HT----TST-------------------------TCCSCCCHHHHHHHHHHHTCE
T ss_pred EEEeCCcchhHH-H--HH-------Hh----cCc-------------------------cccccCCHHHHHHHHHHCCCe
Confidence 997665332211 0 00 00 000 123678999999999999999
Q ss_pred EEEEE
Q 045407 354 SVHFW 358 (382)
Q Consensus 354 ~V~v~ 358 (382)
.+.+.
T Consensus 178 ~~~~~ 182 (240)
T 3dli_A 178 DVKIE 182 (240)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98874
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=8.8e-17 Score=148.68 Aligned_cols=161 Identities=14% Similarity=0.120 Sum_probs=111.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCC-cceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGY-SRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~-~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||.++..+++.|. +|+|||+|+.||+.|+++... .+. .++.++++|+.+++.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~----~~~~~~v~~~~~d~~~~~~----------- 131 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEA----KGVSDNMQFIHCAAQDVAS----------- 131 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-----CCGGGEEEEESCGGGTGG-----------
T ss_pred CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh----cCCCcceEEEEcCHHHhhh-----------
Confidence 67899999999999999999974 799999999999999998532 121 479999999877651
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+...+||+|++.+ ++.|+.+ ...+|+.+++.|+ |||+
T Consensus 132 --------------------------------------~~~~~fD~v~~~~-~l~~~~~---~~~~l~~~~~~Lk-pgG~ 168 (285)
T 4htf_A 132 --------------------------------------HLETPVDLILFHA-VLEWVAD---PRSVLQTLWSVLR-PGGV 168 (285)
T ss_dssp --------------------------------------GCSSCEEEEEEES-CGGGCSC---HHHHHHHHHHTEE-EEEE
T ss_pred --------------------------------------hcCCCceEEEECc-hhhcccC---HHHHHHHHHHHcC-CCeE
Confidence 1246799999964 6667654 4789999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|++-..+........ .....+.++... ..... .. .....+.|++.+++.+|++|||
T Consensus 169 l~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~----------~~------~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 169 LSLMFYNAHGLLMHN---MVAGNFDYVQAG-----MPKKK----------KR------TLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp EEEEEEBHHHHHHHH---HHTTCHHHHHTT-----CCCC--------------------CCCSCCBCHHHHHHHHHHTTC
T ss_pred EEEEEeCCchHHHHH---HHhcCHHHHhhh-----ccccc----------cc------cCCCCCCCCHHHHHHHHHHCCC
Confidence 999765432211100 000111111100 00000 00 0012368999999999999999
Q ss_pred cEEEEE
Q 045407 353 RSVHFW 358 (382)
Q Consensus 353 ~~V~v~ 358 (382)
+.+.+.
T Consensus 225 ~v~~~~ 230 (285)
T 4htf_A 225 QIMGKT 230 (285)
T ss_dssp EEEEEE
T ss_pred ceeeee
Confidence 998764
No 33
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.70 E-value=2.5e-16 Score=142.27 Aligned_cols=177 Identities=14% Similarity=0.122 Sum_probs=119.7
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc
Q 045407 83 KFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG 162 (382)
Q Consensus 83 ~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~ 162 (382)
....|+.......+-...+...+.....-..+.+|||+|||||.++..+++.++. +|+|||+|+.|++.|+++... .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~-~~ 93 (257)
T 3f4k_A 16 ICNYFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVK-AN 93 (257)
T ss_dssp HHHHHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHH-TT
T ss_pred HHHHHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHH-cC
Confidence 4455555543333333444444443212222458999999999999999999874 899999999999999998533 11
Q ss_pred CCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc
Q 045407 163 ADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF 242 (382)
Q Consensus 163 ~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af 242 (382)
-..++.++++|+.+++ +...+||+|+|.
T Consensus 94 --~~~~~~~~~~d~~~~~--------------------------------------------------~~~~~fD~v~~~ 121 (257)
T 3f4k_A 94 --CADRVKGITGSMDNLP--------------------------------------------------FQNEELDLIWSE 121 (257)
T ss_dssp --CTTTEEEEECCTTSCS--------------------------------------------------SCTTCEEEEEEE
T ss_pred --CCCceEEEECChhhCC--------------------------------------------------CCCCCEEEEEec
Confidence 1236999999997665 124679999998
Q ss_pred cchhcccCChhHHHHHHHHHHhhccCCCcEEEEecc--CCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEe
Q 045407 243 NYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLY--GGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHL 320 (382)
Q Consensus 243 n~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~--gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~ 320 (382)
. ++.++ +...+|+.+++.|+ |||++++-.. ........+ .-.|..
T Consensus 122 ~-~l~~~----~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~---------~~~~~~------------------ 168 (257)
T 3f4k_A 122 G-AIYNI----GFERGMNEWSKYLK-KGGFIAVSEASWFTSERPAEI---------EDFWMD------------------ 168 (257)
T ss_dssp S-CSCCC----CHHHHHHHHHTTEE-EEEEEEEEEEEESSSCCCHHH---------HHHHHH------------------
T ss_pred C-hHhhc----CHHHHHHHHHHHcC-CCcEEEEEEeeccCCCChHHH---------HHHHHH------------------
Confidence 5 55555 46789999999999 9999998431 110000000 001211
Q ss_pred ecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 321 QKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 321 ~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
. + -.+++++++..+|++|||+.+.++
T Consensus 169 -----~----~---~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 169 -----A----Y---PEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp -----H----C---TTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred -----h----C---CCCCCHHHHHHHHHHCCCeEEEEE
Confidence 0 0 125789999999999999999976
No 34
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.69 E-value=7.3e-17 Score=142.58 Aligned_cols=100 Identities=20% Similarity=0.140 Sum_probs=83.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||+|.++..+++++. +|+|+|+|+.|++.|+++.. .++.++++|+.+++
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~~------------- 102 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSFE------------- 102 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSCC-------------
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhcC-------------
Confidence 45799999999999999999974 79999999999999999852 37889999998766
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
. ..+||+|++.+ ++.++.+ .+...+++.+++.|+ |||++
T Consensus 103 ----~----------------------------------~~~fD~v~~~~-~l~~~~~-~~~~~~l~~~~~~Lk-pgG~l 141 (220)
T 3hnr_A 103 ----V----------------------------------PTSIDTIVSTY-AFHHLTD-DEKNVAIAKYSQLLN-KGGKI 141 (220)
T ss_dssp ----C----------------------------------CSCCSEEEEES-CGGGSCH-HHHHHHHHHHHHHSC-TTCEE
T ss_pred ----C----------------------------------CCCeEEEEECc-chhcCCh-HHHHHHHHHHHHhcC-CCCEE
Confidence 1 26799999885 7777665 344668999999999 99999
Q ss_pred EEec
Q 045407 274 VMDL 277 (382)
Q Consensus 274 VfDl 277 (382)
++-.
T Consensus 142 ~i~~ 145 (220)
T 3hnr_A 142 VFAD 145 (220)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9953
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.69 E-value=7.9e-17 Score=147.64 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=97.7
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc
Q 045407 83 KFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG 162 (382)
Q Consensus 83 ~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~ 162 (382)
....|+.......+....+...+.....-..+.+|||+|||||.++..+++.+ ..+|+|||+|+.||+.|+++... .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~-~~ 93 (267)
T 3kkz_A 16 ICDFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHV-TGQVTGLDFLSGFIDIFNRNARQ-SG 93 (267)
T ss_dssp HHHHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTC-SSEEEEEESCHHHHHHHHHHHHH-TT
T ss_pred HHHHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhcc-CCEEEEEeCCHHHHHHHHHHHHH-cC
Confidence 34455555444444445555555432212335689999999999999999994 35899999999999999998533 11
Q ss_pred CCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc
Q 045407 163 ADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF 242 (382)
Q Consensus 163 ~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af 242 (382)
-..+|.++++|+.+++ +...+||+|+|.
T Consensus 94 --~~~~v~~~~~d~~~~~--------------------------------------------------~~~~~fD~i~~~ 121 (267)
T 3kkz_A 94 --LQNRVTGIVGSMDDLP--------------------------------------------------FRNEELDLIWSE 121 (267)
T ss_dssp --CTTTEEEEECCTTSCC--------------------------------------------------CCTTCEEEEEES
T ss_pred --CCcCcEEEEcChhhCC--------------------------------------------------CCCCCEEEEEEc
Confidence 1246999999997765 124679999988
Q ss_pred cchhcccCChhHHHHHHHHHHhhccCCCcEEEEe
Q 045407 243 NYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 243 n~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
+ ++.++ +...+|+.++++|+ |||++++-
T Consensus 122 ~-~~~~~----~~~~~l~~~~~~Lk-pgG~l~~~ 149 (267)
T 3kkz_A 122 G-AIYNI----GFERGLNEWRKYLK-KGGYLAVS 149 (267)
T ss_dssp S-CGGGT----CHHHHHHHHGGGEE-EEEEEEEE
T ss_pred C-Cceec----CHHHHHHHHHHHcC-CCCEEEEE
Confidence 6 55555 46789999999999 99999983
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.69 E-value=1.2e-16 Score=141.77 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=93.0
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc-ccCCCCcceEEEeccCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK-VGADGYSRISLFHGNVL 177 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k-l~~d~~~RI~l~~gDV~ 177 (382)
.++.+++... .+.+|||+|||||.++..|++.++..+|+|||+|+.|++.|+++.... +......++.++++|+.
T Consensus 19 ~~l~~~l~~~----~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 19 GTVVAVLKSV----NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHT----TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHhhc----CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 5555555432 245799999999999999999987678999999999999999985321 10000127999999985
Q ss_pred CchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHH
Q 045407 178 QPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVL 257 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~ 257 (382)
.++ . ...+||+|+|.+ ++.|+ ...++..
T Consensus 95 ~~~-----------------~---------------------------------~~~~fD~V~~~~-~l~~~-~~~~~~~ 122 (219)
T 3jwg_A 95 YRD-----------------K---------------------------------RFSGYDAATVIE-VIEHL-DENRLQA 122 (219)
T ss_dssp SCC-----------------G---------------------------------GGTTCSEEEEES-CGGGC-CHHHHHH
T ss_pred ccc-----------------c---------------------------------ccCCCCEEEEHH-HHHhC-CHHHHHH
Confidence 554 1 146799999765 77777 4467899
Q ss_pred HHHHHHhhccCCCcEEEEecc
Q 045407 258 YFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 258 yFr~V~~~L~~pGGiFVfDl~ 278 (382)
+++.+++.|+ |||+||.-.+
T Consensus 123 ~l~~~~~~Lk-pgG~~i~~~~ 142 (219)
T 3jwg_A 123 FEKVLFEFTR-PQTVIVSTPN 142 (219)
T ss_dssp HHHHHHTTTC-CSEEEEEEEB
T ss_pred HHHHHHHhhC-CCEEEEEccc
Confidence 9999999999 9998887543
No 37
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=1.6e-16 Score=143.52 Aligned_cols=144 Identities=13% Similarity=0.053 Sum_probs=108.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..|++.+. .+|+|+|+|+.||+.|+++.... +..++.++++|+.+++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~------------- 141 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF-REVDMVDITEDFLVQAKTYLGEE----GKRVRNYFCCGLQDFT------------- 141 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC-SEEEEEESCHHHHHHHHHHTGGG----GGGEEEEEECCGGGCC-------------
T ss_pred CCEEEEECCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHhhhc----CCceEEEEEcChhhcC-------------
Confidence 56899999999999999999874 58999999999999999986331 1347899999986554
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ ...+||+|++.+ ++.|+.+ .++..+|+.+++.|+ |||+|
T Consensus 142 ----~---------------------------------~~~~fD~v~~~~-~l~~~~~-~~~~~~l~~~~~~Lk-pgG~l 181 (241)
T 2ex4_A 142 ----P---------------------------------EPDSYDVIWIQW-VIGHLTD-QHLAEFLRRCKGSLR-PNGII 181 (241)
T ss_dssp ----C---------------------------------CSSCEEEEEEES-CGGGSCH-HHHHHHHHHHHHHEE-EEEEE
T ss_pred ----C---------------------------------CCCCEEEEEEcc-hhhhCCH-HHHHHHHHHHHHhcC-CCeEE
Confidence 1 134799999875 6777654 567899999999999 99999
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|+ |.... . ..+|.. ... ...++..+++++|++|||
T Consensus 182 ~i~~~~~~--------------~-~~~~~~-------------------~~~----------~~~~~~~~~~~~l~~aGf 217 (241)
T 2ex4_A 182 VIKDNMAQ--------------E-GVILDD-------------------VDS----------SVCRDLDVVRRIICSAGL 217 (241)
T ss_dssp EEEEEEBS--------------S-SEEEET-------------------TTT----------EEEEBHHHHHHHHHHTTC
T ss_pred EEEEccCC--------------C-cceecc-------------------cCC----------cccCCHHHHHHHHHHcCC
Confidence 98 43211 0 011211 011 123489999999999999
Q ss_pred cEEEEEe
Q 045407 353 RSVHFWL 359 (382)
Q Consensus 353 ~~V~v~~ 359 (382)
+.+.+..
T Consensus 218 ~~~~~~~ 224 (241)
T 2ex4_A 218 SLLAEER 224 (241)
T ss_dssp CEEEEEE
T ss_pred eEEEeee
Confidence 9998853
No 38
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.68 E-value=5.7e-16 Score=136.79 Aligned_cols=117 Identities=14% Similarity=0.115 Sum_probs=96.1
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
.+..++........+.+|||+|||||.++..|++.+. +|+|+|+|+.||+.|+++... ..++.++++|+.++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~ 109 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQF 109 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhC
Confidence 3344444444444457899999999999999999984 799999999999999998532 23799999998766
Q ss_pred hhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHH
Q 045407 180 LEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYF 259 (382)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yF 259 (382)
. . ..+||+|+|. .++.|+.+.+++..+|
T Consensus 110 ~-----------------~----------------------------------~~~fD~v~~~-~~l~~~~~~~~~~~~l 137 (216)
T 3ofk_A 110 S-----------------T----------------------------------AELFDLIVVA-EVLYYLEDMTQMRTAI 137 (216)
T ss_dssp C-----------------C----------------------------------SCCEEEEEEE-SCGGGSSSHHHHHHHH
T ss_pred C-----------------C----------------------------------CCCccEEEEc-cHHHhCCCHHHHHHHH
Confidence 5 1 4679999997 5888999999999999
Q ss_pred HHHHhhccCCCcEEEEec
Q 045407 260 KHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 260 r~V~~~L~~pGGiFVfDl 277 (382)
+.+++.|+ |||+|++..
T Consensus 138 ~~~~~~L~-pgG~l~~~~ 154 (216)
T 3ofk_A 138 DNMVKMLA-PGGHLVFGS 154 (216)
T ss_dssp HHHHHTEE-EEEEEEEEE
T ss_pred HHHHHHcC-CCCEEEEEe
Confidence 99999999 999999954
No 39
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=8.9e-16 Score=131.18 Aligned_cols=128 Identities=16% Similarity=0.227 Sum_probs=104.5
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++. .++.++++|+.+++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~---------~~~~~~~~d~~~~~------------- 102 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDF---------PEARWVVGDLSVDQ------------- 102 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTSC-------------
T ss_pred CCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhC---------CCCcEEEcccccCC-------------
Confidence 45799999999999999999974 7999999999999999874 25889999987654
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ ....||+|++....+.++ ..+++..+++.+++.|+ |||++
T Consensus 103 ----~---------------------------------~~~~~D~i~~~~~~~~~~-~~~~~~~~l~~~~~~l~-~~G~l 143 (195)
T 3cgg_A 103 ----I---------------------------------SETDFDLIVSAGNVMGFL-AEDGREPALANIHRALG-ADGRA 143 (195)
T ss_dssp ----C---------------------------------CCCCEEEEEECCCCGGGS-CHHHHHHHHHHHHHHEE-EEEEE
T ss_pred ----C---------------------------------CCCceeEEEECCcHHhhc-ChHHHHHHHHHHHHHhC-CCCEE
Confidence 1 245799999875566655 55788999999999999 99999
Q ss_pred EEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCc
Q 045407 274 VMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFR 353 (382)
Q Consensus 274 VfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~ 353 (382)
++.+... +.|+.+++..+|+++||+
T Consensus 144 ~~~~~~~-------------------------------------------------------~~~~~~~~~~~l~~~Gf~ 168 (195)
T 3cgg_A 144 VIGFGAG-------------------------------------------------------RGWVFGDFLEVAERVGLE 168 (195)
T ss_dssp EEEEETT-------------------------------------------------------SSCCHHHHHHHHHHHTEE
T ss_pred EEEeCCC-------------------------------------------------------CCcCHHHHHHHHHHcCCE
Confidence 9854210 017889999999999999
Q ss_pred EEEEEe
Q 045407 354 SVHFWL 359 (382)
Q Consensus 354 ~V~v~~ 359 (382)
.++++.
T Consensus 169 ~~~~~~ 174 (195)
T 3cgg_A 169 LENAFE 174 (195)
T ss_dssp EEEEES
T ss_pred Eeeeec
Confidence 888863
No 40
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.68 E-value=1.4e-16 Score=139.32 Aligned_cols=158 Identities=13% Similarity=0.051 Sum_probs=113.9
Q ss_pred cccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhc
Q 045407 116 HLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRN 195 (382)
Q Consensus 116 ~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~ 195 (382)
+|||+|||+|.++..+++.|. +|+|+|+|+.|++.|+++... .+.++.++++|+.+++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~--------------- 89 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQE-----KGVKITTVQSNLADFD--------------- 89 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHH-----HTCCEEEECCBTTTBS---------------
T ss_pred CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHh-----cCCceEEEEcChhhcC---------------
Confidence 799999999999999999975 799999999999999998532 1137899999987665
Q ss_pred cccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEE
Q 045407 196 ISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 196 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVf 275 (382)
+....||+|++. +.++ ..++...+++.+++.|+ |||+|++
T Consensus 90 -----------------------------------~~~~~fD~v~~~---~~~~-~~~~~~~~l~~~~~~L~-pgG~l~~ 129 (202)
T 2kw5_A 90 -----------------------------------IVADAWEGIVSI---FCHL-PSSLRQQLYPKVYQGLK-PGGVFIL 129 (202)
T ss_dssp -----------------------------------CCTTTCSEEEEE---CCCC-CHHHHHHHHHHHHTTCC-SSEEEEE
T ss_pred -----------------------------------CCcCCccEEEEE---hhcC-CHHHHHHHHHHHHHhcC-CCcEEEE
Confidence 124679999984 3444 56789999999999999 9999999
Q ss_pred eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEE
Q 045407 276 DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSV 355 (382)
Q Consensus 276 Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V 355 (382)
..+...... |.. +. . ...++.|+..+|+.+|+ ||+.+
T Consensus 130 ~~~~~~~~~---------------~~~--------------------~~-~-----~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 130 EGFAPEQLQ---------------YNT--------------------GG-P-----KDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp EEECTTTGG---------------GTS--------------------CC-S-----SSGGGCCCHHHHHHHCS--SSCEE
T ss_pred EEecccccc---------------CCC--------------------CC-C-----CcceeecCHHHHHHHhc--CceEE
Confidence 776432210 000 00 0 01135799999999998 99999
Q ss_pred EEEeccCchhhhhccccCcCcccc
Q 045407 356 HFWLREMPDAREMRNTEGLGGFSR 379 (382)
Q Consensus 356 ~v~~r~~~~~~~~~~~~~~~~~~~ 379 (382)
.+.-...+ ..+.....++..|-|
T Consensus 167 ~~~~~~~~-~~~g~~~~~~~~~i~ 189 (202)
T 2kw5_A 167 IANNLERN-LDEGAYHQGKAALIQ 189 (202)
T ss_dssp EEEEEEEE-CSCSSSSCCEEEEEE
T ss_pred EEEEEEee-cCCCCCcccHHHHHH
Confidence 87533322 233344445555544
No 41
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.68 E-value=1.2e-16 Score=149.58 Aligned_cols=118 Identities=12% Similarity=0.030 Sum_probs=91.8
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
.+..++.. .+-....+|||+|||||.++..+++. | .+|+|||+|++||+.|+++... .+ -..+|.++++|+.+
T Consensus 60 ~~~~~~~~-~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~-~~--~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 60 KRKLALDK-LNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDE-VD--SPRRKEVRIQGWEE 133 (302)
T ss_dssp HHHHHHHT-TCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHH-SC--CSSCEEEEECCGGG
T ss_pred HHHHHHHH-cCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHh-cC--CCCceEEEECCHHH
Confidence 44444443 33333458999999999999999998 6 5899999999999999998533 11 12379999999854
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh------
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR------ 252 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r------ 252 (382)
+ .++||+|++.. ++.++.++
T Consensus 134 ~-----------------------------------------------------~~~fD~v~~~~-~~~~~~d~~~~~~~ 159 (302)
T 3hem_A 134 F-----------------------------------------------------DEPVDRIVSLG-AFEHFADGAGDAGF 159 (302)
T ss_dssp C-----------------------------------------------------CCCCSEEEEES-CGGGTTCCSSCCCT
T ss_pred c-----------------------------------------------------CCCccEEEEcc-hHHhcCccccccch
Confidence 3 25799999884 77787655
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEecc
Q 045407 253 ADLVLYFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 253 ~dL~~yFr~V~~~L~~pGGiFVfDl~ 278 (382)
+++..+|+.++++|+ |||+|++-..
T Consensus 160 ~~~~~~l~~~~~~Lk-pgG~l~i~~~ 184 (302)
T 3hem_A 160 ERYDTFFKKFYNLTP-DDGRMLLHTI 184 (302)
T ss_dssp THHHHHHHHHHHSSC-TTCEEEEEEE
T ss_pred hHHHHHHHHHHHhcC-CCcEEEEEEE
Confidence 788999999999999 9999999544
No 42
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.67 E-value=3e-16 Score=146.68 Aligned_cols=122 Identities=16% Similarity=0.224 Sum_probs=91.2
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccc--------cccC-----CCC
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLN--------KVGA-----DGY 166 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~--------kl~~-----d~~ 166 (382)
.+.+++........+.+|||+|||||.++..|++.|. +|+|||+|+.||+.|++++.. ..+. ...
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS 132 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCC
Confidence 4444444332223356799999999999999999995 799999999999999887521 0000 012
Q ss_pred cceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchh
Q 045407 167 SRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSC 246 (382)
Q Consensus 167 ~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~ 246 (382)
.+|.++++|+.+++. . ..++||+|++. .++
T Consensus 133 ~~i~~~~~D~~~l~~-----------------~--------------------------------~~~~FD~V~~~-~~l 162 (252)
T 2gb4_A 133 GSISLYCCSIFDLPR-----------------A--------------------------------NIGKFDRIWDR-GAL 162 (252)
T ss_dssp SSEEEEESCTTTGGG-----------------G--------------------------------CCCCEEEEEES-SST
T ss_pred CceEEEECccccCCc-----------------c--------------------------------cCCCEEEEEEh-hhh
Confidence 579999999988761 0 02679999985 477
Q ss_pred cccCChhHHHHHHHHHHhhccCCCcEEEE
Q 045407 247 CCLHKRADLVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 247 ~yL~~r~dL~~yFr~V~~~L~~pGGiFVf 275 (382)
++|+ .++...++++++++|+ |||+|++
T Consensus 163 ~~l~-~~~~~~~l~~~~~~Lk-pGG~l~l 189 (252)
T 2gb4_A 163 VAIN-PGDHDRYADIILSLLR-KEFQYLV 189 (252)
T ss_dssp TTSC-GGGHHHHHHHHHHTEE-EEEEEEE
T ss_pred hhCC-HHHHHHHHHHHHHHcC-CCeEEEE
Confidence 7875 4677899999999999 9999975
No 43
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.67 E-value=2.9e-16 Score=138.59 Aligned_cols=141 Identities=12% Similarity=0.085 Sum_probs=107.0
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++.+ +..+|+|+|+|+.|++.|+++... .+..++.++++|+.+++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~~d~~~~~------------ 101 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK----LGLKNVEVLKSEENKIP------------ 101 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH----HTCTTEEEEECBTTBCS------------
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH----cCCCcEEEEecccccCC------------
Confidence 4589999999999999999997 556899999999999999998533 12237999999987655
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+....||+|++.+ ++.++. +...+++.+++.|+ |||+
T Consensus 102 --------------------------------------~~~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~Lk-pgG~ 138 (219)
T 3dh0_A 102 --------------------------------------LPDNTVDFIFMAF-TFHELS---EPLKFLEELKRVAK-PFAY 138 (219)
T ss_dssp --------------------------------------SCSSCEEEEEEES-CGGGCS---SHHHHHHHHHHHEE-EEEE
T ss_pred --------------------------------------CCCCCeeEEEeeh-hhhhcC---CHHHHHHHHHHHhC-CCeE
Confidence 1246799999875 555554 56789999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
+++-.+.... . . .+. . ..+.|+..+++.+|+++||
T Consensus 139 l~i~~~~~~~------------~----------~---------------~~~-~-------~~~~~~~~~~~~~l~~~Gf 173 (219)
T 3dh0_A 139 LAIIDWKKEE------------R----------D---------------KGP-P-------PEEVYSEWEVGLILEDAGI 173 (219)
T ss_dssp EEEEEECSSC------------C----------S---------------SSC-C-------GGGSCCHHHHHHHHHHTTC
T ss_pred EEEEEecccc------------c----------c---------------cCC-c-------hhcccCHHHHHHHHHHCCC
Confidence 9983221100 0 0 000 0 1146799999999999999
Q ss_pred cEEEEE
Q 045407 353 RSVHFW 358 (382)
Q Consensus 353 ~~V~v~ 358 (382)
+.+.++
T Consensus 174 ~~~~~~ 179 (219)
T 3dh0_A 174 RVGRVV 179 (219)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
No 44
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.67 E-value=4.9e-16 Score=144.55 Aligned_cols=163 Identities=14% Similarity=0.052 Sum_probs=104.1
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC-------------CC-------------C
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA-------------DG-------------Y 166 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~-------------d~-------------~ 166 (382)
.+.+|||+|||||.++..+++... .+|+|||+|+.||+.|+++.....+. .+ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF-EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC-SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCC-CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 356899999999996554444333 48999999999999998864210000 00 0
Q ss_pred cceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchh
Q 045407 167 SRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSC 246 (382)
Q Consensus 167 ~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~ 246 (382)
..+.++++|+.++.. +. ...+...+||+|+|.+ ++
T Consensus 150 ~~~~~~~~D~~~~~~----------------~~----------------------------~~~~~~~~fD~V~~~~-~l 184 (289)
T 2g72_A 150 RVKRVLPIDVHQPQP----------------LG----------------------------AGSPAPLPADALVSAF-CL 184 (289)
T ss_dssp HEEEEECCCTTSSST----------------TC----------------------------SSCSSCSSEEEEEEES-CH
T ss_pred hhceEEecccCCCCC----------------cc----------------------------ccccCCCCCCEEEehh-hh
Confidence 014566667765220 10 0012235699999987 44
Q ss_pred cccC-ChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccc
Q 045407 247 CCLH-KRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQK 325 (382)
Q Consensus 247 ~yL~-~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~ 325 (382)
.++. +.+++..+|++++++|+ |||+||+... .... +|. . +.
T Consensus 185 ~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~~--------------~~~~--~~~------------------~--~~- 226 (289)
T 2g72_A 185 EAVSPDLASFQRALDHITTLLR-PGGHLLLIGA--------------LEES--WYL------------------A--GE- 226 (289)
T ss_dssp HHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEE--------------ESCC--EEE------------------E--TT-
T ss_pred hhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEEe--------------cCcc--eEE------------------c--CC-
Confidence 4433 35789999999999999 9999999410 0000 000 0 11
Q ss_pred eeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEEeccCch
Q 045407 326 KLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWLREMPD 364 (382)
Q Consensus 326 ~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~r~~~~ 364 (382)
. .+..+.|++.+|+++|++|||+.+.+..-.+|.
T Consensus 227 ~-----~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~ 260 (289)
T 2g72_A 227 A-----RLTVVPVSEEEVREALVRSGYKVRDLRTYIMPA 260 (289)
T ss_dssp E-----EEECCCCCHHHHHHHHHHTTEEEEEEEEEECCG
T ss_pred e-----eeeeccCCHHHHHHHHHHcCCeEEEeeEeeccc
Confidence 0 122467899999999999999999886544433
No 45
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.67 E-value=4.3e-16 Score=140.64 Aligned_cols=157 Identities=17% Similarity=0.109 Sum_probs=108.8
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC-------------CC------------C
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA-------------DG------------Y 166 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~-------------d~------------~ 166 (382)
..+.+|||+|||||.++..+++.++ .+|+|+|+|+.||+.|+++....-.. .+ .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3356899999999999999999986 47999999999999999875321000 00 0
Q ss_pred cce-EEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccch
Q 045407 167 SRI-SLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYS 245 (382)
Q Consensus 167 ~RI-~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S 245 (382)
.+| .++++|+.++.. + .....++||+|++.+ +
T Consensus 134 ~~v~~~~~~d~~~~~~----------------~------------------------------~~~~~~~fD~v~~~~-~ 166 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQP----------------L------------------------------GGVSLPPADCLLSTL-C 166 (265)
T ss_dssp HHEEEEEECCTTSSST----------------T------------------------------TTCCCCCEEEEEEES-C
T ss_pred hhheeEEEeeeccCCC----------------C------------------------------CccccCCccEEEEhh-h
Confidence 137 889999877541 0 001136799999876 3
Q ss_pred hcccC-ChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeeccc
Q 045407 246 CCCLH-KRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQ 324 (382)
Q Consensus 246 ~~yL~-~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~ 324 (382)
+.+++ ...+...+|++++++|+ |||+||+-...+ ++ +... +.
T Consensus 167 l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~-------------~~--~~~~---------------------~~ 209 (265)
T 2i62_A 167 LDAACPDLPAYRTALRNLGSLLK-PGGFLVMVDALK-------------SS--YYMI---------------------GE 209 (265)
T ss_dssp HHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEESS-------------CC--EEEE---------------------TT
T ss_pred hhhhcCChHHHHHHHHHHHhhCC-CCcEEEEEecCC-------------Cc--eEEc---------------------CC
Confidence 33332 56789999999999999 999999954211 11 1110 11
Q ss_pred ceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEEe
Q 045407 325 KKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 325 ~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~ 359 (382)
..+..+.++.+++.++|++|||+.+.+..
T Consensus 210 ------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 210 ------QKFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp ------EEEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred ------ccccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 01122567899999999999999988754
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=2.9e-16 Score=141.79 Aligned_cols=149 Identities=13% Similarity=0.229 Sum_probs=106.0
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
....+|||+|||||.++..|++.. ..+|+|+|+|+.||+.|+++... .+ -..+|.++++|+.+++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~-~~--~~~~v~~~~~d~~~~~----------- 99 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEE-LG--VSERVHFIHNDAAGYV----------- 99 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHH-TT--CTTTEEEEESCCTTCC-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh-cC--CCcceEEEECChHhCC-----------
Confidence 334689999999999999999874 24799999999999999988532 11 1137999999997765
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
+ ...||+|+|.. ++.++. +...+|+.++++|+ |||
T Consensus 100 ---------------------------------------~-~~~fD~V~~~~-~~~~~~---~~~~~l~~~~r~Lk-pgG 134 (256)
T 1nkv_A 100 ---------------------------------------A-NEKCDVAACVG-ATWIAG---GFAGAEELLAQSLK-PGG 134 (256)
T ss_dssp ---------------------------------------C-SSCEEEEEEES-CGGGTS---SSHHHHHHHTTSEE-EEE
T ss_pred ---------------------------------------c-CCCCCEEEECC-ChHhcC---CHHHHHHHHHHHcC-CCe
Confidence 1 36799999954 555554 46888999999999 999
Q ss_pred EEEE-ecc-CCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHH
Q 045407 272 IFVM-DLY-GGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEE 349 (382)
Q Consensus 272 iFVf-Dl~-gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~Lee 349 (382)
++++ +.. ...+....+ .+ .|. .. ...+++++.++..+|++
T Consensus 135 ~l~~~~~~~~~~~~~~~~--~~-------~~~--------------------~~---------~~~~~~~~~~~~~~l~~ 176 (256)
T 1nkv_A 135 IMLIGEPYWRQLPATEEI--AQ-------ACG--------------------VS---------STSDFLTLPGLVGAFDD 176 (256)
T ss_dssp EEEEEEEEETTCCSSHHH--HH-------TTT--------------------CS---------CGGGSCCHHHHHHHHHT
T ss_pred EEEEecCcccCCCChHHH--HH-------HHh--------------------cc---------cccccCCHHHHHHHHHH
Confidence 9998 321 100000000 00 000 00 01257899999999999
Q ss_pred cCCcEEEEE
Q 045407 350 AGFRSVHFW 358 (382)
Q Consensus 350 AGF~~V~v~ 358 (382)
|||+.+.+.
T Consensus 177 aGf~~~~~~ 185 (256)
T 1nkv_A 177 LGYDVVEMV 185 (256)
T ss_dssp TTBCCCEEE
T ss_pred CCCeeEEEE
Confidence 999998874
No 47
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.66 E-value=4.5e-16 Score=136.13 Aligned_cols=156 Identities=10% Similarity=0.098 Sum_probs=107.9
Q ss_pred CCcccccCCCccHhHHHH-HHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEW-LRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~el-ar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||+|.++..+ ++.| .+|+|+|+|+.||+.|+++.... +.++.++++|+.+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~------------ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIRKLP------------ 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTTSCC------------
T ss_pred CCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchhhCC------------
Confidence 467999999999985544 4555 58999999999999999885321 146889999997655
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+...+||+|++.+ ++.|+. .++....++.++++|+ |||+
T Consensus 85 --------------------------------------~~~~~fD~v~~~~-~l~~~~-~~~~~~~l~~~~~~Lk-pgG~ 123 (209)
T 2p8j_A 85 --------------------------------------FKDESMSFVYSYG-TIFHMR-KNDVKEAIDEIKRVLK-PGGL 123 (209)
T ss_dssp --------------------------------------SCTTCEEEEEECS-CGGGSC-HHHHHHHHHHHHHHEE-EEEE
T ss_pred --------------------------------------CCCCceeEEEEcC-hHHhCC-HHHHHHHHHHHHHHcC-CCcE
Confidence 1246799999875 666664 6789999999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|++..+....... ..+.. +|+. .|. . ..+. .....+.|+..|++.+|+++||
T Consensus 124 l~~~~~~~~~~~~-------~~~~~-~~~~-~~~--------~----~~~~-------~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 124 ACINFLTTKDERY-------NKGEK-IGEG-EFL--------Q----LERG-------EKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp EEEEEEETTSTTT-------TCSEE-EETT-EEE--------E----CC-C-------CCEEEEEECHHHHHHTTTTSEE
T ss_pred EEEEEecccchhc-------cchhh-hccc-cce--------e----ccCC-------CceeEEecCHHHHHHHHhhcCc
Confidence 9997764221100 01111 1211 000 0 0011 1112378999999999999999
Q ss_pred cEEEE
Q 045407 353 RSVHF 357 (382)
Q Consensus 353 ~~V~v 357 (382)
.....
T Consensus 176 ~~~~~ 180 (209)
T 2p8j_A 176 LFKED 180 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 77665
No 48
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=4.8e-16 Score=143.58 Aligned_cols=152 Identities=18% Similarity=0.161 Sum_probs=108.1
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+.+|||+|||||.++..+++.+ .+|+|+|+|+.||+.|+++. .++.++++|+.+++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~------------ 113 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR------------ 113 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC------------
T ss_pred CCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC------------
Confidence 35689999999999999999965 58999999999999999874 26889999987655
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+ ..+||+|++.. ++.|+. +....|+.++++|+ |||+
T Consensus 114 -----~----------------------------------~~~fD~v~~~~-~l~~~~---d~~~~l~~~~~~Lk-pgG~ 149 (279)
T 3ccf_A 114 -----V----------------------------------DKPLDAVFSNA-MLHWVK---EPEAAIASIHQALK-SGGR 149 (279)
T ss_dssp -----C----------------------------------SSCEEEEEEES-CGGGCS---CHHHHHHHHHHHEE-EEEE
T ss_pred -----c----------------------------------CCCcCEEEEcc-hhhhCc---CHHHHHHHHHHhcC-CCcE
Confidence 1 35799999864 666665 45688999999999 9999
Q ss_pred EEEeccCCCchhhhh-HhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcC
Q 045407 273 FVMDLYGGTSSEQKL-RLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAG 351 (382)
Q Consensus 273 FVfDl~gg~s~e~kl-~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAG 351 (382)
|++...+........ ......... -|. + . .....++.++..+++.+|++||
T Consensus 150 l~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~-----------------~------~~~~~~~~~~~~~~~~~l~~aG 201 (279)
T 3ccf_A 150 FVAEFGGKGNIKYILEALYNALETL--GIH---N-----------------P------QALNPWYFPSIGEYVNILEKQG 201 (279)
T ss_dssp EEEEEECTTTTHHHHHHHHHHHHHH--TCC---C-----------------G------GGGCCCCCCCHHHHHHHHHHHT
T ss_pred EEEEecCCcchHHHHHHHHHHHHhc--CCc---c-----------------c------cCcCceeCCCHHHHHHHHHHcC
Confidence 999776432211000 000000000 000 0 0 0112346889999999999999
Q ss_pred CcEEEEEe
Q 045407 352 FRSVHFWL 359 (382)
Q Consensus 352 F~~V~v~~ 359 (382)
|+.+.+..
T Consensus 202 f~~~~~~~ 209 (279)
T 3ccf_A 202 FDVTYAAL 209 (279)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 99988653
No 49
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.65 E-value=9e-17 Score=147.31 Aligned_cols=119 Identities=17% Similarity=0.163 Sum_probs=91.2
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
..+..++.....-..+.+|||+|||||.++..+++.++..+|+|+|+|+.|++.|+++... .+..++.++++|+.+
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~~d~~~ 98 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEK----NGIKNVKFLQANIFS 98 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH----TTCCSEEEEECCGGG
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----cCCCCcEEEEccccc
Confidence 3444444432222335689999999999999999998778999999999999999998532 122479999999876
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHH
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLY 258 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~y 258 (382)
++ +...+||+|++.+ ++.++.+. ...
T Consensus 99 ~~--------------------------------------------------~~~~~fD~v~~~~-~l~~~~~~---~~~ 124 (276)
T 3mgg_A 99 LP--------------------------------------------------FEDSSFDHIFVCF-VLEHLQSP---EEA 124 (276)
T ss_dssp CC--------------------------------------------------SCTTCEEEEEEES-CGGGCSCH---HHH
T ss_pred CC--------------------------------------------------CCCCCeeEEEEec-hhhhcCCH---HHH
Confidence 55 1246799999875 66666554 578
Q ss_pred HHHHHhhccCCCcEEEEe
Q 045407 259 FKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfD 276 (382)
++.+++.|+ |||+|++-
T Consensus 125 l~~~~~~L~-pgG~l~~~ 141 (276)
T 3mgg_A 125 LKSLKKVLK-PGGTITVI 141 (276)
T ss_dssp HHHHHHHEE-EEEEEEEE
T ss_pred HHHHHHHcC-CCcEEEEE
Confidence 999999999 99999983
No 50
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=3.6e-16 Score=141.04 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=84.4
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|||+|||||.++..+++..+..+|+|+|+|+.||+.|+++. .++.++++|+.+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~----------- 91 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATWK----------- 91 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTCC-----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhcC-----------
Confidence 3456899999999999999999955468999999999999999872 36889999986543
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
....||+|++.. ++.|+. +....|++++++|+ |||
T Consensus 92 ----------------------------------------~~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~L~-pgG 126 (259)
T 2p35_A 92 ----------------------------------------PAQKADLLYANA-VFQWVP---DHLAVLSQLMDQLE-SGG 126 (259)
T ss_dssp ----------------------------------------CSSCEEEEEEES-CGGGST---THHHHHHHHGGGEE-EEE
T ss_pred ----------------------------------------ccCCcCEEEEeC-chhhCC---CHHHHHHHHHHhcC-CCe
Confidence 035699999864 666664 56789999999999 999
Q ss_pred EEEEeccC
Q 045407 272 IFVMDLYG 279 (382)
Q Consensus 272 iFVfDl~g 279 (382)
+|++-..+
T Consensus 127 ~l~~~~~~ 134 (259)
T 2p35_A 127 VLAVQMPD 134 (259)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCC
Confidence 99996643
No 51
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.64 E-value=1.2e-15 Score=139.26 Aligned_cols=157 Identities=11% Similarity=0.055 Sum_probs=109.1
Q ss_pred hCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccc
Q 045407 109 VGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYE 188 (382)
Q Consensus 109 ~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~ 188 (382)
.+-..+.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... + -..++.++++|+.+++
T Consensus 57 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-~--~~~~~~~~~~d~~~~~-------- 124 (273)
T 3bus_A 57 LDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA-G--LANRVTFSYADAMDLP-------- 124 (273)
T ss_dssp SCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT-T--CTTTEEEEECCTTSCC--------
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc-C--CCcceEEEECccccCC--------
Confidence 333335689999999999999999874 358999999999999999885321 1 1237999999997765
Q ss_pred hhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccC
Q 045407 189 PQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSK 268 (382)
Q Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~ 268 (382)
+...+||+|++.. ++.++.+ ...+|+.+++.|+
T Consensus 125 ------------------------------------------~~~~~fD~v~~~~-~l~~~~~---~~~~l~~~~~~L~- 157 (273)
T 3bus_A 125 ------------------------------------------FEDASFDAVWALE-SLHHMPD---RGRALREMARVLR- 157 (273)
T ss_dssp ------------------------------------------SCTTCEEEEEEES-CTTTSSC---HHHHHHHHHTTEE-
T ss_pred ------------------------------------------CCCCCccEEEEec-hhhhCCC---HHHHHHHHHHHcC-
Confidence 1246799999865 6666654 4788999999999
Q ss_pred CCcEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHH
Q 045407 269 KGGIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCL 347 (382)
Q Consensus 269 pGGiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~L 347 (382)
|||++++ ++....+..... .. .+..+|. .+ .+.+++++.+++.+|
T Consensus 158 pgG~l~i~~~~~~~~~~~~~--~~---~~~~~~~----------------------------~~-~~~~~~~~~~~~~~l 203 (273)
T 3bus_A 158 PGGTVAIADFVLLAPVEGAK--KE---AVDAFRA----------------------------GG-GVLSLGGIDEYESDV 203 (273)
T ss_dssp EEEEEEEEEEEESSCCCHHH--HH---HHHHHHH----------------------------HH-TCCCCCCHHHHHHHH
T ss_pred CCeEEEEEEeeccCCCChhH--HH---HHHHHHh----------------------------hc-CccCCCCHHHHHHHH
Confidence 9999998 443211110000 00 0000010 00 012579999999999
Q ss_pred HHcCCcEEEEE
Q 045407 348 EEAGFRSVHFW 358 (382)
Q Consensus 348 eeAGF~~V~v~ 358 (382)
++|||+.+.+.
T Consensus 204 ~~aGf~~~~~~ 214 (273)
T 3bus_A 204 RQAELVVTSTV 214 (273)
T ss_dssp HHTTCEEEEEE
T ss_pred HHcCCeEEEEE
Confidence 99999998865
No 52
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.64 E-value=1.3e-16 Score=150.33 Aligned_cols=117 Identities=18% Similarity=0.252 Sum_probs=86.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC------------------------------
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA------------------------------ 163 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~------------------------------ 163 (382)
+.+|||+|||||.++..+++..+..+|+|||+|+.||+.|+++.......
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 45799999999999999999954468999999999999999985331100
Q ss_pred -----------------------C-CCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccc
Q 045407 164 -----------------------D-GYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFT 219 (382)
Q Consensus 164 -----------------------d-~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 219 (382)
. -..+|.|+++|+...... +
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~---------------~--------------------- 170 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDD---------------L--------------------- 170 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHH---------------H---------------------
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccc---------------c---------------------
Confidence 0 002577777776543310 0
Q ss_pred cCCCCCcCccCCCCCCccEEEEccchhcccC---ChhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 220 ASSGDNCSKQKSSLPARDIICAFNYSCCCLH---KRADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 220 ~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~---~r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
..+..+.||+|+|++ ++.|+| ..+++..+|+.++++|+ |||+||+..
T Consensus 171 ---------~~~~~~~fD~I~~~~-vl~~ihl~~~~~~~~~~l~~~~~~Lk-pGG~lil~~ 220 (292)
T 3g07_A 171 ---------VEAQTPEYDVVLCLS-LTKWVHLNWGDEGLKRMFRRIYRHLR-PGGILVLEP 220 (292)
T ss_dssp ---------HTTCCCCEEEEEEES-CHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred ---------ccccCCCcCEEEECh-HHHHhhhcCCHHHHHHHHHHHHHHhC-CCcEEEEec
Confidence 002256799999987 556666 78899999999999999 999999964
No 53
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=5.6e-16 Score=140.40 Aligned_cols=151 Identities=15% Similarity=0.119 Sum_probs=108.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.+. +|+|+|+|+.|++.|+++... .+..++.++++|+.+++
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~~~d~~~~~------------- 82 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQE----KGVENVRFQQGTAESLP------------- 82 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHH----HTCCSEEEEECBTTBCC-------------
T ss_pred CCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHH----cCCCCeEEEecccccCC-------------
Confidence 46799999999999999999985 799999999999999987532 12236999999986654
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+....||+|++.. ++.++. +....++.++++|+ |||+|
T Consensus 83 -------------------------------------~~~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~Lk-pgG~l 120 (239)
T 1xxl_A 83 -------------------------------------FPDDSFDIITCRY-AAHHFS---DVRKAVREVARVLK-QDGRF 120 (239)
T ss_dssp -------------------------------------SCTTCEEEEEEES-CGGGCS---CHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------CCCCcEEEEEECC-chhhcc---CHHHHHHHHHHHcC-CCcEE
Confidence 1246799999875 555654 46788999999999 99999
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
++ |.............. .++. .... .+.+.|+..++.++|++|||
T Consensus 121 ~~~~~~~~~~~~~~~~~~--------~~~~-----------------~~~~---------~~~~~~~~~~~~~ll~~aGf 166 (239)
T 1xxl_A 121 LLVDHYAPEDPVLDEFVN--------HLNR-----------------LRDP---------SHVRESSLSEWQAMFSANQL 166 (239)
T ss_dssp EEEEECBCSSHHHHHHHH--------HHHH-----------------HHCT---------TCCCCCBHHHHHHHHHHTTE
T ss_pred EEEEcCCCCChhHHHHHH--------HHHH-----------------hccc---------cccCCCCHHHHHHHHHHCCC
Confidence 98 655322211100000 0000 0001 12367899999999999999
Q ss_pred cEEEEEe
Q 045407 353 RSVHFWL 359 (382)
Q Consensus 353 ~~V~v~~ 359 (382)
+.+.+..
T Consensus 167 ~~~~~~~ 173 (239)
T 1xxl_A 167 AYQDIQK 173 (239)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 9887753
No 54
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.64 E-value=1.5e-15 Score=135.57 Aligned_cols=140 Identities=17% Similarity=0.186 Sum_probs=102.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++. +|+|+|+.|++.|+++ ++.++++|+.+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~------------- 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENLP------------- 97 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBCC-------------
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccCC-------------
Confidence 457999999999999998765 9999999999999986 3678899986654
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+....||+|++.+ ++.++. +...+++.+++.|+ |||+|
T Consensus 98 -------------------------------------~~~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~L~-pgG~l 135 (219)
T 1vlm_A 98 -------------------------------------LKDESFDFALMVT-TICFVD---DPERALKEAYRILK-KGGYL 135 (219)
T ss_dssp -------------------------------------SCTTCEEEEEEES-CGGGSS---CHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------CCCCCeeEEEEcc-hHhhcc---CHHHHHHHHHHHcC-CCcEE
Confidence 1245799999875 666664 45789999999999 99999
Q ss_pred EEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCc
Q 045407 274 VMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFR 353 (382)
Q Consensus 274 VfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~ 353 (382)
++............. .. . . .+. . +..+.+.|+..+++.+|+++||+
T Consensus 136 ~i~~~~~~~~~~~~~-~~-~-------~--------------------~~~-~----~~~~~~~~~~~~l~~~l~~~Gf~ 181 (219)
T 1vlm_A 136 IVGIVDRESFLGREY-EK-N-------K--------------------EKS-V----FYKNARFFSTEELMDLMRKAGFE 181 (219)
T ss_dssp EEEEECSSSHHHHHH-HH-T-------T--------------------TC--C----CSTTCCCCCHHHHHHHHHHTTCE
T ss_pred EEEEeCCccHHHHHH-HH-H-------h--------------------cCc-c----hhcccccCCHHHHHHHHHHCCCe
Confidence 996654332211110 00 0 0 000 0 00123689999999999999999
Q ss_pred EEEEEe
Q 045407 354 SVHFWL 359 (382)
Q Consensus 354 ~V~v~~ 359 (382)
.+.+.-
T Consensus 182 ~~~~~~ 187 (219)
T 1vlm_A 182 EFKVVQ 187 (219)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998864
No 55
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=1.4e-15 Score=139.48 Aligned_cols=112 Identities=15% Similarity=0.127 Sum_probs=88.2
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
.+.+++..+.. .+.+|||+|||||.++..|++.|. +|+|+|+|+.||+.|+++.. . .++++|+.++
T Consensus 43 ~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~---------~-~~~~~d~~~~ 108 (260)
T 2avn_A 43 LIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV---------K-NVVEAKAEDL 108 (260)
T ss_dssp HHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC---------S-CEEECCTTSC
T ss_pred HHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC---------C-CEEECcHHHC
Confidence 34555555543 356899999999999999999974 79999999999999999852 1 2788898765
Q ss_pred hhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHH
Q 045407 180 LEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYF 259 (382)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yF 259 (382)
+ +...+||+|++.+..+.+..+ ....|
T Consensus 109 ~--------------------------------------------------~~~~~fD~v~~~~~~~~~~~~---~~~~l 135 (260)
T 2avn_A 109 P--------------------------------------------------FPSGAFEAVLALGDVLSYVEN---KDKAF 135 (260)
T ss_dssp C--------------------------------------------------SCTTCEEEEEECSSHHHHCSC---HHHHH
T ss_pred C--------------------------------------------------CCCCCEEEEEEcchhhhcccc---HHHHH
Confidence 5 124679999997655555443 78899
Q ss_pred HHHHhhccCCCcEEEEeccC
Q 045407 260 KHVLHALSKKGGIFVMDLYG 279 (382)
Q Consensus 260 r~V~~~L~~pGGiFVfDl~g 279 (382)
+.++++|+ |||+||+.+.+
T Consensus 136 ~~~~~~Lk-pgG~l~~~~~~ 154 (260)
T 2avn_A 136 SEIRRVLV-PDGLLIATVDN 154 (260)
T ss_dssp HHHHHHEE-EEEEEEEEEEB
T ss_pred HHHHHHcC-CCeEEEEEeCC
Confidence 99999999 99999998765
No 56
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.62 E-value=9.2e-16 Score=144.73 Aligned_cols=148 Identities=13% Similarity=0.025 Sum_probs=106.6
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..++++ + .+|+|||+|++|++.|+++... .+ -..++.++++|+.+++
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~-~~--~~~~v~~~~~d~~~~~------------ 180 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARE-LR--IDDHVRSRVCNMLDTP------------ 180 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHH-TT--CTTTEEEEECCTTSCC------------
T ss_pred CCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHH-cC--CCCceEEEECChhcCC------------
Confidence 468999999999999999998 6 4799999999999999998533 11 1137999999997765
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+....||+|++. .++.|+ + ...+|+.++++|+ |||+
T Consensus 181 --------------------------------------~~~~~fD~V~~~-~~l~~~-~---~~~~l~~~~~~Lk-pgG~ 216 (312)
T 3vc1_A 181 --------------------------------------FDKGAVTASWNN-ESTMYV-D---LHDLFSEHSRFLK-VGGR 216 (312)
T ss_dssp --------------------------------------CCTTCEEEEEEE-SCGGGS-C---HHHHHHHHHHHEE-EEEE
T ss_pred --------------------------------------CCCCCEeEEEEC-CchhhC-C---HHHHHHHHHHHcC-CCcE
Confidence 224679999985 467776 3 8899999999999 9999
Q ss_pred EEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcC
Q 045407 273 FVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAG 351 (382)
Q Consensus 273 FVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAG 351 (382)
||+ +....... ....-+|.. +.+ .+...+++..+++.+|++||
T Consensus 217 l~~~~~~~~~~~----------~~~~~~~~~------------------------~~~--~~~~~~~s~~~~~~~l~~aG 260 (312)
T 3vc1_A 217 YVTITGCWNPRY----------GQPSKWVSQ------------------------INA--HFECNIHSRREYLRAMADNR 260 (312)
T ss_dssp EEEEEEEECTTT----------CSCCHHHHH------------------------HHH--HHTCCCCBHHHHHHHHHTTT
T ss_pred EEEEEccccccc----------cchhHHHHH------------------------HHh--hhcCCCCCHHHHHHHHHHCC
Confidence 998 32211100 000000000 000 01124789999999999999
Q ss_pred CcEEEEE
Q 045407 352 FRSVHFW 358 (382)
Q Consensus 352 F~~V~v~ 358 (382)
|+.+.+.
T Consensus 261 f~~~~~~ 267 (312)
T 3vc1_A 261 LVPHTIV 267 (312)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 9998874
No 57
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=2.5e-15 Score=139.37 Aligned_cols=105 Identities=13% Similarity=0.060 Sum_probs=84.7
Q ss_pred CCCCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..+.+|||+|||+|.++..|++. + .+|+|||+|+.||+.|+++.... + ...++.++++|+.+++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~-~--~~~~~~~~~~d~~~~~---------- 145 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQA-G--LADNITVKYGSFLEIP---------- 145 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHH-T--CTTTEEEEECCTTSCS----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc-C--CCcceEEEEcCcccCC----------
Confidence 33568999999999999999998 5 47999999999999999875321 1 1247999999997765
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
+...+||+|++.. ++.++.+ ...+|+.++++|+ ||
T Consensus 146 ----------------------------------------~~~~~fD~v~~~~-~l~~~~~---~~~~l~~~~~~Lk-pg 180 (297)
T 2o57_A 146 ----------------------------------------CEDNSYDFIWSQD-AFLHSPD---KLKVFQECARVLK-PR 180 (297)
T ss_dssp ----------------------------------------SCTTCEEEEEEES-CGGGCSC---HHHHHHHHHHHEE-EE
T ss_pred ----------------------------------------CCCCCEeEEEecc-hhhhcCC---HHHHHHHHHHHcC-CC
Confidence 2246799999875 6666655 6889999999999 99
Q ss_pred cEEEEe
Q 045407 271 GIFVMD 276 (382)
Q Consensus 271 GiFVfD 276 (382)
|+||+-
T Consensus 181 G~l~~~ 186 (297)
T 2o57_A 181 GVMAIT 186 (297)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999983
No 58
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.61 E-value=7.1e-15 Score=138.44 Aligned_cols=189 Identities=13% Similarity=0.114 Sum_probs=117.7
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc---CCCCcceEEEeccCCCchhhhhcccch
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG---ADGYSRISLFHGNVLQPLEAKLVRYEP 189 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~---~d~~~RI~l~~gDV~~~~~~~~~~~~~ 189 (382)
.+.+|||+|||||.++..|++.+. .+|+|+|+|+.||+.|+++...... .....++.++++|+.++++..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~------ 106 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRI-NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID------ 106 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT------
T ss_pred CCCEEEEECCCCcHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh------
Confidence 356899999999999999998653 5899999999999999997532100 001237999999997765100
Q ss_pred hhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCC--CCCccEEEEccchhccc-CChhHHHHHHHHHHhhc
Q 045407 190 QKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSS--LPARDIICAFNYSCCCL-HKRADLVLYFKHVLHAL 266 (382)
Q Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~fDiV~afn~S~~yL-~~r~dL~~yFr~V~~~L 266 (382)
.+. ..+||+|+|.+ ++.|+ .+.+++...|++++++|
T Consensus 107 ----------------------------------------~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~L 145 (313)
T 3bgv_A 107 ----------------------------------------KFRDPQMCFDICSCQF-VCHYSFESYEQADMMLRNACERL 145 (313)
T ss_dssp ----------------------------------------TCSSTTCCEEEEEEET-CGGGGGGSHHHHHHHHHHHHTTE
T ss_pred ----------------------------------------hcccCCCCEEEEEEec-chhhccCCHHHHHHHHHHHHHHh
Confidence 011 24799999976 66665 77788999999999999
Q ss_pred cCCCcEEEEeccCCCchhhhhHhhh--ccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHH
Q 045407 267 SKKGGIFVMDLYGGTSSEQKLRLQR--RFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIK 344 (382)
Q Consensus 267 ~~pGGiFVfDl~gg~s~e~kl~~~R--~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~ 344 (382)
+ |||+||+.+.+.......+.... .+.+-.|.+.-...+.... .-....|.+. ........+++.+++.
T Consensus 146 k-pgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~f~l~-------~~~~~~~~~~~~~~~~ 216 (313)
T 3bgv_A 146 S-PGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPL-FGCKYDFNLE-------GVVDVPEFLVYFPLLN 216 (313)
T ss_dssp E-EEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCS-SCCEEEEEEC----------CCEEECCCHHHHH
T ss_pred C-CCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCC-ccceEEEEEC-------CcccCcceEEcHHHHH
Confidence 9 99999998776432211111100 0111011110000000000 0001112110 0011224678999999
Q ss_pred HHHHHcCCcEEEEE
Q 045407 345 DCLEEAGFRSVHFW 358 (382)
Q Consensus 345 d~LeeAGF~~V~v~ 358 (382)
++|+++||+.+.+.
T Consensus 217 ~l~~~~G~~~v~~~ 230 (313)
T 3bgv_A 217 EMAKKYNMKLVYKK 230 (313)
T ss_dssp HHGGGGTEEEEEEE
T ss_pred HHHHHcCcEEEEec
Confidence 99999999999864
No 59
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.61 E-value=1.4e-14 Score=133.73 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=82.8
Q ss_pred CCcccccCCCccHhHHHHHH-hCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLR-SDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar-~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++ .| .+|+|||+|++|++.|+++... .+ ...++.++++|+.++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~-~~--~~~~~~~~~~d~~~~------------- 126 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVAN-SE--NLRSKRVLLAGWEQF------------- 126 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHT-CC--CCSCEEEEESCGGGC-------------
T ss_pred cCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHh-cC--CCCCeEEEECChhhC-------------
Confidence 46899999999999999994 45 3899999999999999998532 11 124799999997432
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
.++||+|++.. ++.++.. ++...+|+.+++.|+ |||+
T Consensus 127 ----------------------------------------~~~fD~v~~~~-~l~~~~~-~~~~~~l~~~~~~Lk-pgG~ 163 (287)
T 1kpg_A 127 ----------------------------------------DEPVDRIVSIG-AFEHFGH-ERYDAFFSLAHRLLP-ADGV 163 (287)
T ss_dssp ----------------------------------------CCCCSEEEEES-CGGGTCT-TTHHHHHHHHHHHSC-TTCE
T ss_pred ----------------------------------------CCCeeEEEEeC-chhhcCh-HHHHHHHHHHHHhcC-CCCE
Confidence 15699999876 6676643 577899999999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
+++...
T Consensus 164 l~~~~~ 169 (287)
T 1kpg_A 164 MLLHTI 169 (287)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999544
No 60
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=2.6e-15 Score=146.94 Aligned_cols=117 Identities=17% Similarity=0.198 Sum_probs=87.2
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccc----cCCCCcceEEEeccCCCchhhhhcccc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKV----GADGYSRISLFHGNVLQPLEAKLVRYE 188 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl----~~d~~~RI~l~~gDV~~~~~~~~~~~~ 188 (382)
+.+|||+|||||.++..|++.. +..+|+|+|+|+.||++|+++..... +.....+|.++++|+.++..
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~------- 156 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLAT------- 156 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGG-------
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhh-------
Confidence 4579999999999999999873 56789999999999999998742210 10112479999999987631
Q ss_pred hhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccC
Q 045407 189 PQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSK 268 (382)
Q Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~ 268 (382)
+ ....+....||+|++.+ ++.++. +...+|+.++++|+
T Consensus 157 ---------~----------------------------~~~~~~~~~fD~V~~~~-~l~~~~---d~~~~l~~~~r~Lk- 194 (383)
T 4fsd_A 157 ---------A----------------------------EPEGVPDSSVDIVISNC-VCNLST---NKLALFKEIHRVLR- 194 (383)
T ss_dssp ---------C----------------------------BSCCCCTTCEEEEEEES-CGGGCS---CHHHHHHHHHHHEE-
T ss_pred ---------c----------------------------ccCCCCCCCEEEEEEcc-chhcCC---CHHHHHHHHHHHcC-
Confidence 0 00012346799999875 666665 45789999999999
Q ss_pred CCcEEEE-eccC
Q 045407 269 KGGIFVM-DLYG 279 (382)
Q Consensus 269 pGGiFVf-Dl~g 279 (382)
|||+|++ |++.
T Consensus 195 pgG~l~i~~~~~ 206 (383)
T 4fsd_A 195 DGGELYFSDVYA 206 (383)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCCEEEEEEecc
Confidence 9999999 6553
No 61
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.60 E-value=3.5e-15 Score=130.97 Aligned_cols=156 Identities=13% Similarity=0.101 Sum_probs=108.6
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++. ..++++|+.++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~-----------~~~~~~d~~~~~------------ 86 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEKL-----------DHVVLGDIETMD------------ 86 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTTS-----------SEEEESCTTTCC------------
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC-----------CcEEEcchhhcC------------
Confidence 35689999999999999999995 58999999999999998874 257888987643
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+ .+...+||+|++.. ++.++.+. ...++.+++.|+ |||+
T Consensus 87 -----~-------------------------------~~~~~~fD~v~~~~-~l~~~~~~---~~~l~~~~~~L~-~gG~ 125 (230)
T 3cc8_A 87 -----M-------------------------------PYEEEQFDCVIFGD-VLEHLFDP---WAVIEKVKPYIK-QNGV 125 (230)
T ss_dssp -----C-------------------------------CSCTTCEEEEEEES-CGGGSSCH---HHHHHHTGGGEE-EEEE
T ss_pred -----C-------------------------------CCCCCccCEEEECC-hhhhcCCH---HHHHHHHHHHcC-CCCE
Confidence 0 02246799999864 66666644 588999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
+++.+.+.......... ..+ .|..... + .. ...+.+.|+..+++++|++|||
T Consensus 126 l~~~~~~~~~~~~~~~~---~~~---~~~~~~~-----------------~--~~---~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 126 ILASIPNVSHISVLAPL---LAG---NWTYTEY-----------------G--LL---DKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp EEEEEECTTSHHHHHHH---HTT---CCCCBSS-----------------S--TT---BTTCCCCCCHHHHHHHHHHTTE
T ss_pred EEEEeCCcchHHHHHHH---hcC---CceeccC-----------------C--CC---CcceEEEecHHHHHHHHHHcCC
Confidence 99977543222110000 001 1211000 0 00 0123478999999999999999
Q ss_pred cEEEEEeccC
Q 045407 353 RSVHFWLREM 362 (382)
Q Consensus 353 ~~V~v~~r~~ 362 (382)
+.+++....+
T Consensus 178 ~~~~~~~~~~ 187 (230)
T 3cc8_A 178 SISKVDRVYV 187 (230)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEeccc
Confidence 9998865343
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=1.4e-14 Score=136.13 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=83.7
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++. |. +|+|||+|++|++.|+++... .+ ...++.++++|+.+++
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~-~~--~~~~v~~~~~d~~~~~------------ 153 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLAS-ID--TNRSRQVLLQGWEDFA------------ 153 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHT-SC--CSSCEEEEESCGGGCC------------
T ss_pred cCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh-cC--CCCceEEEECChHHCC------------
Confidence 468999999999999999988 64 799999999999999998532 11 1136899999974322
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
.+||+|++.. ++.|+.. ++...+|+.+++.|+ |||+
T Consensus 154 -----------------------------------------~~fD~v~~~~-~l~~~~~-~~~~~~l~~~~~~Lk-pgG~ 189 (318)
T 2fk8_A 154 -----------------------------------------EPVDRIVSIE-AFEHFGH-ENYDDFFKRCFNIMP-ADGR 189 (318)
T ss_dssp -----------------------------------------CCCSEEEEES-CGGGTCG-GGHHHHHHHHHHHSC-TTCE
T ss_pred -----------------------------------------CCcCEEEEeC-hHHhcCH-HHHHHHHHHHHHhcC-CCcE
Confidence 5699999875 6666643 678999999999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
||+...
T Consensus 190 l~~~~~ 195 (318)
T 2fk8_A 190 MTVQSS 195 (318)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999544
No 63
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.59 E-value=1.4e-15 Score=135.07 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=79.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..|++..+..+|+|||+|++||+.+.+++..++...+..++.++++|+.+++
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~------------- 94 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP------------- 94 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-------------
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-------------
Confidence 4579999999999999999997667999999999999965443333222334458999999998766
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccC--ChhHHHHHHHHHHhhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLH--KRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~--~r~dL~~yFr~V~~~L~~pGG 271 (382)
+ .... |.|.. ..+++.++ -..+...+|+.++++|+ |||
T Consensus 95 ----~---------------------------------~~~~-d~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG 134 (218)
T 3mq2_A 95 ----P---------------------------------LSGV-GELHV-LMPWGSLLRGVLGSSPEMLRGMAAVCR-PGA 134 (218)
T ss_dssp ----S---------------------------------CCCE-EEEEE-ESCCHHHHHHHHTSSSHHHHHHHHTEE-EEE
T ss_pred ----C---------------------------------CCCC-CEEEE-EccchhhhhhhhccHHHHHHHHHHHcC-CCc
Confidence 1 1233 65552 22222211 11223788999999999 999
Q ss_pred EEEEecc
Q 045407 272 IFVMDLY 278 (382)
Q Consensus 272 iFVfDl~ 278 (382)
+|++.+.
T Consensus 135 ~l~~~~~ 141 (218)
T 3mq2_A 135 SFLVALN 141 (218)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999653
No 64
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.58 E-value=3.8e-15 Score=144.57 Aligned_cols=160 Identities=14% Similarity=0.176 Sum_probs=109.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..++++.+..+|+|+|+ ++|++.|+++.... ....||.++.+|+.++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~---~~~~~v~~~~~d~~~~~------------- 242 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL---SGSERIHGHGANLLDRD------------- 242 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC---TTGGGEEEEECCCCSSS-------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc---CcccceEEEEccccccC-------------
Confidence 56899999999999999999988889999999 99999999985321 11248999999997752
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ .+ ...||+|++.+ ++.++ ..++....|++++++|+ |||.+
T Consensus 243 ----~-------------------------------~~-p~~~D~v~~~~-vlh~~-~~~~~~~~l~~~~~~L~-pgG~l 283 (363)
T 3dp7_A 243 ----V-------------------------------PF-PTGFDAVWMSQ-FLDCF-SEEEVISILTRVAQSIG-KDSKV 283 (363)
T ss_dssp ----C-------------------------------CC-CCCCSEEEEES-CSTTS-CHHHHHHHHHHHHHHCC-TTCEE
T ss_pred ----C-------------------------------CC-CCCcCEEEEec-hhhhC-CHHHHHHHHHHHHHhcC-CCcEE
Confidence 0 01 24799999876 33333 45678899999999999 99988
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|+ |...+......... .|.....+. .. ...+ ..|.|+.+|++++|++|||
T Consensus 284 ~i~e~~~~~~~~~~~~~---------~~~~~~~~~---------~~-~~~~----------~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 284 YIMETLWDRQRYETASY---------CLTQISLYF---------TA-MANG----------NSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp EEEECCTTSCSSHHHHH---------HHHHHHHHH---------HH-SSCS----------SCCSCCHHHHHHHHHTTTE
T ss_pred EEEeeccCCccccchhh---------HHHHhhhhH---------Hh-hhCC----------CCcccCHHHHHHHHHHcCC
Confidence 66 65432211100000 000000000 00 0001 1267899999999999999
Q ss_pred cEEEEE
Q 045407 353 RSVHFW 358 (382)
Q Consensus 353 ~~V~v~ 358 (382)
+.+.++
T Consensus 335 ~~v~~~ 340 (363)
T 3dp7_A 335 EVEEIQ 340 (363)
T ss_dssp EESCCC
T ss_pred eEEEEE
Confidence 998886
No 65
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=1.3e-15 Score=140.02 Aligned_cols=102 Identities=10% Similarity=0.069 Sum_probs=80.6
Q ss_pred hCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccc
Q 045407 109 VGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYE 188 (382)
Q Consensus 109 ~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~ 188 (382)
.+...+.+|||+|||||.++..+++.+ .+|+|+|+|+.|++.|+++. ++.++++|+.+++
T Consensus 30 ~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~----------~~~~~~~d~~~~~-------- 89 (261)
T 3ege_A 30 LNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVHP----------QVEWFTGYAENLA-------- 89 (261)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCCT----------TEEEECCCTTSCC--------
T ss_pred hCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhcc----------CCEEEECchhhCC--------
Confidence 333446789999999999999999976 57999999999998776552 7899999997765
Q ss_pred hhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccC
Q 045407 189 PQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSK 268 (382)
Q Consensus 189 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~ 268 (382)
+...+||+|++.+ ++.++ .+...+|++++++|+
T Consensus 90 ------------------------------------------~~~~~fD~v~~~~-~l~~~---~~~~~~l~~~~~~Lk- 122 (261)
T 3ege_A 90 ------------------------------------------LPDKSVDGVISIL-AIHHF---SHLEKSFQEMQRIIR- 122 (261)
T ss_dssp ------------------------------------------SCTTCBSEEEEES-CGGGC---SSHHHHHHHHHHHBC-
T ss_pred ------------------------------------------CCCCCEeEEEEcc-hHhhc---cCHHHHHHHHHHHhC-
Confidence 2246799999986 45555 466789999999996
Q ss_pred CCc-EEEEecc
Q 045407 269 KGG-IFVMDLY 278 (382)
Q Consensus 269 pGG-iFVfDl~ 278 (382)
|| ++|++..
T Consensus 123 -gG~~~~~~~~ 132 (261)
T 3ege_A 123 -DGTIVLLTFD 132 (261)
T ss_dssp -SSCEEEEEEC
T ss_pred -CcEEEEEEcC
Confidence 88 5555653
No 66
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.57 E-value=3.9e-14 Score=134.71 Aligned_cols=149 Identities=17% Similarity=0.157 Sum_probs=108.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|+|+|||||.++..+++..+..+++|+|+ +.|++.|+++.... .-..||.+..+|+.++.
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~---~~~~~v~~~~~d~~~~~------------- 232 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT---GLSGRAQVVVGSFFDPL------------- 232 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT---TCTTTEEEEECCTTSCC-------------
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc---CcCcCeEEecCCCCCCC-------------
Confidence 46899999999999999999988889999999 99999999875321 11258999999986432
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
...||+|++.+ ++.|+. .++....+++++++|+ |||.+
T Consensus 233 ---------------------------------------p~~~D~v~~~~-vlh~~~-~~~~~~~l~~~~~~L~-pgG~l 270 (332)
T 3i53_A 233 ---------------------------------------PAGAGGYVLSA-VLHDWD-DLSAVAILRRCAEAAG-SGGVV 270 (332)
T ss_dssp ---------------------------------------CCSCSEEEEES-CGGGSC-HHHHHHHHHHHHHHHT-TTCEE
T ss_pred ---------------------------------------CCCCcEEEEeh-hhccCC-HHHHHHHHHHHHHhcC-CCCEE
Confidence 22799999987 444444 4568999999999999 99998
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
++ |...... . +. ..+|.. ++ .....+.++..|++++|++|||
T Consensus 271 ~i~e~~~~~~-~---------~~-------~~~d~~-----------------~~---~~~~~~~~t~~e~~~ll~~aGf 313 (332)
T 3i53_A 271 LVIEAVAGDE-H---------AG-------TGMDLR-----------------ML---TYFGGKERSLAELGELAAQAGL 313 (332)
T ss_dssp EEEECCCC-------------CC-------HHHHHH-----------------HH---HHHSCCCCCHHHHHHHHHHTTE
T ss_pred EEEeecCCCC-C---------cc-------HHHHHH-----------------HH---hhCCCCCCCHHHHHHHHHHCCC
Confidence 77 5542211 0 00 011110 00 0011257899999999999999
Q ss_pred cEEEEE
Q 045407 353 RSVHFW 358 (382)
Q Consensus 353 ~~V~v~ 358 (382)
+.++++
T Consensus 314 ~~~~~~ 319 (332)
T 3i53_A 314 AVRAAH 319 (332)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999987
No 67
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.57 E-value=8.6e-15 Score=126.59 Aligned_cols=121 Identities=12% Similarity=0.047 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
.+...++..++ ....+|||+|||||.++..|++++ .+|+|||+|++||+.|+++... .+..++.++++++..
T Consensus 10 ~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~----~~~~~v~~~~~~~~~ 81 (185)
T 3mti_A 10 HMSHDFLAEVL--DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSD----LGIENTELILDGHEN 81 (185)
T ss_dssp HHHHHHHHTTC--CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHH----HTCCCEEEEESCGGG
T ss_pred HHHHHHHHHhC--CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHH----cCCCcEEEEeCcHHH
Confidence 44555555433 223579999999999999999995 5799999999999999998643 122478999977755
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccC--------
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLH-------- 250 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~-------- 250 (382)
+.. +...+||+|++.. .|++
T Consensus 82 l~~-------------------------------------------------~~~~~fD~v~~~~---~~~~~~~~~~~~ 109 (185)
T 3mti_A 82 LDH-------------------------------------------------YVREPIRAAIFNL---GYLPSADKSVIT 109 (185)
T ss_dssp GGG-------------------------------------------------TCCSCEEEEEEEE---C-----------
T ss_pred HHh-------------------------------------------------hccCCcCEEEEeC---CCCCCcchhccc
Confidence 431 1145699996542 4444
Q ss_pred ChhHHHHHHHHHHhhccCCCcEEEEeccCC
Q 045407 251 KRADLVLYFKHVLHALSKKGGIFVMDLYGG 280 (382)
Q Consensus 251 ~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg 280 (382)
...+....++.+++.|+ |||+|++-++.+
T Consensus 110 ~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 138 (185)
T 3mti_A 110 KPHTTLEAIEKILDRLE-VGGRLAIMIYYG 138 (185)
T ss_dssp CHHHHHHHHHHHHHHEE-EEEEEEEEEC--
T ss_pred ChhhHHHHHHHHHHhcC-CCcEEEEEEeCC
Confidence 44677888999999999 999999977754
No 68
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.57 E-value=6.9e-15 Score=134.39 Aligned_cols=176 Identities=10% Similarity=0.006 Sum_probs=107.0
Q ss_pred HHHHHHHhhCCCCCCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHH------HHHHHHHhccccccCCCCcceEEEe
Q 045407 101 LQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLE------ALEWCMENNLNKVGADGYSRISLFH 173 (382)
Q Consensus 101 l~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~e------mL~~A~e~~~~kl~~d~~~RI~l~~ 173 (382)
+..++.. .+-....+|||+|||+|.++..+++. |+..+|+|+|+|+. |++.|+++.... ....+|.+++
T Consensus 32 ~~~l~~~-~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~---~~~~~v~~~~ 107 (275)
T 3bkx_A 32 RLAIAEA-WQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG---PLGDRLTVHF 107 (275)
T ss_dssp HHHHHHH-HTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS---TTGGGEEEEC
T ss_pred HHHHHHH-cCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc---CCCCceEEEE
Confidence 3444443 23333568999999999999999998 56678999999997 999999985321 1114799999
Q ss_pred cc-CCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh
Q 045407 174 GN-VLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR 252 (382)
Q Consensus 174 gD-V~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r 252 (382)
+| ++... + .+...+||+|++.. ++.|+.+.
T Consensus 108 ~d~~~~~~-----------------~-------------------------------~~~~~~fD~v~~~~-~l~~~~~~ 138 (275)
T 3bkx_A 108 NTNLSDDL-----------------G-------------------------------PIADQHFDRVVLAH-SLWYFASA 138 (275)
T ss_dssp SCCTTTCC-----------------G-------------------------------GGTTCCCSEEEEES-CGGGSSCH
T ss_pred CChhhhcc-----------------C-------------------------------CCCCCCEEEEEEcc-chhhCCCH
Confidence 98 43222 0 01246799999765 66777765
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEe-ccCCCchhhhhH-hhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeee
Q 045407 253 ADLVLYFKHVLHALSKKGGIFVMD-LYGGTSSEQKLR-LQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHA 330 (382)
Q Consensus 253 ~dL~~yFr~V~~~L~~pGGiFVfD-l~gg~s~e~kl~-~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~ 330 (382)
.. +..+++.|.||||++++- +........... ..... ....|.. +. ..+
T Consensus 139 ~~----~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~--------------~~~------- 189 (275)
T 3bkx_A 139 NA----LALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAM--IQGLLYA--IA--------------PSD------- 189 (275)
T ss_dssp HH----HHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHH--HHHHHHH--HS--------------CCT-------
T ss_pred HH----HHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHH--HHHHHhh--cc--------------ccc-------
Confidence 43 344445555479999994 332111100000 00000 0000000 00 000
Q ss_pred eeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 331 FSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 331 fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
....++++++.+++.+|++|||+.+++.
T Consensus 190 ~~~~~~~~s~~~l~~~l~~aGf~~~~~~ 217 (275)
T 3bkx_A 190 VANIRTLITPDTLAQIAHDNTWTYTAGT 217 (275)
T ss_dssp TCSCCCCCCHHHHHHHHHHHTCEEEECC
T ss_pred cccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 0123468999999999999999998864
No 69
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.57 E-value=2.8e-14 Score=134.48 Aligned_cols=132 Identities=12% Similarity=0.028 Sum_probs=94.3
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCc---cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEecc
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGT---ALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGN 175 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGT---G~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gD 175 (382)
.|+.+..........+.+|||+|||| |.++..+++..+..+|+|||+|+.||+.|+++.. ...++.++++|
T Consensus 63 ~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~------~~~~v~~~~~D 136 (274)
T 2qe6_A 63 KVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA------KDPNTAVFTAD 136 (274)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT------TCTTEEEEECC
T ss_pred HHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC------CCCCeEEEEee
Confidence 34444443222122246899999999 9988777787777899999999999999999852 12479999999
Q ss_pred CCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH
Q 045407 176 VLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL 255 (382)
Q Consensus 176 V~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL 255 (382)
++++.+. .....+ ...+...+||+|++.+ ++.|+.+. +.
T Consensus 137 ~~~~~~~----------~~~~~~-----------------------------~~~~d~~~~d~v~~~~-vlh~~~d~-~~ 175 (274)
T 2qe6_A 137 VRDPEYI----------LNHPDV-----------------------------RRMIDFSRPAAIMLVG-MLHYLSPD-VV 175 (274)
T ss_dssp TTCHHHH----------HHSHHH-----------------------------HHHCCTTSCCEEEETT-TGGGSCTT-TH
T ss_pred CCCchhh----------hccchh-----------------------------hccCCCCCCEEEEEec-hhhhCCcH-HH
Confidence 9987631 000000 0002235799998764 77777765 78
Q ss_pred HHHHHHHHhhccCCCcEEEEecc
Q 045407 256 VLYFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 256 ~~yFr~V~~~L~~pGGiFVfDl~ 278 (382)
...|++++++|+ |||+|++...
T Consensus 176 ~~~l~~~~~~L~-pGG~l~i~~~ 197 (274)
T 2qe6_A 176 DRVVGAYRDALA-PGSYLFMTSL 197 (274)
T ss_dssp HHHHHHHHHHSC-TTCEEEEEEE
T ss_pred HHHHHHHHHhCC-CCcEEEEEEe
Confidence 999999999999 9999999554
No 70
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.56 E-value=2.9e-14 Score=128.56 Aligned_cols=130 Identities=11% Similarity=0.053 Sum_probs=96.3
Q ss_pred HHHHHhhcCChhhHHHHHHHHHH-hhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC
Q 045407 85 LLYQQSVQSPKGDISYLQKFFLI-YVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA 163 (382)
Q Consensus 85 ~LYd~~vq~p~~Di~yl~~~f~~-y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~ 163 (382)
..|+.....+..-...+...+.. ......+.+|||+|||||.++..+++.+ .+|+|+|+|+.|++.|+++. .
T Consensus 10 ~~y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~-~---- 82 (263)
T 2yqz_A 10 YAYDRLRAHPPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKI-A---- 82 (263)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHT-T----
T ss_pred HHHhhhcccChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHh-h----
Confidence 46777765444444444444421 1122335689999999999999999987 47999999999999999985 1
Q ss_pred CCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc
Q 045407 164 DGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN 243 (382)
Q Consensus 164 d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn 243 (382)
....++.++++|+.+++ +....||+|++.+
T Consensus 83 ~~~~~~~~~~~d~~~~~--------------------------------------------------~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 83 GVDRKVQVVQADARAIP--------------------------------------------------LPDESVHGVIVVH 112 (263)
T ss_dssp TSCTTEEEEESCTTSCC--------------------------------------------------SCTTCEEEEEEES
T ss_pred ccCCceEEEEcccccCC--------------------------------------------------CCCCCeeEEEECC
Confidence 12357999999987654 1246799999865
Q ss_pred chhcccCChhHHHHHHHHHHhhccCCCcEEEEe
Q 045407 244 YSCCCLHKRADLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 244 ~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
++.++. +....++.++++|+ |||++++-
T Consensus 113 -~l~~~~---~~~~~l~~~~~~L~-pgG~l~~~ 140 (263)
T 2yqz_A 113 -LWHLVP---DWPKVLAEAIRVLK-PGGALLEG 140 (263)
T ss_dssp -CGGGCT---THHHHHHHHHHHEE-EEEEEEEE
T ss_pred -chhhcC---CHHHHHHHHHHHCC-CCcEEEEE
Confidence 566655 56789999999999 99999987
No 71
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.56 E-value=1.2e-14 Score=136.96 Aligned_cols=187 Identities=16% Similarity=0.192 Sum_probs=123.5
Q ss_pred CCCchHHHHHHhhcCChhhHHHHHHHHHHhhCC--CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 79 DMPSKFLLYQQSVQSPKGDISYLQKFFLIYVGG--RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 79 ~~p~~~~LYd~~vq~p~~Di~yl~~~f~~y~gg--r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..|.....|...|..... ..+..+...+ .. ..+.+|||+|||||.++..+++..+..+++|+|+| .|++.|+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~ 207 (335)
T 2r3s_A 132 PEHPVWVQFAKAMSPMMA--NPAQLIAQLV-NENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKEN 207 (335)
T ss_dssp TTCTHHHHHHHHSGGGGH--HHHHHHHHHH-TC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh--hhHHHHHHhc-ccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHH
Confidence 345667777776643222 2233444433 22 34578999999999999999999766799999999 999999987
Q ss_pred ccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCc
Q 045407 157 NLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPAR 236 (382)
Q Consensus 157 ~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 236 (382)
.... + -..+|.++++|+.+++ + ...|
T Consensus 208 ~~~~-~--~~~~v~~~~~d~~~~~-----------------~----------------------------------~~~~ 233 (335)
T 2r3s_A 208 ARIQ-G--VASRYHTIAGSAFEVD-----------------Y----------------------------------GNDY 233 (335)
T ss_dssp HHHH-T--CGGGEEEEESCTTTSC-----------------C----------------------------------CSCE
T ss_pred HHhc-C--CCcceEEEecccccCC-----------------C----------------------------------CCCC
Confidence 5321 1 1247999999997654 1 2349
Q ss_pred cEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE-EeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEE
Q 045407 237 DIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV-MDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRIS 315 (382)
Q Consensus 237 DiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV-fDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~ 315 (382)
|+|++.+ ++.++ +.++....+++++++|+ |||.++ +|......... + +....++..
T Consensus 234 D~v~~~~-~l~~~-~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~--------~-----~~~~~~~~~------- 290 (335)
T 2r3s_A 234 DLVLLPN-FLHHF-DVATCEQLLRKIKTALA-VEGKVIVFDFIPNSDRIT--------P-----PDAAAFSLV------- 290 (335)
T ss_dssp EEEEEES-CGGGS-CHHHHHHHHHHHHHHEE-EEEEEEEEECCCCTTSSC--------S-----HHHHHHHHH-------
T ss_pred cEEEEcc-hhccC-CHHHHHHHHHHHHHhCC-CCcEEEEEeecCCCCcCC--------c-----hHHHHHHHH-------
Confidence 9999876 55554 44678999999999999 999555 57653211000 0 000000000
Q ss_pred EEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 316 LHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 316 L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
++ ......+.|+..+++++|++|||+.++++
T Consensus 291 ----------~~--~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 291 ----------ML--ATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp ----------HH--HHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ----------HH--eeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 00 00001267899999999999999999986
No 72
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.56 E-value=9.1e-15 Score=142.19 Aligned_cols=154 Identities=13% Similarity=0.032 Sum_probs=110.5
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|+|+|||||.++..+++..+..+++|+|+ +.|++.|+++... ..-..+|.++++|+.++.
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~---~~l~~~v~~~~~d~~~~~----------- 265 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTG---RGLADRCEILPGDFFETI----------- 265 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH---TTCTTTEEEEECCTTTCC-----------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhh---cCcCCceEEeccCCCCCC-----------
Confidence 3357899999999999999999988889999999 9999999987532 111358999999997432
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
...||+|++.+ .+.|+ +.++.+..+++++++|+ |||
T Consensus 266 -----------------------------------------p~~~D~v~~~~-vlh~~-~d~~~~~~L~~~~~~L~-pgG 301 (369)
T 3gwz_A 266 -----------------------------------------PDGADVYLIKH-VLHDW-DDDDVVRILRRIATAMK-PDS 301 (369)
T ss_dssp -----------------------------------------CSSCSEEEEES-CGGGS-CHHHHHHHHHHHHTTCC-TTC
T ss_pred -----------------------------------------CCCceEEEhhh-hhccC-CHHHHHHHHHHHHHHcC-CCC
Confidence 22699999887 44443 44667899999999999 999
Q ss_pred EEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHc
Q 045407 272 IFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEA 350 (382)
Q Consensus 272 iFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeA 350 (382)
.+++ |......... | ...+|. .+... ..-+.++.+|++.+|++|
T Consensus 302 ~l~i~e~~~~~~~~~--------------~-~~~~d~---------~~~~~-----------~~g~~~t~~e~~~ll~~a 346 (369)
T 3gwz_A 302 RLLVIDNLIDERPAA--------------S-TLFVDL---------LLLVL-----------VGGAERSESEFAALLEKS 346 (369)
T ss_dssp EEEEEEEBCCSSCCH--------------H-HHHHHH---------HHHHH-----------HSCCCBCHHHHHHHHHTT
T ss_pred EEEEEEeccCCCCCC--------------c-hhHhhH---------HHHhh-----------cCCccCCHHHHHHHHHHC
Confidence 8887 5542211100 0 001111 00000 112578999999999999
Q ss_pred CCcEEEEEe
Q 045407 351 GFRSVHFWL 359 (382)
Q Consensus 351 GF~~V~v~~ 359 (382)
||+.++++-
T Consensus 347 Gf~~~~~~~ 355 (369)
T 3gwz_A 347 GLRVERSLP 355 (369)
T ss_dssp TEEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999973
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=7.6e-15 Score=132.70 Aligned_cols=106 Identities=11% Similarity=-0.013 Sum_probs=81.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.++. +|+|||+|+.||+.|+++... ...++.++++|+.++..
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~------------ 122 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPR-----QTHKVIPLKGLWEDVAP------------ 122 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGG-----CSSEEEEEESCHHHHGG------------
T ss_pred CCeEEEEeccCCHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHh-----cCCCeEEEecCHHHhhc------------
Confidence 457999999999999999887763 899999999999999998532 12579999999876520
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEE-ccc-hhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICA-FNY-SCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~a-fn~-S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
.+....||+|++ .+. +...++ ..+...+|++++++|+ |||
T Consensus 123 ------------------------------------~~~~~~fD~V~~d~~~~~~~~~~-~~~~~~~l~~~~r~Lk-pgG 164 (236)
T 1zx0_A 123 ------------------------------------TLPDGHFDGILYDTYPLSEETWH-THQFNFIKNHAFRLLK-PGG 164 (236)
T ss_dssp ------------------------------------GSCTTCEEEEEECCCCCBGGGTT-THHHHHHHHTHHHHEE-EEE
T ss_pred ------------------------------------ccCCCceEEEEECCcccchhhhh-hhhHHHHHHHHHHhcC-CCe
Confidence 022467999999 322 223332 4566788999999999 999
Q ss_pred EEEE
Q 045407 272 IFVM 275 (382)
Q Consensus 272 iFVf 275 (382)
+|++
T Consensus 165 ~l~~ 168 (236)
T 1zx0_A 165 VLTY 168 (236)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 74
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.55 E-value=9.7e-15 Score=136.52 Aligned_cols=197 Identities=10% Similarity=0.091 Sum_probs=116.1
Q ss_pred CCCCchHHHHHHhhcCChhhH---HHHHHHHHHhh---C-CCCCCcccccCCCccHhHH----HHHHhCCCCeE--EEEe
Q 045407 78 TDMPSKFLLYQQSVQSPKGDI---SYLQKFFLIYV---G-GRQPLHLQEDFCGTALLST----EWLRSDSRRTA--VGLD 144 (382)
Q Consensus 78 ~~~p~~~~LYd~~vq~p~~Di---~yl~~~f~~y~---g-gr~p~~LLEl~CGTG~LS~----elar~g~~~tV--vGVD 144 (382)
.|.+.|...|+..+....... .++.+.+.... + ...+.+|||+|||||.++. .++.+++...| +|+|
T Consensus 10 ~d~~~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD 89 (292)
T 2aot_A 10 SDHGKYVESFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVE 89 (292)
T ss_dssp GCHHHHHHHHHHHHTTBSHHHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEEC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEe
Confidence 466778888888886533211 22332222211 1 1234689999999997665 34455555544 9999
Q ss_pred CCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCC
Q 045407 145 LDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGD 224 (382)
Q Consensus 145 LS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (382)
+|++||+.|+++.....+ -...++.+.+++..++.. . . +
T Consensus 90 ~S~~ml~~a~~~~~~~~~-~~~v~~~~~~~~~~~~~~-------------~--~----------------~--------- 128 (292)
T 2aot_A 90 PSAEQIAKYKELVAKTSN-LENVKFAWHKETSSEYQS-------------R--M----------------L--------- 128 (292)
T ss_dssp SCHHHHHHHHHHHHTCSS-CTTEEEEEECSCHHHHHH-------------H--H----------------H---------
T ss_pred CCHHHHHHHHHHHHhccC-CCcceEEEEecchhhhhh-------------h--h----------------c---------
Confidence 999999999998532100 011234444555432210 0 0 0
Q ss_pred CcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecc
Q 045407 225 NCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAE 304 (382)
Q Consensus 225 ~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~ 304 (382)
..+...+||+|+|.+ ++.|+. ++...|++++++|+ |||+|++=..........+. ..+|+.
T Consensus 129 ----~~~~~~~fD~V~~~~-~l~~~~---d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~--------~~~~~~-- 189 (292)
T 2aot_A 129 ----EKKELQKWDFIHMIQ-MLYYVK---DIPATLKFFHSLLG-TNAKMLIIVVSGSSGWDKLW--------KKYGSR-- 189 (292)
T ss_dssp ----TTTCCCCEEEEEEES-CGGGCS---CHHHHHHHHHHTEE-EEEEEEEEEECTTSHHHHHH--------HHHGGG--
T ss_pred ----cccCCCceeEEEEee-eeeecC---CHHHHHHHHHHHcC-CCcEEEEEEecCCccHHHHH--------HHHHHh--
Confidence 002246799999886 666665 46788999999999 99999985433221111100 001111
Q ss_pred cccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 305 FDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 305 fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
+ ..+. +.+.+++.++..+|++|||+.+...
T Consensus 190 ~---------------~~~~---------~~~~~~~~~~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 190 F---------------PQDD---------LCQYITSDDLTQMLDNLGLKYECYD 219 (292)
T ss_dssp S---------------CCCT---------TCCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred c---------------cCCC---------cccCCCHHHHHHHHHHCCCceEEEE
Confidence 0 0000 1256899999999999999988753
No 75
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.55 E-value=1.4e-14 Score=130.48 Aligned_cols=90 Identities=12% Similarity=0.091 Sum_probs=74.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.+. +|+|+|+|+.||+.|+++. .++.++++|+.+...
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~------------ 105 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARANA---------PHADVYEWNGKGELP------------ 105 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCC------------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccC------------
Confidence 45799999999999999999974 7999999999999999983 368999999854320
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCC-CCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSS-LPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+. ..+||+|++. .+....++.+++.|+ |||+
T Consensus 106 -------------------------------------~~~~~~fD~v~~~----------~~~~~~l~~~~~~Lk-pgG~ 137 (226)
T 3m33_A 106 -------------------------------------AGLGAPFGLIVSR----------RGPTSVILRLPELAA-PDAH 137 (226)
T ss_dssp -------------------------------------TTCCCCEEEEEEE----------SCCSGGGGGHHHHEE-EEEE
T ss_pred -------------------------------------CcCCCCEEEEEeC----------CCHHHHHHHHHHHcC-CCcE
Confidence 12 3579999986 245678889999999 9999
Q ss_pred EE
Q 045407 273 FV 274 (382)
Q Consensus 273 FV 274 (382)
|+
T Consensus 138 l~ 139 (226)
T 3m33_A 138 FL 139 (226)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 76
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.54 E-value=2e-14 Score=137.19 Aligned_cols=188 Identities=13% Similarity=0.083 Sum_probs=121.9
Q ss_pred CCchHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccc
Q 045407 80 MPSKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLN 159 (382)
Q Consensus 80 ~p~~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~ 159 (382)
.|.....|...|..... -+..++..+.....+.+|||+|||||.++..+++..+..+++|+|+ +.|++.|+++...
T Consensus 149 ~~~~~~~f~~~m~~~~~---~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~ 224 (352)
T 3mcz_A 149 DTRARDAFNDAMVRLSQ---PMVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHA 224 (352)
T ss_dssp CHHHHHHHHHHHHHHHH---HHHHHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhhh---hHHHHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHh
Confidence 34555566666654111 1223333322112256899999999999999999988889999999 8899999987532
Q ss_pred cccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEE
Q 045407 160 KVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDII 239 (382)
Q Consensus 160 kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV 239 (382)
. ....||.++.+|+.++.. +....||+|
T Consensus 225 -~--~~~~~v~~~~~d~~~~~~-------------------------------------------------~~~~~~D~v 252 (352)
T 3mcz_A 225 -H--DLGGRVEFFEKNLLDARN-------------------------------------------------FEGGAADVV 252 (352)
T ss_dssp -T--TCGGGEEEEECCTTCGGG-------------------------------------------------GTTCCEEEE
T ss_pred -c--CCCCceEEEeCCcccCcc-------------------------------------------------cCCCCccEE
Confidence 1 112489999999977651 013459999
Q ss_pred EEccchhcccCChhHHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEE
Q 045407 240 CAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHF 318 (382)
Q Consensus 240 ~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F 318 (382)
++.+ ++.++ +.++....+++++++|+ |||.+++ |..-...... +.+ ...+|. .+
T Consensus 253 ~~~~-vlh~~-~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~--------~~~-----~~~~~~---------~~ 307 (352)
T 3mcz_A 253 MLND-CLHYF-DAREAREVIGHAAGLVK-PGGALLILTMTMNDDRVT--------PAL-----SADFSL---------HM 307 (352)
T ss_dssp EEES-CGGGS-CHHHHHHHHHHHHHTEE-EEEEEEEEEECCCTTSSS--------SHH-----HHHHHH---------HH
T ss_pred EEec-ccccC-CHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCC--------Cch-----HHHhhH---------HH
Confidence 9976 44444 45678999999999999 9998877 6542111000 000 000110 00
Q ss_pred EeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEE
Q 045407 319 HLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFW 358 (382)
Q Consensus 319 ~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~ 358 (382)
.... ...+.|+..|++++|++|||+.+++.
T Consensus 308 ~~~~----------~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (352)
T 3mcz_A 308 MVNT----------NHGELHPTPWIAGVVRDAGLAVGERS 337 (352)
T ss_dssp HHHS----------TTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HhhC----------CCCCcCCHHHHHHHHHHCCCceeeec
Confidence 0000 01256899999999999999999853
No 77
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.54 E-value=3.4e-14 Score=132.67 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=98.4
Q ss_pred CchHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccc
Q 045407 81 PSKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLN 159 (382)
Q Consensus 81 p~~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~ 159 (382)
......|++.- |.+-..++..+.. +.. ..+.+|||+|||||.++..|++.- +..+|+|+|+|+.||+.|+++...
T Consensus 8 ~~~~~~y~~~r--p~y~~~~~~~l~~-~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~ 83 (299)
T 3g5t_A 8 DFNSERYSSSR--PSYPSDFYKMIDE-YHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEG 83 (299)
T ss_dssp TCCHHHHHHHS--CCCCHHHHHHHHH-HCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHH
T ss_pred ccChHHHhhcC--CCCCHHHHHHHHH-Hhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 34456777753 4444444443333 322 235789999999999999999752 557899999999999999998533
Q ss_pred cccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEE
Q 045407 160 KVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDII 239 (382)
Q Consensus 160 kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV 239 (382)
. .....++.++++|+.+++... ...+...+||+|
T Consensus 84 ~--~~~~~~v~~~~~d~~~~~~~~--------------------------------------------~~~~~~~~fD~V 117 (299)
T 3g5t_A 84 S--PDTYKNVSFKISSSDDFKFLG--------------------------------------------ADSVDKQKIDMI 117 (299)
T ss_dssp C--C-CCTTEEEEECCTTCCGGGC--------------------------------------------TTTTTSSCEEEE
T ss_pred c--cCCCCceEEEEcCHHhCCccc--------------------------------------------cccccCCCeeEE
Confidence 1 011358999999998876200 000113679999
Q ss_pred EEccchhcccCChhHHHHHHHHHHhhccCCCcEEEE
Q 045407 240 CAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 240 ~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVf 275 (382)
+|.+ ++.|+ +...+|+.+++.|+ |||+|++
T Consensus 118 ~~~~-~l~~~----~~~~~l~~~~~~Lk-pgG~l~i 147 (299)
T 3g5t_A 118 TAVE-CAHWF----DFEKFQRSAYANLR-KDGTIAI 147 (299)
T ss_dssp EEES-CGGGS----CHHHHHHHHHHHEE-EEEEEEE
T ss_pred eHhh-HHHHh----CHHHHHHHHHHhcC-CCcEEEE
Confidence 9976 66666 67889999999999 9999988
No 78
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.54 E-value=3.2e-14 Score=123.92 Aligned_cols=121 Identities=13% Similarity=0.052 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
..+..++..++ ..+.+|||+|||+|.++..+++.|+. +|+|+|+|+.|++.|+++... ..++.++++|+.+
T Consensus 30 ~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~ 100 (215)
T 2pxx_A 30 SSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRK 100 (215)
T ss_dssp HHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTS
T ss_pred HHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhc
Confidence 34555555544 23457999999999999999999874 799999999999999998521 2479999999876
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccC--------
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLH-------- 250 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~-------- 250 (382)
++ +....||+|++.. .+.++.
T Consensus 101 ~~--------------------------------------------------~~~~~fD~v~~~~-~~~~~~~~~~~~~~ 129 (215)
T 2pxx_A 101 LD--------------------------------------------------FPSASFDVVLEKG-TLDALLAGERDPWT 129 (215)
T ss_dssp CC--------------------------------------------------SCSSCEEEEEEES-HHHHHTTTCSCTTS
T ss_pred CC--------------------------------------------------CCCCcccEEEECc-chhhhccccccccc
Confidence 54 1245799999854 333322
Q ss_pred ----ChhHHHHHHHHHHhhccCCCcEEEEeccCC
Q 045407 251 ----KRADLVLYFKHVLHALSKKGGIFVMDLYGG 280 (382)
Q Consensus 251 ----~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg 280 (382)
...+...+++.++++|+ |||+||+-.++.
T Consensus 130 ~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~ 162 (215)
T 2pxx_A 130 VSSEGVHTVDQVLSEVSRVLV-PGGRFISMTSAA 162 (215)
T ss_dssp CCHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCC
T ss_pred cccchhHHHHHHHHHHHHhCc-CCCEEEEEeCCC
Confidence 25678999999999999 999999966654
No 79
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.54 E-value=7.7e-15 Score=137.90 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=79.3
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..|++.+. +|+|||+|+.||+.|+++ .+|.++++|+.+++
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~~----------~~v~~~~~~~e~~~-------------- 94 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALRH----------PRVTYAVAPAEDTG-------------- 94 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCCC----------TTEEEEECCTTCCC--------------
T ss_pred CCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhhc----------CCceeehhhhhhhc--------------
Confidence 4799999999999999999985 799999999999866543 37999999987766
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
+....||+|+|.. ++.|+. ..+.|++++++|+ |||+|+
T Consensus 95 ------------------------------------~~~~sfD~v~~~~-~~h~~~----~~~~~~e~~rvLk-pgG~l~ 132 (257)
T 4hg2_A 95 ------------------------------------LPPASVDVAIAAQ-AMHWFD----LDRFWAELRRVAR-PGAVFA 132 (257)
T ss_dssp ------------------------------------CCSSCEEEEEECS-CCTTCC----HHHHHHHHHHHEE-EEEEEE
T ss_pred ------------------------------------ccCCcccEEEEee-ehhHhh----HHHHHHHHHHHcC-CCCEEE
Confidence 2356799999965 665543 4578999999999 999998
Q ss_pred EeccC
Q 045407 275 MDLYG 279 (382)
Q Consensus 275 fDl~g 279 (382)
+=.++
T Consensus 133 ~~~~~ 137 (257)
T 4hg2_A 133 AVTYG 137 (257)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 85443
No 80
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.54 E-value=2.8e-14 Score=123.24 Aligned_cols=105 Identities=10% Similarity=-0.022 Sum_probs=84.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||+|.++..+++.|. +|+|+|+|+.|++.|+++... .+..++.++++|+.+++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~~d~~~~~------------- 93 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSI----ENLDNLHTRVVDLNNLT------------- 93 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----HTCTTEEEEECCGGGCC-------------
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHh----CCCCCcEEEEcchhhCC-------------
Confidence 56899999999999999999974 799999999999999987532 12236899999986654
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ ..+||+|++.. ++.|+. .++...+++.++++|+ |||++
T Consensus 94 -------------------------------------~-~~~~D~v~~~~-~l~~~~-~~~~~~~l~~~~~~L~-~gG~l 132 (199)
T 2xvm_A 94 -------------------------------------F-DRQYDFILSTV-VLMFLE-AKTIPGLIANMQRCTK-PGGYN 132 (199)
T ss_dssp -------------------------------------C-CCCEEEEEEES-CGGGSC-GGGHHHHHHHHHHTEE-EEEEE
T ss_pred -------------------------------------C-CCCceEEEEcc-hhhhCC-HHHHHHHHHHHHHhcC-CCeEE
Confidence 1 46799999875 666654 5688999999999999 99997
Q ss_pred EE-ecc
Q 045407 274 VM-DLY 278 (382)
Q Consensus 274 Vf-Dl~ 278 (382)
++ +..
T Consensus 133 ~~~~~~ 138 (199)
T 2xvm_A 133 LIVAAM 138 (199)
T ss_dssp EEEEEB
T ss_pred EEEEee
Confidence 65 543
No 81
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=5.8e-14 Score=126.49 Aligned_cols=109 Identities=21% Similarity=0.161 Sum_probs=84.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..|++.++ +|+|||+|+.||+.|+++.. ..++.++++|+.++.....
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~--------- 118 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQ--------- 118 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHH---------
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccc---------
Confidence 35799999999999999999997 69999999999999999851 1379999999998762100
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE-
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI- 272 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi- 272 (382)
+. ....||+|++.+ ++.++ ..++...+|+.++++|+ |||+
T Consensus 119 ----~~--------------------------------~~~~~d~v~~~~-~~~~~-~~~~~~~~l~~~~~~Lk-pgG~l 159 (245)
T 3ggd_A 119 ----IH--------------------------------SEIGDANIYMRT-GFHHI-PVEKRELLGQSLRILLG-KQGAM 159 (245)
T ss_dssp ----HH--------------------------------HHHCSCEEEEES-SSTTS-CGGGHHHHHHHHHHHHT-TTCEE
T ss_pred ----cc--------------------------------cccCccEEEEcc-hhhcC-CHHHHHHHHHHHHHHcC-CCCEE
Confidence 00 012489998875 45554 55688999999999999 9997
Q ss_pred EEEeccC
Q 045407 273 FVMDLYG 279 (382)
Q Consensus 273 FVfDl~g 279 (382)
+|+|+..
T Consensus 160 ~i~~~~~ 166 (245)
T 3ggd_A 160 YLIELGT 166 (245)
T ss_dssp EEEEECT
T ss_pred EEEeCCc
Confidence 5557653
No 82
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.52 E-value=5.7e-14 Score=136.45 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=108.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|+|+|||+|.++..++++.|..+++..|+ |++++.|+++... .+..||+++.+|+.+++
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~----~~~~rv~~~~gD~~~~~------------- 241 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF----QEEEQIDFQEGDFFKDP------------- 241 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTTSC-------------
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh----cccCceeeecCccccCC-------------
Confidence 34799999999999999999999999999998 8899999987532 23469999999997654
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
.+.+|+|+..+-.++ .+.++.+..|++++++|+ |||.+
T Consensus 242 ---------------------------------------~~~~D~~~~~~vlh~--~~d~~~~~iL~~~~~al~-pgg~l 279 (353)
T 4a6d_A 242 ---------------------------------------LPEADLYILARVLHD--WADGKCSHLLERIYHTCK-PGGGI 279 (353)
T ss_dssp ---------------------------------------CCCCSEEEEESSGGG--SCHHHHHHHHHHHHHHCC-TTCEE
T ss_pred ---------------------------------------CCCceEEEeeeeccc--CCHHHHHHHHHHHHhhCC-CCCEE
Confidence 356799988764333 345778999999999999 88866
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|+ |..-+..... + |....+|. +....-+. |-+|..|++++|++|||
T Consensus 280 li~e~~~~~~~~~--------~-----~~~~~~dl---------~ml~~~~g-----------~ert~~e~~~ll~~AGf 326 (353)
T 4a6d_A 280 LVIESLLDEDRRG--------P-----LLTQLYSL---------NMLVQTEG-----------QERTPTHYHMLLSSAGF 326 (353)
T ss_dssp EEEECCCCTTSCC--------C-----HHHHHHHH---------HHHHSSSC-----------CCCCHHHHHHHHHHHTC
T ss_pred EEEEeeeCCCCCC--------C-----HHHHHHHH---------HHHHhCCC-----------cCCCHHHHHHHHHHCCC
Confidence 65 7542110000 0 00001121 00000111 45789999999999999
Q ss_pred cEEEEE
Q 045407 353 RSVHFW 358 (382)
Q Consensus 353 ~~V~v~ 358 (382)
+.|+++
T Consensus 327 ~~v~v~ 332 (353)
T 4a6d_A 327 RDFQFK 332 (353)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 999987
No 83
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.52 E-value=7.2e-14 Score=132.46 Aligned_cols=152 Identities=19% Similarity=0.134 Sum_probs=107.1
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..+++..+..+++|+|+ +.|++.|+++.... + -..+|.++++|+.++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~--~~~~v~~~~~d~~~~~-------------- 230 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL-L--AGERVSLVGGDMLQEV-------------- 230 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH-H--HTTSEEEEESCTTTCC--------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc-C--CCCcEEEecCCCCCCC--------------
Confidence 6899999999999999999987789999999 99999999875321 1 0147999999987632
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
...||+|++.+- +.++ ..++....+++++++|+ |||.++
T Consensus 231 --------------------------------------~~~~D~v~~~~v-l~~~-~~~~~~~~l~~~~~~L~-pgG~l~ 269 (334)
T 2ip2_A 231 --------------------------------------PSNGDIYLLSRI-IGDL-DEAASLRLLGNCREAMA-GDGRVV 269 (334)
T ss_dssp --------------------------------------CSSCSEEEEESC-GGGC-CHHHHHHHHHHHHHHSC-TTCEEE
T ss_pred --------------------------------------CCCCCEEEEchh-ccCC-CHHHHHHHHHHHHHhcC-CCCEEE
Confidence 346999998763 3333 45677899999999999 999887
Q ss_pred E-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCc
Q 045407 275 M-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFR 353 (382)
Q Consensus 275 f-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~ 353 (382)
+ |..-..... .|....+|.. .....+ -+.++..|++++|++|||+
T Consensus 270 i~e~~~~~~~~--------------~~~~~~~~~~---------~~~~~~-----------~~~~t~~e~~~ll~~aGf~ 315 (334)
T 2ip2_A 270 VIERTISASEP--------------SPMSVLWDVH---------LFMACA-----------GRHRTTEEVVDLLGRGGFA 315 (334)
T ss_dssp EEECCBCSSSC--------------CHHHHHHHHH---------HHHHHS-----------CCCCBHHHHHHHHHHTTEE
T ss_pred EEEeccCCCCC--------------cchhHHhhhH---------hHhhCC-----------CcCCCHHHHHHHHHHCCCc
Confidence 7 554211100 0000011110 000001 1456899999999999999
Q ss_pred EEEEEe
Q 045407 354 SVHFWL 359 (382)
Q Consensus 354 ~V~v~~ 359 (382)
.++++-
T Consensus 316 ~~~~~~ 321 (334)
T 2ip2_A 316 VERIVD 321 (334)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 999873
No 84
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.52 E-value=7.5e-14 Score=134.03 Aligned_cols=153 Identities=15% Similarity=0.155 Sum_probs=106.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++..+..+++|+|+ +.||+.|+++.... + -..+|.++++|+.++.
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-~--~~~~v~~~~~d~~~~~------------- 245 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA-G--LADRVTVAEGDFFKPL------------- 245 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT-T--CTTTEEEEECCTTSCC-------------
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc-C--CCCceEEEeCCCCCcC-------------
Confidence 56899999999999999999988789999999 99999999875321 1 1137999999987532
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
...||+|++.+ ++.++. ..+....+++++++|+ |||.+
T Consensus 246 ---------------------------------------~~~~D~v~~~~-vl~~~~-~~~~~~~l~~~~~~L~-pgG~l 283 (374)
T 1qzz_A 246 ---------------------------------------PVTADVVLLSF-VLLNWS-DEDALTILRGCVRALE-PGGRL 283 (374)
T ss_dssp ---------------------------------------SCCEEEEEEES-CGGGSC-HHHHHHHHHHHHHHEE-EEEEE
T ss_pred ---------------------------------------CCCCCEEEEec-cccCCC-HHHHHHHHHHHHHhcC-CCcEE
Confidence 23499999876 444443 3566799999999999 99977
Q ss_pred EE-ec--cCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHc
Q 045407 274 VM-DL--YGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEA 350 (382)
Q Consensus 274 Vf-Dl--~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeA 350 (382)
|+ |. ........ .|. ..+|..- ... ...+.|+..+++++|++|
T Consensus 284 ~i~e~~~~~~~~~~~-------------~~~-~~~~~~~---------~~~-----------~~~~~~~~~~~~~ll~~a 329 (374)
T 1qzz_A 284 LVLDRADVEGDGADR-------------FFS-TLLDLRM---------LTF-----------MGGRVRTRDEVVDLAGSA 329 (374)
T ss_dssp EEEECCH-------H-------------HHH-HHHHHHH---------HHH-----------HSCCCCCHHHHHHHHHTT
T ss_pred EEEechhhcCCCCCc-------------chh-hhcchHH---------HHh-----------CCCcCCCHHHHHHHHHHC
Confidence 65 66 31110000 000 0011100 000 012578999999999999
Q ss_pred CCcEEEEEe
Q 045407 351 GFRSVHFWL 359 (382)
Q Consensus 351 GF~~V~v~~ 359 (382)
||+.++++.
T Consensus 330 Gf~~~~~~~ 338 (374)
T 1qzz_A 330 GLALASERT 338 (374)
T ss_dssp TEEEEEEEE
T ss_pred CCceEEEEE
Confidence 999999864
No 85
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.52 E-value=1.7e-14 Score=140.67 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=102.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..++++.+..+++|+|+ +.|++.|+++ .+|.++++|+.++.
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~~------------- 259 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF----------SGVEHLGGDMFDGV------------- 259 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTCC-------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc----------CCCEEEecCCCCCC-------------
Confidence 46899999999999999999999889999999 9999755432 47999999997632
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
... |+|++.+- +.+ ...++....|++++++|+ |||.+
T Consensus 260 ---------------------------------------p~~-D~v~~~~v-lh~-~~~~~~~~~l~~~~~~L~-pgG~l 296 (368)
T 3reo_A 260 ---------------------------------------PKG-DAIFIKWI-CHD-WSDEHCLKLLKNCYAALP-DHGKV 296 (368)
T ss_dssp ---------------------------------------CCC-SEEEEESC-GGG-BCHHHHHHHHHHHHHHSC-TTCEE
T ss_pred ---------------------------------------CCC-CEEEEech-hhc-CCHHHHHHHHHHHHHHcC-CCCEE
Confidence 223 99987763 322 245678899999999999 99977
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
++ |..-...... . ...|....+|. .... ....-+.++.+|++++|++|||
T Consensus 297 ~i~e~~~~~~~~~---------~-~~~~~~~~~d~---------~~~~----------~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 297 IVAEYILPPSPDP---------S-IATKVVIHTDA---------LMLA----------YNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp EEEECCCCSSCCC---------C-HHHHHHHHHHH---------HHHH----------HSSBCCCCCHHHHHHHHHHTTC
T ss_pred EEEEeccCCCCCC---------c-hhhhHHHhhhH---------HHHh----------hcCCCccCCHHHHHHHHHHCCC
Confidence 66 7652211100 0 00000000111 0000 0011256799999999999999
Q ss_pred cEEEEEe
Q 045407 353 RSVHFWL 359 (382)
Q Consensus 353 ~~V~v~~ 359 (382)
+.++++-
T Consensus 348 ~~v~~~~ 354 (368)
T 3reo_A 348 RGFKVAS 354 (368)
T ss_dssp CEEEEEE
T ss_pred eeeEEEE
Confidence 9999863
No 86
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.51 E-value=1.5e-13 Score=131.21 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=86.0
Q ss_pred CCcccccCCCccH----hHHHHHHh-CC---CCeEEEEeCCHHHHHHHHHhcccc-----c-------------cC-CC-
Q 045407 114 PLHLQEDFCGTAL----LSTEWLRS-DS---RRTAVGLDLDLEALEWCMENNLNK-----V-------------GA-DG- 165 (382)
Q Consensus 114 p~~LLEl~CGTG~----LS~elar~-g~---~~tVvGVDLS~emL~~A~e~~~~k-----l-------------~~-d~- 165 (382)
+.+|+|+|||||. +++.|++. +. ..+|+|+|+|+.||+.|+++.... + .. ++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 5789999999998 78878776 31 247999999999999999874210 0 00 11
Q ss_pred -------CcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCC-CCCcc
Q 045407 166 -------YSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSS-LPARD 237 (382)
Q Consensus 166 -------~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~fD 237 (382)
..+|.|.++|+.++++ + .++||
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~--------------------------------------------------~~~~~fD 215 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQY--------------------------------------------------NVPGPFD 215 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSC--------------------------------------------------CCCCCEE
T ss_pred eeechhhcccCeEEecccCCCCC--------------------------------------------------CcCCCee
Confidence 0368999999987541 1 35799
Q ss_pred EEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 238 IICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 238 iV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
+|+|.| ++.||. ++...+.++.++++|+ |||+|++..
T Consensus 216 lI~crn-vliyf~-~~~~~~vl~~~~~~L~-pgG~L~lg~ 252 (274)
T 1af7_A 216 AIFCRN-VMIYFD-KTTQEDILRRFVPLLK-PDGLLFAGH 252 (274)
T ss_dssp EEEECS-SGGGSC-HHHHHHHHHHHGGGEE-EEEEEEECT
T ss_pred EEEECC-chHhCC-HHHHHHHHHHHHHHhC-CCcEEEEEe
Confidence 999987 888985 5778999999999999 999999954
No 87
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.51 E-value=7.7e-14 Score=122.73 Aligned_cols=111 Identities=16% Similarity=0.143 Sum_probs=84.3
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
..+.+.+..+.. .+.+|||+|||||.++..+++.+. .+|+|+|+|+.|++.|+++... .+...+.++++|+.+
T Consensus 48 ~~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~~~d~~~ 120 (205)
T 3grz_A 48 QLAMLGIERAMV--KPLTVADVGTGSGILAIAAHKLGA-KSVLATDISDESMTAAEENAAL----NGIYDIALQKTSLLA 120 (205)
T ss_dssp HHHHHHHHHHCS--SCCEEEEETCTTSHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHH----TTCCCCEEEESSTTT
T ss_pred HHHHHHHHHhcc--CCCEEEEECCCCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHH----cCCCceEEEeccccc
Confidence 344444444332 245799999999999999998865 4899999999999999998532 122238999999865
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHH
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLY 258 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~y 258 (382)
+. ...||+|++.. .+ ..+...
T Consensus 121 ~~----------------------------------------------------~~~fD~i~~~~-~~------~~~~~~ 141 (205)
T 3grz_A 121 DV----------------------------------------------------DGKFDLIVANI-LA------EILLDL 141 (205)
T ss_dssp TC----------------------------------------------------CSCEEEEEEES-CH------HHHHHH
T ss_pred cC----------------------------------------------------CCCceEEEECC-cH------HHHHHH
Confidence 43 46799999853 22 356889
Q ss_pred HHHHHhhccCCCcEEEEe
Q 045407 259 FKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfD 276 (382)
++.+++.|+ |||++++-
T Consensus 142 l~~~~~~L~-~gG~l~~~ 158 (205)
T 3grz_A 142 IPQLDSHLN-EDGQVIFS 158 (205)
T ss_dssp GGGSGGGEE-EEEEEEEE
T ss_pred HHHHHHhcC-CCCEEEEE
Confidence 999999999 99999983
No 88
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.51 E-value=1.4e-13 Score=121.27 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=83.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..|++.++..+|+|+|+|++|++.|+++... . +..++.++++|+.+...
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~---~~~~v~~~~~d~~~~~~------------ 104 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKK-F---VARNVTLVEAFAPEGLD------------ 104 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHH-H---TCTTEEEEECCTTTTCT------------
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-h---CCCcEEEEeCChhhhhh------------
Confidence 4679999999999999999999778999999999999999997532 1 22479999999865430
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
..+.||+|++.... .++..+|+.+++.|+ |||+|
T Consensus 105 --------------------------------------~~~~~D~i~~~~~~-------~~~~~~l~~~~~~Lk-pgG~l 138 (204)
T 3e05_A 105 --------------------------------------DLPDPDRVFIGGSG-------GMLEEIIDAVDRRLK-SEGVI 138 (204)
T ss_dssp --------------------------------------TSCCCSEEEESCCT-------TCHHHHHHHHHHHCC-TTCEE
T ss_pred --------------------------------------cCCCCCEEEECCCC-------cCHHHHHHHHHHhcC-CCeEE
Confidence 13669999876522 167789999999999 99999
Q ss_pred EEecc
Q 045407 274 VMDLY 278 (382)
Q Consensus 274 VfDl~ 278 (382)
++...
T Consensus 139 ~~~~~ 143 (204)
T 3e05_A 139 VLNAV 143 (204)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99754
No 89
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.51 E-value=7.4e-14 Score=130.01 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=84.5
Q ss_pred CCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..+.+|||+|||||.++..+++..+ ..+|+|+|+|+.|++.|+++... ...++.++++|+.+++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~~v~~~~~d~~~~~---------- 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-----LPYDSEFLEGDATEIE---------- 85 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-----SSSEEEEEESCTTTCC----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-----cCCceEEEEcchhhcC----------
Confidence 4467899999999999999999855 26899999999999999998532 1238999999998765
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
+ ..+||+|++.+ ++.++. +...+|++++++|+ ||
T Consensus 86 -------~----------------------------------~~~fD~v~~~~-~l~~~~---~~~~~l~~~~~~Lk-pg 119 (284)
T 3gu3_A 86 -------L----------------------------------NDKYDIAICHA-FLLHMT---TPETMLQKMIHSVK-KG 119 (284)
T ss_dssp -------C----------------------------------SSCEEEEEEES-CGGGCS---SHHHHHHHHHHTEE-EE
T ss_pred -------c----------------------------------CCCeeEEEECC-hhhcCC---CHHHHHHHHHHHcC-CC
Confidence 1 35799999976 556654 44689999999999 99
Q ss_pred cEEEE
Q 045407 271 GIFVM 275 (382)
Q Consensus 271 GiFVf 275 (382)
|+|++
T Consensus 120 G~l~~ 124 (284)
T 3gu3_A 120 GKIIC 124 (284)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99997
No 90
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=3.2e-14 Score=130.33 Aligned_cols=108 Identities=9% Similarity=-0.062 Sum_probs=82.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||+|.++..+++..+ .+|+|||+|++||+.|+++... ...++.++++|..+..
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~-----~~~~~~~~~~~a~~~~------------- 121 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-----QTHKVIPLKGLWEDVA------------- 121 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGG-----CSSEEEEEESCHHHHG-------------
T ss_pred CCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhh-----CCCceEEEeehHHhhc-------------
Confidence 35799999999999999998876 4899999999999999998632 3357889998864432
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc-chhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN-YSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn-~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
. .+...+||.|+.-. .+...+....+...+|++++++|+ |||+
T Consensus 122 ----~-------------------------------~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLk-PGG~ 165 (236)
T 3orh_A 122 ----P-------------------------------TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLK-PGGV 165 (236)
T ss_dssp ----G-------------------------------GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEE
T ss_pred ----c-------------------------------cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeC-CCCE
Confidence 0 12356799986421 122333445688899999999999 9999
Q ss_pred EEEe
Q 045407 273 FVMD 276 (382)
Q Consensus 273 FVfD 276 (382)
|+|.
T Consensus 166 l~f~ 169 (236)
T 3orh_A 166 LTYC 169 (236)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9985
No 91
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.50 E-value=1.3e-13 Score=131.92 Aligned_cols=154 Identities=16% Similarity=0.109 Sum_probs=107.6
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+.+|||+|||||.++..+++.++..+++++|+ +.|++.|+++.... + -..+|.++++|+.++.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-~--~~~~v~~~~~d~~~~~------------ 246 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-G--LSDRVDVVEGDFFEPL------------ 246 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT-T--CTTTEEEEECCTTSCC------------
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc-C--CCCceEEEeCCCCCCC------------
Confidence 356899999999999999999998889999999 99999999875321 1 1137999999986532
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
...||+|++.+ ++.++ ..++....+++++++|+ |||.
T Consensus 247 ----------------------------------------~~~~D~v~~~~-vl~~~-~~~~~~~~l~~~~~~L~-pgG~ 283 (360)
T 1tw3_A 247 ----------------------------------------PRKADAIILSF-VLLNW-PDHDAVRILTRCAEALE-PGGR 283 (360)
T ss_dssp ----------------------------------------SSCEEEEEEES-CGGGS-CHHHHHHHHHHHHHTEE-EEEE
T ss_pred ----------------------------------------CCCccEEEEcc-cccCC-CHHHHHHHHHHHHHhcC-CCcE
Confidence 23499999876 44443 34566899999999999 9997
Q ss_pred EEE-ecc-CCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHc
Q 045407 273 FVM-DLY-GGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEA 350 (382)
Q Consensus 273 FVf-Dl~-gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeA 350 (382)
+|+ |.. -...... .|.. .+|.. .... ...+.++..+++++|++|
T Consensus 284 l~i~e~~~~~~~~~~-------------~~~~-~~~~~---------~~~~-----------~~~~~~t~~e~~~ll~~a 329 (360)
T 1tw3_A 284 ILIHERDDLHENSFN-------------EQFT-ELDLR---------MLVF-----------LGGALRTREKWDGLAASA 329 (360)
T ss_dssp EEEEECCBCGGGCCS-------------HHHH-HHHHH---------HHHH-----------HSCCCCBHHHHHHHHHHT
T ss_pred EEEEEEeccCCCCCc-------------chhh-hccHH---------Hhhh-----------cCCcCCCHHHHHHHHHHC
Confidence 776 654 1110000 0000 01100 0000 012568999999999999
Q ss_pred CCcEEEEEe
Q 045407 351 GFRSVHFWL 359 (382)
Q Consensus 351 GF~~V~v~~ 359 (382)
||+.++++.
T Consensus 330 Gf~~~~~~~ 338 (360)
T 1tw3_A 330 GLVVEEVRQ 338 (360)
T ss_dssp TEEEEEEEE
T ss_pred CCeEEEEEe
Confidence 999999863
No 92
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.50 E-value=1.2e-13 Score=120.62 Aligned_cols=109 Identities=17% Similarity=0.139 Sum_probs=85.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++++. .+|+|||+|++|++.|+++... . +..++.++++|+.++..
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~-~---~~~~v~~~~~d~~~~~~------------ 107 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGA-ASVLFVESDQRSAAVIARNIEA-L---GLSGATLRRGAVAAVVA------------ 107 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-SEEEEEECCHHHHHHHHHHHHH-H---TCSCEEEEESCHHHHHH------------
T ss_pred CCEEEEeCCCcCHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHH-c---CCCceEEEEccHHHHHh------------
Confidence 45799999999999999998875 4899999999999999998533 1 12479999999876541
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHh--hccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLH--ALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~--~L~~pGG 271 (382)
. +...+||+|++-. . |.+..+++...++.+.+ .|+ |||
T Consensus 108 ----~--------------------------------~~~~~fD~i~~~~-p--~~~~~~~~~~~l~~~~~~~~L~-pgG 147 (189)
T 3p9n_A 108 ----A--------------------------------GTTSPVDLVLADP-P--YNVDSADVDAILAALGTNGWTR-EGT 147 (189)
T ss_dssp ----H--------------------------------CCSSCCSEEEECC-C--TTSCHHHHHHHHHHHHHSSSCC-TTC
T ss_pred ----h--------------------------------ccCCCccEEEECC-C--CCcchhhHHHHHHHHHhcCccC-CCe
Confidence 0 1136799998843 2 33445788999999999 999 999
Q ss_pred EEEEeccC
Q 045407 272 IFVMDLYG 279 (382)
Q Consensus 272 iFVfDl~g 279 (382)
+||+....
T Consensus 148 ~l~~~~~~ 155 (189)
T 3p9n_A 148 VAVVERAT 155 (189)
T ss_dssp EEEEEEET
T ss_pred EEEEEecC
Confidence 99997754
No 93
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.50 E-value=7.8e-15 Score=143.59 Aligned_cols=143 Identities=16% Similarity=0.212 Sum_probs=99.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEe-ccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFH-GNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~-gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++.|. +|+|||+|+.|++.|+++... ....++. ++...++
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~~~~-------~~~~~~~~~~~~~l~------------ 166 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREKGIR-------VRTDFFEKATADDVR------------ 166 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTTTCC-------EECSCCSHHHHHHHH------------
T ss_pred CCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHcCCC-------cceeeechhhHhhcc------------
Confidence 45899999999999999999986 799999999999999987321 1111121 1111111
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+ ...+||+|++.+ ++.|+. +...+|+.++++|+ |||+
T Consensus 167 -----~---------------------------------~~~~fD~I~~~~-vl~h~~---d~~~~l~~~~r~Lk-pgG~ 203 (416)
T 4e2x_A 167 -----R---------------------------------TEGPANVIYAAN-TLCHIP---YVQSVLEGVDALLA-PDGV 203 (416)
T ss_dssp -----H---------------------------------HHCCEEEEEEES-CGGGCT---THHHHHHHHHHHEE-EEEE
T ss_pred -----c---------------------------------CCCCEEEEEECC-hHHhcC---CHHHHHHHHHHHcC-CCeE
Confidence 1 136799999986 666664 67889999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
|++....- ..+.... .++. . +..+++.|+..+++.+|+++||
T Consensus 204 l~i~~~~~----~~~~~~~------------~~~~------------------~----~~~~~~~~s~~~l~~ll~~aGf 245 (416)
T 4e2x_A 204 FVFEDPYL----GDIVAKT------------SFDQ------------------I----FDEHFFLFSATSVQGMAQRCGF 245 (416)
T ss_dssp EEEEEECH----HHHHHHT------------CGGG------------------C----STTCCEECCHHHHHHHHHHTTE
T ss_pred EEEEeCCh----HHhhhhc------------chhh------------------h----hhhhhhcCCHHHHHHHHHHcCC
Confidence 99965421 1110000 1110 0 0113467999999999999999
Q ss_pred cEEEEE
Q 045407 353 RSVHFW 358 (382)
Q Consensus 353 ~~V~v~ 358 (382)
+.+.+.
T Consensus 246 ~~~~~~ 251 (416)
T 4e2x_A 246 ELVDVQ 251 (416)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998875
No 94
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.49 E-value=6.8e-14 Score=123.01 Aligned_cols=111 Identities=13% Similarity=0.039 Sum_probs=85.5
Q ss_pred HHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 100 YLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 100 yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
...+++..+.. .+.+|||+|||||.++..+ +. .+|+|+|+|+.|++.|+++. .++.++++|+.++
T Consensus 25 ~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l---~~-~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~ 89 (211)
T 2gs9_A 25 EEERALKGLLP--PGESLLEVGAGTGYWLRRL---PY-PQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL 89 (211)
T ss_dssp HHHHHHHTTCC--CCSEEEEETCTTCHHHHHC---CC-SEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC
T ss_pred HHHHHHHHhcC--CCCeEEEECCCCCHhHHhC---CC-CeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC
Confidence 34444544332 4568999999999998887 43 27999999999999999984 2688999998765
Q ss_pred hhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHH
Q 045407 180 LEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYF 259 (382)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yF 259 (382)
+ +...+||+|++.+ ++.++. +....+
T Consensus 90 ~--------------------------------------------------~~~~~fD~v~~~~-~l~~~~---~~~~~l 115 (211)
T 2gs9_A 90 P--------------------------------------------------FPGESFDVVLLFT-TLEFVE---DVERVL 115 (211)
T ss_dssp C--------------------------------------------------SCSSCEEEEEEES-CTTTCS---CHHHHH
T ss_pred C--------------------------------------------------CCCCcEEEEEEcC-hhhhcC---CHHHHH
Confidence 5 1245799999874 666665 567899
Q ss_pred HHHHhhccCCCcEEEEeccCC
Q 045407 260 KHVLHALSKKGGIFVMDLYGG 280 (382)
Q Consensus 260 r~V~~~L~~pGGiFVfDl~gg 280 (382)
+.+++.|+ |||++|+-..+.
T Consensus 116 ~~~~~~L~-pgG~l~i~~~~~ 135 (211)
T 2gs9_A 116 LEARRVLR-PGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHEE-EEEEEEEEEECT
T ss_pred HHHHHHcC-CCCEEEEEecCC
Confidence 99999999 999999966543
No 95
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.49 E-value=1.9e-13 Score=131.50 Aligned_cols=185 Identities=16% Similarity=0.151 Sum_probs=120.5
Q ss_pred hHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc
Q 045407 83 KFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG 162 (382)
Q Consensus 83 ~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~ 162 (382)
....|...|..... ...+..++..+ .-..+.+|||+|||||.++..++++.+..+++|+|+ +.|++.|+++.... +
T Consensus 162 ~~~~f~~~m~~~~~-~~~~~~l~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~ 237 (359)
T 1x19_A 162 EDNLYFEEIHRSNA-KFAIQLLLEEA-KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK-G 237 (359)
T ss_dssp HHHHHHHHHHHTTC-HHHHHHHHHHC-CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHhcc-chhHHHHHHhc-CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc-C
Confidence 66677776643322 01222333332 223356899999999999999999988789999999 99999999875321 1
Q ss_pred CCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc
Q 045407 163 ADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF 242 (382)
Q Consensus 163 ~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af 242 (382)
-..||.++++|+.+++ .+..|+|++.
T Consensus 238 --~~~~v~~~~~d~~~~~----------------------------------------------------~~~~D~v~~~ 263 (359)
T 1x19_A 238 --VADRMRGIAVDIYKES----------------------------------------------------YPEADAVLFC 263 (359)
T ss_dssp --CTTTEEEEECCTTTSC----------------------------------------------------CCCCSEEEEE
T ss_pred --CCCCEEEEeCccccCC----------------------------------------------------CCCCCEEEEe
Confidence 1237999999997765 2345999987
Q ss_pred cchhcccCChhHHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEee
Q 045407 243 NYSCCCLHKRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQ 321 (382)
Q Consensus 243 n~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~ 321 (382)
+ ++.++ ..++....|++++++|+ |||.+|+ |....... . +.+..+| . .... ..
T Consensus 264 ~-vlh~~-~d~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~-~--------~~~~~~~-~----~~~~---------~~ 317 (359)
T 1x19_A 264 R-ILYSA-NEQLSTIMCKKAFDAMR-SGGRLLILDMVIDDPE-N--------PNFDYLS-H----YILG---------AG 317 (359)
T ss_dssp S-CGGGS-CHHHHHHHHHHHHTTCC-TTCEEEEEEECCCCTT-S--------CCHHHHH-H----HGGG---------GG
T ss_pred c-hhccC-CHHHHHHHHHHHHHhcC-CCCEEEEEecccCCCC-C--------chHHHHH-H----HHHh---------cC
Confidence 5 44443 33568999999999999 9999955 76532210 0 0000000 0 0000 00
Q ss_pred cccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEEe
Q 045407 322 KEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 322 ~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~ 359 (382)
.+. . ..+.++.+|++++|++|||+.++++.
T Consensus 318 ~g~-~-------~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 318 MPF-S-------VLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp SSC-C-------CCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred CCC-c-------ccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 011 0 11458999999999999999999863
No 96
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.49 E-value=4.1e-13 Score=114.53 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=85.0
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCc--ceEEEeccCCCchhhhhcccchh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYS--RISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~--RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
...+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++... .+.. |+.++++|+.++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~----~~~~~~~~~~~~~d~~~~~---------- 115 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKL----NNLDNYDIRVVHSDLYENV---------- 115 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHH----TTCTTSCEEEEECSTTTTC----------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHH----cCCCccceEEEECchhccc----------
Confidence 35689999999999999999995 5899999999999999998532 1122 4999999987643
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
...+||+|++.. .|.+...++...++.+++.|+ ||
T Consensus 116 -----------------------------------------~~~~~D~v~~~~---~~~~~~~~~~~~l~~~~~~L~-~g 150 (194)
T 1dus_A 116 -----------------------------------------KDRKYNKIITNP---PIRAGKEVLHRIIEEGKELLK-DN 150 (194)
T ss_dssp -----------------------------------------TTSCEEEEEECC---CSTTCHHHHHHHHHHHHHHEE-EE
T ss_pred -----------------------------------------ccCCceEEEECC---CcccchhHHHHHHHHHHHHcC-CC
Confidence 135699999843 233346788999999999999 99
Q ss_pred cEEEEeccCC
Q 045407 271 GIFVMDLYGG 280 (382)
Q Consensus 271 GiFVfDl~gg 280 (382)
|++++-....
T Consensus 151 G~l~~~~~~~ 160 (194)
T 1dus_A 151 GEIWVVIQTK 160 (194)
T ss_dssp EEEEEEEEST
T ss_pred CEEEEEECCC
Confidence 9999976653
No 97
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.49 E-value=5.7e-14 Score=137.94 Aligned_cols=137 Identities=12% Similarity=0.060 Sum_probs=95.8
Q ss_pred chHHHHHH--hhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccc
Q 045407 82 SKFLLYQQ--SVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLN 159 (382)
Q Consensus 82 ~~~~LYd~--~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~ 159 (382)
+|-.+|.+ .+++..--..|...++.. .......+|||+|||||.++..+++.|. .+|+|||+| +|++.|+++...
T Consensus 31 ~ya~~~~~~~~l~d~~r~~~~~~~i~~~-~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~ 107 (376)
T 3r0q_C 31 TYSFLYHQKDMLSDRVRMDAYFNAVFQN-KHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKA 107 (376)
T ss_dssp GGGCHHHHHHHHTCHHHHHHHHHHHHTT-TTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHH
T ss_pred HHHHhHHHHHHhcChHHHHHHHHHHHhc-cccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHH
Confidence 34455654 233333333444444332 2233356899999999999999999986 389999999 999999987532
Q ss_pred cccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEE
Q 045407 160 KVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDII 239 (382)
Q Consensus 160 kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV 239 (382)
.+ -..+|.++++|+.++. + ..+||+|
T Consensus 108 -~~--~~~~v~~~~~d~~~~~-----------------~----------------------------------~~~~D~I 133 (376)
T 3r0q_C 108 -NN--LDHIVEVIEGSVEDIS-----------------L----------------------------------PEKVDVI 133 (376)
T ss_dssp -TT--CTTTEEEEESCGGGCC-----------------C----------------------------------SSCEEEE
T ss_pred -cC--CCCeEEEEECchhhcC-----------------c----------------------------------CCcceEE
Confidence 11 1246999999997665 2 2679999
Q ss_pred EEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 240 CAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 240 ~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
++ +....++.....+..+++.+++.|+ |||+||++.
T Consensus 134 v~-~~~~~~l~~e~~~~~~l~~~~~~Lk-pgG~li~~~ 169 (376)
T 3r0q_C 134 IS-EWMGYFLLRESMFDSVISARDRWLK-PTGVMYPSH 169 (376)
T ss_dssp EE-CCCBTTBTTTCTHHHHHHHHHHHEE-EEEEEESSE
T ss_pred EE-cChhhcccchHHHHHHHHHHHhhCC-CCeEEEEec
Confidence 99 3233344445668889999999999 999999853
No 98
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.49 E-value=3.4e-14 Score=138.54 Aligned_cols=149 Identities=15% Similarity=0.044 Sum_probs=102.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..++++.+..+++++|+ ++|++.|++. .+|.++.+|+.++.
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~D~~~~~------------- 257 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF----------PGVTHVGGDMFKEV------------- 257 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTCC-------------
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc----------CCeEEEeCCcCCCC-------------
Confidence 46899999999999999999998889999999 9998755432 48999999997632
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
... |+|++.+-.++ ...++....|++++++|+ |||.+
T Consensus 258 ---------------------------------------p~~-D~v~~~~vlh~--~~d~~~~~~L~~~~~~L~-pgG~l 294 (364)
T 3p9c_A 258 ---------------------------------------PSG-DTILMKWILHD--WSDQHCATLLKNCYDALP-AHGKV 294 (364)
T ss_dssp ---------------------------------------CCC-SEEEEESCGGG--SCHHHHHHHHHHHHHHSC-TTCEE
T ss_pred ---------------------------------------CCC-CEEEehHHhcc--CCHHHHHHHHHHHHHHcC-CCCEE
Confidence 223 99987763222 255788999999999999 99987
Q ss_pred EE-eccCCCchhhhhHhhhccCCeEEEEe-ecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcC
Q 045407 274 VM-DLYGGTSSEQKLRLQRRFANFTYVWE-QAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAG 351 (382)
Q Consensus 274 Vf-Dl~gg~s~e~kl~~~R~~~~~tyvWe-q~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAG 351 (382)
++ |..-...... . ..|. ...+|. .+.. ....-+.++.+|++++|++||
T Consensus 295 ~i~e~~~~~~~~~---------~--~~~~~~~~~d~---------~m~~----------~~~~g~~rt~~e~~~ll~~AG 344 (364)
T 3p9c_A 295 VLVQCILPVNPEA---------N--PSSQGVFHVDM---------IMLA----------HNPGGRERYEREFQALARGAG 344 (364)
T ss_dssp EEEECCBCSSCCS---------S--HHHHHHHHHHH---------HHHH----------HCSSCCCCBHHHHHHHHHHTT
T ss_pred EEEEeccCCCCCc---------c--hhhhhHHHhHH---------HHHh----------cccCCccCCHHHHHHHHHHCC
Confidence 66 6642111000 0 0000 000111 0000 000114578999999999999
Q ss_pred CcEEEEEe
Q 045407 352 FRSVHFWL 359 (382)
Q Consensus 352 F~~V~v~~ 359 (382)
|+.++++-
T Consensus 345 F~~v~~~~ 352 (364)
T 3p9c_A 345 FTGVKSTY 352 (364)
T ss_dssp CCEEEEEE
T ss_pred CceEEEEE
Confidence 99999863
No 99
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.49 E-value=2.7e-14 Score=138.59 Aligned_cols=181 Identities=13% Similarity=0.125 Sum_probs=116.3
Q ss_pred CCCchHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcc
Q 045407 79 DMPSKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNL 158 (382)
Q Consensus 79 ~~p~~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~ 158 (382)
..|.....|...|..... ..+..++..|..-..+.+|||+|||||.++..++++++..+++|+|+ +.|++.|++.
T Consensus 177 ~~~~~~~~f~~~m~~~~~--~~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-- 251 (372)
T 1fp1_D 177 KDKKMNQIFNKSMVDVCA--TEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-- 251 (372)
T ss_dssp SCHHHHHHHHHHHHHHHH--HHHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--
T ss_pred hCHHHHHHHHHHHHhhhH--HHHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc--
Confidence 345555666666532111 12234444432123356899999999999999999998889999999 9999766542
Q ss_pred ccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccE
Q 045407 159 NKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDI 238 (382)
Q Consensus 159 ~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDi 238 (382)
.+|.++++|+.+ + .+.||+
T Consensus 252 --------~~v~~~~~d~~~-~----------------------------------------------------~~~~D~ 270 (372)
T 1fp1_D 252 --------SGIEHVGGDMFA-S----------------------------------------------------VPQGDA 270 (372)
T ss_dssp --------TTEEEEECCTTT-C----------------------------------------------------CCCEEE
T ss_pred --------CCCEEEeCCccc-C----------------------------------------------------CCCCCE
Confidence 369999999976 3 233899
Q ss_pred EEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhhHhhhccCCeEEEE-eecccccccceEEEEE
Q 045407 239 ICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKLRLQRRFANFTYVW-EQAEFDIIERKTRISL 316 (382)
Q Consensus 239 V~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvW-eq~~fD~~~~~~ri~L 316 (382)
|++.+ ++.++. ..+....|++++++|+ |||.||+ |......... . +.| ....+|..
T Consensus 271 v~~~~-~lh~~~-d~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~---------~--~~~~~~~~~d~~-------- 328 (372)
T 1fp1_D 271 MILKA-VCHNWS-DEKCIEFLSNCHKALS-PNGKVIIVEFILPEEPNT---------S--EESKLVSTLDNL-------- 328 (372)
T ss_dssp EEEES-SGGGSC-HHHHHHHHHHHHHHEE-EEEEEEEEEEEECSSCCS---------S--HHHHHHHHHHHH--------
T ss_pred EEEec-ccccCC-HHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCcc---------c--hHHHHHHHhhHH--------
Confidence 99875 454444 4567799999999999 9998887 6542111000 0 000 00001100
Q ss_pred EEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCCcEEEEEe
Q 045407 317 HFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 317 ~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~ 359 (382)
+.... ..+.|+.+|++.+|++|||+.++++.
T Consensus 329 -~~~~~-----------~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 329 -MFITV-----------GGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp -HHHHH-----------SCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred -HHhcc-----------CCccCCHHHHHHHHHHCCCceEEEEE
Confidence 00000 11456999999999999999999873
No 100
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.48 E-value=6.8e-14 Score=129.35 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=84.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||+|.++..+++.|. +|+|+|+|+.||+.|+++... .+ .++.++++|+.++.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~~~d~~~~~------------- 180 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEK----EN-LNISTALYDINAAN------------- 180 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----TT-CCEEEEECCGGGCC-------------
T ss_pred CCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHH----cC-CceEEEEecccccc-------------
Confidence 45799999999999999999985 799999999999999998532 12 37999999987655
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ ..+||+|++.. ++.|+ +.+++..+++.++++|+ |||+|
T Consensus 181 ----~----------------------------------~~~fD~i~~~~-~~~~~-~~~~~~~~l~~~~~~Lk-pgG~l 219 (286)
T 3m70_A 181 ----I----------------------------------QENYDFIVSTV-VFMFL-NRERVPSIIKNMKEHTN-VGGYN 219 (286)
T ss_dssp ----C----------------------------------CSCEEEEEECS-SGGGS-CGGGHHHHHHHHHHTEE-EEEEE
T ss_pred ----c----------------------------------cCCccEEEEcc-chhhC-CHHHHHHHHHHHHHhcC-CCcEE
Confidence 1 46799999976 66665 55788999999999999 99997
Q ss_pred EE
Q 045407 274 VM 275 (382)
Q Consensus 274 Vf 275 (382)
++
T Consensus 220 ~i 221 (286)
T 3m70_A 220 LI 221 (286)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 101
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.48 E-value=2.6e-13 Score=118.37 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=85.9
Q ss_pred CcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
.+|||+|||||.++..+++. ++..+|+|+|+|+.|++.|+++... .+ -..++.++++|+.++..
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~--~~~~v~~~~~d~~~~~~------------ 88 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD-LN--LIDRVTLIKDGHQNMDK------------ 88 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHH-TT--CGGGEEEECSCGGGGGG------------
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cC--CCCCeEEEECCHHHHhh------------
Confidence 57999999999999999998 3445899999999999999998532 11 12479999999876541
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccch-----hcccCChhHHHHHHHHHHhhccC
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYS-----CCCLHKRADLVLYFKHVLHALSK 268 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S-----~~yL~~r~dL~~yFr~V~~~L~~ 268 (382)
+...+||+|++..-. ...+....+...+++.+++.|+
T Consensus 89 -------------------------------------~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk- 130 (197)
T 3eey_A 89 -------------------------------------YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLV- 130 (197)
T ss_dssp -------------------------------------TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEE-
T ss_pred -------------------------------------hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCc-
Confidence 113579999865311 1233455677889999999999
Q ss_pred CCcEEEEeccCC
Q 045407 269 KGGIFVMDLYGG 280 (382)
Q Consensus 269 pGGiFVfDl~gg 280 (382)
|||+|++-.+.+
T Consensus 131 ~gG~l~~~~~~~ 142 (197)
T 3eey_A 131 TGGIITVVIYYG 142 (197)
T ss_dssp EEEEEEEEECCB
T ss_pred CCCEEEEEEccC
Confidence 999999976543
No 102
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.48 E-value=2.5e-13 Score=130.61 Aligned_cols=151 Identities=16% Similarity=0.115 Sum_probs=102.5
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+.+|||+|||||.++..++++.+..+++|+|+ +.++. +++ ....+ ...||.++++|+.++.
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~-~~~~~--~~~~v~~~~~d~~~~~------------ 245 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHR-LDAPD--VAGRWKVVEGDFLREV------------ 245 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCC-CCCGG--GTTSEEEEECCTTTCC------------
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccc-ccccC--CCCCeEEEecCCCCCC------------
Confidence 356899999999999999999998889999999 45555 222 11111 1248999999986322
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+.||+|++.+ ++.++ ..++....|++++++|+ |||.
T Consensus 246 -----------------------------------------p~~D~v~~~~-vlh~~-~d~~~~~~L~~~~~~Lk-pgG~ 281 (348)
T 3lst_A 246 -----------------------------------------PHADVHVLKR-ILHNW-GDEDSVRILTNCRRVMP-AHGR 281 (348)
T ss_dssp -----------------------------------------CCCSEEEEES-CGGGS-CHHHHHHHHHHHHHTCC-TTCE
T ss_pred -----------------------------------------CCCcEEEEeh-hccCC-CHHHHHHHHHHHHHhcC-CCCE
Confidence 3799999886 44443 34567899999999999 9999
Q ss_pred EEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcC
Q 045407 273 FVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAG 351 (382)
Q Consensus 273 FVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAG 351 (382)
||+ |........ +.+ ...+|. ..... ..-+.++..|++++|++||
T Consensus 282 l~i~e~~~~~~~~---------~~~-----~~~~d~---------~~~~~-----------~~~~~~t~~e~~~ll~~aG 327 (348)
T 3lst_A 282 VLVIDAVVPEGND---------AHQ-----SKEMDF---------MMLAA-----------RTGQERTAAELEPLFTAAG 327 (348)
T ss_dssp EEEEECCBCSSSS---------CCH-----HHHHHH---------HHHHT-----------TSCCCCBHHHHHHHHHHTT
T ss_pred EEEEEeccCCCCC---------cch-----hhhcCh---------hhhhc-----------CCCcCCCHHHHHHHHHHCC
Confidence 977 553211100 000 001110 00000 1125688999999999999
Q ss_pred CcEEEEEe
Q 045407 352 FRSVHFWL 359 (382)
Q Consensus 352 F~~V~v~~ 359 (382)
|+.++++-
T Consensus 328 f~~~~~~~ 335 (348)
T 3lst_A 328 LRLDRVVG 335 (348)
T ss_dssp EEEEEEEE
T ss_pred CceEEEEE
Confidence 99999974
No 103
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.47 E-value=1.9e-14 Score=125.11 Aligned_cols=81 Identities=12% Similarity=0.123 Sum_probs=47.8
Q ss_pred ChhhHHHHHHHHHHhhCC-CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE
Q 045407 94 PKGDISYLQKFFLIYVGG-RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF 172 (382)
Q Consensus 94 p~~Di~yl~~~f~~y~gg-r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~ 172 (382)
|..+...+...+...... ..+.+|||+|||||.++..+++.++..+|+|+|+|+.|++.|+++... .+ .++.++
T Consensus 10 p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~----~~-~~~~~~ 84 (215)
T 4dzr_A 10 PRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER----FG-AVVDWA 84 (215)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CC
T ss_pred CCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH----hC-CceEEE
Confidence 455555555555444433 446789999999999999999998767899999999999999987532 12 278889
Q ss_pred eccCCCc
Q 045407 173 HGNVLQP 179 (382)
Q Consensus 173 ~gDV~~~ 179 (382)
++|+.++
T Consensus 85 ~~d~~~~ 91 (215)
T 4dzr_A 85 AADGIEW 91 (215)
T ss_dssp HHHHHHH
T ss_pred EcchHhh
Confidence 9998763
No 104
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.46 E-value=3.4e-13 Score=125.29 Aligned_cols=124 Identities=16% Similarity=0.191 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEecc
Q 045407 96 GDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGN 175 (382)
Q Consensus 96 ~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gD 175 (382)
.+...+...+..... ..+.+|||+|||||.++..+++..+..+|+|+|+|+.||+.|+++... . +..++.++++|
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~-~---~~~~v~~~~~d 167 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQH-L---AIKNIHILQSD 167 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHH-H---TCCSEEEECCS
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-c---CCCceEEEEcc
Confidence 344444444433333 335689999999999999999886667899999999999999998532 1 22369999999
Q ss_pred CCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc------
Q 045407 176 VLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL------ 249 (382)
Q Consensus 176 V~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL------ 249 (382)
+.++. ..++||+|++.. .|...
T Consensus 168 ~~~~~---------------------------------------------------~~~~fD~Iv~np-Py~~~~~~~l~ 195 (276)
T 2b3t_A 168 WFSAL---------------------------------------------------AGQQFAMIVSNP-PYIDEQDPHLQ 195 (276)
T ss_dssp TTGGG---------------------------------------------------TTCCEEEEEECC-CCBCTTCHHHH
T ss_pred hhhhc---------------------------------------------------ccCCccEEEECC-CCCCccccccC
Confidence 86543 135699999842 11111
Q ss_pred -----CC-----------hhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 250 -----HK-----------RADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 250 -----~~-----------r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
+. .+.+...++.+++.|+ |||++++.+
T Consensus 196 ~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk-pgG~l~~~~ 238 (276)
T 2b3t_A 196 QGDVRFEPLTALVAADSGMADIVHIIEQSRNALV-SGGFLLLEH 238 (276)
T ss_dssp SSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE-EEEEEEEEC
T ss_pred hhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 11 1466889999999999 999999853
No 105
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.46 E-value=3.1e-13 Score=120.42 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=83.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++..+..+|+|||+|+.||+.|+++... .+..+|.++++|+.++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~----~~~~~v~~~~~d~~~~~~------------ 105 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLE----VGVPNIKLLWVDGSDLTD------------ 105 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH----HCCSSEEEEECCSSCGGG------------
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHH----cCCCCEEEEeCCHHHHHh------------
Confidence 3469999999999999999998777999999999999999998533 122479999999977541
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh-----HHHHHHHHHHhhccC
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA-----DLVLYFKHVLHALSK 268 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~-----dL~~yFr~V~~~L~~ 268 (382)
. +....||+|++.+ ..-+...+. .....++.++++|+
T Consensus 106 ----~--------------------------------~~~~~~D~i~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~Lk- 147 (214)
T 1yzh_A 106 ----Y--------------------------------FEDGEIDRLYLNF-SDPWPKKRHEKRRLTYKTFLDTFKRILP- 147 (214)
T ss_dssp ----T--------------------------------SCTTCCSEEEEES-CCCCCSGGGGGGSTTSHHHHHHHHHHSC-
T ss_pred ----h--------------------------------cCCCCCCEEEEEC-CCCccccchhhhccCCHHHHHHHHHHcC-
Confidence 0 2245699999764 332322221 24578999999999
Q ss_pred CCcEEEEec
Q 045407 269 KGGIFVMDL 277 (382)
Q Consensus 269 pGGiFVfDl 277 (382)
|||+|++-.
T Consensus 148 pgG~l~~~~ 156 (214)
T 1yzh_A 148 ENGEIHFKT 156 (214)
T ss_dssp TTCEEEEEE
T ss_pred CCcEEEEEe
Confidence 999999954
No 106
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.46 E-value=1e-13 Score=126.41 Aligned_cols=112 Identities=15% Similarity=0.193 Sum_probs=84.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
...|||+|||||.++..+|+..+...|+|||+|++||+.|+++... .+..+|.++++|+.++.. .
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~----~~l~nv~~~~~Da~~~l~-~---------- 99 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE----EGLSNLRVMCHDAVEVLH-K---------- 99 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH----TTCSSEEEECSCHHHHHH-H----------
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH----hCCCcEEEEECCHHHHHH-H----------
Confidence 3468999999999999999999888999999999999999988532 233469999999876420 0
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH-----HHHHHHHHhhccC
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL-----VLYFKHVLHALSK 268 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL-----~~yFr~V~~~L~~ 268 (382)
. +....+|.|++++ +.-|...+... ..+++.+++.|+
T Consensus 100 ----~--------------------------------~~~~~~d~v~~~~-~~p~~~~~~~~rr~~~~~~l~~~~r~Lk- 141 (218)
T 3dxy_A 100 ----M--------------------------------IPDNSLRMVQLFF-PDPWHKARHNKRRIVQVPFAELVKSKLQ- 141 (218)
T ss_dssp ----H--------------------------------SCTTCEEEEEEES-CCCCCSGGGGGGSSCSHHHHHHHHHHEE-
T ss_pred ----H--------------------------------cCCCChheEEEeC-CCCccchhhhhhhhhhHHHHHHHHHHcC-
Confidence 0 1246799998763 44444443322 258999999999
Q ss_pred CCcEEEEecc
Q 045407 269 KGGIFVMDLY 278 (382)
Q Consensus 269 pGGiFVfDl~ 278 (382)
|||+|+|-..
T Consensus 142 pGG~l~i~td 151 (218)
T 3dxy_A 142 LGGVFHMATD 151 (218)
T ss_dssp EEEEEEEEES
T ss_pred CCcEEEEEeC
Confidence 9999999554
No 107
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.45 E-value=5.7e-13 Score=119.48 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=79.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCc-ceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYS-RISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~-RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++.+ .+|+|||+|++|++.|+++... . +.. ++.++++|+.+...
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~-~---g~~~~v~~~~~d~~~~~~----------- 118 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDT-Y---GLSPRMRAVQGTAPAALA----------- 118 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH-T---TCTTTEEEEESCTTGGGT-----------
T ss_pred CCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHH-c---CCCCCEEEEeCchhhhcc-----------
Confidence 4579999999999999999995 5799999999999999998532 1 223 79999999876330
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
..+.||+|++.. ++ +.. +++.+++.|+ |||+
T Consensus 119 ---------------------------------------~~~~~D~v~~~~-~~-------~~~-~l~~~~~~Lk-pgG~ 149 (204)
T 3njr_A 119 ---------------------------------------DLPLPEAVFIGG-GG-------SQA-LYDRLWEWLA-PGTR 149 (204)
T ss_dssp ---------------------------------------TSCCCSEEEECS-CC-------CHH-HHHHHHHHSC-TTCE
T ss_pred ---------------------------------------cCCCCCEEEECC-cc-------cHH-HHHHHHHhcC-CCcE
Confidence 135699999755 22 334 8999999999 9999
Q ss_pred EEEeccC
Q 045407 273 FVMDLYG 279 (382)
Q Consensus 273 FVfDl~g 279 (382)
||+....
T Consensus 150 lv~~~~~ 156 (204)
T 3njr_A 150 IVANAVT 156 (204)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9997754
No 108
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.45 E-value=4.7e-13 Score=113.85 Aligned_cols=103 Identities=24% Similarity=0.265 Sum_probs=79.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCc-ceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYS-RISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~-RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||.++..+++..+..+|+|+|+|+.|++.|+++... .+.. ++ ++++|+.+...
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~----~~~~~~~-~~~~d~~~~~~----------- 89 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAIN----LGVSDRI-AVQQGAPRAFD----------- 89 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT----TTCTTSE-EEECCTTGGGG-----------
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH----hCCCCCE-EEecchHhhhh-----------
Confidence 4589999999999999999996557899999999999999998532 1222 68 88988754320
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
. ..+.||+|++.. ++.+ ..+++.+++.|+ |||+
T Consensus 90 -----~---------------------------------~~~~~D~i~~~~-~~~~-------~~~l~~~~~~L~-~gG~ 122 (178)
T 3hm2_A 90 -----D---------------------------------VPDNPDVIFIGG-GLTA-------PGVFAAAWKRLP-VGGR 122 (178)
T ss_dssp -----G---------------------------------CCSCCSEEEECC--TTC-------TTHHHHHHHTCC-TTCE
T ss_pred -----c---------------------------------cCCCCCEEEECC-cccH-------HHHHHHHHHhcC-CCCE
Confidence 0 026799999765 3322 678899999999 9999
Q ss_pred EEEeccC
Q 045407 273 FVMDLYG 279 (382)
Q Consensus 273 FVfDl~g 279 (382)
+++....
T Consensus 123 l~~~~~~ 129 (178)
T 3hm2_A 123 LVANAVT 129 (178)
T ss_dssp EEEEECS
T ss_pred EEEEeec
Confidence 9996653
No 109
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.45 E-value=2.9e-13 Score=122.56 Aligned_cols=104 Identities=9% Similarity=0.017 Sum_probs=78.0
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..+++.....+|+|||+|+.||+.+.+++.. ..++.++++|+.++..
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~------------- 119 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWK------------- 119 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGG-------------
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchh-------------
Confidence 479999999999999999886556899999999988766554321 1368889999877630
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
. ..+ ...||+|++. +....+...++++++++|+ |||+|+
T Consensus 120 ---~------------------------------~~~-~~~fD~V~~~------~~~~~~~~~~l~~~~r~Lk-pgG~l~ 158 (210)
T 1nt2_A 120 ---Y------------------------------SGI-VEKVDLIYQD------IAQKNQIEILKANAEFFLK-EKGEVV 158 (210)
T ss_dssp ---T------------------------------TTT-CCCEEEEEEC------CCSTTHHHHHHHHHHHHEE-EEEEEE
T ss_pred ---h------------------------------ccc-ccceeEEEEe------ccChhHHHHHHHHHHHHhC-CCCEEE
Confidence 0 001 3579999875 2333555667999999999 999999
Q ss_pred Eecc
Q 045407 275 MDLY 278 (382)
Q Consensus 275 fDl~ 278 (382)
+.+.
T Consensus 159 i~~~ 162 (210)
T 1nt2_A 159 IMVK 162 (210)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9863
No 110
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.44 E-value=4.9e-13 Score=122.07 Aligned_cols=115 Identities=18% Similarity=0.202 Sum_probs=82.0
Q ss_pred CCCCcccccCCCccHhHHHHHHh--CCCCeEEEEeCCHHHHHHHHHhccccc--cCCCCcc-------------------
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRS--DSRRTAVGLDLDLEALEWCMENNLNKV--GADGYSR------------------- 168 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~--g~~~tVvGVDLS~emL~~A~e~~~~kl--~~d~~~R------------------- 168 (382)
..+.+|||+|||||.++..+++. .+..+|+|+|+|+.||+.|+++..... +- ..+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhhhhhcccccchhh
Confidence 34578999999999999999988 444589999999999999998743210 00 002
Q ss_pred ------eE-------------EEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCcc
Q 045407 169 ------IS-------------LFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQ 229 (382)
Q Consensus 169 ------I~-------------l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (382)
|. ++++|+.++..... +
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------------~------------------------------- 163 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSA-------------V------------------------------- 163 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHH-------------H-------------------------------
T ss_pred hhhhhhhhhhccccccccccceeeccccccccccc-------------c-------------------------------
Confidence 56 88899876431000 0
Q ss_pred CCCCCCccEEEEccchhcccCC------hhHHHHHHHHHHhhccCCCcEEEE
Q 045407 230 KSSLPARDIICAFNYSCCCLHK------RADLVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 230 ~~~~~~fDiV~afn~S~~yL~~------r~dL~~yFr~V~~~L~~pGGiFVf 275 (382)
....+||+|+|-. .+.+... .+....+|+.++++|+ |||++++
T Consensus 164 -~~~~~fD~Iv~np-p~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~ 212 (250)
T 1o9g_A 164 -LAGSAPDVVLTDL-PYGERTHWEGQVPGQPVAGLLRSLASALP-AHAVIAV 212 (250)
T ss_dssp -HTTCCCSEEEEEC-CGGGSSSSSSCCCHHHHHHHHHHHHHHSC-TTCEEEE
T ss_pred -cCCCCceEEEeCC-CeeccccccccccccHHHHHHHHHHHhcC-CCcEEEE
Confidence 0023699999853 4444443 4677899999999999 9999998
No 111
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.44 E-value=8.1e-13 Score=114.89 Aligned_cols=113 Identities=16% Similarity=0.128 Sum_probs=82.0
Q ss_pred CChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE
Q 045407 93 SPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF 172 (382)
Q Consensus 93 ~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~ 172 (382)
-|..+...+.+.+... ...+.+|||+|||||.++..+++++ +|+|||+|+.|++. . .++.++
T Consensus 5 ~P~~~~~~l~~~l~~~--~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~----------~~~~~~ 66 (170)
T 3q87_B 5 EPGEDTYTLMDALERE--GLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---H----------RGGNLV 66 (170)
T ss_dssp CCCHHHHHHHHHHHHH--TCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---C----------SSSCEE
T ss_pred CcCccHHHHHHHHHhh--cCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---c----------cCCeEE
Confidence 3666666666665432 1224579999999999999999998 79999999999986 1 368899
Q ss_pred eccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh
Q 045407 173 HGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR 252 (382)
Q Consensus 173 ~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r 252 (382)
++|+.++. ...+||+|++ |..+.+..+.
T Consensus 67 ~~d~~~~~---------------------------------------------------~~~~fD~i~~-n~~~~~~~~~ 94 (170)
T 3q87_B 67 RADLLCSI---------------------------------------------------NQESVDVVVF-NPPYVPDTDD 94 (170)
T ss_dssp ECSTTTTB---------------------------------------------------CGGGCSEEEE-CCCCBTTCCC
T ss_pred ECChhhhc---------------------------------------------------ccCCCCEEEE-CCCCccCCcc
Confidence 99997744 1356999998 4444432222
Q ss_pred ------hHHHHHHHHHHhhccCCCcEEEEec
Q 045407 253 ------ADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 253 ------~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
.+....++.+.+.| |||+|++=.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l--pgG~l~~~~ 123 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV--TVGMLYLLV 123 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC--CSSEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC--CCCEEEEEE
Confidence 23466788888888 799988843
No 112
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.44 E-value=6.3e-14 Score=134.75 Aligned_cols=148 Identities=13% Similarity=0.094 Sum_probs=102.5
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..++++.+..+++|+|+ +.|++.|++. .+|.++++|+.+ +
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~-~------------- 243 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFT-S------------- 243 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTT-C-------------
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccC-C-------------
Confidence 46899999999999999999988789999999 9999866542 259999999865 3
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCC---C
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKK---G 270 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~p---G 270 (382)
.+.||+|++.+ ++.++. ..+....|++++++|+ | |
T Consensus 244 ---------------------------------------~p~~D~v~~~~-~lh~~~-d~~~~~~l~~~~~~L~-p~~~g 281 (352)
T 1fp2_A 244 ---------------------------------------IPNADAVLLKY-ILHNWT-DKDCLRILKKCKEAVT-NDGKR 281 (352)
T ss_dssp ---------------------------------------CCCCSEEEEES-CGGGSC-HHHHHHHHHHHHHHHS-GGGCC
T ss_pred ---------------------------------------CCCccEEEeeh-hhccCC-HHHHHHHHHHHHHhCC-CCCCC
Confidence 23499999876 555544 4567799999999999 8 9
Q ss_pred cEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHH
Q 045407 271 GIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEE 349 (382)
Q Consensus 271 GiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~Lee 349 (382)
|.+|+ |......... +. +.|....+|.. ++. +. -+.++.+|++++|++
T Consensus 282 G~l~i~e~~~~~~~~~--------~~--~~~~~~~~d~~-----------------~~~--~~--g~~~t~~e~~~ll~~ 330 (352)
T 1fp2_A 282 GKVTIIDMVIDKKKDE--------NQ--VTQIKLLMDVN-----------------MAC--LN--GKERNEEEWKKLFIE 330 (352)
T ss_dssp CEEEEEECEECTTTSC--------HH--HHHHHHHHHHH-----------------GGG--GT--CCCEEHHHHHHHHHH
T ss_pred cEEEEEEeecCCCCCc--------cc--hhhhHhhccHH-----------------HHh--cc--CCCCCHHHHHHHHHH
Confidence 98776 6542211100 00 00000011110 000 00 145689999999999
Q ss_pred cCCcEEEEEe
Q 045407 350 AGFRSVHFWL 359 (382)
Q Consensus 350 AGF~~V~v~~ 359 (382)
|||+.++++.
T Consensus 331 aGf~~~~~~~ 340 (352)
T 1fp2_A 331 AGFQHYKISP 340 (352)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCeeEEEe
Confidence 9999999874
No 113
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.43 E-value=1.5e-13 Score=133.57 Aligned_cols=108 Identities=16% Similarity=0.152 Sum_probs=85.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.|. .+|+|||+| +||+.|+++.... + -..+|.++++|+.+++
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~-~~v~gvD~s-~~l~~a~~~~~~~-~--~~~~v~~~~~d~~~~~------------- 128 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGA-RKVIGIECS-SISDYAVKIVKAN-K--LDHVVTIIKGKVEEVE------------- 128 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTC-SEEEEEECS-THHHHHHHHHHHT-T--CTTTEEEEESCTTTCC-------------
T ss_pred CCEEEEEeccchHHHHHHHHCCC-CEEEEECcH-HHHHHHHHHHHHc-C--CCCcEEEEECcHHHcc-------------
Confidence 34799999999999999999975 489999999 5999999875331 1 1236999999998775
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ +..+||+|++..- ..+++....+..+++.+.+.|+ |||+|
T Consensus 129 ----~---------------------------------~~~~fD~Iis~~~-~~~l~~~~~~~~~l~~~~r~Lk-pgG~l 169 (349)
T 3q7e_A 129 ----L---------------------------------PVEKVDIIISEWM-GYCLFYESMLNTVLHARDKWLA-PDGLI 169 (349)
T ss_dssp ----C---------------------------------SSSCEEEEEECCC-BBTBTBTCCHHHHHHHHHHHEE-EEEEE
T ss_pred ----C---------------------------------CCCceEEEEEccc-cccccCchhHHHHHHHHHHhCC-CCCEE
Confidence 2 2467999999542 2335556788899999999999 99999
Q ss_pred EEecc
Q 045407 274 VMDLY 278 (382)
Q Consensus 274 VfDl~ 278 (382)
|++..
T Consensus 170 i~~~~ 174 (349)
T 3q7e_A 170 FPDRA 174 (349)
T ss_dssp ESCEE
T ss_pred ccccc
Confidence 87643
No 114
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.43 E-value=2.1e-13 Score=123.94 Aligned_cols=115 Identities=12% Similarity=0.163 Sum_probs=86.6
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
.++..+.... .+.+|||+|||||.++..+++..+..+|+|||+|++|++.|+++... .+- ..+|.++++|+.+
T Consensus 61 ~~l~~~~~~~----~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 61 DLIKQLIRMN----NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLAT-YHF--ENQVRIIEGNALE 133 (232)
T ss_dssp HHHHHHHHHH----TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHH-TTC--TTTEEEEESCGGG
T ss_pred HHHHHHHhhc----CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEECCHHH
Confidence 4555555432 24579999999999999999966667999999999999999998532 111 1379999999876
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHH
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLY 258 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~y 258 (382)
..... + ..+||+|++.. .......+
T Consensus 134 ~~~~~--------------~----------------------------------~~~fD~V~~~~-------~~~~~~~~ 158 (232)
T 3ntv_A 134 QFENV--------------N----------------------------------DKVYDMIFIDA-------AKAQSKKF 158 (232)
T ss_dssp CHHHH--------------T----------------------------------TSCEEEEEEET-------TSSSHHHH
T ss_pred HHHhh--------------c----------------------------------cCCccEEEEcC-------cHHHHHHH
Confidence 53000 0 35799998543 23457789
Q ss_pred HHHHHhhccCCCcEEEEe
Q 045407 259 FKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfD 276 (382)
|+.+++.|+ |||+||+|
T Consensus 159 l~~~~~~Lk-pgG~lv~d 175 (232)
T 3ntv_A 159 FEIYTPLLK-HQGLVITD 175 (232)
T ss_dssp HHHHGGGEE-EEEEEEEE
T ss_pred HHHHHHhcC-CCeEEEEe
Confidence 999999999 99999996
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.43 E-value=9.5e-14 Score=126.31 Aligned_cols=102 Identities=14% Similarity=0.048 Sum_probs=80.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++..+..+|+|||+|+.|++.|+++... . +..+|.++++|+.++...
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~---~~~~v~~~~~d~~~~~~~----------- 135 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEA-L---QLENTTFCHDRAETFGQR----------- 135 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-H---TCSSEEEEESCHHHHTTC-----------
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-c---CCCCEEEEeccHHHhccc-----------
Confidence 4579999999999999999766667899999999999999987532 1 223699999998654400
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
. ....+||+|+|.. + .++..+++.+++.|+ |||+|
T Consensus 136 ----~--------------------------------~~~~~fD~V~~~~-----~---~~~~~~l~~~~~~Lk-pgG~l 170 (240)
T 1xdz_A 136 ----K--------------------------------DVRESYDIVTARA-----V---ARLSVLSELCLPLVK-KNGLF 170 (240)
T ss_dssp ----T--------------------------------TTTTCEEEEEEEC-----C---SCHHHHHHHHGGGEE-EEEEE
T ss_pred ----c--------------------------------cccCCccEEEEec-----c---CCHHHHHHHHHHhcC-CCCEE
Confidence 0 0035799999865 1 457889999999999 99999
Q ss_pred EE
Q 045407 274 VM 275 (382)
Q Consensus 274 Vf 275 (382)
++
T Consensus 171 ~~ 172 (240)
T 1xdz_A 171 VA 172 (240)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 116
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.43 E-value=3.6e-13 Score=121.33 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=81.9
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..+|+..+...|+|||+|+.||+.|+++... .+..+|.++++|+.++..
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~----~~~~nv~~~~~d~~~l~~------------- 102 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD----SEAQNVKLLNIDADTLTD------------- 102 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH----SCCSSEEEECCCGGGHHH-------------
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH----cCCCCEEEEeCCHHHHHh-------------
Confidence 468999999999999999997778999999999999999998532 123479999999876431
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh-----HHHHHHHHHHhhccCC
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA-----DLVLYFKHVLHALSKK 269 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~-----dL~~yFr~V~~~L~~p 269 (382)
. +....||.|++.+ +.-|...+. ....+++.+++.|+ |
T Consensus 103 ---~--------------------------------~~~~~~d~v~~~~-~~p~~~~~~~~~rl~~~~~l~~~~~~Lk-p 145 (213)
T 2fca_A 103 ---V--------------------------------FEPGEVKRVYLNF-SDPWPKKRHEKRRLTYSHFLKKYEEVMG-K 145 (213)
T ss_dssp ---H--------------------------------CCTTSCCEEEEES-CCCCCSGGGGGGSTTSHHHHHHHHHHHT-T
T ss_pred ---h--------------------------------cCcCCcCEEEEEC-CCCCcCccccccccCcHHHHHHHHHHcC-C
Confidence 0 2245689887643 322322211 13678999999999 9
Q ss_pred CcEEEEec
Q 045407 270 GGIFVMDL 277 (382)
Q Consensus 270 GGiFVfDl 277 (382)
||+|++-.
T Consensus 146 gG~l~~~t 153 (213)
T 2fca_A 146 GGSIHFKT 153 (213)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEe
Confidence 99999955
No 117
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.43 E-value=9.2e-13 Score=133.97 Aligned_cols=124 Identities=10% Similarity=0.105 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcc------ccccCCCCcceEEE
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNL------NKVGADGYSRISLF 172 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~------~kl~~d~~~RI~l~ 172 (382)
..+.+++.. ++-....+|||+|||||.++..+|+......|+|||+|++|+++|+++.. ...+- ...+|.|+
T Consensus 160 ~~i~~il~~-l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl-~~~rVefi 237 (438)
T 3uwp_A 160 DLVAQMIDE-IKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK-KHAEYTLE 237 (438)
T ss_dssp HHHHHHHHH-HCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB-CCCEEEEE
T ss_pred HHHHHHHHh-cCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC-CCCCeEEE
Confidence 345666654 33333467999999999999999976443469999999999999998531 11111 12489999
Q ss_pred eccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh
Q 045407 173 HGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR 252 (382)
Q Consensus 173 ~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r 252 (382)
+||+.++++... ...+|+|++-++ + | .
T Consensus 238 ~GD~~~lp~~d~------------------------------------------------~~~aDVVf~Nn~-~--F--~ 264 (438)
T 3uwp_A 238 RGDFLSEEWRER------------------------------------------------IANTSVIFVNNF-A--F--G 264 (438)
T ss_dssp ECCTTSHHHHHH------------------------------------------------HHTCSEEEECCT-T--C--C
T ss_pred ECcccCCccccc------------------------------------------------cCCccEEEEccc-c--c--C
Confidence 999998873100 246899997543 2 2 2
Q ss_pred hHHHHHHHHHHhhccCCCcEEEE-ecc
Q 045407 253 ADLVLYFKHVLHALSKKGGIFVM-DLY 278 (382)
Q Consensus 253 ~dL~~yFr~V~~~L~~pGGiFVf-Dl~ 278 (382)
.++...|+.+++.|+ |||+||+ +.+
T Consensus 265 pdl~~aL~Ei~RvLK-PGGrIVssE~f 290 (438)
T 3uwp_A 265 PEVDHQLKERFANMK-EGGRIVSSKPF 290 (438)
T ss_dssp HHHHHHHHHHHTTSC-TTCEEEESSCS
T ss_pred chHHHHHHHHHHcCC-CCcEEEEeecc
Confidence 688999999999999 9999998 554
No 118
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.42 E-value=8.5e-13 Score=117.49 Aligned_cols=107 Identities=17% Similarity=0.132 Sum_probs=80.8
Q ss_pred CCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||.++..+++.-+ ..+|+|+|+|++|++.|+++... .+- ..+|.++++|+.+... .
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~v~~~~~d~~~~~~-~--------- 125 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIER-ANL--NDRVEVRTGLALDSLQ-Q--------- 125 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHH-TTC--TTTEEEEESCHHHHHH-H---------
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEEcCHHHHHH-H---------
Confidence 45799999999999999999844 46899999999999999987532 111 2379999999865431 0
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+. . ....+||+|++-.. ......+|+.+++.|+ |||+
T Consensus 126 -----~~----------------~--------------~~~~~fD~v~~d~~-------~~~~~~~l~~~~~~L~-pgG~ 162 (223)
T 3duw_A 126 -----IE----------------N--------------EKYEPFDFIFIDAD-------KQNNPAYFEWALKLSR-PGTV 162 (223)
T ss_dssp -----HH----------------H--------------TTCCCCSEEEECSC-------GGGHHHHHHHHHHTCC-TTCE
T ss_pred -----HH----------------h--------------cCCCCcCEEEEcCC-------cHHHHHHHHHHHHhcC-CCcE
Confidence 00 0 00256999986532 3466789999999999 9999
Q ss_pred EEEe
Q 045407 273 FVMD 276 (382)
Q Consensus 273 FVfD 276 (382)
+|+|
T Consensus 163 lv~~ 166 (223)
T 3duw_A 163 IIGD 166 (223)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9997
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.42 E-value=7e-13 Score=128.52 Aligned_cols=135 Identities=18% Similarity=0.113 Sum_probs=94.2
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC
Q 045407 84 FLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA 163 (382)
Q Consensus 84 ~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~ 163 (382)
+..+....++..-...|...+... .....+.+|||+|||||.++..+++.|. .+|+|||+|+ |++.|+++... .+
T Consensus 36 ~~~~~~ml~d~~r~~~~~~~i~~~-~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~v~gvD~s~-~~~~a~~~~~~-~~- 110 (340)
T 2fyt_A 36 YGIHEEMLKDKIRTESYRDFIYQN-PHIFKDKVVLDVGCGTGILSMFAAKAGA-KKVLGVDQSE-ILYQAMDIIRL-NK- 110 (340)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHC-GGGTTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEESST-HHHHHHHHHHH-TT-
T ss_pred hhHHHHHhcCHHHHHHHHHHHHhh-hhhcCCCEEEEeeccCcHHHHHHHHcCC-CEEEEEChHH-HHHHHHHHHHH-cC-
Confidence 334444444444334444444432 2223346799999999999999999975 4899999996 99999987532 11
Q ss_pred CCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc
Q 045407 164 DGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN 243 (382)
Q Consensus 164 d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn 243 (382)
-..+|.++++|+.++. + ...+||+|++..
T Consensus 111 -~~~~i~~~~~d~~~~~-----------------~---------------------------------~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 111 -LEDTITLIKGKIEEVH-----------------L---------------------------------PVEKVDVIISEW 139 (340)
T ss_dssp -CTTTEEEEESCTTTSC-----------------C---------------------------------SCSCEEEEEECC
T ss_pred -CCCcEEEEEeeHHHhc-----------------C---------------------------------CCCcEEEEEEcC
Confidence 1147999999998765 2 235799999854
Q ss_pred chhcccCChhHHHHHHHHHHhhccCCCcEEEEe
Q 045407 244 YSCCCLHKRADLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 244 ~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
-. .++....++..+++.+++.|+ |||+||.+
T Consensus 140 ~~-~~l~~~~~~~~~l~~~~~~Lk-pgG~lip~ 170 (340)
T 2fyt_A 140 MG-YFLLFESMLDSVLYAKNKYLA-KGGSVYPD 170 (340)
T ss_dssp CB-TTBTTTCHHHHHHHHHHHHEE-EEEEEESC
T ss_pred ch-hhccCHHHHHHHHHHHHhhcC-CCcEEEcc
Confidence 22 224455678889999999999 99999843
No 120
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.41 E-value=8.3e-13 Score=128.44 Aligned_cols=104 Identities=10% Similarity=0.003 Sum_probs=81.8
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|||+|||||.++..++.+-+..+|+|||+|++||+.|+++... . +..+|.++++|+.+++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~-~---gl~~v~~v~gDa~~l~----------- 185 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG-L---GVDGVNVITGDETVID----------- 185 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH-H---TCCSEEEEESCGGGGG-----------
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh-c---CCCCeEEEECchhhCC-----------
Confidence 446789999999998776655554457899999999999999998532 1 2258999999986654
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
..+||+|++... .++...+|++++++|+ |||
T Consensus 186 -----------------------------------------d~~FDvV~~~a~-------~~d~~~~l~el~r~Lk-PGG 216 (298)
T 3fpf_A 186 -----------------------------------------GLEFDVLMVAAL-------AEPKRRVFRNIHRYVD-TET 216 (298)
T ss_dssp -----------------------------------------GCCCSEEEECTT-------CSCHHHHHHHHHHHCC-TTC
T ss_pred -----------------------------------------CCCcCEEEECCC-------ccCHHHHHHHHHHHcC-CCc
Confidence 367999987432 2577899999999999 999
Q ss_pred EEEEeccC
Q 045407 272 IFVMDLYG 279 (382)
Q Consensus 272 iFVfDl~g 279 (382)
+||+....
T Consensus 217 ~Lvv~~~~ 224 (298)
T 3fpf_A 217 RIIYRTYT 224 (298)
T ss_dssp EEEEEECC
T ss_pred EEEEEcCc
Confidence 99997654
No 121
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.41 E-value=3.7e-13 Score=128.64 Aligned_cols=114 Identities=18% Similarity=0.114 Sum_probs=80.7
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..|.+|||+|||+|.++.++++..+..+|+|||+|+.|+++|+++...-.......++.++++|+.++..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~---------- 163 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR---------- 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH----------
Confidence 3467899999999999999998865568999999999999999975210000112589999999866541
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccCC
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSKK 269 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~p 269 (382)
. ....+||+|++-... .......| ..+|+.++++|+ |
T Consensus 164 ------~--------------------------------~~~~~fDvIi~d~~~--~~~~~~~l~~~~~l~~~~~~Lk-p 202 (304)
T 3bwc_A 164 ------Q--------------------------------TPDNTYDVVIIDTTD--PAGPASKLFGEAFYKDVLRILK-P 202 (304)
T ss_dssp ------S--------------------------------SCTTCEEEEEEECC-----------CCHHHHHHHHHHEE-E
T ss_pred ------h--------------------------------ccCCceeEEEECCCC--ccccchhhhHHHHHHHHHHhcC-C
Confidence 0 013579999984322 22222333 688999999999 9
Q ss_pred CcEEEEe
Q 045407 270 GGIFVMD 276 (382)
Q Consensus 270 GGiFVfD 276 (382)
||+|++-
T Consensus 203 gG~lv~~ 209 (304)
T 3bwc_A 203 DGICCNQ 209 (304)
T ss_dssp EEEEEEE
T ss_pred CcEEEEe
Confidence 9999985
No 122
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.41 E-value=7.3e-14 Score=129.24 Aligned_cols=43 Identities=14% Similarity=0.205 Sum_probs=38.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENN 157 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~ 157 (382)
..+|||+|||||.++..+++.|. .+|+|||+|+.||++|+++.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTC
T ss_pred CCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhC
Confidence 35799999999999999999985 38999999999999998874
No 123
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.41 E-value=3e-12 Score=114.76 Aligned_cols=125 Identities=11% Similarity=0.118 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEec
Q 045407 96 GDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174 (382)
Q Consensus 96 ~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~g 174 (382)
....++..+.... .+.+|||+|||||.++..|++.- +..+|+|||+|++|++.|+++... .+- ..+|.++++
T Consensus 45 ~~~~~l~~l~~~~----~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~v~~~~~ 117 (221)
T 3u81_A 45 AKGQIMDAVIREY----SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNF-AGL--QDKVTILNG 117 (221)
T ss_dssp HHHHHHHHHHHHH----CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTC--GGGEEEEES
T ss_pred HHHHHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH-cCC--CCceEEEEC
Confidence 3345555544432 25679999999999999999852 246899999999999999997532 111 237999999
Q ss_pred cCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhH
Q 045407 175 NVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD 254 (382)
Q Consensus 175 DV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~d 254 (382)
|+.+... . +. ..+...+||+|++-.....| ..
T Consensus 118 d~~~~l~-------------~--~~-----------------------------~~~~~~~fD~V~~d~~~~~~----~~ 149 (221)
T 3u81_A 118 ASQDLIP-------------Q--LK-----------------------------KKYDVDTLDMVFLDHWKDRY----LP 149 (221)
T ss_dssp CHHHHGG-------------G--TT-----------------------------TTSCCCCCSEEEECSCGGGH----HH
T ss_pred CHHHHHH-------------H--HH-----------------------------HhcCCCceEEEEEcCCcccc----hH
Confidence 9755320 0 00 00113679999876544443 45
Q ss_pred HHHHHHHHHhhccCCCcEEEEec
Q 045407 255 LVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 255 L~~yFr~V~~~L~~pGGiFVfDl 277 (382)
...+++.+ +.|+ |||+||+|-
T Consensus 150 ~~~~~~~~-~~Lk-pgG~lv~~~ 170 (221)
T 3u81_A 150 DTLLLEKC-GLLR-KGTVLLADN 170 (221)
T ss_dssp HHHHHHHT-TCCC-TTCEEEESC
T ss_pred HHHHHHhc-cccC-CCeEEEEeC
Confidence 55677777 9998 999999964
No 124
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.41 E-value=9.8e-14 Score=127.10 Aligned_cols=63 Identities=10% Similarity=-0.007 Sum_probs=50.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCC-HHHHHHH---HHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLD-LEALEWC---MENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS-~emL~~A---~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+.+|||+|||||.++..++++.+..+|+|||+| +.||+.| +++.. ..+..+|.++++|+.+++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~----~~~~~~v~~~~~d~~~l~ 91 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPS----KGGLSNVVFVIAAAESLP 91 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGG----GTCCSSEEEECCBTTBCC
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHH----HcCCCCeEEEEcCHHHhh
Confidence 457999999999999999987777789999999 7777776 65532 223347999999987665
No 125
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.40 E-value=1.6e-12 Score=123.46 Aligned_cols=106 Identities=9% Similarity=-0.028 Sum_probs=78.5
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..|+++|. +|+|||+|+.||+.|+++... . ++++++.+.+..
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~-----~-----~v~~~~~~~~~~----------- 102 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALAD-----R-----CVTIDLLDITAE----------- 102 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSS-----S-----CCEEEECCTTSC-----------
T ss_pred cCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHh-----c-----cceeeeeecccc-----------
Confidence 45899999999999999999985 799999999999999998532 1 234444333300
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+. .+ ..++||+|+|.. ++.++. ++++..+++.++++| |||++
T Consensus 103 ----~~-----------------------------~~-~~~~fD~Vv~~~-~l~~~~-~~~~~~~l~~l~~lL--PGG~l 144 (261)
T 3iv6_A 103 ----IP-----------------------------KE-LAGHFDFVLNDR-LINRFT-TEEARRACLGMLSLV--GSGTV 144 (261)
T ss_dssp ----CC-----------------------------GG-GTTCCSEEEEES-CGGGSC-HHHHHHHHHHHHHHH--TTSEE
T ss_pred ----cc-----------------------------cc-cCCCccEEEEhh-hhHhCC-HHHHHHHHHHHHHhC--cCcEE
Confidence 00 00 035799999864 666654 568899999999998 79999
Q ss_pred EEeccCC
Q 045407 274 VMDLYGG 280 (382)
Q Consensus 274 VfDl~gg 280 (382)
++-+..|
T Consensus 145 ~lS~~~g 151 (261)
T 3iv6_A 145 RASVKLG 151 (261)
T ss_dssp EEEEEBS
T ss_pred EEEeccC
Confidence 9976543
No 126
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.40 E-value=7.2e-13 Score=127.47 Aligned_cols=134 Identities=20% Similarity=0.209 Sum_probs=94.1
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCC
Q 045407 85 LLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGAD 164 (382)
Q Consensus 85 ~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d 164 (382)
..+....+++.--..|...+... ..-..+.+|||+|||||.++..+++.|. .+|+|||+| +|++.|+++.... +
T Consensus 11 ~~~~~ml~d~~r~~~y~~ai~~~-~~~~~~~~VLDiGcGtG~ls~~la~~g~-~~v~~vD~s-~~~~~a~~~~~~~-~-- 84 (328)
T 1g6q_1 11 GIHEEMLQDTVRTLSYRNAIIQN-KDLFKDKIVLDVGCGTGILSMFAAKHGA-KHVIGVDMS-SIIEMAKELVELN-G-- 84 (328)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH-HHHHTTCEEEEETCTTSHHHHHHHHTCC-SEEEEEESS-THHHHHHHHHHHT-T--
T ss_pred hHHHHHhcCHHHHHHHHHHHHhh-HhhcCCCEEEEecCccHHHHHHHHHCCC-CEEEEEChH-HHHHHHHHHHHHc-C--
Confidence 34444555555544554444322 1111235799999999999999999875 489999999 6999999875321 1
Q ss_pred CCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccc
Q 045407 165 GYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNY 244 (382)
Q Consensus 165 ~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~ 244 (382)
-..+|.++++|+.++. + +..+||+|++-.-
T Consensus 85 ~~~~i~~~~~d~~~~~-----------------~---------------------------------~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 85 FSDKITLLRGKLEDVH-----------------L---------------------------------PFPKVDIIISEWM 114 (328)
T ss_dssp CTTTEEEEESCTTTSC-----------------C---------------------------------SSSCEEEEEECCC
T ss_pred CCCCEEEEECchhhcc-----------------C---------------------------------CCCcccEEEEeCc
Confidence 1247999999998765 1 1357999998532
Q ss_pred hhcccCChhHHHHHHHHHHhhccCCCcEEEEe
Q 045407 245 SCCCLHKRADLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 245 S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
..++.....+..+++.+.+.|+ |||++|++
T Consensus 115 -~~~l~~~~~~~~~l~~~~~~Lk-pgG~li~~ 144 (328)
T 1g6q_1 115 -GYFLLYESMMDTVLYARDHYLV-EGGLIFPD 144 (328)
T ss_dssp -BTTBSTTCCHHHHHHHHHHHEE-EEEEEESC
T ss_pred -hhhcccHHHHHHHHHHHHhhcC-CCeEEEEe
Confidence 2234556678889999999999 99999854
No 127
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.40 E-value=1.1e-12 Score=120.70 Aligned_cols=112 Identities=10% Similarity=0.038 Sum_probs=82.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..++++++. +|+|||+|+.|++.|+++... .+ -..++.++++|+.++..
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~-~~--~~~~v~~~~~D~~~~~~------------ 113 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAY-NQ--LEDQIEIIEYDLKKITD------------ 113 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHH-TT--CTTTEEEECSCGGGGGG------------
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHH-CC--CcccEEEEECcHHHhhh------------
Confidence 467999999999999999999874 899999999999999998532 11 11379999999977651
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc---cch-hccc------------CChhHHHH
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF---NYS-CCCL------------HKRADLVL 257 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af---n~S-~~yL------------~~r~dL~~ 257 (382)
.+...+||+|++- +.. -..+ ....++..
T Consensus 114 ------------------------------------~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 157 (259)
T 3lpm_A 114 ------------------------------------LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLED 157 (259)
T ss_dssp ------------------------------------TSCTTCEEEEEECCCC-----------------------HHHHH
T ss_pred ------------------------------------hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHH
Confidence 0124679999982 111 0011 12256788
Q ss_pred HHHHHHhhccCCCcEEEEeccC
Q 045407 258 YFKHVLHALSKKGGIFVMDLYG 279 (382)
Q Consensus 258 yFr~V~~~L~~pGGiFVfDl~g 279 (382)
.++.+++.|+ |||+|++ +++
T Consensus 158 ~l~~~~~~Lk-pgG~l~~-~~~ 177 (259)
T 3lpm_A 158 TIRVAASLLK-QGGKANF-VHR 177 (259)
T ss_dssp HHHHHHHHEE-EEEEEEE-EEC
T ss_pred HHHHHHHHcc-CCcEEEE-EEc
Confidence 9999999999 9999999 443
No 128
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.40 E-value=1.6e-12 Score=125.40 Aligned_cols=128 Identities=14% Similarity=0.088 Sum_probs=92.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.++..+|+|+|+|+.||+.|+++... ....+.++++|+.+..
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~-----~~~~~~~~~~d~~~~~------------- 258 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA-----NGVEGEVFASNVFSEV------------- 258 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH-----TTCCCEEEECSTTTTC-------------
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-----hCCCCEEEEccccccc-------------
Confidence 4579999999999999999999877899999999999999998532 1124667888875433
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc--CChhHHHHHHHHHHhhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL--HKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL--~~r~dL~~yFr~V~~~L~~pGG 271 (382)
.+.||+|++.. .+.+. ....+....|+.++++|+ |||
T Consensus 259 ---------------------------------------~~~fD~Iv~~~-~~~~g~~~~~~~~~~~l~~~~~~Lk-pgG 297 (343)
T 2pjd_A 259 ---------------------------------------KGRFDMIISNP-PFHDGMQTSLDAAQTLIRGAVRHLN-SGG 297 (343)
T ss_dssp ---------------------------------------CSCEEEEEECC-CCCSSSHHHHHHHHHHHHHHGGGEE-EEE
T ss_pred ---------------------------------------cCCeeEEEECC-CcccCccCCHHHHHHHHHHHHHhCC-CCc
Confidence 45799999854 22211 135678999999999999 999
Q ss_pred EEEEeccCCCchhhhhHhhhccCCeEEEEee
Q 045407 272 IFVMDLYGGTSSEQKLRLQRRFANFTYVWEQ 302 (382)
Q Consensus 272 iFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq 302 (382)
+|++-.+...++.. ...+.+..+..+-++
T Consensus 298 ~l~i~~~~~~~~~~--~l~~~f~~~~~~~~~ 326 (343)
T 2pjd_A 298 ELRIVANAFLPYPD--VLDETFGFHEVIAQT 326 (343)
T ss_dssp EEEEEEETTSSHHH--HHHHHHSCCEEEEEC
T ss_pred EEEEEEcCCCCcHH--HHHHhcCceEEEeeC
Confidence 99996554333332 223344555544443
No 129
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=1.6e-12 Score=117.49 Aligned_cols=103 Identities=11% Similarity=0.072 Sum_probs=80.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++..+..+|+|||+|++|++.|+++... ..++.++++|+.++...
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~----------- 137 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEY----------- 137 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGG-----------
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCcccc-----------
Confidence 3579999999999999999984356899999999999999998532 15799999999875410
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ .+ ...||+|+ +.+..+.....+++.+++.|+ |||+|
T Consensus 138 ----~-------------------------------~~-~~~~D~v~------~~~~~~~~~~~~l~~~~~~Lk-pgG~l 174 (230)
T 1fbn_A 138 ----A-------------------------------NI-VEKVDVIY------EDVAQPNQAEILIKNAKWFLK-KGGYG 174 (230)
T ss_dssp ----T-------------------------------TT-SCCEEEEE------ECCCSTTHHHHHHHHHHHHEE-EEEEE
T ss_pred ----c-------------------------------cc-CccEEEEE------EecCChhHHHHHHHHHHHhCC-CCcEE
Confidence 0 01 25699998 234555566788999999999 99999
Q ss_pred EEe
Q 045407 274 VMD 276 (382)
Q Consensus 274 VfD 276 (382)
++=
T Consensus 175 ~i~ 177 (230)
T 1fbn_A 175 MIA 177 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 130
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.39 E-value=9.2e-13 Score=117.45 Aligned_cols=108 Identities=12% Similarity=0.042 Sum_probs=80.9
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCC--cceEEEeccCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGY--SRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~--~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+|||+|||||.++..+++++. .+|+|||+|++||+.|+++... .+. .++.++++|+.++..
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~----~~~~~~~v~~~~~d~~~~~~----------- 118 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQT----LKCSSEQAEVINQSSLDFLK----------- 118 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH----TTCCTTTEEEECSCHHHHTT-----------
T ss_pred CeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHH----hCCCccceEEEECCHHHHHH-----------
Confidence 3699999999999999888886 4899999999999999998532 122 379999999865430
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCC-ccEEEEccchhcccCChhHHHHHHHHH--HhhccCC
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPA-RDIICAFNYSCCCLHKRADLVLYFKHV--LHALSKK 269 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-fDiV~afn~S~~yL~~r~dL~~yFr~V--~~~L~~p 269 (382)
. +...+ ||+|++-. .+. ..+....++.+ .+.|+ |
T Consensus 119 -----~--------------------------------~~~~~~fD~I~~~~-~~~----~~~~~~~l~~~~~~~~Lk-p 155 (201)
T 2ift_A 119 -----Q--------------------------------PQNQPHFDVVFLDP-PFH----FNLAEQAISLLCENNWLK-P 155 (201)
T ss_dssp -----S--------------------------------CCSSCCEEEEEECC-CSS----SCHHHHHHHHHHHTTCEE-E
T ss_pred -----h--------------------------------hccCCCCCEEEECC-CCC----CccHHHHHHHHHhcCccC-C
Confidence 0 01356 99999753 222 34667778888 56799 9
Q ss_pred CcEEEEeccCCC
Q 045407 270 GGIFVMDLYGGT 281 (382)
Q Consensus 270 GGiFVfDl~gg~ 281 (382)
||+|++.....+
T Consensus 156 gG~l~i~~~~~~ 167 (201)
T 2ift_A 156 NALIYVETEKDK 167 (201)
T ss_dssp EEEEEEEEESSS
T ss_pred CcEEEEEECCCC
Confidence 999999876543
No 131
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.38 E-value=4e-12 Score=126.07 Aligned_cols=146 Identities=18% Similarity=0.148 Sum_probs=103.0
Q ss_pred HHHHHHHHHhhC--CCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 99 SYLQKFFLIYVG--GRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 99 ~yl~~~f~~y~g--gr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
..+...+....+ ...+.+|||+|||||.++..+++++. +|+|||+|+.||+.|+++... .+..+.++++|+
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~-----~~~~v~~~~~D~ 289 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEA-----NALKAQALHSDV 289 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHH-----TTCCCEEEECST
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHH-----cCCCeEEEEcch
Confidence 444444443332 12245799999999999999999974 799999999999999998532 123589999999
Q ss_pred CCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc--CChhH
Q 045407 177 LQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL--HKRAD 254 (382)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL--~~r~d 254 (382)
.++. . ...+||+|++. ..+.+. ...++
T Consensus 290 ~~~~-----------------~---------------------------------~~~~fD~Ii~n-pp~~~~~~~~~~~ 318 (381)
T 3dmg_A 290 DEAL-----------------T---------------------------------EEARFDIIVTN-PPFHVGGAVILDV 318 (381)
T ss_dssp TTTS-----------------C---------------------------------TTCCEEEEEEC-CCCCTTCSSCCHH
T ss_pred hhcc-----------------c---------------------------------cCCCeEEEEEC-CchhhcccccHHH
Confidence 7765 1 13579999974 233321 12578
Q ss_pred HHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecccc
Q 045407 255 LVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFD 306 (382)
Q Consensus 255 L~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD 306 (382)
...+|+.++++|+ |||+|++-.+....+... +.+.+.++..+ ++..|-
T Consensus 319 ~~~~l~~~~~~Lk-pGG~l~iv~n~~l~~~~~--l~~~f~~v~~l-~~~gF~ 366 (381)
T 3dmg_A 319 AQAFVNVAAARLR-PGGVFFLVSNPFLKYEPL--LEEKFGAFQTL-KVAEYK 366 (381)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEECTTSCHHHH--HHHHHSCCEEE-EESSSE
T ss_pred HHHHHHHHHHhcC-cCcEEEEEEcCCCChHHH--HHHhhccEEEE-eCCCEE
Confidence 8899999999999 999999987655444432 34456666666 544443
No 132
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.38 E-value=8.7e-13 Score=121.73 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=79.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccc--cccCCCCcceEEEeccCCCc-hhhhhcccchh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLN--KVGADGYSRISLFHGNVLQP-LEAKLVRYEPQ 190 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~--kl~~d~~~RI~l~~gDV~~~-~~~~~~~~~~~ 190 (382)
..+|||+|||+|.++..+|+..+...|+|||+|+.||+.|+++... +....+..+|.++++|+.+. +.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~--------- 117 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPN--------- 117 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHH---------
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhh---------
Confidence 3468999999999999999998878899999999999999886421 11112335799999998762 20
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhH-----HHHHHHHHHhh
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD-----LVLYFKHVLHA 265 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~d-----L~~yFr~V~~~ 265 (382)
. |....+|.|++.+ +--|+..+.. ...+|+.+++.
T Consensus 118 -------~--------------------------------~~~~~~D~v~~~~-~dp~~k~~h~krr~~~~~~l~~~~~~ 157 (235)
T 3ckk_A 118 -------F--------------------------------FYKGQLTKMFFLF-PDPHFKRTKHKWRIISPTLLAEYAYV 157 (235)
T ss_dssp -------H--------------------------------CCTTCEEEEEEES-CC-----------CCCHHHHHHHHHH
T ss_pred -------h--------------------------------CCCcCeeEEEEeC-CCchhhhhhhhhhhhhHHHHHHHHHH
Confidence 0 2245789987543 3223322221 14689999999
Q ss_pred ccCCCcEEEEec
Q 045407 266 LSKKGGIFVMDL 277 (382)
Q Consensus 266 L~~pGGiFVfDl 277 (382)
|+ |||+|+|-.
T Consensus 158 Lk-pGG~l~~~t 168 (235)
T 3ckk_A 158 LR-VGGLVYTIT 168 (235)
T ss_dssp EE-EEEEEEEEE
T ss_pred CC-CCCEEEEEe
Confidence 99 999999854
No 133
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.38 E-value=2e-12 Score=119.02 Aligned_cols=105 Identities=22% Similarity=0.185 Sum_probs=81.1
Q ss_pred CCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||..+..+++.-+ ..+|+|||+|++|++.|+++... .+- ..+|.++++|+.+...
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~g~--~~~v~~~~~d~~~~l~----------- 129 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQL-AGV--DQRVTLREGPALQSLE----------- 129 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHH-TTC--TTTEEEEESCHHHHHH-----------
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEEcCHHHHHH-----------
Confidence 45799999999999999999844 46899999999999999998532 111 2379999999865330
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
. + ....+||+|++-.. ......+|+.+++.|+ |||+
T Consensus 130 --~--~--------------------------------~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~Lk-pGG~ 165 (248)
T 3tfw_A 130 --S--L--------------------------------GECPAFDLIFIDAD-------KPNNPHYLRWALRYSR-PGTL 165 (248)
T ss_dssp --T--C--------------------------------CSCCCCSEEEECSC-------GGGHHHHHHHHHHTCC-TTCE
T ss_pred --h--c--------------------------------CCCCCeEEEEECCc-------hHHHHHHHHHHHHhcC-CCeE
Confidence 0 0 00247999998542 3566789999999999 9999
Q ss_pred EEEe
Q 045407 273 FVMD 276 (382)
Q Consensus 273 FVfD 276 (382)
+|+|
T Consensus 166 lv~~ 169 (248)
T 3tfw_A 166 IIGD 169 (248)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9996
No 134
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.38 E-value=3.1e-13 Score=130.66 Aligned_cols=158 Identities=16% Similarity=0.120 Sum_probs=100.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE-eccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF-HGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~-~gDV~~~~~~~~~~~~~~~~ 192 (382)
..++||+|||||.++..|++.|. .+|+|||+|+.||+|+.+++ .|+..+ ..|++.+..
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga-~~V~aVDvs~~mL~~a~r~~---------~rv~~~~~~ni~~l~~----------- 144 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGA-KLVYAVDVGTNQLVWKLRQD---------DRVRSMEQYNFRYAEP----------- 144 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSSSCSCHHHHTC---------TTEEEECSCCGGGCCG-----------
T ss_pred ccEEEecCCCccHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhC---------cccceecccCceecch-----------
Confidence 35799999999999999999975 48999999999999977653 244333 346544330
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
.+++.+.||+|+|- .||. .+...|+.+++.|+ |||.
T Consensus 145 ------------------------------------~~l~~~~fD~v~~d-~sf~------sl~~vL~e~~rvLk-pGG~ 180 (291)
T 3hp7_A 145 ------------------------------------VDFTEGLPSFASID-VSFI------SLNLILPALAKILV-DGGQ 180 (291)
T ss_dssp ------------------------------------GGCTTCCCSEEEEC-CSSS------CGGGTHHHHHHHSC-TTCE
T ss_pred ------------------------------------hhCCCCCCCEEEEE-eeHh------hHHHHHHHHHHHcC-cCCE
Confidence 01223459999873 3443 24778999999999 9999
Q ss_pred EEEeccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcCC
Q 045407 273 FVMDLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF 352 (382)
Q Consensus 273 FVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF 352 (382)
||+=+.+ .++. .+ + ..+ ++. .++. ...+.+++.++.++|+++||
T Consensus 181 lv~lvkP--qfe~----~~---------~--~~~---------------~~G-~vrd---~~~~~~~~~~v~~~~~~~Gf 224 (291)
T 3hp7_A 181 VVALVKP--QFEA----GR---------E--QIG---------------KNG-IVRE---SSIHEKVLETVTAFAVDYGF 224 (291)
T ss_dssp EEEEECG--GGTS----CG---------G--GCC----------------CC-CCCC---HHHHHHHHHHHHHHHHHTTE
T ss_pred EEEEECc--cccc----Ch---------h--hcC---------------CCC-ccCC---HHHHHHHHHHHHHHHHHCCC
Confidence 9983321 1110 00 0 000 000 1110 11256789999999999999
Q ss_pred cEEEEEeccCchhhhhccccCc
Q 045407 353 RSVHFWLREMPDAREMRNTEGL 374 (382)
Q Consensus 353 ~~V~v~~r~~~~~~~~~~~~~~ 374 (382)
....+..... .--.+|.|-+
T Consensus 225 ~v~~~~~spi--~g~~gn~e~l 244 (291)
T 3hp7_A 225 SVKGLDFSPI--QGGHGNIEFL 244 (291)
T ss_dssp EEEEEEECSS--CCGGGCCCEE
T ss_pred EEEEEEECCC--CCCCcCHHHH
Confidence 9888654333 2234555533
No 135
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.38 E-value=6.9e-13 Score=116.25 Aligned_cols=100 Identities=14% Similarity=-0.033 Sum_probs=80.3
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..+++..+..+|+|+|+|+.|++.|+++... .+..++.++++|+.++.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~v~~~~~d~~~~~-------------- 128 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHE----LKLENIEPVQSRVEEFP-------------- 128 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH----TTCSSEEEEECCTTTSC--------------
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----cCCCCeEEEecchhhCC--------------
Confidence 479999999999999999986667899999999999999987532 12234999999987654
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
..++||+|++.. + .++..+++.+++.|+ |||+|+
T Consensus 129 -------------------------------------~~~~~D~i~~~~-----~---~~~~~~l~~~~~~L~-~gG~l~ 162 (207)
T 1jsx_A 129 -------------------------------------SEPPFDGVISRA-----F---ASLNDMVSWCHHLPG-EQGRFY 162 (207)
T ss_dssp -------------------------------------CCSCEEEEECSC-----S---SSHHHHHHHHTTSEE-EEEEEE
T ss_pred -------------------------------------ccCCcCEEEEec-----c---CCHHHHHHHHHHhcC-CCcEEE
Confidence 135699999743 2 346789999999999 999999
Q ss_pred Eecc
Q 045407 275 MDLY 278 (382)
Q Consensus 275 fDl~ 278 (382)
+-..
T Consensus 163 ~~~~ 166 (207)
T 1jsx_A 163 ALKG 166 (207)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9643
No 136
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.38 E-value=4.5e-13 Score=114.01 Aligned_cols=94 Identities=16% Similarity=0.109 Sum_probs=78.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|+++. .++.++++| .+
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~v~~~~~d---~~------------- 70 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKF---------DSVITLSDP---KE------------- 70 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHC---------TTSEEESSG---GG-------------
T ss_pred CCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhC---------CCcEEEeCC---CC-------------
Confidence 45799999999999999999984 8999999999999999982 378899998 22
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+....||+|++.+ ++.++. +...+++.+++.|+ |||+|
T Consensus 71 -------------------------------------~~~~~~D~v~~~~-~l~~~~---~~~~~l~~~~~~L~-pgG~l 108 (170)
T 3i9f_A 71 -------------------------------------IPDNSVDFILFAN-SFHDMD---DKQHVISEVKRILK-DDGRV 108 (170)
T ss_dssp -------------------------------------SCTTCEEEEEEES-CSTTCS---CHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------CCCCceEEEEEcc-chhccc---CHHHHHHHHHHhcC-CCCEE
Confidence 1246799999875 556654 56789999999999 99999
Q ss_pred EEe
Q 045407 274 VMD 276 (382)
Q Consensus 274 VfD 276 (382)
++-
T Consensus 109 ~~~ 111 (170)
T 3i9f_A 109 III 111 (170)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 137
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.38 E-value=1.5e-12 Score=115.86 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVL 177 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~ 177 (382)
.++..+.... .+.+|||+|||||.++..|++.-+ ..+|+|+|+|++|++.|+++... .+- ..+|.++++|+.
T Consensus 54 ~~l~~l~~~~----~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~v~~~~~d~~ 126 (225)
T 3tr6_A 54 QLLALLVKLM----QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEK-AGL--SDKIGLRLSPAK 126 (225)
T ss_dssp HHHHHHHHHH----TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH-TTC--TTTEEEEESCHH
T ss_pred HHHHHHHHhh----CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH-CCC--CCceEEEeCCHH
Confidence 4555444432 245799999999999999998733 46899999999999999998532 111 236999999986
Q ss_pred CchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHH
Q 045407 178 QPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVL 257 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~ 257 (382)
+.... +. ......+||+|++-. .......
T Consensus 127 ~~~~~---------------~~-----------------------------~~~~~~~fD~v~~~~-------~~~~~~~ 155 (225)
T 3tr6_A 127 DTLAE---------------LI-----------------------------HAGQAWQYDLIYIDA-------DKANTDL 155 (225)
T ss_dssp HHHHH---------------HH-----------------------------TTTCTTCEEEEEECS-------CGGGHHH
T ss_pred HHHHH---------------hh-----------------------------hccCCCCccEEEECC-------CHHHHHH
Confidence 54300 00 000126799998533 2456788
Q ss_pred HHHHHHhhccCCCcEEEEe
Q 045407 258 YFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 258 yFr~V~~~L~~pGGiFVfD 276 (382)
+|+.+++.|+ |||+||+|
T Consensus 156 ~l~~~~~~L~-pgG~lv~~ 173 (225)
T 3tr6_A 156 YYEESLKLLR-EGGLIAVD 173 (225)
T ss_dssp HHHHHHHHEE-EEEEEEEE
T ss_pred HHHHHHHhcC-CCcEEEEe
Confidence 9999999999 99999996
No 138
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.37 E-value=2.2e-12 Score=124.30 Aligned_cols=122 Identities=14% Similarity=0.082 Sum_probs=84.9
Q ss_pred CCCcccccCCCc--cHhHHHHHH-hCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccch
Q 045407 113 QPLHLQEDFCGT--ALLSTEWLR-SDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEP 189 (382)
Q Consensus 113 ~p~~LLEl~CGT--G~LS~elar-~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~ 189 (382)
....|||+|||+ +.++.++++ ..+..+|+|||+|+.||++|+++... .+..++.|+++|++++...
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~----~~~~~~~~v~aD~~~~~~~------- 146 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS----TPEGRTAYVEADMLDPASI------- 146 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC----CSSSEEEEEECCTTCHHHH-------
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc----CCCCcEEEEEecccChhhh-------
Confidence 346899999997 434455544 45678999999999999999988532 2234799999999997510
Q ss_pred hhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCC
Q 045407 190 QKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKK 269 (382)
Q Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~p 269 (382)
...-.+ ...|......+|+ +|.++-||.+.++...+++.++++|+ |
T Consensus 147 ---l~~~~~-----------------------------~~~~D~~~p~av~-~~avLH~l~d~~~p~~~l~~l~~~L~-P 192 (277)
T 3giw_A 147 ---LDAPEL-----------------------------RDTLDLTRPVALT-VIAIVHFVLDEDDAVGIVRRLLEPLP-S 192 (277)
T ss_dssp ---HTCHHH-----------------------------HTTCCTTSCCEEE-EESCGGGSCGGGCHHHHHHHHHTTSC-T
T ss_pred ---hccccc-----------------------------ccccCcCCcchHH-hhhhHhcCCchhhHHHHHHHHHHhCC-C
Confidence 000000 0001122233444 57788899887778999999999999 9
Q ss_pred CcEEEEeccC
Q 045407 270 GGIFVMDLYG 279 (382)
Q Consensus 270 GGiFVfDl~g 279 (382)
||+|++....
T Consensus 193 GG~Lvls~~~ 202 (277)
T 3giw_A 193 GSYLAMSIGT 202 (277)
T ss_dssp TCEEEEEEEC
T ss_pred CcEEEEEecc
Confidence 9999996543
No 139
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.37 E-value=1.5e-12 Score=118.83 Aligned_cols=119 Identities=14% Similarity=0.105 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVL 177 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~ 177 (382)
.++..+... .+.+...+|||+|||||..+..|++.- +..+|+|||+|++|++.|+++... .+- ...+|.++++|..
T Consensus 43 ~~l~~l~~~-~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~-~~~~i~~~~gda~ 119 (221)
T 3dr5_A 43 QLLTTLAAT-TNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFRE-AGY-SPSRVRFLLSRPL 119 (221)
T ss_dssp HHHHHHHHH-SCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHH-TTC-CGGGEEEECSCHH
T ss_pred HHHHHHHHh-hCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC-CcCcEEEEEcCHH
Confidence 445444443 232212378999999999999999863 356899999999999999998532 111 1148999999986
Q ss_pred CchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHH
Q 045407 178 QPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVL 257 (382)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~ 257 (382)
+... .+..++||+|++-.. ......
T Consensus 120 ~~l~------------------------------------------------~~~~~~fD~V~~d~~-------~~~~~~ 144 (221)
T 3dr5_A 120 DVMS------------------------------------------------RLANDSYQLVFGQVS-------PMDLKA 144 (221)
T ss_dssp HHGG------------------------------------------------GSCTTCEEEEEECCC-------TTTHHH
T ss_pred HHHH------------------------------------------------HhcCCCcCeEEEcCc-------HHHHHH
Confidence 5431 011357999987532 245577
Q ss_pred HHHHHHhhccCCCcEEEEe
Q 045407 258 YFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 258 yFr~V~~~L~~pGGiFVfD 276 (382)
+|+.+++.|+ |||++|+|
T Consensus 145 ~l~~~~~~Lk-pGG~lv~d 162 (221)
T 3dr5_A 145 LVDAAWPLLR-RGGALVLA 162 (221)
T ss_dssp HHHHHHHHEE-EEEEEEET
T ss_pred HHHHHHHHcC-CCcEEEEe
Confidence 9999999999 99999996
No 140
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.37 E-value=1.9e-12 Score=113.98 Aligned_cols=101 Identities=14% Similarity=0.034 Sum_probs=79.6
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|||+|||||.++..+++.+ .+|+|+|+|++|++.|+++... .+..++.++++|+.+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~----~~~~~v~~~~~d~~~~~----------- 138 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKN----LDLHNVSTRHGDGWQGW----------- 138 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHH----TTCCSEEEEESCGGGCC-----------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHH----cCCCceEEEECCcccCC-----------
Confidence 335689999999999999999996 4799999999999999998532 23347999999986644
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
. ...+||+|++.. ++.++.+ .+++.|+ |||
T Consensus 139 ------~---------------------------------~~~~~D~i~~~~-~~~~~~~---------~~~~~L~-pgG 168 (210)
T 3lbf_A 139 ------Q---------------------------------ARAPFDAIIVTA-APPEIPT---------ALMTQLD-EGG 168 (210)
T ss_dssp ------G---------------------------------GGCCEEEEEESS-BCSSCCT---------HHHHTEE-EEE
T ss_pred ------c---------------------------------cCCCccEEEEcc-chhhhhH---------HHHHhcc-cCc
Confidence 1 135799999875 4555553 5788999 999
Q ss_pred EEEEeccC
Q 045407 272 IFVMDLYG 279 (382)
Q Consensus 272 iFVfDl~g 279 (382)
++|+-+.+
T Consensus 169 ~lv~~~~~ 176 (210)
T 3lbf_A 169 ILVLPVGE 176 (210)
T ss_dssp EEEEEECS
T ss_pred EEEEEEcC
Confidence 99998765
No 141
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.36 E-value=1.2e-12 Score=116.87 Aligned_cols=108 Identities=17% Similarity=0.036 Sum_probs=80.5
Q ss_pred CCcccccCCC-ccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCG-TALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CG-TG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+||| ||.++..+++.. ..+|+|+|+|+.||+.|+++... .+ .++.++++|+..+..
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~----~~-~~v~~~~~d~~~~~~----------- 118 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIER----NN-SNVRLVKSNGGIIKG----------- 118 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHH----TT-CCCEEEECSSCSSTT-----------
T ss_pred CCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHH----hC-CCcEEEeCCchhhhh-----------
Confidence 4579999999 999999999994 35899999999999999998532 12 279999999754431
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc----------------CChhHHH
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL----------------HKRADLV 256 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL----------------~~r~dL~ 256 (382)
+..+.||+|++-. .+... +..+.+.
T Consensus 119 --------------------------------------~~~~~fD~I~~np-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T 3evz_A 119 --------------------------------------VVEGTFDVIFSAP-PYYDKPLGRVLTEREAIGGGKYGEEFSV 159 (230)
T ss_dssp --------------------------------------TCCSCEEEEEECC-CCC---------------CCSSSCHHHH
T ss_pred --------------------------------------cccCceeEEEECC-CCcCCccccccChhhhhccCccchHHHH
Confidence 1136799999642 22211 1223358
Q ss_pred HHHHHHHhhccCCCcEEEEecc
Q 045407 257 LYFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 257 ~yFr~V~~~L~~pGGiFVfDl~ 278 (382)
..++.+++.|+ |||+|++=+.
T Consensus 160 ~~l~~~~~~Lk-pgG~l~~~~~ 180 (230)
T 3evz_A 160 KLLEEAFDHLN-PGGKVALYLP 180 (230)
T ss_dssp HHHHHHGGGEE-EEEEEEEEEE
T ss_pred HHHHHHHHHhC-CCeEEEEEec
Confidence 89999999999 9999999543
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.36 E-value=4.1e-12 Score=125.47 Aligned_cols=133 Identities=14% Similarity=0.069 Sum_probs=93.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..|++.++..+|+|||+|+.|++.|+++... .+-....++.++++|+.++.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~-ngl~~~~~v~~~~~D~~~~~------------- 288 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET-NMPEALDRCEFMINNALSGV------------- 288 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCGGGGGGEEEEECSTTTTC-------------
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHH-cCCCcCceEEEEechhhccC-------------
Confidence 4689999999999999999998778999999999999999998543 11111236889999987643
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc--CChhHHHHHHHHHHhhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL--HKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL--~~r~dL~~yFr~V~~~L~~pGG 271 (382)
....||+|++-. .|... ........+|+.++++|+ |||
T Consensus 289 --------------------------------------~~~~fD~Ii~np-pfh~~~~~~~~~~~~~l~~~~~~Lk-pgG 328 (375)
T 4dcm_A 289 --------------------------------------EPFRFNAVLCNP-PFHQQHALTDNVAWEMFHHARRCLK-ING 328 (375)
T ss_dssp --------------------------------------CTTCEEEEEECC-CC-------CCHHHHHHHHHHHHEE-EEE
T ss_pred --------------------------------------CCCCeeEEEECC-CcccCcccCHHHHHHHHHHHHHhCC-CCc
Confidence 145799999842 22211 123445578999999999 999
Q ss_pred EEEEeccCCCchhhhhHhhhccCCeEEEEee
Q 045407 272 IFVMDLYGGTSSEQKLRLQRRFANFTYVWEQ 302 (382)
Q Consensus 272 iFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq 302 (382)
+|++=.+....+.. .+.+.+.++..+-++
T Consensus 329 ~l~iv~n~~~~~~~--~l~~~fg~~~~~a~~ 357 (375)
T 4dcm_A 329 ELYIVANRHLDYFH--KLKKIFGNCTTIATN 357 (375)
T ss_dssp EEEEEEETTSCHHH--HHHHHHSCCEEEEEC
T ss_pred EEEEEEECCcCHHH--HHHHhcCCEEEEeeC
Confidence 99995544333433 234456666655554
No 143
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=2.8e-12 Score=119.24 Aligned_cols=119 Identities=8% Similarity=-0.009 Sum_probs=82.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCC-CcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADG-YSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~-~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||.++..++++.+..+|+|||+|++|++.|+++... +...+ ..++.++++|+.++.....
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~-~~~~~l~~~v~~~~~D~~~~~~~~~-------- 107 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLEL-PDNAAFSARIEVLEADVTLRAKARV-------- 107 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTS-GGGTTTGGGEEEEECCTTCCHHHHH--------
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh-hhhCCCcceEEEEeCCHHHHhhhhh--------
Confidence 4579999999999999999998767899999999999999998521 00011 1379999999988731000
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc--ch------------hcccCChhHHHHH
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN--YS------------CCCLHKRADLVLY 258 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn--~S------------~~yL~~r~dL~~y 258 (382)
...+....||+|++-- +. +........+...
T Consensus 108 -----------------------------------~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~ 152 (260)
T 2ozv_A 108 -----------------------------------EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDW 152 (260)
T ss_dssp -----------------------------------HTTCCTTCEEEEEECCCC---------------------CCHHHH
T ss_pred -----------------------------------hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHH
Confidence 0002245799999841 10 1111122347889
Q ss_pred HHHHHhhccCCCcEEEEec
Q 045407 259 FKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfDl 277 (382)
++.+++.|+ |||+|+|-+
T Consensus 153 l~~~~~~Lk-pgG~l~~~~ 170 (260)
T 2ozv_A 153 IRTASAIMV-SGGQLSLIS 170 (260)
T ss_dssp HHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHHcC-CCCEEEEEE
Confidence 999999999 999999943
No 144
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.36 E-value=2.8e-13 Score=130.53 Aligned_cols=149 Identities=14% Similarity=0.122 Sum_probs=101.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..++++.+..+++|+|+ +.|++.|++. .+|.++++|+.+ +
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~-~------------- 248 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN----------ENLNFVGGDMFK-S------------- 248 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC----------SSEEEEECCTTT-C-------------
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC----------CCcEEEeCccCC-C-------------
Confidence 35799999999999999999998889999999 7899655431 359999999876 3
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCC---C
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKK---G 270 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~p---G 270 (382)
.+.||+|++.+ ++.++ ..++....+++++++|+ | |
T Consensus 249 ---------------------------------------~~~~D~v~~~~-vlh~~-~d~~~~~~l~~~~~~L~-p~~~g 286 (358)
T 1zg3_A 249 ---------------------------------------IPSADAVLLKW-VLHDW-NDEQSLKILKNSKEAIS-HKGKD 286 (358)
T ss_dssp ---------------------------------------CCCCSEEEEES-CGGGS-CHHHHHHHHHHHHHHTG-GGGGG
T ss_pred ---------------------------------------CCCceEEEEcc-cccCC-CHHHHHHHHHHHHHhCC-CCCCC
Confidence 23599999876 44443 34567799999999999 8 9
Q ss_pred cEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeeeeeeeeEEecCHHHHHHHHHH
Q 045407 271 GIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEE 349 (382)
Q Consensus 271 GiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~Lee 349 (382)
|.+|+ |...+..... +. +.|....+|.. +.. ....+.++..|++.+|++
T Consensus 287 G~l~i~e~~~~~~~~~--------~~--~~~~~~~~d~~---------~~~-----------~~~g~~~t~~e~~~ll~~ 336 (358)
T 1zg3_A 287 GKVIIIDISIDETSDD--------RG--LTELQLDYDLV---------MLT-----------MFLGKERTKQEWEKLIYD 336 (358)
T ss_dssp CEEEEEECEECTTCSC--------HH--HHHHHHHHHHH---------HHH-----------HHSCCCEEHHHHHHHHHH
T ss_pred cEEEEEEeccCCCCcc--------ch--hhhHHHhhCHH---------Hhc-----------cCCCCCCCHHHHHHHHHH
Confidence 97666 7652211100 00 00000011110 000 001246799999999999
Q ss_pred cCCcEEEEEe
Q 045407 350 AGFRSVHFWL 359 (382)
Q Consensus 350 AGF~~V~v~~ 359 (382)
|||+.++++-
T Consensus 337 aGf~~~~~~~ 346 (358)
T 1zg3_A 337 AGFSSYKITP 346 (358)
T ss_dssp TTCCEEEEEE
T ss_pred cCCCeeEEEe
Confidence 9999999873
No 145
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.36 E-value=2.3e-12 Score=109.73 Aligned_cols=105 Identities=19% Similarity=0.184 Sum_probs=81.0
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++... .+. ..++.++++|+.++.
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~-~~~--~~~~~~~~~d~~~~~----------- 95 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQR-HGL--GDNVTLMEGDAPEAL----------- 95 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHH-TTC--CTTEEEEESCHHHHH-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHH-cCC--CcceEEEecCHHHhc-----------
Confidence 335689999999999999999998 5899999999999999987532 111 147899999976522
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG 271 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG 271 (382)
. ..+.||+|++... + ..+...++.+++.|+ |||
T Consensus 96 ------~---------------------------------~~~~~D~v~~~~~----~---~~~~~~l~~~~~~l~-~gG 128 (192)
T 1l3i_A 96 ------C---------------------------------KIPDIDIAVVGGS----G---GELQEILRIIKDKLK-PGG 128 (192)
T ss_dssp ------T---------------------------------TSCCEEEEEESCC----T---TCHHHHHHHHHHTEE-EEE
T ss_pred ------c---------------------------------cCCCCCEEEECCc----h---HHHHHHHHHHHHhcC-CCc
Confidence 0 0247999997642 1 246889999999999 999
Q ss_pred EEEEeccC
Q 045407 272 IFVMDLYG 279 (382)
Q Consensus 272 iFVfDl~g 279 (382)
++++....
T Consensus 129 ~l~~~~~~ 136 (192)
T 1l3i_A 129 RIIVTAIL 136 (192)
T ss_dssp EEEEEECB
T ss_pred EEEEEecC
Confidence 99997653
No 146
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.35 E-value=4.8e-12 Score=117.23 Aligned_cols=96 Identities=19% Similarity=0.182 Sum_probs=76.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.|. +|+|+|+|+.|++.|+++... .+. .+.++++|+.++.
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~----~~~-~v~~~~~d~~~~~------------- 180 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKR----NGV-RPRFLEGSLEAAL------------- 180 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHH----TTC-CCEEEESCHHHHG-------------
T ss_pred CCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHH----cCC-cEEEEECChhhcC-------------
Confidence 45799999999999999999986 799999999999999998532 121 2888998875421
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
...+||+|++.. . ...+...++.+++.|+ |||+|
T Consensus 181 --------------------------------------~~~~fD~Vv~n~-~------~~~~~~~l~~~~~~Lk-pgG~l 214 (254)
T 2nxc_A 181 --------------------------------------PFGPFDLLVANL-Y------AELHAALAPRYREALV-PGGRA 214 (254)
T ss_dssp --------------------------------------GGCCEEEEEEEC-C------HHHHHHHHHHHHHHEE-EEEEE
T ss_pred --------------------------------------cCCCCCEEEECC-c------HHHHHHHHHHHHHHcC-CCCEE
Confidence 135699999742 1 2457889999999999 99999
Q ss_pred EE
Q 045407 274 VM 275 (382)
Q Consensus 274 Vf 275 (382)
++
T Consensus 215 il 216 (254)
T 2nxc_A 215 LL 216 (254)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 147
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.35 E-value=1.8e-12 Score=111.14 Aligned_cols=108 Identities=14% Similarity=0.112 Sum_probs=79.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.+. .+|+|+|+|++|++.|+++... .+ -..++.++++|+.++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~-~~--~~~~~~~~~~d~~~~~~------------ 95 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGM-SAAVLVEKNRKAQAIIQDNIIM-TK--AENRFTLLKMEAERAID------------ 95 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHHT-TT--CGGGEEEECSCHHHHHH------------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHH-cC--CCCceEEEECcHHHhHH------------
Confidence 46799999999999999999864 5899999999999999998532 11 11379999999866420
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHH--hhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVL--HALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~--~~L~~pGG 271 (382)
. ....||+|++.. .+. .......++.+. +.|+ |||
T Consensus 96 ----~---------------------------------~~~~fD~i~~~~-~~~----~~~~~~~~~~l~~~~~L~-~gG 132 (177)
T 2esr_A 96 ----C---------------------------------LTGRFDLVFLDP-PYA----KETIVATIEALAAKNLLS-EQV 132 (177)
T ss_dssp ----H---------------------------------BCSCEEEEEECC-SSH----HHHHHHHHHHHHHTTCEE-EEE
T ss_pred ----h---------------------------------hcCCCCEEEECC-CCC----cchHHHHHHHHHhCCCcC-CCc
Confidence 0 034599999753 221 134455566665 8999 999
Q ss_pred EEEEeccCC
Q 045407 272 IFVMDLYGG 280 (382)
Q Consensus 272 iFVfDl~gg 280 (382)
+|++.....
T Consensus 133 ~l~~~~~~~ 141 (177)
T 2esr_A 133 MVVCETDKT 141 (177)
T ss_dssp EEEEEEETT
T ss_pred EEEEEECCc
Confidence 999987653
No 148
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.35 E-value=1.5e-12 Score=109.72 Aligned_cols=109 Identities=17% Similarity=0.076 Sum_probs=78.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.++. |+|+|+|++|++.|+++... .+ .++.++++|+.++...
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~----~~-~~~~~~~~d~~~~~~~----------- 103 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRR----TG-LGARVVALPVEVFLPE----------- 103 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHH----HT-CCCEEECSCHHHHHHH-----------
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHH----cC-CceEEEeccHHHHHHh-----------
Confidence 347999999999999999999874 99999999999999998532 11 1789999998764200
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+. . ...+||+|++.. .+. ....++...+.+ ++.|+ |||+|
T Consensus 104 ----~~----------------~---------------~~~~~D~i~~~~-~~~--~~~~~~~~~~~~-~~~L~-~gG~~ 143 (171)
T 1ws6_A 104 ----AK----------------A---------------QGERFTVAFMAP-PYA--MDLAALFGELLA-SGLVE-AGGLY 143 (171)
T ss_dssp ----HH----------------H---------------TTCCEEEEEECC-CTT--SCTTHHHHHHHH-HTCEE-EEEEE
T ss_pred ----hh----------------c---------------cCCceEEEEECC-CCc--hhHHHHHHHHHh-hcccC-CCcEE
Confidence 00 0 023699999854 222 333444444444 59999 99999
Q ss_pred EEeccCC
Q 045407 274 VMDLYGG 280 (382)
Q Consensus 274 VfDl~gg 280 (382)
++.....
T Consensus 144 ~~~~~~~ 150 (171)
T 1ws6_A 144 VLQHPKD 150 (171)
T ss_dssp EEEEETT
T ss_pred EEEeCCc
Confidence 9977643
No 149
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.35 E-value=2.3e-12 Score=122.22 Aligned_cols=62 Identities=18% Similarity=0.221 Sum_probs=51.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|||+|||||.++..+++. +..+|+|+|+|++||++|+++... .+- ..++.++++|+.++.
T Consensus 125 ~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~-~~l--~~~v~~~~~D~~~~~ 186 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAER-HGV--SDRFFVRKGEFLEPF 186 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHH-TTC--TTSEEEEESSTTGGG
T ss_pred CEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-cCC--CCceEEEECcchhhc
Confidence 47999999999999999999 667899999999999999998533 111 136999999987643
No 150
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.34 E-value=2.5e-12 Score=115.99 Aligned_cols=104 Identities=10% Similarity=0.027 Sum_probs=80.2
Q ss_pred CcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
.+|||+|||||.++..+++. |+..+|+|||+|+.|++.+.+++... .++.++++|+.++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~------------ 140 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHK------------ 140 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGG------------
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhh------------
Confidence 47999999999999999998 45568999999999888877765321 479999999987541
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+. +....||+|++... .......+++++++.|+ |||+|
T Consensus 141 ----~~-------------------------------~~~~~~D~V~~~~~------~~~~~~~~~~~~~~~Lk-pgG~l 178 (233)
T 2ipx_A 141 ----YR-------------------------------MLIAMVDVIFADVA------QPDQTRIVALNAHTFLR-NGGHF 178 (233)
T ss_dssp ----GG-------------------------------GGCCCEEEEEECCC------CTTHHHHHHHHHHHHEE-EEEEE
T ss_pred ----hc-------------------------------ccCCcEEEEEEcCC------CccHHHHHHHHHHHHcC-CCeEE
Confidence 00 01357999998332 34455677889999999 99999
Q ss_pred EEecc
Q 045407 274 VMDLY 278 (382)
Q Consensus 274 VfDl~ 278 (382)
++.+.
T Consensus 179 ~i~~~ 183 (233)
T 2ipx_A 179 VISIK 183 (233)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99765
No 151
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=1.6e-12 Score=127.19 Aligned_cols=112 Identities=16% Similarity=0.171 Sum_probs=86.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
|.+||++|||+|.++.++++..+..+|++||||++|+++|+++... ....|+.++++|.+++..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~----~~~~rv~v~~~Da~~~l~------------ 153 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI----PRAPRVKIRVDDARMVAE------------ 153 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC----CCTTTEEEEESCHHHHHH------------
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc----cCCCceEEEECcHHHHHh------------
Confidence 4589999999999999999976667899999999999999998532 123589999999876531
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~pGG 271 (382)
.+...+||+|++-.+.-.+.. ..| ..+|+.++++|+ |||
T Consensus 154 ------------------------------------~~~~~~fDvIi~D~~~~~~~~--~~L~t~efl~~~~r~Lk-pgG 194 (317)
T 3gjy_A 154 ------------------------------------SFTPASRDVIIRDVFAGAITP--QNFTTVEFFEHCHRGLA-PGG 194 (317)
T ss_dssp ------------------------------------TCCTTCEEEEEECCSTTSCCC--GGGSBHHHHHHHHHHEE-EEE
T ss_pred ------------------------------------hccCCCCCEEEECCCCccccc--hhhhHHHHHHHHHHhcC-CCc
Confidence 011357999998544433322 233 689999999999 999
Q ss_pred EEEEeccCC
Q 045407 272 IFVMDLYGG 280 (382)
Q Consensus 272 iFVfDl~gg 280 (382)
+||+.+...
T Consensus 195 vlv~~~~~~ 203 (317)
T 3gjy_A 195 LYVANCGDH 203 (317)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEecCC
Confidence 999988643
No 152
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.34 E-value=2.7e-12 Score=114.49 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=78.0
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..+++++. .+|+|||+|+.||+.|+++... .+..++.++++|+.++..
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~----~~~~~v~~~~~D~~~~~~------------- 117 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLAT----LKAGNARVVNSNAMSFLA------------- 117 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH----TTCCSEEEECSCHHHHHS-------------
T ss_pred CeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHH----cCCCcEEEEECCHHHHHh-------------
Confidence 3699999999999999888886 3899999999999999988532 122479999999865330
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHh--hccCCCcE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLH--ALSKKGGI 272 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~--~L~~pGGi 272 (382)
.....||+|++-. .|. .......++.+.+ .|+ |||+
T Consensus 118 ------------------------------------~~~~~fD~V~~~~-p~~----~~~~~~~l~~l~~~~~L~-pgG~ 155 (202)
T 2fpo_A 118 ------------------------------------QKGTPHNIVFVDP-PFR----RGLLEETINLLEDNGWLA-DEAL 155 (202)
T ss_dssp ------------------------------------SCCCCEEEEEECC-SSS----TTTHHHHHHHHHHTTCEE-EEEE
T ss_pred ------------------------------------hcCCCCCEEEECC-CCC----CCcHHHHHHHHHhcCccC-CCcE
Confidence 0135799998743 222 2345566677765 498 9999
Q ss_pred EEEeccC
Q 045407 273 FVMDLYG 279 (382)
Q Consensus 273 FVfDl~g 279 (382)
|++....
T Consensus 156 l~i~~~~ 162 (202)
T 2fpo_A 156 IYVESEV 162 (202)
T ss_dssp EEEEEEG
T ss_pred EEEEECC
Confidence 9998764
No 153
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.34 E-value=3.5e-12 Score=115.65 Aligned_cols=134 Identities=17% Similarity=0.132 Sum_probs=90.8
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE
Q 045407 94 PKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF 172 (382)
Q Consensus 94 p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~ 172 (382)
.+....++..+.... . +.+|||+|||+|.++..|++..+ ..+|+|+|+|+++++.|+++... .+. ..+|.++
T Consensus 45 ~~~~~~~l~~l~~~~-~---~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~--~~~v~~~ 117 (239)
T 2hnk_A 45 SPEEGQFLNILTKIS-G---AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE-NGL--ENKIFLK 117 (239)
T ss_dssp CHHHHHHHHHHHHHH-T---CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-TTC--GGGEEEE
T ss_pred CHHHHHHHHHHHHhh-C---cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCCEEEE
Confidence 344456666655432 2 45799999999999999999854 46899999999999999998532 111 1369999
Q ss_pred eccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCC--CCccEEEEccchhcccC
Q 045407 173 HGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSL--PARDIICAFNYSCCCLH 250 (382)
Q Consensus 173 ~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~fDiV~afn~S~~yL~ 250 (382)
++|+.+... .. .. +.....-...|.. .+||+|++..
T Consensus 118 ~~d~~~~~~-~~------------~~----------------------~~~~~~~~~~f~~~~~~fD~I~~~~------- 155 (239)
T 2hnk_A 118 LGSALETLQ-VL------------ID----------------------SKSAPSWASDFAFGPSSIDLFFLDA------- 155 (239)
T ss_dssp ESCHHHHHH-HH------------HH----------------------CSSCCGGGTTTCCSTTCEEEEEECS-------
T ss_pred ECCHHHHHH-HH------------Hh----------------------hcccccccccccCCCCCcCEEEEeC-------
Confidence 999765320 00 00 0000000112444 6799998763
Q ss_pred ChhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 251 KRADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 251 ~r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
....+..+|+.+++.|+ |||++|++.
T Consensus 156 ~~~~~~~~l~~~~~~L~-pgG~lv~~~ 181 (239)
T 2hnk_A 156 DKENYPNYYPLILKLLK-PGGLLIADN 181 (239)
T ss_dssp CGGGHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcC-CCeEEEEEc
Confidence 23566789999999999 999999974
No 154
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=6.1e-12 Score=106.53 Aligned_cols=99 Identities=11% Similarity=0.004 Sum_probs=76.7
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++... .+..++.++++|+.++.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~----~~~~~~~~~~~d~~~~~------------ 96 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRC--KFVYAIDYLDGAIEVTKQNLAK----FNIKNCQIIKGRAEDVL------------ 96 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTS--SEEEEEECSHHHHHHHHHHHHH----TTCCSEEEEESCHHHHG------------
T ss_pred CCCEEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHH----cCCCcEEEEECCccccc------------
Confidence 34579999999999999999943 5899999999999999998532 12247999999986522
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
..+.||+|++..- .++...++.+++. |||+
T Consensus 97 ---------------------------------------~~~~~D~i~~~~~--------~~~~~~l~~~~~~---~gG~ 126 (183)
T 2yxd_A 97 ---------------------------------------DKLEFNKAFIGGT--------KNIEKIIEILDKK---KINH 126 (183)
T ss_dssp ---------------------------------------GGCCCSEEEECSC--------SCHHHHHHHHHHT---TCCE
T ss_pred ---------------------------------------cCCCCcEEEECCc--------ccHHHHHHHHhhC---CCCE
Confidence 1256999998764 4556777777777 6999
Q ss_pred EEEeccC
Q 045407 273 FVMDLYG 279 (382)
Q Consensus 273 FVfDl~g 279 (382)
|++...+
T Consensus 127 l~~~~~~ 133 (183)
T 2yxd_A 127 IVANTIV 133 (183)
T ss_dssp EEEEESC
T ss_pred EEEEecc
Confidence 9997654
No 155
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.33 E-value=3.5e-13 Score=124.77 Aligned_cols=108 Identities=9% Similarity=0.051 Sum_probs=79.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
|.+|||+|||||.++..|+...+..+++|+|+|+.||+.|+++... ++.. .++.+ +|.....
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~-~g~~--~~v~~--~d~~~~~------------- 111 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGK-LKTT--IKYRF--LNKESDV------------- 111 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHH-SCCS--SEEEE--ECCHHHH-------------
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHh-cCCC--ccEEE--ecccccC-------------
Confidence 7789999999999999999998889999999999999999998532 2221 14544 4542221
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
..++||+|++++.-. || .+....+..+++.|+ |||+|
T Consensus 112 --------------------------------------~~~~~DvVLa~k~LH-lL---~~~~~al~~v~~~L~-pggvf 148 (200)
T 3fzg_A 112 --------------------------------------YKGTYDVVFLLKMLP-VL---KQQDVNILDFLQLFH-TQNFV 148 (200)
T ss_dssp --------------------------------------TTSEEEEEEEETCHH-HH---HHTTCCHHHHHHTCE-EEEEE
T ss_pred --------------------------------------CCCCcChhhHhhHHH-hh---hhhHHHHHHHHHHhC-CCCEE
Confidence 146699999998544 44 344555558999999 99999
Q ss_pred EE-e--ccCCCc
Q 045407 274 VM-D--LYGGTS 282 (382)
Q Consensus 274 Vf-D--l~gg~s 282 (382)
|- + -.+|.+
T Consensus 149 ISfptksl~Gr~ 160 (200)
T 3fzg_A 149 ISFPIKSLSGKE 160 (200)
T ss_dssp EEEECCCCC--C
T ss_pred EEeChHHhcCCC
Confidence 97 7 444443
No 156
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.33 E-value=3.6e-12 Score=123.53 Aligned_cols=126 Identities=14% Similarity=0.064 Sum_probs=89.2
Q ss_pred cCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEE
Q 045407 92 QSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISL 171 (382)
Q Consensus 92 q~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l 171 (382)
++..-...|...++.. .....+.+|||+|||||.++..+++.|. .+|+|||+|+ |++.|+++... .+ -..+|.+
T Consensus 30 ~d~~r~~~y~~~i~~~-l~~~~~~~VLDiGcGtG~ls~~la~~g~-~~V~~vD~s~-~~~~a~~~~~~-~~--l~~~v~~ 103 (348)
T 2y1w_A 30 QDYVRTGTYQRAILQN-HTDFKDKIVLDVGCGSGILSFFAAQAGA-RKIYAVEAST-MAQHAEVLVKS-NN--LTDRIVV 103 (348)
T ss_dssp TCHHHHHHHHHHHHHT-GGGTTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-HHHHHHHHHHH-TT--CTTTEEE
T ss_pred cchHHHHHHHHHHHhc-cccCCcCEEEEcCCCccHHHHHHHhCCC-CEEEEECCHH-HHHHHHHHHHH-cC--CCCcEEE
Confidence 3333333455555543 2223356899999999999999999875 4899999996 99999887432 11 1147999
Q ss_pred EeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCC
Q 045407 172 FHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHK 251 (382)
Q Consensus 172 ~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~ 251 (382)
+++|+.+++ + .++||+|++..- +.+ ..
T Consensus 104 ~~~d~~~~~-----------------~----------------------------------~~~~D~Ivs~~~-~~~-~~ 130 (348)
T 2y1w_A 104 IPGKVEEVS-----------------L----------------------------------PEQVDIIISEPM-GYM-LF 130 (348)
T ss_dssp EESCTTTCC-----------------C----------------------------------SSCEEEEEECCC-BTT-BT
T ss_pred EEcchhhCC-----------------C----------------------------------CCceeEEEEeCc-hhc-CC
Confidence 999997765 2 356999998642 222 23
Q ss_pred hhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 252 RADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 252 r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
.+.+...|.++++.|+ |||++|+..
T Consensus 131 ~~~~~~~l~~~~~~Lk-pgG~li~~~ 155 (348)
T 2y1w_A 131 NERMLESYLHAKKYLK-PSGNMFPTI 155 (348)
T ss_dssp TTSHHHHHHHGGGGEE-EEEEEESCE
T ss_pred hHHHHHHHHHHHhhcC-CCeEEEEec
Confidence 3567888899999999 999999753
No 157
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.33 E-value=3.4e-12 Score=112.70 Aligned_cols=82 Identities=15% Similarity=0.129 Sum_probs=65.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..++ .+|+|+|+|+. ++.++++|+.+++
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~~~------------- 110 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQVP------------- 110 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTSCS-------------
T ss_pred CCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEeccccCC-------------
Confidence 4679999999999998874 36999999996 2457888987654
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+...+||+|++.. ++ |. .+...+++.++++|+ |||++
T Consensus 111 -------------------------------------~~~~~fD~v~~~~-~l---~~-~~~~~~l~~~~~~L~-~gG~l 147 (215)
T 2zfu_A 111 -------------------------------------LEDESVDVAVFCL-SL---MG-TNIRDFLEEANRVLK-PGGLL 147 (215)
T ss_dssp -------------------------------------CCTTCEEEEEEES-CC---CS-SCHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------CCCCCEeEEEEeh-hc---cc-cCHHHHHHHHHHhCC-CCeEE
Confidence 1245799999864 33 22 577899999999999 99999
Q ss_pred EE
Q 045407 274 VM 275 (382)
Q Consensus 274 Vf 275 (382)
++
T Consensus 148 ~i 149 (215)
T 2zfu_A 148 KV 149 (215)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 158
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.33 E-value=9.3e-13 Score=122.50 Aligned_cols=102 Identities=16% Similarity=0.070 Sum_probs=80.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.+++.|++..+..+|+|||+|+.|+++|+++... + +..+|.++++|+.++...
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~---~l~~v~~~~~d~~~~~~~----------- 145 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEV-L---GLKGARALWGRAEVLARE----------- 145 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-H---TCSSEEEEECCHHHHTTS-----------
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-h---CCCceEEEECcHHHhhcc-----------
Confidence 4689999999999999999987778999999999999999998533 2 223599999998654410
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
.....+||+|+|-.. .++...++.+++.|+ |||+|
T Consensus 146 ------------------------------------~~~~~~fD~I~s~a~--------~~~~~ll~~~~~~Lk-pgG~l 180 (249)
T 3g89_A 146 ------------------------------------AGHREAYARAVARAV--------APLCVLSELLLPFLE-VGGAA 180 (249)
T ss_dssp ------------------------------------TTTTTCEEEEEEESS--------CCHHHHHHHHGGGEE-EEEEE
T ss_pred ------------------------------------cccCCCceEEEECCc--------CCHHHHHHHHHHHcC-CCeEE
Confidence 000357999998531 356788999999999 99999
Q ss_pred EE
Q 045407 274 VM 275 (382)
Q Consensus 274 Vf 275 (382)
++
T Consensus 181 ~~ 182 (249)
T 3g89_A 181 VA 182 (249)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 159
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=2.2e-12 Score=123.68 Aligned_cols=113 Identities=17% Similarity=0.218 Sum_probs=80.9
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc-ccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK-VGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k-l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
.|.+|||+|||+|.++.++++..+..+|++||+|++|++.|+++.... .++-...|+.++++|.+++..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~---------- 152 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN---------- 152 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-------------
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHh----------
Confidence 478999999999999999999865568999999999999999975321 011123589999999877641
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccCC
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSKK 269 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~p 269 (382)
....+||+|++-... -......| ..+|+.++++|+ |
T Consensus 153 ---------------------------------------~~~~~fDvIi~D~~~--p~~~~~~l~~~~f~~~~~~~Lk-p 190 (294)
T 3adn_A 153 ---------------------------------------QTSQTFDVIISDCTD--PIGPGESLFTSAFYEGCKRCLN-P 190 (294)
T ss_dssp ---------------------------------------CCCCCEEEEEECC------------CCHHHHHHHHHTEE-E
T ss_pred ---------------------------------------hcCCCccEEEECCCC--ccCcchhccHHHHHHHHHHhcC-C
Confidence 013579999993322 11222334 789999999999 9
Q ss_pred CcEEEEec
Q 045407 270 GGIFVMDL 277 (382)
Q Consensus 270 GGiFVfDl 277 (382)
||+|++-.
T Consensus 191 gG~lv~~~ 198 (294)
T 3adn_A 191 GGIFVAQN 198 (294)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEec
Confidence 99999965
No 160
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.32 E-value=3.2e-13 Score=121.63 Aligned_cols=116 Identities=12% Similarity=0.106 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCC-cceEEEeccC
Q 045407 98 ISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGY-SRISLFHGNV 176 (382)
Q Consensus 98 i~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~-~RI~l~~gDV 176 (382)
+.++...+.... .+.+|||+|||||.++..+++.| .+|+|+|+|+.||+.|+++... .+. .++.++++|+
T Consensus 66 ~~~l~~~~~~~~---~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~~~d~ 136 (241)
T 3gdh_A 66 AEHIAGRVSQSF---KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEV----YGIADKIEFICGDF 136 (241)
T ss_dssp HHHHHHHHHHHS---CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH----TTCGGGEEEEESCH
T ss_pred HHHHHHHhhhcc---CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHH----cCCCcCeEEEECCh
Confidence 455555544322 23579999999999999999998 5899999999999999998532 121 3799999998
Q ss_pred CCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHH
Q 045407 177 LQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLV 256 (382)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~ 256 (382)
.++. . ...||+|++. ..+.++... .
T Consensus 137 ~~~~-----------------~----------------------------------~~~~D~v~~~-~~~~~~~~~---~ 161 (241)
T 3gdh_A 137 LLLA-----------------S----------------------------------FLKADVVFLS-PPWGGPDYA---T 161 (241)
T ss_dssp HHHG-----------------G----------------------------------GCCCSEEEEC-CCCSSGGGG---G
T ss_pred HHhc-----------------c----------------------------------cCCCCEEEEC-CCcCCcchh---h
Confidence 6654 1 3579999965 355554433 2
Q ss_pred HHHHHHHhhccCCCcEEEEecc
Q 045407 257 LYFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 257 ~yFr~V~~~L~~pGGiFVfDl~ 278 (382)
..+..++++|+ |||++|++..
T Consensus 162 ~~~~~~~~~L~-pgG~~i~~~~ 182 (241)
T 3gdh_A 162 AETFDIRTMMS-PDGFEIFRLS 182 (241)
T ss_dssp SSSBCTTTSCS-SCHHHHHHHH
T ss_pred hHHHHHHhhcC-CcceeHHHHH
Confidence 35668889999 9999988763
No 161
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.32 E-value=4.9e-12 Score=108.35 Aligned_cols=111 Identities=12% Similarity=0.062 Sum_probs=78.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.+. .+|+|+|+|++|++.|+++... .+ -..++.++++|+.++...
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~-~~v~~vD~~~~~~~~a~~~~~~-~~--~~~~~~~~~~d~~~~~~~----------- 109 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGM-DKSICIEKNFAALKVIKENIAI-TK--EPEKFEVRKMDANRALEQ----------- 109 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHH-HT--CGGGEEEEESCHHHHHHH-----------
T ss_pred CCCEEEeCCccCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHH-hC--CCcceEEEECcHHHHHHH-----------
Confidence 45799999999999999998764 4899999999999999988532 11 113799999998664300
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHH--HhhccCCCc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHV--LHALSKKGG 271 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V--~~~L~~pGG 271 (382)
+.. ....||+|++.. .+. .... ...++.+ ++.|+ |||
T Consensus 110 --~~~---------------------------------~~~~fD~i~~~~-~~~-~~~~---~~~~~~l~~~~~L~-~gG 148 (187)
T 2fhp_A 110 --FYE---------------------------------EKLQFDLVLLDP-PYA-KQEI---VSQLEKMLERQLLT-NEA 148 (187)
T ss_dssp --HHH---------------------------------TTCCEEEEEECC-CGG-GCCH---HHHHHHHHHTTCEE-EEE
T ss_pred --HHh---------------------------------cCCCCCEEEECC-CCC-chhH---HHHHHHHHHhcccC-CCC
Confidence 000 135699999753 222 2233 3344444 88899 999
Q ss_pred EEEEeccCC
Q 045407 272 IFVMDLYGG 280 (382)
Q Consensus 272 iFVfDl~gg 280 (382)
+|++.....
T Consensus 149 ~l~~~~~~~ 157 (187)
T 2fhp_A 149 VIVCETDKT 157 (187)
T ss_dssp EEEEEEETT
T ss_pred EEEEEeCCc
Confidence 999987643
No 162
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.32 E-value=4.7e-12 Score=114.86 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=79.9
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||.++..+++. ++..+|+|+|+|++|++.|+++... .+. ..++.++++|+.++.
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~--~~~v~~~~~d~~~~~------------ 158 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKW-AGF--DDRVTIKLKDIYEGI------------ 158 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-HTC--TTTEEEECSCGGGCC------------
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHH-cCC--CCceEEEECchhhcc------------
Confidence 457999999999999999999 7677999999999999999998532 111 236999999986543
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
....||+|++- + .+...+++++++.|+ |||+
T Consensus 159 ---------------------------------------~~~~~D~v~~~------~---~~~~~~l~~~~~~L~-~gG~ 189 (255)
T 3mb5_A 159 ---------------------------------------EEENVDHVILD------L---PQPERVVEHAAKALK-PGGF 189 (255)
T ss_dssp ---------------------------------------CCCSEEEEEEC------S---SCGGGGHHHHHHHEE-EEEE
T ss_pred ---------------------------------------CCCCcCEEEEC------C---CCHHHHHHHHHHHcC-CCCE
Confidence 13569999872 1 233567999999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
+++-..
T Consensus 190 l~~~~~ 195 (255)
T 3mb5_A 190 FVAYTP 195 (255)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 998553
No 163
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.32 E-value=1.8e-12 Score=121.78 Aligned_cols=99 Identities=14% Similarity=0.060 Sum_probs=78.2
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++..+++.|.. +|+|+|+|+.|+++|+++... .+- ..++.++++|+.++.
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~-n~~--~~~v~~~~~D~~~~~-------------- 188 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHL-NKV--EDRMSAYNMDNRDFP-------------- 188 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHH-TTC--TTTEEEECSCTTTCC--------------
T ss_pred CEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHH-cCC--CceEEEEECCHHHhc--------------
Confidence 47999999999999999999975 799999999999999998532 111 136999999998776
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
. ...||+|++- .. .....+++.++++|+ |||+|+
T Consensus 189 ---~----------------------------------~~~fD~Vi~~-----~p---~~~~~~l~~~~~~Lk-pgG~l~ 222 (278)
T 2frn_A 189 ---G----------------------------------ENIADRILMG-----YV---VRTHEFIPKALSIAK-DGAIIH 222 (278)
T ss_dssp ---C----------------------------------CSCEEEEEEC-----CC---SSGGGGHHHHHHHEE-EEEEEE
T ss_pred ---c----------------------------------cCCccEEEEC-----Cc---hhHHHHHHHHHHHCC-CCeEEE
Confidence 1 3569999872 11 122567889999999 999999
Q ss_pred Eec
Q 045407 275 MDL 277 (382)
Q Consensus 275 fDl 277 (382)
+-.
T Consensus 223 ~~~ 225 (278)
T 2frn_A 223 YHN 225 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 843
No 164
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.32 E-value=6.6e-12 Score=112.26 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=79.1
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++. |+..+|+|+|+|+.|++.++++... ..++.++++|+.++..
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~------~~~v~~~~~d~~~~~~----------- 136 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE------RRNIVPILGDATKPEE----------- 136 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS------CTTEEEEECCTTCGGG-----------
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc------cCCCEEEEccCCCcch-----------
Confidence 347999999999999999987 5556899999999999999988532 1479999999987541
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+. .+ ...||+|++-.. .......+++++++.|+ |||+
T Consensus 137 -----~~------------------------------~~-~~~~D~v~~~~~------~~~~~~~~l~~~~~~Lk-pgG~ 173 (227)
T 1g8a_A 137 -----YR------------------------------AL-VPKVDVIFEDVA------QPTQAKILIDNAEVYLK-RGGY 173 (227)
T ss_dssp -----GT------------------------------TT-CCCEEEEEECCC------STTHHHHHHHHHHHHEE-EEEE
T ss_pred -----hh------------------------------cc-cCCceEEEECCC------CHhHHHHHHHHHHHhcC-CCCE
Confidence 00 00 246999996432 33444566999999999 9999
Q ss_pred EEEe
Q 045407 273 FVMD 276 (382)
Q Consensus 273 FVfD 276 (382)
|++-
T Consensus 174 l~~~ 177 (227)
T 1g8a_A 174 GMIA 177 (227)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 165
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.32 E-value=3.8e-12 Score=116.36 Aligned_cols=107 Identities=12% Similarity=0.134 Sum_probs=80.6
Q ss_pred HHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 101 LQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 101 l~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+...+..+.. ..+.+|||+|||||.++..+++..+..+|+|+|+|+.|++.|+++. .++.++++|+.+++
T Consensus 74 ~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~ 143 (269)
T 1p91_A 74 IVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRLP 143 (269)
T ss_dssp HHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSCS
T ss_pred HHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhCC
Confidence 3444444332 2245799999999999999999843458999999999999999874 25789999987655
Q ss_pred hhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHH
Q 045407 181 EAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFK 260 (382)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr 260 (382)
+ ...+||+|++... ...++
T Consensus 144 -----------------~---------------------------------~~~~fD~v~~~~~-----------~~~l~ 162 (269)
T 1p91_A 144 -----------------F---------------------------------SDTSMDAIIRIYA-----------PCKAE 162 (269)
T ss_dssp -----------------B---------------------------------CTTCEEEEEEESC-----------CCCHH
T ss_pred -----------------C---------------------------------CCCceeEEEEeCC-----------hhhHH
Confidence 1 2457999998542 12478
Q ss_pred HHHhhccCCCcEEEEeccC
Q 045407 261 HVLHALSKKGGIFVMDLYG 279 (382)
Q Consensus 261 ~V~~~L~~pGGiFVfDl~g 279 (382)
.+++.|+ |||+|++-..+
T Consensus 163 ~~~~~L~-pgG~l~~~~~~ 180 (269)
T 1p91_A 163 ELARVVK-PGGWVITATPG 180 (269)
T ss_dssp HHHHHEE-EEEEEEEEEEC
T ss_pred HHHHhcC-CCcEEEEEEcC
Confidence 9999999 99999985544
No 166
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=4.5e-12 Score=114.42 Aligned_cols=102 Identities=14% Similarity=0.026 Sum_probs=79.8
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++. ++..+|+|+|+|++|++.|+++.....+ ..++.++++|+.+.+
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~------------ 161 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEAE------------ 161 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGCC------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhcC------------
Confidence 457999999999999999998 6667899999999999999998532101 247999999986653
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+....||+|++- +. +...++++++++|+ |||+
T Consensus 162 --------------------------------------~~~~~~D~v~~~------~~---~~~~~l~~~~~~L~-~gG~ 193 (258)
T 2pwy_A 162 --------------------------------------LEEAAYDGVALD------LM---EPWKVLEKAALALK-PDRF 193 (258)
T ss_dssp --------------------------------------CCTTCEEEEEEE------SS---CGGGGHHHHHHHEE-EEEE
T ss_pred --------------------------------------CCCCCcCEEEEC------Cc---CHHHHHHHHHHhCC-CCCE
Confidence 113569999972 22 33478999999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
+++-..
T Consensus 194 l~~~~~ 199 (258)
T 2pwy_A 194 LVAYLP 199 (258)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 998553
No 167
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.31 E-value=9.6e-13 Score=121.53 Aligned_cols=121 Identities=13% Similarity=0.124 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEecc
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGN 175 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gD 175 (382)
...++..+... . .|.+|||+|||||..+..||+.-+ ..+|+|||+|++|++.|+++... .+- ..+|.++++|
T Consensus 48 ~~~~l~~l~~~-~---~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~--~~~i~~~~gd 120 (242)
T 3r3h_A 48 QAQFMQMLIRL-T---RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWRE-AKQ--EHKIKLRLGP 120 (242)
T ss_dssp HHHHHHHHHHH-H---TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHH-TTC--TTTEEEEESC
T ss_pred HHHHHHHHHhh-c---CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEEcC
Confidence 33555555443 2 255799999999999999998643 56899999999999999987532 111 2489999999
Q ss_pred CCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH
Q 045407 176 VLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL 255 (382)
Q Consensus 176 V~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL 255 (382)
+.+.... +. .. ...++||+|++-.. ....
T Consensus 121 a~~~l~~---------------~~---------------~~--------------~~~~~fD~V~~d~~-------~~~~ 149 (242)
T 3r3h_A 121 ALDTLHS---------------LL---------------NE--------------GGEHQFDFIFIDAD-------KTNY 149 (242)
T ss_dssp HHHHHHH---------------HH---------------HH--------------HCSSCEEEEEEESC-------GGGH
T ss_pred HHHHHHH---------------Hh---------------hc--------------cCCCCEeEEEEcCC-------hHHh
Confidence 8664310 00 00 00257999987542 3567
Q ss_pred HHHHHHHHhhccCCCcEEEEe
Q 045407 256 VLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 256 ~~yFr~V~~~L~~pGGiFVfD 276 (382)
..+|+.+++.|+ |||++|+|
T Consensus 150 ~~~l~~~~~~Lk-pGG~lv~d 169 (242)
T 3r3h_A 150 LNYYELALKLVT-PKGLIAID 169 (242)
T ss_dssp HHHHHHHHHHEE-EEEEEEEE
T ss_pred HHHHHHHHHhcC-CCeEEEEE
Confidence 889999999999 99999996
No 168
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.31 E-value=3.6e-12 Score=117.32 Aligned_cols=114 Identities=16% Similarity=0.132 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHh----CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRS----DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF 172 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~----g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~ 172 (382)
....+..++... . +.+|||+|||||.++..|++. ++..+|+|||+|++||+.|+.. ..+|.++
T Consensus 69 ~~~~l~~~l~~~-~---~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---------~~~v~~~ 135 (236)
T 2bm8_A 69 TQAVYHDMLWEL-R---PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---------MENITLH 135 (236)
T ss_dssp HHHHHHHHHHHH-C---CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---------CTTEEEE
T ss_pred HHHHHHHHHHhc-C---CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---------CCceEEE
Confidence 345555555432 2 457999999999999999997 5667999999999999877621 1479999
Q ss_pred eccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh
Q 045407 173 HGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR 252 (382)
Q Consensus 173 ~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r 252 (382)
++|+.++.. +.. +...+||+|++... |
T Consensus 136 ~gD~~~~~~--------------l~~--------------------------------~~~~~fD~I~~d~~-----~-- 162 (236)
T 2bm8_A 136 QGDCSDLTT--------------FEH--------------------------------LREMAHPLIFIDNA-----H-- 162 (236)
T ss_dssp ECCSSCSGG--------------GGG--------------------------------GSSSCSSEEEEESS-----C--
T ss_pred ECcchhHHH--------------HHh--------------------------------hccCCCCEEEECCc-----h--
Confidence 999987520 000 00236999987432 2
Q ss_pred hHHHHHHHHHHh-hccCCCcEEEEec
Q 045407 253 ADLVLYFKHVLH-ALSKKGGIFVMDL 277 (382)
Q Consensus 253 ~dL~~yFr~V~~-~L~~pGGiFVfDl 277 (382)
.++..+|+.+++ .|+ |||+||++.
T Consensus 163 ~~~~~~l~~~~r~~Lk-pGG~lv~~d 187 (236)
T 2bm8_A 163 ANTFNIMKWAVDHLLE-EGDYFIIED 187 (236)
T ss_dssp SSHHHHHHHHHHHTCC-TTCEEEECS
T ss_pred HhHHHHHHHHHHhhCC-CCCEEEEEe
Confidence 267789999997 999 999999953
No 169
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.31 E-value=8.5e-12 Score=135.76 Aligned_cols=110 Identities=18% Similarity=0.207 Sum_probs=86.1
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhcccccc--CCCCcceEEEeccCCCchhhhhcccchh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVG--ADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~--~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
+.+|||+|||||.++..|++.+ +..+|+|||+|+.||++|+++....+. ..+..+|.|+++|+.+++.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--------- 792 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS--------- 792 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT---------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc---------
Confidence 4579999999999999999998 445899999999999999985322111 1133589999999988761
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
....||+|++. .++.|+.+ ..+..+++.+++.|+ ||
T Consensus 793 -----------------------------------------~d~sFDlVV~~-eVLeHL~d-p~l~~~L~eI~RvLK-PG 828 (950)
T 3htx_A 793 -----------------------------------------RLHDVDIGTCL-EVIEHMEE-DQACEFGEKVLSLFH-PK 828 (950)
T ss_dssp -----------------------------------------TSCSCCEEEEE-SCGGGSCH-HHHHHHHHHHHHTTC-CS
T ss_pred -----------------------------------------ccCCeeEEEEe-CchhhCCh-HHHHHHHHHHHHHcC-CC
Confidence 24679999995 57888765 566789999999999 89
Q ss_pred cEEEEec
Q 045407 271 GIFVMDL 277 (382)
Q Consensus 271 GiFVfDl 277 (382)
++|+..
T Consensus 829 -~LIIST 834 (950)
T 3htx_A 829 -LLIVST 834 (950)
T ss_dssp -EEEEEE
T ss_pred -EEEEEe
Confidence 555543
No 170
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.30 E-value=1.1e-11 Score=110.53 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=76.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.+ .+|+|+|+|+.|++.|+++... .+ ++.++++|+.+..
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~----~~--~v~~~~~d~~~~~------------- 129 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSY----YN--NIKLILGDGTLGY------------- 129 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTT----CS--SEEEEESCGGGCC-------------
T ss_pred CCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhh----cC--CeEEEECCccccc-------------
Confidence 4579999999999999999998 5899999999999999998522 11 7999999986522
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
. ...+||+|++.. .+.++. ..+++.|+ |||++
T Consensus 130 ----~---------------------------------~~~~fD~v~~~~-~~~~~~---------~~~~~~L~-pgG~l 161 (231)
T 1vbf_A 130 ----E---------------------------------EEKPYDRVVVWA-TAPTLL---------CKPYEQLK-EGGIM 161 (231)
T ss_dssp ----G---------------------------------GGCCEEEEEESS-BBSSCC---------HHHHHTEE-EEEEE
T ss_pred ----c---------------------------------cCCCccEEEECC-cHHHHH---------HHHHHHcC-CCcEE
Confidence 0 035699999875 444443 35788999 99999
Q ss_pred EEeccC
Q 045407 274 VMDLYG 279 (382)
Q Consensus 274 VfDl~g 279 (382)
|+.+..
T Consensus 162 ~~~~~~ 167 (231)
T 1vbf_A 162 ILPIGV 167 (231)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 998753
No 171
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.30 E-value=6e-12 Score=120.24 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=76.9
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccc--------cccCCCCcceEEEeccCCCchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLN--------KVGADGYSRISLFHGNVLQPLEAKL 184 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~--------kl~~d~~~RI~l~~gDV~~~~~~~~ 184 (382)
..+|||+|||+|.++..+++. |+..+|+|+|+|++|++.|+++... .+. ....+|.++++|+.+...
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~-~~~~~v~~~~~d~~~~~~--- 181 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVE-EWPDNVDFIHKDISGATE--- 181 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSS-CCCCCEEEEESCTTCCC----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccccc-ccCCceEEEECChHHccc---
Confidence 457999999999999999998 7767999999999999999997532 000 012479999999977530
Q ss_pred cccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHh
Q 045407 185 VRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLH 264 (382)
Q Consensus 185 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~ 264 (382)
.+....||+|++-.- .. ...++++++
T Consensus 182 ---------------------------------------------~~~~~~fD~V~~~~~------~~---~~~l~~~~~ 207 (336)
T 2b25_A 182 ---------------------------------------------DIKSLTFDAVALDML------NP---HVTLPVFYP 207 (336)
T ss_dssp ---------------------------------------------------EEEEEECSS------ST---TTTHHHHGG
T ss_pred ---------------------------------------------ccCCCCeeEEEECCC------CH---HHHHHHHHH
Confidence 011346999997321 11 227899999
Q ss_pred hccCCCcEEEEecc
Q 045407 265 ALSKKGGIFVMDLY 278 (382)
Q Consensus 265 ~L~~pGGiFVfDl~ 278 (382)
.|+ |||+|++-..
T Consensus 208 ~Lk-pgG~lv~~~~ 220 (336)
T 2b25_A 208 HLK-HGGVCAVYVV 220 (336)
T ss_dssp GEE-EEEEEEEEES
T ss_pred hcC-CCcEEEEEeC
Confidence 999 9999997544
No 172
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.30 E-value=2.6e-12 Score=113.82 Aligned_cols=102 Identities=18% Similarity=0.066 Sum_probs=78.9
Q ss_pred CCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||||..+..+++.-+ ..+|+|||+|+.|++.|+++... .+- ..+|.++++|+.+...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~v~~~~~d~~~~~~----------- 122 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD-NGL--IDRVELQVGDPLGIAA----------- 122 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HSG--GGGEEEEESCHHHHHT-----------
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCC--CceEEEEEecHHHHhc-----------
Confidence 45799999999999999998744 46899999999999999987532 111 1379999999765320
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
. + .. ||+|++-.. ..+...+|+.+++.|+ |||+
T Consensus 123 -----~--------------------------------~-~~-fD~v~~~~~-------~~~~~~~l~~~~~~Lk-pgG~ 155 (210)
T 3c3p_A 123 -----G--------------------------------Q-RD-IDILFMDCD-------VFNGADVLERMNRCLA-KNAL 155 (210)
T ss_dssp -----T--------------------------------C-CS-EEEEEEETT-------TSCHHHHHHHHGGGEE-EEEE
T ss_pred -----c--------------------------------C-CC-CCEEEEcCC-------hhhhHHHHHHHHHhcC-CCeE
Confidence 0 0 24 999987532 2456789999999999 9999
Q ss_pred EEEe
Q 045407 273 FVMD 276 (382)
Q Consensus 273 FVfD 276 (382)
+|+|
T Consensus 156 lv~~ 159 (210)
T 3c3p_A 156 LIAV 159 (210)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 173
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.30 E-value=8.1e-12 Score=115.67 Aligned_cols=109 Identities=16% Similarity=0.149 Sum_probs=80.9
Q ss_pred CCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
|.+|||+|||||..+..+++.-+ ..+|+|+|+|++|++.|+++... .+ -..+|.++++|..+...
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~-~g--~~~~i~~~~gda~~~l~----------- 145 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK-AG--VDHKIDFREGPALPVLD----------- 145 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH-TT--CGGGEEEEESCHHHHHH-----------
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cC--CCCCeEEEECCHHHHHH-----------
Confidence 56899999999999999999843 46899999999999999997532 11 12479999999865420
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
. +.. .++...+||+|++-.. ......+|+.+++.|+ |||+
T Consensus 146 --~--l~~----------------------------~~~~~~~fD~V~~d~~-------~~~~~~~l~~~~~~Lk-pGG~ 185 (247)
T 1sui_A 146 --E--MIK----------------------------DEKNHGSYDFIFVDAD-------KDNYLNYHKRLIDLVK-VGGV 185 (247)
T ss_dssp --H--HHH----------------------------SGGGTTCBSEEEECSC-------STTHHHHHHHHHHHBC-TTCC
T ss_pred --H--HHh----------------------------ccCCCCCEEEEEEcCc-------hHHHHHHHHHHHHhCC-CCeE
Confidence 0 000 0000256999987532 2456889999999999 9999
Q ss_pred EEEe
Q 045407 273 FVMD 276 (382)
Q Consensus 273 FVfD 276 (382)
+|+|
T Consensus 186 lv~d 189 (247)
T 1sui_A 186 IGYD 189 (247)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9997
No 174
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.29 E-value=4.3e-12 Score=131.01 Aligned_cols=110 Identities=15% Similarity=0.184 Sum_probs=83.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
|++|||+|||+|.+|..||++|. +|+|||+|+.||+.|+.++.. .+...|.+.++++.++..
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~----~~~~~~~~~~~~~~~~~~------------ 128 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEE----NPDFAAEFRVGRIEEVIA------------ 128 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHT----STTSEEEEEECCHHHHHH------------
T ss_pred CCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHh----cCCCceEEEECCHHHHhh------------
Confidence 78899999999999999999995 799999999999999998643 233579999999876531
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
. +...+||+|+|+. .+-|+.+...+. ....+...|++.+-.|
T Consensus 129 ----~--------------------------------~~~~~fD~v~~~e-~~ehv~~~~~~~-~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 129 ----A--------------------------------LEEGEFDLAIGLS-VFHHIVHLHGID-EVKRLLSRLADVTQAV 170 (569)
T ss_dssp ----H--------------------------------CCTTSCSEEEEES-CHHHHHHHHCHH-HHHHHHHHHHHHSSEE
T ss_pred ----h--------------------------------ccCCCccEEEECc-chhcCCCHHHHH-HHHHHHHHhcccccee
Confidence 0 1146799999986 777777654433 3445777788444567
Q ss_pred EEeccC
Q 045407 274 VMDLYG 279 (382)
Q Consensus 274 VfDl~g 279 (382)
++-+.+
T Consensus 171 ~~~~~~ 176 (569)
T 4azs_A 171 ILELAV 176 (569)
T ss_dssp EEECCC
T ss_pred eEEecc
Confidence 777654
No 175
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.29 E-value=5.7e-12 Score=118.96 Aligned_cols=114 Identities=18% Similarity=0.160 Sum_probs=82.8
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc-CCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG-ADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~-~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
.|.+|||+|||+|.++.++++..+..+|++||+|++|+++|+++... +. .-...|+.++++|.++...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~-~~~~~~~~rv~v~~~D~~~~l~---------- 143 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPS-IAGKLDDPRVDVQVDDGFMHIA---------- 143 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHH-HHTTTTSTTEEEEESCSHHHHH----------
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHh-hccccCCCceEEEECcHHHHHh----------
Confidence 47789999999999999999884446899999999999999997421 10 1123589999999865430
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhH--HHHHHHHHHhhccCC
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD--LVLYFKHVLHALSKK 269 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~d--L~~yFr~V~~~L~~p 269 (382)
. ...+||+|++-. ......... ...+|+.++++|+ |
T Consensus 144 ------~---------------------------------~~~~fD~Ii~d~--~~~~~~~~~l~~~~~~~~~~~~L~-p 181 (275)
T 1iy9_A 144 ------K---------------------------------SENQYDVIMVDS--TEPVGPAVNLFTKGFYAGIAKALK-E 181 (275)
T ss_dssp ------T---------------------------------CCSCEEEEEESC--SSCCSCCCCCSTTHHHHHHHHHEE-E
T ss_pred ------h---------------------------------CCCCeeEEEECC--CCCCCcchhhhHHHHHHHHHHhcC-C
Confidence 0 135699999843 222111111 2578999999999 9
Q ss_pred CcEEEEeccC
Q 045407 270 GGIFVMDLYG 279 (382)
Q Consensus 270 GGiFVfDl~g 279 (382)
||+||+....
T Consensus 182 gG~lv~~~~~ 191 (275)
T 1iy9_A 182 DGIFVAQTDN 191 (275)
T ss_dssp EEEEEEECCC
T ss_pred CcEEEEEcCC
Confidence 9999998643
No 176
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=9e-12 Score=110.01 Aligned_cols=102 Identities=15% Similarity=0.090 Sum_probs=78.1
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++.+ +..+|+|+|+|+.|++.|+++... . +..++.++++|+..+.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~---~~~~v~~~~~d~~~~~------------ 141 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK-L---GYDNVIVIVGDGTLGY------------ 141 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-H---TCTTEEEEESCGGGCC------------
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-c---CCCCeEEEECCcccCC------------
Confidence 4579999999999999999987 446899999999999999987532 1 2236899999974332
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
. ...+||+|++.. ++.++. ..+++.|+ |||+
T Consensus 142 -----~---------------------------------~~~~fD~v~~~~-~~~~~~---------~~~~~~L~-pgG~ 172 (215)
T 2yxe_A 142 -----E---------------------------------PLAPYDRIYTTA-AGPKIP---------EPLIRQLK-DGGK 172 (215)
T ss_dssp -----G---------------------------------GGCCEEEEEESS-BBSSCC---------HHHHHTEE-EEEE
T ss_pred -----C---------------------------------CCCCeeEEEECC-chHHHH---------HHHHHHcC-CCcE
Confidence 0 035699999875 444443 37889999 9999
Q ss_pred EEEeccCC
Q 045407 273 FVMDLYGG 280 (382)
Q Consensus 273 FVfDl~gg 280 (382)
+|+-+..+
T Consensus 173 lv~~~~~~ 180 (215)
T 2yxe_A 173 LLMPVGRY 180 (215)
T ss_dssp EEEEESSS
T ss_pred EEEEECCC
Confidence 99987644
No 177
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.29 E-value=3e-12 Score=125.04 Aligned_cols=114 Identities=16% Similarity=0.095 Sum_probs=83.9
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc-CCCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG-ADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~-~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..|.+|||+|||+|.++.++++..+..+|+|||+|+.|++.|+++... +. .-...+|.++++|+.++..
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~-~~~gl~~~rv~~~~~D~~~~l~--------- 188 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPD-VAIGYEDPRVNLVIGDGVAFLK--------- 188 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHH-HHGGGGSTTEEEEESCHHHHHH---------
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh-hccccCCCcEEEEECCHHHHHH---------
Confidence 347789999999999999999986556899999999999999997532 10 0012489999999865430
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhH--HHHHHHHHHhhccC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD--LVLYFKHVLHALSK 268 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~d--L~~yFr~V~~~L~~ 268 (382)
. +...+||+|++-.. ..++.... ...+|+.++++|+
T Consensus 189 -------~--------------------------------~~~~~fDlIi~d~~--~p~~~~~~l~~~~~l~~~~~~Lk- 226 (334)
T 1xj5_A 189 -------N--------------------------------AAEGSYDAVIVDSS--DPIGPAKELFEKPFFQSVARALR- 226 (334)
T ss_dssp -------T--------------------------------SCTTCEEEEEECCC--CTTSGGGGGGSHHHHHHHHHHEE-
T ss_pred -------h--------------------------------ccCCCccEEEECCC--CccCcchhhhHHHHHHHHHHhcC-
Confidence 0 11357999998432 12222222 3789999999999
Q ss_pred CCcEEEEec
Q 045407 269 KGGIFVMDL 277 (382)
Q Consensus 269 pGGiFVfDl 277 (382)
|||+||++.
T Consensus 227 pgG~lv~~~ 235 (334)
T 1xj5_A 227 PGGVVCTQA 235 (334)
T ss_dssp EEEEEEEEC
T ss_pred CCcEEEEec
Confidence 999999974
No 178
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.28 E-value=7.9e-12 Score=111.40 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=87.2
Q ss_pred hhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEe
Q 045407 95 KGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFH 173 (382)
Q Consensus 95 ~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~ 173 (382)
.....++..+... . .+.+|||+|||||.++..+++..+ ..+|+|+|+|++|++.|+++... .+. ..+|.+++
T Consensus 55 ~~~~~~l~~l~~~-~---~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~--~~~i~~~~ 127 (229)
T 2avd_A 55 CEQAQLLANLARL-I---QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQ-AEA--EHKIDLRL 127 (229)
T ss_dssp HHHHHHHHHHHHH-T---TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHH-TTC--TTTEEEEE
T ss_pred HHHHHHHHHHHHh-c---CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCC--CCeEEEEE
Confidence 3344566555543 2 245799999999999999998743 46899999999999999987532 111 14799999
Q ss_pred ccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh
Q 045407 174 GNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA 253 (382)
Q Consensus 174 gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~ 253 (382)
+|+.+... . +. .. -...+||+|++-.. ..
T Consensus 128 ~d~~~~~~-------------~--~~----------------~~-------------~~~~~~D~v~~d~~-------~~ 156 (229)
T 2avd_A 128 KPALETLD-------------E--LL----------------AA-------------GEAGTFDVAVVDAD-------KE 156 (229)
T ss_dssp SCHHHHHH-------------H--HH----------------HT-------------TCTTCEEEEEECSC-------ST
T ss_pred cCHHHHHH-------------H--HH----------------hc-------------CCCCCccEEEECCC-------HH
Confidence 99854320 0 00 00 00157999998432 34
Q ss_pred HHHHHHHHHHhhccCCCcEEEEe
Q 045407 254 DLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 254 dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
....+|+.+.+.|+ |||++|+|
T Consensus 157 ~~~~~l~~~~~~L~-pgG~lv~~ 178 (229)
T 2avd_A 157 NCSAYYERCLQLLR-PGGILAVL 178 (229)
T ss_dssp THHHHHHHHHHHEE-EEEEEEEE
T ss_pred HHHHHHHHHHHHcC-CCeEEEEE
Confidence 56789999999999 99999996
No 179
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.28 E-value=7.8e-12 Score=114.29 Aligned_cols=112 Identities=13% Similarity=0.200 Sum_probs=77.8
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc--ccCC--CCcceEEEeccCCCchhhhhcccchh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK--VGAD--GYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k--l~~d--~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..|||+|||||.++..+++.++...|+|||+|+.||+.|+++.... .... +..++.++++|+.+... .
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~-~------- 122 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP-N------- 122 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG-G-------
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH-H-------
Confidence 4689999999999999999998778999999999999999874320 0000 22479999999976320 0
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhH-----HHHHHHHHHhh
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD-----LVLYFKHVLHA 265 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~d-----L~~yFr~V~~~ 265 (382)
. +....+|.|+..+ +--++..+.. ...+++.+.+.
T Consensus 123 -------~--------------------------------~~~~~~d~v~~~~-p~p~~k~~~~~~r~~~~~~l~~~~~~ 162 (246)
T 2vdv_E 123 -------F--------------------------------FEKGQLSKMFFCF-PDPHFKQRKHKARIITNTLLSEYAYV 162 (246)
T ss_dssp -------T--------------------------------SCTTCEEEEEEES-CCCC------CSSCCCHHHHHHHHHH
T ss_pred -------h--------------------------------ccccccCEEEEEC-CCcccccchhHHhhccHHHHHHHHHH
Confidence 0 2245678776442 2222222111 14789999999
Q ss_pred ccCCCcEEEE
Q 045407 266 LSKKGGIFVM 275 (382)
Q Consensus 266 L~~pGGiFVf 275 (382)
|+ |||+|++
T Consensus 163 Lk-pgG~l~~ 171 (246)
T 2vdv_E 163 LK-EGGVVYT 171 (246)
T ss_dssp EE-EEEEEEE
T ss_pred cC-CCCEEEE
Confidence 99 9999998
No 180
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.28 E-value=3.4e-12 Score=120.47 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=80.7
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCC--------CCcceEEEeccCCCchhhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGAD--------GYSRISLFHGNVLQPLEAKL 184 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d--------~~~RI~l~~gDV~~~~~~~~ 184 (382)
.|.+|||+|||+|.++.++++. +..+|+|||+|++|+++|+++. . +... ...++.++++|+++...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~-~~~~l~~~~~~~~~~~v~~~~~D~~~~l~--- 148 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-K-IDNGLLEAMLNGKHEKAKLTIGDGFEFIK--- 148 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-C-TTTTHHHHHHTTCCSSEEEEESCHHHHHH---
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-h-hccccccccccCCCCcEEEEECchHHHhc---
Confidence 4678999999999999999998 4468999999999999999985 2 2100 12589999999865430
Q ss_pred cccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHH
Q 045407 185 VRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHV 262 (382)
Q Consensus 185 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V 262 (382)
. ..+||+|++-.. ..+.....+ ..+|+.+
T Consensus 149 ----------------------------------------------~-~~~fD~Ii~d~~--~~~~~~~~l~~~~~l~~~ 179 (281)
T 1mjf_A 149 ----------------------------------------------N-NRGFDVIIADST--DPVGPAKVLFSEEFYRYV 179 (281)
T ss_dssp ----------------------------------------------H-CCCEEEEEEECC--CCC-----TTSHHHHHHH
T ss_pred ----------------------------------------------c-cCCeeEEEECCC--CCCCcchhhhHHHHHHHH
Confidence 0 246999997432 222222343 7889999
Q ss_pred HhhccCCCcEEEEec
Q 045407 263 LHALSKKGGIFVMDL 277 (382)
Q Consensus 263 ~~~L~~pGGiFVfDl 277 (382)
+++|+ |||+|++..
T Consensus 180 ~~~L~-pgG~lv~~~ 193 (281)
T 1mjf_A 180 YDALN-NPGIYVTQA 193 (281)
T ss_dssp HHHEE-EEEEEEEEE
T ss_pred HHhcC-CCcEEEEEc
Confidence 99999 999999975
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.28 E-value=1.1e-11 Score=111.48 Aligned_cols=116 Identities=20% Similarity=0.213 Sum_probs=86.0
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
.++..++... . +.+|||+|||+|.++..+++..+..+|+|+|+|+++++.|+++... .+. ..+|.++++|+.+
T Consensus 44 ~~l~~~~~~~-~---~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 44 ESLLHLLKMA-A---PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKA-LGL--ESRIELLFGDALQ 116 (233)
T ss_dssp HHHHHHHHHH-C---CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-TTC--TTTEEEECSCGGG
T ss_pred HHHHHHHhcc-C---CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEECCHHH
Confidence 5555555432 2 3479999999999999999996657899999999999999998532 111 1379999999876
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHH
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLY 258 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~y 258 (382)
.... + ....+||+|++... + .+...+
T Consensus 117 ~~~~---------------~--------------------------------~~~~~fD~I~~~~~-~------~~~~~~ 142 (233)
T 2gpy_A 117 LGEK---------------L--------------------------------ELYPLFDVLFIDAA-K------GQYRRF 142 (233)
T ss_dssp SHHH---------------H--------------------------------TTSCCEEEEEEEGG-G------SCHHHH
T ss_pred HHHh---------------c--------------------------------ccCCCccEEEECCC-H------HHHHHH
Confidence 4200 0 00256999987432 1 367889
Q ss_pred HHHHHhhccCCCcEEEEe
Q 045407 259 FKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfD 276 (382)
|+.+++.|+ |||++|++
T Consensus 143 l~~~~~~L~-pgG~lv~~ 159 (233)
T 2gpy_A 143 FDMYSPMVR-PGGLILSD 159 (233)
T ss_dssp HHHHGGGEE-EEEEEEEE
T ss_pred HHHHHHHcC-CCeEEEEE
Confidence 999999999 99999996
No 182
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.27 E-value=2.5e-11 Score=117.21 Aligned_cols=109 Identities=19% Similarity=0.224 Sum_probs=81.1
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
...|||+|||||.++++++..+ +..+|+|+|+|+.|++.|+++... .+..+|.++++|+.+++.
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~----~g~~~i~~~~~D~~~~~~----------- 268 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA----SGLSWIRFLRADARHLPR----------- 268 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH----TTCTTCEEEECCGGGGGG-----------
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH----cCCCceEEEeCChhhCcc-----------
Confidence 4579999999999999999987 666899999999999999998633 222379999999987661
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcc-cCChhH----HHHHHHHHHhhcc
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCC-LHKRAD----LVLYFKHVLHALS 267 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~y-L~~r~d----L~~yFr~V~~~L~ 267 (382)
..+.||+|++-- .|+. +.+..+ ....++.+.+.|+
T Consensus 269 ---------------------------------------~~~~~D~Ii~np-Pyg~r~~~~~~~~~~~~~~~~~~~~~Lk 308 (354)
T 3tma_A 269 ---------------------------------------FFPEVDRILANP-PHGLRLGRKEGLFHLYWDFLRGALALLP 308 (354)
T ss_dssp ---------------------------------------TCCCCSEEEECC-CSCC----CHHHHHHHHHHHHHHHHTSC
T ss_pred ---------------------------------------ccCCCCEEEECC-CCcCccCCcccHHHHHHHHHHHHHHhcC
Confidence 134589988721 2221 111122 3678889999999
Q ss_pred CCCcEEEEecc
Q 045407 268 KKGGIFVMDLY 278 (382)
Q Consensus 268 ~pGGiFVfDl~ 278 (382)
|||.+++=..
T Consensus 309 -pgG~l~i~t~ 318 (354)
T 3tma_A 309 -PGGRVALLTL 318 (354)
T ss_dssp -TTCEEEEEES
T ss_pred -CCcEEEEEeC
Confidence 9999999543
No 183
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.27 E-value=1.1e-11 Score=112.66 Aligned_cols=124 Identities=21% Similarity=0.240 Sum_probs=87.4
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE
Q 045407 94 PKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF 172 (382)
Q Consensus 94 p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~ 172 (382)
.+....++..+.... . +.+|||+|||+|..+..|++.-+ ..+|+|+|+|+++++.|+++... .+- ..+|.++
T Consensus 57 ~~~~~~~l~~l~~~~-~---~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~--~~~i~~~ 129 (232)
T 3cbg_A 57 SPEQAQFLGLLISLT-G---AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQK-AGV--AEKISLR 129 (232)
T ss_dssp CHHHHHHHHHHHHHH-T---CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTC--GGGEEEE
T ss_pred CHHHHHHHHHHHHhc-C---CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEE
Confidence 344445665555432 2 45799999999999999998744 46899999999999999987432 111 1479999
Q ss_pred eccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh
Q 045407 173 HGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR 252 (382)
Q Consensus 173 ~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r 252 (382)
++|+.+... .+.. . + ..++||+|++... .
T Consensus 130 ~~d~~~~l~-------------~l~~------------------~------------~-~~~~fD~V~~d~~-------~ 158 (232)
T 3cbg_A 130 LGPALATLE-------------QLTQ------------------G------------K-PLPEFDLIFIDAD-------K 158 (232)
T ss_dssp ESCHHHHHH-------------HHHT------------------S------------S-SCCCEEEEEECSC-------G
T ss_pred EcCHHHHHH-------------HHHh------------------c------------C-CCCCcCEEEECCC-------H
Confidence 999754320 0000 0 0 0157999987543 3
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEe
Q 045407 253 ADLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 253 ~dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
.....+|+.+++.|+ |||++|+|
T Consensus 159 ~~~~~~l~~~~~~Lk-pgG~lv~~ 181 (232)
T 3cbg_A 159 RNYPRYYEIGLNLLR-RGGLMVID 181 (232)
T ss_dssp GGHHHHHHHHHHTEE-EEEEEEEE
T ss_pred HHHHHHHHHHHHHcC-CCeEEEEe
Confidence 567889999999999 99999997
No 184
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.26 E-value=4.7e-12 Score=119.81 Aligned_cols=114 Identities=17% Similarity=0.121 Sum_probs=85.7
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC-CCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA-DGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~-d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..|.+|||+|||+|.++.++++..+..+|++||+|+.|+++|+++... ++. -...|+.++++|+++...
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~-~~~~~~~~~v~~~~~D~~~~l~--------- 146 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKN-ISCGYEDKRVNVFIEDASKFLE--------- 146 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTT-TSGGGGSTTEEEEESCHHHHHH---------
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHH-hccccCCCcEEEEECChHHHHH---------
Confidence 347789999999999999999986667899999999999999997522 110 012589999999865430
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSK 268 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~ 268 (382)
. ...+||+|++- +...+.....+ ..+|+.++++|+
T Consensus 147 -------~---------------------------------~~~~fD~Ii~d--~~~~~~~~~~l~~~~~l~~~~~~L~- 183 (283)
T 2i7c_A 147 -------N---------------------------------VTNTYDVIIVD--SSDPIGPAETLFNQNFYEKIYNALK- 183 (283)
T ss_dssp -------H---------------------------------CCSCEEEEEEE--CCCTTTGGGGGSSHHHHHHHHHHEE-
T ss_pred -------h---------------------------------CCCCceEEEEc--CCCCCCcchhhhHHHHHHHHHHhcC-
Confidence 0 03569999983 22333333455 699999999999
Q ss_pred CCcEEEEecc
Q 045407 269 KGGIFVMDLY 278 (382)
Q Consensus 269 pGGiFVfDl~ 278 (382)
|||+||+...
T Consensus 184 pgG~lv~~~~ 193 (283)
T 2i7c_A 184 PNGYCVAQCE 193 (283)
T ss_dssp EEEEEEEECC
T ss_pred CCcEEEEECC
Confidence 9999999754
No 185
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.26 E-value=1.1e-11 Score=119.92 Aligned_cols=114 Identities=16% Similarity=0.111 Sum_probs=84.4
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc-CCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG-ADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~-~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
.|.+|||+|||||.++.++++..+..+|+|||+|++|+++|+++... +. .-...++.++++|+.++..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~-~~~~~~~~~v~~~~~D~~~~l~---------- 184 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKN-ISCGYEDKRVNVFIEDASKFLE---------- 184 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTT-TSGGGGSTTEEEEESCHHHHHH----------
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh-hccccCCCcEEEEEccHHHHHh----------
Confidence 46789999999999999999885556899999999999999998532 10 0012489999999865430
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccCC
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSKK 269 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~p 269 (382)
. ...+||+|++-. ...+.....+ ..+|+.++++|+ |
T Consensus 185 ------~---------------------------------~~~~fDvIi~d~--~~p~~~~~~l~~~~~l~~~~~~Lk-p 222 (321)
T 2pt6_A 185 ------N---------------------------------VTNTYDVIIVDS--SDPIGPAETLFNQNFYEKIYNALK-P 222 (321)
T ss_dssp ------H---------------------------------CCSCEEEEEEEC--CCSSSGGGGGSSHHHHHHHHHHEE-E
T ss_pred ------h---------------------------------cCCCceEEEECC--cCCCCcchhhhHHHHHHHHHHhcC-C
Confidence 0 035699999743 2222222334 689999999999 9
Q ss_pred CcEEEEeccC
Q 045407 270 GGIFVMDLYG 279 (382)
Q Consensus 270 GGiFVfDl~g 279 (382)
||+|++....
T Consensus 223 gG~lv~~~~~ 232 (321)
T 2pt6_A 223 NGYCVAQCES 232 (321)
T ss_dssp EEEEEEEECC
T ss_pred CcEEEEEcCC
Confidence 9999997643
No 186
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.26 E-value=3e-11 Score=122.55 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=84.1
Q ss_pred HHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHH-------HHhccccccCCCCcceEEEe
Q 045407 101 LQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWC-------MENNLNKVGADGYSRISLFH 173 (382)
Q Consensus 101 l~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A-------~e~~~~kl~~d~~~RI~l~~ 173 (382)
+..++.. ++-....+|||+|||||.++..+|+.....+|+|||+|+.|+++| +++... .+- ...+|.+++
T Consensus 231 v~~ml~~-l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~-~Gl-~~~nV~~i~ 307 (433)
T 1u2z_A 231 LSDVYQQ-CQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKL-YGM-RLNNVEFSL 307 (433)
T ss_dssp HHHHHHH-TTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH-TTB-CCCCEEEEE
T ss_pred HHHHHHh-cCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH-cCC-CCCceEEEE
Confidence 3444433 333334689999999999999999975445899999999999999 665321 110 024799999
Q ss_pred ccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh
Q 045407 174 GNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA 253 (382)
Q Consensus 174 gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~ 253 (382)
+|.....+. +. ....+||+|++.+..+ . .
T Consensus 308 gD~~~~~~~---------------~~-------------------------------~~~~~FDvIvvn~~l~---~--~ 336 (433)
T 1u2z_A 308 KKSFVDNNR---------------VA-------------------------------ELIPQCDVILVNNFLF---D--E 336 (433)
T ss_dssp SSCSTTCHH---------------HH-------------------------------HHGGGCSEEEECCTTC---C--H
T ss_pred cCccccccc---------------cc-------------------------------cccCCCCEEEEeCccc---c--c
Confidence 864321110 00 0024699999755331 1 6
Q ss_pred HHHHHHHHHHhhccCCCcEEEE-eccC
Q 045407 254 DLVLYFKHVLHALSKKGGIFVM-DLYG 279 (382)
Q Consensus 254 dL~~yFr~V~~~L~~pGGiFVf-Dl~g 279 (382)
++...|+.+++.|+ |||++|+ |.++
T Consensus 337 d~~~~L~el~r~LK-pGG~lVi~d~f~ 362 (433)
T 1u2z_A 337 DLNKKVEKILQTAK-VGCKIISLKSLR 362 (433)
T ss_dssp HHHHHHHHHHTTCC-TTCEEEESSCSS
T ss_pred cHHHHHHHHHHhCC-CCeEEEEeeccC
Confidence 78889999999999 9999998 5443
No 187
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.25 E-value=2.8e-11 Score=108.62 Aligned_cols=130 Identities=11% Similarity=-0.004 Sum_probs=90.3
Q ss_pred CCchHHHHHHhhcCC-----hhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHH
Q 045407 80 MPSKFLLYQQSVQSP-----KGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCM 154 (382)
Q Consensus 80 ~p~~~~LYd~~vq~p-----~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~ 154 (382)
.|....+.+..+... ..++.++...+ +-....+|||+|||+|.++..+++.+ .+|+|+|+|++|++.|+
T Consensus 57 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~ 130 (248)
T 2yvl_A 57 RPTLEEIILLGFERKTQIIYPKDSFYIALKL----NLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQ 130 (248)
T ss_dssp CCCHHHHHHHTSCCSSCCCCHHHHHHHHHHT----TCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHH
T ss_pred CCCHHHHHHhcCcCCCCcccchhHHHHHHhc----CCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHH
Confidence 344445554544433 34445444433 22224579999999999999999994 58999999999999999
Q ss_pred HhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCC
Q 045407 155 ENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLP 234 (382)
Q Consensus 155 e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (382)
++... .+- ..++.++++|+.++. + ...
T Consensus 131 ~~~~~-~~~--~~~~~~~~~d~~~~~-----------------~---------------------------------~~~ 157 (248)
T 2yvl_A 131 KNLKK-FNL--GKNVKFFNVDFKDAE-----------------V---------------------------------PEG 157 (248)
T ss_dssp HHHHH-TTC--CTTEEEECSCTTTSC-----------------C---------------------------------CTT
T ss_pred HHHHH-cCC--CCcEEEEEcChhhcc-----------------c---------------------------------CCC
Confidence 97532 111 147899999986643 1 135
Q ss_pred CccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEecc
Q 045407 235 ARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLY 278 (382)
Q Consensus 235 ~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~ 278 (382)
.||+|++. . .+...+++.+.+.|+ |||++++-..
T Consensus 158 ~~D~v~~~------~---~~~~~~l~~~~~~L~-~gG~l~~~~~ 191 (248)
T 2yvl_A 158 IFHAAFVD------V---REPWHYLEKVHKSLM-EGAPVGFLLP 191 (248)
T ss_dssp CBSEEEEC------S---SCGGGGHHHHHHHBC-TTCEEEEEES
T ss_pred cccEEEEC------C---cCHHHHHHHHHHHcC-CCCEEEEEeC
Confidence 69999972 1 233567899999999 9999999664
No 188
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.25 E-value=1.5e-11 Score=117.27 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=78.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+.+|||+|||+|.++..+++.+.. .+|+|+|+|++|++.|+++... .+..++.++++|+.+...
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~----~g~~~v~~~~~d~~~~~~----------- 140 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER----LGIENVIFVCGDGYYGVP----------- 140 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH----TTCCSEEEEESCGGGCCG-----------
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH----cCCCCeEEEECChhhccc-----------
Confidence 468999999999999999999863 6799999999999999988532 222359999999876430
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
...+||+|++.. .+.++. +.+.+.|+ |||+
T Consensus 141 ---------------------------------------~~~~fD~Iv~~~-~~~~~~---------~~~~~~Lk-pgG~ 170 (317)
T 1dl5_A 141 ---------------------------------------EFSPYDVIFVTV-GVDEVP---------ETWFTQLK-EGGR 170 (317)
T ss_dssp ---------------------------------------GGCCEEEEEECS-BBSCCC---------HHHHHHEE-EEEE
T ss_pred ---------------------------------------cCCCeEEEEEcC-CHHHHH---------HHHHHhcC-CCcE
Confidence 035699999876 444443 46788999 9999
Q ss_pred EEEeccC
Q 045407 273 FVMDLYG 279 (382)
Q Consensus 273 FVfDl~g 279 (382)
+++-+.+
T Consensus 171 lvi~~~~ 177 (317)
T 1dl5_A 171 VIVPINL 177 (317)
T ss_dssp EEEEBCB
T ss_pred EEEEECC
Confidence 9998643
No 189
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.25 E-value=6.4e-12 Score=128.15 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=81.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.+. .+|+|||+|+ |++.|+++... .+ -..+|.++++|+.++.
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~-~~V~gvD~s~-~l~~A~~~~~~-~g--l~~~v~~~~~d~~~~~------------- 220 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGA-RKIYAVEAST-MAQHAEVLVKS-NN--LTDRIVVIPGKVEEVS------------- 220 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTC-SEEEEEECHH-HHHHHHHHHHH-TT--CTTTEEEEESCTTTCC-------------
T ss_pred CCEEEEecCcccHHHHHHHHcCC-CEEEEEEcHH-HHHHHHHHHHH-cC--CCCcEEEEECchhhCc-------------
Confidence 46899999999999999999764 4899999999 99999887532 11 1147999999997754
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ .++||+|++- .+.|+...+++...|..+++.|+ |||++
T Consensus 221 ----~----------------------------------~~~fD~Ivs~--~~~~~~~~e~~~~~l~~~~~~Lk-pgG~l 259 (480)
T 3b3j_A 221 ----L----------------------------------PEQVDIIISE--PMGYMLFNERMLESYLHAKKYLK-PSGNM 259 (480)
T ss_dssp ----C----------------------------------SSCEEEEECC--CCHHHHTCHHHHHHHHHGGGGEE-EEEEE
T ss_pred ----c----------------------------------CCCeEEEEEe--CchHhcCcHHHHHHHHHHHHhcC-CCCEE
Confidence 2 3569999983 23333344677888889999999 99999
Q ss_pred EEec
Q 045407 274 VMDL 277 (382)
Q Consensus 274 VfDl 277 (382)
++..
T Consensus 260 i~~~ 263 (480)
T 3b3j_A 260 FPTI 263 (480)
T ss_dssp ESCE
T ss_pred EEEe
Confidence 9643
No 190
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.25 E-value=5.7e-12 Score=121.96 Aligned_cols=112 Identities=16% Similarity=0.137 Sum_probs=79.6
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc-CCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG-ADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~-~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
.|.+|||+|||+|.++.++++..+..+|++||+|++|+++|+++... +. .-...||.++++|+++...
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~-~~~~~~~~rv~~~~~D~~~~l~---------- 176 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPG-MSCGFSHPKLDLFCGDGFEFLK---------- 176 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTT-TSGGGGCTTEEEECSCHHHHHH----------
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHH-hccccCCCCEEEEEChHHHHHH----------
Confidence 46789999999999999999986567899999999999999997532 10 0012589999999865430
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccCC
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSKK 269 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~p 269 (382)
. ...+||+|++-. ...+.....+ ..+|+.++++|+ |
T Consensus 177 ------~---------------------------------~~~~fD~Ii~d~--~~~~~~~~~l~t~~~l~~~~~~Lk-p 214 (314)
T 2b2c_A 177 ------N---------------------------------HKNEFDVIITDS--SDPVGPAESLFGQSYYELLRDALK-E 214 (314)
T ss_dssp ------H---------------------------------CTTCEEEEEECC--C-------------HHHHHHHHEE-E
T ss_pred ------h---------------------------------cCCCceEEEEcC--CCCCCcchhhhHHHHHHHHHhhcC-C
Confidence 0 135799999733 3333323344 689999999999 9
Q ss_pred CcEEEEec
Q 045407 270 GGIFVMDL 277 (382)
Q Consensus 270 GGiFVfDl 277 (382)
||+|+++.
T Consensus 215 gG~lv~~~ 222 (314)
T 2b2c_A 215 DGILSSQG 222 (314)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999986
No 191
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.24 E-value=1.1e-11 Score=115.16 Aligned_cols=101 Identities=15% Similarity=0.122 Sum_probs=79.2
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++. ++..+|+|+|+|++|++.|+++..... +..++.++++|+.++.
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---g~~~v~~~~~d~~~~~------------ 175 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY---DIGNVRTSRSDIADFI------------ 175 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS---CCTTEEEECSCTTTCC------------
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC---CCCcEEEEECchhccC------------
Confidence 457999999999999999998 555689999999999999999853210 2247999999987632
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
....||+|++ .+. +....++.+++.|+ |||+
T Consensus 176 ---------------------------------------~~~~fD~Vi~------~~~---~~~~~l~~~~~~Lk-pgG~ 206 (275)
T 1yb2_A 176 ---------------------------------------SDQMYDAVIA------DIP---DPWNHVQKIASMMK-PGSV 206 (275)
T ss_dssp ---------------------------------------CSCCEEEEEE------CCS---CGGGSHHHHHHTEE-EEEE
T ss_pred ---------------------------------------cCCCccEEEE------cCc---CHHHHHHHHHHHcC-CCCE
Confidence 1356999998 223 33578899999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
+++-..
T Consensus 207 l~i~~~ 212 (275)
T 1yb2_A 207 ATFYLP 212 (275)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 998553
No 192
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.24 E-value=4.4e-12 Score=119.91 Aligned_cols=104 Identities=12% Similarity=-0.104 Sum_probs=73.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE--eccCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF--HGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~--~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+|||+|||||.++..++++ .+|+|||+|+ |+..|+++... . ...+.+|.++ ++|+++++
T Consensus 76 ~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~-~-~~~~~~v~~~~~~~D~~~l~------------ 137 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRI-T-ESYGWNIVKFKSRVDIHTLP------------ 137 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCC-C-CBTTGGGEEEECSCCTTTSC------------
T ss_pred CEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhh-h-hccCCCeEEEecccCHhHCC------------
Confidence 47999999999999999988 3699999999 65433322111 0 0011268889 89987654
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh----hHHHHHHHHHHhhccC
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR----ADLVLYFKHVLHALSK 268 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r----~dL~~yFr~V~~~L~~ 268 (382)
..+||+|+|-.. ++.... ......|+.++++|+
T Consensus 138 ----------------------------------------~~~fD~V~sd~~--~~~~~~~~d~~~~l~~L~~~~r~Lk- 174 (265)
T 2oxt_A 138 ----------------------------------------VERTDVIMCDVG--ESSPKWSVESERTIKILELLEKWKV- 174 (265)
T ss_dssp ----------------------------------------CCCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred ----------------------------------------CCCCcEEEEeCc--ccCCccchhHHHHHHHHHHHHHHhc-
Confidence 457999999643 333221 112248899999999
Q ss_pred CCc--EEEEeccC
Q 045407 269 KGG--IFVMDLYG 279 (382)
Q Consensus 269 pGG--iFVfDl~g 279 (382)
||| .||++++.
T Consensus 175 pGG~~~fv~kv~~ 187 (265)
T 2oxt_A 175 KNPSADFVVKVLC 187 (265)
T ss_dssp HCTTCEEEEEESC
T ss_pred cCCCeEEEEEeCC
Confidence 999 99998886
No 193
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.24 E-value=4.9e-12 Score=121.51 Aligned_cols=113 Identities=14% Similarity=0.112 Sum_probs=81.1
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccc-cCCCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKV-GADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl-~~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..|.+|||+|||||.++.++++..+..+|++||+|++|++.|+++... + ..-...++.++++|.++...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~-~~~~~~~~rv~v~~~Da~~~l~--------- 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPG-MAIGYSSSKLTLHVGDGFEFMK--------- 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHH-HHGGGGCTTEEEEESCHHHHHH---------
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHH-hhcccCCCcEEEEECcHHHHHh---------
Confidence 346789999999999999999987667899999999999999997421 1 00012489999999865320
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhH--HHHHHHHHHhhccC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRAD--LVLYFKHVLHALSK 268 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~d--L~~yFr~V~~~L~~ 268 (382)
. ...+||+|++-.. ..+..... ...+|+.++++|+
T Consensus 164 -------~---------------------------------~~~~fD~Ii~d~~--~~~~~~~~l~~~~~l~~~~~~Lk- 200 (304)
T 2o07_A 164 -------Q---------------------------------NQDAFDVIITDSS--DPMGPAESLFKESYYQLMKTALK- 200 (304)
T ss_dssp -------T---------------------------------CSSCEEEEEEECC-------------CHHHHHHHHHEE-
T ss_pred -------h---------------------------------CCCCceEEEECCC--CCCCcchhhhHHHHHHHHHhccC-
Confidence 0 1356999998332 22111111 2578999999999
Q ss_pred CCcEEEEec
Q 045407 269 KGGIFVMDL 277 (382)
Q Consensus 269 pGGiFVfDl 277 (382)
|||+||++.
T Consensus 201 pgG~lv~~~ 209 (304)
T 2o07_A 201 EDGVLCCQG 209 (304)
T ss_dssp EEEEEEEEE
T ss_pred CCeEEEEec
Confidence 999999976
No 194
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.24 E-value=1.5e-11 Score=122.64 Aligned_cols=125 Identities=16% Similarity=0.100 Sum_probs=88.2
Q ss_pred cCChhhHHHHHHHHHHh--hCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcce
Q 045407 92 QSPKGDISYLQKFFLIY--VGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRI 169 (382)
Q Consensus 92 q~p~~Di~yl~~~f~~y--~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI 169 (382)
+|..=-..|-..+.+.. ..| .+|||+|||||.||...|+.|.. +|+|||.|+ |++.|++.... .+ -..+|
T Consensus 63 ~D~~Rt~aY~~Ai~~~~~~~~~---k~VLDvG~GtGiLs~~Aa~aGA~-~V~ave~s~-~~~~a~~~~~~-n~--~~~~i 134 (376)
T 4hc4_A 63 ADRVRTDAYRLGILRNWAALRG---KTVLDVGAGTGILSIFCAQAGAR-RVYAVEASA-IWQQAREVVRF-NG--LEDRV 134 (376)
T ss_dssp HCHHHHHHHHHHHHTTHHHHTT---CEEEEETCTTSHHHHHHHHTTCS-EEEEEECST-THHHHHHHHHH-TT--CTTTE
T ss_pred CCHHHHHHHHHHHHhCHHhcCC---CEEEEeCCCccHHHHHHHHhCCC-EEEEEeChH-HHHHHHHHHHH-cC--CCceE
Confidence 44444445654444321 123 36999999999999999999974 899999996 89999876432 11 12479
Q ss_pred EEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc
Q 045407 170 SLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL 249 (382)
Q Consensus 170 ~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL 249 (382)
.++++||.++. + ..++|+|+|=... .+|
T Consensus 135 ~~i~~~~~~~~-----------------l----------------------------------pe~~DvivsE~~~-~~l 162 (376)
T 4hc4_A 135 HVLPGPVETVE-----------------L----------------------------------PEQVDAIVSEWMG-YGL 162 (376)
T ss_dssp EEEESCTTTCC-----------------C----------------------------------SSCEEEEECCCCB-TTB
T ss_pred EEEeeeeeeec-----------------C----------------------------------CccccEEEeeccc-ccc
Confidence 99999998876 3 4679999984433 334
Q ss_pred CChhHHHHHHHHHHhhccCCCcEEEEec
Q 045407 250 HKRADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 250 ~~r~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
.....+..++....+.|+ |||++|.+.
T Consensus 163 ~~e~~l~~~l~a~~r~Lk-p~G~~iP~~ 189 (376)
T 4hc4_A 163 LHESMLSSVLHARTKWLK-EGGLLLPAS 189 (376)
T ss_dssp TTTCSHHHHHHHHHHHEE-EEEEEESCE
T ss_pred cccchhhhHHHHHHhhCC-CCceECCcc
Confidence 444566666766778888 999999864
No 195
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.24 E-value=2.7e-11 Score=110.97 Aligned_cols=123 Identities=16% Similarity=0.117 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEecc
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGN 175 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gD 175 (382)
...++..+... ..|.+|||+|||||..+..+++.-+ ..+|+|+|+|++|++.|+++... .+ -..+|.++++|
T Consensus 58 ~~~~l~~l~~~----~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g--~~~~i~~~~gd 130 (237)
T 3c3y_A 58 AGQLMSFVLKL----VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK-AG--VEHKINFIESD 130 (237)
T ss_dssp HHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-TT--CGGGEEEEESC
T ss_pred HHHHHHHHHHh----hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cC--CCCcEEEEEcC
Confidence 33455554443 1256899999999999999999743 46899999999999999987532 11 12479999999
Q ss_pred CCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH
Q 045407 176 VLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL 255 (382)
Q Consensus 176 V~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL 255 (382)
..+... . +.+ .++..++||+|++-. .....
T Consensus 131 a~~~l~-------------~--l~~----------------------------~~~~~~~fD~I~~d~-------~~~~~ 160 (237)
T 3c3y_A 131 AMLALD-------------N--LLQ----------------------------GQESEGSYDFGFVDA-------DKPNY 160 (237)
T ss_dssp HHHHHH-------------H--HHH----------------------------STTCTTCEEEEEECS-------CGGGH
T ss_pred HHHHHH-------------H--HHh----------------------------ccCCCCCcCEEEECC-------chHHH
Confidence 865420 0 000 000135799998643 23467
Q ss_pred HHHHHHHHhhccCCCcEEEEec
Q 045407 256 VLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 256 ~~yFr~V~~~L~~pGGiFVfDl 277 (382)
..+|+.+++.|+ |||++|+|-
T Consensus 161 ~~~l~~~~~~L~-pGG~lv~d~ 181 (237)
T 3c3y_A 161 IKYHERLMKLVK-VGGIVAYDN 181 (237)
T ss_dssp HHHHHHHHHHEE-EEEEEEEEC
T ss_pred HHHHHHHHHhcC-CCeEEEEec
Confidence 889999999999 999999973
No 196
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.23 E-value=2.4e-11 Score=101.19 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=76.9
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++. |+..+++|+|+|+ |++. .++.++++|+.++++...
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~-------- 79 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKA-------- 79 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHH--------
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhh--------
Confidence 458999999999999999998 6657899999999 7632 368899999987652100
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh--hH------HHHHHHHHHh
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR--AD------LVLYFKHVLH 264 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r--~d------L~~yFr~V~~ 264 (382)
+. . .+...+||+|++.. .+.++... +. ....++.+++
T Consensus 80 ---~~------------------~-------------~~~~~~~D~i~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (180)
T 1ej0_A 80 ---LL------------------E-------------RVGDSKVQVVMSDM-APNMSGTPAVDIPRAMYLVELALEMCRD 124 (180)
T ss_dssp ---HH------------------H-------------HHTTCCEEEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hh------------------c-------------cCCCCceeEEEECC-CccccCCCccchHHHHHHHHHHHHHHHH
Confidence 00 0 01135799999843 33333322 11 2688999999
Q ss_pred hccCCCcEEEEeccCCC
Q 045407 265 ALSKKGGIFVMDLYGGT 281 (382)
Q Consensus 265 ~L~~pGGiFVfDl~gg~ 281 (382)
.|+ |||++++-.+...
T Consensus 125 ~L~-~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 125 VLA-PGGSFVVKVFQGE 140 (180)
T ss_dssp HEE-EEEEEEEEEESST
T ss_pred HcC-CCcEEEEEEecCC
Confidence 999 9999999655443
No 197
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.23 E-value=6e-12 Score=119.98 Aligned_cols=113 Identities=16% Similarity=0.063 Sum_probs=80.3
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccc-cCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKV-GADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl-~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
.|.+|||+|||+|.++.++++..+..+|++||+|+.|+++|+++... + ..-...++.++++|++++..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~-~~~~~~~~~v~~~~~D~~~~l~---------- 158 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQ-TSCGFDDPRAEIVIANGAEYVR---------- 158 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHH-HHGGGGCTTEEEEESCHHHHGG----------
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHh-hccccCCCceEEEECcHHHHHh----------
Confidence 36789999999999999999985456899999999999999997521 0 00112489999999865430
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcc-cCChhHH--HHHHHHHHhhccC
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCC-LHKRADL--VLYFKHVLHALSK 268 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~y-L~~r~dL--~~yFr~V~~~L~~ 268 (382)
. ...+||+|++-. .+. +.....+ ..+|+.++++|+
T Consensus 159 ------~---------------------------------~~~~fD~Ii~d~--~~~~~~~~~~l~~~~~l~~~~~~Lk- 196 (296)
T 1inl_A 159 ------K---------------------------------FKNEFDVIIIDS--TDPTAGQGGHLFTEEFYQACYDALK- 196 (296)
T ss_dssp ------G---------------------------------CSSCEEEEEEEC------------CCSHHHHHHHHHHEE-
T ss_pred ------h---------------------------------CCCCceEEEEcC--CCcccCchhhhhHHHHHHHHHHhcC-
Confidence 0 135699999732 221 2222222 688999999999
Q ss_pred CCcEEEEecc
Q 045407 269 KGGIFVMDLY 278 (382)
Q Consensus 269 pGGiFVfDl~ 278 (382)
|||+|++...
T Consensus 197 pgG~lv~~~~ 206 (296)
T 1inl_A 197 EDGVFSAETE 206 (296)
T ss_dssp EEEEEEEECC
T ss_pred CCcEEEEEcc
Confidence 9999999754
No 198
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.22 E-value=5.1e-11 Score=111.80 Aligned_cols=103 Identities=11% Similarity=0.070 Sum_probs=81.4
Q ss_pred CcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
.+|||+|||||.++..+|+. |+..+|+|||+|++||+.+++++.. ...+..+.+|.+.|....
T Consensus 79 ~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~---------- 142 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYR---------- 142 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGT----------
T ss_pred CEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccc----------
Confidence 47999999999999999987 7888999999999999999988532 246889999998876210
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+....+|+|++-. .-..+....++++++.|+ |||.|
T Consensus 143 -------------------------------------~~~~~vDvVf~d~------~~~~~~~~~l~~~~r~LK-pGG~l 178 (233)
T 4df3_A 143 -------------------------------------HLVEGVDGLYADV------AQPEQAAIVVRNARFFLR-DGGYM 178 (233)
T ss_dssp -------------------------------------TTCCCEEEEEECC------CCTTHHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------cccceEEEEEEec------cCChhHHHHHHHHHHhcc-CCCEE
Confidence 1145689886532 222466788999999999 99999
Q ss_pred EEec
Q 045407 274 VMDL 277 (382)
Q Consensus 274 VfDl 277 (382)
++-+
T Consensus 179 vI~i 182 (233)
T 4df3_A 179 LMAI 182 (233)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9854
No 199
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.21 E-value=3.3e-11 Score=111.76 Aligned_cols=101 Identities=15% Similarity=0.115 Sum_probs=78.7
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++. ++..+|+|+|+|+++++.|+++... .+ -..++.++++|+.++.
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~--~~~~v~~~~~d~~~~~------------ 177 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK-WG--LIERVTIKVRDISEGF------------ 177 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHH-TT--CGGGEEEECCCGGGCC------------
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cC--CCCCEEEEECCHHHcc------------
Confidence 457999999999999999999 7667999999999999999998532 11 0147999999985432
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
....||+|++- + .+...+++.++++|+ |||+
T Consensus 178 ---------------------------------------~~~~~D~V~~~------~---~~~~~~l~~~~~~L~-pgG~ 208 (277)
T 1o54_A 178 ---------------------------------------DEKDVDALFLD------V---PDPWNYIDKCWEALK-GGGR 208 (277)
T ss_dssp ---------------------------------------SCCSEEEEEEC------C---SCGGGTHHHHHHHEE-EEEE
T ss_pred ---------------------------------------cCCccCEEEEC------C---cCHHHHHHHHHHHcC-CCCE
Confidence 13569999872 1 233578899999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
+++-..
T Consensus 209 l~~~~~ 214 (277)
T 1o54_A 209 FATVCP 214 (277)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999553
No 200
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.20 E-value=6.3e-12 Score=119.63 Aligned_cols=105 Identities=9% Similarity=-0.151 Sum_probs=74.0
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE--eccCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF--HGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~--~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+|||+|||||.++..++++ .+|+|||+|+ |+..|+++... ....+.+|.++ ++|+++++
T Consensus 84 ~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~--~~~~~~~v~~~~~~~D~~~l~------------ 145 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRL--VETFGWNLITFKSKVDVTKME------------ 145 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCC--CCCTTGGGEEEECSCCGGGCC------------
T ss_pred CEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhh--hhhcCCCeEEEeccCcHhhCC------------
Confidence 47999999999999999998 3699999999 76444333211 00111268899 88986543
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh----hHHHHHHHHHHhhccC
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR----ADLVLYFKHVLHALSK 268 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r----~dL~~yFr~V~~~L~~ 268 (382)
..+||+|+|-.. ++.... ......|+.+++.|+
T Consensus 146 ----------------------------------------~~~fD~Vvsd~~--~~~~~~~~d~~~~l~~L~~~~r~Lk- 182 (276)
T 2wa2_A 146 ----------------------------------------PFQADTVLCDIG--ESNPTAAVEASRTLTVLNVISRWLE- 182 (276)
T ss_dssp ----------------------------------------CCCCSEEEECCC--CCCSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred ----------------------------------------CCCcCEEEECCC--cCCCchhhhHHHHHHHHHHHHHHhc-
Confidence 357999999643 333221 111247899999999
Q ss_pred CCc--EEEEeccCC
Q 045407 269 KGG--IFVMDLYGG 280 (382)
Q Consensus 269 pGG--iFVfDl~gg 280 (382)
||| .||++++..
T Consensus 183 pGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 183 YNQGCGFCVKVLNP 196 (276)
T ss_dssp HSTTCEEEEEESCC
T ss_pred cCCCcEEEEEeCCC
Confidence 999 999988863
No 201
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.20 E-value=2.1e-11 Score=112.01 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=78.6
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||+|.++..+++. ++..+|+|+|+|++|++.|+++.....+. -..++.++++|+.+..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~~~~v~~~~~d~~~~~------------ 166 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-PPDNWRLVVSDLADSE------------ 166 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-CCTTEEEECSCGGGCC------------
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCCcEEEEECchHhcC------------
Confidence 457999999999999999995 55568999999999999999985321010 0247999999986554
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+....||+|++- +. +...++++++++|+ |||+
T Consensus 167 --------------------------------------~~~~~~D~v~~~------~~---~~~~~l~~~~~~L~-pgG~ 198 (280)
T 1i9g_A 167 --------------------------------------LPDGSVDRAVLD------ML---APWEVLDAVSRLLV-AGGV 198 (280)
T ss_dssp --------------------------------------CCTTCEEEEEEE------SS---CGGGGHHHHHHHEE-EEEE
T ss_pred --------------------------------------CCCCceeEEEEC------Cc---CHHHHHHHHHHhCC-CCCE
Confidence 113569999972 12 23467999999999 9999
Q ss_pred EEEecc
Q 045407 273 FVMDLY 278 (382)
Q Consensus 273 FVfDl~ 278 (382)
+++-..
T Consensus 199 l~~~~~ 204 (280)
T 1i9g_A 199 LMVYVA 204 (280)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999553
No 202
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.20 E-value=1.4e-11 Score=118.35 Aligned_cols=114 Identities=18% Similarity=0.092 Sum_probs=82.9
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC--CCCcceEEEeccCCCchhhhhcccchh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA--DGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~--d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
.|.+|||+|||+|.++.++++..+..+|+|||+|+.|+++|+++... +.. -...++.++++|+++...
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~-~~~~~~~~~~v~~~~~D~~~~l~--------- 146 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPE-WHQGAFDDPRAVLVIDDARAYLE--------- 146 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHH-HHTTGGGCTTEEEEESCHHHHHH---------
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHh-hccccccCCceEEEEchHHHHHH---------
Confidence 46789999999999999999985556899999999999999997421 100 012589999999865420
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc-CChhH--HHHHHHHHHhhcc
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL-HKRAD--LVLYFKHVLHALS 267 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL-~~r~d--L~~yFr~V~~~L~ 267 (382)
. ...+||+|++-...-..+ ..... ...+|+.++++|+
T Consensus 147 -------~---------------------------------~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk 186 (314)
T 1uir_A 147 -------R---------------------------------TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLN 186 (314)
T ss_dssp -------H---------------------------------CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEE
T ss_pred -------h---------------------------------cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcC
Confidence 0 135799999854321100 11122 3789999999999
Q ss_pred CCCcEEEEec
Q 045407 268 KKGGIFVMDL 277 (382)
Q Consensus 268 ~pGGiFVfDl 277 (382)
|||+|++-.
T Consensus 187 -pgG~lv~~~ 195 (314)
T 1uir_A 187 -PGGVMGMQT 195 (314)
T ss_dssp -EEEEEEEEE
T ss_pred -CCcEEEEEc
Confidence 999999964
No 203
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.20 E-value=2.4e-11 Score=118.16 Aligned_cols=114 Identities=18% Similarity=0.157 Sum_probs=81.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.|. +|+|||+|+.||++|+++... .+- ...++.++++|+.++... .
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~-~gl-~~~~v~~i~~D~~~~l~~-~--------- 219 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVL-AGL-EQAPIRWICEDAMKFIQR-E--------- 219 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHH-HTC-TTSCEEEECSCHHHHHHH-H---------
T ss_pred CCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHH-cCC-CccceEEEECcHHHHHHH-H---------
Confidence 35799999999999999999885 799999999999999998532 111 111589999998765410 0
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEE----ccchhc--ccCChhHHHHHHHHHHhhcc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICA----FNYSCC--CLHKRADLVLYFKHVLHALS 267 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~a----fn~S~~--yL~~r~dL~~yFr~V~~~L~ 267 (382)
.. ...+||+|++ +..+-. -++-..++...++.+.+.|+
T Consensus 220 ---~~---------------------------------~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lk 263 (332)
T 2igt_A 220 ---ER---------------------------------RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILS 263 (332)
T ss_dssp ---HH---------------------------------HTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBC
T ss_pred ---Hh---------------------------------cCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0246999998 332200 11223577889999999999
Q ss_pred CCCcEEEEecc
Q 045407 268 KKGGIFVMDLY 278 (382)
Q Consensus 268 ~pGGiFVfDl~ 278 (382)
|||+|++...
T Consensus 264 -pgG~lli~~~ 273 (332)
T 2igt_A 264 -PKALGLVLTA 273 (332)
T ss_dssp -TTCCEEEEEE
T ss_pred -cCcEEEEEEC
Confidence 9999887554
No 204
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.20 E-value=1.7e-10 Score=108.25 Aligned_cols=113 Identities=14% Similarity=0.049 Sum_probs=74.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeC-CHHHHHHHHHhccccc-cCCCC-----cceEEEeccCCCchhhhhcc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDL-DLEALEWCMENNLNKV-GADGY-----SRISLFHGNVLQPLEAKLVR 186 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDL-S~emL~~A~e~~~~kl-~~d~~-----~RI~l~~gDV~~~~~~~~~~ 186 (382)
..+|||+|||||.++..+++.|. .+|+|+|+ |++||+.|+++..... ...+. .+|.+...|..+....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~-~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~---- 154 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGA-DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS---- 154 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC-SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH----
T ss_pred CCeEEEecccccHHHHHHHHcCC-CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH----
Confidence 35799999999999999999885 38999999 8999999999852100 00111 2577776665443200
Q ss_pred cchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhc
Q 045407 187 YEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHAL 266 (382)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L 266 (382)
+... +...+||+|++.. . +....++...++.+.+.|
T Consensus 155 -----~~~~-----------------------------------~~~~~fD~Ii~~d-v---l~~~~~~~~ll~~l~~~L 190 (281)
T 3bzb_A 155 -----LQRC-----------------------------------TGLQRFQVVLLAD-L---LSFHQAHDALLRSVKMLL 190 (281)
T ss_dssp -----HHHH-----------------------------------HSCSSBSEEEEES-C---CSCGGGHHHHHHHHHHHB
T ss_pred -----HHhh-----------------------------------ccCCCCCEEEEeC-c---ccChHHHHHHHHHHHHHh
Confidence 0000 0135799998854 2 233467788888999988
Q ss_pred cC--C--CcEEEE
Q 045407 267 SK--K--GGIFVM 275 (382)
Q Consensus 267 ~~--p--GGiFVf 275 (382)
++ | ||++++
T Consensus 191 k~~~p~~gG~l~v 203 (281)
T 3bzb_A 191 ALPANDPTAVALV 203 (281)
T ss_dssp CCTTTCTTCEEEE
T ss_pred cccCCCCCCEEEE
Confidence 61 5 997655
No 205
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.20 E-value=8.9e-11 Score=102.96 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=78.1
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEe
Q 045407 94 PKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFH 173 (382)
Q Consensus 94 p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~ 173 (382)
+..-+..+....... +...+.+|||+|||||.++..+++.|. .+|+|||+|+.|++.|+++.. ++.+++
T Consensus 33 ~~~~~~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~---------~~~~~~ 101 (200)
T 1ne2_A 33 DASTAAYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLLGA-ESVTAFDIDPDAIETAKRNCG---------GVNFMV 101 (200)
T ss_dssp CHHHHHHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHTTB-SEEEEEESCHHHHHHHHHHCT---------TSEEEE
T ss_pred CHHHHHHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhcC---------CCEEEE
Confidence 333334444444332 223356899999999999999999864 379999999999999999851 688999
Q ss_pred ccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh
Q 045407 174 GNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA 253 (382)
Q Consensus 174 gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~ 253 (382)
+|+.+++ ..||+|++- -.+.++.. .
T Consensus 102 ~d~~~~~-----------------------------------------------------~~~D~v~~~-~p~~~~~~-~ 126 (200)
T 1ne2_A 102 ADVSEIS-----------------------------------------------------GKYDTWIMN-PPFGSVVK-H 126 (200)
T ss_dssp CCGGGCC-----------------------------------------------------CCEEEEEEC-CCC-------
T ss_pred CcHHHCC-----------------------------------------------------CCeeEEEEC-CCchhccC-c
Confidence 9985432 469999974 34555443 3
Q ss_pred HHHHHHHHHHhhccCCCcEEEEe
Q 045407 254 DLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 254 dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
....+++.+.+.| |++++.-
T Consensus 127 ~~~~~l~~~~~~~---g~~~~~~ 146 (200)
T 1ne2_A 127 SDRAFIDKAFETS---MWIYSIG 146 (200)
T ss_dssp -CHHHHHHHHHHE---EEEEEEE
T ss_pred hhHHHHHHHHHhc---CcEEEEE
Confidence 3457888898888 5666664
No 206
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=2.8e-11 Score=108.22 Aligned_cols=113 Identities=10% Similarity=0.027 Sum_probs=75.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++++ .+|+|||+++.+ . ..++.++++|++++.....+ .
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~-------~--------~~~v~~~~~D~~~~~~~~~~-------~ 81 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME-------E--------IAGVRFIRCDIFKETIFDDI-------D 81 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC-------C--------CTTCEEEECCTTSSSHHHHH-------H
T ss_pred CCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc-------c--------CCCeEEEEccccCHHHHHHH-------H
Confidence 3579999999999999999994 589999999831 1 13689999999887521110 0
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc---c----hhcccCChhHHHHHHHHHHhhc
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN---Y----SCCCLHKRADLVLYFKHVLHAL 266 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn---~----S~~yL~~r~dL~~yFr~V~~~L 266 (382)
..+.. . ..++||+|+|-- . ........+.+...++.+.+.|
T Consensus 82 ~~~~~------------------~--------------~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~L 129 (191)
T 3dou_A 82 RALRE------------------E--------------GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYL 129 (191)
T ss_dssp HHHHH------------------H--------------TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHhhc------------------c--------------cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHc
Confidence 00000 0 013799999832 1 1112222234567899999999
Q ss_pred cCCCcEEEEeccCCCch
Q 045407 267 SKKGGIFVMDLYGGTSS 283 (382)
Q Consensus 267 ~~pGGiFVfDl~gg~s~ 283 (382)
+ |||.||+-++.+...
T Consensus 130 k-pGG~lv~k~~~~~~~ 145 (191)
T 3dou_A 130 R-NGGNVLLKQFQGDMT 145 (191)
T ss_dssp E-EEEEEEEEEECSTHH
T ss_pred c-CCCEEEEEEcCCCCH
Confidence 9 999999988866543
No 207
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=2.1e-11 Score=117.48 Aligned_cols=104 Identities=13% Similarity=-0.028 Sum_probs=73.7
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeC----CHHHHHHHHHhccccccCCCCcceEEEec-cCCCchhhhhcccch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDL----DLEALEWCMENNLNKVGADGYSRISLFHG-NVLQPLEAKLVRYEP 189 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDL----S~emL~~A~e~~~~kl~~d~~~RI~l~~g-DV~~~~~~~~~~~~~ 189 (382)
.+|||+|||||.++..+++++ +|+|||+ ++.+++.+. .. ..+..+|.++++ |++.++
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~---~V~gvD~~~~~~~~~~~~~~---~~---~~~~~~v~~~~~~D~~~l~--------- 145 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK---NVREVKGLTKGGPGHEEPIP---MS---TYGWNLVRLQSGVDVFFIP--------- 145 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST---TEEEEEEECCCSTTSCCCCC---CC---STTGGGEEEECSCCTTTSC---------
T ss_pred CEEEEEcCCCCHHHHHHHhcC---CEEEEeccccCchhHHHHHH---hh---hcCCCCeEEEeccccccCC---------
Confidence 579999999999999999983 6999999 665552111 11 111247899998 876554
Q ss_pred hhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchh---cccCChhHHHHHHHHHHhhc
Q 045407 190 QKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSC---CCLHKRADLVLYFKHVLHAL 266 (382)
Q Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~---~yL~~r~dL~~yFr~V~~~L 266 (382)
..+||+|+|-. ++ .++.+.......|+.++++|
T Consensus 146 -------------------------------------------~~~fD~V~sd~-~~~~g~~~~d~~~~l~~L~~~~~~L 181 (305)
T 2p41_A 146 -------------------------------------------PERCDTLLCDI-GESSPNPTVEAGRTLRVLNLVENWL 181 (305)
T ss_dssp -------------------------------------------CCCCSEEEECC-CCCCSSHHHHHHHHHHHHHHHHHHC
T ss_pred -------------------------------------------cCCCCEEEECC-ccccCcchhhHHHHHHHHHHHHHHh
Confidence 35799999932 22 22222232336889999999
Q ss_pred cCCCcEEEEeccCCC
Q 045407 267 SKKGGIFVMDLYGGT 281 (382)
Q Consensus 267 ~~pGGiFVfDl~gg~ 281 (382)
+ |||+||++++.+.
T Consensus 182 k-pGG~~v~kv~~~~ 195 (305)
T 2p41_A 182 S-NNTQFCVKVLNPY 195 (305)
T ss_dssp C-TTCEEEEEESCCC
T ss_pred C-CCCEEEEEeCCCC
Confidence 9 9999999998763
No 208
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.19 E-value=3.2e-11 Score=122.15 Aligned_cols=103 Identities=21% Similarity=0.207 Sum_probs=76.2
Q ss_pred CCCcccccCCC------ccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhc
Q 045407 113 QPLHLQEDFCG------TALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLV 185 (382)
Q Consensus 113 ~p~~LLEl~CG------TG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~ 185 (382)
.|.+|||+||| ||..+..+++. .+..+|+|||+|+.|. . ...+|.|+++|+.++++...+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-----~--------~~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-----V--------DELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-----G--------CBTTEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-----h--------cCCCcEEEEecccccchhhhh
Confidence 36789999999 76667776654 4667999999999983 1 124899999999987731100
Q ss_pred ccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhh
Q 045407 186 RYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHA 265 (382)
Q Consensus 186 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~ 265 (382)
.- ...+||+|+|.. + |...+...+|+.++++
T Consensus 283 -----------~~---------------------------------~d~sFDlVisdg-s----H~~~d~~~aL~el~rv 313 (419)
T 3sso_A 283 -----------AR---------------------------------RYGPFDIVIDDG-S----HINAHVRTSFAALFPH 313 (419)
T ss_dssp -----------HH---------------------------------HHCCEEEEEECS-C----CCHHHHHHHHHHHGGG
T ss_pred -----------hc---------------------------------ccCCccEEEECC-c----ccchhHHHHHHHHHHh
Confidence 00 025799999742 2 2346889999999999
Q ss_pred ccCCCcEEEE-ecc
Q 045407 266 LSKKGGIFVM-DLY 278 (382)
Q Consensus 266 L~~pGGiFVf-Dl~ 278 (382)
|+ |||+||+ |++
T Consensus 314 LK-PGGvlVi~Dl~ 326 (419)
T 3sso_A 314 VR-PGGLYVIEDMW 326 (419)
T ss_dssp EE-EEEEEEEECGG
T ss_pred cC-CCeEEEEEecc
Confidence 99 9999999 665
No 209
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.19 E-value=5e-11 Score=107.77 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=76.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||+|.++..+++.++ .+|+|+|+|++|++.|+++... .+..++.++++|+..+.
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~----~~~~~v~~~~~d~~~~~------------- 153 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLER----AGVKNVHVILGDGSKGF------------- 153 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHH----TTCCSEEEEESCGGGCC-------------
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHH----cCCCCcEEEECCcccCC-------------
Confidence 45799999999999999999986 5799999999999999997532 22335899999972211
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
. ...+||+|++.. ++.++. ..+++.|+ |||++
T Consensus 154 ----~---------------------------------~~~~fD~Ii~~~-~~~~~~---------~~~~~~L~-pgG~l 185 (235)
T 1jg1_A 154 ----P---------------------------------PKAPYDVIIVTA-GAPKIP---------EPLIEQLK-IGGKL 185 (235)
T ss_dssp ----G---------------------------------GGCCEEEEEECS-BBSSCC---------HHHHHTEE-EEEEE
T ss_pred ----C---------------------------------CCCCccEEEECC-cHHHHH---------HHHHHhcC-CCcEE
Confidence 0 023599999875 444433 26788999 99999
Q ss_pred EEeccCC
Q 045407 274 VMDLYGG 280 (382)
Q Consensus 274 VfDl~gg 280 (382)
|+-+.++
T Consensus 186 vi~~~~~ 192 (235)
T 1jg1_A 186 IIPVGSY 192 (235)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9987643
No 210
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.18 E-value=5.5e-10 Score=97.30 Aligned_cols=127 Identities=13% Similarity=0.217 Sum_probs=75.4
Q ss_pred CCcccccCCCccHhHHHHHHhCC--CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS--RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~--~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+|||+|||||.++..++++.+ ..+|+|+|+|+.+ . ..++.++++|+.++.. .
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-------~--------~~~v~~~~~d~~~~~~---------~ 78 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-------P--------IPNVYFIQGEIGKDNM---------N 78 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-------C--------CTTCEEEECCTTTTSS---------C
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-------C--------CCCceEEEccccchhh---------h
Confidence 35799999999999999999865 4689999999921 1 1368899999977641 0
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhccc----CCh----hHHHHHHHHHH
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCL----HKR----ADLVLYFKHVL 263 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL----~~r----~dL~~yFr~V~ 263 (382)
.+.+....+.... ........ ..+....||+|+|.. ++.+. .+. +.....++.++
T Consensus 79 ~~~~~~~i~~~~~---~~~~~~~~-------------~~~~~~~fD~v~~~~-~~~~~g~~~~d~~~~~~~~~~~l~~~~ 141 (201)
T 2plw_A 79 NIKNINYIDNMNN---NSVDYKLK-------------EILQDKKIDIILSDA-AVPCIGNKIDDHLNSCELTLSITHFME 141 (201)
T ss_dssp CC--------------CHHHHHHH-------------HHHTTCCEEEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccc---hhhHHHHH-------------hhcCCCcccEEEeCC-CcCCCCCcccCHHHHHHHHHHHHHHHH
Confidence 1111111000000 00000000 002235799999853 33332 111 11235889999
Q ss_pred hhccCCCcEEEEeccCCCc
Q 045407 264 HALSKKGGIFVMDLYGGTS 282 (382)
Q Consensus 264 ~~L~~pGGiFVfDl~gg~s 282 (382)
+.|+ |||.||+.++.+..
T Consensus 142 ~~Lk-pgG~lv~~~~~~~~ 159 (201)
T 2plw_A 142 QYIN-IGGTYIVKMYLGSQ 159 (201)
T ss_dssp HHEE-EEEEEEEEEECSTT
T ss_pred HHcc-CCCEEEEEEeCCCC
Confidence 9999 99999998876543
No 211
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.17 E-value=6.5e-11 Score=105.56 Aligned_cols=107 Identities=14% Similarity=0.095 Sum_probs=77.0
Q ss_pred CCcccccCCCccHhHHHHHHhC-----CCCeEEEEeCCHHHHHHHHHhccccccC--CCCcceEEEeccCCCchhhhhcc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-----SRRTAVGLDLDLEALEWCMENNLNKVGA--DGYSRISLFHGNVLQPLEAKLVR 186 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-----~~~tVvGVDLS~emL~~A~e~~~~kl~~--d~~~RI~l~~gDV~~~~~~~~~~ 186 (382)
..+|||+|||||.++..+++.. +..+|+|+|+|++|++.|+++... .+- -...++.++++|+.+.... .
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~-~-- 156 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKR-DKPELLKIDNFKIIHKNIYQVNEE-E-- 156 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHH-HCGGGGSSTTEEEEECCGGGCCHH-H--
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHH-cCccccccCCEEEEECChHhcccc-c--
Confidence 3579999999999999999986 345899999999999999988532 110 0024799999998653200 0
Q ss_pred cchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhc
Q 045407 187 YEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHAL 266 (382)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L 266 (382)
. +...+||+|++.... .. .++.+++.|
T Consensus 157 -----------~--------------------------------~~~~~fD~I~~~~~~-~~---------~~~~~~~~L 183 (227)
T 2pbf_A 157 -----------K--------------------------------KELGLFDAIHVGASA-SE---------LPEILVDLL 183 (227)
T ss_dssp -----------H--------------------------------HHHCCEEEEEECSBB-SS---------CCHHHHHHE
T ss_pred -----------C--------------------------------ccCCCcCEEEECCch-HH---------HHHHHHHhc
Confidence 0 003569999876532 22 247888999
Q ss_pred cCCCcEEEEecc
Q 045407 267 SKKGGIFVMDLY 278 (382)
Q Consensus 267 ~~pGGiFVfDl~ 278 (382)
+ |||++|+-+.
T Consensus 184 k-pgG~lv~~~~ 194 (227)
T 2pbf_A 184 A-ENGKLIIPIE 194 (227)
T ss_dssp E-EEEEEEEEEE
T ss_pred C-CCcEEEEEEc
Confidence 9 9999999775
No 212
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.16 E-value=4.4e-11 Score=106.57 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=76.0
Q ss_pred CCcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccC--CCCcceEEEeccCCCchhhhhcccchh
Q 045407 114 PLHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGA--DGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~--d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..+|||+|||||.++..+++. |+..+|+|+|+|+.|++.|+++... .+. .+..++.++++|+....
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~---------- 146 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK-DDPTLLSSGRVQLVVGDGRMGY---------- 146 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCTHHHHTSSEEEEESCGGGCC----------
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hcccccCCCcEEEEECCcccCc----------
Confidence 357999999999999999988 5656899999999999999987532 110 00237899999986433
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
. ...+||+|++... +.. .++.+++.|+ ||
T Consensus 147 -------~---------------------------------~~~~fD~i~~~~~-~~~---------~~~~~~~~Lk-pg 175 (226)
T 1i1n_A 147 -------A---------------------------------EEAPYDAIHVGAA-APV---------VPQALIDQLK-PG 175 (226)
T ss_dssp -------G---------------------------------GGCCEEEEEECSB-BSS---------CCHHHHHTEE-EE
T ss_pred -------c---------------------------------cCCCcCEEEECCc-hHH---------HHHHHHHhcC-CC
Confidence 0 0356999987653 221 2367889999 99
Q ss_pred cEEEEecc
Q 045407 271 GIFVMDLY 278 (382)
Q Consensus 271 GiFVfDl~ 278 (382)
|++|+-+.
T Consensus 176 G~lv~~~~ 183 (226)
T 1i1n_A 176 GRLILPVG 183 (226)
T ss_dssp EEEEEEES
T ss_pred cEEEEEEe
Confidence 99999764
No 213
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.15 E-value=3.8e-11 Score=112.62 Aligned_cols=101 Identities=9% Similarity=0.065 Sum_probs=78.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.+...+|+|+|+|++|+++|+++... .+..++.++++|+.+++
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~----n~l~~~~~~~~d~~~~~------------- 182 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL----NKLNNVIPILADNRDVE------------- 182 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH----TTCSSEEEEESCGGGCC-------------
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH----cCCCCEEEEECChHHcC-------------
Confidence 3579999999999999999997656899999999999999998532 12236889999986542
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
. ...||+|++-.- . .+...++.+.+.|+ |||++
T Consensus 183 ----~----------------------------------~~~~D~Vi~d~p-~-------~~~~~l~~~~~~Lk-pgG~l 215 (272)
T 3a27_A 183 ----L----------------------------------KDVADRVIMGYV-H-------KTHKFLDKTFEFLK-DRGVI 215 (272)
T ss_dssp ----C----------------------------------TTCEEEEEECCC-S-------SGGGGHHHHHHHEE-EEEEE
T ss_pred ----c----------------------------------cCCceEEEECCc-c-------cHHHHHHHHHHHcC-CCCEE
Confidence 0 246899976432 1 44567888999999 99999
Q ss_pred EEecc
Q 045407 274 VMDLY 278 (382)
Q Consensus 274 VfDl~ 278 (382)
++-.+
T Consensus 216 ~~s~~ 220 (272)
T 3a27_A 216 HYHET 220 (272)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98555
No 214
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.15 E-value=3.5e-10 Score=99.22 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=76.5
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|||+|||||.++..+++.|.. +|+|+|+|+.|++.|+++... .+ .++.++++|+.+++
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~a~~~~~~----~~-~~~~~~~~d~~~~~------------- 110 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAK-EVICVEVDKEAVDVLIENLGE----FK-GKFKVFIGDVSEFN------------- 110 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHTGG----GT-TSEEEEESCGGGCC-------------
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHHHH----cC-CCEEEEECchHHcC-------------
Confidence 457999999999999999999763 799999999999999998632 11 27999999985533
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
..||+|++- -.+.... +.....+++.+.+.| ||++
T Consensus 111 ----------------------------------------~~~D~v~~~-~p~~~~~-~~~~~~~l~~~~~~l---~~~~ 145 (207)
T 1wy7_A 111 ----------------------------------------SRVDIVIMN-PPFGSQR-KHADRPFLLKAFEIS---DVVY 145 (207)
T ss_dssp ----------------------------------------CCCSEEEEC-CCCSSSS-TTTTHHHHHHHHHHC---SEEE
T ss_pred ----------------------------------------CCCCEEEEc-CCCcccc-CCchHHHHHHHHHhc---CcEE
Confidence 368999864 2333332 245567888888887 7888
Q ss_pred EEec
Q 045407 274 VMDL 277 (382)
Q Consensus 274 VfDl 277 (382)
++.+
T Consensus 146 ~~~~ 149 (207)
T 1wy7_A 146 SIHL 149 (207)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8774
No 215
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.15 E-value=6.1e-11 Score=113.78 Aligned_cols=138 Identities=17% Similarity=0.098 Sum_probs=92.5
Q ss_pred chHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhcccc
Q 045407 82 SKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNK 160 (382)
Q Consensus 82 ~~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~k 160 (382)
..+..|..-.-..+...+.+...+. .-....+|||+|||||..+..+++.. ...+|+|+|+|+.||+.|+++...
T Consensus 90 ~~~~~~~~G~~~~qd~~s~l~~~~l---~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~- 165 (315)
T 1ixk_A 90 TSTPEFLTGLIYIQEASSMYPPVAL---DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR- 165 (315)
T ss_dssp GGSHHHHTTSEEECCHHHHHHHHHH---CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-
T ss_pred ccChhHhcceEEEeCHHHHHHHHHh---CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH-
Confidence 3455565543333334444433332 22223579999999999999999874 336899999999999999998532
Q ss_pred ccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEE
Q 045407 161 VGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIIC 240 (382)
Q Consensus 161 l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~ 240 (382)
. +..+|.++++|+.++.. . ...||+|+
T Consensus 166 ~---g~~~v~~~~~D~~~~~~----------------~----------------------------------~~~fD~Il 192 (315)
T 1ixk_A 166 L---GVLNVILFHSSSLHIGE----------------L----------------------------------NVEFDKIL 192 (315)
T ss_dssp H---TCCSEEEESSCGGGGGG----------------G----------------------------------CCCEEEEE
T ss_pred h---CCCeEEEEECChhhccc----------------c----------------------------------cccCCEEE
Confidence 2 22368999999876551 1 34699998
Q ss_pred Ec--cchhcccCChhHH----------------HHHHHHHHhhccCCCcEEEEec
Q 045407 241 AF--NYSCCCLHKRADL----------------VLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 241 af--n~S~~yL~~r~dL----------------~~yFr~V~~~L~~pGGiFVfDl 277 (382)
+- |.+.++++...++ ...++++++.|+ |||++|+..
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lk-pGG~lv~st 246 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLK-PGGILVYST 246 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEe
Confidence 73 4445555433322 588999999999 999999953
No 216
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.15 E-value=1.3e-10 Score=113.70 Aligned_cols=106 Identities=13% Similarity=0.070 Sum_probs=81.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc-hhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP-LEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~-~~~~~~~~~~~~~ 192 (382)
+.+|||+| |||.++..+++.++..+|+|||+|+.||+.|+++... . +..+|.++++|+.++ +
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~-~---g~~~v~~~~~D~~~~l~------------ 235 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANE-I---GYEDIEIFTFDLRKPLP------------ 235 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH-H---TCCCEEEECCCTTSCCC------------
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-c---CCCCEEEEEChhhhhch------------
Confidence 46899999 9999999999998766899999999999999998532 1 222799999999873 2
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCc-
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGG- 271 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGG- 271 (382)
. .....||+|++-. .+.. ..+..+++.++++|+ |||
T Consensus 236 -----~--------------------------------~~~~~fD~Vi~~~-p~~~----~~~~~~l~~~~~~Lk-pgG~ 272 (373)
T 2qm3_A 236 -----D--------------------------------YALHKFDTFITDP-PETL----EAIRAFVGRGIATLK-GPRC 272 (373)
T ss_dssp -----T--------------------------------TTSSCBSEEEECC-CSSH----HHHHHHHHHHHHTBC-STTC
T ss_pred -----h--------------------------------hccCCccEEEECC-CCch----HHHHHHHHHHHHHcc-cCCe
Confidence 0 0024699999742 1111 136899999999999 999
Q ss_pred EEEEeccC
Q 045407 272 IFVMDLYG 279 (382)
Q Consensus 272 iFVfDl~g 279 (382)
++++.+..
T Consensus 273 ~~~~~~~~ 280 (373)
T 2qm3_A 273 AGYFGITR 280 (373)
T ss_dssp EEEEEECT
T ss_pred EEEEEEec
Confidence 66888775
No 217
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.14 E-value=1e-10 Score=101.26 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=73.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCC---------CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE-eccCCCchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR---------RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF-HGNVLQPLEAK 183 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~---------~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~-~gDV~~~~~~~ 183 (382)
..+|||+|||||.++..++++... .+|+|+|+|+.+ . ..++.++ ++|+.++....
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-------~--------~~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-------P--------LEGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-------C--------CTTCEEECSCCTTSHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-------c--------CCCCeEEEeccCCCHHHHH
Confidence 457999999999999999998432 589999999931 1 1257889 99987765211
Q ss_pred hcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEcc---chhcccCChh----HHH
Q 045407 184 LVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFN---YSCCCLHKRA----DLV 256 (382)
Q Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn---~S~~yL~~r~----dL~ 256 (382)
.+ .. . +...+||+|+|.. .+..+..+.. .+.
T Consensus 88 ~~--------~~--~--------------------------------~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~ 125 (196)
T 2nyu_A 88 RI--------LE--V--------------------------------LPGRRADVILSDMAPNATGFRDLDHDRLISLCL 125 (196)
T ss_dssp HH--------HH--H--------------------------------SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHH
T ss_pred HH--------HH--h--------------------------------cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHH
Confidence 00 00 0 1124699999843 2222212211 125
Q ss_pred HHHHHHHhhccCCCcEEEEeccCCC
Q 045407 257 LYFKHVLHALSKKGGIFVMDLYGGT 281 (382)
Q Consensus 257 ~yFr~V~~~L~~pGGiFVfDl~gg~ 281 (382)
..++.+++.|+ |||+||+-++.+.
T Consensus 126 ~~l~~~~~~Lk-pgG~lv~~~~~~~ 149 (196)
T 2nyu_A 126 TLLSVTPDILQ-PGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHHHHHEE-EEEEEEEEECCSG
T ss_pred HHHHHHHHHhc-CCCEEEEEecCCc
Confidence 88999999999 9999999766544
No 218
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.13 E-value=4.7e-11 Score=117.85 Aligned_cols=116 Identities=15% Similarity=0.067 Sum_probs=83.5
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCc--ceEEEeccCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYS--RISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~--RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+|||+|||||.++..+|+.|. .+|+|||+|+.||++|++|... .+.. ++.++++|+.+....
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~----n~~~~~~v~~~~~D~~~~l~~---------- 278 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEA----NHLDMANHQLVVMDVFDYFKY---------- 278 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHH----TTCCCTTEEEEESCHHHHHHH----------
T ss_pred CeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHH----cCCCccceEEEECCHHHHHHH----------
Confidence 4799999999999999999875 3899999999999999998632 1212 799999998664300
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchh----ccc-CChhHHHHHHHHHHhhcc
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSC----CCL-HKRADLVLYFKHVLHALS 267 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~----~yL-~~r~dL~~yFr~V~~~L~ 267 (382)
+.. ...+||+|++---.+ .++ .-..++...++.+.+.|+
T Consensus 279 ---~~~---------------------------------~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~ 322 (385)
T 2b78_A 279 ---ARR---------------------------------HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILS 322 (385)
T ss_dssp ---HHH---------------------------------TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEE
T ss_pred ---HHH---------------------------------hCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcC
Confidence 000 024699998732221 222 233556677889999999
Q ss_pred CCCcEEEEeccCCCc
Q 045407 268 KKGGIFVMDLYGGTS 282 (382)
Q Consensus 268 ~pGGiFVfDl~gg~s 282 (382)
|||++++.....+.
T Consensus 323 -pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 323 -ENGLIIASTNAANM 336 (385)
T ss_dssp -EEEEEEEEECCTTS
T ss_pred -CCcEEEEEeCCCcC
Confidence 99999998875543
No 219
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.13 E-value=1.1e-11 Score=112.77 Aligned_cols=62 Identities=6% Similarity=-0.135 Sum_probs=50.8
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
+.+|||+|||||.++..++++.+..+|+|+|+|+.||+.|+++... .+ -..+|.++++|+.+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~--~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQ-NN--LSDLIKVVKVPQKT 127 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH-TT--CTTTEEEEECCTTC
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH-cC--CCccEEEEEcchhh
Confidence 4579999999999999999885556899999999999999998532 11 12369999999866
No 220
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.11 E-value=1.3e-10 Score=108.82 Aligned_cols=112 Identities=12% Similarity=-0.027 Sum_probs=78.7
Q ss_pred CcccccCCCccHhHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
.+|||+|||||..+..+++.-.. .+|+|+|+|+.||+.++++... . +..++.++++|+.++...
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~-~---g~~~v~~~~~D~~~~~~~----------- 149 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR-M---GVLNTIIINADMRKYKDY----------- 149 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH-T---TCCSEEEEESCHHHHHHH-----------
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH-h---CCCcEEEEeCChHhcchh-----------
Confidence 47999999999999999985332 5899999999999999987532 2 223799999998765410
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc--cchhcccCCh------------hHHHHHH
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF--NYSCCCLHKR------------ADLVLYF 259 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af--n~S~~yL~~r------------~dL~~yF 259 (382)
+. .....||+|++- |.+.+.+... ......+
T Consensus 150 ----~~-------------------------------~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l 194 (274)
T 3ajd_A 150 ----LL-------------------------------KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELI 194 (274)
T ss_dssp ----HH-------------------------------HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHH
T ss_pred ----hh-------------------------------hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHH
Confidence 00 003469999875 3344443311 3447889
Q ss_pred HHHHhhccCCCcEEEEec
Q 045407 260 KHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 260 r~V~~~L~~pGGiFVfDl 277 (382)
+++++.|+ |||++|+-.
T Consensus 195 ~~~~~~Lk-pgG~lv~st 211 (274)
T 3ajd_A 195 DIGIDLLK-KDGELVYST 211 (274)
T ss_dssp HHHHHHEE-EEEEEEEEE
T ss_pred HHHHHhCC-CCCEEEEEE
Confidence 99999999 999999954
No 221
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.10 E-value=4.3e-11 Score=112.84 Aligned_cols=100 Identities=8% Similarity=0.009 Sum_probs=77.0
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc-CCCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG-ADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~-~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..|.+|||+|||+|.++.++++. . .+|++||+|++|+++|+++... +. .-...|+.++.+|.++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~-~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPH-FHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTT-HHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHh-hccccCCCeEEEEechHHHHH----------
Confidence 34678999999999999999998 4 6999999999999999986421 10 001248999999874321
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
.+||+|++-. .++ ..+|+.++++|+ ||
T Consensus 138 -------------------------------------------~~fD~Ii~d~------~dp---~~~~~~~~~~L~-pg 164 (262)
T 2cmg_A 138 -------------------------------------------KKYDLIFCLQ------EPD---IHRIDGLKRMLK-ED 164 (262)
T ss_dssp -------------------------------------------CCEEEEEESS------CCC---HHHHHHHHTTEE-EE
T ss_pred -------------------------------------------hhCCEEEECC------CCh---HHHHHHHHHhcC-CC
Confidence 5699999752 232 238999999999 99
Q ss_pred cEEEEec
Q 045407 271 GIFVMDL 277 (382)
Q Consensus 271 GiFVfDl 277 (382)
|+||+..
T Consensus 165 G~lv~~~ 171 (262)
T 2cmg_A 165 GVFISVA 171 (262)
T ss_dssp EEEEEEE
T ss_pred cEEEEEc
Confidence 9999964
No 222
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.10 E-value=2.9e-10 Score=106.20 Aligned_cols=104 Identities=9% Similarity=-0.019 Sum_probs=74.0
Q ss_pred CcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
.+|||+|||||.++..+++. |+..+|+|||+|+.||+...+.+.. ..+|.++++|++.+....
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~---------- 141 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYK---------- 141 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTT----------
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhh----------
Confidence 57999999999999999976 5567999999999997654443321 136899999998775100
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
...+.||+|++-. +. ........+.+.+.|+ |||.|
T Consensus 142 -------------------------------------~~~~~~D~I~~d~-a~-----~~~~~il~~~~~~~Lk-pGG~l 177 (232)
T 3id6_C 142 -------------------------------------SVVENVDVLYVDI-AQ-----PDQTDIAIYNAKFFLK-VNGDM 177 (232)
T ss_dssp -------------------------------------TTCCCEEEEEECC-CC-----TTHHHHHHHHHHHHEE-EEEEE
T ss_pred -------------------------------------ccccceEEEEecC-CC-----hhHHHHHHHHHHHhCC-CCeEE
Confidence 0035799998753 21 2233334456666999 99999
Q ss_pred EEecc
Q 045407 274 VMDLY 278 (382)
Q Consensus 274 VfDl~ 278 (382)
|+-+.
T Consensus 178 visik 182 (232)
T 3id6_C 178 LLVIK 182 (232)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99764
No 223
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.09 E-value=3.9e-10 Score=106.76 Aligned_cols=75 Identities=16% Similarity=0.105 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCC-CcceEEEeccCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADG-YSRISLFHGNVL 177 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~-~~RI~l~~gDV~ 177 (382)
..+.++... .+-....+|||+|||||.++..|++++. +|+|||+|+.|++.|+++... .+ ..++.++++|+.
T Consensus 15 ~i~~~i~~~-~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~----~~~~~~v~~~~~D~~ 87 (285)
T 1zq9_A 15 LIINSIIDK-AALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQG----TPVASKLQVLVGDVL 87 (285)
T ss_dssp HHHHHHHHH-TCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTT----STTGGGEEEEESCTT
T ss_pred HHHHHHHHh-cCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHh----cCCCCceEEEEccee
Confidence 344444443 3333346799999999999999999985 799999999999999997521 11 147999999997
Q ss_pred Cch
Q 045407 178 QPL 180 (382)
Q Consensus 178 ~~~ 180 (382)
+++
T Consensus 88 ~~~ 90 (285)
T 1zq9_A 88 KTD 90 (285)
T ss_dssp TSC
T ss_pred ccc
Confidence 765
No 224
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.08 E-value=5.4e-10 Score=109.54 Aligned_cols=63 Identities=17% Similarity=0.232 Sum_probs=53.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCC-cceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGY-SRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~-~RI~l~~gDV~~~~ 180 (382)
...|||+|||||.+++++++.+...+|+|+|+|+.||+.|+++... .+. .+|.++++|+.+++
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~----~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALA----AGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHH----TTCGGGCEEEECCGGGGG
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHH----cCCCCceEEEECChhhCC
Confidence 3469999999999999999999755799999999999999998633 121 47999999998766
No 225
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.07 E-value=3.4e-10 Score=108.98 Aligned_cols=121 Identities=15% Similarity=0.211 Sum_probs=86.6
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCC-----CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEe
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSR-----RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFH 173 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~-----~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~ 173 (382)
.++..++........+.+|||+|||||.++..+++..+. .+++|+|+|+.|++.|+.+.... + .++.+++
T Consensus 116 ~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~----g-~~~~i~~ 190 (344)
T 2f8l_A 116 FIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ----R-QKMTLLH 190 (344)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH----T-CCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC----C-CCceEEE
Confidence 444444443222223468999999999999999988643 57999999999999999975321 1 2678999
Q ss_pred ccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh
Q 045407 174 GNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA 253 (382)
Q Consensus 174 gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~ 253 (382)
+|.+.+. ...+||+|++- --|+|+...+
T Consensus 191 ~D~l~~~---------------------------------------------------~~~~fD~Ii~N-PPfg~~~~~~ 218 (344)
T 2f8l_A 191 QDGLANL---------------------------------------------------LVDPVDVVISD-LPVGYYPDDE 218 (344)
T ss_dssp SCTTSCC---------------------------------------------------CCCCEEEEEEE-CCCSEESCHH
T ss_pred CCCCCcc---------------------------------------------------ccCCccEEEEC-CCCCCcCchh
Confidence 9986543 13569998874 3455654322
Q ss_pred H--------------H-HHHHHHHHhhccCCCcEEEEec
Q 045407 254 D--------------L-VLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 254 d--------------L-~~yFr~V~~~L~~pGGiFVfDl 277 (382)
. . ...+.++.+.|+ |||++++-+
T Consensus 219 ~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk-~gG~~~~v~ 256 (344)
T 2f8l_A 219 NAKTFELCREEGHSFAHFLFIEQGMRYTK-PGGYLFFLV 256 (344)
T ss_dssp HHTTSTTCCSSSCEEHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred hhhhccccCCCCcchHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 1 1 368999999999 999999976
No 226
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.07 E-value=2.7e-10 Score=121.29 Aligned_cols=112 Identities=17% Similarity=0.135 Sum_probs=83.9
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.+++.+++.|. .+|+|||+|+.||++|++|... .+- ...++.++++|+.++..
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~-ngl-~~~~v~~i~~D~~~~l~------------- 604 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRL-NGL-TGRAHRLIQADCLAWLR------------- 604 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHH-TTC-CSTTEEEEESCHHHHHH-------------
T ss_pred CcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHH-cCC-CccceEEEecCHHHHHH-------------
Confidence 3699999999999999999886 4799999999999999998532 111 11379999999876431
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc-------ccCChhHHHHHHHHHHhhcc
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC-------CLHKRADLVLYFKHVLHALS 267 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~-------yL~~r~dL~~yFr~V~~~L~ 267 (382)
. ...+||+|++---++. -+.-..+....++.+.+.|+
T Consensus 605 ---~---------------------------------~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lk 648 (703)
T 3v97_A 605 ---E---------------------------------ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR 648 (703)
T ss_dssp ---H---------------------------------CCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEE
T ss_pred ---h---------------------------------cCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcC
Confidence 0 0357999987332211 12233577888999999999
Q ss_pred CCCcEEEEeccC
Q 045407 268 KKGGIFVMDLYG 279 (382)
Q Consensus 268 ~pGGiFVfDl~g 279 (382)
|||++++....
T Consensus 649 -pgG~L~~s~~~ 659 (703)
T 3v97_A 649 -AGGTIMFSNNK 659 (703)
T ss_dssp -EEEEEEEEECC
T ss_pred -CCcEEEEEECC
Confidence 99999998764
No 227
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.06 E-value=3.5e-10 Score=105.67 Aligned_cols=105 Identities=12% Similarity=0.055 Sum_probs=81.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|+|+|||||.+++.+++.++..+|+|+|+|+.+|+.|++|... .+- ..+|.++++|..+..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~-~gl--~~~i~~~~~d~l~~l-------------- 79 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEA-HGL--KEKIQVRLANGLAAF-------------- 79 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH-TTC--TTTEEEEECSGGGGC--------------
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CceEEEEECchhhhc--------------
Confidence 479999999999999999999877899999999999999998532 221 237999999985433
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCC-CccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLP-ARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
..+ +||+|+..+ ++ -.-+...+..+...|+ ++|.|
T Consensus 80 -------------------------------------~~~~~~D~IviaG--~G----g~~i~~Il~~~~~~L~-~~~~l 115 (225)
T 3kr9_A 80 -------------------------------------EETDQVSVITIAG--MG----GRLIARILEEGLGKLA-NVERL 115 (225)
T ss_dssp -------------------------------------CGGGCCCEEEEEE--EC----HHHHHHHHHHTGGGCT-TCCEE
T ss_pred -------------------------------------ccCcCCCEEEEcC--CC----hHHHHHHHHHHHHHhC-CCCEE
Confidence 122 599888643 12 1346788999999999 99999
Q ss_pred EEeccCC
Q 045407 274 VMDLYGG 280 (382)
Q Consensus 274 VfDl~gg 280 (382)
|+--..+
T Consensus 116 Vlq~~~~ 122 (225)
T 3kr9_A 116 ILQPNNR 122 (225)
T ss_dssp EEEESSC
T ss_pred EEECCCC
Confidence 9955443
No 228
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.05 E-value=4.4e-10 Score=107.33 Aligned_cols=107 Identities=16% Similarity=0.090 Sum_probs=79.2
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.|.+|||+|||+|.|+..|+ +..+++|+|||+.|+++|+++... .+.+..+.++|+...+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~-----~g~~~~~~v~D~~~~~------------ 164 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFARE-----KDWDFTFALQDVLCAP------------ 164 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHH-----TTCEEEEEECCTTTSC------------
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHh-----cCCCceEEEeecccCC------------
Confidence 47899999999999999999 446899999999999999998422 2357889999986555
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
+ .+++|+|+++- ++-||..... ...| .+.+.|+ ++|+
T Consensus 165 -----~----------------------------------~~~~DvvLllk-~lh~LE~q~~-~~~~-~ll~aL~-~~~v 201 (253)
T 3frh_A 165 -----P----------------------------------AEAGDLALIFK-LLPLLEREQA-GSAM-ALLQSLN-TPRM 201 (253)
T ss_dssp -----C----------------------------------CCBCSEEEEES-CHHHHHHHST-THHH-HHHHHCB-CSEE
T ss_pred -----C----------------------------------CCCcchHHHHH-HHHHhhhhch-hhHH-HHHHHhc-CCCE
Confidence 1 46799999985 5555654333 2344 8888999 9999
Q ss_pred EEE-e--ccCCCc
Q 045407 273 FVM-D--LYGGTS 282 (382)
Q Consensus 273 FVf-D--l~gg~s 282 (382)
||- + -.+|.+
T Consensus 202 vVsfPtksl~Gr~ 214 (253)
T 3frh_A 202 AVSFPTRSLGGRG 214 (253)
T ss_dssp EEEEECC------
T ss_pred EEEcChHHhcCCC
Confidence 996 7 344433
No 229
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.05 E-value=2.7e-10 Score=102.24 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=75.5
Q ss_pred CcccccCCCccHhHHHHHHhCC------CCeEEEEeCCHHHHHHHHHhccccccC--CCCcceEEEeccCCCchhhhhcc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDS------RRTAVGLDLDLEALEWCMENNLNKVGA--DGYSRISLFHGNVLQPLEAKLVR 186 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~------~~tVvGVDLS~emL~~A~e~~~~kl~~--d~~~RI~l~~gDV~~~~~~~~~~ 186 (382)
.+|||+|||||.++..|++... ..+|+|+|+|++|++.|+++... .+. -...++.++++|+.++.
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~------ 158 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT-DDRSMLDSGQLLIVEGDGRKGY------ 158 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHH-HHHHHHHHTSEEEEESCGGGCC------
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHh-cCccccCCCceEEEECCcccCC------
Confidence 5799999999999999998532 24799999999999999987532 110 00237899999986532
Q ss_pred cchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhc
Q 045407 187 YEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHAL 266 (382)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L 266 (382)
. ...+||+|++... +.++. +.+++.|
T Consensus 159 -----------~---------------------------------~~~~fD~I~~~~~-~~~~~---------~~~~~~L 184 (227)
T 1r18_A 159 -----------P---------------------------------PNAPYNAIHVGAA-APDTP---------TELINQL 184 (227)
T ss_dssp -----------G---------------------------------GGCSEEEEEECSC-BSSCC---------HHHHHTE
T ss_pred -----------C---------------------------------cCCCccEEEECCc-hHHHH---------HHHHHHh
Confidence 0 0256999987653 33322 6788999
Q ss_pred cCCCcEEEEeccC
Q 045407 267 SKKGGIFVMDLYG 279 (382)
Q Consensus 267 ~~pGGiFVfDl~g 279 (382)
+ |||++|+-+..
T Consensus 185 k-pgG~lvi~~~~ 196 (227)
T 1r18_A 185 A-SGGRLIVPVGP 196 (227)
T ss_dssp E-EEEEEEEEESC
T ss_pred c-CCCEEEEEEec
Confidence 9 99999998864
No 230
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.02 E-value=6.5e-10 Score=104.27 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=82.1
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|+|+|||||.+++.+++.|+..+|+|+|+|+.||+.|++|... .+- ..+|.+.++|..++..
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~-~gl--~~~I~~~~gD~l~~~~------------- 86 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE-HGL--TSKIDVRLANGLSAFE------------- 86 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH-TTC--TTTEEEEECSGGGGCC-------------
T ss_pred CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEECchhhccc-------------
Confidence 479999999999999999999877899999999999999998532 221 2479999999876540
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
+..+||+|+..+ ++ -.-+...+..+...|+ ++|.||
T Consensus 87 -------------------------------------~~~~~D~IviaG--mG----g~lI~~IL~~~~~~l~-~~~~lI 122 (230)
T 3lec_A 87 -------------------------------------EADNIDTITICG--MG----GRLIADILNNDIDKLQ-HVKTLV 122 (230)
T ss_dssp -------------------------------------GGGCCCEEEEEE--EC----HHHHHHHHHHTGGGGT-TCCEEE
T ss_pred -------------------------------------cccccCEEEEeC--Cc----hHHHHHHHHHHHHHhC-cCCEEE
Confidence 012699987643 22 1457778888999998 999999
Q ss_pred EeccCC
Q 045407 275 MDLYGG 280 (382)
Q Consensus 275 fDl~gg 280 (382)
+-=+.+
T Consensus 123 lqp~~~ 128 (230)
T 3lec_A 123 LQPNNR 128 (230)
T ss_dssp EEESSC
T ss_pred EECCCC
Confidence 955444
No 231
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.02 E-value=2.5e-10 Score=110.33 Aligned_cols=109 Identities=17% Similarity=0.235 Sum_probs=84.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
|..|||+|||+|.||..|+...+..+++|+|+|+.||+.++++... .+.+..+.++|+....
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~-----~g~~~~~~v~D~~~~~------------- 194 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTR-----LNVPHRTNVADLLEDR------------- 194 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHH-----TTCCEEEEECCTTTSC-------------
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHh-----cCCCceEEEeeecccC-------------
Confidence 8899999999999999999998889999999999999999998522 2346788888876544
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEE
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIF 273 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiF 273 (382)
+ .+++|+|+++- ++-||.+... ...| .++++|+ ++|+|
T Consensus 195 ----p----------------------------------~~~~DvaL~lk-ti~~Le~q~k-g~g~-~ll~aL~-~~~vv 232 (281)
T 3lcv_B 195 ----L----------------------------------DEPADVTLLLK-TLPCLETQQR-GSGW-EVIDIVN-SPNIV 232 (281)
T ss_dssp ----C----------------------------------CSCCSEEEETT-CHHHHHHHST-THHH-HHHHHSS-CSEEE
T ss_pred ----C----------------------------------CCCcchHHHHH-HHHHhhhhhh-HHHH-HHHHHhC-CCCEE
Confidence 1 56799999986 6666654433 3445 8999999 99999
Q ss_pred EE-ec--cCCCc
Q 045407 274 VM-DL--YGGTS 282 (382)
Q Consensus 274 Vf-Dl--~gg~s 282 (382)
|- |. .+|.+
T Consensus 233 VSfp~ksl~Grs 244 (281)
T 3lcv_B 233 VTFPTKSLGQRS 244 (281)
T ss_dssp EEEECC------
T ss_pred EeccchhhcCCC
Confidence 97 87 56654
No 232
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.00 E-value=8.5e-10 Score=108.34 Aligned_cols=116 Identities=17% Similarity=0.122 Sum_probs=81.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCc-ceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYS-RISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~-RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||.++..+++.|. .+|+|+|+|+.||++|+++... .+-. ++.++++|+.+.... .
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~-~~v~~vD~s~~~l~~a~~n~~~----n~~~~~v~~~~~d~~~~~~~-~-------- 283 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGA-DEVIGIDKSPRAIETAKENAKL----NGVEDRMKFIVGSAFEEMEK-L-------- 283 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHH----TTCGGGEEEEESCHHHHHHH-H--------
T ss_pred CCeEEEecCCCCHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHH----cCCCccceEEECCHHHHHHH-H--------
Confidence 35799999999999999999874 4899999999999999998632 1212 799999998665310 0
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc-----ccCChhHHHHHHHHHHhhcc
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC-----CLHKRADLVLYFKHVLHALS 267 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~-----yL~~r~dL~~yFr~V~~~L~ 267 (382)
.. ...+||+|++---.+. .+.-..+....++.+.+.|+
T Consensus 284 ----~~---------------------------------~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 284 ----QK---------------------------------KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp ----HH---------------------------------TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE
T ss_pred ----Hh---------------------------------hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0246999987321110 01111567788999999999
Q ss_pred CCCcEEEEeccCCC
Q 045407 268 KKGGIFVMDLYGGT 281 (382)
Q Consensus 268 ~pGGiFVfDl~gg~ 281 (382)
|||++++-....+
T Consensus 327 -pgG~lv~~~~~~~ 339 (396)
T 2as0_A 327 -DGGILVTCSCSQH 339 (396)
T ss_dssp -EEEEEEEEECCTT
T ss_pred -CCcEEEEEECCCC
Confidence 9999888555433
No 233
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.00 E-value=9.4e-10 Score=104.11 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=83.2
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|+|+|||||.+++.+++.++..+|+|+|+|+.+|+.|++|... .+- ..+|.+.++|..++..
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~-~gl--~~~I~v~~gD~l~~~~------------- 86 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRS-SGL--TEQIDVRKGNGLAVIE------------- 86 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH-TTC--TTTEEEEECSGGGGCC-------------
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCC--CceEEEEecchhhccC-------------
Confidence 479999999999999999999867899999999999999998532 111 2479999999866540
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
...+||+|+..+ ++ -+-+...+..+...|+ ++|.||
T Consensus 87 -------------------------------------~~~~~D~Iviag--mG----g~lI~~IL~~~~~~L~-~~~~lI 122 (244)
T 3gnl_A 87 -------------------------------------KKDAIDTIVIAG--MG----GTLIRTILEEGAAKLA-GVTKLI 122 (244)
T ss_dssp -------------------------------------GGGCCCEEEEEE--EC----HHHHHHHHHHTGGGGT-TCCEEE
T ss_pred -------------------------------------ccccccEEEEeC--Cc----hHHHHHHHHHHHHHhC-CCCEEE
Confidence 012599988632 22 1457788889999998 899999
Q ss_pred EeccCCCch
Q 045407 275 MDLYGGTSS 283 (382)
Q Consensus 275 fDl~gg~s~ 283 (382)
+-=..+...
T Consensus 123 lq~~~~~~~ 131 (244)
T 3gnl_A 123 LQPNIAAWQ 131 (244)
T ss_dssp EEESSCHHH
T ss_pred EEcCCChHH
Confidence 965544433
No 234
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.98 E-value=6.4e-10 Score=109.38 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=84.0
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCC-c-ceEEEeccCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGY-S-RISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~-~-RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+|||+|||||.++..+++.|. ..|+|||+|+.||++|+++... .+. . ++.++++|+.++... .
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~-~~V~~vD~s~~al~~a~~n~~~----ngl~~~~v~~~~~D~~~~~~~-~-------- 287 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC-SQVVSVDTSQEALDIARQNVEL----NKLDLSKAEFVRDDVFKLLRT-Y-------- 287 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHH----TTCCGGGEEEEESCHHHHHHH-H--------
T ss_pred CeEEEeeccCCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHH----cCCCccceEEEECCHHHHHHH-H--------
Confidence 4799999999999999999874 4899999999999999998532 121 2 799999998665310 0
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchh-----cccCChhHHHHHHHHHHhhcc
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSC-----CCLHKRADLVLYFKHVLHALS 267 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~-----~yL~~r~dL~~yFr~V~~~L~ 267 (382)
.. ...+||+|++--=.+ ....-...+...+..+.+.|+
T Consensus 288 ----~~---------------------------------~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 330 (396)
T 3c0k_A 288 ----RD---------------------------------RGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLN 330 (396)
T ss_dssp ----HH---------------------------------TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEE
T ss_pred ----Hh---------------------------------cCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC
Confidence 00 024689988732111 011222577889999999999
Q ss_pred CCCcEEEEeccCCCc
Q 045407 268 KKGGIFVMDLYGGTS 282 (382)
Q Consensus 268 ~pGGiFVfDl~gg~s 282 (382)
|||++++-.+.++.
T Consensus 331 -pgG~l~~~~~~~~~ 344 (396)
T 3c0k_A 331 -EGGILLTFSCSGLM 344 (396)
T ss_dssp -EEEEEEEEECCTTC
T ss_pred -CCcEEEEEeCCCcC
Confidence 99999997765543
No 235
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.96 E-value=2.9e-09 Score=106.94 Aligned_cols=109 Identities=10% Similarity=0.026 Sum_probs=81.1
Q ss_pred CcccccCCCccHhHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
.+|||+|||+|..+..+++.-.. .+|+|+|+|+.+|+.++++... . +..+|.++++|+.++..
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~-~---g~~~v~~~~~D~~~~~~------------ 324 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR-M---GIKIVKPLVKDARKAPE------------ 324 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-T---TCCSEEEECSCTTCCSS------------
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH-c---CCCcEEEEEcChhhcch------------
Confidence 47999999999999999987443 5899999999999999988532 2 22468999999876540
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc--cchhcccCChhHH----------------
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF--NYSCCCLHKRADL---------------- 255 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af--n~S~~yL~~r~dL---------------- 255 (382)
.+....||+|++- |.+.+.++...++
T Consensus 325 ------------------------------------~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q 368 (450)
T 2yxl_A 325 ------------------------------------IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQ 368 (450)
T ss_dssp ------------------------------------SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHH
T ss_pred ------------------------------------hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHH
Confidence 0112569999862 3344444433332
Q ss_pred HHHHHHHHhhccCCCcEEEEe
Q 045407 256 VLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 256 ~~yFr~V~~~L~~pGGiFVfD 276 (382)
...++++++.|+ |||++|+-
T Consensus 369 ~~iL~~a~~~Lk-pGG~lvy~ 388 (450)
T 2yxl_A 369 RELLESAARLVK-PGGRLLYT 388 (450)
T ss_dssp HHHHHHHHTTEE-EEEEEEEE
T ss_pred HHHHHHHHHhcC-CCcEEEEE
Confidence 678999999999 99999984
No 236
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.96 E-value=5.9e-10 Score=111.14 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=74.9
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.+|+.+|+.|. .|+|||+|+.||++|++|... .+ ....+.++|+.++..
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~-ng----~~~~~~~~D~~~~l~------------- 275 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALR-LG----LRVDIRHGEALPTLR------------- 275 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-HT----CCCEEEESCHHHHHH-------------
T ss_pred CeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHH-hC----CCCcEEEccHHHHHH-------------
Confidence 4799999999999999999986 499999999999999998532 11 123466888865431
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCC-------hhHHHHHHHHHHhhcc
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHK-------RADLVLYFKHVLHALS 267 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~-------r~dL~~yFr~V~~~L~ 267 (382)
. + .+.||+|++--- ++-.+ ..+....++.+.+.|+
T Consensus 276 ---~--------------------------------~-~~~fD~Ii~dpP--~f~~~~~~~~~~~~~~~~ll~~a~~~Lk 317 (393)
T 4dmg_A 276 ---G--------------------------------L-EGPFHHVLLDPP--TLVKRPEELPAMKRHLVDLVREALRLLA 317 (393)
T ss_dssp ---T--------------------------------C-CCCEEEEEECCC--CCCSSGGGHHHHHHHHHHHHHHHHHTEE
T ss_pred ---H--------------------------------h-cCCCCEEEECCC--cCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 1 233999986321 11111 2355678889999999
Q ss_pred CCCcEEEE-ecc
Q 045407 268 KKGGIFVM-DLY 278 (382)
Q Consensus 268 ~pGGiFVf-Dl~ 278 (382)
|||++++ .+.
T Consensus 318 -pGG~Lv~~s~s 328 (393)
T 4dmg_A 318 -EEGFLWLSSCS 328 (393)
T ss_dssp -EEEEEEEEECC
T ss_pred -CCCEEEEEECC
Confidence 9999996 443
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.94 E-value=1.1e-09 Score=107.36 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=81.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||||.++..+++.+ .+|+|+|+|+.||++|+++... .+...+.++++|+.++... .
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~----n~~~~~~~~~~d~~~~~~~-~--------- 273 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARL----NGLGNVRVLEANAFDLLRR-L--------- 273 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHH----TTCTTEEEEESCHHHHHHH-H---------
T ss_pred CCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHH----cCCCCceEEECCHHHHHHH-H---------
Confidence 3579999999999999999984 4799999999999999998532 1222489999998665410 0
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc-----ccCChhHHHHHHHHHHhhccC
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC-----CLHKRADLVLYFKHVLHALSK 268 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~-----yL~~r~dL~~yFr~V~~~L~~ 268 (382)
.. ...+||+|++---.+. ...-.......++.+.+.|+
T Consensus 274 ---~~---------------------------------~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk- 316 (382)
T 1wxx_A 274 ---EK---------------------------------EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLK- 316 (382)
T ss_dssp ---HH---------------------------------TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEE-
T ss_pred ---Hh---------------------------------cCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-
Confidence 00 0246899987211100 00112566788999999999
Q ss_pred CCcEEEEeccCCCc
Q 045407 269 KGGIFVMDLYGGTS 282 (382)
Q Consensus 269 pGGiFVfDl~gg~s 282 (382)
|||++++-....+.
T Consensus 317 pgG~l~~~~~~~~~ 330 (382)
T 1wxx_A 317 EGGILATASCSHHM 330 (382)
T ss_dssp EEEEEEEEECCTTS
T ss_pred CCCEEEEEECCCCC
Confidence 99999997665443
No 238
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.94 E-value=6.9e-09 Score=95.95 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
+-..+.++... .+-....+|||+|||||.++..|++++ .+|+|||+|+.|++.|+++... ..++.++++|+
T Consensus 15 d~~~~~~i~~~-~~~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~ 85 (244)
T 1qam_A 15 SKHNIDKIMTN-IRLNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDI 85 (244)
T ss_dssp CHHHHHHHHTT-CCCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCG
T ss_pred CHHHHHHHHHh-CCCCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChH
Confidence 33445555543 333334679999999999999999998 4799999999999999998521 24799999999
Q ss_pred CCch
Q 045407 177 LQPL 180 (382)
Q Consensus 177 ~~~~ 180 (382)
.+++
T Consensus 86 ~~~~ 89 (244)
T 1qam_A 86 LQFK 89 (244)
T ss_dssp GGCC
T ss_pred HhCC
Confidence 7765
No 239
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.93 E-value=1.7e-09 Score=107.84 Aligned_cols=117 Identities=9% Similarity=-0.008 Sum_probs=81.9
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC----C-CCcceEEEeccCCCchhhhhccc
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA----D-GYSRISLFHGNVLQPLEAKLVRY 187 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~----d-~~~RI~l~~gDV~~~~~~~~~~~ 187 (382)
.|.+||++|||+|.++.++++.++ .+|++||+|+.++++|+++... +.. + ...|+.++++|.+++...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~-l~~~~l~dp~~~rv~vi~~Da~~~L~~----- 260 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRK-TCGDVLDNLKGDCYQVLIEDCIPVLKR----- 260 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC-----CCSSSEETTEEEEESCHHHHHHH-----
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHH-hccccccccCCCcEEEEECcHHHHHHh-----
Confidence 478999999999999999999987 6899999999999999998532 211 0 012799999998775510
Q ss_pred chhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccch--h----cccCChhHHHHHHHH
Q 045407 188 EPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYS--C----CCLHKRADLVLYFKH 261 (382)
Q Consensus 188 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S--~----~yL~~r~dL~~yFr~ 261 (382)
+.- ...+||+|+.=.+. + ..|.+.+-...+++.
T Consensus 261 --------~~~---------------------------------~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~ 299 (364)
T 2qfm_A 261 --------YAK---------------------------------EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL 299 (364)
T ss_dssp --------HHH---------------------------------HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH
T ss_pred --------hhc---------------------------------cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHH
Confidence 000 03569999875432 1 123333444555555
Q ss_pred HHhhccCCCcEEEEecc
Q 045407 262 VLHALSKKGGIFVMDLY 278 (382)
Q Consensus 262 V~~~L~~pGGiFVfDl~ 278 (382)
++++|+ |||+|++...
T Consensus 300 ~~~~L~-pgGilv~qs~ 315 (364)
T 2qfm_A 300 SMKVLK-QDGKYFTQGN 315 (364)
T ss_dssp HHHTEE-EEEEEEEEEE
T ss_pred HHhhCC-CCcEEEEEcC
Confidence 599999 9999999754
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.92 E-value=5.5e-09 Score=101.04 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=71.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+|||+|||||.++.. ++.+ .+|+|+|+|+.|+++|++|... .+- ..++.++++|+.++.
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~--~~V~~vD~s~~ai~~a~~n~~~-n~l--~~~v~~~~~D~~~~~-------------- 256 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNA--KKIYAIDINPHAIELLKKNIKL-NKL--EHKIIPILSDVREVD-------------- 256 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTS--SEEEEEESCHHHHHHHHHHHHH-TTC--TTTEEEEESCGGGCC--------------
T ss_pred CEEEEccCccCHHHHh-ccCC--CEEEEEECCHHHHHHHHHHHHH-cCC--CCcEEEEECChHHhc--------------
Confidence 4799999999999999 8833 5899999999999999998532 111 137999999985321
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
..||+|++---.+ ...+++.+.+.|+ |||+++
T Consensus 257 ---------------------------------------~~fD~Vi~dpP~~--------~~~~l~~~~~~L~-~gG~l~ 288 (336)
T 2yx1_A 257 ---------------------------------------VKGNRVIMNLPKF--------AHKFIDKALDIVE-EGGVIH 288 (336)
T ss_dssp ---------------------------------------CCEEEEEECCTTT--------GGGGHHHHHHHEE-EEEEEE
T ss_pred ---------------------------------------CCCcEEEECCcHh--------HHHHHHHHHHHcC-CCCEEE
Confidence 4689998731111 1267888999999 999988
Q ss_pred Ee
Q 045407 275 MD 276 (382)
Q Consensus 275 fD 276 (382)
+-
T Consensus 289 ~~ 290 (336)
T 2yx1_A 289 YY 290 (336)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 241
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.92 E-value=2.8e-09 Score=101.67 Aligned_cols=62 Identities=19% Similarity=0.389 Sum_probs=47.6
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
...+|||+|||||.++..|++++. +|+|||+|+.|++.|+++... .+..++.++++|+.+++
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~----~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLY----EGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHH----TTCCCEEC----CCSSC
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHH----cCCCceEEEECchhhCC
Confidence 346799999999999999999874 799999999999999987521 12247999999997665
No 242
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.92 E-value=6e-09 Score=98.18 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
|-..+.++... ++-....+|||+|||||.++..|++++ .+|+|||+|++|++.|+++... ..++.++++|+
T Consensus 14 d~~i~~~iv~~-~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~ 84 (255)
T 3tqs_A 14 DSFVLQKIVSA-IHPQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDA 84 (255)
T ss_dssp CHHHHHHHHHH-HCCCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCT
T ss_pred CHHHHHHHHHh-cCCCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcch
Confidence 33444444443 333334579999999999999999998 4799999999999999998521 35899999999
Q ss_pred CCch
Q 045407 177 LQPL 180 (382)
Q Consensus 177 ~~~~ 180 (382)
.+++
T Consensus 85 ~~~~ 88 (255)
T 3tqs_A 85 LQFD 88 (255)
T ss_dssp TTCC
T ss_pred HhCC
Confidence 9887
No 243
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.89 E-value=2.2e-09 Score=106.94 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=81.5
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
..+|||+|||+|..+..+++.++..+|+|+|+|+.+|+.++++... . +.++.++++|+.++..
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~-~----g~~~~~~~~D~~~~~~------------ 309 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR-L----GMKATVKQGDGRYPSQ------------ 309 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHH-T----TCCCEEEECCTTCTHH------------
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHH-c----CCCeEEEeCchhhchh------------
Confidence 3579999999999999999998767899999999999999998532 1 1357899999887651
Q ss_pred hccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc--cchhcccCCh---------hHH-------
Q 045407 194 RNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF--NYSCCCLHKR---------ADL------- 255 (382)
Q Consensus 194 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af--n~S~~yL~~r---------~dL------- 255 (382)
. +....||+|++- |.+.+.+... +++
T Consensus 310 ----~--------------------------------~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q 353 (429)
T 1sqg_A 310 ----W--------------------------------CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ 353 (429)
T ss_dssp ----H--------------------------------HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHH
T ss_pred ----h--------------------------------cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHH
Confidence 0 113569999851 2233333322 233
Q ss_pred HHHHHHHHhhccCCCcEEEEe
Q 045407 256 VLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 256 ~~yFr~V~~~L~~pGGiFVfD 276 (382)
...++++++.|+ |||++|+-
T Consensus 354 ~~~L~~a~~~Lk-pGG~lvys 373 (429)
T 1sqg_A 354 SEILDAIWPHLK-TGGTLVYA 373 (429)
T ss_dssp HHHHHHHGGGEE-EEEEEEEE
T ss_pred HHHHHHHHHhcC-CCCEEEEE
Confidence 578999999999 99999994
No 244
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.89 E-value=5.8e-09 Score=103.44 Aligned_cols=100 Identities=18% Similarity=0.118 Sum_probs=75.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCC--------------------------------------CeEEEEeCCHHHHHHHHH
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR--------------------------------------RTAVGLDLDLEALEWCME 155 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~--------------------------------------~tVvGVDLS~emL~~A~e 155 (382)
...|||+|||||.++++.|..+.+ .+|+|+|+|+.||+.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 357999999999999999988643 469999999999999999
Q ss_pred hccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCC
Q 045407 156 NNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPA 235 (382)
Q Consensus 156 ~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (382)
|... .+- ..+|.|.++|+.++. . ..+
T Consensus 276 Na~~-~gl--~~~i~~~~~D~~~l~-----------------~----------------------------------~~~ 301 (385)
T 3ldu_A 276 NAEI-AGV--DEYIEFNVGDATQFK-----------------S----------------------------------EDE 301 (385)
T ss_dssp HHHH-HTC--GGGEEEEECCGGGCC-----------------C----------------------------------SCB
T ss_pred HHHH-cCC--CCceEEEECChhhcC-----------------c----------------------------------CCC
Confidence 8643 111 137999999987655 1 346
Q ss_pred ccEEEEccchhcccCChhHHHHHHHHHHhhcc
Q 045407 236 RDIICAFNYSCCCLHKRADLVLYFKHVLHALS 267 (382)
Q Consensus 236 fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~ 267 (382)
||+|++--=..-.+.+.+++...|+.+.+.|+
T Consensus 302 ~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 302 FGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp SCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 89998733211234456788888888888887
No 245
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.88 E-value=2.2e-09 Score=109.73 Aligned_cols=108 Identities=10% Similarity=-0.002 Sum_probs=78.6
Q ss_pred CCcccccCCCccHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS-RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~-~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||..|+.+|+.-. ..+|+|+|+|+.||+.++++... . +.. |.++++|++++.. .
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r-~---G~~-v~~~~~Da~~l~~--~-------- 166 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER-W---GAP-LAVTQAPPRALAE--A-------- 166 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-H---CCC-CEEECSCHHHHHH--H--------
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-c---CCe-EEEEECCHHHhhh--h--------
Confidence 35799999999999999998743 35899999999999999998532 2 223 8899999876541 0
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEE--ccchhcccCC---------hhHH------
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICA--FNYSCCCLHK---------RADL------ 255 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~a--fn~S~~yL~~---------r~dL------ 255 (382)
+ ...||+|++ -|.+.+.+.. .+++
T Consensus 167 -----~----------------------------------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~ 207 (464)
T 3m6w_A 167 -----F----------------------------------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEV 207 (464)
T ss_dssp -----H----------------------------------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHH
T ss_pred -----c----------------------------------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHH
Confidence 1 356899984 1222233222 2222
Q ss_pred -HHHHHHHHhhccCCCcEEEEe
Q 045407 256 -VLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 256 -~~yFr~V~~~L~~pGGiFVfD 276 (382)
...++++++.|+ |||++|+-
T Consensus 208 Q~~iL~~a~~~Lk-pGG~Lvys 228 (464)
T 3m6w_A 208 QKALLAQASRLLG-PGGVLVYS 228 (464)
T ss_dssp HHHHHHHHHTTEE-EEEEEEEE
T ss_pred HHHHHHHHHHhcC-CCcEEEEE
Confidence 778999999999 99999983
No 246
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.88 E-value=6.3e-10 Score=95.63 Aligned_cols=86 Identities=10% Similarity=-0.024 Sum_probs=65.9
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
.+||+++||+ +++|+|+.||+.|+++.. .++.++++|+.+++.
T Consensus 14 ~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~------------- 56 (176)
T 2ld4_A 14 QFVAVVWDKS----------------SPVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQ------------- 56 (176)
T ss_dssp SEEEEEECTT----------------SCHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGG-------------
T ss_pred CEEEEecCCc----------------eeeeCCHHHHHHHHHhcc--------cCcEEEEechhcCcc-------------
Confidence 4678888885 249999999999999852 148899999977651
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEE
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFV 274 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFV 274 (382)
..+....||+|+|.+ ++.|+. .++...|++++++|+ |||+|+
T Consensus 57 ----------------------------------~~~~~~~fD~V~~~~-~l~~~~--~~~~~~l~~~~r~Lk-pgG~l~ 98 (176)
T 2ld4_A 57 ----------------------------------SAHKESSFDIILSGL-VPGSTT--LHSAEILAEIARILR-PGGCLF 98 (176)
T ss_dssp ----------------------------------GCCCSSCEEEEEECC-STTCCC--CCCHHHHHHHHHHEE-EEEEEE
T ss_pred ----------------------------------ccCCCCCEeEEEECC-hhhhcc--cCHHHHHHHHHHHCC-CCEEEE
Confidence 001246799999865 677761 245789999999999 999999
Q ss_pred E
Q 045407 275 M 275 (382)
Q Consensus 275 f 275 (382)
+
T Consensus 99 ~ 99 (176)
T 2ld4_A 99 L 99 (176)
T ss_dssp E
T ss_pred E
Confidence 9
No 247
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.88 E-value=2.1e-09 Score=109.74 Aligned_cols=110 Identities=15% Similarity=0.053 Sum_probs=80.3
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||..|+.+|+.- ....|+|+|+|+.||+.++++... .+ ..+|.++++|++++..
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r-~g---~~nv~~~~~D~~~~~~----------- 182 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISR-CG---ISNVALTHFDGRVFGA----------- 182 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH-HT---CCSEEEECCCSTTHHH-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cC---CCcEEEEeCCHHHhhh-----------
Confidence 3579999999999999999873 346899999999999999998532 22 2368999999987651
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc--cchhcccCC---------hhH-------
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF--NYSCCCLHK---------RAD------- 254 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af--n~S~~yL~~---------r~d------- 254 (382)
. ....||+|++- |...+.+.. .++
T Consensus 183 -----~---------------------------------~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~ 224 (479)
T 2frx_A 183 -----A---------------------------------VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAAT 224 (479)
T ss_dssp -----H---------------------------------STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHH
T ss_pred -----h---------------------------------ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHH
Confidence 0 03569999872 222232221 111
Q ss_pred HHHHHHHHHhhccCCCcEEEEec
Q 045407 255 LVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 255 L~~yFr~V~~~L~~pGGiFVfDl 277 (382)
....++++++.|+ |||++|+..
T Consensus 225 q~~iL~~a~~~Lk-pGG~LvysT 246 (479)
T 2frx_A 225 QRELIDSAFHALR-PGGTLVYST 246 (479)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHHHHHhcC-CCCEEEEec
Confidence 2467999999999 999999953
No 248
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.88 E-value=8.3e-09 Score=102.77 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=77.0
Q ss_pred CCcccccCCCccHhHHHHHHhCCC--------------------------------------CeEEEEeCCHHHHHHHHH
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR--------------------------------------RTAVGLDLDLEALEWCME 155 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~--------------------------------------~tVvGVDLS~emL~~A~e 155 (382)
...|+|.|||||.++++.|..+.+ .+|+|+|+|+.||+.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 457999999999999999987754 469999999999999999
Q ss_pred hccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCC
Q 045407 156 NNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPA 235 (382)
Q Consensus 156 ~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (382)
|... .+- ..+|.++++|+.++. . ...
T Consensus 282 Na~~-~gl--~~~I~~~~~D~~~~~-----------------~----------------------------------~~~ 307 (393)
T 3k0b_A 282 NAVE-AGL--GDLITFRQLQVADFQ-----------------T----------------------------------EDE 307 (393)
T ss_dssp HHHH-TTC--TTCSEEEECCGGGCC-----------------C----------------------------------CCC
T ss_pred HHHH-cCC--CCceEEEECChHhCC-----------------C----------------------------------CCC
Confidence 8643 111 136999999997665 1 346
Q ss_pred ccEEEEcc-chhcccCChhHHHHHHHHHHhhccCC--CcEEEE
Q 045407 236 RDIICAFN-YSCCCLHKRADLVLYFKHVLHALSKK--GGIFVM 275 (382)
Q Consensus 236 fDiV~afn-~S~~yL~~r~dL~~yFr~V~~~L~~p--GGiFVf 275 (382)
||+|++-= |.. -+.+.+++...++.+.+.|+ + ||.+.+
T Consensus 308 fD~Iv~NPPYg~-rl~~~~~l~~ly~~lg~~lk-~~~g~~~~i 348 (393)
T 3k0b_A 308 YGVVVANPPYGE-RLEDEEAVRQLYREMGIVYK-RMPTWSVYV 348 (393)
T ss_dssp SCEEEECCCCCC-SHHHHHHHHHHHHHHHHHHH-TCTTCEEEE
T ss_pred CCEEEECCCCcc-ccCCchhHHHHHHHHHHHHh-cCCCCEEEE
Confidence 89888631 111 23455678888888888877 4 554444
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.86 E-value=2.7e-09 Score=103.69 Aligned_cols=70 Identities=13% Similarity=0.168 Sum_probs=50.8
Q ss_pred ChhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEE
Q 045407 94 PKGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLF 172 (382)
Q Consensus 94 p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~ 172 (382)
|..-+.++.+.+ ....+.+|||+|||||.++..++++- ...+++|+|+|+.|++.| .++.++
T Consensus 24 P~~l~~~~~~~~----~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~ 86 (421)
T 2ih2_A 24 PPEVVDFMVSLA----EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGI 86 (421)
T ss_dssp CHHHHHHHHHHC----CCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEE
T ss_pred CHHHHHHHHHhh----ccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEE
Confidence 444445544433 22234589999999999999999863 346899999999999655 268899
Q ss_pred eccCCCch
Q 045407 173 HGNVLQPL 180 (382)
Q Consensus 173 ~gDV~~~~ 180 (382)
++|++++.
T Consensus 87 ~~D~~~~~ 94 (421)
T 2ih2_A 87 LADFLLWE 94 (421)
T ss_dssp ESCGGGCC
T ss_pred eCChhhcC
Confidence 99986543
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.86 E-value=8.1e-09 Score=103.85 Aligned_cols=59 Identities=10% Similarity=0.041 Sum_probs=49.2
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|||+|||||.++..+++.+. +|+|||+|++|++.|+++... .+.. +.++++|+.++.
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~----ngl~-v~~~~~d~~~~~ 350 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEI----NNVD-AEFEVASDREVS 350 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----HTCC-EEEEECCTTTCC
T ss_pred CEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHH----cCCc-EEEEECChHHcC
Confidence 4799999999999999999874 799999999999999998532 1223 899999987654
No 251
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.86 E-value=3.5e-09 Score=101.51 Aligned_cols=62 Identities=15% Similarity=0.074 Sum_probs=51.9
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..|||+|||+|.+|+..|++|. .+|+++|+|+.+++++++|... .+ -..+|.++++|.+++.
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~-N~--v~~~v~~~~~D~~~~~ 188 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHL-NK--VEDRMSAYNMDNRDFP 188 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHH-TT--CTTTEEEECSCTTTCC
T ss_pred CEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHH-cC--CCCcEEEEeCcHHHhc
Confidence 4699999999999999999986 4899999999999999998533 11 1247999999998765
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.85 E-value=2.2e-08 Score=99.62 Aligned_cols=106 Identities=12% Similarity=0.105 Sum_probs=78.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCC--------------------------------------CeEEEEeCCHHHHHHHHH
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR--------------------------------------RTAVGLDLDLEALEWCME 155 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~--------------------------------------~tVvGVDLS~emL~~A~e 155 (382)
...|+|.|||||.++++.|..+.+ .+|+|+|+|+.||+.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 357999999999999999987754 469999999999999999
Q ss_pred hccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCC
Q 045407 156 NNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPA 235 (382)
Q Consensus 156 ~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (382)
|... .+- ..+|.++++|+.++. . ...
T Consensus 275 Na~~-~gl--~~~I~~~~~D~~~l~-----------------~----------------------------------~~~ 300 (384)
T 3ldg_A 275 NARE-VGL--EDVVKLKQMRLQDFK-----------------T----------------------------------NKI 300 (384)
T ss_dssp HHHH-TTC--TTTEEEEECCGGGCC-----------------C----------------------------------CCC
T ss_pred HHHH-cCC--CCceEEEECChHHCC-----------------c----------------------------------cCC
Confidence 8643 111 236999999997765 1 246
Q ss_pred ccEEEEcc-chhcccCChhHHHHHHHHHHhhccCC--CcEEEE
Q 045407 236 RDIICAFN-YSCCCLHKRADLVLYFKHVLHALSKK--GGIFVM 275 (382)
Q Consensus 236 fDiV~afn-~S~~yL~~r~dL~~yFr~V~~~L~~p--GGiFVf 275 (382)
||+|++-= |... +.+.+++...++.+.+.|+ + ||...+
T Consensus 301 fD~Iv~NPPYG~r-l~~~~~l~~ly~~lg~~lk-~~~g~~~~i 341 (384)
T 3ldg_A 301 NGVLISNPPYGER-LLDDKAVDILYNEMGETFA-PLKTWSQFI 341 (384)
T ss_dssp SCEEEECCCCTTT-TSCHHHHHHHHHHHHHHHT-TCTTSEEEE
T ss_pred cCEEEECCchhhc-cCCHHHHHHHHHHHHHHHh-hCCCcEEEE
Confidence 89888621 2222 4566889999999888887 4 554443
No 253
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.81 E-value=3.9e-10 Score=103.54 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=50.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..+|||+|||||.++..|++++ .+|+|||+|++|++.|+++.. ...++.++++|+++++
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~------~~~~v~~~~~D~~~~~ 88 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK------LNTRVTLIHQDILQFQ 88 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT------TCSEEEECCSCCTTTT
T ss_pred CCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc------cCCceEEEECChhhcC
Confidence 4579999999999999999998 479999999999998887642 2358999999998766
No 254
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.80 E-value=2e-08 Score=95.71 Aligned_cols=73 Identities=14% Similarity=0.010 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
|-..+.++... .+-... +|||+|||||.++..+++++. +|+|||+|++|++.++++.. ..++.++++|+
T Consensus 32 d~~i~~~Iv~~-~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~ 100 (271)
T 3fut_A 32 SEAHLRRIVEA-ARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDA 100 (271)
T ss_dssp CHHHHHHHHHH-HCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTT-------TSSEEEEESCG
T ss_pred CHHHHHHHHHh-cCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcC-------CCCEEEEECCh
Confidence 34455555554 333334 899999999999999999984 69999999999999999852 14799999999
Q ss_pred CCch
Q 045407 177 LQPL 180 (382)
Q Consensus 177 ~~~~ 180 (382)
++++
T Consensus 101 l~~~ 104 (271)
T 3fut_A 101 LLYP 104 (271)
T ss_dssp GGSC
T ss_pred hhCC
Confidence 8776
No 255
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.80 E-value=5.7e-09 Score=106.42 Aligned_cols=108 Identities=11% Similarity=-0.031 Sum_probs=79.8
Q ss_pred CCcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
..+|||+|||||..|+.+|+.- ...+|+|+|+|+.+|+.++++... ++ ..+|.++++|.+++.. .
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r-~g---~~nv~v~~~Da~~l~~--~-------- 171 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER-WG---VSNAIVTNHAPAELVP--H-------- 171 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH-HT---CSSEEEECCCHHHHHH--H--------
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH-cC---CCceEEEeCCHHHhhh--h--------
Confidence 3579999999999999999863 335899999999999999998532 22 2468999999866541 0
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEc--cchhcccCChhHH---------------
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAF--NYSCCCLHKRADL--------------- 255 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~af--n~S~~yL~~r~dL--------------- 255 (382)
+ ...||+|++- |...+.+....++
T Consensus 172 -----~----------------------------------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~ 212 (456)
T 3m4x_A 172 -----F----------------------------------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKR 212 (456)
T ss_dssp -----H----------------------------------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHH
T ss_pred -----c----------------------------------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHH
Confidence 1 3569999862 3344444433332
Q ss_pred -HHHHHHHHhhccCCCcEEEE
Q 045407 256 -VLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 256 -~~yFr~V~~~L~~pGGiFVf 275 (382)
...++++++.|+ |||++|+
T Consensus 213 Q~~iL~~a~~~Lk-pGG~LvY 232 (456)
T 3m4x_A 213 QQEILSSAIKMLK-NKGQLIY 232 (456)
T ss_dssp HHHHHHHHHHTEE-EEEEEEE
T ss_pred HHHHHHHHHHhcC-CCcEEEE
Confidence 277999999999 9999998
No 256
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.79 E-value=7.4e-08 Score=96.28 Aligned_cols=60 Identities=17% Similarity=0.280 Sum_probs=50.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
..+|||+|||+|.++..|++.+ .+|+|+|+|++||+.|+++... .+..++.|+++|+.++
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~----~~~~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARL----NGLQNVTFYHENLEED 346 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHH----TTCCSEEEEECCTTSC
T ss_pred CCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHH----cCCCceEEEECCHHHH
Confidence 4579999999999999999986 4799999999999999998532 1223799999999774
No 257
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.76 E-value=7.9e-09 Score=99.65 Aligned_cols=95 Identities=13% Similarity=0.032 Sum_probs=67.1
Q ss_pred CcccccCC------CccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEE-EeccCCCchhhhhcc
Q 045407 115 LHLQEDFC------GTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISL-FHGNVLQPLEAKLVR 186 (382)
Q Consensus 115 ~~LLEl~C------GTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l-~~gDV~~~~~~~~~~ 186 (382)
.+|||+|| |||. ..+++. +...+|+|||+|+. + .++.+ +++|++++.
T Consensus 65 ~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v----------------~~v~~~i~gD~~~~~------ 119 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V----------------SDADSTLIGDCATVH------ 119 (290)
T ss_dssp CEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B----------------CSSSEEEESCGGGCC------
T ss_pred CEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C----------------CCCEEEEECccccCC------
Confidence 47999999 5576 333443 33468999999997 1 14678 999997665
Q ss_pred cchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccch-------hcccCChhHHHHHH
Q 045407 187 YEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYS-------CCCLHKRADLVLYF 259 (382)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S-------~~yL~~r~dL~~yF 259 (382)
+ ..+||+|+|-... ..+......+...|
T Consensus 120 -----------~----------------------------------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l 154 (290)
T 2xyq_A 120 -----------T----------------------------------ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLC 154 (290)
T ss_dssp -----------C----------------------------------SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHH
T ss_pred -----------c----------------------------------cCcccEEEEcCCccccccccccccchHHHHHHHH
Confidence 1 2569999984321 12222334566899
Q ss_pred HHHHhhccCCCcEEEEeccCC
Q 045407 260 KHVLHALSKKGGIFVMDLYGG 280 (382)
Q Consensus 260 r~V~~~L~~pGGiFVfDl~gg 280 (382)
+.++++|+ |||.|++.++.+
T Consensus 155 ~~a~r~Lk-pGG~~v~~~~~~ 174 (290)
T 2xyq_A 155 GFIKQKLA-LGGSIAVKITEH 174 (290)
T ss_dssp HHHHHHEE-EEEEEEEEECSS
T ss_pred HHHHHhcC-CCcEEEEEEecc
Confidence 99999999 999999977644
No 258
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.73 E-value=1.5e-08 Score=97.64 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
+-..+.++... ++-....+|||+|||||.++..|++++ .+|+|||+|++|++.|+++.. +..++.++++|+
T Consensus 35 d~~i~~~Iv~~-l~~~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~------~~~~v~vi~gD~ 105 (295)
T 3gru_A 35 DKNFVNKAVES-ANLTKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKE------LYNNIEIIWGDA 105 (295)
T ss_dssp CHHHHHHHHHH-TTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHH------HCSSEEEEESCT
T ss_pred CHHHHHHHHHh-cCCCCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhc------cCCCeEEEECch
Confidence 33455555543 333334579999999999999999997 479999999999999999852 124799999999
Q ss_pred CCch
Q 045407 177 LQPL 180 (382)
Q Consensus 177 ~~~~ 180 (382)
++++
T Consensus 106 l~~~ 109 (295)
T 3gru_A 106 LKVD 109 (295)
T ss_dssp TTSC
T ss_pred hhCC
Confidence 8876
No 259
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.72 E-value=1e-08 Score=101.72 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=76.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCC------------CCcceEEEeccCCCchh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGAD------------GYSRISLFHGNVLQPLE 181 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d------------~~~RI~l~~gDV~~~~~ 181 (382)
+.+|||+|||||.+++++|++.....|+++|+|++++++|++|... .... +-..+.++++|+.++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~-n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVML-NFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHH-HCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH-hcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3469999999999999999984445799999999999999998532 1000 11238999999865541
Q ss_pred hhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHH
Q 045407 182 AKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKH 261 (382)
Q Consensus 182 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~ 261 (382)
. . ...||+|+ ++-++- ...++..
T Consensus 127 ----------------~--------------------------------~-~~~fD~I~--lDP~~~------~~~~l~~ 149 (378)
T 2dul_A 127 ----------------E--------------------------------R-HRYFHFID--LDPFGS------PMEFLDT 149 (378)
T ss_dssp ----------------H--------------------------------S-TTCEEEEE--ECCSSC------CHHHHHH
T ss_pred ----------------h--------------------------------c-cCCCCEEE--eCCCCC------HHHHHHH
Confidence 0 0 24699999 345432 2467888
Q ss_pred HHhhccCCCcEEEEe
Q 045407 262 VLHALSKKGGIFVMD 276 (382)
Q Consensus 262 V~~~L~~pGGiFVfD 276 (382)
+.+.|+ +||++++-
T Consensus 150 a~~~lk-~gG~l~vt 163 (378)
T 2dul_A 150 ALRSAK-RRGILGVT 163 (378)
T ss_dssp HHHHEE-EEEEEEEE
T ss_pred HHHhcC-CCCEEEEE
Confidence 899998 99999884
No 260
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.68 E-value=7.2e-08 Score=90.14 Aligned_cols=74 Identities=16% Similarity=0.059 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
+-..+.++... .+-....+|||+|||||.++..|++++. .+|+|||+|+.|++.++++ . ..++.++++|+
T Consensus 16 d~~i~~~iv~~-~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~~v~avEid~~~~~~~~~~--~------~~~v~~i~~D~ 85 (249)
T 3ftd_A 16 SEGVLKKIAEE-LNIEEGNTVVEVGGGTGNLTKVLLQHPL-KKLYVIELDREMVENLKSI--G------DERLEVINEDA 85 (249)
T ss_dssp CHHHHHHHHHH-TTCCTTCEEEEEESCHHHHHHHHTTSCC-SEEEEECCCHHHHHHHTTS--C------CTTEEEECSCT
T ss_pred CHHHHHHHHHh-cCCCCcCEEEEEcCchHHHHHHHHHcCC-CeEEEEECCHHHHHHHHhc--c------CCCeEEEEcch
Confidence 34455555554 3333346899999999999999999953 4899999999999999876 1 14799999999
Q ss_pred CCch
Q 045407 177 LQPL 180 (382)
Q Consensus 177 ~~~~ 180 (382)
++++
T Consensus 86 ~~~~ 89 (249)
T 3ftd_A 86 SKFP 89 (249)
T ss_dssp TTCC
T ss_pred hhCC
Confidence 8877
No 261
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.67 E-value=3.4e-08 Score=95.43 Aligned_cols=62 Identities=21% Similarity=0.156 Sum_probs=52.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..+|||+|||||.++..++++.+..+|+|||+|++||+.|+++... .+ .++.++++|+.+++
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~----~g-~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKE----FS-DRVSLFKVSYREAD 88 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGG----GT-TTEEEEECCGGGHH
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh----cC-CcEEEEECCHHHHH
Confidence 3579999999999999999996556899999999999999998532 12 58999999987765
No 262
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.67 E-value=2.5e-08 Score=95.14 Aligned_cols=78 Identities=12% Similarity=0.036 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCC--CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEec
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSR--RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~--~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~g 174 (382)
|-..+.++... ++-....+|||+|||||.++..|++++.. .+|+|||+|++|++.|+++. ..++.++++
T Consensus 27 d~~i~~~iv~~-~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--------~~~v~~i~~ 97 (279)
T 3uzu_A 27 DHGVIDAIVAA-IRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--------GELLELHAG 97 (279)
T ss_dssp CHHHHHHHHHH-HCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--------GGGEEEEES
T ss_pred CHHHHHHHHHh-cCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--------CCCcEEEEC
Confidence 33445555543 33333467999999999999999999853 33999999999999999982 147999999
Q ss_pred cCCCchhhh
Q 045407 175 NVLQPLEAK 183 (382)
Q Consensus 175 DV~~~~~~~ 183 (382)
|++++++..
T Consensus 98 D~~~~~~~~ 106 (279)
T 3uzu_A 98 DALTFDFGS 106 (279)
T ss_dssp CGGGCCGGG
T ss_pred ChhcCChhH
Confidence 999887543
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.64 E-value=4.5e-08 Score=95.67 Aligned_cols=61 Identities=11% Similarity=0.102 Sum_probs=49.9
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+..|||+|||||.++..+|+.+ .+|+|||+|++|++.|++|... .+..++.++++|+.+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~----ng~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAA----NHIDNVQIIRMAAEEFT 274 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHH----TTCCSEEEECCCSHHHH
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHH----cCCCceEEEECCHHHHH
Confidence 3569999999999999999865 4799999999999999998532 12247999999986543
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.63 E-value=4.8e-08 Score=97.74 Aligned_cols=64 Identities=14% Similarity=0.060 Sum_probs=47.6
Q ss_pred CcccccCCCccHhHHHHHHhC-------------CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSD-------------SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g-------------~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|+|.|||||.+++.+++.- ....++|+|+++.|++.|+.+... ......++.+.++|.+..+
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l--~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL--HGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH--TTCCSSCCSEEECCTTTSC
T ss_pred CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH--hCCCcCCCCEeeCCCCCCc
Confidence 479999999999999988752 124699999999999999987532 1111115778999987654
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.46 E-value=8.2e-07 Score=94.59 Aligned_cols=64 Identities=20% Similarity=0.117 Sum_probs=50.4
Q ss_pred CCcccccCCCccHhHHHHHHhC------------------------------------------CCCeEEEEeCCHHHHH
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD------------------------------------------SRRTAVGLDLDLEALE 151 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g------------------------------------------~~~tVvGVDLS~emL~ 151 (382)
...|+|.+||||.++++.|..+ +..+++|+|+|+.|++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 3579999999999999988764 1247999999999999
Q ss_pred HHHHhccccccCCCCcceEEEeccCCCch
Q 045407 152 WCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 152 ~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.|++|... .+ -..+|.|.++|+.++.
T Consensus 271 ~A~~N~~~-ag--v~~~i~~~~~D~~~~~ 296 (703)
T 3v97_A 271 RARTNARL-AG--IGELITFEVKDVAQLT 296 (703)
T ss_dssp HHHHHHHH-TT--CGGGEEEEECCGGGCC
T ss_pred HHHHHHHH-cC--CCCceEEEECChhhCc
Confidence 99998643 11 1235999999997654
No 266
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.44 E-value=2.5e-07 Score=86.84 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=47.8
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLE 181 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~ 181 (382)
.+|||+|||||.++. ++ ++...+|+|||+|+.|++.++++... ..++.++++|+.++++
T Consensus 23 ~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 23 QAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNF 81 (252)
T ss_dssp CCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCH
T ss_pred CEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCH
Confidence 579999999999999 65 45322399999999999999987521 2479999999988763
No 267
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.44 E-value=5.3e-07 Score=87.11 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=50.6
Q ss_pred CcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|||+|||+|..|+.+|+. +...+|+|+|+|+.+|+.++++... + +..+|.++++|+.++.
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r-~---g~~~v~~~~~D~~~~~ 166 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR-A---GVSCCELAEEDFLAVS 166 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-T---TCCSEEEEECCGGGSC
T ss_pred CEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-c---CCCeEEEEeCChHhcC
Confidence 47999999999999999986 3446899999999999999998532 2 2246999999987654
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.44 E-value=1.2e-07 Score=89.14 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=48.3
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDL-------EALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~-------emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
.+|||+|||||.++..+++.|. +|+|+|+|+ +||+.|+++... .+. ..||.++++|+.++
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~-~~~--~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPET-QDT--AARINLHFGNAAEQ 151 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHH-HHH--HTTEEEEESCHHHH
T ss_pred CeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHh-hCC--ccCeEEEECCHHHH
Confidence 4699999999999999999874 699999999 999999876421 110 13699999998664
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.44 E-value=3.8e-07 Score=96.73 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=72.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCC----eEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRR----TAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEP 189 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~----tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~ 189 (382)
..+|+++|||||.|+..-++.+.+. +|++|+-++ |-..|++..... .-..+|.+++|||++..
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N---~~~dkVtVI~gd~eev~--------- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE---EWGSQVTVVSSDMREWV--------- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH---TTGGGEEEEESCTTTCC---------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc---cCCCeEEEEeCcceecc---------
Confidence 4579999999999955555544322 689999998 444565543221 11358999999999877
Q ss_pred hhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCC
Q 045407 190 QKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKK 269 (382)
Q Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~p 269 (382)
+ .+++||||+=--. |+...+-...++-..-+.|+ |
T Consensus 425 --------L----------------------------------PEKVDIIVSEwMG--~fLl~E~mlevL~Ardr~LK-P 459 (637)
T 4gqb_A 425 --------A----------------------------------PEKADIIVSELLG--SFADNELSPECLDGAQHFLK-D 459 (637)
T ss_dssp --------C----------------------------------SSCEEEEECCCCB--TTBGGGCHHHHHHHHGGGEE-E
T ss_pred --------C----------------------------------CcccCEEEEEcCc--ccccccCCHHHHHHHHHhcC-C
Confidence 3 4679999996533 33433445577777778888 9
Q ss_pred CcEEEE
Q 045407 270 GGIFVM 275 (382)
Q Consensus 270 GGiFVf 275 (382)
||+.|=
T Consensus 460 gGimiP 465 (637)
T 4gqb_A 460 DGVSIP 465 (637)
T ss_dssp EEEEES
T ss_pred CcEEcc
Confidence 999753
No 270
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.43 E-value=1.5e-07 Score=95.04 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=50.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
.+|||+|||+|..+..+++.+. +|+|||+|+.|+++|++|... +. .+..+|.++++|+.++
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~-~~-~gl~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPL-LL-NEGKDVNILTGDFKEY 155 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHH-HS-CTTCEEEEEESCGGGS
T ss_pred CEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHH-hc-cCCCcEEEEECcHHHh
Confidence 4699999999999999999884 799999999999999998532 10 0124799999999875
No 271
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.42 E-value=5.5e-07 Score=96.73 Aligned_cols=111 Identities=12% Similarity=-0.001 Sum_probs=75.6
Q ss_pred CCcccccCCCccHhHHHHHHh----C---------CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRS----D---------SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~----g---------~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..+|||+|||||.|+..-++. + ...+|++|+-++.+....+..+.+.. ..+|.++++||++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~----~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTW----KRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTT----TTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCC----CCeEEEEeCchhhcc
Confidence 568999999999997543222 2 22389999999977655555443322 247999999999876
Q ss_pred hhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHH
Q 045407 181 EAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFK 260 (382)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr 260 (382)
+. .+ +-..+++||||+=. ++||...+-....+.
T Consensus 486 -----------------lp----------------~~------------~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld 518 (745)
T 3ua3_A 486 -----------------GI----------------AK------------DRGFEQPDIIVSEL--LGSFGDNELSPECLD 518 (745)
T ss_dssp -----------------HH----------------HH------------HTTCCCCSEEEECC--CBTTBGGGSHHHHHH
T ss_pred -----------------cc----------------cc------------cCCCCcccEEEEec--cccccchhccHHHHH
Confidence 20 00 00146799999975 456555555566777
Q ss_pred HHHhhccCCCcEEEEe
Q 045407 261 HVLHALSKKGGIFVMD 276 (382)
Q Consensus 261 ~V~~~L~~pGGiFVfD 276 (382)
.|.+.|+ |||++|=+
T Consensus 519 ~v~r~Lk-p~Gi~iP~ 533 (745)
T 3ua3_A 519 GVTGFLK-PTTISIPQ 533 (745)
T ss_dssp TTGGGSC-TTCEEESC
T ss_pred HHHHhCC-CCcEEECC
Confidence 7788898 99997643
No 272
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.38 E-value=2.1e-07 Score=93.29 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=73.3
Q ss_pred CcccccCCCccHhHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCCcc-eEEEeccCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGYSR-ISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~~R-I~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
.+|||+|||||.+++++|++... ..|++||+|+.+++.+++|... .+- ..+ +.++++|+.++...
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~-Ngl--~~~~v~v~~~Da~~~l~~---------- 120 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL-NNI--PEDRYEIHGMEANFFLRK---------- 120 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH-TTC--CGGGEEEECSCHHHHHHS----------
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-hCC--CCceEEEEeCCHHHHHHH----------
Confidence 46999999999999999996321 3799999999999999998532 111 124 99999998654300
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcE
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGI 272 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGi 272 (382)
.+ ...||+|++=- ++. ...++..+.+.|+ +||+
T Consensus 121 -------------------------------------~~-~~~fD~V~lDP--~g~------~~~~l~~a~~~Lk-~gGl 153 (392)
T 3axs_A 121 -------------------------------------EW-GFGFDYVDLDP--FGT------PVPFIESVALSMK-RGGI 153 (392)
T ss_dssp -------------------------------------CC-SSCEEEEEECC--SSC------CHHHHHHHHHHEE-EEEE
T ss_pred -------------------------------------hh-CCCCcEEEECC--CcC------HHHHHHHHHHHhC-CCCE
Confidence 00 24699998543 321 1347778888999 9999
Q ss_pred EEE
Q 045407 273 FVM 275 (382)
Q Consensus 273 FVf 275 (382)
+++
T Consensus 154 l~~ 156 (392)
T 3axs_A 154 LSL 156 (392)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 273
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.30 E-value=7.6e-06 Score=75.36 Aligned_cols=135 Identities=7% Similarity=-0.089 Sum_probs=79.7
Q ss_pred hhhHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEec
Q 045407 95 KGDISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG 174 (382)
Q Consensus 95 ~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~g 174 (382)
...+.||+..+.. +.+|||+||| .|+.|+.+....+|+.||.|+++.+.|+++.. +.+-....+|.+++|
T Consensus 18 ~~~~~~L~~~l~~------a~~VLEiGtG---ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~g 87 (202)
T 3cvo_A 18 PAEAEALRMAYEE------AEVILEYGSG---GSTVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWT 87 (202)
T ss_dssp HHHHHHHHHHHHH------CSEEEEESCS---HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEEC
T ss_pred HHHHHHHHHHhhC------CCEEEEECch---HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEe
Confidence 4456777773322 5579999986 36666554434689999999999999998743 222101358999999
Q ss_pred cCCCch-hhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCC-CCCCccEEEEccchhcccCCh
Q 045407 175 NVLQPL-EAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKS-SLPARDIICAFNYSCCCLHKR 252 (382)
Q Consensus 175 DV~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fDiV~afn~S~~yL~~r 252 (382)
|..+.. |- -+ .+.+.-+.+..-.... -.. ...+||+|+.=-. ++
T Consensus 88 da~~~~~wg-~p----------------~~~~~~~~l~~~~~~i-----------~~~~~~~~fDlIfIDg~------k~ 133 (202)
T 3cvo_A 88 DIGPTGDWG-HP----------------VSDAKWRSYPDYPLAV-----------WRTEGFRHPDVVLVDGR------FR 133 (202)
T ss_dssp CCSSBCGGG-CB----------------SSSTTGGGTTHHHHGG-----------GGCTTCCCCSEEEECSS------SH
T ss_pred Cchhhhccc-cc----------------ccchhhhhHHHHhhhh-----------hccccCCCCCEEEEeCC------Cc
Confidence 976531 10 00 0000000000000000 000 1357999987652 22
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEec
Q 045407 253 ADLVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 253 ~dL~~yFr~V~~~L~~pGGiFVfDl 277 (382)
..+|..+...|+ |||++|+|-
T Consensus 134 ---~~~~~~~l~~l~-~GG~Iv~DN 154 (202)
T 3cvo_A 134 ---VGCALATAFSIT-RPVTLLFDD 154 (202)
T ss_dssp ---HHHHHHHHHHCS-SCEEEEETT
T ss_pred ---hhHHHHHHHhcC-CCeEEEEeC
Confidence 377777889998 999999984
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.28 E-value=1.3e-06 Score=90.31 Aligned_cols=64 Identities=23% Similarity=0.082 Sum_probs=46.3
Q ss_pred CcccccCCCccHhHHHHHHhCC------------------CCeEEEEeCCHHHHHHHHHhccccccCCCC---cceEEEe
Q 045407 115 LHLQEDFCGTALLSTEWLRSDS------------------RRTAVGLDLDLEALEWCMENNLNKVGADGY---SRISLFH 173 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~------------------~~tVvGVDLS~emL~~A~e~~~~kl~~d~~---~RI~l~~ 173 (382)
.+|+|.|||||.+.+..++.-. ...++|+|+++.|++.|+.+..- ..... .++.+++
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l--~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL--HDIEGNLDHGGAIRL 248 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT--TTCCCBGGGTBSEEE
T ss_pred CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH--hCCCccccccCCeEe
Confidence 4799999999999988876421 13699999999999999987532 11111 1277889
Q ss_pred ccCCCch
Q 045407 174 GNVLQPL 180 (382)
Q Consensus 174 gDV~~~~ 180 (382)
+|.+..+
T Consensus 249 gDtL~~~ 255 (541)
T 2ar0_A 249 GNTLGSD 255 (541)
T ss_dssp SCTTSHH
T ss_pred CCCcccc
Confidence 9976654
No 275
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.26 E-value=2.3e-06 Score=85.40 Aligned_cols=206 Identities=14% Similarity=0.159 Sum_probs=110.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLV 193 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~ 193 (382)
+.+|+|+|||||.+|..++.. +++..+++... .+.. ...++++.-|.-.-++..+++.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~--------------ii~~i~~~~~~-~~~~-~pe~~v~~nDLp~NDFn~lF~~------ 110 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF--------------IVKHISKRFDA-AGID-PPEFTAFFSDLPSNDFNTLFQL------ 110 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH--------------HHHHHHHHHHH-TTCC-CCCEEEEEEECTTSCHHHHHHH------
T ss_pred ceEEEecCCCCChhHHHHHHH--------------HHHHHHHHHhh-cCCC-CCceeEEecCCCccchHHHHhh------
Confidence 578999999999999988754 45544443311 1111 2368888888654443333222
Q ss_pred hccccccccCccc--cchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh------------------
Q 045407 194 RNISLEECDNTLE--TSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA------------------ 253 (382)
Q Consensus 194 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~------------------ 253 (382)
|.... .... ........+.+.++..++..-.+-|+...+|+|++.. ++-||.+..
T Consensus 111 --L~~~~--~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~ 185 (374)
T 3b5i_A 111 --LPPLV--SNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFI 185 (374)
T ss_dssp --SCCBC--CCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSS
T ss_pred --hhhhh--hhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEe
Confidence 11100 0000 0000011122344444555556778788999999986 666666333
Q ss_pred -----------------HHHHHHHHHHhhccCCCcEEEEeccCCCchh-hhhHhhh-cc-CCeEEEEeecccccccceEE
Q 045407 254 -----------------DLVLYFKHVLHALSKKGGIFVMDLYGGTSSE-QKLRLQR-RF-ANFTYVWEQAEFDIIERKTR 313 (382)
Q Consensus 254 -----------------dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e-~kl~~~R-~~-~~~tyvWeq~~fD~~~~~~r 313 (382)
|+...|+..++.|+ |||.||+=+.|..... ..-.... .+ +-+.-.|..- .. ...+
T Consensus 186 ~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~-pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l-~~--eG~i- 260 (374)
T 3b5i_A 186 HGAGEKTTTAYKRQFQADLAEFLRARAAEVK-RGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDL-VR--EGLV- 260 (374)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHT-TS--SSSS-
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHH-HH--hCCc-
Confidence 66778999999999 9999999877532110 0000000 00 0000012210 00 0000
Q ss_pred EEEEEEeecccceeeeeeeeeEEecCHHHHHHHHH-HcCCcEEEEEecc
Q 045407 314 ISLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLE-EAGFRSVHFWLRE 361 (382)
Q Consensus 314 i~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~Le-eAGF~~V~v~~r~ 361 (382)
... ++ ..|..-|...|+.|++.+|+ ++||+..++-..+
T Consensus 261 --------~~e-~~-d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~ 299 (374)
T 3b5i_A 261 --------AAE-KR-DGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYK 299 (374)
T ss_dssp --------CHH-HH-SSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEE
T ss_pred --------chh-hc-ccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEe
Confidence 000 11 11334466779999999998 5999988875433
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.21 E-value=8.4e-06 Score=84.66 Aligned_cols=65 Identities=14% Similarity=0.062 Sum_probs=49.9
Q ss_pred CCcccccCCCccHhHHHHHHh---CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRS---DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~---g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..+|+|.+||||.+.+..++. .....++|+|+++.++++|+.+..- ..-...++.+.++|.+..+
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l--~gi~~~~~~I~~gDtL~~d 289 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL--HGVPIENQFLHNADTLDED 289 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH--TTCCGGGEEEEESCTTTSC
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH--cCCCcCccceEecceeccc
Confidence 357999999999999888876 2245899999999999999987432 1111246889999987664
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.19 E-value=3.1e-06 Score=82.15 Aligned_cols=113 Identities=17% Similarity=0.213 Sum_probs=82.3
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc-ccCCCCcceEEEeccCCCchhhhhcccchh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK-VGADGYSRISLFHGNVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k-l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~ 190 (382)
..|.+||=+|-|.|.++.++++.-+-.+|+.||||++++++|++....- .++-...|+.++.+|.+.+..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~--------- 152 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVN--------- 152 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTS---------
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHh---------
Confidence 4588999999999999999999866568999999999999999874210 011123589999999877651
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHH--HHHHHHHHhhccC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSK 268 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~ 268 (382)
-...+||+|+.=.+ .-......| ..+|+.++++|+
T Consensus 153 ----------------------------------------~~~~~yDvIi~D~~--dp~~~~~~L~t~eFy~~~~~~L~- 189 (294)
T 3o4f_A 153 ----------------------------------------QTSQTFDVIISDCT--DPIGPGESLFTSAFYEGCKRCLN- 189 (294)
T ss_dssp ----------------------------------------CSSCCEEEEEESCC--CCCCTTCCSSCCHHHHHHHHTEE-
T ss_pred ----------------------------------------hccccCCEEEEeCC--CcCCCchhhcCHHHHHHHHHHhC-
Confidence 01456999986432 111111111 468999999999
Q ss_pred CCcEEEEe
Q 045407 269 KGGIFVMD 276 (382)
Q Consensus 269 pGGiFVfD 276 (382)
|||+|+.=
T Consensus 190 p~Gv~v~q 197 (294)
T 3o4f_A 190 PGGIFVAQ 197 (294)
T ss_dssp EEEEEEEE
T ss_pred CCCEEEEe
Confidence 99999983
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.09 E-value=3.8e-06 Score=87.16 Aligned_cols=63 Identities=6% Similarity=-0.036 Sum_probs=43.3
Q ss_pred CCcccccCCCccHhHHHHHHhCC---------------CCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS---------------RRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~---------------~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
+.+|+|.+||||.+.+..++.-. ...++|+|+++.++++|+.+..-. +- ..+|.+.++|.+.
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~-gi--~~~i~i~~gDtL~ 321 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR-GI--DFNFGKKNADSFL 321 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT-TC--CCBCCSSSCCTTT
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh-CC--Ccccceeccchhc
Confidence 34799999999999887654210 247999999999999999875321 11 1234447777654
Q ss_pred c
Q 045407 179 P 179 (382)
Q Consensus 179 ~ 179 (382)
.
T Consensus 322 ~ 322 (544)
T 3khk_A 322 D 322 (544)
T ss_dssp S
T ss_pred C
Confidence 3
No 279
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.07 E-value=3.7e-06 Score=79.42 Aligned_cols=116 Identities=14% Similarity=0.190 Sum_probs=72.6
Q ss_pred CCCCCcccccCCCccHhHHHHHHh-------CCC-----CeEEEEeCCH---HHHH-----------HHHHhccc-----
Q 045407 111 GRQPLHLQEDFCGTALLSTEWLRS-------DSR-----RTAVGLDLDL---EALE-----------WCMENNLN----- 159 (382)
Q Consensus 111 gr~p~~LLEl~CGTG~LS~elar~-------g~~-----~tVvGVDLS~---emL~-----------~A~e~~~~----- 159 (382)
++.+.+|||+|||||..+..+++. ++. .++++++..| ++|. +|++....
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 444678999999999988876553 552 4899999877 6666 44443211
Q ss_pred ----cc-cCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCC
Q 045407 160 ----KV-GADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLP 234 (382)
Q Consensus 160 ----kl-~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (382)
.+ -.++..+|.++.||+++... . +. +....
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~-------------~--~~------------------------------~~~~~ 172 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELIS-------------Q--LD------------------------------DSLNQ 172 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGG-------------G--SC------------------------------GGGTT
T ss_pred cchhheeccCCceEEEEEECcHHHHHh-------------h--cc------------------------------cccCC
Confidence 00 12244678899999876330 0 00 00024
Q ss_pred CccEEEEccchhcccCChhH--HHHHHHHHHhhccCCCcEEEE
Q 045407 235 ARDIICAFNYSCCCLHKRAD--LVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 235 ~fDiV~afn~S~~yL~~r~d--L~~yFr~V~~~L~~pGGiFVf 275 (382)
.||+|+.=-++-. .. .+ -..+|+.+++.|+ |||+|+.
T Consensus 173 ~~D~iflD~fsp~--~~-p~lw~~~~l~~l~~~L~-pGG~l~t 211 (257)
T 2qy6_A 173 KVDAWFLDGFAPA--KN-PDMWTQNLFNAMARLAR-PGGTLAT 211 (257)
T ss_dssp CEEEEEECSSCTT--TC-GGGCCHHHHHHHHHHEE-EEEEEEE
T ss_pred eEEEEEECCCCcc--cC-hhhcCHHHHHHHHHHcC-CCcEEEE
Confidence 6999986332211 01 12 2578999999999 9999995
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.03 E-value=5.9e-06 Score=73.66 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=87.6
Q ss_pred CCCCCCCchHHHHHHhhcCChhhHHHHHHHHHHhhCCCCCCcccccCCCcc-HhHHHHHH-hCCCCeEEEEeCCHHHHHH
Q 045407 75 NPSTDMPSKFLLYQQSVQSPKGDISYLQKFFLIYVGGRQPLHLQEDFCGTA-LLSTEWLR-SDSRRTAVGLDLDLEALEW 152 (382)
Q Consensus 75 ~~~~~~p~~~~LYd~~vq~p~~Di~yl~~~f~~y~ggr~p~~LLEl~CGTG-~LS~elar-~g~~~tVvGVDLS~emL~~ 152 (382)
+.|+=.|-+++..+.+ ++||.+.+. .+.+++|+|||+| +.|..|++ .|. +|+++|+++.+++
T Consensus 10 ~~~~~~~~~~~m~e~L-------aeYI~~~~~------~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av~- 73 (153)
T 2k4m_A 10 HSSGLVPRGSHMWNDL-------AVYIIRCSG------PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHGG- 73 (153)
T ss_dssp CCCCCCCCCCHHHHHH-------HHHHHHHSC------SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSSTT-
T ss_pred ccCCcccchhhHHHHH-------HHHHHhcCC------CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccccc-
Confidence 4566677777774443 366655442 1346999999999 79999997 885 6999999995442
Q ss_pred HHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCC
Q 045407 153 CMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSS 232 (382)
Q Consensus 153 A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (382)
+++.|+.+|.. .+
T Consensus 74 ------------------~v~dDiF~P~~---------------~~---------------------------------- 86 (153)
T 2k4m_A 74 ------------------IVRDDITSPRM---------------EI---------------------------------- 86 (153)
T ss_dssp ------------------EECCCSSSCCH---------------HH----------------------------------
T ss_pred ------------------eEEccCCCCcc---------------cc----------------------------------
Confidence 78899988761 01
Q ss_pred CCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccCCCchhhh--hHhhhccCCeEEEEee
Q 045407 233 LPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQK--LRLQRRFANFTYVWEQ 302 (382)
Q Consensus 233 ~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~k--l~~~R~~~~~tyvWeq 302 (382)
...+|+|-+++ -+.+|...+..+++... --+|+=-.++...... +++..--....|+|+.
T Consensus 87 Y~~~DLIYsir-------PP~El~~~i~~lA~~v~---adliI~pL~~E~~~~~~~~kl~ny~g~~fY~~~~ 148 (153)
T 2k4m_A 87 YRGAALIYSIR-------PPAEIHSSLMRVADAVG---ARLIIKPLTGEDIVTERKMKLVNYGRTYFYEYIA 148 (153)
T ss_dssp HTTEEEEEEES-------CCTTTHHHHHHHHHHHT---CEEEEECBTTBCCCCCTTCEEEEETTEEEEEEEC
T ss_pred cCCcCEEEEcC-------CCHHHHHHHHHHHHHcC---CCEEEEcCCCCcCCCCCceEEEecCCceEEEEeh
Confidence 25789997766 35789999999998775 4555533333322211 2221101345677774
No 281
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.03 E-value=9.6e-06 Score=81.26 Aligned_cols=197 Identities=12% Similarity=0.122 Sum_probs=106.7
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc-ccCCCCcceEEEeccCCCchhhhhcccchhhh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK-VGADGYSRISLFHGNVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k-l~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~ 192 (382)
+..|+|+|||+|..|..++.. +++..+++.... .+. ....++++.-|.-.-++..+++.=|.-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~--------------ii~~i~~~~~~~~~~~-~~pe~~v~~nDLp~NDFN~lF~~L~~~- 116 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD--------------IVQSIDKVGQEKKNEL-ERPTIQIFLNDLFQNDFNSVFKLLPSF- 116 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH--------------HHHHHTCC-----------CEEEEEEECCTTSCHHHHHHHHHHH-
T ss_pred ceEEEecCCCCCchHHHHHHH--------------HHHHHHHHhhhcccCC-CCCceEEEecCCCccchHHHHhhhhhh-
Confidence 567999999999999988865 565555443110 111 123688888887655543443332210
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh-------------------
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA------------------- 253 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~------------------- 253 (382)
.+.+.- ......+.+.++..++..-.+-|+...+|+|++.. ++-||.+..
T Consensus 117 ~~~~~~----------~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~ 185 (384)
T 2efj_A 117 YRNLEK----------ENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSS 185 (384)
T ss_dssp HHHHHH----------HTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSC
T ss_pred Hhhhhh----------hccCCCCceEEEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEec
Confidence 000000 00000123445555555556778888999999986 555655432
Q ss_pred -----------------HHHHHHHHHHhhccCCCcEEEEeccCCCch--hhhhHhhhccCCeEEEEeecccccccceEEE
Q 045407 254 -----------------DLVLYFKHVLHALSKKGGIFVMDLYGGTSS--EQKLRLQRRFANFTYVWEQAEFDIIERKTRI 314 (382)
Q Consensus 254 -----------------dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~--e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri 314 (382)
|+...|+..++.|+ |||.||+-+.|..+. .... .. -+.-.|.. .....+
T Consensus 186 ~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~-pGG~mvl~~~gr~~~~~~~~~--~~---~l~~al~~----lv~eGl-- 253 (384)
T 2efj_A 186 KASRPPIQKAYLDQFTKDFTTFLRIHSEELI-SRGRMLLTFICKEDEFDHPNS--MD---LLEMSIND----LVIEGH-- 253 (384)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECCCTTTCCCCH--HH---HHHHHHHH----HHHHTS--
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCCcccCccc--HH---HHHHHHHH----HHHhCC--
Confidence 22233899999999 999999988763221 0000 00 00001211 000000
Q ss_pred EEEEEeecccceeeeeeeeeEEecCHHHHHHHHHHcC-CcEEEE
Q 045407 315 SLHFHLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAG-FRSVHF 357 (382)
Q Consensus 315 ~L~F~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAG-F~~V~v 357 (382)
+ .+. + ...|..-|...|++|++.+|+++| |+..++
T Consensus 254 -----i-~~e-k-~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 254 -----L-EEE-K-LDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp -----S-CHH-H-HHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred -----c-chh-h-hcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 0 000 1 111444567889999999999985 877775
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.01 E-value=6.4e-06 Score=78.03 Aligned_cols=62 Identities=11% Similarity=-0.010 Sum_probs=46.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccccc---CCCC---cceEEEeccCCCc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVG---ADGY---SRISLFHGNVLQP 179 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~---~d~~---~RI~l~~gDV~~~ 179 (382)
.+|||+|||+|..+..+|++|. +|+|||+++.+.+.++++... .. ...+ .+|.++++|+.+.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~-a~~~~~~~~~l~~~i~~~~~D~~~~ 157 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLAR-GYADAEIGGWLQERLQLIHASSLTA 157 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHH-HHHCTTTHHHHHHHEEEEESCHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHH-HHhhHhhhhhhhcCEEEEECCHHHH
Confidence 4799999999999999999985 699999999886666554211 00 0011 4799999998654
No 283
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.98 E-value=2.2e-05 Score=75.89 Aligned_cols=123 Identities=17% Similarity=0.063 Sum_probs=71.6
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhh
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVR 194 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~ 194 (382)
..|||||||+|-.+...+++..-..|+|+|++.++. .+.+. ...-+..+..++.++....
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~----~~pi~--~~~~g~~ii~~~~~~dv~~-------------- 135 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH----EKPMN--VQSLGWNIITFKDKTDIHR-------------- 135 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC----CCCCC--CCBTTGGGEEEECSCCTTT--------------
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc----ccccc--cCcCCCCeEEEeccceehh--------------
Confidence 469999999999999877653324688899886541 01110 0000113444555541111
Q ss_pred ccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc----ccCChhHHHHHHHHHHhhccCCC
Q 045407 195 NISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC----CLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~----yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
+...++|+|+|=. +.+ +... ......++-|.+.|+ ||
T Consensus 136 ------------------------------------l~~~~~DlVlsD~-apnsG~~~~D~-~rs~~LL~~a~~~Lk-pG 176 (277)
T 3evf_A 136 ------------------------------------LEPVKCDTLLCDI-GESSSSSVTEG-ERTVRVLDTVEKWLA-CG 176 (277)
T ss_dssp ------------------------------------SCCCCCSEEEECC-CCCCSCHHHHH-HHHHHHHHHHHHHHT-TC
T ss_pred ------------------------------------cCCCCccEEEecC-ccCcCchHHHH-HHHHHHHHHHHHHhC-CC
Confidence 2246799999843 333 3222 122233889999999 99
Q ss_pred -cEEEEeccC--CCchhhhhH-hhhccCCe
Q 045407 271 -GIFVMDLYG--GTSSEQKLR-LQRRFANF 296 (382)
Q Consensus 271 -GiFVfDl~g--g~s~e~kl~-~~R~~~~~ 296 (382)
|.||+.++. |..+...+. +++.|..+
T Consensus 177 ~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V 206 (277)
T 3evf_A 177 VDNFCVKVLAPYMPDVLEKLELLQRRFGGT 206 (277)
T ss_dssp CSEEEEEESCTTSHHHHHHHHHHHHHHCCE
T ss_pred CCeEEEEecCCCCccHHHHHHHHHHhcCCE
Confidence 999999998 554433222 23445443
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.91 E-value=7.5e-05 Score=81.55 Aligned_cols=43 Identities=14% Similarity=0.004 Sum_probs=36.5
Q ss_pred CCcccccCCCccHhHHHHHHhCC---CCeEEEEeCCHHHHHHH--HHh
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDS---RRTAVGLDLDLEALEWC--MEN 156 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~---~~tVvGVDLS~emL~~A--~e~ 156 (382)
..+|+|.|||||.+.+.+++... ..+++|+|+|+.+++.| +.+
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlN 369 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLG 369 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHH
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHH
Confidence 45799999999999999998753 24799999999999999 544
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.85 E-value=4.5e-05 Score=73.96 Aligned_cols=56 Identities=20% Similarity=0.143 Sum_probs=49.3
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..++|..||+|.+|..+++++ .+|+|+|.|++||+.|++ . . + .|+.++++|..++.
T Consensus 24 g~~VD~T~G~GGHS~~il~~~--g~VigiD~Dp~Ai~~A~~-L-~----~--~rv~lv~~~f~~l~ 79 (285)
T 1wg8_A 24 GVYVDATLGGAGHARGILERG--GRVIGLDQDPEAVARAKG-L-H----L--PGLTVVQGNFRHLK 79 (285)
T ss_dssp CEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHH-T-C----C--TTEEEEESCGGGHH
T ss_pred CEEEEeCCCCcHHHHHHHHCC--CEEEEEeCCHHHHHHHHh-h-c----c--CCEEEEECCcchHH
Confidence 468999999999999999984 589999999999999998 4 2 1 48999999998876
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.84 E-value=2.7e-05 Score=74.89 Aligned_cols=126 Identities=13% Similarity=0.003 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhC-----CCCeEEEEeCCH------------------------
Q 045407 97 DISYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSD-----SRRTAVGLDLDL------------------------ 147 (382)
Q Consensus 97 Di~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g-----~~~tVvGVDLS~------------------------ 147 (382)
.+..|..+++.......|..|+|+||.+|.-++.+++.- +.++|+++|...
T Consensus 90 r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~ 169 (282)
T 2wk1_A 90 RLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSV 169 (282)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccccccc
Confidence 445666666654334568899999999999877766431 246899999642
Q ss_pred --HHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCC
Q 045407 148 --EALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDN 225 (382)
Q Consensus 148 --emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (382)
.+++.++++. ++.+- ...+|.++.||..+..
T Consensus 170 ~~~~~~~ar~n~-~~~gl-~~~~I~li~Gda~etL--------------------------------------------- 202 (282)
T 2wk1_A 170 LAVSEEEVRRNF-RNYDL-LDEQVRFLPGWFKDTL--------------------------------------------- 202 (282)
T ss_dssp HCCCHHHHHHHH-HHTTC-CSTTEEEEESCHHHHS---------------------------------------------
T ss_pred chhHHHHHHHHH-HHcCC-CcCceEEEEeCHHHHH---------------------------------------------
Confidence 1466677653 22221 0158999999974422
Q ss_pred cCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccC
Q 045407 226 CSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYG 279 (382)
Q Consensus 226 ~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~g 279 (382)
..+...+||+|..=.+. | +....+|..++..|+ |||++|+|=++
T Consensus 203 ---~~~~~~~~d~vfIDaD~--y----~~~~~~Le~~~p~L~-pGGiIv~DD~~ 246 (282)
T 2wk1_A 203 ---PTAPIDTLAVLRMDGDL--Y----ESTWDTLTNLYPKVS-VGGYVIVDDYM 246 (282)
T ss_dssp ---TTCCCCCEEEEEECCCS--H----HHHHHHHHHHGGGEE-EEEEEEESSCT
T ss_pred ---hhCCCCCEEEEEEcCCc--c----ccHHHHHHHHHhhcC-CCEEEEEcCCC
Confidence 00113457776655442 3 456789999999999 99999997663
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.84 E-value=3e-05 Score=77.85 Aligned_cols=115 Identities=9% Similarity=0.014 Sum_probs=78.8
Q ss_pred CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC----C-CCcceEEEeccCCCchhhhhccc
Q 045407 113 QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA----D-GYSRISLFHGNVLQPLEAKLVRY 187 (382)
Q Consensus 113 ~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~----d-~~~RI~l~~gDV~~~~~~~~~~~ 187 (382)
.|.+||=+|-|.|.++.++++... .+|+.||||++++++|++.... +.. + ...|+.++.+|-+.+..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~-~~~~~~d~pr~~rv~vii~Da~~fl~------ 276 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRK-TCGDVLDNLKGDCYQVLIEDCIPVLK------ 276 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC-----CCSSSEETTEEEEESCHHHHHH------
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchh-hhhhhhccccccceeeehHHHHHHHH------
Confidence 377899999999999999999876 5899999999999999997422 111 0 12368899999765541
Q ss_pred chhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc------ccCChhHHHHHHHH
Q 045407 188 EPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC------CLHKRADLVLYFKH 261 (382)
Q Consensus 188 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~------yL~~r~dL~~yFr~ 261 (382)
+..- ...+||+|+.=.+.-. .+...-=-..+|+.
T Consensus 277 -------~~~~---------------------------------~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~ 316 (381)
T 3c6k_A 277 -------RYAK---------------------------------EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL 316 (381)
T ss_dssp -------HHHH---------------------------------HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH
T ss_pred -------hhhh---------------------------------ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHH
Confidence 0000 0356999987533211 11111112567899
Q ss_pred HHhhccCCCcEEEEe
Q 045407 262 VLHALSKKGGIFVMD 276 (382)
Q Consensus 262 V~~~L~~pGGiFVfD 276 (382)
++++|+ |||+||+-
T Consensus 317 ~~~~L~-p~GVlv~Q 330 (381)
T 3c6k_A 317 SMKVLK-QDGKYFTQ 330 (381)
T ss_dssp HHHTEE-EEEEEEEE
T ss_pred HHHhcC-CCCEEEEe
Confidence 999999 99999984
No 288
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.81 E-value=3.3e-05 Score=73.18 Aligned_cols=43 Identities=21% Similarity=0.159 Sum_probs=39.0
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLN 159 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~ 159 (382)
..|||+|||||.++...++.| ++++|+|++++|++.|+++...
T Consensus 237 ~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 237 DVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHH
Confidence 479999999999999999998 4799999999999999998643
No 289
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.60 E-value=5.8e-05 Score=74.99 Aligned_cols=194 Identities=13% Similarity=0.157 Sum_probs=100.7
Q ss_pred CCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhh
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQK 191 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~ 191 (382)
..+..|+|+||++|..|..+...- ++.-+++... .+......++++.-|.-.=++..+++.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~i--------------i~~i~~~~~~-~~~~~~pe~~v~~nDLp~NDFntlF~~---- 110 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTEL--------------IKTVEELRKK-MGRENSPEYQIFLNDLPGNDFNAIFRS---- 110 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTT--------------HHHHHHHHHS-SSCSSCCEEEEEEEECTTSCHHHHHTT----
T ss_pred CCceEEEecCCCCCcchHHHHHHH--------------HHHHHHHHHh-cCCCCCCceEEEecCCCchHHHHHHHh----
Confidence 345779999999999988766542 2222222110 111011357777766433332222211
Q ss_pred hhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCCh-------------------
Q 045407 192 LVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKR------------------- 252 (382)
Q Consensus 192 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r------------------- 252 (382)
|.... ...+.+.++..++..-.+-|+...+|+|++.. ++-||.+.
T Consensus 111 ----L~~~~-----------~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~ 174 (359)
T 1m6e_X 111 ----LPIEN-----------DVDGVCFINGVPGSFYGRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQ 174 (359)
T ss_dssp ----TTTSC-----------SCTTCEEEEEEESCSSSCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCC
T ss_pred ----cchhc-----------ccCCCEEEEecchhhhhccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCH
Confidence 11100 00012333333444445667778899999986 55555542
Q ss_pred -----------hHHHHHHHHHHhhccCCCcEEEEeccCCCchhhhhHhhhccCCeEEEEeecc--c-ccccceEEEEEEE
Q 045407 253 -----------ADLVLYFKHVLHALSKKGGIFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAE--F-DIIERKTRISLHF 318 (382)
Q Consensus 253 -----------~dL~~yFr~V~~~L~~pGGiFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~--f-D~~~~~~ri~L~F 318 (382)
.|+...|+..++.|+ |||.||+=+.|-.+... . ..+..++|+.-. . |.....+
T Consensus 175 ~v~~ay~~Qf~~D~~~FL~~Ra~EL~-pGG~mvl~~~gr~~~~~-~-----~~~~~~~~~~l~~al~~mv~eGl------ 241 (359)
T 1m6e_X 175 SVLNAYYKQFQEDHALFLRCRAQEVV-PGGRMVLTILGRRSEDR-A-----STECCLIWQLLAMALNQMVSEGL------ 241 (359)
T ss_dssp TTSCCSHHHHHHHHHHHHHHHHHHBC-TTCEEEEEEEECSSSSS-S-----STTTSTTTHHHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEecCCCCCc-c-----ccchHHHHHHHHHHHHHHHHccc------
Confidence 366777999999999 99999998775222100 0 001111221100 0 0000000
Q ss_pred EeecccceeeeeeeeeEEecCHHHHHHHHHHcCC-cEEEE
Q 045407 319 HLQKEQKKLRHAFSYNWRLWSLPEIKDCLEEAGF-RSVHF 357 (382)
Q Consensus 319 ~~~~~~~~lr~~fsy~~Rlysl~EI~d~LeeAGF-~~V~v 357 (382)
+ .+. + ...|..-|...|++|++.+++++|+ +..++
T Consensus 242 -i-~~e-k-~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 242 -I-EEE-K-MDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp -S-CCS-T-TGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred -c-chh-h-hhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 0 010 1 1135566788999999999999965 55543
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.34 E-value=0.00011 Score=71.08 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=28.1
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHH
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEA 149 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~em 149 (382)
..|||||||+|-.+...++...-..|+|+|++..+
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 36999999999999987754333479999999864
No 291
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.16 E-value=0.00078 Score=62.54 Aligned_cols=41 Identities=15% Similarity=0.081 Sum_probs=37.8
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENN 157 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~ 157 (382)
..|||.|||+|..+...++.| ++++|+|+++.+++.|+++.
T Consensus 214 ~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 214 DLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp CEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHH
Confidence 479999999999999999998 57999999999999999985
No 292
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.15 E-value=0.0018 Score=64.15 Aligned_cols=56 Identities=20% Similarity=0.124 Sum_probs=47.7
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..++|||||.|-++..+.+.|.. .|.++|+++.+++..+.|.. ...++++|+.++.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~-~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~ 58 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD-VKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLN 58 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE-EEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCc-EEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcC
Confidence 35899999999999999999974 67899999999998888751 3568899998775
No 293
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.08 E-value=0.0024 Score=61.45 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=49.8
Q ss_pred CCCCCCcccccCCCccHhHHHHHHhCCCCe-EEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 110 GGRQPLHLQEDFCGTALLSTEWLRSDSRRT-AVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 110 ggr~p~~LLEl~CGTG~LS~elar~g~~~t-VvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..+.+..++|||||.|-++..+.+.|.+.. |.++|+|+.+.+.-+.|.. ...++++||+++.
T Consensus 12 ~~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~ 74 (295)
T 2qrv_A 12 EKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVT 74 (295)
T ss_dssp CCCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCC
T ss_pred ccCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHcc
Confidence 344466899999999999999999998633 6999999999988777741 2357889998876
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.00 E-value=0.0022 Score=62.57 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=28.4
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHH
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEA 149 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~em 149 (382)
..++||||++|-.+..++++..-..|+|+|+...+
T Consensus 83 ~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~ 117 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEG 117 (300)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred CEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccc
Confidence 47999999999999999975333468999998643
No 295
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.97 E-value=0.0012 Score=65.52 Aligned_cols=58 Identities=17% Similarity=0.122 Sum_probs=49.4
Q ss_pred CcccccCCCccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..++|.-||+|-+|..++++ ++..+|+|+|.|++||+.|+ + +. ..|+.|+++|..++.
T Consensus 59 giyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-r----L~---~~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 59 GIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-T----ID---DPRFSIIHGPFSALG 117 (347)
T ss_dssp CEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-T----CC---CTTEEEEESCGGGHH
T ss_pred CEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-h----hc---CCcEEEEeCCHHHHH
Confidence 46889999999999999987 67789999999999999883 3 21 258999999988775
No 296
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.92 E-value=0.0051 Score=60.04 Aligned_cols=121 Identities=18% Similarity=0.224 Sum_probs=81.3
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhcccc------ccCC-----------CCcceEEEeccC
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNK------VGAD-----------GYSRISLFHGNV 176 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~k------l~~d-----------~~~RI~l~~gDV 176 (382)
...|+.||||.....-++...+++.+++-||+ |+++++-++...+. ++.. ...+..++-+|+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 35688999999999999998755667888888 88998877653221 1100 024788999999
Q ss_pred CCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHH
Q 045407 177 LQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLV 256 (382)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~ 256 (382)
+++.|... +...+. ....+-++++-+ ++.||.. +++.
T Consensus 177 ~d~~w~~~-------ll~~~~----------------------------------d~~~Ptl~iaEg-vL~YL~~-~~~~ 213 (334)
T 1rjd_A 177 NDITETTR-------LLDVCT----------------------------------KREIPTIVISEC-LLCYMHN-NESQ 213 (334)
T ss_dssp TCHHHHHH-------HHHTTC----------------------------------CTTSCEEEEEES-CGGGSCH-HHHH
T ss_pred CCcHHHHH-------HHHhcC----------------------------------CCCCCEEEEEcc-hhhCCCH-HHHH
Confidence 99887311 000000 023355666665 7788664 7889
Q ss_pred HHHHHHHhhccCCCcEE-EEeccCC
Q 045407 257 LYFKHVLHALSKKGGIF-VMDLYGG 280 (382)
Q Consensus 257 ~yFr~V~~~L~~pGGiF-VfDl~gg 280 (382)
+.|+.+...+. +|.| ++|..+.
T Consensus 214 ~ll~~ia~~~~--~~~~v~~e~i~~ 236 (334)
T 1rjd_A 214 LLINTIMSKFS--HGLWISYDPIGG 236 (334)
T ss_dssp HHHHHHHHHCS--SEEEEEEEECCC
T ss_pred HHHHHHHhhCC--CcEEEEEeccCC
Confidence 99999998774 6766 5787654
No 297
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.83 E-value=0.0035 Score=60.91 Aligned_cols=55 Identities=16% Similarity=0.030 Sum_probs=45.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
...++|||||+|.++..+.+.|.+ .|.++|+|+.+++..+.|... . .++|++++.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~-~v~~~e~d~~a~~t~~~N~~~---------~--~~~Di~~~~ 65 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAE-CVYSNEWDKYAQEVYEMNFGE---------K--PEGDITQVN 65 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCE-EEEEECCCHHHHHHHHHHHSC---------C--CBSCGGGSC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCe-EEEEEeCCHHHHHHHHHHcCC---------C--CcCCHHHcC
Confidence 356899999999999999999985 799999999999998888521 1 168887765
No 298
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.81 E-value=0.00083 Score=65.37 Aligned_cols=58 Identities=17% Similarity=0.122 Sum_probs=48.2
Q ss_pred CCcccccCCCccHhHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+..++|||||+|-++..+.+.|.. ..|+++|+++.+++..+.|.. ...++++|+.++.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---------~~~~~~~Di~~~~ 60 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---------HTQLLAKTIEGIT 60 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECSCGGGCC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---------ccccccCCHHHcc
Confidence 456899999999999999999932 369999999999999999862 2347889998765
No 299
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.78 E-value=0.0052 Score=63.39 Aligned_cols=62 Identities=15% Similarity=0.008 Sum_probs=42.7
Q ss_pred CcccccCCCccHhHHHHHHhC-------------CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSD-------------SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g-------------~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|+|.+||||.+.+...+.- ....+.|+|+++.+..+|+-+..- .. ...-.+.++|-+..+
T Consensus 219 ~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l--hg--~~~~~I~~~dtL~~~ 293 (530)
T 3ufb_A 219 ESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL--HG--LEYPRIDPENSLRFP 293 (530)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH--HT--CSCCEEECSCTTCSC
T ss_pred CEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh--cC--CccccccccccccCc
Confidence 379999999999987654321 123699999999999999877432 11 122356788866543
No 300
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.76 E-value=0.0017 Score=64.40 Aligned_cols=65 Identities=6% Similarity=-0.116 Sum_probs=50.2
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCC---CCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGAD---GYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d---~~~RI~l~~gDV~~~~ 180 (382)
.+|||+++|+|-=|+.+|..+....|+++|+|+.-|...+++... ++.. ....|.+.+.|.+.+.
T Consensus 150 ~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r-~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 150 DIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHS-YVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp EEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHH-HSCTTTTTSSSEEEECCCGGGHH
T ss_pred CEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHH-hhhhhhccCCceEEEeCchhhcc
Confidence 479999999999999999998877899999999999888776422 2211 1246788888876654
No 301
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.30 E-value=0.005 Score=58.22 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=45.8
Q ss_pred cccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.++|||||-|-++.-|-+.|.+ .|.++|+|+.+.+.-+.|.. -.++++|++++.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~-~v~a~e~d~~a~~ty~~N~~----------~~~~~~DI~~i~ 55 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFR-IICANEYDKSIWKTYESNHS----------AKLIKGDISKIS 55 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCE-EEEEEECCTTTHHHHHHHCC----------SEEEESCGGGCC
T ss_pred eEEEeCcCccHHHHHHHHCCCE-EEEEEeCCHHHHHHHHHHCC----------CCcccCChhhCC
Confidence 4789999999999999999985 78899999999998887752 146889998776
No 302
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.29 E-value=0.04 Score=53.16 Aligned_cols=133 Identities=8% Similarity=-0.088 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
.|+.++++.++.. .+.-|+.||||-=...-++.. ....+++=|| .|+++++.++.. ...+.....+..++.+|+++
T Consensus 89 ~~~d~~v~~~~~~-g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL-~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 89 NFFDTYFNNAVID-GIRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTL-AEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHH-HHTTCCCSSEEEEEECCTTS
T ss_pred HHHHHHHHHHHHh-CCCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHH-HhcCCCCCCCeEEEecchHh
Confidence 4666666665422 245689999997776666542 2235899999 599999988874 22222234578899999998
Q ss_pred chhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHH
Q 045407 179 PLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLY 258 (382)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~y 258 (382)
.|...+ .. ..|... .-+++.+.-.+.||.. ++....
T Consensus 165 -~~~~~l-------~~----------------------------------~g~d~~-~Pt~~i~Egvl~Yl~~-~~~~~l 200 (310)
T 2uyo_A 165 -DWPPAL-------RS----------------------------------AGFDPS-ARTAWLAEGLLMYLPA-TAQDGL 200 (310)
T ss_dssp -CHHHHH-------HH----------------------------------TTCCTT-SCEEEEECSCGGGSCH-HHHHHH
T ss_pred -hHHHHH-------Hh----------------------------------ccCCCC-CCEEEEEechHhhCCH-HHHHHH
Confidence 653210 00 011112 2355555568888877 588999
Q ss_pred HHHHHhhccCCCcEEEEeccCC
Q 045407 259 FKHVLHALSKKGGIFVMDLYGG 280 (382)
Q Consensus 259 Fr~V~~~L~~pGGiFVfDl~gg 280 (382)
++.+.+.+. +|+.++||..+.
T Consensus 201 l~~l~~~~~-~gs~l~~d~~~~ 221 (310)
T 2uyo_A 201 FTEIGGLSA-VGSRIAVETSPL 221 (310)
T ss_dssp HHHHHHTCC-TTCEEEEECCCT
T ss_pred HHHHHHhCC-CCeEEEEEecCC
Confidence 999999988 899999998754
No 303
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.23 E-value=0.01 Score=57.73 Aligned_cols=57 Identities=18% Similarity=0.109 Sum_probs=46.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCCC-eE-EEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRR-TA-VGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~-tV-vGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+..++|||||.|-++.-+.+.|... .| .++|+|+.+.+.-+.|... . ++++|++++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---------~-~~~~DI~~~~ 68 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---------E-VQVKNLDSIS 68 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---------C-CBCCCTTTCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---------C-cccCChhhcC
Confidence 5678999999999999999999532 45 6999999999998888621 1 5788998876
No 304
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.04 E-value=0.0066 Score=58.44 Aligned_cols=63 Identities=22% Similarity=0.148 Sum_probs=34.8
Q ss_pred CCccEEEEccc--hhcccCChhHHHHHHHHHHhhccCCCc-EEEEeccCCC--chhhhh-HhhhccCCeE
Q 045407 234 PARDIICAFNY--SCCCLHKRADLVLYFKHVLHALSKKGG-IFVMDLYGGT--SSEQKL-RLQRRFANFT 297 (382)
Q Consensus 234 ~~fDiV~afn~--S~~yL~~r~dL~~yFr~V~~~L~~pGG-iFVfDl~gg~--s~e~kl-~~~R~~~~~t 297 (382)
.++|+|+|=-. |=+...+.+--..++.-+.+.|+ ||| -||+=++.|. .+...+ .+++.|..+.
T Consensus 138 ~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk-~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~vk 206 (269)
T 2px2_A 138 EISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLS-RGPKEFCIKILCPYMPKVIEKLESLQRRFGGGL 206 (269)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEE
T ss_pred CCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhh-cCCcEEEEEECCCCchHHHHHHHHHHHHcCCEE
Confidence 46788886431 11111222212225667778999 899 9999988763 232212 2345565544
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.00 E-value=0.013 Score=57.99 Aligned_cols=81 Identities=10% Similarity=0.018 Sum_probs=59.0
Q ss_pred cCChhhHHHHHHHHHHhhCCC------CCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCC
Q 045407 92 QSPKGDISYLQKFFLIYVGGR------QPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADG 165 (382)
Q Consensus 92 q~p~~Di~yl~~~f~~y~ggr------~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~ 165 (382)
|+---|-.-+.++... ++-. ....|+|+|.|+|.||..|++++...+|++|.+|..++..-++.. .
T Consensus 32 QnFL~d~~i~~~Iv~~-~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~------ 103 (353)
T 1i4w_A 32 FKYLWNPTVYNKIFDK-LDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E------ 103 (353)
T ss_dssp CCCBCCHHHHHHHHHH-HCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T------
T ss_pred cCccCCHHHHHHHHHh-ccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c------
Confidence 4444455556666654 3211 125799999999999999998743247999999999998877763 1
Q ss_pred CcceEEEeccCCCch
Q 045407 166 YSRISLFHGNVLQPL 180 (382)
Q Consensus 166 ~~RI~l~~gDV~~~~ 180 (382)
+.++.++++|++.++
T Consensus 104 ~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 104 GSPLQILKRDPYDWS 118 (353)
T ss_dssp TSSCEEECSCTTCHH
T ss_pred CCCEEEEECCccchh
Confidence 258999999997765
No 306
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.82 E-value=0.013 Score=56.71 Aligned_cols=55 Identities=11% Similarity=0.137 Sum_probs=45.3
Q ss_pred cccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 116 HLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 116 ~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
.+||+++|||.|+.+.++++ .+++-||+++..++.-++|. . . ..++.++++|+..
T Consensus 94 ~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl-~---~--~~~~~V~~~D~~~ 148 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLP-H---F--NKKVYVNHTDGVS 148 (283)
T ss_dssp SSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSC-C---T--TSCEEEECSCHHH
T ss_pred CceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHh-C---c--CCcEEEEeCcHHH
Confidence 47999999999999999966 47999999999999777763 2 1 2579999999744
No 307
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=95.69 E-value=0.0098 Score=59.63 Aligned_cols=52 Identities=2% Similarity=-0.035 Sum_probs=39.9
Q ss_pred cccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++||||.+|-.|-.++++|. .|+|||+.+ |++-... . .+|.++++|.....
T Consensus 214 ~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~--l~~~l~~-------~--~~V~~~~~d~~~~~ 265 (375)
T 4auk_A 214 WAVDLGACPGGWTYQLVKRNM--WVYSVDNGP--MAQSLMD-------T--GQVTWLREDGFKFR 265 (375)
T ss_dssp EEEEETCTTCHHHHHHHHTTC--EEEEECSSC--CCHHHHT-------T--TCEEEECSCTTTCC
T ss_pred EEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh--cChhhcc-------C--CCeEEEeCcccccc
Confidence 689999999999999999984 799999875 3322211 1 37999999976544
No 308
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.58 E-value=0.018 Score=55.24 Aligned_cols=55 Identities=11% Similarity=0.041 Sum_probs=43.5
Q ss_pred HHHHHHHHHhhCCCCCCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhc
Q 045407 99 SYLQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENN 157 (382)
Q Consensus 99 ~yl~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~ 157 (382)
..+..+++.+. .....|||.|||+|..+..-.+.| +..+|+|+++.+.+.|+++.
T Consensus 240 ~l~~~~i~~~~--~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 240 KLPEFFIRMLT--EPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp HHHHHHHHHHC--CTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGG
T ss_pred HHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHH
Confidence 44555555432 113469999999999999988888 57999999999999999985
No 309
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.49 E-value=0.026 Score=58.01 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=47.3
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
..++|||||.|-++.-|.+.|.+ .|.++|+|+.+.+.-+.|... . ....++++|++++.
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~-~v~avE~d~~A~~ty~~N~~~----~--p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQ-CVFTSEWNKHAVRTYKANHYC----D--PATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEE-EEEEECCCHHHHHHHHHHSCC----C--TTTCEEESCTHHHH
T ss_pred ceEEEecCCccHHHHHHHHCCCE-EEEEEeCCHHHHHHHHHhccc----C--CCcceeccchhhhh
Confidence 56899999999999999999985 799999999999888777521 1 12346789997765
No 310
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.42 E-value=0.034 Score=54.69 Aligned_cols=107 Identities=11% Similarity=0.052 Sum_probs=65.8
Q ss_pred CcccccCCCccHhHH-HHHHhCCCCeEEEEeCCHHHHHHHHHh--ccccccCCCCcceEEEec-cCCCchhhhhcccchh
Q 045407 115 LHLQEDFCGTALLST-EWLRSDSRRTAVGLDLDLEALEWCMEN--NLNKVGADGYSRISLFHG-NVLQPLEAKLVRYEPQ 190 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~-elar~g~~~tVvGVDLS~emL~~A~e~--~~~kl~~d~~~RI~l~~g-DV~~~~~~~~~~~~~~ 190 (382)
..|+||||+||-.+. ...+.|.. .|+|+|+-..-- +. ..+.+ +..-|.|+++ ||..+.
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~gv~-~V~avdvG~~~h----e~P~~~~ql---~w~lV~~~~~~Dv~~l~---------- 157 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKRVQ-EVRGYTKGGPGH----EEPQLVQSY---GWNIVTMKSGVDVFYRP---------- 157 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTTEE-EEEEECCCSTTS----CCCCCCCBT---TGGGEEEECSCCTTSSC----------
T ss_pred CEEEEeCCCCCcHHHHHHhhcCCC-EEEEEEcCCCCc----cCcchhhhc---CCcceEEEeccCHhhCC----------
Confidence 369999999999999 55556654 799999987300 00 00001 1123677777 776554
Q ss_pred hhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc--ccCChhHHHHHHHHHHhhccC
Q 045407 191 KLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC--CLHKRADLVLYFKHVLHALSK 268 (382)
Q Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~--yL~~r~dL~~yFr~V~~~L~~ 268 (382)
..++|+|+|=.---+ -..+.+--.++|.-+.+.|+
T Consensus 158 ------------------------------------------~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~- 194 (321)
T 3lkz_A 158 ------------------------------------------SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLH- 194 (321)
T ss_dssp ------------------------------------------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-
T ss_pred ------------------------------------------CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhc-
Confidence 345888887543111 11111122336666678898
Q ss_pred CC-cEEEEeccCCCc
Q 045407 269 KG-GIFVMDLYGGTS 282 (382)
Q Consensus 269 pG-GiFVfDl~gg~s 282 (382)
+| |-|++=++.|+.
T Consensus 195 ~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 195 RGPREFCVKVLCPYM 209 (321)
T ss_dssp TCCCEEEEEESCTTS
T ss_pred cCCCcEEEEEcCCCC
Confidence 78 999999998743
No 311
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.05 E-value=0.035 Score=53.66 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=37.5
Q ss_pred CcccccCCCccHhHHHHHHhCCCCeEEEEeCCH---HHHHHHHHhcc
Q 045407 115 LHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDL---EALEWCMENNL 158 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~---emL~~A~e~~~ 158 (382)
..|||.|||+|..+..-.+.| +..+|+||++ +..+.|+++..
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHH
Confidence 469999999999999999888 5799999999 99999999853
No 312
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.03 E-value=0.02 Score=55.88 Aligned_cols=58 Identities=17% Similarity=0.207 Sum_probs=47.6
Q ss_pred CCcccccCCCccHhHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+..++|||||.|-++..+.+.|.. ..|.++|+|+.+.+.-+.|.. ...++++|+.++.
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~---------~~~~~~~DI~~~~ 61 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP---------ETNLLNRNIQQLT 61 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECCCGGGCC
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC---------CCceeccccccCC
Confidence 567899999999999999999963 257899999999998888752 2346789998776
No 313
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.59 E-value=0.15 Score=48.36 Aligned_cols=125 Identities=15% Similarity=0.106 Sum_probs=76.0
Q ss_pred HHHHHHHhhCCCCCCcccccCCCccHhHHHHHHh-------CCCCeEEEEe-----CCH---------------------
Q 045407 101 LQKFFLIYVGGRQPLHLQEDFCGTALLSTEWLRS-------DSRRTAVGLD-----LDL--------------------- 147 (382)
Q Consensus 101 l~~~f~~y~ggr~p~~LLEl~CGTG~LS~elar~-------g~~~tVvGVD-----LS~--------------------- 147 (382)
+..+|++ + ...|..|+|.||-.|.-+..+++. ++.++|+|+| -.+
T Consensus 59 ~~~l~~~-i-~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~ 136 (257)
T 3tos_A 59 MDALYRQ-V-LDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGY 136 (257)
T ss_dssp HHHHHHH-T-TTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTH
T ss_pred HHHHHHH-h-hCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchh
Confidence 3455555 2 245888999999999988887652 5667999999 211
Q ss_pred -HHHHHHHH--hccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCC
Q 045407 148 -EALEWCME--NNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGD 224 (382)
Q Consensus 148 -emL~~A~e--~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (382)
+.|....+ .+..+++.. ..+|.|+.|+..+-... . +..
T Consensus 137 ~~~l~~~l~~~~~~~~~g~~-~~~i~li~G~~~dTL~~-~--------l~~----------------------------- 177 (257)
T 3tos_A 137 PAYLKEVLDAHECSDFFGHV-TQRSVLVEGDVRETVPR-Y--------LAE----------------------------- 177 (257)
T ss_dssp HHHHHHHHHHHHTTSTTTTS-CCSEEEEESCHHHHHHH-H--------HHH-----------------------------
T ss_pred HHHHHHHHHHHhhhhhcCCC-CCcEEEEEecHHHHHHH-H--------HHh-----------------------------
Confidence 12222111 011122221 24789999987543200 0 000
Q ss_pred CcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEeccC
Q 045407 225 NCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMDLYG 279 (382)
Q Consensus 225 ~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfDl~g 279 (382)
.+.+++|+|..=.+ .| +....+|..++..|+ |||++|||=++
T Consensus 178 ------~~~~~~dlv~ID~D--~Y----~~t~~~le~~~p~l~-~GGvIv~DD~~ 219 (257)
T 3tos_A 178 ------NPQTVIALAYFDLD--LY----EPTKAVLEAIRPYLT-KGSIVAFDELD 219 (257)
T ss_dssp ------CTTCCEEEEEECCC--CH----HHHHHHHHHHGGGEE-EEEEEEESSTT
T ss_pred ------CCCCceEEEEEcCc--cc----chHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 01234676665554 24 567889999999999 99999998764
No 314
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.39 E-value=0.13 Score=50.74 Aligned_cols=28 Identities=11% Similarity=0.206 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhccCCCcEEEEeccCCCch
Q 045407 255 LVLYFKHVLHALSKKGGIFVMDLYGGTSS 283 (382)
Q Consensus 255 L~~yFr~V~~~L~~pGGiFVfDl~gg~s~ 283 (382)
....+.=+.++|+ |||-||+=++-|...
T Consensus 196 ~ElALdfA~~~Lk-pGGsFvVKVFQGsg~ 223 (344)
T 3r24_A 196 FTYLCGFIKQKLA-LGGSIAVKITEHSWN 223 (344)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEECSSSCC
T ss_pred HHHHHHHHHHhCc-CCCEEEEEEecCCCH
Confidence 3556667788999 999999999866543
No 315
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=93.39 E-value=0.35 Score=46.39 Aligned_cols=123 Identities=15% Similarity=0.077 Sum_probs=73.6
Q ss_pred CcccccCCCccHhHH-HHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEec-cCCCchhhhhcccchhhh
Q 045407 115 LHLQEDFCGTALLST-EWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHG-NVLQPLEAKLVRYEPQKL 192 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~-elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~g-DV~~~~~~~~~~~~~~~~ 192 (382)
..|+||||++|-.|. ...+.|.. .|+|+|+-..-- +. ......-+..-|.|.++ ||....
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g~~-~V~avdvG~~gh----e~-P~~~~s~gwn~v~fk~gvDv~~~~------------ 141 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKKVT-EVRGYTKGGPGH----EE-PVPMSTYGWNIVKLMSGKDVFYLP------------ 141 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEE-EEEEECCCSTTS----CC-CCCCCCTTTTSEEEECSCCGGGCC------------
T ss_pred CEEEEcCCCCCcHHHHHHHhcCCC-EEEEEecCCCCc----cC-cchhhhcCcCceEEEeccceeecC------------
Confidence 468999999999999 44455554 899999976211 00 00111123345888888 873332
Q ss_pred hhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhc--ccCChhHHHHHHHHHHhhccCCC
Q 045407 193 VRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCC--CLHKRADLVLYFKHVLHALSKKG 270 (382)
Q Consensus 193 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~--yL~~r~dL~~yFr~V~~~L~~pG 270 (382)
..++|.|+|=.-=-+ -..+.+--.++|.-+.+.|+ +
T Consensus 142 ----------------------------------------~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~-~- 179 (267)
T 3p8z_A 142 ----------------------------------------PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLK-N- 179 (267)
T ss_dssp ----------------------------------------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCS-S-
T ss_pred ----------------------------------------CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhcc-c-
Confidence 245888887543211 01111122336666678898 6
Q ss_pred cEEEEeccCCCc--hhhhh-HhhhccCCeE
Q 045407 271 GIFVMDLYGGTS--SEQKL-RLQRRFANFT 297 (382)
Q Consensus 271 GiFVfDl~gg~s--~e~kl-~~~R~~~~~t 297 (382)
|-|++=++.|+. +..++ .+++.|.+..
T Consensus 180 ~~fc~KVl~py~p~v~e~l~~lq~~fgg~l 209 (267)
T 3p8z_A 180 NQFCIKVLNPYMPTVIEHLERLQRKHGGML 209 (267)
T ss_dssp CEEEEEESCCCSHHHHHHHHHHHHHHCCEE
T ss_pred CCEEEEEccCCChhHHHHHHHHHHHhCCEe
Confidence 899999987776 43333 3466666644
No 316
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.94 E-value=0.42 Score=50.79 Aligned_cols=56 Identities=14% Similarity=0.024 Sum_probs=44.7
Q ss_pred CCcccccCCCccHhHHHHHHhC------CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSD------SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g------~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
.+.|+|||||-|-++.-|.+.| .+ .+.++|+|+.+.+-=+.|+. ...++++|+.++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~-vv~AvE~d~~A~~Ty~~Nhp---------~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLE-TRWAVDFNSFACQSLKYNHP---------QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEE-EEEEEESCHHHHHHHHHHCT---------TSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCcee-EEEEEeCCHHHHHHHHHHCC---------CCceecCcHHHh
Confidence 4679999999999999998887 43 68899999999988877752 245677777554
No 317
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.37 E-value=1 Score=38.83 Aligned_cols=87 Identities=11% Similarity=0.021 Sum_probs=57.1
Q ss_pred hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchhhhhcccchhhhhhccccccccCccc
Q 045407 127 LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLEAKLVRYEPQKLVRNISLEECDNTLE 206 (382)
Q Consensus 127 LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (382)
++..|+++|+ +|++++.+++-+.... . .++.++++|+.++.. ..
T Consensus 16 l~~~L~~~g~--~V~~~~R~~~~~~~~~--------~---~~~~~~~~D~~d~~~-~~---------------------- 59 (224)
T 3h2s_A 16 IVAEARRRGH--EVLAVVRDPQKAADRL--------G---ATVATLVKEPLVLTE-AD---------------------- 59 (224)
T ss_dssp HHHHHHHTTC--EEEEEESCHHHHHHHT--------C---TTSEEEECCGGGCCH-HH----------------------
T ss_pred HHHHHHHCCC--EEEEEEeccccccccc--------C---CCceEEecccccccH-hh----------------------
Confidence 3455667774 7999999997764211 1 268899999987761 00
Q ss_pred cchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEE
Q 045407 207 TSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVf 275 (382)
...+|+|+.+.-..+--......+...+++.+++++.|+.||+
T Consensus 60 --------------------------~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~ 102 (224)
T 3h2s_A 60 --------------------------LDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVF 102 (224)
T ss_dssp --------------------------HTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEE
T ss_pred --------------------------cccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEE
Confidence 3457988877644311122344667778888888867777777
No 318
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.28 E-value=0.68 Score=44.28 Aligned_cols=42 Identities=12% Similarity=-0.012 Sum_probs=34.1
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||-.|||+ |.+++.+|+.---.+|+++|.+++-+++|++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 4688889997 99999999853212699999999999999764
No 319
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.31 E-value=2.6 Score=37.77 Aligned_cols=59 Identities=15% Similarity=0.052 Sum_probs=41.8
Q ss_pred cccccCC-CccH---hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFC-GTAL---LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~C-GTG~---LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|+ |.|. ++..|++.|. +|+.+|.+.+.++...+... ..+..++.++++|+.++.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~~ 86 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLA----DLGLGRVEAVVCDVTSTE 86 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHH----TTCSSCEEEEECCTTCHH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHH----hcCCCceEEEEeCCCCHH
Confidence 3444454 5543 6777888985 69999999988876665431 223358999999999886
No 320
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=89.28 E-value=0.62 Score=46.67 Aligned_cols=44 Identities=9% Similarity=0.011 Sum_probs=36.4
Q ss_pred CCcccccCCCccHhHHHHHHhCCC-Ce----EEEEeCCHHHHHHHHHhc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSR-RT----AVGLDLDLEALEWCMENN 157 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~-~t----VvGVDLS~emL~~A~e~~ 157 (382)
+.+++|||||.|-++.-|.+.|.. -. |.++|+|+.+...-+.+.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~ 58 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIH 58 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHH
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHc
Confidence 467899999999999999999831 13 778999999998777765
No 321
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.25 E-value=2.9 Score=37.77 Aligned_cols=58 Identities=9% Similarity=-0.058 Sum_probs=43.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
++|=-|++.| .++..|+++|. +|++++.+.+-++.+.+... ..+..++.++..|+.++
T Consensus 14 ~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 14 CAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLK----NSNHENVVFHQLDVTDP 74 (311)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHH----TTTCCSEEEEECCTTSC
T ss_pred EEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHH----hcCCCceEEEEccCCCc
Confidence 4666677666 36778888885 79999999988876665532 22335799999999988
No 322
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.04 E-value=2.3 Score=38.45 Aligned_cols=58 Identities=7% Similarity=-0.141 Sum_probs=40.1
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLD------------LEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS------------~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+ .+.++.+.+.... .+.++.+++.|++++.
T Consensus 12 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 12 VVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEK-----TGRKAYTAEVDVRDRA 84 (287)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-----TTSCEEEEECCTTCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHh-----cCCceEEEEccCCCHH
Confidence 4555566655 36778889995 69999998 6666555443211 1247899999999887
No 323
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=88.52 E-value=2.7 Score=38.10 Aligned_cols=55 Identities=15% Similarity=-0.041 Sum_probs=42.1
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.. + .++.+++.|+.++.
T Consensus 32 ~vlVTGas~GIG~aia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~----~----~~~~~~~~Dl~~~~ 89 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLHADGL--GVVIADLAAEKGKALADEL----G----NRAEFVSTNVTSED 89 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----C----TTEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHh----C----CceEEEEcCCCCHH
Confidence 4555677666 36778889995 6999999999887666553 1 37899999999876
No 324
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=88.39 E-value=2.8 Score=37.37 Aligned_cols=54 Identities=7% Similarity=-0.014 Sum_probs=39.4
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. + .++.++++|+.++.
T Consensus 6 vlVTGas~GIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~ 62 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVERGH--QVSMMGRRYQRLQQQELLL----G----NAVIGIVADLAHHE 62 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----G----GGEEEEECCTTSHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHh----c----CCceEEECCCCCHH
Confidence 444455554 36678888885 6999999999887655542 1 25889999999876
No 325
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.98 E-value=3.1 Score=39.42 Aligned_cols=42 Identities=17% Similarity=0.071 Sum_probs=33.4
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|+|+ |.+++.+|+.---.+|+++|.|++-+++|++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 3566678876 99999999864322499999999999999875
No 326
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.69 E-value=1.5 Score=37.73 Aligned_cols=39 Identities=5% Similarity=-0.120 Sum_probs=30.6
Q ss_pred CcccccCC--CccHhHHHHHH-hCCCCeEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDFC--GTALLSTEWLR-SDSRRTAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar-~g~~~tVvGVDLS~emL~~A~e 155 (382)
.+||-.|+ |.|..++.+++ .| ++|+++|.+++.++.+++
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHT
T ss_pred CEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH
Confidence 56888884 66888888776 45 479999999999987754
No 327
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=87.41 E-value=0.43 Score=53.20 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=46.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCc
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQP 179 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~ 179 (382)
+..++|||||.|-++.-|.+.|....|.++|+++.+.+.-+.|+. ...++.+|+.++
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l 596 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNIL 596 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHH
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHH
Confidence 467899999999999999999962268899999999988777752 345788887654
No 328
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.32 E-value=2.8 Score=38.73 Aligned_cols=58 Identities=10% Similarity=0.046 Sum_probs=38.4
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHH-HHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEA-LEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~em-L~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+- ++...+. .. ..+.++.++++|+.++.
T Consensus 49 ~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-~~----~~~~~~~~~~~Dv~d~~ 110 (291)
T 3ijr_A 49 NVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQY-VE----KEGVKCVLLPGDLSDEQ 110 (291)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHH-HH----TTTCCEEEEESCTTSHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHH-HH----hcCCcEEEEECCCCCHH
Confidence 4555676665 36778888985 69999998763 3322222 11 12347899999999876
No 329
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=87.15 E-value=1.6 Score=42.52 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=26.3
Q ss_pred CCccEEEEccchhcccCChhHH--HHHHHHHHhhccCCCcEEEE
Q 045407 234 PARDIICAFNYSCCCLHKRADL--VLYFKHVLHALSKKGGIFVM 275 (382)
Q Consensus 234 ~~fDiV~afn~S~~yL~~r~dL--~~yFr~V~~~L~~pGGiFVf 275 (382)
..+|+|.- |.|.-=.+ .+| ...|+.++++|+ |||+|+-
T Consensus 185 ~~~Da~fl--DgFsP~kN-PeLWs~e~f~~l~~~~~-pgg~laT 224 (308)
T 3vyw_A 185 FKADAVFH--DAFSPYKN-PELWTLDFLSLIKERID-EKGYWVS 224 (308)
T ss_dssp CCEEEEEE--CCSCTTTS-GGGGSHHHHHHHHTTEE-EEEEEEE
T ss_pred cceeEEEe--CCCCcccC-cccCCHHHHHHHHHHhC-CCcEEEE
Confidence 35788754 44443222 233 679999999999 9999985
No 330
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=87.11 E-value=3.1 Score=37.36 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=41.1
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|..++|++++.+++.++...+.. ..++.++++|++++.
T Consensus 5 ~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~ 63 (254)
T 3kzv_A 5 ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--------GDRFFYVVGDITEDS 63 (254)
T ss_dssp EEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--------GGGEEEEESCTTSHH
T ss_pred EEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--------CCceEEEECCCCCHH
Confidence 344455554 25667888886678999999999887666542 137899999999886
No 331
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.95 E-value=2.4 Score=38.42 Aligned_cols=58 Identities=14% Similarity=0.001 Sum_probs=42.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.... .+.++.++++|++++.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~ 73 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTD-----TGRRALSVGTDITDDA 73 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHH
Confidence 4555666665 36778889995 699999999988766554321 1247899999999887
No 332
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=86.84 E-value=2.3 Score=38.45 Aligned_cols=55 Identities=4% Similarity=-0.081 Sum_probs=41.6
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.|. ++..|++.|. +|+.+|.+++.++...+.. +.++.++++|+.++.
T Consensus 10 ~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~ 67 (255)
T 4eso_A 10 KAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF--------GPRVHALRSDIADLN 67 (255)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH--------GGGEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh--------CCcceEEEccCCCHH
Confidence 45556766653 6778889995 7999999999887665542 137899999999887
No 333
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=86.27 E-value=0.16 Score=61.34 Aligned_cols=39 Identities=18% Similarity=0.330 Sum_probs=13.5
Q ss_pred CCCccEEEEccchhcccCChhHHHHHHHHHHhhccCCCcEEEEe
Q 045407 233 LPARDIICAFNYSCCCLHKRADLVLYFKHVLHALSKKGGIFVMD 276 (382)
Q Consensus 233 ~~~fDiV~afn~S~~yL~~r~dL~~yFr~V~~~L~~pGGiFVfD 276 (382)
...||+|++.| -||.-.++..++++++..|+ |||.+|+.
T Consensus 1309 ~~~ydlvia~~----vl~~t~~~~~~l~~~~~lL~-p~G~l~~~ 1347 (2512)
T 2vz8_A 1309 LGKADLLVCNC----ALATLGDPAVAVGNMAATLK-EGGFLLLH 1347 (2512)
T ss_dssp ---CCEEEEEC----C---------------------CCEEEEE
T ss_pred CCceeEEEEcc----cccccccHHHHHHHHHHhcC-CCcEEEEE
Confidence 34699999886 56666788999999999999 99998884
No 334
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.21 E-value=3.6 Score=36.91 Aligned_cols=48 Identities=4% Similarity=-0.079 Sum_probs=34.1
Q ss_pred hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 127 LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 127 LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++..|++.|. +|+.++.+....+.+.+.. ... +..++.++++|++++.
T Consensus 25 ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-~~~---~~~~~~~~~~D~~~~~ 72 (266)
T 3oig_A 25 IARSLHEAGA--RLIFTYAGERLEKSVHELA-GTL---DRNDSIILPCDVTNDA 72 (266)
T ss_dssp HHHHHHHTTC--EEEEEESSGGGHHHHHHHH-HTS---SSCCCEEEECCCSSSH
T ss_pred HHHHHHHCCC--EEEEecCchHHHHHHHHHH-Hhc---CCCCceEEeCCCCCHH
Confidence 7788899995 6999999976555444332 111 2237899999999887
No 335
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.06 E-value=6 Score=32.43 Aligned_cols=52 Identities=21% Similarity=0.151 Sum_probs=35.6
Q ss_pred cccccCCCc-c-HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGT-A-LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGT-G-~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=+|||. | .++..|.+.|. .|+++|.+++.++.+++. .+..+.||..++.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRER-----------GVRAVLGNAANEE 62 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHH
Confidence 455556653 2 23344455674 699999999999877653 2567899988776
No 336
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.56 E-value=2.7 Score=34.08 Aligned_cols=52 Identities=10% Similarity=-0.012 Sum_probs=36.2
Q ss_pred cccccCCCc--cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGT--ALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGT--G~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=.|||. ..++..|++.|. .|+++|.+++.++.+.+. .+.++.+|..++.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~ 61 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLEDE-----------GFDAVIADPTDES 61 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHH
Confidence 455566654 224445566675 699999999988876653 2467899988876
No 337
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.42 E-value=3 Score=37.66 Aligned_cols=61 Identities=11% Similarity=0.000 Sum_probs=40.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... ... ...++.++.+|+.++.
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~D~~~~~ 71 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILA-AGV-SEQNVNSVVADVTTDA 71 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-TTC-CGGGEEEEECCTTSHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh-ccc-CCCceeEEecccCCHH
Confidence 3444565544 35667888885 799999999888765443210 011 1247899999999876
No 338
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.38 E-value=3.2 Score=37.75 Aligned_cols=61 Identities=10% Similarity=-0.025 Sum_probs=40.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+. ...++.++.+|+.++.
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dv~~~~ 71 (280)
T 1xkq_A 8 TVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILK-SGV-SEKQVNSVVADVTTED 71 (280)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHT-TTC-CGGGEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHH-cCC-CCcceEEEEecCCCHH
Confidence 3555566555 46677888885 799999999888765443211 000 0127899999999876
No 339
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.11 E-value=2.4 Score=40.10 Aligned_cols=42 Identities=10% Similarity=-0.062 Sum_probs=33.6
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.---.+|+++|.+++-++++++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 4566778887 99999999864322799999999999999875
No 340
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=85.09 E-value=3.7 Score=36.08 Aligned_cols=49 Identities=18% Similarity=0.216 Sum_probs=34.5
Q ss_pred HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 126 LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 126 ~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.++..|++.|. +|+.+|.+++-++...+.... ....++.++++|+.++.
T Consensus 17 ~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~ 65 (250)
T 2cfc_A 17 AIATRFLARGD--RVAALDLSAETLEETARTHWH----AYADKVLRVRADVADEG 65 (250)
T ss_dssp HHHHHHHHTTC--EEEEEESCHHHHHHHHHHHST----TTGGGEEEEECCTTCHH
T ss_pred HHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHH----hcCCcEEEEEecCCCHH
Confidence 35566778884 799999999887765443211 11247899999999876
No 341
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=85.08 E-value=3.3 Score=37.09 Aligned_cols=53 Identities=19% Similarity=0.307 Sum_probs=36.9
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|.+.| .++..|++.|. +|+.+|.+++.++...+.. .++.++++|+.++.
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~---------~~~~~~~~Dv~~~~ 60 (247)
T 3dii_A 5 VIVTGGGHGIGKQICLDFLEAGD--KVCFIDIDEKRSADFAKER---------PNLFYFHGDVADPL 60 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHTTC---------TTEEEEECCTTSHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhc---------ccCCeEEeeCCCHH
Confidence 333454444 36677888885 7999999998776544331 25678999999876
No 342
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=85.03 E-value=6.7 Score=35.39 Aligned_cols=58 Identities=9% Similarity=-0.107 Sum_probs=39.1
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEE-eCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGL-DLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGV-DLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.|. ++..|++.|. +|+.+ +.+.+.++...+.... ...++.++++|++++.
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~ 89 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGW--RVGVNYAANREAADAVVAAITE-----SGGEAVAIPGDVGNAA 89 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHH-----TTCEEEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCChhHHHHHHHHHHh-----cCCcEEEEEcCCCCHH
Confidence 46666766553 6677888885 58776 7787777654443211 1247999999999876
No 343
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.60 E-value=2.7 Score=39.60 Aligned_cols=42 Identities=21% Similarity=0.143 Sum_probs=33.8
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..|+=.|+|+ |.+++.+|+.-...+|+++|.+++-+++|++.
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 3566678876 99999999863235899999999999999764
No 344
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.32 E-value=7.4 Score=34.97 Aligned_cols=58 Identities=7% Similarity=-0.102 Sum_probs=42.3
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+.++.++++|+.++.
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~ 91 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVA-----AGGEAESHACDLSHSD 91 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHH-----hCCceeEEEecCCCHH
Confidence 4566676655 45677888885 699999999988776655321 1247899999999887
No 345
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=84.19 E-value=4 Score=36.76 Aligned_cols=60 Identities=12% Similarity=0.001 Sum_probs=40.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+..... ....++.++++|+.++.
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~ 77 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLET---APDAEVLTTVADVSDEA 77 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH---CTTCCEEEEECCTTSHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh---cCCceEEEEEccCCCHH
Confidence 4555666655 46677888885 7999999998877554432110 01246889999999876
No 346
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.14 E-value=5.5 Score=36.88 Aligned_cols=61 Identities=10% Similarity=0.040 Sum_probs=40.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+. ...++.++.+|+.++.
T Consensus 28 ~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~-~~~-~~~~~~~~~~Dv~d~~ 91 (297)
T 1xhl_A 28 SVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILK-AGV-PAEKINAVVADVTEAS 91 (297)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-TTC-CGGGEEEEECCTTSHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh-cCC-CCceEEEEecCCCCHH
Confidence 3555566555 45677888885 699999999887755443211 110 0127889999999876
No 347
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=84.07 E-value=6.9 Score=35.92 Aligned_cols=55 Identities=9% Similarity=-0.022 Sum_probs=41.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.. ..++.++++|++++.
T Consensus 31 ~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~ 88 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI--------GCGAAACRVDVSDEQ 88 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH--------CSSCEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc--------CCcceEEEecCCCHH
Confidence 4555677666 36788899995 7999999998887665542 136889999999886
No 348
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=83.93 E-value=6.1 Score=35.30 Aligned_cols=54 Identities=11% Similarity=-0.036 Sum_probs=37.9
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. + .++.++++|+.++.
T Consensus 9 vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~ 65 (253)
T 1hxh_A 9 ALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAEL----G----ERSMFVRHDVSSEA 65 (253)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHH----C----TTEEEECCCTTCHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc----C----CceEEEEccCCCHH
Confidence 444555444 35667788885 6999999998876544432 1 36889999998876
No 349
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=83.90 E-value=4.4 Score=38.02 Aligned_cols=41 Identities=12% Similarity=0.104 Sum_probs=34.0
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|||+ |.+++.+|+.-- ++|+++|.+++-++++++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHc
Confidence 4566688886 999999998643 5899999999999998764
No 350
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=83.71 E-value=3.6 Score=39.01 Aligned_cols=42 Identities=14% Similarity=0.013 Sum_probs=33.7
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||-.|||+ |.+++.+|+.---.+|+++|.|++-++++++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 4677789986 99999999853212799999999999998764
No 351
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=83.61 E-value=5.3 Score=36.29 Aligned_cols=49 Identities=6% Similarity=-0.170 Sum_probs=37.2
Q ss_pred HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 126 LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 126 ~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.++..|++.|. +|+.+|.+++.++-+.+... .+ +..++.+++.||.++.
T Consensus 23 aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~-~~---~~~~~~~~~~Dv~~~~ 71 (256)
T 4fs3_A 23 GVAKVLDQLGA--KLVFTYRKERSRKELEKLLE-QL---NQPEAHLYQIDVQSDE 71 (256)
T ss_dssp HHHHHHHHTTC--EEEEEESSGGGHHHHHHHHG-GG---TCSSCEEEECCTTCHH
T ss_pred HHHHHHHHCCC--EEEEEECCHHHHHHHHHHHH-hc---CCCcEEEEEccCCCHH
Confidence 37788999995 79999999988876655432 12 2347889999999887
No 352
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=83.45 E-value=1.4 Score=45.95 Aligned_cols=44 Identities=18% Similarity=0.106 Sum_probs=31.0
Q ss_pred CCCCcccccCCCccHhHHHHHHhC------------CCCeEEEEeC---CHHHHHHHHH
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRSD------------SRRTAVGLDL---DLEALEWCME 155 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~g------------~~~tVvGVDL---S~emL~~A~e 155 (382)
+.+.+|+|+|.|||.......+.- .+.+++.+.. +.+-|..|..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~ 115 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHA 115 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHT
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHH
Confidence 346789999999999877655431 1246899998 6666665443
No 353
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.39 E-value=4 Score=38.54 Aligned_cols=41 Identities=10% Similarity=-0.039 Sum_probs=32.7
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCC-eEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRR-TAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~-tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.-- + +|+++|.+++-++++++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~~ 211 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAKKV 211 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 4577788875 889999988532 4 799999999999988764
No 354
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=83.39 E-value=3.2 Score=38.78 Aligned_cols=40 Identities=8% Similarity=0.004 Sum_probs=31.8
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e 155 (382)
.++|-.|| |.|..++.+++.-- ++|+++|.+++.++.+++
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH
T ss_pred CEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHh
Confidence 56888888 77888888887432 489999999999998843
No 355
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.32 E-value=7.7 Score=34.77 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=40.9
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. + .++.++++|++++.
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~ 67 (259)
T 4e6p_A 10 SALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI----G----PAAYAVQMDVTRQD 67 (259)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----C----TTEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----C----CCceEEEeeCCCHH
Confidence 4555676655 46778889995 6999999998887655542 1 36789999999887
No 356
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=83.30 E-value=3.2 Score=37.80 Aligned_cols=59 Identities=10% Similarity=0.067 Sum_probs=39.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|+++|. +|+++|.+++.++...+.... . +..++.++.+|+.++.
T Consensus 30 ~vlITGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~~~Dl~d~~ 91 (286)
T 1xu9_A 30 KVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLE-L---GAASAHYIAGTMEDMT 91 (286)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-H---TCSEEEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHH-h---CCCceEEEeCCCCCHH
Confidence 3555666544 35566788885 799999999888755443211 1 2237889999998876
No 357
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=82.95 E-value=5.8 Score=35.59 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=40.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|++.| .++..|++.|. +|+.+|.+++.++.+.+...... ...++.++++|+.++.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~ 71 (267)
T 2gdz_A 9 VALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQF---EPQKTLFIQCDVADQQ 71 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTS---CGGGEEEEECCTTSHH
T ss_pred EEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhc---CCCceEEEecCCCCHH
Confidence 3555566554 36677888885 79999999987765544321110 1247889999998876
No 358
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=82.88 E-value=8.5 Score=35.00 Aligned_cols=54 Identities=7% Similarity=-0.064 Sum_probs=36.0
Q ss_pred cccccCCC----cc-HhHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCG----TA-LLSTEWLRSDSRRTAVGLDLDL--EALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CG----TG-~LS~elar~g~~~tVvGVDLS~--emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|.+ -| .++..|++.|. +|+.+|.+. +.++...+.. .++.++++|++++.
T Consensus 28 ~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~---------~~~~~~~~Dl~~~~ 88 (280)
T 3nrc_A 28 KILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEF---------NPAAVLPCDVISDQ 88 (280)
T ss_dssp EEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGG---------CCSEEEECCTTCHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhc---------CCceEEEeecCCHH
Confidence 45555532 33 37788899995 699999998 4443332221 25789999999876
No 359
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=82.82 E-value=2.3 Score=40.06 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=33.5
Q ss_pred CcccccCCCc-cHhHHHHHHhCC-CCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDS-RRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~-~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.-. .++|+++|.|++-++++++.
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh
Confidence 4677888876 899999998631 25799999999999998764
No 360
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=82.66 E-value=5.8 Score=36.73 Aligned_cols=58 Identities=17% Similarity=-0.031 Sum_probs=43.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|+++|. +|+.+|.+++.++...+.... .+.++.+++.|+.++.
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~ 93 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRG-----QGFDAHGVVCDVRHLD 93 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh-----cCCceEEEEccCCCHH
Confidence 4566677766 47788888995 699999999988776554321 1247899999999876
No 361
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=82.57 E-value=8.1 Score=33.66 Aligned_cols=53 Identities=8% Similarity=-0.131 Sum_probs=36.5
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=.|++.| .++..|+++|+ +|+.++.+++.++...+.. .++.++++|+.++.
T Consensus 8 vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~---------~~~~~~~~D~~~~~ 63 (234)
T 2ehd_A 8 VLITGASRGIGEATARLLHAKGY--RVGLMARDEKRLQALAAEL---------EGALPLPGDVREEG 63 (234)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHS---------TTCEEEECCTTCHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHh---------hhceEEEecCCCHH
Confidence 444454443 35566777885 7999999998776544432 15788999998876
No 362
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=82.57 E-value=6.3 Score=36.88 Aligned_cols=58 Identities=14% Similarity=-0.031 Sum_probs=40.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLD------------LEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS------------~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+ .+.|+...+... . .+.++.+++.|+.++.
T Consensus 48 ~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 48 VAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVE----E-QGRRIIARQADVRDLA 120 (317)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHH----H-TTCCEEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHH----h-cCCeEEEEECCCCCHH
Confidence 4666677766 47788899995 69999987 666654443321 1 1247899999999887
No 363
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=82.54 E-value=4.2 Score=35.62 Aligned_cols=57 Identities=9% Similarity=-0.042 Sum_probs=39.6
Q ss_pred cccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 118 QEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 118 LEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
|=-|++.| .++..|++.|. +|+.++.+.+-++...+..... .+.++.++++|++++.
T Consensus 6 lITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~ 65 (235)
T 3l77_A 6 VITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQE----QGVEVFYHHLDVSKAE 65 (235)
T ss_dssp EEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH----HCCCEEEEECCTTCHH
T ss_pred EEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh----cCCeEEEEEeccCCHH
Confidence 33454444 36778888885 6999999998887665543211 1247899999999887
No 364
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=82.52 E-value=4.8 Score=38.35 Aligned_cols=42 Identities=14% Similarity=0.029 Sum_probs=32.9
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.---.+|+++|.|++-+++|++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 236 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF 236 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence 4577778876 89999999864212799999999999998753
No 365
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=82.00 E-value=2.3 Score=40.13 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=32.5
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e 155 (382)
.++|-.|+ |.|.+++.+++.-- ++|+++|.+++.++.+++
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHH
Confidence 56888998 67888888887432 589999999999988875
No 366
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=81.79 E-value=9.7 Score=34.41 Aligned_cols=58 Identities=12% Similarity=-0.078 Sum_probs=38.4
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeC-CHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDL-DLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDL-S~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.|. ++..|++.|. +|+.++. +.+.++...+... . .+.++.+++.|++++.
T Consensus 20 ~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~~~~ 81 (270)
T 3is3_A 20 VALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIK----A-LGSDAIAIKADIRQVP 81 (270)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHH----H-TTCCEEEEECCTTSHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHH----h-cCCcEEEEEcCCCCHH
Confidence 46666777664 6778889995 6998876 4555544333221 1 1247899999999886
No 367
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.75 E-value=13 Score=31.34 Aligned_cols=47 Identities=15% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCCccHhHHHH----HHh-CCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 121 FCGTALLSTEW----LRS-DSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 121 ~CGTG~LS~el----ar~-g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
-||.|.++..+ .+. |. +|+++|.+++.++.+++. .+..+.+|..++.
T Consensus 44 IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~ 95 (183)
T 3c85_A 44 ILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRSE-----------GRNVISGDATDPD 95 (183)
T ss_dssp EECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHH
T ss_pred EECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHH
Confidence 34555555443 445 64 699999999988776643 1346788876654
No 368
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=81.70 E-value=3.3 Score=39.48 Aligned_cols=41 Identities=12% Similarity=0.057 Sum_probs=33.7
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|||+ |.+++.+|+.- .++|+++|.+++-+++|++.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc
Confidence 4677778876 89999999864 36899999999999998764
No 369
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=81.69 E-value=4.4 Score=37.92 Aligned_cols=41 Identities=10% Similarity=-0.030 Sum_probs=33.2
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||-.|| |.|.+++.+++.-- ++|+++|.+++-++++++.
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~ 199 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTK 199 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH
Confidence 56888887 68899999888532 5899999999999988754
No 370
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=81.66 E-value=2.7 Score=38.00 Aligned_cols=58 Identities=5% Similarity=-0.075 Sum_probs=39.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEE-eCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGL-DLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGV-DLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+ +.+.+.++...+... . .+.++.++++|++++.
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~~~~ 71 (259)
T 3edm_A 10 TIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIE----K-LGRSALAIKADLTNAA 71 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHH----T-TTSCCEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHH----h-cCCceEEEEcCCCCHH
Confidence 4555677665 36778889995 68888 777776665544321 1 1247889999999887
No 371
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=81.53 E-value=5.7 Score=36.34 Aligned_cols=55 Identities=13% Similarity=-0.044 Sum_probs=41.3
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.. ..++.+++.|+.++.
T Consensus 7 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~ 64 (281)
T 3zv4_A 7 VALITGGASGLGRALVDRFVAEGA--RVAVLDKSAERLRELEVAH--------GGNAVGVVGDVRSLQ 64 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT--------BTTEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHc--------CCcEEEEEcCCCCHH
Confidence 3555566665 47788899995 7999999999887655442 137889999999876
No 372
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=81.47 E-value=3.7 Score=37.74 Aligned_cols=59 Identities=10% Similarity=-0.109 Sum_probs=41.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+...+.++++|+.++.
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~d~~ 96 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGY--SVVITGRRPDVLDAAAGEIGG----RTGNIVRAVVCDVGDPD 96 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----HHSSCEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh----cCCCeEEEEEcCCCCHH
Confidence 4555676655 36777888885 699999999888765554321 11234689999999887
No 373
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=81.33 E-value=10 Score=34.34 Aligned_cols=59 Identities=14% Similarity=0.018 Sum_probs=39.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|++.| .++..|++.|. +|+++|.+++.++...+..... ...++.++++|++++.
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~ 89 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQ----TGNKVHAIQCDVRDPD 89 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH----HSSCEEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh----cCCceEEEEeCCCCHH
Confidence 3444565444 35667788885 7999999998876554432110 0137899999999876
No 374
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=81.22 E-value=9.2 Score=34.77 Aligned_cols=57 Identities=9% Similarity=-0.083 Sum_probs=33.5
Q ss_pred cccccCCC----ccH-hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCG----TAL-LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CG----TG~-LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++ -|+ ++..|++.|. +|+.+|.+++ ++...+...... .++.++++|+.++.
T Consensus 23 ~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~Dl~~~~ 84 (285)
T 2p91_A 23 RALITGVANERSIAYGIAKSFHREGA--QLAFTYATPK-LEKRVREIAKGF-----GSDLVVKCDVSLDE 84 (285)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEESSGG-GHHHHHHHHHHT-----TCCCEEECCTTCHH
T ss_pred EEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCHH-HHHHHHHHHHhc-----CCeEEEEcCCCCHH
Confidence 35555653 333 5567788884 7999999985 221111111111 13678999999876
No 375
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=80.93 E-value=13 Score=32.62 Aligned_cols=56 Identities=9% Similarity=0.039 Sum_probs=38.1
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|++++.+++.++...+.. ... .++.++++|+.++.
T Consensus 9 vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~~~--~~~~~~~~D~~~~~ 67 (251)
T 1zk4_A 9 AIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSV----GTP--DQIQFFQHDSSDED 67 (251)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----CCT--TTEEEEECCTTCHH
T ss_pred EEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----hcc--CceEEEECCCCCHH
Confidence 444555444 35566777885 6999999998776554432 111 37899999998876
No 376
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=80.70 E-value=6.1 Score=37.88 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=33.3
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|+|+ |.+++.+|+.---.+|+++|.+++-+++|++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 3566678876 99999999854323899999999999998875
No 377
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=80.66 E-value=6.7 Score=35.15 Aligned_cols=54 Identities=9% Similarity=-0.175 Sum_probs=37.9
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. +.++.+++.|+.++.
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~ 64 (254)
T 1hdc_A 8 VIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATAREL--------GDAARYQHLDVTIEE 64 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT--------GGGEEEEECCTTCHH
T ss_pred EEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh--------CCceeEEEecCCCHH
Confidence 444555444 35667888885 7999999998876544431 136889999998876
No 378
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=80.64 E-value=1.6 Score=41.22 Aligned_cols=41 Identities=2% Similarity=-0.078 Sum_probs=33.7
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.-- ++|+++|.|++-++++++.
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l 219 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM 219 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc
Confidence 4566688887 999999998643 5899999999999998764
No 379
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=80.57 E-value=6.1 Score=37.67 Aligned_cols=42 Identities=10% Similarity=-0.062 Sum_probs=32.9
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|||+ |.+++.+|+.---.+|+++|.|++-+++|++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 239 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence 4577778875 89999999864212799999999999988753
No 380
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=80.53 E-value=9.6 Score=34.58 Aligned_cols=61 Identities=8% Similarity=0.018 Sum_probs=42.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|.+.| .++..|++.|. +|+.+|.+++.++...+.... .+. ...++.++++|++++.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~-~~~-~~~~~~~~~~Dv~~~~ 76 (281)
T 3svt_A 13 TYLVTGGGSGIGKGVAAGLVAAGA--SVMIVGRNPDKLAGAVQELEA-LGA-NGGAIRYEPTDITNED 76 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHT-TCC-SSCEEEEEECCTTSHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHH-hCC-CCceEEEEeCCCCCHH
Confidence 3555566555 36778888995 699999999988766554321 111 1237999999999886
No 381
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=80.43 E-value=6.6 Score=35.89 Aligned_cols=57 Identities=9% Similarity=-0.095 Sum_probs=39.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.++=-|++.| .++..|++.|. +|+.+|.+++.++...+.. ... . ++.++.+|+.++.
T Consensus 31 ~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l----~~~-~-~~~~~~~Dv~d~~ 90 (276)
T 2b4q_A 31 IALVTGGSRGIGQMIAQGLLEAGA--RVFICARDAEACADTATRL----SAY-G-DCQAIPADLSSEA 90 (276)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHH----TTS-S-CEEECCCCTTSHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHH----Hhc-C-ceEEEEeeCCCHH
Confidence 3555666555 45667888885 7999999998876544432 111 2 6888999998876
No 382
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=80.42 E-value=10 Score=34.57 Aligned_cols=58 Identities=5% Similarity=-0.215 Sum_probs=41.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.... .+.++.+++.|+.++.
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~ 66 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRD-----AGGTALAQVLDVTDRH 66 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHH-----TTCEEEEEECCTTCHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHH
Confidence 3455566655 36778888995 699999999988766554321 1247889999999876
No 383
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=80.39 E-value=2.9 Score=39.49 Aligned_cols=42 Identities=21% Similarity=0.182 Sum_probs=32.8
Q ss_pred CcccccCCC--ccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCG--TALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CG--TG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||-.|+| .|.+++.+++.-+.++|+++|.+++.++++++.
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~ 215 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA 215 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence 467888887 778888888763125799999999999988653
No 384
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.34 E-value=6.9 Score=38.89 Aligned_cols=50 Identities=18% Similarity=0.090 Sum_probs=34.6
Q ss_pred cccccCCCccHhHHH----HHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTALLSTE----WLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~LS~e----lar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
||+=+|| |+++.. |.+.|. .|++||.|++.++.+++. .+.++.||..++.
T Consensus 6 ~viIiG~--Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~ 59 (413)
T 3l9w_A 6 RVIIAGF--GRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMD 59 (413)
T ss_dssp SEEEECC--SHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHH
T ss_pred eEEEECC--CHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHH
Confidence 3444444 555444 344564 699999999999887754 2457899998876
No 385
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.33 E-value=3.6 Score=41.45 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=38.1
Q ss_pred CCccHhHHHHHHhC--CCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 122 CGTALLSTEWLRSD--SRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 122 CGTG~LS~elar~g--~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
||-|+.+..+|+.- ..+.|+.||-|++.++...++. .+..++||.+++.
T Consensus 9 ~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~ 59 (461)
T 4g65_A 9 LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPD 59 (461)
T ss_dssp ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHH
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHH
Confidence 77778777777642 2357999999999998777663 4678999999887
No 386
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=80.33 E-value=10 Score=34.17 Aligned_cols=55 Identities=13% Similarity=-0.089 Sum_probs=38.3
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. . .++.++++|+.++.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~ 66 (260)
T 1nff_A 9 VALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAEL----A----DAARYVHLDVTQPA 66 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT----G----GGEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----h----cCceEEEecCCCHH
Confidence 3455565554 35667788885 7999999998876554432 1 25788999998876
No 387
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=80.32 E-value=5 Score=37.06 Aligned_cols=58 Identities=9% Similarity=-0.041 Sum_probs=37.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDL--EALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~--emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+. +.++...+.. .. .+.++.++++|+.++.
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~Dv~d~~ 113 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALI-EE----CGRKAVLLPGDLSDES 113 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHH-HH----TTCCEEECCCCTTSHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHH-HH----cCCcEEEEEecCCCHH
Confidence 4556676655 36778889995 699999873 3343333221 11 1247889999999876
No 388
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=80.29 E-value=6.8 Score=37.30 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=32.9
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.---.+|+++|.+++-+++|++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 235 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV 235 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence 4577778876 89999999854212799999999999998753
No 389
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=80.20 E-value=3.9 Score=39.12 Aligned_cols=42 Identities=19% Similarity=0.164 Sum_probs=32.8
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|||+ |.+++.+|+.---.+|+++|.+++-+++|++-
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 4566678875 99999999864322799999999999988753
No 390
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.95 E-value=6.9 Score=37.26 Aligned_cols=42 Identities=7% Similarity=-0.026 Sum_probs=32.8
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|||+ |.+++.+|+.---.+|+++|.|++-+++|++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 235 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL 235 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 4577788876 89999999853212799999999999998753
No 391
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=79.95 E-value=9.6 Score=34.07 Aligned_cols=57 Identities=7% Similarity=-0.065 Sum_probs=39.0
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... . +.++.++++|+.++.
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~----~~~~~~~~~Dv~~~~ 67 (260)
T 2qq5_A 8 CVVTGASRGIGRGIALQLCKAGA--TVYITGRHLDTLRVVAQEAQS-L----GGQCVPVVCDSSQES 67 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-H----SSEEEEEECCTTSHH
T ss_pred EEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHH-c----CCceEEEECCCCCHH
Confidence 444555544 35667788885 799999999887755443211 1 237889999999876
No 392
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.84 E-value=9.5 Score=34.41 Aligned_cols=60 Identities=7% Similarity=-0.014 Sum_probs=38.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.| .++..|++.|. +|++++.+++.++...+.... .+ ...++.++.+|+.++.
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~--~~~~~~~~~~Dl~~~~ 96 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKS-AG--YPGTLIPYRCDLSNEE 96 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-TT--CSSEEEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHh-cC--CCceEEEEEecCCCHH
Confidence 3555565444 35566778885 799999998877654433211 11 1136889999999876
No 393
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=79.68 E-value=7.4 Score=36.96 Aligned_cols=42 Identities=12% Similarity=0.020 Sum_probs=32.8
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.---.+|+++|.|++-++++++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 4566778876 89999999853212799999999999998764
No 394
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=79.55 E-value=5.1 Score=37.40 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=32.9
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|| |.|.+++.+++.-- ++|+++|.+++-++++.+.
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ 193 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEE 193 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH
Confidence 46888888 67899999987532 5899999999999988443
No 395
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=79.46 E-value=6.1 Score=37.32 Aligned_cols=41 Identities=15% Similarity=-0.063 Sum_probs=33.0
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+|+ |.+++.+|+.- .++|+++|.|++-++++++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l 211 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC 211 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh
Confidence 4577788886 89999999853 24699999999999998753
No 396
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=79.46 E-value=6 Score=36.58 Aligned_cols=57 Identities=4% Similarity=-0.240 Sum_probs=37.9
Q ss_pred cccccCCCcc-----HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA-----LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG-----~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|.+.| .++..|++.|. +|+.++.++...+.+.+.. .. ..++.++++|+.++.
T Consensus 33 ~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~~Dv~d~~ 94 (293)
T 3grk_A 33 RGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLA-EE-----LGAFVAGHCDVADAA 94 (293)
T ss_dssp EEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHH-HH-----HTCEEEEECCTTCHH
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHH-Hh-----cCCceEEECCCCCHH
Confidence 3555565432 47788899995 6999999976555443322 11 125789999999886
No 397
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=79.43 E-value=7.2 Score=33.13 Aligned_cols=40 Identities=5% Similarity=0.083 Sum_probs=28.6
Q ss_pred hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 127 LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 127 LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++..|+++| ++|++++.+++.+.... .++.++++|++++.
T Consensus 16 l~~~L~~~g--~~V~~~~R~~~~~~~~~------------~~~~~~~~D~~d~~ 55 (221)
T 3ew7_A 16 ILEEAKNRG--HEVTAIVRNAGKITQTH------------KDINILQKDIFDLT 55 (221)
T ss_dssp HHHHHHHTT--CEEEEEESCSHHHHHHC------------SSSEEEECCGGGCC
T ss_pred HHHHHHhCC--CEEEEEEcCchhhhhcc------------CCCeEEeccccChh
Confidence 445566777 47999999987654211 25789999998776
No 398
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.41 E-value=10 Score=36.66 Aligned_cols=42 Identities=10% Similarity=-0.086 Sum_probs=32.8
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|+|+ |.+++.+|+.---.+|+++|.+++-+++|++-
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 3455567766 89999999864322899999999999999865
No 399
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=79.17 E-value=2 Score=42.50 Aligned_cols=63 Identities=8% Similarity=-0.035 Sum_probs=45.8
Q ss_pred CCcccccCCCccHhHHHHH-HhCCC-CeEEEEeCCHHHHHHHHHhccccccCCCC-cceEEEeccCC
Q 045407 114 PLHLQEDFCGTALLSTEWL-RSDSR-RTAVGLDLDLEALEWCMENNLNKVGADGY-SRISLFHGNVL 177 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~ela-r~g~~-~tVvGVDLS~emL~~A~e~~~~kl~~d~~-~RI~l~~gDV~ 177 (382)
...++|+||+.|..|..++ +.++. .+|++++-+|.+.+..+++... ....+. .+|.+++.-+.
T Consensus 227 ~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~-~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 227 SEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR-YTDTNFASRITVHGCGAG 292 (409)
T ss_dssp SCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH-TTTSTTGGGEEEECSEEC
T ss_pred CCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh-hhccCCCCCEEEEEeEEE
Confidence 3578999999999999988 55543 6899999999999998886421 000112 47777775543
No 400
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=79.01 E-value=5.4 Score=36.86 Aligned_cols=46 Identities=4% Similarity=-0.185 Sum_probs=32.4
Q ss_pred hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 127 LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 127 LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++..|++.|. +|+.+|.+.+.++...+.... . .++.++++|++++.
T Consensus 48 ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-~-----~~~~~~~~Dv~d~~ 93 (296)
T 3k31_A 48 IAKAVCAQGA--EVALTYLSETFKKRVDPLAES-L-----GVKLTVPCDVSDAE 93 (296)
T ss_dssp HHHHHHHTTC--EEEEEESSGGGHHHHHHHHHH-H-----TCCEEEECCTTCHH
T ss_pred HHHHHHHCCC--EEEEEeCChHHHHHHHHHHHh-c-----CCeEEEEcCCCCHH
Confidence 7888999995 699999997655444332111 1 24678999999886
No 401
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.92 E-value=2.4 Score=40.81 Aligned_cols=41 Identities=7% Similarity=-0.104 Sum_probs=33.5
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||-.|+|+ |.+++.+|+.- .++|+++|.|++-++++++.
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l 237 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL 237 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc
Confidence 4677788886 99999999853 25799999999999998863
No 402
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=78.92 E-value=12 Score=34.26 Aligned_cols=55 Identities=13% Similarity=0.012 Sum_probs=41.4
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. + .++.++++|++++.
T Consensus 29 ~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~d~~ 86 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAKNGA--YVVVADVNEDAAVRVANEI----G----SKAFGVRVDVSSAK 86 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH----C----TTEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----C----CceEEEEecCCCHH
Confidence 4556677666 36778889995 6999999998887655542 1 36889999999886
No 403
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=78.88 E-value=1.5 Score=50.25 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=46.1
Q ss_pred CCcccccCCCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 114 PLHLQEDFCGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 114 p~~LLEl~CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+..++|||||.|-++.-|.+.|....|.++|+++.+++.-+.|+. ...++++|+.++.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~ 908 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLL 908 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHH
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHh
Confidence 467899999999999999999962368899999999988777651 2457788876543
No 404
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=78.28 E-value=4.7 Score=35.45 Aligned_cols=47 Identities=6% Similarity=-0.094 Sum_probs=32.2
Q ss_pred hHHHHHH-hCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 127 LSTEWLR-SDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 127 LS~elar-~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++..|++ .|. +|+.++.+++.+....+.... .+.++.++.+|+.++.
T Consensus 20 ~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~~ 67 (276)
T 1wma_A 20 IVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQA-----EGLSPRFHQLDIDDLQ 67 (276)
T ss_dssp HHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHH-----TTCCCEEEECCTTCHH
T ss_pred HHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHh-----cCCeeEEEECCCCCHH
Confidence 3445566 674 799999998877655544211 1247889999998876
No 405
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=78.25 E-value=3.3 Score=39.65 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=31.3
Q ss_pred cccccC-C-CccHhHHHHHHh-CCCCeEEEEeCCHHHHHHHHHh
Q 045407 116 HLQEDF-C-GTALLSTEWLRS-DSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 116 ~LLEl~-C-GTG~LS~elar~-g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.||=.| + |.|.+++.+|+. +. .+|+++|.+++-++++++.
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g-~~Vi~~~~~~~~~~~~~~l 216 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTD-LTVIATASRPETQEWVKSL 216 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCC-SEEEEECSSHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHc
Confidence 455555 4 459999999996 43 5899999999999998763
No 406
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=78.20 E-value=6 Score=36.39 Aligned_cols=58 Identities=12% Similarity=0.000 Sum_probs=42.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+... . .+.++.++++|+.++.
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~~~~ 70 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGA--KVVVTARNGNALAELTDEIA----G-GGGEAAALAGDVGDEA 70 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHT----T-TTCCEEECCCCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHH----h-cCCcEEEEECCCCCHH
Confidence 4555666665 46778889995 69999999998876655431 1 2357899999999876
No 407
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=78.06 E-value=17 Score=32.33 Aligned_cols=59 Identities=10% Similarity=-0.068 Sum_probs=38.4
Q ss_pred ccccCCCcc---HhHHHHHH---hCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLR---SDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar---~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++ .|. +|+.+|.+++.++...+..... ....++.++++|+.++.
T Consensus 9 ~lVTGas~gIG~~ia~~l~~~~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~ 73 (259)
T 1oaa_A 9 CVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQ---QPDLKVVLAAADLGTEA 73 (259)
T ss_dssp EEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHH---CTTSEEEEEECCTTSHH
T ss_pred EEEeCCCChHHHHHHHHHHHhhcCCC--eEEEEeCCHHHHHHHHHHHHhh---CCCCeEEEEecCCCCHH
Confidence 444565554 35556666 674 7999999998887655442110 01247899999999876
No 408
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=78.04 E-value=6.9 Score=34.17 Aligned_cols=59 Identities=14% Similarity=-0.069 Sum_probs=37.4
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|++.| .++..|+++|. +|++++.+++.++...+...... ..++.++.+|+.++.
T Consensus 9 ~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~ 70 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASAGS--TVIITGTSGERAKAVAEEIANKY----GVKAHGVEMNLLSEE 70 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHH----CCCEEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhc----CCceEEEEccCCCHH
Confidence 3444555443 24556777884 79999999987765443311101 136889999998876
No 409
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=77.57 E-value=5.2 Score=37.63 Aligned_cols=41 Identities=5% Similarity=-0.081 Sum_probs=33.3
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||-.|+ |.|.+++.+++.-- ++|+++|.+++-++.+++.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~ 210 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL 210 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc
Confidence 46788888 78999999988532 5899999999999988753
No 410
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=77.40 E-value=13 Score=33.71 Aligned_cols=59 Identities=10% Similarity=-0.078 Sum_probs=39.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.++.+++.++...+...... +.++.++++|+.++.
T Consensus 23 ~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~ 84 (267)
T 1vl8_A 23 VALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY----GVETMAFRCDVSNYE 84 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc----CCeEEEEEcCCCCHH
Confidence 3555565554 35677788885 69999999987765443321111 136888999998876
No 411
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.35 E-value=24 Score=27.62 Aligned_cols=47 Identities=11% Similarity=0.108 Sum_probs=30.4
Q ss_pred CCccHhHHH----HHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 122 CGTALLSTE----WLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 122 CGTG~LS~e----lar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
||.|.++.. |++.| +.|+++|.+++.++...++. .+.++.+|..++.
T Consensus 10 iG~G~iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~ 60 (140)
T 1lss_A 10 AGIGRVGYTLAKSLSEKG--HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIK 60 (140)
T ss_dssp ECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHH
T ss_pred ECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHH
Confidence 355655544 44556 47999999998877555431 2456788876654
No 412
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=77.21 E-value=14 Score=34.00 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=39.4
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... . +.++.++++|+.++.
T Consensus 36 ~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~----~-~~~~~~~~~Dv~d~~ 96 (291)
T 3cxt_A 36 IALVTGASYGIGFAIASAYAKAGA--TIVFNDINQELVDRGMAAYKA----A-GINAHGYVCDVTDED 96 (291)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHH----T-TCCCEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh----c-CCeEEEEEecCCCHH
Confidence 4555566554 35667788885 799999999877654443211 1 236889999999876
No 413
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=77.20 E-value=6.5 Score=35.59 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=29.2
Q ss_pred HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 126 LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 126 ~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.++..|++.|. +|+.+|.+++ ++...+...... .++.++++|+.++.
T Consensus 23 ~~a~~l~~~G~--~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~D~~~~~ 69 (275)
T 2pd4_A 23 GIAQSCFNQGA--TLAFTYLNES-LEKRVRPIAQEL-----NSPYVYELDVSKEE 69 (275)
T ss_dssp HHHHHHHTTTC--EEEEEESSTT-THHHHHHHHHHT-----TCCCEEECCTTCHH
T ss_pred HHHHHHHHCCC--EEEEEeCCHH-HHHHHHHHHHhc-----CCcEEEEcCCCCHH
Confidence 35567778884 7999999986 222222111111 13678999999876
No 414
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=77.18 E-value=2.5 Score=43.89 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=32.0
Q ss_pred CCCCcccccCCCccHhHHHHHHh------------CCCCeEEEEeC---CHHHHHHHHH
Q 045407 112 RQPLHLQEDFCGTALLSTEWLRS------------DSRRTAVGLDL---DLEALEWCME 155 (382)
Q Consensus 112 r~p~~LLEl~CGTG~LS~elar~------------g~~~tVvGVDL---S~emL~~A~e 155 (382)
+...+|+|+|-|||......++. ..+-+.+++.. +.+.|..+..
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~ 123 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQ 123 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHT
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHH
Confidence 34568999999999976655443 22346899999 9988875554
No 415
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=76.96 E-value=24 Score=32.80 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=32.3
Q ss_pred CCcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 114 PLHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 114 p~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
...||=.|+|+ |.+++.+|+.-.-..++++|.+++-+++|++-
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred CCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 34566667764 77788888765434679999999999998874
No 416
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=76.89 E-value=12 Score=33.93 Aligned_cols=58 Identities=14% Similarity=-0.067 Sum_probs=36.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHH-HHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEA-LEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~em-L~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.++.+.+- ++...+.. .. .+.++.++.+|+.++.
T Consensus 31 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-~~----~~~~~~~~~~D~~~~~ 92 (283)
T 1g0o_A 31 VALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAI-KK----NGSDAACVKANVGVVE 92 (283)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHH-HH----TTCCEEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHH-HH----hCCCeEEEEcCCCCHH
Confidence 3555566555 35667788885 69999998643 33322221 11 1236889999998876
No 417
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=76.87 E-value=4.8 Score=36.23 Aligned_cols=58 Identities=7% Similarity=-0.067 Sum_probs=37.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. ... ..++.++++|+.++.
T Consensus 36 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~-~~~----~~~~~~~~~Dl~~~~ 96 (279)
T 3ctm_A 36 VASVTGSSGGIGWAVAEAYAQAGA--DVAIWYNSHPADEKAEHLQ-KTY----GVHSKAYKCNISDPK 96 (279)
T ss_dssp EEEETTTTSSHHHHHHHHHHHHTC--EEEEEESSSCCHHHHHHHH-HHH----CSCEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHH-Hhc----CCcceEEEeecCCHH
Confidence 3555565544 46667888885 6999999876554333221 111 136889999998876
No 418
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=76.61 E-value=6.5 Score=35.49 Aligned_cols=58 Identities=14% Similarity=-0.039 Sum_probs=40.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLD------------LEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS------------~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+ .+.++...+.... .+.++.++++|++++.
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 15 VAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVED-----IGSRIVARQADVRDRE 87 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-----HTCCEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHh-----cCCeEEEEeCCCCCHH
Confidence 4555676665 47788899995 69999987 6666654443211 1247999999999887
No 419
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=76.51 E-value=9.6 Score=34.17 Aligned_cols=43 Identities=7% Similarity=-0.068 Sum_probs=28.1
Q ss_pred hHHHHHHhCCCCeEEEEeCCH---HHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 127 LSTEWLRSDSRRTAVGLDLDL---EALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 127 LS~elar~g~~~tVvGVDLS~---emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++..|++.|. +|+.+|.++ +.++...+.. .++.++++|+.++.
T Consensus 27 ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~---------~~~~~~~~D~~~~~ 72 (265)
T 1qsg_A 27 IAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQL---------GSDIVLQCDVAEDA 72 (265)
T ss_dssp HHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHT---------TCCCEEECCTTCHH
T ss_pred HHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhc---------CCcEEEEccCCCHH
Confidence 5667788885 699999987 3333222211 12368899998876
No 420
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=76.44 E-value=7.7 Score=35.24 Aligned_cols=54 Identities=13% Similarity=-0.043 Sum_probs=38.3
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. .++.++++|+.++.
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~---------~~~~~~~~Dv~d~~ 67 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQEL---------PGAVFILCDVTQED 67 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHC---------TTEEEEECCTTSHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh---------cCCeEEEcCCCCHH
Confidence 3555566554 46677888885 7999999998876554432 13788999998876
No 421
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=76.42 E-value=11 Score=33.63 Aligned_cols=59 Identities=10% Similarity=-0.019 Sum_probs=40.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC--CCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV--LQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV--~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+..++.+++.|+ +++.
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~ 77 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINE----ETGRQPQWFILDLLTCTSE 77 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----HHSCCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh----hcCCCceEEEEecccCCHH
Confidence 4555566555 36677888885 699999999888765554221 1123678899999 6654
No 422
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=75.97 E-value=9 Score=33.96 Aligned_cols=58 Identities=12% Similarity=-0.058 Sum_probs=37.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeC-CHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDL-DLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDL-S~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|++++. +++.++...+... . .+.++.++.+|+.++.
T Consensus 23 ~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~----~-~~~~~~~~~~D~~~~~ 84 (274)
T 1ja9_A 23 VALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELK----K-LGAQGVAIQADISKPS 84 (274)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHH----H-TTCCEEEEECCTTSHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHH----h-cCCcEEEEEecCCCHH
Confidence 3554555433 35566777885 7999999 8777654433321 1 1236889999999876
No 423
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=75.86 E-value=5.7 Score=35.18 Aligned_cols=58 Identities=16% Similarity=0.027 Sum_probs=43.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.... ...++.++++|++++.
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~ 71 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVA-----DGGTAISVAVDVSDPE 71 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHH
Confidence 4555676665 47788888995 699999999988776655321 1247899999999886
No 424
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=75.84 E-value=8.9 Score=35.09 Aligned_cols=58 Identities=7% Similarity=-0.047 Sum_probs=40.5
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeC-CHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDL-DLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDL-S~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.|. ++..|++.|. +|+.+|. +++.++...+... . .+.++.++++|+.++.
T Consensus 31 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~d~~ 92 (280)
T 4da9_A 31 VAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELS----G-LGARVIFLRADLADLS 92 (280)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHH----H-TTCCEEEEECCTTSGG
T ss_pred EEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHH----h-cCCcEEEEEecCCCHH
Confidence 45566776663 6778889995 6999996 7776665444321 1 1247999999999887
No 425
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=75.77 E-value=5.1 Score=36.22 Aligned_cols=59 Identities=8% Similarity=0.038 Sum_probs=42.3
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|.+.| .++..|++.|. +|+.+|.+++.++.+.+... ..+..++.++++|+.++.
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dv~~~~ 73 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLD----QLGSGKVIGVQTDVSDRA 73 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHH----TTSSSCEEEEECCTTSHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHH----hhCCCcEEEEEcCCCCHH
Confidence 4555565555 36677888885 79999999998877665432 222247999999999887
No 426
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=75.70 E-value=4.5 Score=37.68 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=42.8
Q ss_pred ccccCCCccH---hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchh
Q 045407 117 LQEDFCGTAL---LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLE 181 (382)
Q Consensus 117 LLEl~CGTG~---LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~ 181 (382)
+|==|.+.|. ++..|++.|. +|+.+|.+++.|+-..+... +. +.++..+++||.++..
T Consensus 10 alVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~----~~-g~~~~~~~~Dvt~~~~ 70 (254)
T 4fn4_A 10 VIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELR----GM-GKEVLGVKADVSKKKD 70 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHH----HT-TCCEEEEECCTTSHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHH----hc-CCcEEEEEccCCCHHH
Confidence 4444666654 6788999995 69999999999887666532 11 2478999999999873
No 427
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=75.65 E-value=5.1 Score=37.66 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=33.3
Q ss_pred CcccccCCC--ccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCG--TALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CG--TG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.||| .|.+++.+|+.-- ++|+++|.+++-++++++.
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhC
Confidence 467788886 6899999988432 5899999999999998874
No 428
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=75.42 E-value=9.5 Score=35.97 Aligned_cols=41 Identities=7% Similarity=-0.151 Sum_probs=32.2
Q ss_pred CcccccCC--CccHhHHHHHHhCCCC-eEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRR-TAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~-tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|| |.|.+++.+++.-- + +|+++|.+++-++.+++.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~G-a~~Vi~~~~~~~~~~~~~~~ 205 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLG-CSRVVGICGTHEKCILLTSE 205 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHH
Confidence 46777887 67888888887532 4 899999999999888764
No 429
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=75.38 E-value=6 Score=35.54 Aligned_cols=58 Identities=12% Similarity=-0.097 Sum_probs=42.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++.+.+... . .+.++.++++|+.++.
T Consensus 8 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~~~~ 68 (257)
T 3imf_A 8 VVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIE----Q-FPGQILTVQMDVRNTD 68 (257)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC----C-STTCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHH----h-cCCcEEEEEccCCCHH
Confidence 3445565554 36777888885 69999999998887665531 1 2347899999999876
No 430
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=75.35 E-value=12 Score=33.65 Aligned_cols=57 Identities=12% Similarity=-0.112 Sum_probs=38.9
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEE-eCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGL-DLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGV-DLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|+.+ +.+.+.++...+... . .+.++.++++|++++.
T Consensus 7 vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~~~~ 67 (258)
T 3oid_A 7 ALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIE----K-LGVKVLVVKANVGQPA 67 (258)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHH----T-TTCCEEEEECCTTCHH
T ss_pred EEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHH----h-cCCcEEEEEcCCCCHH
Confidence 444555544 36677888885 68886 889887765554421 1 2247899999999887
No 431
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=75.10 E-value=5.5 Score=35.97 Aligned_cols=60 Identities=13% Similarity=-0.092 Sum_probs=42.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+..... .+..++.+++.|+.++.
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~ 72 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQR---FPGARLFASVCDVLDAL 72 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH---STTCCEEEEECCTTCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh---cCCceEEEEeCCCCCHH
Confidence 4555676665 46778888995 6999999999887665543211 12346899999999877
No 432
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=75.07 E-value=11 Score=34.07 Aligned_cols=55 Identities=13% Similarity=-0.070 Sum_probs=40.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.. + .++.+++.|++++.
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~~~~ 70 (271)
T 3tzq_B 13 VAIITGACGGIGLETSRVLARAGA--RVVLADLPETDLAGAAASV----G----RGAVHHVVDLTNEV 70 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHH----C----TTCEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh----C----CCeEEEECCCCCHH
Confidence 4555676665 46788899995 6999999998877655542 1 36788999999876
No 433
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=74.99 E-value=6.8 Score=37.11 Aligned_cols=41 Identities=12% Similarity=-0.093 Sum_probs=31.2
Q ss_pred CcccccCCCc-cHhH-HHHH-HhCCCCe-EEEEeCCHH---HHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLS-TEWL-RSDSRRT-AVGLDLDLE---ALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS-~ela-r~g~~~t-VvGVDLS~e---mL~~A~e~ 156 (382)
..||=.|+|+ |.++ +.+| +.- .++ |+++|.+++ -++++++.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l 221 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL 221 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc
Confidence 4677788765 8888 8999 542 244 999999998 89988753
No 434
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=74.85 E-value=8 Score=34.31 Aligned_cols=57 Identities=7% Similarity=-0.085 Sum_probs=36.5
Q ss_pred cccccCCC--cc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCG--TA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CG--TG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++ .| .++..|+++|. +|+.+|.+....+.+.+-. .. ..++.++++|++++.
T Consensus 16 ~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~~Dv~~~~ 77 (271)
T 3ek2_A 16 RILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFA-AE-----FGSELVFPCDVADDA 77 (271)
T ss_dssp EEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHH-HH-----TTCCCEEECCTTCHH
T ss_pred EEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHH-HH-----cCCcEEEECCCCCHH
Confidence 45556654 33 26677888885 7999999865444433321 11 124788999999887
No 435
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=74.78 E-value=21 Score=32.26 Aligned_cols=55 Identities=11% Similarity=0.060 Sum_probs=39.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|++.| .++..|++.|. +|+.+|.+++.++...+.. . .++.++++|+.++.
T Consensus 8 ~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~ 65 (263)
T 2a4k_A 8 TILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAAL----E----AEAIAVVADVSDPK 65 (263)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTC----C----SSEEEEECCTTSHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----c----CceEEEEcCCCCHH
Confidence 3444565554 46677888885 7999999998887555432 1 36889999998876
No 436
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=74.66 E-value=4.8 Score=37.33 Aligned_cols=50 Identities=20% Similarity=0.325 Sum_probs=37.6
Q ss_pred cCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 120 DFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 120 l~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
=|.+.| .++..|++.|. +|+.+|++++.++...+. ..++..+++||.++.
T Consensus 8 TGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~ 60 (247)
T 3ged_A 8 TGGGHGIGKQICLDFLEAGD--KVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPL 60 (247)
T ss_dssp ESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHH
T ss_pred ecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHH
Confidence 355554 46788999995 699999999888654432 136889999999887
No 437
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=74.48 E-value=7.8 Score=36.02 Aligned_cols=59 Identities=10% Similarity=-0.066 Sum_probs=42.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|.+.| .++..|++.|. +|+.+|.+.+.++...+... ..+..++.++++|++++.
T Consensus 43 ~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~Dv~d~~ 104 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFARAGA--NVAVAARSPRELSSVTAELG----ELGAGNVIGVRLDVSDPG 104 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHT----TSSSSCEEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHH----hhCCCcEEEEEEeCCCHH
Confidence 4555666655 36778889995 79999999988876655432 223247899999999886
No 438
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=74.41 E-value=17 Score=35.29 Aligned_cols=120 Identities=7% Similarity=0.014 Sum_probs=70.3
Q ss_pred CcccccCCCccHhHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhcccc-------ccC---------C----CCcceEEEe
Q 045407 115 LHLQEDFCGTALLSTEWLRSD-SRRTAVGLDLDLEALEWCMENNLNK-------VGA---------D----GYSRISLFH 173 (382)
Q Consensus 115 ~~LLEl~CGTG~LS~elar~g-~~~tVvGVDLS~emL~~A~e~~~~k-------l~~---------d----~~~RI~l~~ 173 (382)
..|+-||||.=...-++...+ ...+++=||+ |+++++ +.+.+.. ++. . ...+..++-
T Consensus 92 ~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~-K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 92 CQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTR-KLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp SEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHH-HHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHH-HHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 468899999998888887653 2346777777 555554 3222221 100 0 124678999
Q ss_pred ccCCCchhhhhcccchhhhhhccccccccCccccchhhhhhccccccCCCCCcCccCCCCCCccEEEEccchhcccCChh
Q 045407 174 GNVLQPLEAKLVRYEPQKLVRNISLEECDNTLETSTIESAVQDNFTASSGDNCSKQKSSLPARDIICAFNYSCCCLHKRA 253 (382)
Q Consensus 174 gDV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fDiV~afn~S~~yL~~r~ 253 (382)
.|++++.|-.. +... ..+....+=++++ -=+++||.. +
T Consensus 170 ~DL~d~~~l~~-------~L~~---------------------------------~g~d~~~Ptl~ia-EGvL~YL~~-~ 207 (334)
T 3iei_A 170 ADLRDLSELEE-------KLKK---------------------------------CNMNTQLPTLLIA-ECVLVYMTP-E 207 (334)
T ss_dssp CCTTCHHHHHH-------HHHH---------------------------------TTCCTTSCEEEEE-ESCGGGSCH-H
T ss_pred cccccchhHHH-------HHHh---------------------------------cCCCCCCCEEEEE-chhhhCCCH-H
Confidence 99998764111 0000 0111122334444 448888664 7
Q ss_pred HHHHHHHHHHhhccCCCcEEEEeccC
Q 045407 254 DLVLYFKHVLHALSKKGGIFVMDLYG 279 (382)
Q Consensus 254 dL~~yFr~V~~~L~~pGGiFVfDl~g 279 (382)
+..+.|+.+..... +|..+++|..+
T Consensus 208 ~~~~ll~~ia~~f~-~~~~i~yE~i~ 232 (334)
T 3iei_A 208 QSANLLKWAANSFE-RAMFINYEQVN 232 (334)
T ss_dssp HHHHHHHHHHHHCS-SEEEEEEEECC
T ss_pred HHHHHHHHHHHhCC-CceEEEEeccC
Confidence 88999999998876 55555557654
No 439
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=74.39 E-value=9.6 Score=32.86 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=28.7
Q ss_pred hHHHHH-HhCCCCeEEEEeCCHH-HHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 127 LSTEWL-RSDSRRTAVGLDLDLE-ALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 127 LS~ela-r~g~~~tVvGVDLS~e-mL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++..|+ +.| ++|++++.+++ .++...+. ..++.++++|+.++.
T Consensus 21 ~~~~l~~~~g--~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~D~~d~~ 65 (221)
T 3r6d_A 21 LTATLLTYTD--MHITLYGRQLKTRIPPEIID---------HERVTVIEGSFQNPG 65 (221)
T ss_dssp HHHHHHHHCC--CEEEEEESSHHHHSCHHHHT---------STTEEEEECCTTCHH
T ss_pred HHHHHHhcCC--ceEEEEecCccccchhhccC---------CCceEEEECCCCCHH
Confidence 344556 567 47999999987 54322111 136889999998876
No 440
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=74.35 E-value=22 Score=31.03 Aligned_cols=47 Identities=15% Similarity=0.073 Sum_probs=33.4
Q ss_pred CCccHhHHHHH----HhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 122 CGTALLSTEWL----RSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 122 CGTG~LS~ela----r~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
||.|.++..++ +.|. .|+.+|.+++.++...+.. .+.++.+|..++.
T Consensus 6 iG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~ 56 (218)
T 3l4b_C 6 IGGETTAYYLARSMLSRKY--GVVIINKDRELCEEFAKKL----------KATIIHGDGSHKE 56 (218)
T ss_dssp ECCHHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHH
T ss_pred ECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHH
Confidence 66777665544 5564 6999999999887644431 3568999998765
No 441
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=74.29 E-value=6.4 Score=35.84 Aligned_cols=63 Identities=16% Similarity=0.043 Sum_probs=40.9
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|++.| .++..|++.|. +|+.+|.+++.++...+............++.++++|+.++.
T Consensus 20 ~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T 1yxm_A 20 VAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE 85 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHH
Confidence 4555565544 35667788885 799999999887755443211111112347999999999876
No 442
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=74.27 E-value=8.3 Score=34.61 Aligned_cols=56 Identities=11% Similarity=-0.072 Sum_probs=33.4
Q ss_pred ccccCCC--c--c-HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCG--T--A-LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CG--T--G-~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++ . | .++..|++.|. +|+.+|.+++ ++...+...... .++.++.+|+.++.
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~D~~~~~ 71 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAER-LRPEAEKLAEAL-----GGALLFRADVTQDE 71 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTC--EEEEEESCGG-GHHHHHHHHHHT-----TCCEEEECCTTCHH
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHH-HHHHHHHHHHhc-----CCcEEEECCCCCHH
Confidence 4445553 2 3 35667788885 6999999986 221111111111 13678999999876
No 443
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=74.21 E-value=8 Score=36.74 Aligned_cols=41 Identities=15% Similarity=0.076 Sum_probs=32.0
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|+ |.|.+++.+++.- .++|+++|.+++-++++++.
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ 214 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN 214 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc
Confidence 46777886 6788888888753 25899999999999987653
No 444
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=74.07 E-value=5.2 Score=38.43 Aligned_cols=42 Identities=14% Similarity=0.034 Sum_probs=32.8
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|||+ |.+++.+|+.---++|+++|.|++-++++++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 239 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI 239 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc
Confidence 4677777764 88999999864214899999999999998853
No 445
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=73.73 E-value=11 Score=34.11 Aligned_cols=58 Identities=10% Similarity=-0.074 Sum_probs=41.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCC----------------HHHHHHHHHhccccccCCCCcceEEEeccC
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLD----------------LEALEWCMENNLNKVGADGYSRISLFHGNV 176 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS----------------~emL~~A~e~~~~kl~~d~~~RI~l~~gDV 176 (382)
++|=-|++.| .++..|++.|. +|+.+|.+ .+.|+...+... . .+.++.+++.|+
T Consensus 13 ~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~Dv 85 (286)
T 3uve_A 13 VAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK----G-HNRRIVTAEVDV 85 (286)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH----T-TTCCEEEEECCT
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHh----h-cCCceEEEEcCC
Confidence 4556677666 37788899995 69999998 666665444321 1 234799999999
Q ss_pred CCch
Q 045407 177 LQPL 180 (382)
Q Consensus 177 ~~~~ 180 (382)
+++.
T Consensus 86 ~~~~ 89 (286)
T 3uve_A 86 RDYD 89 (286)
T ss_dssp TCHH
T ss_pred CCHH
Confidence 9887
No 446
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=73.72 E-value=14 Score=32.55 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=37.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccC---CCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGA---DGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~---d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+. ....++.++++|+.++.
T Consensus 9 ~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~ 76 (264)
T 2pd6_A 9 LALVTGAGSGIGRAVSVRLAGEGA--TVAACDLDRAAAQETVRLLGG-PGSKEGPPRGNHAAFQADVSEAR 76 (264)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTC-------------CCEEEECCTTSHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHh-cCccccccCcceEEEEecCCCHH
Confidence 3444555444 25667778885 799999999887655443211 010 00136889999998876
No 447
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=73.58 E-value=5.9 Score=37.14 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=29.0
Q ss_pred CCccEEEE----ccchhcccCChhHHHHHHHHHHhhccCCC-c----EEEEec
Q 045407 234 PARDIICA----FNYSCCCLHKRADLVLYFKHVLHALSKKG-G----IFVMDL 277 (382)
Q Consensus 234 ~~fDiV~a----fn~S~~yL~~r~dL~~yFr~V~~~L~~pG-G----iFVfDl 277 (382)
+.+|+|+. --+|+. ..+..|...|-++.+.++++- + +|||.-
T Consensus 80 ~~~DlliGG~PCQ~FS~a--g~rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~EN 130 (230)
T 2qrv_B 80 GPFDLVYGATPPLGHTCD--RPPSWYLFQFHRLLQYARPKPGSPRPFFWMFVD 130 (230)
T ss_dssp CCCSEEEEECCCTTTSSC--SCTHHHHHHHHHHHHHHCCCSSCCSCCEEEEEE
T ss_pred CCCCEEEECCCCCccccc--CCCchHHHHHHHHHHHHCcCcccCCCcEEEEec
Confidence 45788874 334443 467889999999999998432 2 788853
No 448
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=73.34 E-value=7.3 Score=35.58 Aligned_cols=58 Identities=7% Similarity=-0.075 Sum_probs=42.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+... . .+.++.+++.|+.++.
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~----~-~~~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLR----A-AGHDVDGSSCDVTSTD 86 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHH----T-TTCCEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHH----h-cCCcEEEEECCCCCHH
Confidence 4566677666 36778889995 69999999998876655431 1 1347899999999887
No 449
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=73.29 E-value=12 Score=33.02 Aligned_cols=58 Identities=9% Similarity=-0.125 Sum_probs=41.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|++.| .++..|+++|. +|+.++.+++.++...+.... .+.++.+++.|++++.
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~ 67 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKE-----KGFKARGLVLNISDIE 67 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEecCCCHH
Confidence 3455566555 36788889985 699999999888765554321 1247899999999876
No 450
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=72.88 E-value=6.5 Score=37.10 Aligned_cols=41 Identities=7% Similarity=-0.057 Sum_probs=33.4
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.|| |.|.+++.+|+.-- ++|++++.+++-++++++.
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ 203 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSV 203 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 46777776 66899999988643 5899999999999988874
No 451
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=72.87 E-value=19 Score=34.09 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=28.2
Q ss_pred ccccCCCc--cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 117 LQEDFCGT--ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 117 LLEl~CGT--G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
|.=+|+|. +.++..|++.|+..+|+++|.+++.++.+.+.
T Consensus 36 I~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~ 77 (314)
T 3ggo_A 36 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL 77 (314)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT
T ss_pred EEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC
Confidence 44455552 45566677788644799999999999887654
No 452
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=72.53 E-value=9.2 Score=35.70 Aligned_cols=41 Identities=15% Similarity=0.060 Sum_probs=32.4
Q ss_pred CcccccC--CCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDF--CGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~--CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.| .|.|.+++.+|+.- .++|+++|.+++-++++++.
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ 192 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY 192 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc
Confidence 4677777 36788899998864 35899999999999988764
No 453
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=72.07 E-value=13 Score=34.54 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=31.7
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
..||=.|+|+ |.+++.+|+.-...+|+++|.+++-++++++.
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc
Confidence 3566678876 56777777753336899999999999888875
No 454
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=71.94 E-value=10 Score=33.85 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=34.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+. + ..++.++++|+.++.
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~----~----~~~~~~~~~Dv~~~~ 66 (257)
T 3tpc_A 9 VFIVTGASSGLGAAVTRMLAQEGA--TVLGLDLKPPAGEEPAAE----L----GAAVRFRNADVTNEA 66 (257)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSCC--------------------CEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHH----h----CCceEEEEccCCCHH
Confidence 4555566655 36778889995 699999998776544332 1 236889999999876
No 455
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=71.86 E-value=7.7 Score=35.64 Aligned_cols=58 Identities=10% Similarity=-0.002 Sum_probs=42.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.| .++..|++.|. +|+.+|.+.+.++...+... . .+.++.++++|++++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~----~-~~~~~~~~~~Dv~d~~ 90 (283)
T 3v8b_A 30 VALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIV----G-AGGQAIALEADVSDEL 90 (283)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHT----T-TTCCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHH----h-cCCcEEEEEccCCCHH
Confidence 4555676665 36678888995 79999999998876655432 1 2347899999999886
No 456
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=71.85 E-value=10 Score=35.41 Aligned_cols=41 Identities=17% Similarity=0.092 Sum_probs=32.1
Q ss_pred CcccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.++|-.|+ |.|..++.+++.-- ++|+++|.+++-++.+++.
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~ 189 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL 189 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc
Confidence 46777774 77888888887532 5899999999999988763
No 457
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=71.79 E-value=10 Score=35.68 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=32.2
Q ss_pred CcccccCCC-ccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDFCG-TALLSTEWLRSDSRRTAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~CG-TG~LS~elar~g~~~tVvGVDLS~emL~~A~e 155 (382)
.+||=.|+| .|.+++.+|+.- .++|+++|.|++-++++++
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH
Confidence 467777776 588889988754 2589999999999998875
No 458
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.77 E-value=8.7 Score=34.34 Aligned_cols=55 Identities=9% Similarity=-0.039 Sum_probs=40.6
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.. + .++.+++.|+.++.
T Consensus 11 ~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~d~~ 68 (248)
T 3op4_A 11 VALVTGASRGIGKAIAELLAERGA--KVIGTATSESGAQAISDYL----G----DNGKGMALNVTNPE 68 (248)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH----G----GGEEEEECCTTCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----c----ccceEEEEeCCCHH
Confidence 4555676665 46778889995 6999999998887655542 1 25678999999887
No 459
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=71.76 E-value=38 Score=27.70 Aligned_cols=49 Identities=8% Similarity=0.131 Sum_probs=30.1
Q ss_pred CCccHhHHHH----HHhCCCCeEEEEeCC-HHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 122 CGTALLSTEW----LRSDSRRTAVGLDLD-LEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 122 CGTG~LS~el----ar~g~~~tVvGVDLS-~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
||.|.++..+ .+.|. +|+.+|.+ ++-++...+.. . ..+.+++||..++.
T Consensus 9 ~G~G~vG~~la~~L~~~g~--~V~vid~~~~~~~~~~~~~~-----~---~~~~~i~gd~~~~~ 62 (153)
T 1id1_A 9 CGHSILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRL-----G---DNADVIPGDSNDSS 62 (153)
T ss_dssp ECCSHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHH-----C---TTCEEEESCTTSHH
T ss_pred ECCCHHHHHHHHHHHHCCC--CEEEEECCChHHHHHHHHhh-----c---CCCeEEEcCCCCHH
Confidence 4556666554 45564 69999998 45443333221 0 13678999988765
No 460
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=71.61 E-value=21 Score=31.69 Aligned_cols=57 Identities=16% Similarity=0.049 Sum_probs=38.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+++|.+.+.++...+.. +.. .++.++++|+.++.
T Consensus 18 ~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~~~--~~~~~~~~D~~~~~ 77 (278)
T 2bgk_A 18 VAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNI----GSP--DVISFVHCDVTKDE 77 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----CCT--TTEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCChhHHHHHHHHh----CCC--CceEEEECCCCCHH
Confidence 4555565544 35567778885 7999999988775443332 111 27899999999876
No 461
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=71.48 E-value=16 Score=32.62 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=39.4
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... . ....++.++++|+.++.
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~~~~D~~~~~ 71 (260)
T 2z1n_A 9 LAVVTAGSSGLGFASALELARNGA--RLLLFSRNREKLEAAASRIAS-L--VSGAQVDIVAGDIREPG 71 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-H--STTCCEEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh-c--CCCCeEEEEEccCCCHH
Confidence 3445565544 45667788885 799999999877655443211 0 01126889999999876
No 462
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=71.25 E-value=10 Score=35.30 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=32.1
Q ss_pred CcccccC--CCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDF--CGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~--CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||=.| .|.|.+++.+|+.-- ++|+++|.+++-++++++.
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ 184 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKAL 184 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc
Confidence 4566666 467999999888532 5899999999999999864
No 463
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=70.65 E-value=11 Score=34.70 Aligned_cols=58 Identities=12% Similarity=-0.082 Sum_probs=40.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLD------------LEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS------------~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.| .++..|++.|. +|+.+|.+ ++.|+...+... . .+.++.+++.|++++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 30 VAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE----A-LGRRIIASQVDVRDFD 102 (299)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHH----H-TTCCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHH----h-cCCceEEEECCCCCHH
Confidence 4555677666 36788899995 69999987 666665444321 1 1247899999999887
No 464
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=70.64 E-value=7 Score=35.34 Aligned_cols=59 Identities=7% Similarity=-0.069 Sum_probs=42.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+..... ...++.+++.|+.++.
T Consensus 22 ~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~ 83 (266)
T 4egf_A 22 RALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQ----FGTDVHTVAIDLAEPD 83 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH----HCCCEEEEECCTTSTT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh----cCCcEEEEEecCCCHH
Confidence 4555666665 36778888895 6999999998887665542211 1247899999999887
No 465
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=70.48 E-value=5.8 Score=36.97 Aligned_cols=57 Identities=7% Similarity=-0.100 Sum_probs=41.9
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++==|.+.| .++..|++.|. +|+.+|.+++.|+...+...+ . +.++..+++||.++.
T Consensus 12 alVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~----~-g~~~~~~~~Dv~~~~ 71 (255)
T 4g81_D 12 ALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTR----K-GYDAHGVAFDVTDEL 71 (255)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHH----T-TCCEEECCCCTTCHH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh----c-CCcEEEEEeeCCCHH
Confidence 444455555 36788999995 799999999998876654322 2 247889999999887
No 466
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=70.41 E-value=34 Score=29.83 Aligned_cols=59 Identities=8% Similarity=-0.013 Sum_probs=39.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccC--CCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNV--LQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV--~~~~ 180 (382)
+++=-|++.| .++..|++.|. +|+.+|.+++.++...+.... .+..++.++..|+ .++.
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~d~d~~~~~ 79 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAHGA--SVVLLGRTEASLAEVSDQIKS----AGQPQPLIIALNLENATAQ 79 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----TTSCCCEEEECCTTTCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHh----cCCCCceEEEeccccCCHH
Confidence 4555676665 36778888885 699999999988766554321 2224567788776 5544
No 467
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=69.96 E-value=9.5 Score=34.00 Aligned_cols=58 Identities=7% Similarity=-0.070 Sum_probs=40.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+... .. +.++.++++|+.++.
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~----~~-~~~~~~~~~Dv~~~~ 69 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELT----AA-GAKVHVLELDVADRQ 69 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHH----HT-TCCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHH----hc-CCcEEEEECCCCCHH
Confidence 3455566555 45677888885 79999999988875544321 11 237889999999876
No 468
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=69.63 E-value=14 Score=33.60 Aligned_cols=58 Identities=5% Similarity=-0.192 Sum_probs=40.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+++.++...+.... . +.++.++++|+.++.
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~----~-~~~~~~~~~Dv~~~~ 84 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELRE----A-GVEADGRTCDVRSVP 84 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----T-TCCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh----c-CCceEEEECCCCCHH
Confidence 3555566554 45677888885 799999999887654443211 1 236889999999876
No 469
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=69.52 E-value=9.4 Score=35.44 Aligned_cols=41 Identities=10% Similarity=0.175 Sum_probs=31.6
Q ss_pred CcccccC--CCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 115 LHLQEDF--CGTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 115 ~~LLEl~--CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
.+||-.| .|.|..++.+++.-- ++|+++|.+++.++.+++.
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~ 184 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA 184 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc
Confidence 4577777 577888888887432 5899999999999988763
No 470
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=69.45 E-value=41 Score=29.21 Aligned_cols=51 Identities=4% Similarity=-0.119 Sum_probs=37.7
Q ss_pred cCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 120 DFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 120 l~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
-|++.| .++..|+++|. +|+.+|.+++.++...+.. ..++.++..|+.++.
T Consensus 7 TGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~ 60 (230)
T 3guy_A 7 TGASSGLGAELAKLYDAEGK--ATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQ 60 (230)
T ss_dssp ESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHH
T ss_pred ecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHH
Confidence 454444 36678888995 5999999999887665542 136889999998876
No 471
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=69.39 E-value=13 Score=34.02 Aligned_cols=58 Identities=3% Similarity=-0.101 Sum_probs=38.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHH-------HHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLE-------ALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~e-------mL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+ .|+...+.... .+.++.+++.|+.++.
T Consensus 11 ~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~ 78 (285)
T 3sc4_A 11 TMFISGGSRGIGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEE-----AGGQALPIVGDIRDGD 78 (285)
T ss_dssp EEEEESCSSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHH-----HTSEEEEEECCTTSHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHh-----cCCcEEEEECCCCCHH
Confidence 4555677666 47788888885 7999999876 23222222111 1247899999999876
No 472
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=69.33 E-value=7.4 Score=32.58 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=28.1
Q ss_pred CChhHHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhh
Q 045407 250 HKRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKL 287 (382)
Q Consensus 250 ~~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl 287 (382)
.+.+++..-++.+.+.+....|++|| |++||+++....
T Consensus 39 ~~~~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~ 77 (135)
T 1pdo_A 39 ENAETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAAS 77 (135)
T ss_dssp CCHHHHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHH
Confidence 34567888888888888734577777 999999876533
No 473
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=69.28 E-value=19 Score=32.88 Aligned_cols=59 Identities=3% Similarity=0.002 Sum_probs=40.9
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeC-CHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDL-DLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDL-S~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.|. ++..|++.|. +|+.+|. +++.++...+... .....++.++++|++++.
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~d~~ 89 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGA--NIVLNGFGAPDEIRTVTDEVA----GLSSGTVLHHPADMTKPS 89 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTC--EEEEECCCCHHHHHHHHHHHH----TTCSSCEEEECCCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHh----hccCCcEEEEeCCCCCHH
Confidence 45666766653 6778889995 7999999 6666665444321 112357899999999876
No 474
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=69.23 E-value=10 Score=32.79 Aligned_cols=56 Identities=13% Similarity=0.047 Sum_probs=35.8
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++=-|++.| .++..|++.|..++|+++|.+++.++...+ + ...++.++.+|+.++.
T Consensus 6 vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-----~---~~~~~~~~~~D~~~~~ 64 (250)
T 1yo6_A 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-----I---KDSRVHVLPLTVTCDK 64 (250)
T ss_dssp EEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-----C---CCTTEEEEECCTTCHH
T ss_pred EEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-----c---cCCceEEEEeecCCHH
Confidence 444454433 345566777722479999999877653322 1 1247899999998876
No 475
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=69.05 E-value=9.9 Score=34.76 Aligned_cols=55 Identities=13% Similarity=0.017 Sum_probs=41.2
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.. + .++.++++|+.++.
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~d~~ 87 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGY--GVALAGRRLDALQETAAEI----G----DDALCVPTDVTDPD 87 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----T----SCCEEEECCTTSHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHh----C----CCeEEEEecCCCHH
Confidence 4555676655 36778888995 6999999999887665542 1 36889999999887
No 476
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=68.85 E-value=21 Score=32.51 Aligned_cols=58 Identities=3% Similarity=-0.086 Sum_probs=38.4
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeCC-HHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDLD-LEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDLS-~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.|. ++..|++.|. +|+.+|.. .+.++...+.. . . .+.++.++++|++++.
T Consensus 33 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l-~---~-~~~~~~~~~~Dv~d~~ 94 (271)
T 3v2g_A 33 TAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEI-E---Q-AGGRAVAIRADNRDAE 94 (271)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHH-H---H-TTCCEEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHH-H---h-cCCcEEEEECCCCCHH
Confidence 46666777663 7788899995 69998665 44444333321 1 1 1247889999999887
No 477
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=68.85 E-value=7.6 Score=36.49 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=30.2
Q ss_pred CcccccCCCc-cHhHHHHHHhCCCC-eEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDFCGT-ALLSTEWLRSDSRR-TAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~CGT-G~LS~elar~g~~~-tVvGVDLS~emL~~A~e 155 (382)
.+||=.|+|+ |.+++.+|+.-- + +|+++|.+++-++++++
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH
Confidence 4577777765 889999998532 4 79999999988876543
No 478
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=68.68 E-value=8.3 Score=34.59 Aligned_cols=61 Identities=5% Similarity=-0.053 Sum_probs=42.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.+|=-|++.| .++..|++.|. +|+.+|.+++.++...+..... . .+..++.+++.|+.++.
T Consensus 9 ~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dv~~~~ 72 (250)
T 3nyw_A 9 LAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRS-N-KHVQEPIVLPLDITDCT 72 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHH-C-TTSCCCEEEECCTTCHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHh-c-cccCcceEEeccCCCHH
Confidence 4555566665 46778889995 7999999999887665543221 0 12247889999999876
No 479
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=68.41 E-value=39 Score=29.64 Aligned_cols=46 Identities=17% Similarity=0.085 Sum_probs=32.4
Q ss_pred CCccHhHHHHHHhCCC--CeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 122 CGTALLSTEWLRSDSR--RTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 122 CGTG~LS~elar~g~~--~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
||.|.++..+++.-.. + |+++|.+++.++.+. . .+.++.||..++.
T Consensus 15 ~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~-----------~~~~i~gd~~~~~ 62 (234)
T 2aef_A 15 CGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-S-----------GANFVHGDPTRVS 62 (234)
T ss_dssp ESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-T-----------TCEEEESCTTCHH
T ss_pred ECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-c-----------CCeEEEcCCCCHH
Confidence 4556777666655332 4 999999999876554 2 2578999988765
No 480
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=68.34 E-value=12 Score=35.09 Aligned_cols=35 Identities=6% Similarity=-0.142 Sum_probs=27.9
Q ss_pred CC-CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 121 FC-GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 121 ~C-GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
|+ |.|.+++.+|+.-- ++|+++|.+++-++++++.
T Consensus 173 g~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~ 208 (349)
T 3pi7_A 173 GASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDI 208 (349)
T ss_dssp TTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHH
T ss_pred CCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc
Confidence 44 46888888887643 5899999999999998764
No 481
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=68.10 E-value=8.4 Score=35.64 Aligned_cols=39 Identities=5% Similarity=-0.090 Sum_probs=32.2
Q ss_pred ccccCC--CccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 117 LQEDFC--GTALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 117 LLEl~C--GTG~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
||=.|| |.|.+++.+|+.-- ++|+++|.|++-++++++-
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~~~~~~~~~~l 190 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKLG-YQVAAVSGRESTHGYLKSL 190 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGGHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 666676 67999999998643 5899999999999999864
No 482
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=68.06 E-value=11 Score=35.59 Aligned_cols=40 Identities=8% Similarity=-0.052 Sum_probs=31.3
Q ss_pred CcccccC--CCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDF--CGTALLSTEWLRSDSRRTAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~--CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e 155 (382)
.+||=.| .|.|..++.+++.-- ++|+++|.+++-++++++
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH
Confidence 4577776 467888888887542 589999999999998854
No 483
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=67.89 E-value=20 Score=32.57 Aligned_cols=57 Identities=9% Similarity=0.002 Sum_probs=39.7
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+....+.+.+-. . .+.++.++++|+.++.
T Consensus 33 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-----~-~~~~~~~~~~Dv~d~~ 92 (273)
T 3uf0_A 33 TAVVTGAGSGIGRAIAHGYARAGA--HVLAWGRTDGVKEVADEIA-----D-GGGSAEAVVADLADLE 92 (273)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTHHHHHHHHHH-----T-TTCEEEEEECCTTCHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCHHHHHHHHHHHH-----h-cCCcEEEEEecCCCHH
Confidence 4556677666 47788899995 6999997655444444331 1 2347899999999887
No 484
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=67.36 E-value=10 Score=33.40 Aligned_cols=58 Identities=12% Similarity=-0.093 Sum_probs=38.5
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|+++|. +|+++|.+++.++...+.... ...++.++++|+.++.
T Consensus 15 ~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~~ 75 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRM-----EGHDVSSVVMDVTNTE 75 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEecCCCHH
Confidence 3554555443 35566777885 799999999877654433211 1237899999999876
No 485
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=67.31 E-value=20 Score=32.78 Aligned_cols=59 Identities=0% Similarity=-0.236 Sum_probs=40.4
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEe-CCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLD-LDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVD-LS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+| .+++.++...+..... ...++.+++.|+.++.
T Consensus 11 ~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 11 VALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSAAEANALSATLNAR----RPNSAITVQADLSNVA 73 (291)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHH----STTCEEEEECCCSSSC
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHhhh----cCCeeEEEEeecCCcc
Confidence 3555566655 36677888885 799999 9998877655432101 1247889999998876
No 486
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=67.05 E-value=23 Score=31.62 Aligned_cols=45 Identities=9% Similarity=0.144 Sum_probs=33.8
Q ss_pred HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 126 LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 126 ~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
.++..|++.|. +|+.+|.+++.++...+.. + .++.++.+|+.++.
T Consensus 15 aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~~~~ 59 (248)
T 3asu_A 15 CITRRFIQQGH--KVIATGRRQERLQELKDEL----G----DNLYIAQLDVRNRA 59 (248)
T ss_dssp HHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----C----TTEEEEECCTTCHH
T ss_pred HHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh----c----CceEEEEcCCCCHH
Confidence 35677888885 7999999998887554432 1 26889999998876
No 487
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=66.98 E-value=7.5 Score=33.41 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=28.0
Q ss_pred ChhHHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhh
Q 045407 251 KRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKL 287 (382)
Q Consensus 251 ~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl 287 (382)
+.+++..-++.+.+.+....|++|| |++||+++....
T Consensus 40 ~~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~ 77 (150)
T 3ipr_A 40 DVQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAV 77 (150)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHH
Confidence 4567888888888888745688777 999999875533
No 488
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=66.60 E-value=13 Score=33.47 Aligned_cols=55 Identities=7% Similarity=-0.000 Sum_probs=34.8
Q ss_pred cccccCC-Ccc----HhHHHHHHhCCCCeEEEEeCCHHH-HHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFC-GTA----LLSTEWLRSDSRRTAVGLDLDLEA-LEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~C-GTG----~LS~elar~g~~~tVvGVDLS~em-L~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+++=-|+ |+| .++..|++.|. +|+.+|.+++- ++...+. ++ .++.++++|+.++.
T Consensus 9 ~vlVTGa~~s~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~~----~~~~~~~~Dv~~~~ 69 (269)
T 2h7i_A 9 RILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDRLRLIQRITDR----LP----AKAPLLELDVQNEE 69 (269)
T ss_dssp EEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEECSCHHHHHHHHTT----SS----SCCCEEECCTTCHH
T ss_pred EEEEECCCCCCchHHHHHHHHHHCCC--EEEEEecChHHHHHHHHHh----cC----CCceEEEccCCCHH
Confidence 3455565 132 34566777885 79999998754 3433222 21 36788999999876
No 489
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=66.55 E-value=13 Score=33.42 Aligned_cols=58 Identities=16% Similarity=0.059 Sum_probs=38.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+++|.+++.++...+.... . +.++.++.+|+.++.
T Consensus 33 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~----~-~~~~~~~~~Dl~~~~ 93 (272)
T 1yb1_A 33 IVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKG----L-GAKVHTFVVDCSNRE 93 (272)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----T-TCCEEEEECCTTCHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHh----c-CCeEEEEEeeCCCHH
Confidence 4555565444 35566777885 799999999877655443211 1 237899999998876
No 490
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=66.42 E-value=12 Score=35.07 Aligned_cols=60 Identities=8% Similarity=-0.001 Sum_probs=42.7
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.|. ++..|+++|+ +|++++.+.+.++...+.... .+ ...++.+++.|+.++.
T Consensus 10 ~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~-~~--~~~~~~~~~~Dl~~~~ 72 (319)
T 3ioy_A 10 TAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEA-EG--SGPEVMGVQLDVASRE 72 (319)
T ss_dssp EEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-HT--CGGGEEEEECCTTCHH
T ss_pred EEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh-cC--CCCeEEEEECCCCCHH
Confidence 45556776653 6778888995 699999999988766554321 11 1237999999999876
No 491
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=66.36 E-value=8.4 Score=36.24 Aligned_cols=56 Identities=5% Similarity=-0.009 Sum_probs=42.8
Q ss_pred cccccCCCccH---hHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCchh
Q 045407 116 HLQEDFCGTAL---LSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPLE 181 (382)
Q Consensus 116 ~LLEl~CGTG~---LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~~ 181 (382)
.+|==|.+.|. ++..|++.|. +|+.+|.+.+.|+-+.+.. + .++..+++||.++..
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~----g----~~~~~~~~Dv~~~~~ 89 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI----G----GGAVGIQADSANLAE 89 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH----C----TTCEEEECCTTCHHH
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc----C----CCeEEEEecCCCHHH
Confidence 35555777764 7889999995 7999999999998765542 2 357789999999873
No 492
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=66.18 E-value=10 Score=33.97 Aligned_cols=58 Identities=12% Similarity=0.012 Sum_probs=41.8
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.+|.+.+.++...+.... .+.++.++++|+.++.
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~ 74 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQ-----AGGKAIGLECNVTDEQ 74 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCHH
Confidence 4555666665 36778889995 699999999887765554211 1247899999999887
No 493
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=66.01 E-value=24 Score=32.00 Aligned_cols=57 Identities=5% Similarity=-0.092 Sum_probs=38.0
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCH-HHHHHHHHhccccccCCCCcceEEEeccCCC
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDL-EALEWCMENNLNKVGADGYSRISLFHGNVLQ 178 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~-emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~ 178 (382)
++|=-|++.| .++..|++.|. +|+.+|.++ +.++...+..... .+.++.++++|+.+
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKE----RSNTAVVCQADLTN 85 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHH----STTCEEEEECCCSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhh----cCCceEEEEeecCC
Confidence 3555566655 46677888995 799999997 6665443332101 12478899999998
No 494
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=65.84 E-value=4 Score=38.15 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhccCCCcEEEEec
Q 045407 255 LVLYFKHVLHALSKKGGIFVMDL 277 (382)
Q Consensus 255 L~~yFr~V~~~L~~pGGiFVfDl 277 (382)
+...++.++++|+ |||.+++-+
T Consensus 76 l~~~~~~~~rvLk-~~G~l~i~~ 97 (297)
T 2zig_A 76 LDRVWREVFRLLV-PGGRLVIVV 97 (297)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHHHHHHcC-CCcEEEEEE
Confidence 5667899999999 999988744
No 495
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=65.76 E-value=20 Score=32.70 Aligned_cols=56 Identities=13% Similarity=-0.044 Sum_probs=39.3
Q ss_pred ccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 117 LQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 117 LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
+|=-|++.| .++..|++.|. +|+.+|.+++.++...+... .. .++.++++|+.++.
T Consensus 24 vlVTGas~gIG~aia~~La~~G~--~V~~~~r~~~~~~~~~~~~~----~~--~~~~~~~~Dv~d~~ 82 (272)
T 2nwq_A 24 LFITGATSGFGEACARRFAEAGW--SLVLTGRREERLQALAGELS----AK--TRVLPLTLDVRDRA 82 (272)
T ss_dssp EEESSTTTSSHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHT----TT--SCEEEEECCTTCHH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhh----cC--CcEEEEEcCCCCHH
Confidence 444555444 46677888885 79999999988876554421 11 36889999999876
No 496
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=65.44 E-value=49 Score=33.20 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=42.0
Q ss_pred CCccEEEE----ccchhcccCChhHHHHHHHHHHhhccCC-Cc----EEEEeccCCCchhhhhHhhhccCCeEEEEeecc
Q 045407 234 PARDIICA----FNYSCCCLHKRADLVLYFKHVLHALSKK-GG----IFVMDLYGGTSSEQKLRLQRRFANFTYVWEQAE 304 (382)
Q Consensus 234 ~~fDiV~a----fn~S~~yL~~r~dL~~yFr~V~~~L~~p-GG----iFVfDl~gg~s~e~kl~~~R~~~~~tyvWeq~~ 304 (382)
+.+|+|+. --+|.. ..+..|...|-++.+.++|+ |+ +|||.--.|-....+....+...-...+-....
T Consensus 236 ~~~DlliGG~PCQ~FS~A--~~Rg~Lf~ef~Riv~~~rPk~~~~~P~~fv~ENV~gL~~~~~~~i~~~L~v~~~VLnA~d 313 (386)
T 2pv0_B 236 GPFDLVYGATPPLGHTCD--RPPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVH 313 (386)
T ss_dssp CCCSEEEEECCCTTTCSC--SCTHHHHHHHHHHHHHHSCCSSCCSCCEEEEEECSCSCHHHHHHHHHHTTSCCCEEECCC
T ss_pred CCCCEEEECCCCCccccc--CCcchHHHHHHHHHHHhCCCcccCCCcEEEEEechhhhhcchHHHHHHHcCCeEEEEccc
Confidence 45777774 234544 46788999999999999943 33 789953333222111111111111111335556
Q ss_pred cccccceEE
Q 045407 305 FDIIERKTR 313 (382)
Q Consensus 305 fD~~~~~~r 313 (382)
|-+-+++-|
T Consensus 314 yGVPQrRrR 322 (386)
T 2pv0_B 314 GGSLQNAVR 322 (386)
T ss_dssp SSSCCCEEE
T ss_pred cCccccccE
Confidence 766555555
No 497
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=65.21 E-value=33 Score=30.32 Aligned_cols=58 Identities=5% Similarity=-0.120 Sum_probs=38.3
Q ss_pred cccccCCCcc---HhHHHHHHhCCCCeEEEEeCCHHHHHHHHHhccccccCCCCcceEEEeccCCCch
Q 045407 116 HLQEDFCGTA---LLSTEWLRSDSRRTAVGLDLDLEALEWCMENNLNKVGADGYSRISLFHGNVLQPL 180 (382)
Q Consensus 116 ~LLEl~CGTG---~LS~elar~g~~~tVvGVDLS~emL~~A~e~~~~kl~~d~~~RI~l~~gDV~~~~ 180 (382)
++|=-|++.| .++..|++.|. +|+.++.+++-++...+.... . ..++.++.+|+.++.
T Consensus 16 ~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~ 76 (266)
T 1xq1_A 16 TVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQK----K-GFQVTGSVCDASLRP 76 (266)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH----T-TCCEEEEECCTTSHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHh----c-CCeeEEEECCCCCHH
Confidence 3554555444 34566777885 799999999877655443211 1 236889999998876
No 498
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=65.08 E-value=7.6 Score=32.86 Aligned_cols=86 Identities=16% Similarity=0.165 Sum_probs=51.5
Q ss_pred ChhHHHHHHHHHHhhccCCCcEEEE-eccCCCchhhhhHhhhccCCeEEEEeecccccccceEEEEEEEEeecccceeee
Q 045407 251 KRADLVLYFKHVLHALSKKGGIFVM-DLYGGTSSEQKLRLQRRFANFTYVWEQAEFDIIERKTRISLHFHLQKEQKKLRH 329 (382)
Q Consensus 251 ~r~dL~~yFr~V~~~L~~pGGiFVf-Dl~gg~s~e~kl~~~R~~~~~tyvWeq~~fD~~~~~~ri~L~F~~~~~~~~lr~ 329 (382)
+.+++..-++.+.+.+.. .|++|| |++||+++..........+++..+ . + +++- ++-.
T Consensus 44 ~~~~~~~~i~~~i~~~~~-~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi-~--------G---vNlp--------mlle 102 (142)
T 3bed_A 44 GLSGTQAKLAAILKEAGN-VPTLVLADLXGGTPCNVAMMAMGTYPQLRVV-A--------G---LNLA--------MAIE 102 (142)
T ss_dssp HHHHHHHHHHHHHHHHCS-CCEEEEESSTTSHHHHHHHHHTTTCTTEEEE-E--------S---CCHH--------HHHH
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEEECCCCHHHHHHHHHhccCCCEEEE-e--------C---CCHH--------HHHH
Confidence 345777778888888874 787777 999999876543332211122211 0 0 0110 1212
Q ss_pred eeeeeEEecCHHHHHHHHHHcCCcEEEEEe
Q 045407 330 AFSYNWRLWSLPEIKDCLEEAGFRSVHFWL 359 (382)
Q Consensus 330 ~fsy~~Rlysl~EI~d~LeeAGF~~V~v~~ 359 (382)
+... +--++.|+.+.+.++|=..|..+.
T Consensus 103 ~~~~--~~~~l~el~~~~~~~~~~~i~~~~ 130 (142)
T 3bed_A 103 AAVS--PVENVDELAAYLTQIGQSAVTTID 130 (142)
T ss_dssp HHHC--CCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHc--cCCCHHHHHHHHHHHhhHHheecC
Confidence 2222 456899999989999988887764
No 499
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=64.86 E-value=27 Score=33.17 Aligned_cols=40 Identities=10% Similarity=0.055 Sum_probs=32.2
Q ss_pred CcccccC--CCccHhHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 045407 115 LHLQEDF--CGTALLSTEWLRSDSRRTAVGLDLDLEALEWCME 155 (382)
Q Consensus 115 ~~LLEl~--CGTG~LS~elar~g~~~tVvGVDLS~emL~~A~e 155 (382)
..||=.| .|.|.+++.+|+.- .++|+++|.+++-++++++
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH
Confidence 4566776 56799999998854 3589999999999998876
No 500
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=64.78 E-value=19 Score=33.38 Aligned_cols=38 Identities=18% Similarity=0.115 Sum_probs=25.6
Q ss_pred ccccCCCc--cHhHHHHHHhCCCCeEEEEeCCHHHHHHHHHh
Q 045407 117 LQEDFCGT--ALLSTEWLRSDSRRTAVGLDLDLEALEWCMEN 156 (382)
Q Consensus 117 LLEl~CGT--G~LS~elar~g~~~tVvGVDLS~emL~~A~e~ 156 (382)
|-=+|||. ..++..|++.|+ +|++.|.+++.++...+.
T Consensus 10 I~iIG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~~ 49 (303)
T 3g0o_A 10 VGIVGLGSMGMGAARSCLRAGL--STWGADLNPQACANLLAE 49 (303)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHT
T ss_pred EEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHc
Confidence 33345543 334556677785 799999999988776654
Done!