Query 045410
Match_columns 589
No_of_seqs 156 out of 2263
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 12:58:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045410.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045410hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.5E-42 3.1E-47 374.7 40.4 529 24-564 32-565 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2.2E-41 4.7E-46 347.5 36.8 460 25-563 17-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.7E-36 3.6E-41 327.7 45.8 455 26-564 11-481 (489)
4 PRK15462 dipeptide/tripeptide 100.0 9.2E-36 2E-40 317.4 45.9 447 26-551 6-469 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 1.3E-35 2.9E-40 320.4 45.2 453 25-563 6-472 (475)
6 PRK09584 tppB putative tripept 100.0 3.1E-34 6.7E-39 311.6 47.4 458 25-564 17-484 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 1E-25 2.3E-30 248.2 34.2 336 43-440 1-343 (654)
8 PRK03545 putative arabinose tr 99.9 3.9E-24 8.4E-29 226.1 40.4 374 27-559 7-380 (390)
9 PRK05122 major facilitator sup 99.9 4.8E-24 1E-28 226.0 41.2 378 25-559 11-389 (399)
10 PRK10504 putative transporter; 99.9 2.6E-23 5.6E-28 225.4 41.2 179 27-234 8-186 (471)
11 PRK12382 putative transporter; 99.9 2.4E-23 5.2E-28 220.1 39.9 375 27-558 13-388 (392)
12 PRK11551 putative 3-hydroxyphe 99.9 2.5E-23 5.5E-28 220.9 40.0 174 26-228 12-185 (406)
13 PRK14995 methyl viologen resis 99.9 2.1E-23 4.6E-28 227.2 37.5 402 27-516 4-412 (495)
14 PRK11663 regulatory protein Uh 99.9 2.2E-23 4.9E-28 223.4 36.5 163 34-225 28-190 (434)
15 COG2271 UhpC Sugar phosphate p 99.9 1.4E-24 3E-29 218.6 25.2 405 25-559 21-434 (448)
16 PRK11646 multidrug resistance 99.9 4.8E-23 1E-27 218.3 38.1 345 32-518 13-360 (400)
17 TIGR01299 synapt_SV2 synaptic 99.9 1.5E-22 3.2E-27 226.0 43.6 155 48-230 185-352 (742)
18 PRK10054 putative transporter; 99.9 3.1E-23 6.6E-28 219.5 36.4 176 27-231 5-180 (395)
19 PRK10489 enterobactin exporter 99.9 3.2E-23 6.9E-28 221.1 36.2 392 34-573 22-413 (417)
20 PRK09874 drug efflux system pr 99.9 2.2E-22 4.8E-27 213.6 40.8 383 26-559 10-398 (408)
21 PRK10642 proline/glycine betai 99.9 5.8E-22 1.3E-26 215.8 43.1 175 28-223 15-203 (490)
22 TIGR00893 2A0114 d-galactonate 99.9 1.5E-22 3.2E-27 212.6 36.7 156 48-231 12-167 (399)
23 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1E-22 2.3E-27 216.6 35.7 179 25-232 4-188 (412)
24 PLN00028 nitrate transmembrane 99.9 2.5E-22 5.3E-27 217.6 39.1 175 27-231 34-217 (476)
25 TIGR00903 2A0129 major facilit 99.9 2.1E-22 4.6E-27 210.5 37.1 154 49-232 10-164 (368)
26 COG2814 AraJ Arabinose efflux 99.9 7.5E-22 1.6E-26 201.7 39.9 377 24-561 8-388 (394)
27 PRK10213 nepI ribonucleoside t 99.9 7.4E-22 1.6E-26 208.8 41.3 172 25-225 16-187 (394)
28 PRK10077 xylE D-xylose transpo 99.9 1.1E-22 2.5E-27 220.7 36.0 152 60-228 50-210 (479)
29 PRK09705 cynX putative cyanate 99.9 2.9E-22 6.3E-27 211.9 38.0 367 37-563 17-385 (393)
30 TIGR00891 2A0112 putative sial 99.9 2.6E-22 5.6E-27 212.4 37.2 172 24-224 7-180 (405)
31 TIGR00900 2A0121 H+ Antiporter 99.9 2.8E-22 6E-27 208.8 36.6 357 34-516 4-362 (365)
32 PRK11273 glpT sn-glycerol-3-ph 99.9 4.5E-22 9.8E-27 214.4 38.8 172 35-231 31-206 (452)
33 TIGR00887 2A0109 phosphate:H+ 99.9 6.4E-22 1.4E-26 216.1 40.2 179 27-228 14-220 (502)
34 TIGR00879 SP MFS transporter, 99.9 1.6E-22 3.4E-27 218.4 35.0 143 62-229 68-213 (481)
35 TIGR00892 2A0113 monocarboxyla 99.9 1.5E-22 3.2E-27 218.2 33.8 151 52-231 41-192 (455)
36 PRK09556 uhpT sugar phosphate 99.9 9E-23 1.9E-27 220.8 31.7 181 27-230 23-209 (467)
37 TIGR00890 2A0111 Oxalate/Forma 99.9 1.9E-22 4.2E-27 210.8 33.2 354 49-552 22-375 (377)
38 PRK15402 multidrug efflux syst 99.9 1.9E-21 4E-26 206.7 40.5 158 43-229 27-184 (406)
39 PRK10406 alpha-ketoglutarate t 99.9 1.7E-21 3.7E-26 208.8 40.3 173 31-224 24-210 (432)
40 TIGR00899 2A0120 sugar efflux 99.9 1.1E-21 2.3E-26 205.8 37.9 170 36-231 4-174 (375)
41 PRK09952 shikimate transporter 99.9 1.3E-21 2.8E-26 210.0 39.1 178 24-222 17-209 (438)
42 TIGR00711 efflux_EmrB drug res 99.9 3E-22 6.6E-27 217.6 33.4 392 32-516 5-409 (485)
43 PRK12307 putative sialic acid 99.9 1.1E-21 2.3E-26 209.8 36.9 166 26-220 15-180 (426)
44 PRK03699 putative transporter; 99.9 2.4E-21 5.1E-26 205.1 38.8 173 25-226 3-176 (394)
45 PRK03893 putative sialic acid 99.9 8.3E-22 1.8E-26 215.0 35.7 167 25-220 16-182 (496)
46 TIGR00894 2A0114euk Na(+)-depe 99.9 4.3E-21 9.3E-26 207.7 38.3 148 59-232 70-218 (465)
47 PRK10091 MFS transport protein 99.9 7.7E-21 1.7E-25 200.3 39.2 170 30-228 4-173 (382)
48 TIGR00895 2A0115 benzoate tran 99.9 4.2E-21 9.1E-26 202.3 37.0 177 26-231 14-190 (398)
49 PF07690 MFS_1: Major Facilita 99.9 3.1E-22 6.8E-27 207.4 27.7 166 35-228 2-167 (352)
50 cd06174 MFS The Major Facilita 99.9 5.2E-21 1.1E-25 197.7 36.5 347 33-556 3-349 (352)
51 PRK03633 putative MFS family t 99.9 7E-21 1.5E-25 200.5 37.5 156 27-211 4-159 (381)
52 PRK15011 sugar efflux transpor 99.9 1.4E-20 3E-25 199.2 39.7 176 29-231 15-192 (393)
53 TIGR00710 efflux_Bcr_CflA drug 99.9 2.6E-20 5.5E-25 195.9 41.4 176 27-231 3-178 (385)
54 PRK15075 citrate-proton sympor 99.9 9.5E-21 2.1E-25 203.1 37.6 174 26-220 12-199 (434)
55 PRK11652 emrD multidrug resist 99.9 2.4E-20 5.3E-25 197.3 40.3 173 25-226 4-176 (394)
56 PRK15403 multidrug efflux syst 99.9 5.5E-20 1.2E-24 195.8 42.1 148 56-231 42-189 (413)
57 PRK11195 lysophospholipid tran 99.9 4.2E-20 9.1E-25 195.4 40.5 159 32-223 6-164 (393)
58 KOG1330 Sugar transporter/spin 99.9 4.5E-23 9.8E-28 209.6 16.5 184 22-234 26-210 (493)
59 TIGR00898 2A0119 cation transp 99.9 3.7E-21 8E-26 210.4 33.0 145 54-229 113-260 (505)
60 TIGR00897 2A0118 polyol permea 99.9 6.5E-20 1.4E-24 194.6 41.5 168 27-219 11-179 (402)
61 PRK09528 lacY galactoside perm 99.9 5.1E-21 1.1E-25 204.3 33.1 394 27-559 8-403 (420)
62 TIGR00712 glpT glycerol-3-phos 99.9 7.8E-21 1.7E-25 204.0 34.3 158 50-232 47-205 (438)
63 KOG0254 Predicted transporter 99.9 2.9E-21 6.2E-26 211.3 30.9 423 47-574 64-498 (513)
64 TIGR00881 2A0104 phosphoglycer 99.9 1.1E-20 2.3E-25 197.7 29.0 151 50-228 15-166 (379)
65 PRK11043 putative transporter; 99.9 2.4E-19 5.2E-24 190.2 39.5 146 56-229 32-177 (401)
66 PRK10133 L-fucose transporter; 99.9 2.5E-19 5.4E-24 191.9 39.9 163 18-206 15-177 (438)
67 TIGR00902 2A0127 phenyl propri 99.9 2.9E-19 6.2E-24 188.3 39.3 364 32-554 7-374 (382)
68 PRK10473 multidrug efflux syst 99.9 3.8E-19 8.2E-24 188.0 40.1 169 32-229 6-174 (392)
69 KOG0569 Permease of the major 99.9 2E-20 4.4E-25 196.9 27.9 400 68-573 63-468 (485)
70 PRK15034 nitrate/nitrite trans 99.9 9.4E-19 2E-23 185.1 39.7 152 29-205 34-186 (462)
71 PRK11102 bicyclomycin/multidru 99.9 1.1E-18 2.4E-23 183.2 40.2 154 48-230 10-163 (377)
72 TIGR00889 2A0110 nucleoside tr 99.9 6.4E-19 1.4E-23 187.8 38.4 396 31-562 4-405 (418)
73 PF00854 PTR2: POT family; In 99.9 2.2E-21 4.9E-26 203.5 18.3 366 96-501 1-370 (372)
74 TIGR00882 2A0105 oligosacchari 99.9 4.9E-19 1.1E-23 187.5 36.1 389 29-555 2-391 (396)
75 PRK11010 ampG muropeptide tran 99.9 5.5E-18 1.2E-22 184.2 43.3 175 27-229 10-191 (491)
76 PRK08633 2-acyl-glycerophospho 99.9 1.1E-18 2.4E-23 209.4 41.0 157 27-208 7-165 (1146)
77 KOG2532 Permease of the major 99.9 2.1E-19 4.5E-24 191.2 29.8 377 59-559 67-447 (466)
78 PF05977 MFS_3: Transmembrane 99.9 3.6E-18 7.7E-23 184.9 39.7 354 35-517 16-369 (524)
79 TIGR00792 gph sugar (Glycoside 99.9 1.9E-18 4.2E-23 185.2 37.5 355 39-518 9-381 (437)
80 COG2223 NarK Nitrate/nitrite t 99.9 7.7E-19 1.7E-23 177.7 31.0 391 26-562 11-404 (417)
81 PRK06814 acylglycerophosphoeth 99.9 1.3E-18 2.8E-23 208.5 38.4 144 55-226 41-188 (1140)
82 TIGR00883 2A0106 metabolite-pr 99.9 1.2E-18 2.5E-23 183.3 32.3 155 51-225 14-183 (394)
83 TIGR00886 2A0108 nitrite extru 99.8 7.5E-19 1.6E-23 183.6 28.4 159 31-217 3-171 (366)
84 TIGR00896 CynX cyanate transpo 99.8 2.7E-18 5.9E-23 179.0 32.2 152 40-221 10-163 (355)
85 TIGR00885 fucP L-fucose:H+ sym 99.8 1.7E-17 3.6E-22 176.3 38.3 166 36-226 9-200 (410)
86 PRK11128 putative 3-phenylprop 99.8 2.6E-17 5.6E-22 173.5 38.7 154 38-224 13-170 (382)
87 TIGR01301 GPH_sucrose GPH fami 99.8 1.2E-16 2.6E-21 170.3 39.9 439 32-563 7-475 (477)
88 PRK11902 ampG muropeptide tran 99.8 1.7E-16 3.7E-21 168.4 41.0 164 36-227 6-176 (402)
89 TIGR00901 2A0125 AmpG-related 99.8 2.9E-17 6.3E-22 171.2 32.3 159 46-230 4-175 (356)
90 TIGR00806 rfc RFC reduced fola 99.8 1.5E-16 3.3E-21 165.4 31.3 175 26-231 23-201 (511)
91 PRK10429 melibiose:sodium symp 99.8 4E-16 8.6E-21 169.1 35.8 149 36-205 13-166 (473)
92 PF06609 TRI12: Fungal trichot 99.8 7.1E-16 1.5E-20 166.6 37.0 152 50-231 64-215 (599)
93 PRK09669 putative symporter Ya 99.8 7.2E-16 1.6E-20 165.8 36.0 170 36-225 16-196 (444)
94 PRK09848 glucuronide transport 99.8 5.3E-16 1.1E-20 167.1 34.3 150 36-204 15-173 (448)
95 PF03825 Nuc_H_symport: Nucleo 99.8 2.6E-15 5.6E-20 158.0 37.3 382 34-562 7-398 (400)
96 TIGR02718 sider_RhtX_FptX side 99.8 6.5E-15 1.4E-19 155.7 37.9 176 31-231 3-182 (390)
97 KOG2504 Monocarboxylate transp 99.8 6.3E-16 1.4E-20 166.7 30.3 433 25-559 40-476 (509)
98 COG0738 FucP Fucose permease [ 99.7 4.1E-15 8.9E-20 149.8 32.2 151 32-207 15-165 (422)
99 KOG0255 Synaptic vesicle trans 99.7 2.5E-15 5.4E-20 165.1 32.8 141 57-228 110-250 (521)
100 PF00083 Sugar_tr: Sugar (and 99.7 5.6E-22 1.2E-26 213.6 -19.6 397 65-572 46-449 (451)
101 PF13347 MFS_2: MFS/sugar tran 99.7 1.3E-15 2.8E-20 163.1 29.6 356 39-519 11-386 (428)
102 TIGR00788 fbt folate/biopterin 99.7 3.9E-15 8.4E-20 160.7 32.7 178 28-231 24-207 (468)
103 PTZ00207 hypothetical protein; 99.7 6.5E-14 1.4E-18 152.5 41.9 176 24-227 23-199 (591)
104 KOG2615 Permease of the major 99.7 1.1E-15 2.3E-20 152.0 25.0 119 60-207 63-181 (451)
105 PRK11462 putative transporter; 99.7 5.1E-14 1.1E-18 151.9 39.7 152 36-207 16-171 (460)
106 PF01306 LacY_symp: LacY proto 99.7 9.2E-15 2E-19 151.4 30.4 391 29-561 7-402 (412)
107 KOG0252 Inorganic phosphate tr 99.7 5E-16 1.1E-20 157.8 16.7 410 62-573 81-511 (538)
108 TIGR00805 oat sodium-independe 99.7 1.9E-15 4.2E-20 168.3 22.4 200 25-231 28-279 (633)
109 KOG2533 Permease of the major 99.7 4.5E-14 9.8E-19 150.9 30.9 148 57-232 73-226 (495)
110 KOG3764 Vesicular amine transp 99.7 4.9E-15 1.1E-19 148.2 21.4 147 59-232 100-246 (464)
111 KOG0253 Synaptic vesicle trans 99.7 4.3E-14 9.3E-19 139.6 27.5 166 36-231 84-249 (528)
112 COG2211 MelB Na+/melibiose sym 99.7 1.9E-13 4E-18 143.1 33.1 369 27-519 10-398 (467)
113 COG2807 CynX Cyanate permease 99.6 1.7E-12 3.8E-17 129.1 34.3 345 32-519 15-361 (395)
114 PF03209 PUCC: PUCC protein; 99.5 3.7E-11 8E-16 122.6 34.0 346 57-519 7-365 (403)
115 PF11700 ATG22: Vacuole efflux 99.5 8.7E-11 1.9E-15 126.2 37.9 360 65-558 70-467 (477)
116 KOG4686 Predicted sugar transp 99.5 2.6E-13 5.7E-18 129.5 14.7 367 49-558 63-442 (459)
117 PRK15011 sugar efflux transpor 99.5 3.1E-12 6.8E-17 135.3 22.3 175 28-231 215-389 (393)
118 KOG2325 Predicted transporter/ 99.5 4.6E-12 1E-16 133.0 21.2 193 19-235 24-231 (488)
119 KOG2563 Permease of the major 99.5 8.7E-12 1.9E-16 127.4 21.8 135 50-207 65-201 (480)
120 PRK10642 proline/glycine betai 99.4 9.8E-12 2.1E-16 135.5 22.2 179 27-231 248-428 (490)
121 TIGR00899 2A0120 sugar efflux 99.4 1.8E-11 3.9E-16 128.2 20.7 163 38-229 208-370 (375)
122 TIGR00890 2A0111 Oxalate/Forma 99.4 7.6E-12 1.7E-16 130.6 17.8 167 32-225 208-374 (377)
123 PRK05122 major facilitator sup 99.4 1.8E-11 3.9E-16 129.7 20.8 165 39-234 226-390 (399)
124 PRK03699 putative transporter; 99.4 1.9E-11 4.1E-16 129.4 20.6 168 30-226 206-373 (394)
125 PRK09556 uhpT sugar phosphate 99.4 1.5E-11 3.2E-16 133.3 20.0 177 29-231 258-447 (467)
126 TIGR00883 2A0106 metabolite-pr 99.4 7.1E-12 1.5E-16 131.6 15.4 167 29-221 219-389 (394)
127 TIGR01299 synapt_SV2 synaptic 99.4 2.6E-11 5.6E-16 136.2 20.6 134 69-231 599-732 (742)
128 PRK09952 shikimate transporter 99.4 6.7E-11 1.5E-15 127.0 21.5 181 27-231 248-431 (438)
129 TIGR00889 2A0110 nucleoside tr 99.3 2.6E-11 5.6E-16 129.4 18.0 176 34-234 213-403 (418)
130 PRK09705 cynX putative cyanate 99.3 1.4E-10 2.9E-15 122.9 22.9 175 29-232 205-380 (393)
131 cd06174 MFS The Major Facilita 99.3 5.5E-11 1.2E-15 122.6 19.5 172 30-229 176-348 (352)
132 PRK09874 drug efflux system pr 99.3 4.4E-11 9.6E-16 126.9 17.7 166 39-232 229-397 (408)
133 TIGR00902 2A0127 phenyl propri 99.3 1.2E-10 2.6E-15 122.7 20.7 168 28-226 204-372 (382)
134 COG2270 Permeases of the major 99.3 1.4E-09 3E-14 111.0 27.1 345 48-519 34-405 (438)
135 COG2271 UhpC Sugar phosphate p 99.3 2.6E-11 5.6E-16 123.3 14.5 180 28-232 251-433 (448)
136 PRK03545 putative arabinose tr 99.3 2.1E-10 4.6E-15 121.2 21.8 172 32-233 208-380 (390)
137 PRK11551 putative 3-hydroxyphe 99.3 7.2E-11 1.6E-15 125.4 18.0 167 35-230 226-393 (406)
138 PRK12382 putative transporter; 99.3 1.2E-10 2.5E-15 123.2 19.3 161 39-230 226-386 (392)
139 TIGR00893 2A0114 d-galactonate 99.3 1.3E-10 2.8E-15 121.8 18.9 176 29-229 215-395 (399)
140 PRK09528 lacY galactoside perm 99.3 5.6E-11 1.2E-15 126.9 16.2 161 43-231 237-401 (420)
141 TIGR00880 2_A_01_02 Multidrug 99.3 2.9E-11 6.2E-16 107.1 10.7 132 72-231 5-136 (141)
142 PRK03633 putative MFS family t 99.3 4.5E-10 9.8E-15 118.3 20.9 154 42-227 213-366 (381)
143 PRK11273 glpT sn-glycerol-3-ph 99.3 2.5E-10 5.4E-15 123.2 19.3 176 29-230 253-432 (452)
144 PRK03893 putative sialic acid 99.2 2.9E-10 6.4E-15 124.0 19.4 148 47-220 293-440 (496)
145 PRK10489 enterobactin exporter 99.2 4E-10 8.6E-15 120.2 19.8 159 45-231 239-397 (417)
146 COG2814 AraJ Arabinose efflux 99.2 6.4E-10 1.4E-14 114.4 20.2 180 26-234 208-387 (394)
147 PRK11663 regulatory protein Uh 99.2 4.4E-10 9.6E-15 120.6 20.1 178 30-232 244-423 (434)
148 TIGR00891 2A0112 putative sial 99.2 2.6E-10 5.5E-15 120.6 17.6 154 36-217 245-400 (405)
149 TIGR00892 2A0113 monocarboxyla 99.2 2.3E-10 5.1E-15 123.4 17.2 171 30-228 242-416 (455)
150 TIGR01272 gluP glucose/galacto 99.2 7.4E-09 1.6E-13 105.7 27.3 80 139-224 9-104 (310)
151 TIGR00897 2A0118 polyol permea 99.2 9E-10 2E-14 116.9 21.3 177 29-231 222-399 (402)
152 COG2223 NarK Nitrate/nitrite t 99.2 4.1E-10 9E-15 114.7 17.2 187 27-235 216-403 (417)
153 TIGR01272 gluP glucose/galacto 99.2 8.1E-10 1.7E-14 112.8 19.3 164 27-221 138-303 (310)
154 PF11700 ATG22: Vacuole efflux 99.2 1.4E-09 3E-14 117.0 21.0 184 28-231 280-466 (477)
155 PRK10406 alpha-ketoglutarate t 99.2 1.3E-09 2.7E-14 117.0 20.7 169 37-231 251-422 (432)
156 PRK15075 citrate-proton sympor 99.2 1E-09 2.3E-14 117.7 19.9 153 35-212 244-398 (434)
157 PRK11010 ampG muropeptide tran 99.2 1.6E-09 3.5E-14 118.0 21.5 176 34-233 227-403 (491)
158 KOG2816 Predicted transporter 99.2 8.9E-09 1.9E-13 109.7 26.5 356 34-519 23-394 (463)
159 PRK11128 putative 3-phenylprop 99.2 2.1E-09 4.5E-14 113.3 20.5 166 29-225 205-371 (382)
160 TIGR00879 SP MFS transporter, 99.2 1.4E-09 3E-14 117.3 19.0 167 49-232 303-469 (481)
161 PF03092 BT1: BT1 family; Int 99.1 1.6E-08 3.5E-13 108.0 26.2 163 50-234 10-176 (433)
162 TIGR00882 2A0105 oligosacchari 99.1 1.5E-09 3.3E-14 114.9 16.5 169 32-228 218-390 (396)
163 KOG3626 Organic anion transpor 99.1 1.5E-08 3.2E-13 111.1 23.3 201 25-236 92-346 (735)
164 TIGR00896 CynX cyanate transpo 99.1 4.9E-09 1.1E-13 109.2 19.0 153 29-210 197-350 (355)
165 TIGR00712 glpT glycerol-3-phos 99.1 2.8E-09 6.1E-14 114.5 17.5 177 30-232 252-432 (438)
166 TIGR00881 2A0104 phosphoglycer 99.1 1.5E-09 3.2E-14 113.4 14.8 161 30-215 217-379 (379)
167 TIGR00900 2A0121 H+ Antiporter 99.1 4.1E-09 8.8E-14 109.5 17.8 155 29-210 210-365 (365)
168 PRK10091 MFS transport protein 99.1 1.1E-08 2.4E-13 107.8 20.7 172 32-231 202-374 (382)
169 TIGR00792 gph sugar (Glycoside 99.1 1.5E-09 3.2E-14 116.4 14.2 162 28-211 221-383 (437)
170 TIGR02332 HpaX 4-hydroxyphenyl 99.1 2.9E-09 6.2E-14 113.5 15.8 164 30-221 243-409 (412)
171 PRK10133 L-fucose transporter; 99.1 5.8E-09 1.3E-13 111.9 18.2 164 32-226 261-426 (438)
172 PRK10504 putative transporter; 99.1 8.5E-09 1.8E-13 111.8 19.6 158 29-211 261-418 (471)
173 TIGR02718 sider_RhtX_FptX side 99.1 6.5E-09 1.4E-13 109.9 18.2 174 31-226 210-384 (390)
174 PRK15034 nitrate/nitrite trans 99.1 1.4E-08 3E-13 108.0 20.5 189 28-234 251-455 (462)
175 KOG4686 Predicted sugar transp 99.0 4.5E-09 9.7E-14 100.9 14.7 171 20-220 255-429 (459)
176 PRK10077 xylE D-xylose transpo 99.0 2.4E-08 5.1E-13 108.5 22.2 155 54-232 295-456 (479)
177 PLN00028 nitrate transmembrane 99.0 5.6E-09 1.2E-13 113.4 16.5 171 32-232 255-432 (476)
178 PRK12307 putative sialic acid 99.0 1.6E-08 3.5E-13 108.1 19.8 147 44-217 246-392 (426)
179 PRK10054 putative transporter; 99.0 8.2E-09 1.8E-13 109.3 17.1 174 29-230 206-381 (395)
180 PF03137 OATP: Organic Anion T 99.0 3.6E-11 7.8E-16 131.0 -1.2 189 37-237 11-254 (539)
181 TIGR00895 2A0115 benzoate tran 99.0 5.9E-09 1.3E-13 109.7 15.3 148 29-205 250-397 (398)
182 PRK15402 multidrug efflux syst 99.0 4.1E-08 8.9E-13 104.3 21.7 171 31-225 217-387 (406)
183 PF05631 DUF791: Protein of un 99.0 7.8E-07 1.7E-11 89.9 28.8 149 58-230 62-213 (354)
184 PF05977 MFS_3: Transmembrane 99.0 3.5E-08 7.5E-13 107.4 20.5 170 32-229 221-390 (524)
185 TIGR00894 2A0114euk Na(+)-depe 99.0 1.9E-08 4E-13 109.0 18.3 178 27-230 259-447 (465)
186 PRK11902 ampG muropeptide tran 99.0 4.9E-08 1.1E-12 103.6 20.8 152 50-229 230-386 (402)
187 PF13347 MFS_2: MFS/sugar tran 99.0 1.9E-08 4.1E-13 107.8 17.6 165 27-212 223-388 (428)
188 PRK10213 nepI ribonucleoside t 99.0 7.1E-08 1.5E-12 102.2 21.7 164 30-223 217-381 (394)
189 TIGR00711 efflux_EmrB drug res 99.0 1.7E-08 3.7E-13 109.7 17.4 155 30-208 256-410 (485)
190 TIGR00710 efflux_Bcr_CflA drug 98.9 5.2E-08 1.1E-12 102.2 19.8 160 32-216 209-369 (385)
191 COG2270 Permeases of the major 98.9 2.4E-08 5.2E-13 102.0 15.4 166 36-229 259-425 (438)
192 PRK14995 methyl viologen resis 98.9 3.3E-08 7.2E-13 107.9 17.8 153 30-207 260-412 (495)
193 PRK11646 multidrug resistance 98.9 5.3E-08 1.2E-12 103.3 18.5 153 48-228 227-383 (400)
194 PRK09848 glucuronide transport 98.9 2.7E-08 5.8E-13 107.3 16.5 164 28-211 227-391 (448)
195 PRK08633 2-acyl-glycerophospho 98.9 4.6E-08 1E-12 117.9 20.1 162 31-220 234-397 (1146)
196 TIGR00887 2A0109 phosphate:H+ 98.9 2.8E-08 6.1E-13 108.7 16.5 165 38-227 297-483 (502)
197 PRK06814 acylglycerophosphoeth 98.8 7E-08 1.5E-12 116.2 18.1 183 29-220 225-409 (1140)
198 TIGR00901 2A0125 AmpG-related 98.8 8.6E-08 1.9E-12 99.8 14.8 144 31-192 211-355 (356)
199 TIGR00903 2A0129 major facilit 98.8 2.8E-07 6E-12 96.6 18.6 166 29-229 192-361 (368)
200 PRK10429 melibiose:sodium symp 98.8 2E-07 4.4E-12 101.2 18.0 166 28-211 230-396 (473)
201 PRK11195 lysophospholipid tran 98.8 5.6E-07 1.2E-11 95.3 20.9 157 42-227 218-374 (393)
202 PRK11102 bicyclomycin/multidru 98.8 2E-07 4.3E-12 97.8 17.1 146 32-202 197-343 (377)
203 TIGR00898 2A0119 cation transp 98.8 1.1E-07 2.4E-12 104.1 15.6 140 59-229 352-491 (505)
204 PRK10473 multidrug efflux syst 98.8 3.2E-07 7E-12 96.9 18.6 143 45-220 219-361 (392)
205 PF07690 MFS_1: Major Facilita 98.7 4.4E-08 9.4E-13 101.3 10.9 141 34-199 211-352 (352)
206 COG2807 CynX Cyanate permease 98.7 8.9E-07 1.9E-11 88.9 19.4 160 30-217 209-369 (395)
207 PRK09669 putative symporter Ya 98.7 3E-07 6.5E-12 99.0 16.3 160 31-211 231-391 (444)
208 TIGR00885 fucP L-fucose:H+ sym 98.7 4.7E-07 1E-11 96.4 17.5 163 30-223 233-402 (410)
209 KOG0569 Permease of the major 98.7 5.3E-07 1.1E-11 95.8 17.1 188 30-237 270-458 (485)
210 PRK11043 putative transporter; 98.7 1.5E-06 3.3E-11 92.1 20.7 146 39-209 213-358 (401)
211 KOG2504 Monocarboxylate transp 98.7 2.3E-07 4.9E-12 100.6 14.0 176 29-233 298-476 (509)
212 PF01306 LacY_symp: LacY proto 98.7 1.7E-06 3.6E-11 90.3 19.5 178 28-233 219-400 (412)
213 KOG3098 Uncharacterized conser 98.6 4.3E-05 9.3E-10 80.8 29.1 103 70-201 55-157 (461)
214 KOG0253 Synaptic vesicle trans 98.6 7.1E-07 1.5E-11 89.2 13.9 143 31-202 328-490 (528)
215 KOG3762 Predicted transporter 98.6 3.5E-06 7.5E-11 88.5 19.2 138 377-559 409-547 (618)
216 PF03825 Nuc_H_symport: Nucleo 98.5 5.4E-06 1.2E-10 87.5 19.7 158 31-212 209-368 (400)
217 TIGR00886 2A0108 nitrite extru 98.5 7.8E-07 1.7E-11 92.8 12.9 139 31-194 227-365 (366)
218 TIGR00880 2_A_01_02 Multidrug 98.5 4.7E-06 1E-10 73.3 15.1 132 383-559 7-138 (141)
219 PRK11652 emrD multidrug resist 98.5 1.3E-05 2.9E-10 84.6 19.9 138 48-211 226-363 (394)
220 PRK15403 multidrug efflux syst 98.4 1.3E-05 2.9E-10 85.4 19.7 138 380-562 57-194 (413)
221 TIGR00924 yjdL_sub1_fam amino 98.4 6.5E-06 1.4E-10 89.4 17.5 187 30-234 273-469 (475)
222 COG2211 MelB Na+/melibiose sym 98.4 1.1E-05 2.4E-10 85.2 18.4 164 28-211 235-399 (467)
223 PRK11462 putative transporter; 98.4 1.3E-05 2.7E-10 86.8 19.3 162 29-211 228-390 (460)
224 COG0738 FucP Fucose permease [ 98.4 9.9E-06 2.1E-10 82.7 16.3 158 28-216 235-392 (422)
225 KOG4332 Predicted sugar transp 98.4 3.3E-05 7.2E-10 74.1 18.7 151 54-230 61-217 (454)
226 PF06813 Nodulin-like: Nodulin 98.4 1.6E-05 3.5E-10 77.7 17.1 159 49-231 21-180 (250)
227 KOG2532 Permease of the major 98.3 9.6E-06 2.1E-10 87.0 15.5 177 29-231 258-445 (466)
228 KOG1330 Sugar transporter/spin 98.3 6.7E-07 1.5E-11 92.4 5.8 145 376-564 70-214 (493)
229 PF03209 PUCC: PUCC protein; 98.3 2.7E-05 5.9E-10 80.1 17.1 169 37-229 216-394 (403)
230 COG0477 ProP Permeases of the 98.3 4.3E-05 9.3E-10 76.1 18.6 146 50-221 23-173 (338)
231 PF01770 Folate_carrier: Reduc 98.3 0.0016 3.4E-08 68.0 30.0 153 50-231 24-180 (412)
232 KOG3764 Vesicular amine transp 98.2 3.2E-06 6.9E-11 85.7 7.9 160 50-231 291-452 (464)
233 PF02487 CLN3: CLN3 protein; 98.2 0.0011 2.4E-08 69.1 26.2 61 454-514 334-394 (402)
234 TIGR00769 AAA ADP/ATP carrier 98.2 0.016 3.6E-07 62.1 36.0 168 27-206 5-189 (472)
235 PRK10207 dipeptide/tripeptide 98.1 5.4E-05 1.2E-09 82.4 15.8 101 389-516 65-168 (489)
236 PF12832 MFS_1_like: MFS_1 lik 98.1 2.1E-05 4.5E-10 62.1 8.5 69 36-106 7-75 (77)
237 TIGR01301 GPH_sucrose GPH fami 98.1 0.00018 3.8E-09 77.4 18.2 202 27-235 256-473 (477)
238 PRK09584 tppB putative tripept 98.1 0.00018 3.9E-09 78.6 18.8 180 36-234 279-480 (500)
239 PRK15462 dipeptide/tripeptide 98.0 0.00017 3.6E-09 78.0 17.0 129 386-558 57-188 (493)
240 PTZ00207 hypothetical protein; 98.0 0.00035 7.7E-09 76.9 19.5 125 399-560 82-206 (591)
241 KOG0637 Sucrose transporter an 98.0 0.00039 8.4E-09 72.2 18.2 170 26-205 29-202 (498)
242 TIGR00788 fbt folate/biopterin 98.0 3.6E-05 7.8E-10 83.4 11.0 136 57-210 280-415 (468)
243 PF06963 FPN1: Ferroportin1 (F 97.9 0.043 9.3E-07 58.3 35.7 186 32-228 5-195 (432)
244 KOG2615 Permease of the major 97.9 5.7E-05 1.2E-09 76.4 10.2 112 376-516 70-181 (451)
245 TIGR00806 rfc RFC reduced fola 97.9 0.00061 1.3E-08 72.2 17.6 103 384-515 72-174 (511)
246 TIGR00805 oat sodium-independe 97.9 0.00012 2.7E-09 82.1 13.1 131 376-517 70-234 (633)
247 KOG2533 Permease of the major 97.8 0.00012 2.5E-09 79.0 11.1 85 31-115 275-363 (495)
248 KOG0254 Predicted transporter 97.8 0.00079 1.7E-08 73.9 17.0 149 25-190 290-439 (513)
249 PF00083 Sugar_tr: Sugar (and 97.8 1.5E-07 3.2E-12 101.5 -12.3 185 29-235 252-438 (451)
250 KOG3762 Predicted transporter 97.8 0.00011 2.5E-09 77.4 9.5 168 36-232 378-546 (618)
251 KOG0252 Inorganic phosphate tr 97.7 8E-05 1.7E-09 77.1 6.7 179 29-231 304-496 (538)
252 PF06609 TRI12: Fungal trichot 97.6 0.0032 6.9E-08 69.2 19.0 137 376-558 80-216 (599)
253 KOG2325 Predicted transporter/ 97.4 0.003 6.4E-08 67.3 14.8 160 377-563 74-233 (488)
254 KOG0255 Synaptic vesicle trans 97.4 0.002 4.3E-08 70.9 13.1 127 380-554 124-250 (521)
255 PF05978 UNC-93: Ion channel r 97.2 0.016 3.4E-07 52.5 14.5 114 62-204 34-147 (156)
256 PRK03612 spermidine synthase; 97.2 0.052 1.1E-06 59.5 21.1 168 34-225 19-190 (521)
257 KOG3574 Acetyl-CoA transporter 97.0 0.58 1.3E-05 48.1 24.3 61 457-517 371-431 (510)
258 PF06779 DUF1228: Protein of u 96.9 0.0082 1.8E-07 47.9 8.5 67 50-117 12-78 (85)
259 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.6 1.3E-05 52.6 24.3 315 60-439 15-339 (654)
260 PF06813 Nodulin-like: Nodulin 96.5 0.16 3.4E-06 49.8 16.6 92 413-515 64-155 (250)
261 KOG2816 Predicted transporter 96.3 0.044 9.4E-07 58.9 12.5 128 51-207 263-391 (463)
262 COG3104 PTR2 Dipeptide/tripept 96.1 0.054 1.2E-06 57.5 11.6 122 413-566 90-213 (498)
263 KOG2563 Permease of the major 96.1 0.041 8.8E-07 57.5 10.4 128 59-210 295-423 (480)
264 KOG0637 Sucrose transporter an 95.8 0.054 1.2E-06 56.7 9.5 168 332-512 32-200 (498)
265 PF03137 OATP: Organic Anion T 95.6 0.0025 5.5E-08 69.9 -0.8 169 377-564 41-255 (539)
266 KOG3626 Organic anion transpor 95.2 0.12 2.6E-06 57.7 10.7 170 376-564 134-348 (735)
267 PF00854 PTR2: POT family; In 94.8 0.21 4.7E-06 52.2 10.9 124 417-565 3-129 (372)
268 PF03092 BT1: BT1 family; Int 94.7 0.28 6E-06 52.6 11.5 118 413-561 57-177 (433)
269 PF05631 DUF791: Protein of un 94.2 6.6 0.00014 40.4 19.3 98 393-515 84-187 (354)
270 PF05978 UNC-93: Ion channel r 94.0 1.7 3.7E-05 39.3 13.2 84 414-515 66-149 (156)
271 KOG3810 Micronutrient transpor 93.8 1.9 4.2E-05 43.9 14.2 94 454-558 325-420 (433)
272 PF06963 FPN1: Ferroportin1 (F 93.4 3.1 6.7E-05 44.4 15.9 134 50-202 279-412 (432)
273 PF03219 TLC: TLC ATP/ADP tran 91.5 24 0.00051 38.4 32.2 168 27-207 22-205 (491)
274 TIGR00769 AAA ADP/ATP carrier 90.1 31 0.00067 37.3 19.3 56 461-516 134-190 (472)
275 COG3202 ATP/ADP translocase [E 89.5 34 0.00073 36.8 33.1 165 27-207 25-209 (509)
276 KOG3098 Uncharacterized conser 89.1 27 0.00058 37.5 17.6 128 59-198 272-404 (461)
277 PF02487 CLN3: CLN3 protein; 88.8 6.3 0.00014 41.4 12.5 61 139-205 334-394 (402)
278 KOG3880 Predicted small molecu 88.3 5.7 0.00012 39.9 10.9 58 454-511 341-398 (409)
279 PF01770 Folate_carrier: Reduc 85.1 36 0.00078 36.0 15.6 82 417-516 73-154 (412)
280 PF07672 MFS_Mycoplasma: Mycop 84.5 30 0.00066 34.0 13.6 52 184-237 8-66 (267)
281 KOG4332 Predicted sugar transp 83.9 11 0.00025 37.0 10.3 139 65-225 282-423 (454)
282 PF13000 Acatn: Acetyl-coenzym 83.3 8.8 0.00019 41.3 10.1 41 472-512 135-175 (544)
283 TIGR00939 2a57 Equilibrative N 81.9 10 0.00023 40.6 10.4 114 66-201 308-427 (437)
284 PF07857 DUF1632: CEO family ( 80.5 9.2 0.0002 37.5 8.6 29 486-514 74-102 (254)
285 COG0477 ProP Permeases of the 80.1 21 0.00046 34.5 11.5 62 455-516 94-157 (338)
286 PRK03612 spermidine synthase; 79.6 90 0.0019 34.3 17.0 52 464-516 119-170 (521)
287 KOG3574 Acetyl-CoA transporter 72.0 67 0.0014 33.6 12.1 48 462-509 140-187 (510)
288 COG5336 Uncharacterized protei 71.9 11 0.00024 31.2 5.4 45 71-115 48-92 (116)
289 TIGR00939 2a57 Equilibrative N 71.0 1.5E+02 0.0033 31.7 30.2 59 454-512 371-429 (437)
290 KOG3097 Predicted membrane pro 69.8 70 0.0015 32.7 11.5 104 37-169 36-139 (390)
291 KOG1479 Nucleoside transporter 68.5 15 0.00034 38.4 7.1 113 43-172 257-375 (406)
292 KOG4830 Predicted sugar transp 67.4 9.8 0.00021 37.2 4.9 76 21-99 10-94 (412)
293 PF03219 TLC: TLC ATP/ADP tran 63.9 2.2E+02 0.0049 31.0 19.7 43 474-516 163-205 (491)
294 KOG1479 Nucleoside transporter 62.0 2.2E+02 0.0047 30.1 28.0 58 454-511 342-399 (406)
295 PF09527 ATPase_gene1: Putativ 60.6 31 0.00068 24.8 5.5 40 72-111 7-46 (55)
296 KOG2601 Iron transporter [Inor 54.1 2.9E+02 0.0062 29.1 18.7 73 32-105 30-102 (503)
297 PF01733 Nucleoside_tran: Nucl 49.7 5.5 0.00012 40.5 0.0 111 70-201 187-303 (309)
298 TIGR02230 ATPase_gene1 F0F1-AT 46.3 54 0.0012 27.1 5.3 33 76-108 53-85 (100)
299 PF01891 CbiM: Cobalt uptake s 43.9 2.8E+02 0.0061 26.1 11.1 31 456-486 174-204 (205)
300 PF06912 DUF1275: Protein of u 43.3 2.9E+02 0.0062 26.0 16.6 48 67-115 48-98 (209)
301 COG5336 Uncharacterized protei 35.2 2E+02 0.0044 24.1 6.8 35 484-518 35-69 (116)
302 KOG1237 H+/oligopeptide sympor 33.8 1.2E+02 0.0025 33.9 7.2 67 137-209 455-521 (571)
303 PF12670 DUF3792: Protein of u 32.5 3.1E+02 0.0067 23.2 11.4 69 28-104 4-72 (116)
304 TIGR01667 YCCS_YHJK integral m 31.2 4.9E+02 0.011 29.8 11.8 47 90-156 51-97 (701)
305 COG3619 Predicted membrane pro 30.7 5E+02 0.011 25.0 17.2 63 32-95 15-84 (226)
306 TIGR01666 YCCS hypothetical me 29.9 5.8E+02 0.013 29.3 12.0 47 90-156 51-97 (704)
307 PF13000 Acatn: Acetyl-coenzym 28.7 8.1E+02 0.018 26.9 13.5 64 142-211 407-470 (544)
308 KOG4112 Signal peptidase subun 26.4 1.7E+02 0.0036 23.7 4.9 26 186-212 27-52 (101)
309 PF12273 RCR: Chitin synthesis 26.2 44 0.00096 29.0 1.9 19 212-230 1-19 (130)
310 PRK11588 hypothetical protein; 25.1 9.3E+02 0.02 26.4 12.5 38 394-436 132-169 (506)
311 PRK11469 hypothetical protein; 23.9 5.9E+02 0.013 23.7 9.8 78 27-113 104-182 (188)
312 PF12832 MFS_1_like: MFS_1 lik 22.5 2.7E+02 0.0058 21.6 5.5 28 377-408 38-65 (77)
313 PF12805 FUSC-like: FUSC-like 22.3 7.2E+02 0.016 24.6 10.1 18 139-156 22-39 (284)
314 PF03606 DcuC: C4-dicarboxylat 21.4 8E+02 0.017 26.5 10.8 8 401-408 107-114 (465)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=374.66 Aligned_cols=529 Identities=40% Similarity=0.692 Sum_probs=467.4
Q ss_pred CCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHH
Q 045410 24 PKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGS 103 (589)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 103 (589)
....|++..++++.+.++++++|++..++..|++..++.+..++...++.+.......++++++++|-|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCC----CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchh
Q 045410 104 IASFLGMGIMTLTASIPKLRPPDC----TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQ 179 (589)
Q Consensus 104 ~~~~~~~~~~~~~~s~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 179 (589)
++..+|.+++.+...+|.+.++.| ++..|..........++.++-+.++|.|+..|+..++.+|+|++..+..+..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999998888888776654 1223444455566788999999999999999999999999999766666667
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhc
Q 045410 180 LESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRK 259 (589)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (589)
+.+.|+|+|+..++|..++..+..++.++.+|.+.|.++.+...+++++++...+.++..+|.++++..+.+++..++++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 77999999999999999999999999999999999999999999999999999998988889999999999999999999
Q ss_pred cccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHH
Q 045410 260 RKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFP 339 (589)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 339 (589)
++...+.+++.. . .........+++++.++++.+++....+. .++...++|+.|+.+.+++.|.+++.++
T Consensus 272 ~~~~~~~~~~~~-~-------~~~~~~~~~~~t~~f~~l~kaa~~~~~~~--~~~~~~~~w~lct~~~Vee~K~~lr~~P 341 (571)
T KOG1237|consen 272 RKAVVSLDPEEL-Y-------YDCTDSVAIEGTKPFRFLDKAALKTSDDL--KDGLDANPWRLCTVTQVEEVKAVLRLLP 341 (571)
T ss_pred HhccCCCcchhc-c-------ccccccccccCCcccchhhHhhccCCccc--ccccccCCccCCCceehhhhhhhhhhhH
Confidence 887666553221 0 11122234455778899999988876553 4455678899999999999999999999
Q ss_pred HHHHHHHHHHhhhcchhhHHhhhhhcccccCc-ccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHH
Q 045410 340 VWITGIFCFLAMDQQNTIGILQAIQTNKRFGS-FNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRI 418 (589)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i 418 (589)
.+...+++++.+.|+.+.+..|...++...++ ++++++.+..+..+..++..|+.+++..|+.+|+.+++++.+.+.++
T Consensus 342 i~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqri 421 (571)
T KOG1237|consen 342 IWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRI 421 (571)
T ss_pred HHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhhee
Confidence 99999999999999999999999999999988 99999999999999999999999999999999999887778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHH
Q 045410 419 TIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFL 498 (589)
Q Consensus 419 ~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 498 (589)
.+|+++..+++...+..+.+|.+.+.......+++|.+|.+|.++++|+++.+..+...++..+++|++||+.+++++.+
T Consensus 422 g~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 422 GIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred eccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 99999999999999999999888875522234589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 045410 499 SLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVS 564 (589)
Q Consensus 499 ~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~ 564 (589)
..++|+.++..++..+...++. ..+|+.++++|.++.+++|++++....+..+.+..+.++.+.
T Consensus 502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~ 565 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDY 565 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeee
Confidence 9999999999999988766533 448998789999999999999999999999888877666543
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=347.53 Aligned_cols=460 Identities=17% Similarity=0.264 Sum_probs=350.2
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcC----CchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYN----MDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLL 100 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg----~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~ 100 (589)
.+++|.++.++.+|++|||+|||+...+..|+..+++ +|++++..+.+.|....++.++++||++||++|+||+++
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 4689999999999999999999999999999998877 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhh
Q 045410 101 YGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQL 180 (589)
Q Consensus 101 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 180 (589)
.|.+++.+|+++++... . .+...++++.+++++|.|.++|++.++++|++|++++|++
T Consensus 97 lGail~~iGh~~L~~~~-~------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD--- 154 (498)
T COG3104 97 LGAILMAIGHLVLAISS-V------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD--- 154 (498)
T ss_pred HHHHHHHHHHHHHhccc-c------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC---
Confidence 99999999999999863 0 1345699999999999999999999999999999987755
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCC--CChH--HHHH----HH
Q 045410 181 ESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQ--GSVF--VDMA----KV 252 (589)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~--~~~~----~~ 252 (589)
.+++++|+++|+|+.++|++.+++.+++||+..|.++++.+.++++.++..+++....... ..+. .... ..
T Consensus 155 -~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (498)
T COG3104 155 -GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGL 233 (498)
T ss_pred -CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHH
Confidence 5799999999999999999999999999999999999999999999988887765543321 1111 1111 11
Q ss_pred HHHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCC--CCCCCcccchhhhHHH
Q 045410 253 ITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDG--KAKNGWRLCSLLQVEQ 330 (589)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 330 (589)
+...+... . + .. -....++.......... ..+ .....| .+.. .+
T Consensus 234 ~~~~~~~~-~----------~--------------~~---l~~~~~~~~~~~~~i~~--~~~~~~~~~~~---~~~~-~e 279 (498)
T COG3104 234 VVMILAAL-L----------T--------------LL---LNQNTFSGVLLVISILI--AIIYFAEAFRS---PKVF-DE 279 (498)
T ss_pred HHHHHHHH-H----------H--------------HH---HHHHHHHHHHHHHHHHH--HHHHHHHHhcc---CccH-HH
Confidence 10000000 0 0 00 00000000000000000 000 000111 1112 67
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhcchhhHHhhh-hhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCC
Q 045410 331 LKLLVAMFPVWITGIFCFLAMDQQNTIGILQA-IQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKK 409 (589)
Q Consensus 331 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~ 409 (589)
+|+++..+++++...+||++++|.++....+. +..+.+..++++++++.+.+|++.++++.|+++++..++.++.
T Consensus 280 r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~---- 355 (498)
T COG3104 280 RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN---- 355 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC----
Confidence 88999999999999999999999999555554 5556665679999999999999999999999999976665554
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhh
Q 045410 410 IRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMR 489 (589)
Q Consensus 410 ~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r 489 (589)
+.++...++.+|+++++.+++++....... + ++....|.+|+++.++++++||.+.+|...+++++.+|+++.
T Consensus 356 ~~ps~~~KFalGl~l~g~~fl~l~~~~~~~---~----~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~ 428 (498)
T COG3104 356 KQPSTPIKFALGLILAGLGFLILLLAGIWF---G----GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALK 428 (498)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHhh---c----CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHH
Confidence 235888999999999999999988774211 1 123367899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 045410 490 TVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFV 563 (589)
Q Consensus 490 g~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~ 563 (589)
+..+|+|.+....++.++..+.+...+ +. ...+......+|..++++..+..+..+...++.+
T Consensus 429 s~~ma~wfLt~a~~~~l~g~va~~~~~-~~----------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 429 SFIMAMWFLTVAAGQTLGGQVAGLTAV-TD----------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred HHHHHHHHHHHHHHHHhhceecccccc-cc----------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999998888763221 00 0111123345677888877777777666655543
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.7e-36 Score=327.71 Aligned_cols=455 Identities=12% Similarity=0.163 Sum_probs=329.4
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
++||.++.+++++++|+++||++.++++.|+++++|++.++++++.+.+....++.++++|+++||++||||+++++.++
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999945999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
+.++++.++++.+ ....++++|+++++|.|.+.|+..++++|+||++++ +|.+.++
T Consensus 91 ~~~g~~~~~~~~~--------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~~~~ 146 (489)
T PRK10207 91 LAIGYFMTGMSLL--------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDGAFT 146 (489)
T ss_pred HHHHHHHHHHhcc--------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhcchh
Confidence 9999999998651 123466889999999999999999999999987542 3456799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhcccccc--CCCCChHHHHHHHHH-------HH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIK--NPQGSVFVDMAKVIT-------AS 256 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~ 256 (589)
++|++.|+|..+||.+++++.++.|||+.|+++.+..+++++.+...++++++. +|++++. +...... ..
T Consensus 147 ~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~l~~~~~~~~~ 225 (489)
T PRK10207 147 LFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPM-SFSKLLLVLLGSVVMI 225 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccch-hhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999997766555555555554443332 2222211 1111100 00
Q ss_pred HhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhh------hhhhcCCccccCCCCCCCcccchhhhHHH
Q 045410 257 CRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKA------AVIVDSSELDDDGKAKNGWRLCSLLQVEQ 330 (589)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (589)
..-... .+. .......+... ....... . ....+
T Consensus 226 ~~~~~~--~~~-----------------------~~~~~~~~~~~~~i~~~~f~~~~~---------------~-~~~~~ 264 (489)
T PRK10207 226 FVCAWL--MHN-----------------------VEVANLVLIVLSIVVTIIFFREAF---------------K-LDKTG 264 (489)
T ss_pred HHHHHH--Hhh-----------------------hhHHHHHHHHHHHHHHHHHHHHHh---------------c-CCHHH
Confidence 000000 000 00000000000 0000000 0 01123
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhcchhhHHhhh-hhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCC
Q 045410 331 LKLLVAMFPVWITGIFCFLAMDQQNTIGILQA-IQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKK 409 (589)
Q Consensus 331 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~ 409 (589)
+++.+..+.++....++|..+.|.......+. ...+....++..+++++.++|++..++..|+.+++ .+|+++|+
T Consensus 265 r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l----~~rl~~r~ 340 (489)
T PRK10207 265 RNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGI----YTHLGSKG 340 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHH----HHHHhhCC
Confidence 44566666667778889999999866443333 35666666788888999999999999999997665 67777666
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhh
Q 045410 410 IRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMR 489 (589)
Q Consensus 410 ~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r 489 (589)
.+.++..++.+|+++.+++++.+....... ...+ ...+.+++++.+++.++||.+..|..++++.+.+|++++
T Consensus 341 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~~----~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 341 KDLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADAQ----GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCCC----CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 667899999999999999987664432100 0011 145678889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 045410 490 TVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVS 564 (589)
Q Consensus 490 g~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~ 564 (589)
|.++|++++..++|+.++..+...+.... ...++. .....+.++|..++++.++..++++.+.+..++
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~~~~~--~~~~~~-----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 481 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFTAVPD--NITDPL-----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNR 481 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccccch-----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887553100 000010 011236678888888888777777776665544
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=9.2e-36 Score=317.36 Aligned_cols=447 Identities=16% Similarity=0.194 Sum_probs=322.8
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
+++|.++.++++++++++++|++..+++.|+++.+|+++.+++.+.+.+....+++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999944999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..+++++++.... +...++++..+..+|.|...++..++++|+||++++ +|.++++
T Consensus 86 ~~lg~lll~~~~~--------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~ 141 (493)
T PRK15462 86 MAIGHVVLGASEI--------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFS 141 (493)
T ss_pred HHHHHHHHHHhhc--------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceeh
Confidence 9999887765320 123355556667788888999999999999987542 3667899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhcccccc---CCCCChHHHHHHHH-----HHH-
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIK---NPQGSVFVDMAKVI-----TAS- 256 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~- 256 (589)
++|...|+|+.++|.+++++.+.+||++.|.++++.++++++.+...++++.+. ++++.+.++..... ...
T Consensus 142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (493)
T PRK15462 142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLV 221 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998777666666665555443322 11111101100000 000
Q ss_pred ----HhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHH
Q 045410 257 ----CRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLK 332 (589)
Q Consensus 257 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (589)
...... .+......+....+..-. ...+......+.++++
T Consensus 222 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~er~ 265 (493)
T PRK15462 222 ATPALITVLF---------------------------WKEWSVYALIVATIIGLG---------VLAKIYRKAENQKQRK 265 (493)
T ss_pred HHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHH---------HHHHHHHhcCCHHHHh
Confidence 000000 000000000000000000 0000000001235678
Q ss_pred HHHhHHHHHHHHHHHHHhhhcchh-hHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCC
Q 045410 333 LLVAMFPVWITGIFCFLAMDQQNT-IGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIR 411 (589)
Q Consensus 333 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~ 411 (589)
++...+.+++..++||..+.|.++ ...+...++|.+++++++++++++++|++.++++.|++.++ ..|+.+|++.
T Consensus 266 r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~l----w~~l~~~~~~ 341 (493)
T PRK15462 266 ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWV----VKESVAGNRT 341 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHH----HHHHhcCCCC
Confidence 888999999999999999999998 66666688899999999999999999999999999998887 4454333334
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHH
Q 045410 412 LTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTV 491 (589)
Q Consensus 412 ~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~ 491 (589)
.+...++.+|+++++++++++.+.... ...++ ..+.+|++..++++++||.+..|...+++.+.+|++.||+
T Consensus 342 ~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~~~----~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~ 413 (493)
T PRK15462 342 VRIWGKFALGLGLMSAGFCILTLSARW----SAMYG----HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGV 413 (493)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhh----cCCCC----CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHH
Confidence 688999999999999999988775421 11111 4688899999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHhhhccccccCCCCCCCCC--CCcchhHHHHHHHHHHHHHH
Q 045410 492 SGAVFFLSL-SISSYINSALVNIIHGLTKKYAKAPWLGGTD--LNKDTLDYFYFTIAALEVVN 551 (589)
Q Consensus 492 ~~g~~~~~~-~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~--~~~~~~~~~f~~~a~~~~~~ 551 (589)
.+|++.+.. .+|+.+++.+.......... +- .+ .+...|..+|..++.+.++.
T Consensus 414 ~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~----~~---~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 414 LTGIYMLLSGAIANYLAGVIADQTSQASFD----AS---GAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCC----cc---ccccchhhhHHHHHHHHHHHHHHH
Confidence 999998754 68888888777755321100 00 00 01224566777777666555
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=1.3e-35 Score=320.42 Aligned_cols=453 Identities=13% Similarity=0.149 Sum_probs=328.2
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHh--cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTK--YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYG 102 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~ 102 (589)
.+++|.++.++..++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++||||+++++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 45778888899999999999999999999999987 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhh
Q 045410 103 SIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLES 182 (589)
Q Consensus 103 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (589)
.++.+++.++++++. +.+.++++|++.|+|.|...|+..++++|++|++++ .+|.+
T Consensus 86 ~~~~~~g~~~~~~~~---------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r~~ 141 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI---------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRRDG 141 (475)
T ss_pred HHHHHHHHHHHHhcc---------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---ccccc
Confidence 999999999888865 556788899999999999999999999999986542 23667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHH-----HH--H---
Q 045410 183 FFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDM-----AK--V--- 252 (589)
Q Consensus 183 ~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~--- 252 (589)
+++++|++.|+|..+||.+++++.+++||++.|.++++..+++++.+...++.+++.++++++..+. .+ .
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLA 221 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHH
Confidence 8999999999999999999999999899999999988766666555555444433222221111000 00 0
Q ss_pred -HHHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHH
Q 045410 253 -ITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQL 331 (589)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (589)
+...++..... .+.. . .+ ...+............ .. .++. .+. .+.
T Consensus 222 ~~~~~~~~~~~~-~~~~-----~--------~~--------~~~~~~~~~~~~~~~~---~~---~~~~----~~~-~~~ 268 (475)
T TIGR00924 222 ALALVFFCAWLM-HHVV-----I--------AN--------ILLMTVTLAVIIFFFR---LA---FKPR----LDA-VAR 268 (475)
T ss_pred HHHHHHHHHHHH-hccH-----H--------HH--------HHHHHHHHHHHHHHHH---HH---Hhcc----CCH-HHH
Confidence 00000000000 0000 0 00 0000000000000000 00 0000 011 223
Q ss_pred HHHHhHHHHHHHHHHHHHhhhcchh-hHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCC
Q 045410 332 KLLVAMFPVWITGIFCFLAMDQQNT-IGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKI 410 (589)
Q Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~ 410 (589)
++....+++++...++|..+.|..+ ...++...++.+.++++++++++.++|++.+++..|+.+++ ..|+.+|++
T Consensus 269 ~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~----~~~l~~~~~ 344 (475)
T TIGR00924 269 NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMI----WTRLGRKGK 344 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHH----HHHHHhCCC
Confidence 3445567788889999999999888 45555566777777788999999999999999999997765 444444433
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhH
Q 045410 411 RLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRT 490 (589)
Q Consensus 411 ~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 490 (589)
+.+...++.+|+++.+++++..++... .. +.....+.+|+++.+++.++||.+..|..++++.+.+|++.||
T Consensus 345 ~~~~~~k~~~G~~l~~~~~~~~~~~~~----~~----~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g 416 (475)
T TIGR00924 345 DPTTPLKFTLGMLFCGASFLTFAASIW----FA----DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMG 416 (475)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHh----hc----CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHH
Confidence 457777899999999999988876521 11 1112568899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 045410 491 VSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFV 563 (589)
Q Consensus 491 ~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~ 563 (589)
+++|++.+...+|+.+++.+.....+.. + ...+|..++++.++..++++...+..+
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~~~~~------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFGAVPQ------G-----------VTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc------c-----------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887664321 1 234566777777777676666655443
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=3.1e-34 Score=311.55 Aligned_cols=458 Identities=15% Similarity=0.215 Sum_probs=325.1
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
.+++|.++.+++.++++++++|++.++++.|+++++|++.++.+++.+.+....+..++++|+++||++|||++++++.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999998888888888999999993399999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
++.+++.+++++.. +.+.++++|+++|+|.|...++..++++|+||+++ ++|...+
T Consensus 97 ~~~ig~~l~~~~~~--------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~----~~~~~~~ 152 (500)
T PRK09584 97 VLAIGYALVAWSGH--------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD----PRLDGAF 152 (500)
T ss_pred HHHHHHHHHHHhcc--------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc----hhhhhcc
Confidence 99999888887530 34557788999999999999999999999998643 2344578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhcccccc--CCCCChHH--HHH----HHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIK--NPQGSVFV--DMA----KVITAS 256 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~--~~~----~~~~~~ 256 (589)
+++|++.++|+.+||.+++++.+++|||+.|.+.++..+++++.++...+..++. +|++++.+ ... ......
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALI 232 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998876666655554444333322 22222111 110 000000
Q ss_pred Hhcccc-ccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHH
Q 045410 257 CRKRKV-NLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLV 335 (589)
Q Consensus 257 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 335 (589)
...... ..++.. ..............- +.........+.++++
T Consensus 233 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 276 (500)
T PRK09584 233 AIATWLLHNQEIA-----------------------RMALGVVALGIVVIF-------------GKEAFAMKGAARRKMI 276 (500)
T ss_pred HHHHHHHhcchHH-----------------------HHHHHHHHHHHHHHH-------------HHHHhhcCHHHHHHHH
Confidence 000000 000000 000000000000000 0000001223456666
Q ss_pred hHHHHHHHHHHHHHhhhcchhhHHhhh-hhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCc
Q 045410 336 AMFPVWITGIFCFLAMDQQNTIGILQA-IQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTM 414 (589)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~ 414 (589)
..+.+++..+++|+.+.|.+.....+. ...+....++..+++++.++|++.+++..|+.++. .+|+++| .+.
T Consensus 277 ~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~----~~~l~~r---~~~ 349 (500)
T PRK09584 277 VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAI----YNKMGDR---LPM 349 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHH----HHHhCcC---CCc
Confidence 667778888999999999998666554 33555666778889999999999999999998776 4555444 367
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHH
Q 045410 415 RQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGA 494 (589)
Q Consensus 415 ~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 494 (589)
..++.+|+++++++++.+.+.... .+.+ ...+.+|+++.+++.++||++..|...+++.+.+|+++||+++|
T Consensus 350 ~~~~~~G~~l~~l~f~~l~~~~~~----~~~~----~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g 421 (500)
T PRK09584 350 PHKFAIGMVLCSGAFLVLPLGAKF----ANDA----GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMG 421 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----cCCC----CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHH
Confidence 789999999999999988776421 1111 24677789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 045410 495 VFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVS 564 (589)
Q Consensus 495 ~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~ 564 (589)
++.+...+|+.+++.+...+... +-..+.....+.+.++|...+.++++..++++...+..++
T Consensus 422 ~~~l~~a~g~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 422 SWFLTTAGAALIAGYVANLMAVP-------DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-------cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888887644210 0000000111236678888888777666666666555443
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.95 E-value=1e-25 Score=248.19 Aligned_cols=336 Identities=26% Similarity=0.448 Sum_probs=273.0
Q ss_pred HhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 045410 43 LASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKL 122 (589)
Q Consensus 43 ~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~ 122 (589)
++||++.+.+..|+.+.+|++++++..+...+....++.++++|+++|+++||++.+.++.++..+|..++++.. .|..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999988754 2321
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 045410 123 RPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAV 202 (589)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 202 (589)
.. ......++++.++.++|.|++.|+..+..+|++++++ ++.|.++|+++|+++|+|+.+++++.
T Consensus 80 ~~------------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i~ 144 (654)
T TIGR00926 80 GH------------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTIIT 144 (654)
T ss_pred cc------------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 1134457788899999999999999999999997532 24578899999999999999999999
Q ss_pred HHHHhhc-------chhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCC
Q 045410 203 VYIQTNV-------SWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDP 275 (589)
Q Consensus 203 ~~l~~~~-------g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (589)
+++.+.+ +|+..|.+++++++++++++...++++++.+|.+++..+..+++..+.++++.....+
T Consensus 145 ~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~-------- 216 (654)
T TIGR00926 145 PILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH-------- 216 (654)
T ss_pred HHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc--------
Confidence 9998543 6999999999999999988888888877777777777777777766666543211100
Q ss_pred CCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcch
Q 045410 276 PLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQN 355 (589)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 355 (589)
...+|++.+.... ..+.+++.|++++++++++...++|..+.|..
T Consensus 217 -----------------~~~~~ld~a~~~~------------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~ 261 (654)
T TIGR00926 217 -----------------WPLHWLDYAKDKH------------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQG 261 (654)
T ss_pred -----------------cchhHHHHhcccc------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 0122333221100 12356788999999999999999999999999
Q ss_pred hhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 045410 356 TIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFV 435 (589)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~ 435 (589)
+.+..|...++.+++++..+++++..+|++.++++.|+++..+.|..+|.+. +.++..++.+|++++++++++..+.
T Consensus 262 s~~~~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~v 338 (654)
T TIGR00926 262 SRWTLQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAALV 338 (654)
T ss_pred hHHHHHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888888877777888999999999999999999998777777766543 2588999999999999999999988
Q ss_pred HHHHh
Q 045410 436 ERKRR 440 (589)
Q Consensus 436 ~~~~~ 440 (589)
+....
T Consensus 339 e~~~~ 343 (654)
T TIGR00926 339 QLKVN 343 (654)
T ss_pred HHHHh
Confidence 75543
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.95 E-value=3.9e-24 Score=226.06 Aligned_cols=374 Identities=12% Similarity=0.075 Sum_probs=240.2
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+|...+.+....++.....|. ...+.+.+.+++|.++.+.+++.+.+.++..++.++.|+++|| +||||++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFV-PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHH-HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHH
Confidence 455555555555554444443 3334456778999999999999999999999999999999999 59999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+.+.+++ +.+.++++|+++|++.+...+...+++.|.+|+ ++|++.+++
T Consensus 85 ~~~~~~~~~~~---------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~------~~r~~~~g~ 137 (390)
T PRK03545 85 IASHVLSALAW---------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA------GKKAQALSL 137 (390)
T ss_pred HHHHHHHHHhc---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------hhhhhHHHH
Confidence 99999998877 788899999999999999899999999999986 357788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCC
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQ 266 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (589)
+..+.++|..++|.+++.+.+.+|||+.|++.+++.++..+..+...|+.+++ ++++.++ .
T Consensus 138 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~----~------------- 198 (390)
T PRK03545 138 LATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLKS----L------------- 198 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHHH----H-------------
Confidence 99999999999999999999989999999987766554443333322211100 0000000 0
Q ss_pred CCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHH
Q 045410 267 ASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIF 346 (589)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 346 (589)
.. ..++.+........+.....
T Consensus 199 ----------------------------------~~------------------------~~~~~~~~~~~~~~~~~~~~ 220 (390)
T PRK03545 199 ----------------------------------PL------------------------LFRRPALVSLYLLTVVVVTA 220 (390)
T ss_pred ----------------------------------HH------------------------HHhCcHHHHHHHHHHHHHHH
Confidence 00 00000000011111111111
Q ss_pred HHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHH
Q 045410 347 CFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAI 426 (589)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~ 426 (589)
.+....... .+.....+.+.. ..+.......+..+++..+.+++ .+|.++| .+..+..+..
T Consensus 221 ~~~~~~~~~-~~l~~~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~l----~dr~~~~--------~~~~~~~~~~ 281 (390)
T PRK03545 221 HFTAYSYIE-PFVQQVAGLSEN------FATLLLLLFGGAGIIGSVLFSRL----GNRHPSG--------FLLIAIALLL 281 (390)
T ss_pred HHHHHHHHH-HHHHHhcCCCcc------HHHHHHHHHHHHHHHHHHHHHHH----hhccchh--------HHHHHHHHHH
Confidence 111111111 111111122211 12222233333444444443333 5554322 3445555555
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHH
Q 045410 427 LSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYI 506 (589)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 506 (589)
++....... ..+.+.+++..++.|++.....+.....+.+..| +.|+.++|+++....+|..+
T Consensus 282 ~~~~~l~~~----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 282 VCLLLLLPA----------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred HHHHHHHHH----------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH
Confidence 554433222 1133445556677788877777777788888877 57899999999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 507 NSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 507 ~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
|+.+.|.+.|.. ++...|++.+.+.++++++++...
T Consensus 345 G~~~~G~~~~~~-----------------g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 345 GALLGNQVSLHL-----------------GLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHhcc-----------------ChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999887632 234577788888888877776664
No 9
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=4.8e-24 Score=225.96 Aligned_cols=378 Identities=14% Similarity=0.068 Sum_probs=245.7
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
.+.+|.+..+....++..++.....+.++.|+.+++|.|+.+.+++.+++.++..+++++.|+++||+ ||||+++.+.+
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~ 89 (399)
T PRK05122 11 LRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLC 89 (399)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHH
Confidence 34556666677788888888777788899999999999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
++.++.+.+.++...+.. ...+.+.+++.|+++|++.+...+...+++.|.+|++ +|++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 150 (399)
T PRK05122 90 GCALSGLLYLLAGLLAAW-------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL------HTGRVI 150 (399)
T ss_pred HHHHHHHHHHHhhhhhcc-------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh------hhccch
Confidence 888877766654311100 0114567899999999999999999999999998763 466778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhcccccc
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNL 264 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (589)
+++....++|..+++.+++++.+.+||++.+++..++.++.. ....+ .++.++++++
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~------------------- 207 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL---LLARP-RPAVPPVKGE------------------- 207 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH---HHHhc-CCCCCCCCcc-------------------
Confidence 888888899999999999999999999988776554433222 12111 1110000000
Q ss_pred CCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHH-HHHHH
Q 045410 265 GQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMF-PVWIT 343 (589)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~ 343 (589)
+.++ .+..+...... ...+.
T Consensus 208 ----------------------------------------------------~~~~-------~~~~~~~~~~~~~~~~~ 228 (399)
T PRK05122 208 ----------------------------------------------------RLPF-------RRVLGRVWPYGMGLALA 228 (399)
T ss_pred ----------------------------------------------------chhH-------HHHHHHHHHHHHHHHHH
Confidence 0000 00001110000 01111
Q ss_pred HHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHH
Q 045410 344 GIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGIL 423 (589)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~ 423 (589)
...+... ..+...+.. ..+.+ ..........++.++..++.+++ .+|.++| +.+..+..
T Consensus 229 ~~~~~~~-~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~g~l----~~r~~~~-------~~~~~~~~ 287 (399)
T PRK05122 229 SIGFGTI-ATFITLYYA-ARGWD--------GAALALTLFGVAFVGARLLFGNL----INRLGGL-------RVAIVSLL 287 (399)
T ss_pred HHHHHHH-HHHHHHHHH-Hcccc--------cchHHHHHHHHHHHHHHHHHHHH----HHHhccH-------HHHHHHHH
Confidence 1111111 111111111 11110 11112222333333444443333 5555432 35666677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHH
Q 045410 424 MAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSIS 503 (589)
Q Consensus 424 l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 503 (589)
+..+++++..+.. +.+..++..++.|++.+...+.......+.+|++.||++.|+++....+|
T Consensus 288 ~~~~~~~~~~~~~-----------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (399)
T PRK05122 288 VEILGLLLLWLAP-----------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLS 350 (399)
T ss_pred HHHHHHHHHHHhc-----------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 7777766555432 33345556778888888888887788889999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 504 SYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 504 ~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
..+++.+.+.+.+.. ++.+.|.+.+++.+++.++.++..
T Consensus 351 ~~~~~~~~g~l~~~~-----------------g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 351 LGITGPLAGLVASWF-----------------GYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHc-----------------CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999998887532 245677777777777766655553
No 10
>PRK10504 putative transporter; Provisional
Probab=99.94 E-value=2.6e-23 Score=225.35 Aligned_cols=179 Identities=11% Similarity=0.051 Sum_probs=151.5
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+.|.++.+.+..++..+..+.+.+.++.+.. ++|.+..+.+++.+.+.++..++.++.|+++||+ ||||+++.+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 85 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLF 85 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 3445677777888888888877777777764 7999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+.+.++. +.+.++++|+++|++.+...|...+++.|.+|+ +.|++.+++
T Consensus 86 ~~~~~~~~~~~---------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 138 (471)
T PRK10504 86 TLGSLFCALSG---------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR------EQYMAAMTF 138 (471)
T ss_pred HHHHHHHHHhC---------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH------HHHHHHHHH
Confidence 88888877755 667789999999999999999999999999875 457788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
.+...++|..++|.+++++.+..|||+.|++......+..+......+
T Consensus 139 ~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 139 VTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 988999999999999999999999999999877665555544444333
No 11
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=2.4e-23 Score=220.08 Aligned_cols=375 Identities=12% Similarity=0.099 Sum_probs=240.2
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
..+.++.+.+..++...+.+...+.++.|+.+++|+|..+.+++.+.+.+...+++++.|+++||+ ||||+++.+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLAC 91 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHH
Confidence 344556666677777777777778889999999999999999999999999999999999999995 9999999998877
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+........+.. ...+.+.++++|+++|++.+...+...+++.|.+|+ ++|++++++
T Consensus 92 ~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~------~~r~~a~~~ 152 (392)
T PRK12382 92 GLAGLAYLLAAILPVS-------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP------KHSGKVMSW 152 (392)
T ss_pred HHHHHHHHhhhccccc-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc------cccchhhhH
Confidence 7765543332111110 012677899999999999999888888999999876 346778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCC
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQ 266 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (589)
++.+.++|..++|.+++++.+.+||++.+.+..+..++.. ... ++.++.+++++.
T Consensus 153 ~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~--------------------- 207 (392)
T PRK12382 153 NGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFN-GTVRKVPAHAGE--------------------- 207 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHH-HhccCCCCCccc---------------------
Confidence 8888999999999999999988999987665443322221 111 111111100000
Q ss_pred CCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhH-HHHHHHHH
Q 045410 267 ASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAM-FPVWITGI 345 (589)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~ 345 (589)
++ ..+ + ..+..... ........
T Consensus 208 ~~-------------------------------------------------~~~-----~---~~~~~~~~~~~~~l~~~ 230 (392)
T PRK12382 208 RP-------------------------------------------------SLW-----S---VVGLIWKPGLGLALQGV 230 (392)
T ss_pred Cc-------------------------------------------------hHH-----H---HHHHHHHhHHHHHHHHH
Confidence 00 000 0 00000000 00001111
Q ss_pred HHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHH
Q 045410 346 FCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMA 425 (589)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~ 425 (589)
.+..... +.+.+..+ .+.+ ..........+..++..++.++ +.+|+++|+ .+..+..+.
T Consensus 231 ~~~~~~~-~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~g~----l~~r~g~~~-------~~~~~~~~~ 289 (392)
T PRK12382 231 GFAVIGT-FVSLYFAS-KGWA--------MAGFTLTAFGGAFVLMRVLFGW----MPDRFGGVK-------VAIVSLLVE 289 (392)
T ss_pred HHhHHHH-HHHHHHHh-cCCc--------hhHHHHHHHHHHHHHHHHHHHH----HHHhcCCCe-------ehHHHHHHH
Confidence 1111111 11111111 1100 0111122223333444444444 366665442 456677777
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHH
Q 045410 426 ILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSY 505 (589)
Q Consensus 426 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~ 505 (589)
.+++++..+.. +.+...+...+.+++.+...+.......+.+|++.||++.|++++...+|+.
T Consensus 290 ~~~~~~~~~~~-----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 352 (392)
T PRK12382 290 TVGLLLLWLAP-----------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYG 352 (392)
T ss_pred HHHHHHHHHcc-----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 77766554432 3334455667788888888888888889999999999999999999999999
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 045410 506 INSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFF 558 (589)
Q Consensus 506 l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 558 (589)
+++.+.+.+.|.. + +...|.+.+++.+++.++.+..
T Consensus 353 ig~~~~g~l~~~~------g-----------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 353 VSGPLAGMLATSF------G-----------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHh------C-----------chHHHHHHHHHHHHHHHHHHhh
Confidence 9999999887632 1 3457777877777777665544
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=2.5e-23 Score=220.90 Aligned_cols=174 Identities=17% Similarity=0.065 Sum_probs=147.6
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.+|..+.......+++....+...... +.+.+++|.++.+.+++.+.+.++..++.++.|+++|| +|||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAA-PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHH
Confidence 567777777778888877766655544 45567899999999999999999999999999999999 5999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..++.+++.++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.++
T Consensus 90 ~~~~~~~~~~~~---------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~~ 142 (406)
T PRK11551 90 FGLFSLATAQAW---------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP------RLRGTAVS 142 (406)
T ss_pred HHHHHHHHHHhc---------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH------HHHHHHHH
Confidence 888888887765 677889999999999999999999999999986 45788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~ 228 (589)
+++...++|..+++.+++.+.+..+|++.|++.+++.++..+.
T Consensus 143 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK11551 143 LMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPL 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888888889999998876554444433
No 13
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=2.1e-23 Score=227.21 Aligned_cols=402 Identities=14% Similarity=0.074 Sum_probs=242.2
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
.|..+..+.+..++..+....+.+. .+.+.+++|.+..+.+|+.+.+.++..++.++.|+++|| +|||++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a-~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA-APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 3455555555666666654444444 445567999999999999999999999999999999999 59999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++++++++++ +.+.++++|+++|+|.+...|.....+.+.++++ ++|++.+++
T Consensus 82 ~~~~~~~~~a~---------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~-----~~r~~~~g~ 135 (495)
T PRK14995 82 GLASLAAAFSP---------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE-----KQRNMALGV 135 (495)
T ss_pred HHHHHHHHHcC---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-----HHHHHHHHH
Confidence 99999999977 7788999999999999999988888888877542 468889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHH------HHHHHhcc
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKV------ITASCRKR 260 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 260 (589)
+....++|..+||.+++++.+++|||+.|++...+.++.+++..+..|+.+.++.++.+....... .....++.
T Consensus 136 ~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~ 215 (495)
T PRK14995 136 WAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTA 215 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999877665555544444434322111111111111000 00011110
Q ss_pred ccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhH-HH
Q 045410 261 KVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAM-FP 339 (589)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~ 339 (589)
.. .. +..... .. .-............. + .. ......+++.+++ +..... ..
T Consensus 216 ~~----~~----~~~~~~----~~-------~~~~~~~~l~~f~~~-e-~~-~~~p~~~~~lf~~------~~~~~~~~~ 267 (495)
T PRK14995 216 LK----GF----LSLWVT----SL-------TLLTGALLLGLFIRT-Q-LA-ASRPMIDMRLFTH------RIILSGVVM 267 (495)
T ss_pred cc----cC----CchHHH----HH-------HHHHHHHHHHHHHHH-H-hc-CCCCCcCHHHhCC------cccHHHHHH
Confidence 00 00 000000 00 000000000000000 0 00 0000111111111 111111 11
Q ss_pred HHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHH
Q 045410 340 VWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRIT 419 (589)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~ 419 (589)
.+.....++ ....+.+.+.....+.+. ...+.......+...+..++.+++ .+|+++| +.+.
T Consensus 268 ~~~~~~~~~-~~~~~~~~~lq~v~g~s~------~~ag~~~~~~~~~~~~~~~~~g~l----~~r~g~~-------~~~~ 329 (495)
T PRK14995 268 AMTAMITLV-GFELLMAQELQFVHGLSP------LEAGMFMLPVMVASGFSGPIAGIL----VSRLGLR-------LVAT 329 (495)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHHHH----HHHcCch-------HHHH
Confidence 111111111 111111122111122221 112222333344444555554444 6676543 3566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHH
Q 045410 420 IGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLS 499 (589)
Q Consensus 420 ~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~ 499 (589)
.|+++..+++.++..... ..+.+......++.|+|.+...+.....+.+.+|++.++.+.+++++.
T Consensus 330 ~g~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 395 (495)
T PRK14995 330 GGMALSALSFYGLAMTDF--------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMA 395 (495)
T ss_pred HHHHHHHHHHHHHHHhcC--------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHH
Confidence 777777777765554321 123334455678889999888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 045410 500 LSISSYINSALVNIIHG 516 (589)
Q Consensus 500 ~~lg~~l~~~l~~~i~~ 516 (589)
..+|+.+|+.+.+.+.+
T Consensus 396 ~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 396 YELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=2.2e-23 Score=223.38 Aligned_cols=163 Identities=12% Similarity=0.062 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIM 113 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~ 113 (589)
.+...++..+..+.+...++.+ .+++|++..+.+++.+.+.++..++.++.|+++|| +|||+++.++.++..++.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHH
Confidence 3344444444444444545444 56799999999999999999999999999999999 599999999999999999988
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH
Q 045410 114 TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV 193 (589)
Q Consensus 114 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 193 (589)
.++. +++.+++.|++.|++.|...+...+++.|++|+ ++|++.+++++.+.++
T Consensus 106 ~~~~---------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~------~~rg~~~~~~~~~~~~ 158 (434)
T PRK11663 106 GFSS---------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR------TERGGWWAIWNTAHNV 158 (434)
T ss_pred HHHh---------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH------HHHHHHHHHHHHHHHH
Confidence 8876 778888999999999999899999999999986 4588899999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHHHHHHHH
Q 045410 194 ALVVALTAVVYIQTNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 194 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~ 225 (589)
|..+++.+.+++.+.+|||+.|++.++..++.
T Consensus 159 g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 159 GGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876654433
No 15
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-24 Score=218.63 Aligned_cols=405 Identities=12% Similarity=0.058 Sum_probs=265.5
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHH---HHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIAN---MTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY 101 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 101 (589)
+.+.|.-+.++...++.+.+||-+.-. ..+++.++.|+|.+|.|.+.+.+.+.+.++..+.|.++||. +.|+.+-+
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~ 99 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehH
Confidence 333333488888999999999988754 46889999999999999999999999999999999999995 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLE 181 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (589)
++++..+..+++.+++ +.+.+.+..++.|..+|.-.|.+..++..+|+. ++|+
T Consensus 100 gLilsai~nil~Gfs~---------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr------~eRG 152 (448)
T COG2271 100 GLILSAIVNILFGFSP---------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR------KERG 152 (448)
T ss_pred HHHHHHHHHHHHhhhh---------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc------cccC
Confidence 9999999999999987 677888899999999999999999999999987 4588
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--HHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhc
Q 045410 182 SFFNWWYFSFTVALVVALTAV--VYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRK 259 (589)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~~--~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (589)
+..++++.+-|+|+.+.|.+. +++..+.+||..|++++++.++..++.++..+. .|+..-.+++.+
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd----~Pqs~GLP~ie~-------- 220 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD----RPQSEGLPPIEE-------- 220 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC----CccccCCCCHHH--------
Confidence 889999999999999999999 899988899999999998876665555544332 232211111100
Q ss_pred cccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHH-HHHhHH
Q 045410 260 RKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLK-LLVAMF 338 (589)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 338 (589)
..++..+ ..++. .++.....|+.+.+ .+...| ..+..+
T Consensus 221 ------------~~~d~~e------------------------~~~~~----~~~~~ls~~~i~~~-YVL~Nk~iW~la~ 259 (448)
T COG2271 221 ------------YRGDPLE------------------------IYEEE----KENEGLTAWQIFVK-YVLKNKLIWLLAL 259 (448)
T ss_pred ------------hhcCchh------------------------hhhhh----ccCCCccHHHHHHH-HHHcChHHHHHHH
Confidence 0000000 00000 00000111222221 111222 222333
Q ss_pred HHHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHH
Q 045410 339 PVWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRI 418 (589)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i 418 (589)
..++..++-+.+..+.+. ++.+..+++. ....+...+...+.+.+..+.+++ +||+-+.++ . ...
T Consensus 260 a~vfvYivR~gi~dW~p~-YL~e~k~~s~------~~a~~a~~lfE~agl~G~Ll~Gwl----SDklfkgrR--~--p~~ 324 (448)
T COG2271 260 ANVFVYVVRYGINDWGPL-YLSEVKGFSL------VKANWAISLFEVAGLPGTLLAGWL----SDKLFKGRR--G--PMA 324 (448)
T ss_pred HHHHHHHHHHHHhhhHHH-HHHHhcCCCH------HHHHHHHHHHHHHhhHHHHHHHHH----HHHhccccc--c--hHH
Confidence 334444444444333333 3334444443 335666677788888888888888 555432210 1 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHH--HHHhhccCchhhHHHHHHH
Q 045410 419 TIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVM--EFLTTQLPESMRTVSGAVF 496 (589)
Q Consensus 419 ~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~--~~~~~~~P~~~rg~~~g~~ 496 (589)
.+.+++..++++.+...+ ..+.+... ..+..+|.....|... ....|.+|++..|++.|+.
T Consensus 325 ~i~~~~i~~~~~~~w~~~---------------~~~~~l~~--~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~ 387 (448)
T COG2271 325 LIFMLLITASLVLYWLAP---------------NGSYLLDA--ILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFV 387 (448)
T ss_pred HHHHHHHHHHHHHHHcCC---------------CccHHHHH--HHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchh
Confidence 333333444433333321 12333332 3333444444444422 2456999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 497 FLSLSI-SSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 497 ~~~~~l-g~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
.++..+ |++++....+.+.|.. +|.+ .|.++.+.++++.+++....
T Consensus 388 Glf~Yl~Ga~~a~~~~g~i~d~~------gW~g-----------~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 388 GLFAYLIGAALAGLPLGYIADTW------GWDG-----------GFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hhHHHHhhHHhcCCcceeeEecC------CCcc-----------hHHHHHHHHHHHHHHHHHHH
Confidence 999888 8889988888887653 6654 45555555555555555443
No 16
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=4.8e-23 Score=218.33 Aligned_cols=345 Identities=14% Similarity=0.141 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+.++..+++..++.+.+.++++.|+.+++|++..+.|.+.+...+...+..+++|+++|| +|||++++.+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHH
Confidence 566678999999999999999999999999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
.+.+.+ +.+.+++.|+++|++.+...|...+++.|.+|+ ++|++.+++.+...
T Consensus 92 ~~~~~~---------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~a~~~~~~~~ 144 (400)
T PRK11646 92 TMAIAH---------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP------HQRGRFFSLLMMQD 144 (400)
T ss_pred HHHHhc---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHHH
Confidence 888765 678889999999999998889999999999886 45788999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCC
Q 045410 192 TVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNS 271 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (589)
++|..+||.+++++. .++|++.|++.++..++..++..+..++.+. ++..++. .
T Consensus 145 ~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~---~--------------------- 198 (400)
T PRK11646 145 SAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPV---R--------------------- 198 (400)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhh---H---------------------
Confidence 999999999999998 6899999998776555444333332221100 0000000 0
Q ss_pred ccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhh
Q 045410 272 LYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAM 351 (589)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 351 (589)
..++ +..++.+ .+...... ..++...
T Consensus 199 ----------------------------------------------~~~~----~~~~~~~-~~~~~~~~---~~~~~~~ 224 (400)
T PRK11646 199 ----------------------------------------------EGMT----RVLRDKR-FVTYVLTL---TGYYMLA 224 (400)
T ss_pred ----------------------------------------------HHHH----HHHcCch-HHHHHHHH---HHHHHHH
Confidence 0000 0000011 11111111 0111111
Q ss_pred hcc---hhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 045410 352 DQQ---NTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILS 428 (589)
Q Consensus 352 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~ 428 (589)
.+. .+.+.... ..+. ...+.+..++.+..+..... ..+..+|+ .+..+.+..++++.+++
T Consensus 225 ~~~~~~~p~~~~~~-~~~~------~~~g~l~~~~~~~~~~~~~~----~~~~~~~r------~~~~~~~~~~~~~~~~~ 287 (400)
T PRK11646 225 VQVMLMLPIMVNDI-AGSP------SAVKWMYAIEACLSLTLLYP----IARWSEKR------FRLEHRLMAGLLIMSLS 287 (400)
T ss_pred HHHHHhhhhhHHhh-cCCc------hHHHHHHHHHHHHHHHHHHH----HHHHHHHh------cchhHHHHHHHHHHHHH
Confidence 111 11111111 1111 11112222222222222111 12222221 12233566777777777
Q ss_pred HHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHH
Q 045410 429 LLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINS 508 (589)
Q Consensus 429 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~ 508 (589)
++++++.+ +.+.++....+.+++.+...|...++..+.+|++.||+++|++++...+|..+|+
T Consensus 288 ~~~l~~~~-----------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~ 350 (400)
T PRK11646 288 MFPIGMVS-----------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGY 350 (400)
T ss_pred HHHHHHhh-----------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcc
Confidence 76665543 2334444556677888888888899999999999999999999999999999999
Q ss_pred HHHHHhhhcc
Q 045410 509 ALVNIIHGLT 518 (589)
Q Consensus 509 ~l~~~i~~~~ 518 (589)
.+.|.+.|.+
T Consensus 351 ~l~G~l~~~~ 360 (400)
T PRK11646 351 IGGGWLFDLG 360 (400)
T ss_pred cchHHHHHHH
Confidence 9999998753
No 17
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=1.5e-22 Score=225.96 Aligned_cols=155 Identities=14% Similarity=0.052 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 48 LIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
+...+.+++.+++|++..+.+++.+++.++..++.+++|+++|| +|||+++++++++.+++.++++++.
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~---------- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQ---------- 253 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 34556677778999999999999999999999999999999999 5999999999999999999988876
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+.+.++++|++.|++.|+..++..+++.|.+|+ +.|+..+++......+|.++++.++..+..
T Consensus 254 -----------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~------~~Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 254 -----------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ------EKRGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999986 457888888888889999999887766654
Q ss_pred h-------------cchhHhHHHHHHHHHHHHHHHH
Q 045410 208 N-------------VSWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 208 ~-------------~g~~~~f~~~~~~~~i~~~~~~ 230 (589)
. .+||+.|++.++..++.++..+
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~ 352 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALT 352 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3 3588888877665555544433
No 18
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=3.1e-23 Score=219.46 Aligned_cols=176 Identities=18% Similarity=0.190 Sum_probs=152.1
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
.+|+.+.++...++...+++.+.++++.|+++++|++..+.+++.+.+.+...++.++.|+++|| +|||++++++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHH
Confidence 45667777788999999999999999999999999999999999999999999999999999999 59999999999988
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+.+.+++ +.+.++++|.+.+.+.+...++..++..|.+|+ ++|++.+++
T Consensus 84 ~~~~~~~~~~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~ 136 (395)
T PRK10054 84 ASGFIAIPLVN---------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSS------TSKTKIFSL 136 (395)
T ss_pred HHHHHHHHHHh---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------hHHHHHHHH
Confidence 88888888866 667777888888888888888899999998875 457788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
.+...++|..++|.+++++.+ .+|+.+|++.+++.++.++...+
T Consensus 137 ~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 137 NYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998875 78999999877766655444333
No 19
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=3.2e-23 Score=221.07 Aligned_cols=392 Identities=11% Similarity=0.015 Sum_probs=239.7
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIM 113 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~ 113 (589)
++...++..++.......++.+. ++++.+..+.+++.+.+.+...++.++.|+++||+ |||++++.+.++..++....
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 33445566665444445555554 56788999999999999999999999999999995 99999999888877776665
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH
Q 045410 114 TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV 193 (589)
Q Consensus 114 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 193 (589)
......+ ..+.+.+++.|++.|++.+...+...+++.|.+|+ ++|++..++.+...++
T Consensus 100 ~~~~~~~----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 157 (417)
T PRK10489 100 ALNAFLP----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR------ENLMQAGAITMLTVRL 157 (417)
T ss_pred HHHHHcC----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH------HHHHHHHHHHHHHHhH
Confidence 4321000 01567788899999999888888889999998875 3467788888889999
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCcc
Q 045410 194 ALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLY 273 (589)
Q Consensus 194 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (589)
|..+||.+++.+.+..+|++.|++..+..++..+..+. .++. +++.++. +++
T Consensus 158 g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~---~~~~~~~-------------------~~~----- 209 (417)
T PRK10489 158 GSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPAL---PPPPQPR-------------------EHP----- 209 (417)
T ss_pred HHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCC---CCCCccc-------------------ccc-----
Confidence 99999999999998889999998876655544433322 2211 1100000 000
Q ss_pred CCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhc
Q 045410 274 DPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQ 353 (589)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 353 (589)
..+..+ .+ +.....+.+...+...+....... ...
T Consensus 210 --------------------~~~~~~-------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (417)
T PRK10489 210 --------------------LRSLLA-------------------GF-----RFLLASPVVGGIALLGGLLTMASA-VRV 244 (417)
T ss_pred --------------------hHHHHH-------------------HH-----HHHHcChHHHHHHHHHHHHHHHHh-HHH
Confidence 000000 00 000000011111100011111111 111
Q ss_pred chhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 045410 354 QNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAG 433 (589)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~ 433 (589)
+.+.+.....+.+.. ..+.+.....++.+++..+.+++ .+|. ++.+.+..+.++..++++++.
T Consensus 245 ~~p~~~~~~~g~~~~------~~g~~~~~~~~g~~ig~~~~~~l----~~~~-------~~~~~l~~~~~~~~~~~~~~~ 307 (417)
T PRK10489 245 LYPALADEVWQMGAA------QIGLLYAAVPLGAALGALTSGWL----AHSA-------RPGLLMLLSTLGSFLAVGLFG 307 (417)
T ss_pred hhHHHHHhccCCChh------HhHHHHHHHHHHHHHHHHHHHHh----hhcc-------CcchHHHHHHHHHHHHHHHHH
Confidence 111111111111111 12222333334444444443332 3332 222355666666666665554
Q ss_pred HHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 434 FVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNI 513 (589)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~ 513 (589)
+.+ +.+..+....+.+++.+...+..+++..+..|++.||++.|++++...+|..+++.+.|.
T Consensus 308 ~~~-----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~ 370 (417)
T PRK10489 308 LMP-----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGG 370 (417)
T ss_pred ccc-----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 322 334445566667777777777778899999999999999999999999999999999998
Q ss_pred hhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Q 045410 514 IHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVSSNAIGKKES 573 (589)
Q Consensus 514 i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (589)
+.+..+ +...+...+++.++..++.+...+++|+.+.++.+++
T Consensus 371 l~~~~g-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 371 LGAMMT-----------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHhc-----------------hhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 876321 2235666666666666666666677777666666543
No 20
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=2.2e-22 Score=213.65 Aligned_cols=383 Identities=15% Similarity=0.089 Sum_probs=240.0
Q ss_pred CCchH-HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhH-----HHHHHHHHHHHHHhhhhhhhHHhhhcccchHHH
Q 045410 26 GGWRS-IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGIL-----LVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTL 99 (589)
Q Consensus 26 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l 99 (589)
.+|++ ........++...+++...+.++.|++ ++|.+..+ .+++.+++.+...++.++.|+++||+ |||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~ 87 (408)
T PRK09874 10 INWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIML 87 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHH
Confidence 34554 333445677777777777788888875 58888655 48889999999999999999999995 999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchh
Q 045410 100 LYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQ 179 (589)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 179 (589)
+.+.++..++.+++.+.. +.+.+++.|++.|++.+ ..+...+++.|.+|+ ++
T Consensus 88 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~------~~ 139 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQ---------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPR------NK 139 (408)
T ss_pred HHHHHHHHHHHHHHHHHh---------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCH------hh
Confidence 999999888888877765 67789999999999865 467778888898876 34
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhc
Q 045410 180 LESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRK 259 (589)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (589)
|++..++.+...++|..++|.+++.+.+..+|++.|++..++.++..+..+...++.+ ++.+++.....+
T Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------- 209 (408)
T PRK09874 140 SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENF--QPVSKKEMLHMR-------- 209 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCc--ccccchhhhHHH--------
Confidence 6778888888999999999999999999899999998877765555444433332211 010000000000
Q ss_pred cccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHH
Q 045410 260 RKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFP 339 (589)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 339 (589)
+..... + +.+.....+.
T Consensus 210 ---------------------------------------~~~~~~------------~------------~~~~~~~~~~ 226 (408)
T PRK09874 210 ---------------------------------------EVVTSL------------K------------NPKLVLSLFV 226 (408)
T ss_pred ---------------------------------------HHHHhC------------c------------CCchHHHHHH
Confidence 000000 0 0000000000
Q ss_pred HHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHH
Q 045410 340 VWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRIT 419 (589)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~ 419 (589)
. ............+....+...............+.+..+..+..++..+..+++ .+|+++| +.+.
T Consensus 227 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l----~dr~g~~-------~~~~ 292 (408)
T PRK09874 227 T---TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKL----GDRIGPE-------KILI 292 (408)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhccccc-------hhHH
Confidence 0 011111111111111111111000000000001111222233334444443333 6665444 3555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHH
Q 045410 420 IGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLS 499 (589)
Q Consensus 420 ~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~ 499 (589)
.++.+..++++...+.. +.+.+.+..++.+++.+...+...++..+..|++.||+..++++..
T Consensus 293 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (408)
T PRK09874 293 TALIFSVLLLIPMSFVQ-----------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSF 355 (408)
T ss_pred HHHHHHHHHHHHHHHhc-----------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHH
Confidence 66666655555444332 3334455667788888888898889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 500 LSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 500 ~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
..+|..+++.+.+.+.+.. ++...|.+.+++.+++.++.++..
T Consensus 356 ~~~g~~~gp~~~G~l~~~~-----------------g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 356 RDIGNVTGPLMGAAISANY-----------------GFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHhhHHHHHHHHhhc-----------------chhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887522 245678888888887777665543
No 21
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.93 E-value=5.8e-22 Score=215.75 Aligned_cols=175 Identities=16% Similarity=0.108 Sum_probs=128.3
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhH-HHH-----HHHHHHHHHHhhhhhhhHHhhhcccchHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGIL-LVN-----VVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY 101 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 101 (589)
++.++...+..+++.+.++ +..+..+++.+.++.+..+ ..+ +.++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4445555567777777644 5666777888887543322 122 24677788999999999999995 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLE 181 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (589)
+.+++++++++++++++...+ ....+.+++++|+++|++.|+..+...+++.|.+|++ +|+
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~-------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~------~Rg 153 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATI-------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDR------KRG 153 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHH-------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCC------CCc
Confidence 999999999999997622110 0001235899999999999999999999999999873 366
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH--------hhcchhHhHHHHHHHHH
Q 045410 182 SFFNWWYFSFTVALVVALTAVVYIQ--------TNVSWILGFAIPTGCFF 223 (589)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 223 (589)
...++...+.++|..+++.+...+. ..+|||+.|++.+...+
T Consensus 154 ~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 154 FMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 6777777777788887776654443 25799999998665433
No 22
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=1.5e-22 Score=212.61 Aligned_cols=156 Identities=18% Similarity=0.157 Sum_probs=137.1
Q ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 48 LIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
..+...+++.+++|+++.+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++..+++++.
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~---------- 80 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG---------- 80 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc----------
Confidence 344555668889999999999999999999999999999999995 999999999999999999988876
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+.+.++++|++.|++.+...+...+++.|.+|+ ++|++.+++.+...++|..+++.+++++.+
T Consensus 81 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 143 (399)
T TIGR00893 81 -----------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA------SERATAVSIFNSAQGLGGIIGGPLVGWILI 143 (399)
T ss_pred -----------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH------HHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999986 568889999999999999999999999999
Q ss_pred hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 208 NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
..+|++.|++.++..++..+..+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 144 HFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred hCCchHHHHHHHHHHHHHHHHhhh
Confidence 899999998877665554444333
No 23
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1e-22 Score=216.63 Aligned_cols=179 Identities=13% Similarity=0.087 Sum_probs=148.7
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
|.+|+..+.+.+..+++..... ...+..+.+++++|+++.+.+++.+++.+++.+++++.|+++|| +|||+++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRI-NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhh-hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHH
Confidence 3467766665555555555544 34455568899999999999999999999999999999999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
++.++.+++++++ +.+.+++.|+++|++.+...|....++.|.+|+ ++|++.+
T Consensus 82 ~~~~~~~~~~~~~---------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~------~~rg~~~ 134 (412)
T TIGR02332 82 LWGIASTATMFAT---------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA------YFRARAN 134 (412)
T ss_pred HHHHHHHHHHHhc---------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH------HHHHHHH
Confidence 9999999999877 677899999999999999999999999999986 4588899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh------hcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 185 NWWYFSFTVALVVALTAVVYIQT------NVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~------~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
++++....+|..+++.+++++.+ ..|||+.|++.++..++..++.++.
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 135 ALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998874 3699999998776655544444333
No 24
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.93 E-value=2.5e-22 Score=217.63 Aligned_cols=175 Identities=9% Similarity=-0.020 Sum_probs=131.3
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+++.+.......++.....+.+. .+.+++.+++|++..+.+++.+.+.+++.++.+++|+++|| +|||+++..+.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAA-PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHH
Confidence 34444444445555555544443 34456778999999999999999999999999999999999 59999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
+++.++++++. +.+.+++.|+++|++.+... ....++.|.+|+ +.|++++++
T Consensus 112 ~~~~~~~~~~~---------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~------~~rg~a~g~ 163 (476)
T PLN00028 112 APAVFCMSLVS---------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNG------KIVGTANGI 163 (476)
T ss_pred HHHHHHHHHhc---------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcCh------hheeHHHHH
Confidence 99888888866 56778889999999988654 355678899986 347778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---------hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQT---------NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~---------~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
.+...++|..+++.+.+.+.. ..|||+.|++.+++.++..+..++
T Consensus 164 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 164 AAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 777777777777666655432 148999999877766555444333
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=2.1e-22 Score=210.48 Aligned_cols=154 Identities=17% Similarity=0.078 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHh-hcCCCCCCCCC
Q 045410 49 IANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLT-ASIPKLRPPDC 127 (589)
Q Consensus 49 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~-~s~~~~~~~~~ 127 (589)
..+..+.+.+++|+|+.+.+++.+.+.+++.+++++.|+++||+ |||+++..+.+....+.. .... .
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~~---------- 77 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDPF---------- 77 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHhc----------
Confidence 44455566779999999999999999999999999999999995 999887655544444432 2232 3
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+.+.++++|+++|++.+. .......++|.+|+ ++|++.+++.+.+.++|..+++.+++++.+
T Consensus 78 -----------~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~------~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~ 139 (368)
T TIGR00903 78 -----------NYEWLLACQLLAALGQPF-LLNAFAPAASQIRE------ERRDLVISLLSFAMYLGIIFALAAGLKIYT 139 (368)
T ss_pred -----------cHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999986 45556667898886 468889999999999999999999999999
Q ss_pred hcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 208 NVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
.+|||+.|++.+++.++..++.++.
T Consensus 140 ~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 140 AGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988666655554444443
No 26
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=7.5e-22 Score=201.72 Aligned_cols=377 Identities=13% Similarity=0.086 Sum_probs=252.9
Q ss_pred CCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHH
Q 045410 24 PKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGS 103 (589)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 103 (589)
++..|..++.+.+..|.....=+.... +-+-+.+++|+|..++|++++.|.++..++.|+...++|| +.||++++...
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~g-LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVG-LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHh-chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHH
Confidence 345677777777777777776665444 4445678999999999999999999999999999999999 59999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 104 IASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 104 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
.+++++.+++++++ +++.+.++|++.|+..|.+.+...++..++.|++ +|+++
T Consensus 86 ~lFi~~n~l~alAp---------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~------~~~~A 138 (394)
T COG2814 86 ALFIVSNLLSALAP---------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPG------KRGRA 138 (394)
T ss_pred HHHHHHHHHHHHhc---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------chhhH
Confidence 99999999999988 8899999999999999999999999999999984 47788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCC--ChHHHHHHHHHHHHhccc
Q 045410 184 FNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQG--SVFVDMAKVITASCRKRK 261 (589)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 261 (589)
+++...+.+++.++|..++.++.+.+|||..|+....+.++.++..+...| +++.+++ .+..+..+ .+|
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~~~~~~~----~l~--- 209 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPGPLRTLLR----LLR--- 209 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcchhHHHH----Hhc---
Confidence 999999999999999999999999999999999988887777776666555 1111110 00000000 000
Q ss_pred cccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHH
Q 045410 262 VNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVW 341 (589)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 341 (589)
+.+....+...+
T Consensus 210 --------------------------------------------------------------------~p~v~~~l~~t~ 221 (394)
T COG2814 210 --------------------------------------------------------------------RPGVLLGLLATF 221 (394)
T ss_pred --------------------------------------------------------------------CchHHHHHHHHH
Confidence 001111122222
Q ss_pred HHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHH
Q 045410 342 ITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIG 421 (589)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g 421 (589)
+.....+..|.+..+ +..+..+++.. ..++......++.+++..+.+++ .|| +.++.+...
T Consensus 222 l~~~g~F~~ftYi~P-~L~~v~g~s~~------~vs~~Ll~~Gv~~~~Gn~~gGrl----~dr--------~~~~~l~~~ 282 (394)
T COG2814 222 LFMTGHFALYTYIRP-FLESVAGFSVS------AVSLVLLAFGIAGFIGNLLGGRL----ADR--------GPRRALIAA 282 (394)
T ss_pred HHHcchhhhHHhHHH-HHHHccCCCHh------HHHHHHHHHHHHHHHHHHHHhhh----ccc--------cchhHHHHH
Confidence 222222222222222 11222222221 12333333344444444443333 444 223356666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccC--chhhHHHHHHHHHH
Q 045410 422 ILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLP--ESMRTVSGAVFFLS 499 (589)
Q Consensus 422 ~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P--~~~rg~~~g~~~~~ 499 (589)
+.+.++.++.+.+.. .+.+..+....+.++... |..+.+..+.++ ++.+..+++++...
T Consensus 283 ~~l~a~~~l~l~~~~----------------~~~~~~~~~~~~wg~a~~---~~~~~~~~~~a~~~p~~~~~a~sl~~aa 343 (394)
T COG2814 283 LLLLALALLALTFTG----------------ASPALALALLFLWGFAFS---PALQGLQTRLARLAPDAADLAGSLNVAA 343 (394)
T ss_pred HHHHHHHHHHHHHhc----------------chHHHHHHHHHHHHHHhh---hhhhHHHHHhcccCCCchHHHHHHHHHH
Confidence 677777777666553 133333444444444443 444444444444 56799999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 045410 500 LSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACR 561 (589)
Q Consensus 500 ~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 561 (589)
.++|..+|..++|.+.|.. ++....++.+...++++++.+...+.
T Consensus 344 ~nlgia~GA~lGG~v~~~~-----------------g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 344 FNLGIALGAALGGLVLDAL-----------------GYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHhh-----------------chHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998732 23455667777777776666555443
No 27
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=7.4e-22 Score=208.81 Aligned_cols=172 Identities=11% Similarity=0.122 Sum_probs=148.2
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+..|+.+..+....++.....|.....++. +.+++|+++.+.++..+++.++..++.++.|+++|| +||||+++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHH
Confidence 447887777776666666666655555555 567899999999999999999999999999999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+.+++.+++.++. +.+.+++.|+++|++.+...+...+++.|.+|+ ++|++..
T Consensus 94 ~~~~~~~~~~~~~---------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~------~~~~~a~ 146 (394)
T PRK10213 94 LLTLSCLLVSFAN---------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPP------RTVPKAL 146 (394)
T ss_pred HHHHHHHHHHHHC---------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH------hHHHHHH
Confidence 9999998888866 788899999999999999999999999999986 4577889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~ 225 (589)
++.....++|..++|.+++++.+.+|||+.|++.+++.++.
T Consensus 147 ~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~ 187 (394)
T PRK10213 147 SVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLC 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876554443
No 28
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=1.1e-22 Score=220.70 Aligned_cols=152 Identities=14% Similarity=0.062 Sum_probs=121.2
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCCCCCCCCch
Q 045410 60 YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASI-PKLRPPDCTGAQCPQPEGW 138 (589)
Q Consensus 60 lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~ 138 (589)
+|.++.+.+++.+++.++..++++++|+++|| +||||+++.+.+++.++.+.+++.... ..... .+..
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~----------~~~~ 118 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP----------DNTG 118 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhccccccccc----------cchh
Confidence 38999999999999999999999999999999 599999999999999888877763200 00000 0112
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH--------hhcc
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQ--------TNVS 210 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~g 210 (589)
....++++|+++|++.|...+...++++|++|+ ++|++.+++...+..+|..+++.++..+. +.+|
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~------~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 192 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPA------HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG 192 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCCh------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC
Confidence 456788999999999999999999999999987 45778899988888999999887765543 3468
Q ss_pred hhHhHHHHHHHHHHHHHH
Q 045410 211 WILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~ 228 (589)
||+.|++.++..++..+.
T Consensus 193 Wr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 193 WRYMFASEAIPALLFLML 210 (479)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999999877666555443
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=2.9e-22 Score=211.94 Aligned_cols=367 Identities=10% Similarity=-0.001 Sum_probs=230.1
Q ss_pred HHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHh
Q 045410 37 NETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLT 116 (589)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~ 116 (589)
+.+..+..++.+. .+.+.+.+++|+|..+.+++.+.+.+++.+++++.|+++||+ |||+++..+.++++++.++++++
T Consensus 17 ~~~~~~~~~~~~~-~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 17 IGLNMRPLLTSVG-PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY 94 (393)
T ss_pred HHHHcchhhhccc-hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC
Confidence 3333333334444 444556789999999999999999999999999999999995 99999999999999999999998
Q ss_pred hcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHH
Q 045410 117 ASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALV 196 (589)
Q Consensus 117 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 196 (589)
+ +++.++++|+++|++.+...+....++.|.+|+ +|++.++.+..+.++|..
T Consensus 95 ~---------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~g~~ 146 (393)
T PRK09705 95 P---------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQ-------RTPLVMGLWSAALMGGGG 146 (393)
T ss_pred c---------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccc-------cchhHHHHHHHHHHHHHH
Confidence 7 667799999999999999999999999998862 266788888888899999
Q ss_pred HHHHHHHHHHhhc-chhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCC
Q 045410 197 VALTAVVYIQTNV-SWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDP 275 (589)
Q Consensus 197 ~~~~~~~~l~~~~-g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (589)
+++.+++++.++. +||..+.+.++..++.+...+...++ +|++++ +++. .
T Consensus 147 ~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------------------~~~~-----~- 197 (393)
T PRK09705 147 LGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAR----EVASSH-------------------KTTT-----T- 197 (393)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCcccc-------------------CCCc-----C-
Confidence 9999999988875 79988765444433332222221111 111000 0000 0
Q ss_pred CCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcch
Q 045410 276 PLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQN 355 (589)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 355 (589)
. ...+ .+.+.....+........++......+
T Consensus 198 ~----------------------------------------~~~l--------~~~~~~~l~~~~~~~~~~~~~~~~~lp 229 (393)
T PRK09705 198 P----------------------------------------VRVV--------FTPRAWTLGVYFGLINGGYASLIAWLP 229 (393)
T ss_pred C----------------------------------------cccc--------cCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 001111111111111122222222222
Q ss_pred hhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 045410 356 TIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFV 435 (589)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~ 435 (589)
... .+ .+.+. ...+....+..++.+++..+.+++ .||.++| +.+.+++.+..++.+++...
T Consensus 230 ~~l-~~-~g~s~------~~ag~~~~~~~i~~i~g~~~~g~l----~~r~~~~-------~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 230 AFY-IE-IGASA------QYSGSLLALMTLGQAAGALLMPAM----ARHQDRR-------KLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred HHH-HH-cCCCh------hhhhHHHHHHHHHHHHHHHHHHHH----Hhhccch-------HHHHHHHHHHHHHHHHHHHc
Confidence 222 11 12221 112333334444455555554443 6665433 35566766766666554432
Q ss_pred HHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccC-chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 436 ERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLP-ESMRTVSGAVFFLSLSISSYINSALVNII 514 (589)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 514 (589)
. . +...+ ...+.+++.+...|.......+..+ ++.+++..++.+....++..+++.+.+.+
T Consensus 291 ~---------------~-~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l 352 (393)
T PRK09705 291 P---------------L-QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL 352 (393)
T ss_pred c---------------c-hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1 11111 1234566666667777767677774 68899999999999999999999999999
Q ss_pred hhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 045410 515 HGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFV 563 (589)
Q Consensus 515 ~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~ 563 (589)
.|..+ ++...|++.+++.++..+..+.+.+|++
T Consensus 353 ~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 353 RSISG----------------NYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHhC----------------CchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 87432 1345677777777777666666655544
No 30
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=2.6e-22 Score=212.35 Aligned_cols=172 Identities=13% Similarity=0.132 Sum_probs=147.4
Q ss_pred CCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHH
Q 045410 24 PKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGS 103 (589)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 103 (589)
.+.+|+....+.+..+.+.+..+.+.. ..+.+.+++|+++.+.+++.+++.++..++.++.|+++||+ |||++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVAL-VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 456788877777888888887665544 44566789999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 104 IASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 104 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
++..++.+++.++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.
T Consensus 85 ~~~~~~~~~~~~~~---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~------~~~~~~ 137 (405)
T TIGR00891 85 VLFSAGTLACGFAP---------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK------HLRNKA 137 (405)
T ss_pred HHHHHHHHHHHHhc---------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh------hhhhHH
Confidence 99999998888866 677899999999999999999999999999986 347788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc--hhHhHHHHHHHHHH
Q 045410 184 FNWWYFSFTVALVVALTAVVYIQTNVS--WILGFAIPTGCFFL 224 (589)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~~~~l~~~~g--~~~~f~~~~~~~~i 224 (589)
+++++...++|..+++.+++.+.+..+ ||+.|++..+..++
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIF 180 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 999999999999999999999888766 99998876544443
No 31
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=2.8e-22 Score=208.76 Aligned_cols=357 Identities=11% Similarity=0.077 Sum_probs=230.2
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIM 113 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~ 113 (589)
++...++..++.......++.|.. +++.++.+.+++.+++.++..++.++.|+++||+ ||||+++.+.++..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 344666666666666666777765 5899999999999999999999999999999995 99999999999888888777
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH
Q 045410 114 TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV 193 (589)
Q Consensus 114 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 193 (589)
.+....+. .+.+.++++|++.|++.+...+...+++.|.+|+ ++|++.+++.+...++
T Consensus 82 ~~~~~~~~----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 139 (365)
T TIGR00900 82 PFVALLGG----------------LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE------EQLTQANSLSQAVRSL 139 (365)
T ss_pred HHHHHcCC----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH------HHHHHHHhHHHHHHHH
Confidence 76542211 2677899999999999999999999999999986 4588899999999999
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHH-HHHHHHHHHHhccccccCCCCCCCc
Q 045410 194 ALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFV-DMAKVITASCRKRKVNLGQASGNSL 272 (589)
Q Consensus 194 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (589)
|..++|.+++++.+..||++.|++.++..++..+..+...++.+++ ++.++.+ +..+
T Consensus 140 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------------------- 197 (365)
T TIGR00900 140 FYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA-SEIQALSNAVLR--------------------- 197 (365)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccccccchhHHH---------------------
Confidence 9999999999999989999999887665554444333322111000 0000000 0000
Q ss_pred cCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHH-HHHHHHHHHHhh
Q 045410 273 YDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFP-VWITGIFCFLAM 351 (589)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 351 (589)
+..+ .++ ...++ +.+..... .++....+....
T Consensus 198 -----------------------~~~~-------------------~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~ 230 (365)
T TIGR00900 198 -----------------------DTRE-------------------GIK----FVLKN-PLLRTLLLLALLFNLVFAPAI 230 (365)
T ss_pred -----------------------HHHh-------------------HHH----HHHcC-cHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 00000 11111111 111111111111
Q ss_pred hcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHH
Q 045410 352 DQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLV 431 (589)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~ 431 (589)
....+.+.....+.+. ...+.......++.++...+.++ +.+|.++| +.+..+..+.++++++
T Consensus 231 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~-------~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 231 VALFPYVQSKYLGRGS------THYGWVLAAFGLGALLGALLLGL----LGRYFKRM-------ALMTGAIFVIGLAILV 293 (365)
T ss_pred HHHhHHHHHHHhCCch------HHHHHHHHHHHHHHHHHHHHHHH----HHHHhchh-------HHHHHHHHHHHHHHHH
Confidence 1111222111111111 11222233333444444444333 35554332 3555666666666665
Q ss_pred HHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 432 AGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALV 511 (589)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~ 511 (589)
..+.. + +.+...+..++.+++.+...+...++..+.+|++.|+++.|+.++...++..+++.+.
T Consensus 294 ~~~~~---------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 294 VGLTP---------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHhhc---------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55532 1 2445566778888988888999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 045410 512 NIIHG 516 (589)
Q Consensus 512 ~~i~~ 516 (589)
+.+.|
T Consensus 358 g~l~~ 362 (365)
T TIGR00900 358 GPLAD 362 (365)
T ss_pred HHHHH
Confidence 98875
No 32
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=4.5e-22 Score=214.45 Aligned_cols=172 Identities=14% Similarity=0.007 Sum_probs=130.4
Q ss_pred HHHHHHHHHhHhhh---HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 35 LGNETFEKLASMSL---IANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 35 ~~~~~~~~~~~~~~---~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+...++....+|.. ..+..+|+.++ |+++.+.+++.+++.++..++++++|+++|| +|||++++.+.++.+++.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i~~~ 108 (452)
T PRK11273 31 FLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAAVML 108 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHHHHH
Confidence 33444444444433 23455678777 9999999999999999999999999999999 5999999999999999888
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
.+++..... .+.+.+++.|++.|++.+...+.....+.|++|+ ++|++.+++++.+.
T Consensus 109 ~~~~~~~~~-----------------~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~ 165 (452)
T PRK11273 109 FMGFVPWAT-----------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ------KERGGIVSVWNCAH 165 (452)
T ss_pred HHHhhhccc-----------------ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh------HHHHHHHHHHHHHH
Confidence 887753111 1566788899999999999888888899999886 45888899988888
Q ss_pred HHHHH-HHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 192 TVALV-VALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 192 ~~g~~-~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
++|+. .+|+++..+....+||+.|++.+++.++..++.++
T Consensus 166 ~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 166 NVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 88864 45554434434458999999877655554433333
No 33
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=6.4e-22 Score=216.10 Aligned_cols=179 Identities=11% Similarity=0.030 Sum_probs=133.1
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHh-----cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTK-----YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY 101 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 101 (589)
+++....+....+.+......+...++ .+.++ .+.++.+.+++.+.+.++..++.++.|+++|| +|||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHH
Confidence 334444444455555555433333333 33322 34567788999999999999999999999999 599999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLE 181 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (589)
+.+++.++.++++++.+... ..+.+.++++|+++|++.|...+..+.++.|.+|+ +.|+
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~---------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~------~~Rg 150 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSP---------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK------KWRG 150 (502)
T ss_pred HHHHHHHHHHHHHHccCccc---------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh------hhHH
Confidence 99999999988887541000 01367899999999999999999999999999997 4588
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------hcchhHhHHHHHHHHHHHHHH
Q 045410 182 SFFNWWYFSFTVALVVALTAVVYIQT-----------------------NVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~~~~l~~-----------------------~~g~~~~f~~~~~~~~i~~~~ 228 (589)
+..++.+....+|..+++.++.++.. .++||+.|.+..+..++.++.
T Consensus 151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999888766532 247999998776655544333
No 34
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=1.6e-22 Score=218.36 Aligned_cols=143 Identities=21% Similarity=0.225 Sum_probs=120.6
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHH
Q 045410 62 MDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLS 141 (589)
Q Consensus 62 ~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 141 (589)
.+..+.+++.+++.++..++.++.|+++|| +|||++++.+.+++.++..++.+.... .+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ 128 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAFA------------------LSVE 128 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhccc------------------cchH
Confidence 338999999999999999999999999999 599999999999999998888765411 1346
Q ss_pred HHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH---HHHHhhcchhHhHHHH
Q 045410 142 ILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAV---VYIQTNVSWILGFAIP 218 (589)
Q Consensus 142 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~---~~l~~~~g~~~~f~~~ 218 (589)
.++++|+++|++.+...+...+++.|.+|+ +.|++.+++++.+.++|..+++.++ +...+..+||+.|++.
T Consensus 129 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~------~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~ 202 (481)
T TIGR00879 129 MLIVGRVLLGIGVGIASALVPMYLSEIAPK------ALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQ 202 (481)
T ss_pred HHHHHHHHHHhhhhHHHhHHHHHHHccCCh------hhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHH
Confidence 799999999999999999999999999986 3477789999999999999999988 6665678999999986
Q ss_pred HHHHHHHHHHH
Q 045410 219 TGCFFLSIVVF 229 (589)
Q Consensus 219 ~~~~~i~~~~~ 229 (589)
++..++.++..
T Consensus 203 ~~~~~~~~~~~ 213 (481)
T TIGR00879 203 LIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHH
Confidence 65555444433
No 35
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.92 E-value=1.5e-22 Score=218.21 Aligned_cols=151 Identities=14% Similarity=0.074 Sum_probs=126.2
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 045410 52 MTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQ 131 (589)
Q Consensus 52 l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 131 (589)
+.+.+.+++|.+..+.+++.+.+.+...++.++.|+++|| +|||++++.+.++..++.++++++.
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~-------------- 105 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSS-------------- 105 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhh--------------
Confidence 3455668999999999999999999999999999999999 5999999999999999998888866
Q ss_pred CCCCCchhHHHHHH-HHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045410 132 CPQPEGWQLSILYA-GLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 132 ~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
+.+.+++ .|++.|++.+...+...+++.+.++ ++|++..++.+.+.++|..++|.+++++.+.+|
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-------RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-------hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 5555654 5688999998776777788888875 247788999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHH
Q 045410 211 WILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~~~~ 231 (589)
||+.|++.+++.++..+..++
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999987766555444333
No 36
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=9e-23 Score=220.82 Aligned_cols=181 Identities=12% Similarity=0.004 Sum_probs=137.7
Q ss_pred CchHHHHHHHHHHHHHHhHhhhH---HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLI---ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGS 103 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 103 (589)
..|..+.++...++..+..|... ....+.+.+++|+++.+.|++.+.+.+++.++++++|+++||+ |||+++..+.
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~ 101 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLL 101 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHH
Confidence 33444545555555555545333 3345667889999999999999999999999999999999995 9999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 104 IASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 104 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
++++++.+.+++.... ...+.+.+++.|+++|++.+...|...+++.|++|++ +|++.
T Consensus 102 ~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~rg~a 159 (467)
T PRK09556 102 ILSAICMLGFGASLGS----------------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR------KRGRF 159 (467)
T ss_pred HHHHHHHHHHHHHHhc----------------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc------ceeee
Confidence 8888877766653100 0126788999999999999999999999999999973 46677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc---chhHhHHHHHHHHHHHHHHHH
Q 045410 184 FNWWYFSFTVALVVALTAVVYIQTNV---SWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~~~~l~~~~---g~~~~f~~~~~~~~i~~~~~~ 230 (589)
++++..+.++|..+++.+..++.+.. +|+..|.+.+++.++..++.+
T Consensus 160 ~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 160 LGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred EEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 88888889999999998887776643 588888776665544433333
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=1.9e-22 Score=210.76 Aligned_cols=354 Identities=11% Similarity=0.072 Sum_probs=222.7
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045410 49 IANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCT 128 (589)
Q Consensus 49 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 128 (589)
.+.+.+++.+++|++..+.+++.+++.++..+++++.|+++|| +|||+++..+.++..++.+.+++++
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~~~----------- 89 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAIAD----------- 89 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHHHH-----------
Confidence 4556778888999999999999999999999999999999999 5999999999999999999999887
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 129 GAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN 208 (589)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 208 (589)
+.+.++++|++.|++.+...+.....+.+.+|+ +|++..+++..+.++|..+++.+.+.+.+.
T Consensus 90 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (377)
T TIGR00890 90 ----------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLITSVINL 152 (377)
T ss_pred ----------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHHHHHhc
Confidence 788899999999999998888888888888763 366788888888889988776677777777
Q ss_pred cchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCCcccccccccc
Q 045410 209 VSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTK 288 (589)
Q Consensus 209 ~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (589)
.+||+.|++.+++.++..+..+...++.++++.+ + +. +.. .
T Consensus 153 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~---~~~-------~------------ 193 (377)
T TIGR00890 153 EGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIK-T----------------NI---EVS-------V------------ 193 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHheecCchhccc-c----------------Cc---ccc-------h------------
Confidence 8999999987776655544433332211100000 0 00 000 0
Q ss_pred CCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhcccc
Q 045410 289 LPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKR 368 (589)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (589)
+..+. + +..++. .........................+. +..+.+.
T Consensus 194 ----~~~~~----------------------~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 239 (377)
T TIGR00890 194 ----KDYTV----------------------W-----EMLRTP-QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSD- 239 (377)
T ss_pred ----hhhhH----------------------H-----HHHcCc-cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCH-
Confidence 00000 0 000000 011111111111111100111111111 1111111
Q ss_pred cCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Q 045410 369 FGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGS 448 (589)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~ 448 (589)
.....+..+..+..++..++.+++ .||+++| +.+.++..+..++.+++.+..
T Consensus 240 -----~~~~~~~~~~~~~~~~~~~~~g~l----~dr~g~~-------~~~~~~~~~~~~~~~~~~~~~------------ 291 (377)
T TIGR00890 240 -----GFLVLAVSISSIFNGGGRPFLGAL----SDKIGRQ-------KTMSIVFGISAVGMAAMLFIP------------ 291 (377)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhh-------hhhhHHHHHHHHHHHHHHHcc------------
Confidence 112233344445555555665555 5665443 245667777777766555432
Q ss_pred CCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 045410 449 FESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLG 528 (589)
Q Consensus 449 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~ 528 (589)
.......+....+.+++.+...+....+..|.+|++.|+++.|+.+....+|+.+++.+.+.+.+..
T Consensus 292 ---~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~---------- 358 (377)
T TIGR00890 292 ---MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI---------- 358 (377)
T ss_pred ---cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh----------
Confidence 1122222233445555555556666788899999999999999999999999999999999887532
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHH
Q 045410 529 GTDLNKDTLDYFYFTIAALEVVNL 552 (589)
Q Consensus 529 ~~~~~~~~~~~~f~~~a~~~~~~~ 552 (589)
++.+.|.+.+++.++++
T Consensus 359 -------g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 359 -------GFEYTFIVTGAFALTSL 375 (377)
T ss_pred -------chhhHHHHHHHHHHHhc
Confidence 13456666666665543
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.9e-21 Score=206.69 Aligned_cols=158 Identities=15% Similarity=0.058 Sum_probs=130.5
Q ss_pred HhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 045410 43 LASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKL 122 (589)
Q Consensus 43 ~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~ 122 (589)
++...+.+.++ .+.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||+++.+.++..++...+.++.
T Consensus 27 ~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----- 99 (406)
T PRK15402 27 IANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ----- 99 (406)
T ss_pred hhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc-----
Confidence 33333444444 45678999999999999999999999999999999995 999999999999999888887766
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 045410 123 RPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAV 202 (589)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 202 (589)
+.+.+++.|+++|++.+...+...+++.|.+|+ +.|.+.+++.+....+|..++|.++
T Consensus 100 ----------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~i~ 157 (406)
T PRK15402 100 ----------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEE------ADAIKITALMANVALLAPLLGPLVG 157 (406)
T ss_pred ----------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhCh------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667789999999999998888999999999986 3355667777777788999999999
Q ss_pred HHHHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 203 VYIQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 203 ~~l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
+++.+..+||+.|++.++..++..+..
T Consensus 158 ~~l~~~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 158 AALIHVLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 999988899999988776655554433
No 39
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=1.7e-21 Score=208.75 Aligned_cols=173 Identities=13% Similarity=0.167 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcC---CchhHHHHHHHHH---HHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYN---MDGILLVNVVSIW---GGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~~~~~~---~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+....+..+++.+..+. .+++.+++.++++ .+..+.+.+.+++ .++..++.+++|+++||+ ||||++..+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~ 101 (432)
T PRK10406 24 IVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHH
Confidence 33333456666666444 6777788888874 5566544444444 444459999999999995 99999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+++++++.++++++.... ...++..+++.|+++|++.|...|...+++.|.+|++ +|++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~------~rg~~~ 162 (432)
T PRK10406 102 MMCFGSLVIACLPGYETI-------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG------RKGFYA 162 (432)
T ss_pred HHHHHHHHHhhcCCchhH-------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC------cccHHH
Confidence 999999999886632110 0013457899999999999999999999999999873 366677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------hhcchhHhHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQ--------TNVSWILGFAIPTGCFFL 224 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~--------~~~g~~~~f~~~~~~~~i 224 (589)
++.+.+.++|..+++.+...+. +.+|||++|++.++..++
T Consensus 163 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 163 SFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 7777788888888877655544 257999999986665443
No 40
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=1.1e-21 Score=205.75 Aligned_cols=170 Identities=13% Similarity=0.082 Sum_probs=134.2
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHH-HHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY-GSIASFLGMGIMT 114 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~-~~~~~~~~~~~~~ 114 (589)
+..++..++.....+.++.|+.+++|.++.+.+++.+.+.+...+..++.|+++||+ ||||.++. +.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 457778888888889999999999999999999999999999999999999999995 99987665 4555556666777
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHH
Q 045410 115 LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVA 194 (589)
Q Consensus 115 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (589)
+++ +++.+++.|++++.+.+...|...++..|..|++. +.+....+..+...++|
T Consensus 83 ~~~---------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g 137 (375)
T TIGR00899 83 WNR---------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG----REAVMFSSVMRAQISLA 137 (375)
T ss_pred hcc---------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc----hhhHHHHHHHHHHHhHH
Confidence 655 66778888988888878788888888888765421 12223356667778899
Q ss_pred HHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 195 LVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
..++|.+++++.+.++||+.|++.++..++..+..++
T Consensus 138 ~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 138 WVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999899999999877765555444333
No 41
>PRK09952 shikimate transporter; Provisional
Probab=99.92 E-value=1.3e-21 Score=209.96 Aligned_cols=178 Identities=11% Similarity=0.109 Sum_probs=129.0
Q ss_pred CCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhc--CCchhHHHHHH-----HHHHHHHHhhhhhhhHHhhhcccch
Q 045410 24 PKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKY--NMDGILLVNVV-----SIWGGSSSLTAIPGALLSDTYLGRF 96 (589)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g~s~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Grr 96 (589)
...++|..+...+..+++......+....+.++.+++ +.++.+ +++. ++..++..++.++.|+++||+ |||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr 94 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRK 94 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccH
Confidence 3445666666666777777776554445555666655 677663 5443 234455678888899999995 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCc
Q 045410 97 RTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKG 176 (589)
Q Consensus 97 ~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 176 (589)
++++.+.+++++++++++++++.... ...++..++++|+++|++.|...+....++.|.+|++
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~---- 157 (438)
T PRK09952 95 RMLMLTVWMMGIATALIGLLPSFSTI-------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN---- 157 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHH-------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC----
Confidence 99999999999999999997632210 0001236888999999999999999999999999873
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--------hcchhHhHHHHHHHH
Q 045410 177 KSQLESFFNWWYFSFTVALVVALTAVVYIQT--------NVSWILGFAIPTGCF 222 (589)
Q Consensus 177 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------~~g~~~~f~~~~~~~ 222 (589)
+|+...+....+..+|..++..+..++.. .+|||++|++.++..
T Consensus 158 --~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 158 --KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 35666777777778888888766666542 479999998876553
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.92 E-value=3e-22 Score=217.62 Aligned_cols=392 Identities=13% Similarity=0.098 Sum_probs=239.1
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
..+....++..+.. .+.....+++.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.++.+.+++.++.+
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 5 IVLMLGTFMAVLDS-TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHH
Confidence 33444555555553 344555566778999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
+++++. +.+.++++|+++|++.+...+...+++.|.+|+ ++|++.+++++...
T Consensus 83 ~~~~~~---------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~------~~r~~~~~~~~~~~ 135 (485)
T TIGR00711 83 LCGVAP---------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP------EKRGRAMAIWGLTV 135 (485)
T ss_pred HHhCcC---------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH------HHHHHHHHHHHHHH
Confidence 988876 677899999999999999999999999999986 45788999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHH-H-----HHHHHhccccccC
Q 045410 192 TVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAK-V-----ITASCRKRKVNLG 265 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~ 265 (589)
.+|..++|.+++++.++++||+.|++...+.++..++..+..++.++.+.++.+...... . ......++..
T Consensus 136 ~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~--- 212 (485)
T TIGR00711 136 LVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPE--- 212 (485)
T ss_pred HHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCC---
Confidence 999999999999999999999999987766555554444443322111111111110000 0 0000010000
Q ss_pred CCCCCCccCCCCCccccccccccCCCCcchhhh-hh------hhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHH
Q 045410 266 QASGNSLYDPPLTQSETESKTTKLPHTNRFRCL-DK------AAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMF 338 (589)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 338 (589)
. -|..+. ...... .. ....+..+ .....+++.++ +.+.....+
T Consensus 213 -~----~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~ 262 (485)
T TIGR00711 213 -R----GWFDSN---------------EILILSITGLVAIIAFVVWELTD-----DNPLVDLRLFK-----YRNFTIGCV 262 (485)
T ss_pred -C----CCCCch---------------HHHHHHHHHHHHHHHHHHHHHcC-----CCCccCHHHHc-----CCChHHHHH
Confidence 0 000000 000000 00 00000000 00001111111 111111111
Q ss_pred HHHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHH
Q 045410 339 PVWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRI 418 (589)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i 418 (589)
..++....++... .+.+.+.....+.+. ...+.......++.+++.++.+++ .+|.++ ++.+
T Consensus 263 ~~~~~~~~~~~~~-~~~p~~~~~~~g~s~------~~~g~~~~~~~~~~~~~~~~~g~l----~~r~~~-------~~~~ 324 (485)
T TIGR00711 263 YMSLLGLGLYGSF-YLLPLYLQQVLGYTA------LQAGLHILPVGLAPMLSSPIAGRM----GDKIDP-------RKLV 324 (485)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHHHHHHHH----HhhcCc-------HHHH
Confidence 1111111111111 111112111111111 112233333444555555554444 555543 3466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHH
Q 045410 419 TIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFL 498 (589)
Q Consensus 419 ~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 498 (589)
.+|..+.+++++++.+.. ....+.+..+...++.+++.+...+.......+..|++.|+++.|+.++
T Consensus 325 ~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 391 (485)
T TIGR00711 325 TIGLILYAVGFYWRAFTF-------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNF 391 (485)
T ss_pred HHHHHHHHHHHHHHhccC-------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHH
Confidence 778877777777665321 0023444555567888999888887777888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 045410 499 SLSISSYINSALVNIIHG 516 (589)
Q Consensus 499 ~~~lg~~l~~~l~~~i~~ 516 (589)
.+.+|+.+|+.+.+.+.+
T Consensus 392 ~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 392 TRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998775
No 43
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.92 E-value=1.1e-21 Score=209.79 Aligned_cols=166 Identities=12% Similarity=0.157 Sum_probs=142.8
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.+++......+..+.+.+..+. ..++.+++.+++|.++.+.+++.+++.++..++.++.|+++|| +|||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFML-IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHH
Confidence 3455555555666666666554 4556667788999999999999999999999999999999999 5999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..++.++++++. +.+.++++|++.|++.+...+....++.|.+|+ ++|++..+
T Consensus 93 ~~~~~~~~~~~~---------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~------~~r~~~~~ 145 (426)
T PRK12307 93 YSVGTGLSGLAS---------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPK------HLKSKASA 145 (426)
T ss_pred HHHHHHHHHHHh---------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH------hHhhHhhh
Confidence 999999988877 778899999999999999999999999999986 45778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTG 220 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~ 220 (589)
++..+..+|.++++.+.+.+.+..+||+.|++...
T Consensus 146 ~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 146 FLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 98889999999999999999888999999987543
No 44
>PRK03699 putative transporter; Provisional
Probab=99.92 E-value=2.4e-21 Score=205.08 Aligned_cols=173 Identities=12% Similarity=0.108 Sum_probs=141.8
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
.+++|..+...+..++.....+.....++ .+.+++|+|.++.+++.+.+.++..++.+++|+++|| +|||++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMG-PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 35677777777777776666554444444 4667899999999999999999999999999999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+..++.+++.+++ +.+.++++|+++|++.+...+...+++.|.+|+ ++|+..+
T Consensus 81 ~~~i~~~l~~~~~---------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~------~~r~~~~ 133 (394)
T PRK03699 81 LMILAVAGLMFSH---------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEG------KQRGSRL 133 (394)
T ss_pred HHHHHHHHHHHcc---------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhccc------chHHHHH
Confidence 9999998888866 678899999999999999999999999999975 3466777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hcchhHhHHHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQT-NVSWILGFAIPTGCFFLSI 226 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~i~~ 226 (589)
+..+....+|+.++|.+.+.+.. ..+||+.|.+.+++.++..
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIF 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 77777788888899988887764 5799999987666554443
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.91 E-value=8.3e-22 Score=214.97 Aligned_cols=167 Identities=12% Similarity=0.158 Sum_probs=143.0
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+.+|+.+..+....++..+..+ ....+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFV-LITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 3456655555566666666544 455555677789999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+..++.+.+.++. +.+.++++|++.|++.+...+...+++.|.+|+ +.|++.+
T Consensus 94 ~~~~~~~~~~~~~---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~ 146 (496)
T PRK03893 94 LFSVGTLACGFAP---------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK------HLRNKAS 146 (496)
T ss_pred HHHHHHHHHHHHh---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH------HHHHHHH
Confidence 9999999988876 778899999999999999999999999999986 4578888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTG 220 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~ 220 (589)
++++...++|..+++.+.+++.+.++||+.|++...
T Consensus 147 ~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 147 GFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL 182 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 999999999999999999999999999999886443
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=4.3e-21 Score=207.68 Aligned_cols=148 Identities=10% Similarity=0.066 Sum_probs=128.4
Q ss_pred hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCch
Q 045410 59 KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGW 138 (589)
Q Consensus 59 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 138 (589)
+++++..+.|++.+.+.+++.++++++|+++|| +|||+++..+.++.+++.+++.++.. .
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~-------------------~ 129 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAAG-------------------G 129 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHH-------------------c
Confidence 689999999999999999999999999999999 59999999999998888877765431 1
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-chhHhHHH
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNV-SWILGFAI 217 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~f~~ 217 (589)
+.+.+++.|+++|++.+...|....++.|++|+ ++|++.+++++.+.++|..+++.+++++.+.+ |||+.|++
T Consensus 130 ~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i 203 (465)
T TIGR00894 130 GIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP------KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYV 203 (465)
T ss_pred CchHHHHHHHHHHHhcccchhhHHHHHHhcCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhh
Confidence 356789999999999999999999999999986 56889999999999999999999999999884 99999999
Q ss_pred HHHHHHHHHHHHHHh
Q 045410 218 PTGCFFLSIVVFLIG 232 (589)
Q Consensus 218 ~~~~~~i~~~~~~~~ 232 (589)
.++..++..++.+..
T Consensus 204 ~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 204 FGIVGCAWSLLWFVF 218 (465)
T ss_pred hhHHHHHHHHHHHHH
Confidence 877666555544443
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=7.7e-21 Score=200.32 Aligned_cols=170 Identities=15% Similarity=0.125 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
..+......+......+...+.++ .+.+++|++..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 344555566666666665556554 45678999999999999999999999999999999995 9999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
.+++++++ +.+.+++.|++.|++.+...+....++.|.+|+ ++|++.++++..
T Consensus 82 ~~l~~~~~---------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 134 (382)
T PRK10091 82 NAMFTLSS---------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP------GKVTAAVAGMVS 134 (382)
T ss_pred HHHHHHhC---------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh------HHhhHHHHHHHH
Confidence 99998877 778899999999999999888888888998875 346677888888
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHH
Q 045410 190 SFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~ 228 (589)
+..+|..++|.+++++.+.++||+.|++.++..++..+.
T Consensus 135 ~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 135 GMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999899999999877765544443
No 48
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=4.2e-21 Score=202.33 Aligned_cols=177 Identities=15% Similarity=0.127 Sum_probs=144.2
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.+|+.........+......+ ...+..+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHH
Confidence 345555555555555555443 445556667788999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..++.+++.+.. +.+.+++.|++.|++.+...+...+++.|.+|+ +.|++.++
T Consensus 92 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~r~~~~~ 144 (398)
T TIGR00895 92 FSVFTLLCALAT---------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK------RFRGTAVG 144 (398)
T ss_pred HHHHHHHHHHcc---------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCH------HhhchhHh
Confidence 998888888765 667788999999999999999999999999986 45778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+.+...++|..+++.+++++.+..+|++.|++.+++..+..++...
T Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 145 LMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMR 190 (398)
T ss_pred hHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999899999998875444444333333
No 49
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=3.1e-22 Score=207.41 Aligned_cols=166 Identities=19% Similarity=0.242 Sum_probs=142.9
Q ss_pred HHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHH
Q 045410 35 LGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMT 114 (589)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~ 114 (589)
++..++..+........++.++.+++|.+..+.+++.+++.+...++.++.|+++|| +|||++++.+.++.+++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhh
Confidence 345667777766666777768889999999999999999999999999999999999 5999999999999999966666
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHH
Q 045410 115 LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVA 194 (589)
Q Consensus 115 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (589)
++. +.+.++++|++.|++.+...+...+++.|.+|++ +|++.+++.+...++|
T Consensus 81 ~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g 133 (352)
T PF07690_consen 81 FAS---------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSLG 133 (352)
T ss_dssp HHC---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHHH
T ss_pred hhh---------------------hHHHHhhhccccccccccccccccccccccchhh------hhhhccccccchhhhh
Confidence 644 4558999999999999999999999999999873 4778899999999999
Q ss_pred HHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHH
Q 045410 195 LVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~ 228 (589)
..++|.+++++.+..+||+.|++.+++.++..++
T Consensus 134 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 134 SILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 9999999999998899999999988877766553
No 50
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=5.2e-21 Score=197.66 Aligned_cols=347 Identities=18% Similarity=0.230 Sum_probs=252.0
Q ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHH
Q 045410 33 YILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGI 112 (589)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~ 112 (589)
.+....++..+.++...+.++.|. +++|.+..+.+++.+...+...++.++.|+++|| +|||+.+..+.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHH
Confidence 344567777777777777777776 4679999999999999999999999999999999 59999999999999999998
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHH
Q 045410 113 MTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFT 192 (589)
Q Consensus 113 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 192 (589)
+.+.. +.+.++++|++.|++.+...+...+++.|.+|+ ++|++.+++.+...+
T Consensus 81 ~~~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 133 (352)
T cd06174 81 LAFAS---------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP------KERGRALGLFSAGFG 133 (352)
T ss_pred HHHhc---------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCc------cchhhhhhHHHHHHH
Confidence 88865 678899999999999999999999999999986 347778999999999
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCc
Q 045410 193 VALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSL 272 (589)
Q Consensus 193 ~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (589)
+|..++|.+++.+.+..+|++.|++.....++..+...+..|.
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 176 (352)
T cd06174 134 LGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLRL------------------------------------- 176 (352)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------
Confidence 9999999999999998899999998777666555444332100
Q ss_pred cCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 045410 273 YDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMD 352 (589)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 352 (589)
... ..+..+........ +.
T Consensus 177 ----------------------------------------------------------~~~--~~~~~~~~~~~~~~-~~ 195 (352)
T cd06174 177 ----------------------------------------------------------LLL--LALAFFLLSFGYYG-LL 195 (352)
T ss_pred ----------------------------------------------------------HHH--HHHHHHHHHhHHHH-HH
Confidence 000 00000111111111 11
Q ss_pred cchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 045410 353 QQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVA 432 (589)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~ 432 (589)
...+.......+.+. ...+.......+..++..++.+++ .+|.++|+. .+..+..+..++.+..
T Consensus 196 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~------~~~~~~~~~~i~~~~~ 259 (352)
T cd06174 196 TYLPLYLQEVLGLSA------AEAGLLLSLFGLGGILGALLGGLL----SDRLGRRRL------LLLIGLLLAALGLLLL 259 (352)
T ss_pred HHHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhhhH------HHHHHHHHHHHHHHHH
Confidence 111111111111111 123334445555566666665554 666654420 5677788888887777
Q ss_pred HHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 433 GFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVN 512 (589)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~ 512 (589)
.... +.+.......+.+++.+...+....+..|..|++.|++..++.+....+++.+++.+.+
T Consensus 260 ~~~~-----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 260 ALAP-----------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred HHhc-----------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6543 34566677888999999999999999999999999999999999999999999999999
Q ss_pred HhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 045410 513 IIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFN 556 (589)
Q Consensus 513 ~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~ 556 (589)
.+.+.. + +...|.+.+++.+++.++.+
T Consensus 323 ~l~~~~------~-----------~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 323 LLLDTG------G-----------YGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHhccc------C-----------cchHHHHHHHHHHHHHHHhe
Confidence 887521 1 23466777777777665544
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.91 E-value=7e-21 Score=200.55 Aligned_cols=156 Identities=13% Similarity=0.035 Sum_probs=135.3
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
..|.++.+++..++..++...+.+.++.|+. ++|.|..+.|++.+.+.++..+++++.|+++|| +|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHH
Confidence 3456777778888888887777788888876 689999999999999999999999999999999 59999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++...+++++ +.+.++++|+++|++.+...+...+.+.+..++ ++|++.+++
T Consensus 82 ~~~~~~~~~~~---------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 134 (381)
T PRK03633 82 AAGCAGLGLMV---------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS------RNRGRLLAA 134 (381)
T ss_pred HHHHHHHHHhc---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHH
Confidence 99998888876 678899999999999999888888888887765 347788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcch
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
++...++|..+||.+++.+.+...+
T Consensus 135 ~~~~~~~g~~~g~~~~~~l~~~~~~ 159 (381)
T PRK03633 135 YMMVYYLGTVLGQLLVSKVSTELMS 159 (381)
T ss_pred HHHHHHHHHHHHHHHHhcccccccc
Confidence 9999999999999999988765433
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.91 E-value=1.4e-20 Score=199.16 Aligned_cols=176 Identities=12% Similarity=0.133 Sum_probs=125.2
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHH-HHHhhhhhhhHHhhhcccchHHHH-HHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGG-SSSLTAIPGALLSDTYLGRFRTLL-YGSIAS 106 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~-~~~~~~ 106 (589)
++.+..+...++..++.....+.++.|+.+++|.+.++.|++.+...+ ...++++++|+ +||+ ||||.++ .+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~ 92 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLG 92 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHH
Confidence 344555667889999988888999999999999999999999877655 45555655666 9995 9998765 455555
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++..+++++. +.+.+++.+.+.+...+...|....+..|..+++ + +......++
T Consensus 93 ~~~~~~~~~~~---------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 147 (393)
T PRK15011 93 VLACTLFAWNR---------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKT---G-REAVMFSSF 147 (393)
T ss_pred HHHHHHHHHhh---------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhc---c-chHHHHHHH
Confidence 56666666655 5555554444444344566777778777755431 1 112334467
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
.+.+.++|.+++|.+++++.+++|||..|++.++..++..+....
T Consensus 148 ~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 148 LRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 778899999999999999999899999998877665555444333
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=2.6e-20 Score=195.93 Aligned_cols=176 Identities=16% Similarity=0.098 Sum_probs=145.2
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+.+..+.+.+..+...++.....+.+ +++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAF-PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 44445555555555555544444434 456778999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+.+.++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++.+++
T Consensus 81 ~~~~~~~~~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 133 (385)
T TIGR00710 81 ALSSLGLALSN---------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPG------EELSRIYSI 133 (385)
T ss_pred HHHHHHHHHHc---------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc------HHHHHHHHH
Confidence 99999888866 677899999999999999999999999999986 457888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
.+...++|..+++.+++++.+..+|++.|++.++..++..+....
T Consensus 134 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 134 LMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999899999998877665555444433
No 54
>PRK15075 citrate-proton symporter; Provisional
Probab=99.90 E-value=9.5e-21 Score=203.10 Aligned_cols=174 Identities=14% Similarity=0.091 Sum_probs=128.4
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHH-HHHHH-----HHHhhhhhhhHHhhhcccchHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVV-SIWGG-----SSSLTAIPGALLSDTYLGRFRTL 99 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~-~~~~~-----~~~~~~~~~G~laDr~~Grr~~l 99 (589)
.+++......+..+++.+.... ..+..+.+.++++.++.+.+.+. +.... ...+++++.|+++|| +||||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l 89 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFL-FGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGL 89 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHH
Confidence 4566666666777777777554 55566678889999888765443 22222 224678999999999 4999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchh
Q 045410 100 LYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQ 179 (589)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 179 (589)
+.+.+++.++.++++++++...+. ......++++|+++|++.+...+....++.|++|+ ++
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~-------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~------~~ 150 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIG-------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP------GR 150 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHH-------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc------cc
Confidence 999999999999999876221100 00012578999999999999999999999999987 34
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH--------hhcchhHhHHHHHH
Q 045410 180 LESFFNWWYFSFTVALVVALTAVVYIQ--------TNVSWILGFAIPTG 220 (589)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~~~~~~~l~--------~~~g~~~~f~~~~~ 220 (589)
|++.++++....++|..+++.+++.+. +.+|||+.|++...
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 777888888788888888877776653 46799999987543
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=2.4e-20 Score=197.29 Aligned_cols=173 Identities=15% Similarity=0.112 Sum_probs=143.4
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
++.+|..+...+..++..+..+...+.+ +++.+++|+++.+.+++.+++.+...++.++.|+++|| +|||+.++.+.+
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~ 81 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQTIYVPAI-ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMS 81 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHH
Confidence 3477777777777777777655444444 44567899999999999999999999999999999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+..++.+.+.++. +.+.+++.|++.|++.+...+....+..|.++. +++++..
T Consensus 82 ~~~~~~~~~~~~~---------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 134 (394)
T PRK11652 82 IFILGTLVALFAH---------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG------TQLRHAN 134 (394)
T ss_pred HHHHHHHHHHHHc---------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH------HHHHHHH
Confidence 9999888888765 677899999999999988888888888887764 3466778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSI 226 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~ 226 (589)
+++..+..++..++|.+++++.+..|||+.|++.++..++..
T Consensus 135 ~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 135 SLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 888888999999999999999988899999988766544433
No 56
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=5.5e-20 Score=195.76 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=129.1
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q 045410 56 LRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQP 135 (589)
Q Consensus 56 l~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 135 (589)
+.+++|.+..+.++..+++.++..+++++.|+++|| +|||++++.+.+++.++.+.+.+++
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 667899999999999999999999999999999999 5999999999999999999988876
Q ss_pred CchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhH
Q 045410 136 EGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGF 215 (589)
Q Consensus 136 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f 215 (589)
+.+.++++|+++|++.+...+....++.|.+|+ ++|.+.+++++...++|..+||.+++++.+..|||+.|
T Consensus 103 ---~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f 173 (413)
T PRK15403 103 ---SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQ------TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLF 173 (413)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 678899999999999987777777888898886 34667788888899999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 045410 216 AIPTGCFFLSIVVFLI 231 (589)
Q Consensus 216 ~~~~~~~~i~~~~~~~ 231 (589)
++.++..++..+..++
T Consensus 174 ~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 174 AIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9877766655544333
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=4.2e-20 Score=195.40 Aligned_cols=159 Identities=13% Similarity=0.111 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+.+....++..++.......++. +.+++|.++.+.+++.+.+.+.+.++.+++|+++||+ ||||+++++.+++.++.+
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~ 83 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCL 83 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHH
Confidence 34445666666654444444444 3578999999999999999999999999999999995 999999999999998888
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
.+.++. + .++.|+++|++.+...|...+++.|.+|+ ++|+++.++.....
T Consensus 84 ~~~~~~---------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~------~~~~~a~~~~~~~~ 133 (393)
T PRK11195 84 LMLFGI---------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPG------EKLVKANGWMEGST 133 (393)
T ss_pred HHHHHH---------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHH
Confidence 777654 3 26789999999999999999999999986 46888999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQTNVSWILGFAIPTGCFF 223 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~ 223 (589)
++|..+||.++|++.+. .|+..+.+.....+
T Consensus 134 ~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~ 164 (393)
T PRK11195 134 IAAILLGTVLGGALADP-HAEAALAVCALIYL 164 (393)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999999999999884 47766665554433
No 58
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=4.5e-23 Score=209.57 Aligned_cols=184 Identities=12% Similarity=0.104 Sum_probs=162.5
Q ss_pred CCCCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHH
Q 045410 22 QRPKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY 101 (589)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 101 (589)
...+.-++.+..+.+++.+++..-|.+.. ..+-+++.+|++++..|++.+++.+.+.+..|+.|+++||| .||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEee
Confidence 34455666777788899999999887666 44456678999999999999999999999999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLE 181 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (589)
|..++.++.+.++++. .+|++.++|.+.|+|.+...|+++++++|.||+ ..|+
T Consensus 104 G~~iW~~Av~~~~fs~---------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~------~~Rs 156 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSN---------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPD------DKRS 156 (493)
T ss_pred HHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcc------hhhh
Confidence 9999999999999987 899999999999999999999999999999997 4588
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 182 SFFNWWYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
+.++++|+++++|..+|.+++..+....+ |||.|.+.+++.++..++.++..+
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 99999999999999999999988887766 999999988887777666555544
No 59
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=3.7e-21 Score=210.38 Aligned_cols=145 Identities=16% Similarity=0.167 Sum_probs=124.7
Q ss_pred HHHHHhcCCc---hhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 045410 54 VYLRTKYNMD---GILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGA 130 (589)
Q Consensus 54 ~yl~~~lg~s---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 130 (589)
+.+.+++|++ +.+.+++.+++.++..++.++.|+++|| +|||++++++.++..++.++.+++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3456789998 9999999999999999999999999999 5999999999999999999888876
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045410 131 QCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
+++.+++.|++.|++.+...+...+++.|.+|+ +.|+...+++..+..+|.++++.++.++.+
T Consensus 179 --------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 241 (505)
T TIGR00898 179 --------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPK------KQRAIVGTLIQVFFSLGLVLLPLVAYFIPD--- 241 (505)
T ss_pred --------cHHHHHHHHHHHHhhccchHHHHHHHhheecCh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---
Confidence 778899999999999999999999999999987 346677888888888999999988766543
Q ss_pred hhHhHHHHHHHHHHHHHHH
Q 045410 211 WILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~~ 229 (589)
||+.|++.++..++..+..
T Consensus 242 wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 242 WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988776655554444
No 60
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=6.5e-20 Score=194.60 Aligned_cols=168 Identities=8% Similarity=0.101 Sum_probs=134.7
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
-||.+....+.+++...+.+....++++++ +++|.+..+.+++.+.+.++..++.++.|+++|| +||||++..+.++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~ 88 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLW 88 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHH
Confidence 455566666777777787777778888888 5789999999999999999999999999999999 59999999999998
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+.+.... .. ..+.+.+++.|++.|++.+...+...+.+.+.+|+ ++|++++++
T Consensus 89 ~~~~~~~~~~~-~~----------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~------~~~g~~~g~ 145 (402)
T TIGR00897 89 CVGHAAFIVFG-LG----------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ------DNLSSAVGW 145 (402)
T ss_pred HHHHHHHHHHh-cc----------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH------HHHHHHHHH
Confidence 88876653311 00 01567788899999999888777788888888876 457888999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHhhcchhHhHHHHH
Q 045410 187 WYFSFTVAL-VVALTAVVYIQTNVSWILGFAIPT 219 (589)
Q Consensus 187 ~~~~~~~g~-~~~~~~~~~l~~~~g~~~~f~~~~ 219 (589)
++.+.++|. .++|.+++++.+.+||+..++...
T Consensus 146 ~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~ 179 (402)
T TIGR00897 146 FWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSAL 179 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 999999996 589988889888888765555433
No 61
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=5.1e-21 Score=204.30 Aligned_cols=394 Identities=12% Similarity=0.036 Sum_probs=221.0
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+.+..+......++..++++.+.++++.|+.+++|++..+.|.+.+++.+...+++++.|+++|| +||||+++++..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~ 86 (420)
T PRK09528 8 KNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGL 86 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHH
Confidence 34556666667888888888889999999999999999999999999999999999999999999 59999998876666
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++..........+. -....+.+.++.++..+...+...+.+.++.++ . .++++..++.
T Consensus 87 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~g~~~g~ 145 (420)
T PRK09528 87 LVLFGPFFIYVFAPL-----------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER--V--SRRSGFEYGR 145 (420)
T ss_pred HHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH--H--Hhhccccchh
Confidence 554432221110000 000011222222333332222222223232211 0 0224445666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCC
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQ 266 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (589)
.+...++|..++|.+++++.+ .+|++.|++.++..++.+++.+...++.+++ ++. +++ ++
T Consensus 146 ~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~----~~ 205 (420)
T PRK09528 146 ARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKV--------------ANA----LG 205 (420)
T ss_pred hHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhh--------------ccc----hh
Confidence 677789999999999998876 5899999887766655554444332221100 000 000 00
Q ss_pred CCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHH-HHHHHH
Q 045410 267 ASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFP-VWITGI 345 (589)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 345 (589)
.+ ++ ..+.-+...... .+.++.... ......
T Consensus 206 ~~--------~~---------------~~~~~~~~~~l~-------------------------~~~~~~l~l~~~~~~~ 237 (420)
T PRK09528 206 AN--------AS---------------AVSLKDALALLK-------------------------LPKFWFLVLYVIGVAC 237 (420)
T ss_pred cc--------cc---------------cccHHHHHHHcc-------------------------CCCeEeehHHHHHHHH
Confidence 00 00 000000000000 000001111 111111
Q ss_pred HHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHH
Q 045410 346 FCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMA 425 (589)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~ 425 (589)
.+.....+.+.+..... . +.... ....+.+..++.+...++.++.+++ .+|+++|+ .+.++.++.
T Consensus 238 ~~~~~~~~~~~~~~~~~-~-~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l----~dr~g~~~-------~~~~~~~l~ 302 (420)
T PRK09528 238 FYDVFDQQFPNFFASFF-A-TPEQG--TRVFGYLNSFQVFLEALIMFFAPFI----INRIGAKN-------ALLLAGTIM 302 (420)
T ss_pred HHHHHHHHHHHHHHHHH-h-ccCcc--hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCcch-------hhHHHHHHH
Confidence 11111112222221111 0 11110 0011233333444444555554444 77766552 566777777
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHH-HHHHHHHHH
Q 045410 426 ILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAV-FFLSLSISS 504 (589)
Q Consensus 426 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~ 504 (589)
+++.++.++.+ +.+.++...++.+++.....+....++.+..|++.+++..+. +++...+|.
T Consensus 303 ~~~~~l~~~~~-----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 303 AVRIIGSGFAT-----------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA 365 (420)
T ss_pred HHHHHHHHhcc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence 77776666542 344555567777777777777778899999999999988765 677788999
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 505 YINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 505 ~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
.+++.+.|.+.|.. + +...|.+++++.++..++.++..
T Consensus 366 ~ig~~~~G~l~~~~------G-----------~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 366 VFLSTLAGNLYDSI------G-----------FQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHHHHHHHhh------C-----------chHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988743 2 34567777777766665555443
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.90 E-value=7.8e-21 Score=204.00 Aligned_cols=158 Identities=15% Similarity=0.037 Sum_probs=126.9
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTG 129 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 129 (589)
....+++++ +|+++.+.+++.+++.++..++.++.|+++|| +|||+.++.+.++..++.+.+.+..+..
T Consensus 47 ~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 115 (438)
T TIGR00712 47 ALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFVPWAT--------- 115 (438)
T ss_pred HhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhcccccc---------
Confidence 334556665 59999999999999999999999999999999 5999999999999888888776643111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 045410 130 AQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQ-TN 208 (589)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-~~ 208 (589)
.+.+.+++.|++.|++.+...+....++.|.+|+ ++|++.+++++...++|..+++.+.+... ..
T Consensus 116 --------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~------~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 116 --------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQ------SERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred --------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCc------ccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 1456678889999999999989899999999986 34778899999999999999887776644 45
Q ss_pred cchhHhHHHHHHHHHHHHHHHHHh
Q 045410 209 VSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 209 ~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
.+||+.|++.+++.++..+..++.
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHh
Confidence 689999998777665544443333
No 63
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=2.9e-21 Score=211.29 Aligned_cols=423 Identities=12% Similarity=0.100 Sum_probs=250.9
Q ss_pred hhHHHHHHHHHHh-----cCCch--hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcC
Q 045410 47 SLIANMTVYLRTK-----YNMDG--ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASI 119 (589)
Q Consensus 47 ~~~~~l~~yl~~~-----lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~ 119 (589)
+..+.+...+.+. ...+. .+.+++.+++.++..++.++.|+++|+ +|||+.++++.+++.+|.++++++.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4555555555542 12222 455999999999999999999999999 5999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHH
Q 045410 120 PKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVAL 199 (589)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 199 (589)
+.+.++++|++.|+|.|+.....+.+++|..|+ +.|+...+.++...++|..++.
T Consensus 141 -------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~------~~RG~l~~~~~l~~~~Gi~~~~ 195 (513)
T KOG0254|consen 141 -------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPA------HIRGTLVSLYQLFITIGILLGY 195 (513)
T ss_pred -------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCCh------hhhHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999886 4688889999999999999985
Q ss_pred HHHHHHHhh--cchhHhHHHHHHHHHHHHHHHHHhh--ccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCC
Q 045410 200 TAVVYIQTN--VSWILGFAIPTGCFFLSIVVFLIGY--HTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDP 275 (589)
Q Consensus 200 ~~~~~l~~~--~g~~~~f~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (589)
.+ +....+ ++||..+.+..+..++..+.+++.. |++..+.. ...+..+.+ ...+... .++.
T Consensus 196 ~~-~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g---~~~~a~~~l-~~l~g~~---~~~~------- 260 (513)
T KOG0254|consen 196 CI-NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG---RLEEAKRSL-KRLRGLS---PEDV------- 260 (513)
T ss_pred HH-hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC---ChHHHHHHH-HHHhCCC---Ccch-------
Confidence 44 454443 4899888887776666555544321 22111100 111111100 0011100 0000
Q ss_pred CCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcch
Q 045410 276 PLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQN 355 (589)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 355 (589)
. ........... .. .... .....|..+.. ....|+....+.+..++.........++
T Consensus 261 ~----------------~~~~~~~~~~~-~~---~~~~-~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y 317 (513)
T KOG0254|consen 261 E----------------VELELLKIKLL-VE---AEVA-EGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYY 317 (513)
T ss_pred H----------------HHHHHHHHHHH-Hh---hhcc-cccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEee
Confidence 0 00000000000 00 0000 00011211111 1123344434444444443332222233
Q ss_pred hhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 045410 356 TIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFV 435 (589)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~ 435 (589)
.....+....+.+. ....-....++.++.++... + .+|.+|| ..+..|...+.+++++++..
T Consensus 318 ~~~if~~~g~~~~~---~~~~~~~~~v~~~~t~~~~~----l----vd~~gRr-------~lll~s~~~m~~~~~~~~~~ 379 (513)
T KOG0254|consen 318 STTIFKSAGLKSDT---FLASIILGVVNFLGTLVATY----L----VDRFGRR-------KLLLFGAAGMSICLVILAVV 379 (513)
T ss_pred hHHHHHhcCCCCch---HHHHHHHHHHHHHHHHHHHH----H----HHHhccH-------HHHHHhHHHHHHHHHHHHHH
Confidence 33333333222210 01112223333333333322 2 5555554 37888999999999888876
Q ss_pred HHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 436 ERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIH 515 (589)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 515 (589)
.....+... ......+..++..+++.........|..+.+..|.+|.+.|+++.++....+++.+++-........
T Consensus 380 ~~~~~~~~~----~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 380 GVFALYYPN----SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHhccCCC----cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532111100 0112233344445555666666778888889999999999999999999988888877766665554
Q ss_pred hccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH-HHHHHhcccccccccccccch
Q 045410 516 GLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLL-YFNFFACRFVSSNAIGKKESQ 574 (589)
Q Consensus 516 ~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 574 (589)
... + ....|..+++++.+... +.+++.+|+|+++.++.++..
T Consensus 456 ~~~------~-----------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 456 EAL------G-----------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred Hhc------c-----------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 311 0 12356666666666666 788889999999998877644
No 64
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=1.1e-20 Score=197.74 Aligned_cols=151 Identities=18% Similarity=0.104 Sum_probs=130.6
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTG 129 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 129 (589)
....+++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+.++.+.++..++.+++.++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 3445678889999999999999999999999999999999995 999999999999999999998876
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHH-HHHHHHHhh
Q 045410 130 AQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVAL-TAVVYIQTN 208 (589)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~ 208 (589)
+.+.++++|++.|++.+...+...+++.|.+|+ ++|++.+++.+.+.++|..+++ .+++.+.+.
T Consensus 82 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 82 ---------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSR------SERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred ---------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCH------hhheeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 678899999999999999999999999999986 3466778888888999999999 566777777
Q ss_pred cchhHhHHHHHHHHHHHHHH
Q 045410 209 VSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 209 ~g~~~~f~~~~~~~~i~~~~ 228 (589)
.+|++.|++.+++.++..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~ 166 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLI 166 (379)
T ss_pred CCchhHHHHHHHHHHHHHHH
Confidence 89999998877655544333
No 65
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=2.4e-19 Score=190.16 Aligned_cols=146 Identities=17% Similarity=0.112 Sum_probs=125.4
Q ss_pred HHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCC
Q 045410 56 LRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQP 135 (589)
Q Consensus 56 l~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 135 (589)
+.+++|.++.+.+++.+++.++..++.++.|+++|| +|||+.+..+.++..++.+.+.++.
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~------------------ 92 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVE------------------ 92 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 678999999999999999999999999999999999 5999999999999998888888866
Q ss_pred CchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhH
Q 045410 136 EGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGF 215 (589)
Q Consensus 136 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f 215 (589)
+.+.+++.|+++|++.+...+...+++.|.+|++ ++.+.++..+...++|..++|.+++++.+.+|||+.|
T Consensus 93 ---~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~ 163 (401)
T PRK11043 93 ---SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIF 163 (401)
T ss_pred ---CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHH
Confidence 6677899999999998888888888999998862 3556677777778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 045410 216 AIPTGCFFLSIVVF 229 (589)
Q Consensus 216 ~~~~~~~~i~~~~~ 229 (589)
++..+..++..+..
T Consensus 164 ~~~~~~~~~~~~~~ 177 (401)
T PRK11043 164 ATLFAITLLLILPT 177 (401)
T ss_pred HHHHHHHHHHHHHH
Confidence 88766655544433
No 66
>PRK10133 L-fucose transporter; Provisional
Probab=99.88 E-value=2.5e-19 Score=191.94 Aligned_cols=163 Identities=13% Similarity=0.073 Sum_probs=125.0
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchH
Q 045410 18 PPDSQRPKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFR 97 (589)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~ 97 (589)
.+|...++++...+..+..+-+...+... ....+.+.+++++|.++.+.+++.+.+.+++.+++++.|+++||+ ||||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~ 92 (438)
T PRK10133 15 DKDAGQSRSYIIPFALLCSLFFLWAVANN-LNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKA 92 (438)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHH
Confidence 34444445566666656556666666644 444455556899999999999999999999999999999999995 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcc
Q 045410 98 TLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGK 177 (589)
Q Consensus 98 ~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 177 (589)
++..+.++++++.+++...... .+.+.++++|+++|+|.|...+..++++.|..|+
T Consensus 93 ~l~~g~~~~~~~~~l~~~~~~a------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~------ 148 (438)
T PRK10133 93 GIITGLFLYALGAALFWPAAEI------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE------ 148 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh------
Confidence 9999999999999876422100 1678899999999999999999999999986543
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 178 SQLESFFNWWYFSFTVALVVALTAVVYIQ 206 (589)
Q Consensus 178 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 206 (589)
++|...++.+.....+|..+++.+++.+.
T Consensus 149 ~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 149 SSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333467777778888888888776543
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=2.9e-19 Score=188.35 Aligned_cols=364 Identities=12% Similarity=0.034 Sum_probs=221.1
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH-HHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF-LGM 110 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~-~~~ 110 (589)
+.+....++...++....++++.|+. ++|+|..+.|++.+++.+...+++++.|.++||+ ||++.......+.. +..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 33445566666665555677888884 7899999999999999999999999999999995 98654432222111 111
Q ss_pred H-HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 111 G-IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 111 ~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
+ .+..++ +.+.+++.|++++.+.+...|...++..+. + ++|++.++....
T Consensus 85 ~~~~~~~~---------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-------~~~~~~~g~~~~ 135 (382)
T TIGR00902 85 AAFSAGAH---------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-------KQFGLDYGKVRL 135 (382)
T ss_pred HHHHHhhh---------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-------HHcCCCccHHHH
Confidence 1 222333 678899999999999988888888876552 2 234556888888
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCC
Q 045410 190 SFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASG 269 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (589)
..++|.+++|.+++++.+.+|||..|++......+.+ ..+...++. +++++.. +++
T Consensus 136 ~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~---~~~~~~~-------------------~~~- 191 (382)
T TIGR00902 136 IGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTI---PPKDAIP-------------------EDE- 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCC---CCCcccc-------------------ccc-
Confidence 8999999999999999999999999887654432222 222221110 1100000 000
Q ss_pred CCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHH-HHHHHHHHHH
Q 045410 270 NSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMF-PVWITGIFCF 348 (589)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 348 (589)
. .. ...+ .+..++ |+.+... ..++....+.
T Consensus 192 -------~--------------~~-----------------------~~~~----~~~l~~-~~~~~~l~~~~l~~~~~~ 222 (382)
T TIGR00902 192 -------S--------------QG-----------------------DSAF----IALLKN-PMNLRFLAAVCLIQGAHA 222 (382)
T ss_pred -------c--------------cc-----------------------chhH----HHHHcC-hHHHHHHHHHHHHHHHHH
Confidence 0 00 0000 000011 1111111 1111112221
Q ss_pred HhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 045410 349 LAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILS 428 (589)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~ 428 (589)
..+. +.+.+. +..+.+.. ..+....+..+..++...+ .+++.+|+ +.++.+.++.++..+.
T Consensus 223 ~~~~-~~~~~l-~~~g~s~~------~~g~l~~~~~~~~i~~~~~----~~~l~~r~-------g~~~~l~~~~~~~~~~ 283 (382)
T TIGR00902 223 AYYG-FSAIYW-QAAGISAS------ATGLLWGIGVLAEIIIFAF----SNKLFQNC-------SARDLLLISAIACVGR 283 (382)
T ss_pred HHHH-HHHHHH-HHCCCCHh------HHHHHHHHHHHHHHHHHHH----hHHHHhhC-------CHHHHHHHHHHHHHHH
Confidence 1111 111111 11111111 1122222233333333333 33345554 4455788899999988
Q ss_pred HHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHH-HHHHHHHHHH
Q 045410 429 LLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFF-LSLSISSYIN 507 (589)
Q Consensus 429 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~l~ 507 (589)
...+.+.+ +.+.++...++.++..+...+....++.+. |++.|++++++++ +..++|..++
T Consensus 284 ~~~~~~~~-----------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g 345 (382)
T TIGR00902 284 WAIIGAIE-----------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIF 345 (382)
T ss_pred HHHHHhHh-----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHH
Confidence 88777653 455666678999999999999999999988 9999999999986 4668999999
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 045410 508 SALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLY 554 (589)
Q Consensus 508 ~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~ 554 (589)
+.++|.+.|.. + ...|+..++++++++++
T Consensus 346 ~~~~G~l~~~~---------g---------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 346 TAFAGFIYPTL---------G---------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHhc---------c---------HHHHHHHHHHHHHHHHH
Confidence 99999988632 1 14567777777766544
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=3.8e-19 Score=188.03 Aligned_cols=169 Identities=14% Similarity=0.102 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
...+...+....+.+...+.++. +.+++|.+..+.+++.+.+.++..++.++.|+++|| +|||+.++.+.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHH
Confidence 33445666666665555554444 556899999999999999999999999999999999 5999999999999999988
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
.+..+. +.+.++++|+++|++.+...+...+++.|.+|+ ++|++.+++.+...
T Consensus 84 ~~~~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~------~~r~~~~~~~~~~~ 136 (392)
T PRK10473 84 LCSLAE---------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD------RRRAKVLSLLNGIT 136 (392)
T ss_pred HHHHhC---------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHH
Confidence 888765 567788999999999999899999999999986 45888899998899
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
++|..++|.+++++.+..+|++.|++.++..++..+..
T Consensus 137 ~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 137 CIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888899999988776555444443
No 69
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2e-20 Score=196.89 Aligned_cols=400 Identities=13% Similarity=0.098 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 045410 68 VNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGL 147 (589)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (589)
+.+++++.++.+++++++|+++||+ |||..+.++.++..++.+++.++...+ +..+++.+|
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~------------------~~e~li~GR 123 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP------------------SFEMLILGR 123 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh------------------hHHHHHHHH
Confidence 5678899999999999999999995 999999999999999988888876322 678999999
Q ss_pred HHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH-HHHH-hhcchhHhHHHHHHHHHHH
Q 045410 148 ALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAV-VYIQ-TNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 148 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~~l~-~~~g~~~~f~~~~~~~~i~ 225 (589)
++.|+..|......+-++.|..|++ -|+..-.....+.++|-+++..++ ..+. +.-.|++.+.+..+..++.
T Consensus 124 ~i~Gl~~gl~~~~~pmyl~E~sP~~------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~ 197 (485)
T KOG0569|consen 124 LIVGLACGLSTGLVPMYLTEISPKN------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQ 197 (485)
T ss_pred HHHHHHhHHHHHHHHHHHhhcChhh------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHH
Confidence 9999999999999999999999974 466666667777888888775443 2222 3345988888877776666
Q ss_pred HHHHHHhh--ccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhh-h-hh
Q 045410 226 IVVFLIGY--HTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCL-D-KA 301 (589)
Q Consensus 226 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 301 (589)
++.+.+.. |++.-.. +++. +||..++......++..... + ..
T Consensus 198 l~~l~~~PESPk~Ll~~--k~~~--------------------------------~~A~~sl~~y~G~~~~~~~~e~~~~ 243 (485)
T KOG0569|consen 198 LALLPFLPESPKYLLIK--KGDE--------------------------------EEARKALKFYRGKEDVEAEIEEMLR 243 (485)
T ss_pred HHHHhcCCCCcchHHHH--cCCH--------------------------------HHHHHHHHHHhCCCcchhHHHHHHH
Confidence 55554432 1211110 0111 11111111111111100000 0 00
Q ss_pred hhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccch
Q 045410 302 AVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGL 381 (589)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (589)
...... . ++......++.+.+. ..++.+...+.+.+.+..-......+++..+....+++.+. ....+...+.
T Consensus 244 e~~~~~--~-~~~~~~sl~~~~~~~--~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~--a~~an~~~g~ 316 (485)
T KOG0569|consen 244 EIEEEE--L-EKKKQISLRQLLKNP--TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEE--AQYANLGIGI 316 (485)
T ss_pred HHHHhc--c-ccccCCcHHHHhcCc--chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHH--HHHHHHHHHH
Confidence 000000 0 000001111111111 11222333333333333322222222222222222222111 0011111222
Q ss_pred hhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHH
Q 045410 382 ISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQ 461 (589)
Q Consensus 382 i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 461 (589)
++.+..+++.. +.+|.+||+ .+..++.++.+..+++.......... ....++..++..
T Consensus 317 v~~~~t~~~~~--------lid~~gRRp-------Lll~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 317 VNLLSTLVSPF--------LIDRLGRRP-------LLLISLSLMAVALLLMSIALFLSNSF-------GSWLSYLCIAAI 374 (485)
T ss_pred HHHHHHHHHHH--------HHHhcCCcH-------HHHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHH
Confidence 33333333333 367776653 67777777777776666554211100 000111112233
Q ss_pred HHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHH
Q 045410 462 FSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFY 541 (589)
Q Consensus 462 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f 541 (589)
+.+.........|..+-+..|.+|++.|+.++++..+.+++.+++-....+.+.+..+ .++|
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g------------------~~~f 436 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG------------------PYVF 436 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------chhh
Confidence 3334444555688899999999999999999999999999999999988888875331 2578
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccc
Q 045410 542 FTIAALEVVNLLYFNFFACRFVSSNAIGKKES 573 (589)
Q Consensus 542 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (589)
..+++.+++..++.++..||+|+++..++.+.
T Consensus 437 ilF~i~~~~~~i~~~~~lPETkgr~~~eI~~~ 468 (485)
T KOG0569|consen 437 ILFVIPLAIFLIYLYRYLPETKGRTPYEIIEE 468 (485)
T ss_pred HHHHHHHHHHHHHHHHhCcccCCCCHHHHHHH
Confidence 89999999999999999999999988776544
No 70
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.87 E-value=9.4e-19 Score=185.13 Aligned_cols=152 Identities=13% Similarity=0.073 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHH-hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRT-KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
|.++. ....|...|....+.+.+..++.+ ++|+|++|.+++.+++.+.+.+++++.|++.||+ |.|+++.++.++++
T Consensus 34 r~l~~-s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWI-SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 44443 334444445545556666666655 7999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
+.++.++++...+ ..+++.+++.|++.|++ +...+.....++++||+ ++|+++++++
T Consensus 112 i~~~~~~~a~~~~----------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~------~~rG~A~Gi~ 168 (462)
T PRK15034 112 IPCVWLGIAVQNP----------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPK------AKQGSALGIN 168 (462)
T ss_pred HHHHHHHHHHccc----------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH------hHhHHHHHHH
Confidence 9999888762000 01678899999999998 66889999999999987 4577888888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYI 205 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l 205 (589)
....|+|..+++++.+.+
T Consensus 169 ~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 169 GGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHhhHHHHHHHHHHHH
Confidence 666777777666665543
No 71
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=1.1e-18 Score=183.24 Aligned_cols=154 Identities=14% Similarity=0.150 Sum_probs=133.3
Q ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 48 LIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
..+.++.+. +++|+++.+.+++.+++.++..++.++.|+++||+ |||+.+..+.++..++...+.++.
T Consensus 10 ~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~---------- 77 (377)
T PRK11102 10 YLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ---------- 77 (377)
T ss_pred HhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc----------
Confidence 345556555 57999999999999999999999999999999995 999999999999999999988866
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+.+.+++.|+++|++.+...+...+++.|.+|+ ++|++.+++.+....+|..++|.+++.+.+
T Consensus 78 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 140 (377)
T PRK11102 78 -----------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPK------EEFSRMMSFVTLVMTIAPLLAPIIGGWLLV 140 (377)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667889999999999999999999999999876 457888999999999999999999999999
Q ss_pred hcchhHhHHHHHHHHHHHHHHHH
Q 045410 208 NVSWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~ 230 (589)
..+|++.|++.+...++..+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 141 WFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HcChHHHHHHHHHHHHHHHHHHH
Confidence 89999999887666555544433
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=6.4e-19 Score=187.76 Aligned_cols=396 Identities=12% Similarity=0.085 Sum_probs=225.4
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccc-hHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGR-FRTLLYGSIASFLG 109 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~l~~~~~~~~~~ 109 (589)
...+.+..|+..+++-...++++.|+.+++|++..+.|++.+++.++..+++++.|+++||+ || |+++.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~ 82 (418)
T TIGR00889 4 TAKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALL 82 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHH
Confidence 34455677777777667779999999999999999999999999999999999999999994 65 77888888877777
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCC--CCCcchhhhhHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTT--TPKGKSQLESFFNWW 187 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~ 187 (589)
..+..+.. +++.+++.|++.+++.+...+...++..+...+. +..+...|.+.++
T Consensus 83 ~~~~~~~~---------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G-- 139 (418)
T TIGR00889 83 LFFAAQVT---------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG-- 139 (418)
T ss_pred HHHHHHhc---------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh--
Confidence 77777655 5677888888888887776666655533222100 0000011223332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCC
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQA 267 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (589)
.+|..++|.+++.+.....|. +|++.+++.++..+..+ ..++.++.+ ++++ .+..+.
T Consensus 140 ----~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~-~~~~-~~~~~~--------------- 196 (418)
T TIGR00889 140 ----TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAK-STAK-MSIKVM--------------- 196 (418)
T ss_pred ----hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCc-cccc-cCHHHH---------------
Confidence 468888888888774332344 45555554444433322 222211000 0000 000000
Q ss_pred CCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHH
Q 045410 268 SGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFC 347 (589)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 347 (589)
.. .+...+. ++.+.....+..++.....
T Consensus 197 -------------------------~~---~~~~~~~------------------------k~~~~~~~~~~~~~~~~~~ 224 (418)
T TIGR00889 197 -------------------------LG---LDAFILF------------------------KNKRMAIFFFFSMLLGAPL 224 (418)
T ss_pred -------------------------hh---hhHHHHh------------------------cCCCeeeHHHHHHHHHhHH
Confidence 00 0000000 0000000011111111111
Q ss_pred HHhhhcchhhHHhhhhhcccccC-ccc-ccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHH
Q 045410 348 FLAMDQQNTIGILQAIQTNKRFG-SFN-VPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMA 425 (589)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~ 425 (589)
...+ .+...+... .+.+.... ++. ...+....+..+..++...+. .++.+|+++| +.+.++.++.
T Consensus 225 ~~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~----g~l~dr~g~r-------~~l~~~~~~~ 291 (418)
T TIGR00889 225 QITN-IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTI----PFFLKRFGIK-------KVMLLSLVAW 291 (418)
T ss_pred HHHH-HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHH----HHHHHHhCcH-------HHHHHHHHHH
Confidence 1111 111111111 11111000 000 011222233333334444443 3446776544 4677788777
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHH-HHHHHHH
Q 045410 426 ILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFF-LSLSISS 504 (589)
Q Consensus 426 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~ 504 (589)
.+++.++..... .....+.++....+.+++.+...+....++.+.+|++.|++++|+.+ +...+|.
T Consensus 292 ~v~~~l~~~~~~-------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~ 358 (418)
T TIGR00889 292 ALRFGFFAYGDP-------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGS 358 (418)
T ss_pred HHHHHHHHHcCc-------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 777665554210 01122334556777888888888888899999999999999999997 5678999
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 045410 505 YINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRF 562 (589)
Q Consensus 505 ~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~ 562 (589)
.+|+.+.|.+.|..+.. +..+++..|.+.+++.++..++++++.++.
T Consensus 359 ~iGp~l~G~l~~~~g~~-----------~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 359 LLGYILSGVMVEKMFAY-----------GTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhccc-----------cCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999988643210 001356778888888888888888877654
No 73
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.87 E-value=2.2e-21 Score=203.49 Aligned_cols=366 Identities=33% Similarity=0.545 Sum_probs=233.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCC
Q 045410 96 FRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPK 175 (589)
Q Consensus 96 r~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 175 (589)
.|+++++.+++.+|++++.++. .|...+ ++.+...++++.++.++|.|+++|++.++++|+|++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~-~~~~~~-----------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~-- 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSA-IPPSLP-----------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD-- 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-TSSSC-----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT--
T ss_pred CHhhhHHHHHHHHHHHHhHHHH-hcchhh-----------hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc--
Confidence 4789999999999999988876 333111 12355779999999999999999999999999999763
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhcccccc-CCCCChHHH-HHHHH
Q 045410 176 GKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIK-NPQGSVFVD-MAKVI 253 (589)
Q Consensus 176 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~ 253 (589)
+++|.++|+++|+++|+|+.+++.+.+++.+++||.+.|.++.+..+++++.++..+++++.. +|.+.+..+ ...+.
T Consensus 67 -~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~ 145 (372)
T PF00854_consen 67 -DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVL 145 (372)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHH
T ss_pred -hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHH
Confidence 356778999999999999999999999999999999999999999999999988888887766 566665555 23333
Q ss_pred HHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcc-cchhhhHHHHH
Q 045410 254 TASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWR-LCSLLQVEQLK 332 (589)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 332 (589)
....++.....+... .+.... ................. .......+ ...|. .+..+.+++.+
T Consensus 146 ~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~k 208 (372)
T PF00854_consen 146 VAAFKKRKLAVPKGS-SWLDWA-------LFQYSERSIFGIIVFIR-AAVIFFPE--------IFFWALFCQVQRVEELK 208 (372)
T ss_dssp HHHHHHHCCCH-HHH-HHHHHH-------HHHHCCCCCCCCCCHHH-HHHHHCCC--------HHHHTTTSSTTTHHHCC
T ss_pred HHHHHHhhcccccch-HHHHHh-------hhhhhhhhhhhhhhhcc-chhhhhhh--------hhhcccCCccceeeeee
Confidence 333333332221110 000000 00000000000000000 11111100 00110 02234555666
Q ss_pred HHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhcccccCc-ccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCC
Q 045410 333 LLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKRFGS-FNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIR 411 (589)
Q Consensus 333 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~ 411 (589)
.+.+.++.+.+.++++..+.+.+.....+...++....+ ++.+++++..+|.+..+++.|+++++++|+.+ +++.
T Consensus 209 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~----~~~~ 284 (372)
T PF00854_consen 209 ALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLR----RGIQ 284 (372)
T ss_dssp HHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTT----T---
T ss_pred eeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhh----hccc
Confidence 777777777777788887777777777777777777777 88999999999999999999999999888877 2233
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHH
Q 045410 412 LTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTV 491 (589)
Q Consensus 412 ~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~ 491 (589)
.+.+.++.+|++++.+++++....+..|.......+ ..+.+|.++.+++..+++.+..+...+...|.+|++..+.
T Consensus 285 ~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~ 360 (372)
T PF00854_consen 285 PSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG----KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSS 360 (372)
T ss_dssp ---HHHHHHH-HHHHHHHHTTTHHHH---HH----T----T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSS
T ss_pred chhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC----CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHH
Confidence 688999999999999999998887765554444333 4445677799999999999999999998888888888888
Q ss_pred HHHHHHHHHH
Q 045410 492 SGAVFFLSLS 501 (589)
Q Consensus 492 ~~g~~~~~~~ 501 (589)
.+|++.....
T Consensus 361 m~~~~~~~~~ 370 (372)
T PF00854_consen 361 MMGIWFALSA 370 (372)
T ss_dssp STHHHHHHH-
T ss_pred HHHHHHHHhc
Confidence 8887766543
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=4.9e-19 Score=187.51 Aligned_cols=389 Identities=12% Similarity=0.028 Sum_probs=225.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
|..|......++...++..+.++++.|+++++|.+..+.+++.+++.+...+++++.|+++|| +|||+.++.+.+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 445667677888888888888999999999999999999999999999999999999999999 5999999988776655
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
+..........+.+ .......+++++++.|++.+...+....+..|.-++ +...++...
T Consensus 81 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~ 139 (396)
T TIGR00882 81 LFAPFFIYVFGPLL-------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYGKAR 139 (396)
T ss_pred HHHHHHHHHhhhHH-------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccchhh
Confidence 44332211100100 000223456678888888888888888777664221 112455666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCC
Q 045410 189 FSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQAS 268 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (589)
...++|..++|.+++.+.+ .+|+..|++.+.+.++..++.+...++ +|+++... ++.+ . +++
T Consensus 140 ~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------~~~~--~-~~~ 201 (396)
T TIGR00882 140 MFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPK----APSSATVA----------NALG--A-NAS 201 (396)
T ss_pred hhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCC----Cchhhhhh----------cccc--c-ccC
Confidence 6778999999999988865 699999988776665554443332221 11100000 0000 0 000
Q ss_pred CCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHH
Q 045410 269 GNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCF 348 (589)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 348 (589)
+ .+. .+..++ .++ |..+..+...+.....+
T Consensus 202 --------~--------------~~~---~~~~~~------------------------l~~-~~~~~~~l~~~~~~~~~ 231 (396)
T TIGR00882 202 --------A--------------FSL---KLALEL------------------------FRQ-RKFWMFVLYVVGVACVY 231 (396)
T ss_pred --------C--------------CCH---HHHHHH------------------------HcC-CcHHHHHHHHHHHHHHH
Confidence 0 000 000000 000 11111111111111111
Q ss_pred HhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 045410 349 LAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILS 428 (589)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~ 428 (589)
....+..+.+... .......+ ....+....+..+...+..... .++.+|.++| +.+.++.++.+++
T Consensus 232 ~~~~~~~~~y~~~--~~~~~~~~-~~~~g~~~~~~~i~~~~~~~~~----g~l~~r~g~~-------~~l~~~~~l~~l~ 297 (396)
T TIGR00882 232 DVFDQQFANFFTS--FFATPQQG-TRVFGYVTTMGELLNALIMFCA----PLIINRIGAK-------NALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHH--hccccccc-hHHHHHHHHHHHHHHHHHHHHH----HHHHHHhccc-------hhHHHHHHHHHHH
Confidence 1111111211111 11110100 0011222233333333334443 3346776554 2566777777776
Q ss_pred HHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHH-HHHHHHHHHHHH
Q 045410 429 LLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAV-FFLSLSISSYIN 507 (589)
Q Consensus 429 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~l~ 507 (589)
..+..... +.+++.+...+.+++..........+..+..|++.++++.+. ++....+|+.++
T Consensus 298 ~~~~~~~~-----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~ 360 (396)
T TIGR00882 298 IIGSSFAT-----------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFL 360 (396)
T ss_pred HHHHHhcC-----------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHH
Confidence 65544321 344455566777777666555666778888899999988776 678889999999
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 045410 508 SALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYF 555 (589)
Q Consensus 508 ~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~ 555 (589)
+.+.|.+.|.. ++...|.+.+++.++..+.-
T Consensus 361 ~~l~G~l~~~~-----------------G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 361 STLAGNMYDSI-----------------GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHhHHHHHHhc-----------------ccHHHHHHHHHHHHHHHHHH
Confidence 99999988632 24567777777766665543
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.86 E-value=5.5e-18 Score=184.20 Aligned_cols=175 Identities=15% Similarity=0.111 Sum_probs=136.7
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcc-----cchHH-HH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYL-----GRFRT-LL 100 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-----Grr~~-l~ 100 (589)
+||+.+.++++.+...+..+.....++.++. +.|.+..+.+.... .... +++.++.|+++|| + ||||. ++
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~~ll 85 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSL-VGQA-YVFKFLWSPLMDR-YTPPFLGRRRGWLL 85 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHc-ccccCCCCchHHHH
Confidence 4556677777888888887777777888876 56999999998733 2223 3689999999999 7 99986 55
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhh
Q 045410 101 YGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQL 180 (589)
Q Consensus 101 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 180 (589)
.+.+..+++...+++.. | ..+.+.+.+.+++.+++.+...+...++..|++|+ ++|
T Consensus 86 ~~~i~~~~~~~~~a~~~--~----------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~------~~r 141 (491)
T PRK11010 86 ATQLLLLVAIAAMGFLE--P----------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA------EER 141 (491)
T ss_pred HHHHHHHHHHHHHHHcC--C----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh------hhh
Confidence 67777777777777753 1 12567788889999999999999999999999986 447
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHhHHHHHHHHHHHHHHH
Q 045410 181 ESFFNWWYFSFTVALVVALTAVVYIQT-NVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
++..++...+.++|..+++.+++++.+ ..|||..|++.+++.++..+..
T Consensus 142 g~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 142 GAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 788888888999999999999999988 5799999998776655554433
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=1.1e-18 Score=209.38 Aligned_cols=157 Identities=13% Similarity=0.067 Sum_probs=124.7
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDG--ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+.+.....+...++..+...+....+..++.+.++.+. ...+++.+++.+...++++++|+++||+ |||++++++.+
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~ 85 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKL 85 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHH
Confidence 34455555566666666666666666667766666654 4478999999999999999999999995 99999999987
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+.+++.+++.++... .+.+.++++|+++|++.+...++..+++.|++|+ ++|++++
T Consensus 86 ~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~------~~r~~~~ 141 (1146)
T PRK08633 86 FEVGLTLLIVLAYYL------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK------ENLSRAN 141 (1146)
T ss_pred HHHHHHHHHHHHHHH------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc------ccchhhh
Confidence 766666555443210 1578899999999999999999999999999987 3477889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTN 208 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~ 208 (589)
++...+.++|.++|+.+++++.+.
T Consensus 142 ~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 142 GLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875
No 77
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.1e-19 Score=191.24 Aligned_cols=377 Identities=15% Similarity=0.155 Sum_probs=240.8
Q ss_pred hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCch
Q 045410 59 KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGW 138 (589)
Q Consensus 59 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 138 (589)
+++++..|.+++.+.+..++.++++++|+++||+ |-|+++..+.++.++++++..++.. .
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------~ 126 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------I 126 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-------------------h
Confidence 5889999999999999999999999999999995 9999999999999999999988762 2
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHhHHH
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN-VSWILGFAI 217 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~g~~~~f~~ 217 (589)
+.+.+++.|+++|++.|...|+...+.+.+.|+ ++|++..++.+.+..+|.+++..++|++.+. +||+++|++
T Consensus 127 ~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~------~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~ 200 (466)
T KOG2532|consen 127 GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPP------NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYV 200 (466)
T ss_pred cchhhHHHHHHhHHHHhHHHhhhhceeeeECCH------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHH
Confidence 445789999999999999999999999999998 5688999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhh
Q 045410 218 PTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRC 297 (589)
Q Consensus 218 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (589)
.+.+.++..++++......+.++|.-+..+ . ....+++....
T Consensus 201 ~g~~g~i~~~~w~~~~~d~P~~h~~is~~E-l----~~I~~~k~~~~--------------------------------- 242 (466)
T KOG2532|consen 201 FGIVGLIWFILWFLFYSDSPSKHPNISEKE-L----KYIEKGKSEAH--------------------------------- 242 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCHHH-H----HHHHhcccccc---------------------------------
Confidence 998888777776665443232222211100 0 00001100000
Q ss_pred hhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhH-HHHHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccc
Q 045410 298 LDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAM-FPVWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPP 376 (589)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (589)
.+...+.||+...+ + ..++.. +..+.....+++..+ +.+.+.....+++.. ..
T Consensus 243 --------------~~~~~~vP~~~i~t----s-~~vwai~~~~f~~~~~~~~l~~-y~PtY~~~VL~f~v~------~~ 296 (466)
T KOG2532|consen 243 --------------VKKKPPVPYKAILT----S-PPVWAIWISAFGGNWGFYLLLT-YLPTYLKEVLGFDVR------ET 296 (466)
T ss_pred --------------cCCCCCCCHHHHHc----C-HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHhCCChh------hh
Confidence 00001345522111 0 111111 111222222222222 223333334444442 36
Q ss_pred cccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccch
Q 045410 377 GWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRI--TIGILMAILSLLVAGFVERKRRLSALQHGSFESPIS 454 (589)
Q Consensus 377 ~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i--~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 454 (589)
+++..+..+...+...+.+.+.|++.+| .-. .+..+++ .+++...++.++.+++.. ..+
T Consensus 297 G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~---------------~~~ 357 (466)
T KOG2532|consen 297 GFLSALPFLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTS---------------DEH 357 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecC---------------CCc
Confidence 6677777777777777777775555554 211 1222233 556666667777666653 111
Q ss_pred hHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCc
Q 045410 455 ILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNK 534 (589)
Q Consensus 455 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~ 534 (589)
.+..++.+.+.....++..+..+.-..+.+ ++..+..+|+.++...+...++|.+++.+.. . + +.
T Consensus 358 ~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~------------~-t~ 422 (466)
T KOG2532|consen 358 RLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVT-D------------N-TR 422 (466)
T ss_pred chHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C------------C-CH
Confidence 112222222211112222222222222224 5669999999999999999999999987763 1 0 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 535 DTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 535 ~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
..-.++|++.+++.++..+++.++.
T Consensus 423 ~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 423 EEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHHHHHhchheeEee
Confidence 2234578888888888887766663
No 78
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=3.6e-18 Score=184.88 Aligned_cols=354 Identities=14% Similarity=0.099 Sum_probs=223.0
Q ss_pred HHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHH
Q 045410 35 LGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMT 114 (589)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~ 114 (589)
....++..++......-++-++ .++.-|+...+.+.....+-..+..+++|.++||+ .|||+++.+-++..+....++
T Consensus 16 w~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 16 WIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHH
Confidence 3355555555443333334333 35667899999999999999999999999999995 999999999988877666555
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHH
Q 045410 115 LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVA 194 (589)
Q Consensus 115 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (589)
+..... ..+++.+++.-++.|++.+...|+.++++.|+.|++ +...+.++.....|+.
T Consensus 94 ~l~~~~----------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~------~L~~A~al~s~~~nia 151 (524)
T PF05977_consen 94 VLAFFG----------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE------DLPAANALNSISFNIA 151 (524)
T ss_pred HHHHhC----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh------hHHHHHHHHHHHHHHH
Confidence 432111 236788888899999999999999999999999873 4667888888899999
Q ss_pred HHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccC
Q 045410 195 LVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYD 274 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (589)
-++||.++|.+...+|-.+.|.+.++..++.+.++...++.. +++..+.+...+.+ +.
T Consensus 152 r~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~---~~~~~~~e~~~~~l----~~--------------- 209 (524)
T PF05977_consen 152 RIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP---PPSSLPRERFFSAL----RE--------------- 209 (524)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc---cccccchhhhhhhH----HH---------------
Confidence 999999999999988988899988776665544433322211 11110100000000 00
Q ss_pred CCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcc
Q 045410 275 PPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQ 354 (589)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 354 (589)
..... .. ....+.++.. .+++........ ..
T Consensus 210 -------------------------G~ryv-------------------~~--~~~l~~~l~~--~~~~~l~~~a~~-aL 240 (524)
T PF05977_consen 210 -------------------------GLRYV-------------------RS--SPPLRSVLLR--SFLFNLFASAVW-AL 240 (524)
T ss_pred -------------------------HHHHH-------------------hc--chHHHHHHHH--HHHHHHhhhHHH-Hh
Confidence 00000 00 0001111110 011111111111 11
Q ss_pred hhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 045410 355 NTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGF 434 (589)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~ 434 (589)
.+....+..+.+.. ..+.+.....++.+++..+..+ +.+|+ +..+.+..+.++.+++++.+++
T Consensus 241 lPl~a~~~l~~~a~------~yGll~a~~gvGai~Gal~~~~----l~~~~-------~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 241 LPLFARDVLGGGAS------GYGLLLAAFGVGAILGALLLPR----LRRRL-------SSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred hhHHHHHHhCCcHH------HHHHHHHHHHHHHHHHHHHHHH----hhccc-------CcchhhHHHHHHHHHHHHHHhc
Confidence 11111111111111 1122223334444444444222 23333 3334667778888887777776
Q ss_pred HHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 435 VERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNII 514 (589)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 514 (589)
.. +.+..++..++.|++........++.+.+.+|+++||++.+++++....+..+|..+.|.+
T Consensus 304 ~~-----------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 304 SP-----------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFL 366 (524)
T ss_pred ch-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 4555666778888888888888899999999999999999999999999999999999988
Q ss_pred hhc
Q 045410 515 HGL 517 (589)
Q Consensus 515 ~~~ 517 (589)
.+.
T Consensus 367 a~~ 369 (524)
T PF05977_consen 367 ADH 369 (524)
T ss_pred HHH
Confidence 763
No 79
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=1.9e-18 Score=185.21 Aligned_cols=355 Identities=14% Similarity=0.144 Sum_probs=213.4
Q ss_pred HHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchH-HHHHHHHHHHHHHHHHH
Q 045410 39 TFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFR-TLLYGSIASFLGMGIMT 114 (589)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~l~~~~~~~~~~~~~~~ 114 (589)
+.....+..+.++++.|+++.+|+++.+.|.+.++..+..++..|+.|+++||. +|||| .++.+.+.+.++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 334455555668899999999999999999999999999999999999999983 48855 56677777877777776
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHH
Q 045410 115 LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVA 194 (589)
Q Consensus 115 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (589)
..++.+. ......+++.+++.+++.+.......++..|..++. ++|++..++.....++|
T Consensus 89 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-----~~R~~~~~~~~~~~~~g 148 (437)
T TIGR00792 89 TTPDFSA---------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP-----RERESLSTFRRFGATLG 148 (437)
T ss_pred hCCCCCc---------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH-----HHHHHHHHHHHHHHHHH
Confidence 6442111 113456677778888888888888888888877542 45777888877788888
Q ss_pred HHHHHHHHHHHHh-------hcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCC
Q 045410 195 LVVALTAVVYIQT-------NVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQA 267 (589)
Q Consensus 195 ~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (589)
..+++.+.+.+.. ..+|++.+.+.+++.++..+..+...++.++..+++++
T Consensus 149 ~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~---------------------- 206 (437)
T TIGR00792 149 GLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE---------------------- 206 (437)
T ss_pred HHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc----------------------
Confidence 8777766555542 35799888877666555544333322221100000000
Q ss_pred CCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHH
Q 045410 268 SGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFC 347 (589)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 347 (589)
+ + . +..+. + +.....|.....+. ...+.
T Consensus 207 ~--------~---------------~--~~~~~-------------------~-----~~l~~~~~~~~~~~---~~~~~ 234 (437)
T TIGR00792 207 K--------K---------------L--SLKQI-------------------F-----KALFKNDQLLILCL---AYLFY 234 (437)
T ss_pred c--------C---------------C--CHHHH-------------------H-----HHHhCCHHHHHHHH---HHHHH
Confidence 0 0 0 00000 0 00000111111111 11111
Q ss_pred HHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHH
Q 045410 348 FLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAIL 427 (589)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i 427 (589)
+............... ...+ .....+.+..+..+..+++.++.+++ .+|+++| +.+.++.++.++
T Consensus 235 ~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l----~~r~g~~-------~~~~~~~~~~~~ 299 (437)
T TIGR00792 235 NLAFNIKNGVQVYYFT---YVLG-DPELFSYMGSIAIVAGLIGVLLFPRL----VKKFGRK-------ILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHcchhheeEe---eecC-ChHHHHHHHHHHHHHHHHHHHHHHHH----HHHhCcH-------HHHHHHHHHHHH
Confidence 1111111111111100 0000 00111223333445555555665444 6666543 356777777777
Q ss_pred HHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccC-------chhhHHHHHHHHHHH
Q 045410 428 SLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLP-------ESMRTVSGAVFFLSL 500 (589)
Q Consensus 428 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~ 500 (589)
++++..+.. .+.+..++..++.+++.+...+..+++..|..| ++.+|.+.|++++..
T Consensus 300 ~~~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 363 (437)
T TIGR00792 300 GYLIFFFAG----------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVR 363 (437)
T ss_pred HHHHHHHcc----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHH
Confidence 766655431 123344556677788888888888888887765 567899999999999
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 045410 501 SISSYINSALVNIIHGLT 518 (589)
Q Consensus 501 ~lg~~l~~~l~~~i~~~~ 518 (589)
.+|+.+++.+.+.+.+..
T Consensus 364 ~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 364 KLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999988765
No 80
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=7.7e-19 Score=177.69 Aligned_cols=391 Identities=13% Similarity=0.088 Sum_probs=247.9
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.+.|.++. -...+...+....+.+.+.+++.+++|+|+.|.+++.++..+...+..++-|.+.|| +|.|++..++.++
T Consensus 11 ~~~~~L~~-S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLWL-STLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSMLL 88 (417)
T ss_pred chhHHHHH-HHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHHHH
Confidence 34444443 334444455556667888888999999999999999999999999999999999999 5999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..+-.+..+++.+-| +.+.+++.+++.|++ |..+++..++++..||++ .++.+++
T Consensus 89 ~~IP~~~~~~a~~~~------------------~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~------~qG~AlG 143 (417)
T COG2223 89 LLIPCLGLAFAVTYP------------------STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKE------KQGLALG 143 (417)
T ss_pred HHHHHHHHHHHccCC------------------chHHHHHHHHHHhcc-cceehcccccccccCChh------hhhHHHH
Confidence 999999999987433 447899999999999 556788899999999984 4667899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc---hhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhcccc
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVS---WILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKV 262 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g---~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (589)
++. ..|+|..+...+++++....+ |+....+.....++..+.+++..+..++..+..++..
T Consensus 144 I~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~--------------- 207 (417)
T COG2223 144 IAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL--------------- 207 (417)
T ss_pred Hhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------
Confidence 988 889999999999999999888 8877776666665555554444332211111111100
Q ss_pred ccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHH
Q 045410 263 NLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWI 342 (589)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (589)
+ .+ ++ .+ ...++.| ...+.+...+.
T Consensus 208 --~-~~-----------------------------~~--~v----------~~~~~~W-----------~lsllY~~tFG 232 (417)
T COG2223 208 --P-AQ-----------------------------LK--AV----------FSNKDTW-----------LLSLLYFATFG 232 (417)
T ss_pred --h-hH-----------------------------HH--HH----------hcCcchH-----------HHHHHHHHHHH
Confidence 0 00 00 00 0001111 11222222221
Q ss_pred HHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHH
Q 045410 343 TGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGI 422 (589)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~ 422 (589)
.-+ .+..+.+.+. ..+...+. ..++......++...+..|+.+++ .||++.+ +...+.+
T Consensus 233 ~Fv----gfs~~l~~~~--~~~fg~~~----~~Ag~~a~~f~~~g~l~Rp~GG~L----sDR~Gg~-------rv~~~~f 291 (417)
T COG2223 233 GFV----GFSAYLPMYL--VTQFGLSP----VTAGLIAFLFPLIGALARPLGGWL----SDRIGGR-------RVTLAVF 291 (417)
T ss_pred HHH----HHHHHHHHHH--HHhcCCCh----hhHHHHHHHHHHHHHHHHhccchh----hhhccch-------hHHHHHH
Confidence 111 1111112111 11111111 334455555666666777777776 6665433 3566667
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHH
Q 045410 423 LMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSI 502 (589)
Q Consensus 423 ~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~l 502 (589)
..++++..+..+... ......+....+..++..++..+...-..+.++..++|+ +-|.+.|+.....++
T Consensus 292 ~~~~~~~~~l~~~~~----------~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~l 360 (417)
T COG2223 292 VGMALAAALLSLFLT----------GFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGL 360 (417)
T ss_pred HHHHHHHHHHHcccc----------ccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccc
Confidence 777776666655421 000012222223333333333333344445555666655 588888998888899
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 045410 503 SSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRF 562 (589)
Q Consensus 503 g~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~ 562 (589)
|++.-|...+...+.++ .+...|+++..+.+++.++++....+.
T Consensus 361 GGf~lp~~~g~~~~~tg----------------~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 361 GGFFLPLAFGVSLDLTG----------------SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred cccchhHHHHHHHHhcc----------------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99888888888876542 245678888888888888877776554
No 81
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=1.3e-18 Score=208.50 Aligned_cols=144 Identities=13% Similarity=0.109 Sum_probs=109.3
Q ss_pred HHHHhcCCch-hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH--HHHHHHHHHHH-hhcCCCCCCCCCCCC
Q 045410 55 YLRTKYNMDG-ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI--ASFLGMGIMTL-TASIPKLRPPDCTGA 130 (589)
Q Consensus 55 yl~~~lg~s~-~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~--~~~~~~~~~~~-~~s~~~~~~~~~~~~ 130 (589)
.+.++.+.+. ...++..+++.+.+.++.+++|+++||+ |||+++..... +...+.....+ ..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~~------------- 106 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHLN------------- 106 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 3444444433 4467788899999999999999999995 99998644222 22222222222 23
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045410 131 QCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
+.+.++++|+++|++.+...|+..+++.|++|+ ++|++++++.+++.++|.++||.++|++.+..+
T Consensus 107 --------s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~------~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~ 172 (1140)
T PRK06814 107 --------SVPLLFAALFLMGIHSALFGPIKYSILPDHLNK------DELLGANALVEAGTFIAILLGTIIGGLATISGN 172 (1140)
T ss_pred --------hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc------cccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 678899999999999999999999999999987 347778999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHH
Q 045410 211 WILGFAIPTGCFFLSI 226 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~ 226 (589)
|++.|.+..+..++.+
T Consensus 173 ~~~~~~~~~~~~~~~~ 188 (1140)
T PRK06814 173 FVILVALLMGIAVLGW 188 (1140)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 9988854444444333
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.85 E-value=1.2e-18 Score=183.33 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=113.7
Q ss_pred HHHHHHHHhcC--CchhHHHHHHHHH-----HHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 045410 51 NMTVYLRTKYN--MDGILLVNVVSIW-----GGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLR 123 (589)
Q Consensus 51 ~l~~yl~~~lg--~s~~~~~~~~~~~-----~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~ 123 (589)
+...++.++.. .++.+.+.+.+.. .+...++.++.|+++|| +||||+++.+.++..++.++++++.+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 45556655543 4556665554432 22334688999999999 599999999999999999999887632210
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 045410 124 PPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVV 203 (589)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 203 (589)
.......++++|+++|++.+...+...+++.|.+|+ ++|+...++.+.+..+|..+++.+..
T Consensus 92 ------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~------~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 92 ------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP------GKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc------ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 001234688999999999999999999999999986 34667888888888999999988776
Q ss_pred HHH--------hhcchhHhHHHHHHHHHHH
Q 045410 204 YIQ--------TNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 204 ~l~--------~~~g~~~~f~~~~~~~~i~ 225 (589)
.+. +.++||+.|.+..++.++.
T Consensus 154 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 183 (394)
T TIGR00883 154 LLSYLLGDDALLEWGWRIPFLVSAVLVLIG 183 (394)
T ss_pred HHHHhcCHHHhhccchHHHHHHHHHHHHHH
Confidence 654 3568999988766554443
No 83
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.84 E-value=7.5e-19 Score=183.63 Aligned_cols=159 Identities=13% Similarity=0.018 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGM 110 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~ 110 (589)
.+......++....++...+.++.++.+++|+|..+.+++.+++.++..++.++.|+++||+ |||+.++.+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 34455566666666676777777789999999999999999999999999999999999995 99999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH
Q 045410 111 GIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS 190 (589)
Q Consensus 111 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (589)
++++++. .+.+.++++|+++|++.+. .+...+++.|.+|+ ++|++..+++...
T Consensus 82 ~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~------~~r~~~~~~~~~~ 134 (366)
T TIGR00886 82 LWAGLAV--------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPK------KIQGTALGLAAGW 134 (366)
T ss_pred HHHHHHh--------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCH------hhhhHHHHHHHHH
Confidence 8888754 0457788999999999665 46678899999986 3477788888877
Q ss_pred HHHHHHHHHHHHHHHHh----------hcchhHhHHH
Q 045410 191 FTVALVVALTAVVYIQT----------NVSWILGFAI 217 (589)
Q Consensus 191 ~~~g~~~~~~~~~~l~~----------~~g~~~~f~~ 217 (589)
.++|..+++.+++.+.. ..+||+.|++
T Consensus 135 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 135 GNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 78888888777766654 2379999844
No 84
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.84 E-value=2.7e-18 Score=178.98 Aligned_cols=152 Identities=14% Similarity=0.134 Sum_probs=123.9
Q ss_pred HHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcC
Q 045410 40 FEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASI 119 (589)
Q Consensus 40 ~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~ 119 (589)
++.-.++.....+.+.+.+++|++.++.+++.+.+.++..++.++.|+++|| +||||++.++.++..++.+.+ ...
T Consensus 10 ~~~~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~~-- 85 (355)
T TIGR00896 10 LNLRPALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SAP-- 85 (355)
T ss_pred hcccCccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-Hhc--
Confidence 3333444444556667788999999999999999999999999999999999 599999999998888777666 433
Q ss_pred CCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHH
Q 045410 120 PKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVAL 199 (589)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 199 (589)
+.+.+++.|++.|++.+...+..+.++.|.+|+ +|++.+++++...++|..+++
T Consensus 86 -------------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~ 139 (355)
T TIGR00896 86 -------------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAA 139 (355)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHH
Confidence 567788999999999998888888888887752 366788898889999999999
Q ss_pred HHHHHHHhhcc--hhHhHHHHHHH
Q 045410 200 TAVVYIQTNVS--WILGFAIPTGC 221 (589)
Q Consensus 200 ~~~~~l~~~~g--~~~~f~~~~~~ 221 (589)
.+++.+.+..+ ||+.|.+.++.
T Consensus 140 ~~~~~l~~~~~~~w~~~f~~~~~~ 163 (355)
T TIGR00896 140 AATVPLAQHSGGHWQQALAWWALP 163 (355)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99888877653 88888765543
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.84 E-value=1.7e-17 Score=176.30 Aligned_cols=166 Identities=14% Similarity=0.078 Sum_probs=133.5
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
+..|+.....+++...+.+.+++++|+++.+.+++.+.+.+++.++.++.|++.|| +|||++++.+.++++++.+++..
T Consensus 9 ~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~~~ 87 (410)
T TIGR00885 9 TSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLFWP 87 (410)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHH
Confidence 33344333445677677778899999999999999999999999999999999999 59999999999999999888755
Q ss_pred hhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHH
Q 045410 116 TASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVAL 195 (589)
Q Consensus 116 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (589)
+... .+++.++++|++.|+|.|...+..++++.+..|++ .|++..++.+...++|.
T Consensus 88 ~~~~------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~ 143 (410)
T TIGR00885 88 AAEI------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPES------TATRRLNLAQSFNPFGS 143 (410)
T ss_pred HHhh------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh------HHHHHHHHHHHHHHHHH
Confidence 4311 15778999999999999999999999999988753 35566888888889999
Q ss_pred HHHHHHHHHHHh--------------------------hcchhHhHHHHHHHHHHHH
Q 045410 196 VVALTAVVYIQT--------------------------NVSWILGFAIPTGCFFLSI 226 (589)
Q Consensus 196 ~~~~~~~~~l~~--------------------------~~g~~~~f~~~~~~~~i~~ 226 (589)
.++|.+++.+.. ..+||++|.+.+++.++..
T Consensus 144 ~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 144 IIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887742 2469999987666544443
No 86
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.84 E-value=2.6e-17 Score=173.51 Aligned_cols=154 Identities=10% Similarity=-0.052 Sum_probs=113.9
Q ss_pred HHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccch----HHHHHHHHHHHHHHHHH
Q 045410 38 ETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRF----RTLLYGSIASFLGMGIM 113 (589)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr----~~l~~~~~~~~~~~~~~ 113 (589)
.+...++...+.++++.|++ ++|.|..+.|++.+++.+...++.++.|.++||+ ||| +.+.++.++. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHHH
Confidence 44444555666678888885 6899999999999999999999999999999995 984 3332222111 11111
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH
Q 045410 114 TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV 193 (589)
Q Consensus 114 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 193 (589)
...+ +.+.+++.|++.|++.+...|...++..+. .+ +|++.++......++
T Consensus 89 ~~~~---------------------~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~-------~~~~a~~~~~~~~~l 139 (382)
T PRK11128 89 FGAH---------------------SFWLLFVAIGLFNLFFSPLVPLTDALANTW-QK-------QIGLDYGKVRLWGSI 139 (382)
T ss_pred Hhcc---------------------cHHHHHHHHHHHHHHHcccccHHHHHHHHH-Hh-------hccCCcchHHHHHHH
Confidence 1212 678888999999999999999888887775 22 233446666667789
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHHHHHHH
Q 045410 194 ALVVALTAVVYIQTNVSWILGFAIPTGCFFL 224 (589)
Q Consensus 194 g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i 224 (589)
|..+||.+++++.+++|||..|++.++..++
T Consensus 140 g~~igp~lgg~l~~~~g~~~~f~~~~~~~~~ 170 (382)
T PRK11128 140 AFVIGSALTGKLVSWFGEQAILWILTAGVAS 170 (382)
T ss_pred HHHHHHHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 9999999999999999999999876654433
No 87
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.82 E-value=1.2e-16 Score=170.27 Aligned_cols=439 Identities=12% Similarity=0.027 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhh---cccchHHHHHH-HHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDT---YLGRFRTLLYG-SIASF 107 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr---~~Grr~~l~~~-~~~~~ 107 (589)
+.+..+.+...+++-...+++++|+ +++|.+..+.+.+..+..+...+.+|+.|+++|| .+||||.++.+ .+...
T Consensus 7 i~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 7 LRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 3344455555666555566677765 6899999999999999999999999999999994 25999999886 55565
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
++.++++++.+...+..+.-. + .......+..+++..+.-++.....+...++++|++|+++ +++..+.++.
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~-~---~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~----~~~~~a~~~~ 157 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLD-K---KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA----RRTRIANAYF 157 (477)
T ss_pred HHHHHHHhCchhhhhcccccc-c---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh----HHHHHHHHHH
Confidence 666667665532211000000 0 0000111334444455566777778888999999999753 1234678888
Q ss_pred HHHHHHHHHHHHHHHHHHH--hhc-------------chhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYIQ--TNV-------------SWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKV 252 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~--~~~-------------g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (589)
....++|+++|+.++++.. +.+ +.+..|++.+++.++..+...+..++.+..++++..
T Consensus 158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~------- 230 (477)
T TIGR01301 158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI------- 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch-------
Confidence 8899999999999887752 211 567888888877776666555544432211110000
Q ss_pred HHHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHH
Q 045410 253 ITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLK 332 (589)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (589)
+++ ++...+ + +. ...++.+.+..+.--|
T Consensus 231 -------------~~~----~~~~~~------------~-~~----------------------~~~~~~i~~~~~~mP~ 258 (477)
T TIGR01301 231 -------------NSE----AAPPSK------------H-GE----------------------EAFFGELFGAFKYLPR 258 (477)
T ss_pred -------------hhh----cccccc------------c-ch----------------------hhhHHHHHHHHHHCCH
Confidence 000 000000 0 00 0000000000001113
Q ss_pred HHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhcccccCc--cccc---ccccchhhHHHHHHHHHhhhhHHHHhhhhhcC
Q 045410 333 LLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKRFGS--FNVP---PGWMGLISMLTLSTWIFFYERVFVPLSQKMTG 407 (589)
Q Consensus 333 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~ 407 (589)
.+.+.+...++..+-|..+..+.+.+..+...-..+-.. ++.- ..+...++.+... +.+.++.++.+|.++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGWGA 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcc
Confidence 344455556666666666666666554432211111000 0000 1112222233222 333344555777764
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhc-cCCCCccch-hHHHHHHHHHHHHHHHhHhhhHHHHHhhc
Q 045410 408 KKIRLTMRQRITIGILMAILSLLVAGFVERKRRL--SALQ-HGSFESPIS-ILVLVPQFSFSGLTEGFAAVAVMEFLTTQ 483 (589)
Q Consensus 408 k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~--~~~~-~~~~~~~~~-~~~~i~~~~l~g~g~~~~~~~~~~~~~~~ 483 (589)
|+ ..-.++.++.+++++...+......+ .... +.....+.. .+..+..+.+.|+.........++++.+.
T Consensus 335 ~k------~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 335 GK------RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred ch------hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 32 24477888888888877765410000 0000 000000111 35566677888888888888889999999
Q ss_pred cCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 045410 484 LPE--SMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACR 561 (589)
Q Consensus 484 ~P~--~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 561 (589)
.|+ +..|..+|+.|.+-.+.+.+.....|.+.+..++ +..+++.+.++.++++.++.++..|+
T Consensus 409 ~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~---------------~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 409 SSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG---------------GNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC---------------CCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 995 4559999999999999999999888876543321 11346677777777887877777666
Q ss_pred cc
Q 045410 562 FV 563 (589)
Q Consensus 562 ~~ 563 (589)
.+
T Consensus 474 ~~ 475 (477)
T TIGR01301 474 PR 475 (477)
T ss_pred CC
Confidence 54
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.82 E-value=1.7e-16 Score=168.39 Aligned_cols=164 Identities=13% Similarity=0.073 Sum_probs=127.8
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcc-----cchH-HHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYL-----GRFR-TLLYGSIASFLG 109 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-----Grr~-~l~~~~~~~~~~ 109 (589)
.+.+.....+.-...-+|.|++ +.|++.++.|++..+... .+..++.|+++|| + |||| .++++.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHH
Confidence 3555556665556677888887 459999999999776665 6999999999999 6 7876 688888888877
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
...+++... ..+.+.+++..++.++..+...+...+++.|.+|+ ++|++..++...
T Consensus 82 ~~~l~~~~~------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~------~~r~~~~~~~~~ 137 (402)
T PRK11902 82 IAAMAFCPP------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP------EERGAGAAVKVL 137 (402)
T ss_pred HHHHHhcCc------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh------hhhhHHHHHHHH
Confidence 777777531 11466677777778888888999999999999876 347778888888
Q ss_pred HHHHHHHHHHHHHHHHHhh-cchhHhHHHHHHHHHHHHH
Q 045410 190 SFTVALVVALTAVVYIQTN-VSWILGFAIPTGCFFLSIV 227 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~i~~~ 227 (589)
+.++|..+++.+++++.+. .|||..|++.++..++..+
T Consensus 138 g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 138 GYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 8899999999998888885 5999999987766554433
No 89
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.81 E-value=2.9e-17 Score=171.24 Aligned_cols=159 Identities=16% Similarity=0.125 Sum_probs=119.8
Q ss_pred hhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc----ccchHHH-HHHHHHHHHHHHHHHHhhcCC
Q 045410 46 MSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY----LGRFRTL-LYGSIASFLGMGIMTLTASIP 120 (589)
Q Consensus 46 ~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~l-~~~~~~~~~~~~~~~~~~s~~ 120 (589)
+++.....+.+.+++|+|.++.++.... .+...+ .++.|+++||+ +||||.+ +.+.++.++....+++..+
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-- 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-- 79 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 3445555556667889999999999655 334444 89999999994 3899975 5666667666666666431
Q ss_pred CCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHH
Q 045410 121 KLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALT 200 (589)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 200 (589)
..+.+.+....++.+++.+...+...+++.|.+|+ ++|+.+.++...+.++|.++++.
T Consensus 80 ----------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~------~~r~~~~~~~~~~~~~G~~~~~~ 137 (356)
T TIGR00901 80 ----------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSD------EELGYGSTIYIVGYRAGMLLSGS 137 (356)
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------hhhchHHHHHHHHHHHHHHHHHH
Confidence 12455566666778888888899999999999976 45777888888899999999999
Q ss_pred HHHHHHhhcc--------hhHhHHHHHHHHHHHHHHHH
Q 045410 201 AVVYIQTNVS--------WILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 201 ~~~~l~~~~g--------~~~~f~~~~~~~~i~~~~~~ 230 (589)
+++.+....+ ||..|++.++..++..+..+
T Consensus 138 l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 138 LALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999988888 99999987776655544433
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.79 E-value=1.5e-16 Score=165.37 Aligned_cols=175 Identities=12% Similarity=0.043 Sum_probs=142.1
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhH-HHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGIL-LVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+.|+...+++|.- ..-.-+=...++..+|+.+++|+++.| .|.+.+++..++.++.+++|+++|| +|.|+++.++.+
T Consensus 23 ~~W~~~~~~lC~f-GF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l 100 (511)
T TIGR00806 23 KSWRVLVLYLCFY-GFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQAL 100 (511)
T ss_pred cchhHHHHHHHHH-HHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHH
Confidence 4677655433321 111112344567788999999999999 9999999999999999999999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
.+++..++++++. +...+.+.|++.|++.|... +...++..++|+ ++|+++.
T Consensus 101 ~Wsl~t~L~~fa~---------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~------kER~rat 152 (511)
T TIGR00806 101 SFVCVWLLLLLGT---------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP------SRYQRAA 152 (511)
T ss_pred HHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH------HHHHHHH
Confidence 9999999999987 67789999999999999999 999999999997 6788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHH---HHHHHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAI---PTGCFFLSIVVFLI 231 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~---~~~~~~i~~~~~~~ 231 (589)
+++..+.++|.+++++++++ ...+||++-+.+ ......++++..++
T Consensus 153 si~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 153 AYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 456899865443 33444444444333
No 91
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.79 E-value=4e-16 Score=169.15 Aligned_cols=149 Identities=9% Similarity=-0.024 Sum_probs=106.0
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhh----hcccch-HHHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSD----TYLGRF-RTLLYGSIASFLGM 110 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr-~~l~~~~~~~~~~~ 110 (589)
+..+...+.+..+.++++.|+++.+|++..+.|.+..+..+..++..|+.|+++| | +||| +.++++.+.+.++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHH
Confidence 3455556666677788999999999999999999999999999999999999999 6 4995 55555666666665
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH
Q 045410 111 GIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS 190 (589)
Q Consensus 111 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (589)
.++... |...+ ......+++..++.+++..+......++..|+.++. ++|.+..++-...
T Consensus 92 ~llf~~---p~~~~------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~-----~eR~~l~~~~~~~ 151 (473)
T PRK10429 92 FLLFSA---HLFEG------------TAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDK-----REREQLVPYPRFF 151 (473)
T ss_pred HHHHcC---CCCCc------------cHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCH-----HHHHHHHHHHHHH
Confidence 555432 21100 112334455556677888888888889999987543 4577777775666
Q ss_pred HHHHHHHHHHHHHHH
Q 045410 191 FTVALVVALTAVVYI 205 (589)
Q Consensus 191 ~~~g~~~~~~~~~~l 205 (589)
.++|+.+.+.+...+
T Consensus 152 ~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 152 ASLAGFVTAGFTLPF 166 (473)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677766665554433
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.79 E-value=7.1e-16 Score=166.65 Aligned_cols=152 Identities=14% Similarity=0.145 Sum_probs=117.1
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTG 129 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 129 (589)
.....++.+++|-+ ....|+.+...+..+++.++.|.|+|. ||||..++.+.++..+|+++++.++
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 44557888899965 667788888999999999999999999 5999999999999999999999988
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045410 130 AQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNV 209 (589)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 209 (589)
+...++++..+.|+|.|... .....++|..|. +.|..+..+......+....++.++..+..+.
T Consensus 130 ---------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~------k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~ 193 (599)
T PF06609_consen 130 ---------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPN------KWRGLGLAIASIPFIITTWISPLIAQLFAAHS 193 (599)
T ss_pred ---------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhccc------chhhhHhHHHHHHHHhhhcccHHHHHHhccCC
Confidence 66779999999999977765 456668999875 23444444444444444445666666665567
Q ss_pred chhHhHHHHHHHHHHHHHHHHH
Q 045410 210 SWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 210 g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+|||.|++.++...++++..++
T Consensus 194 ~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 194 GWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred CcchHHHHHHHHHHHHHHHHHH
Confidence 8999999988876666554333
No 93
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=7.2e-16 Score=165.84 Aligned_cols=170 Identities=11% Similarity=0.083 Sum_probs=117.6
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchHH-HHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFRT-LLYGSIASFLGMG 111 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~-l~~~~~~~~~~~~ 111 (589)
+..+.....+..+..+++.|+++.+|++..+.|.+..+..+..++..|+.|+++||. +||||. ++.+.+...+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344555566666778899999999999999999999999999999999999999993 377555 5566676766665
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
++... |.... ......+++..++.+++..+......++.+|+.+++ ++|.+..++.....
T Consensus 96 l~f~~---p~~~~------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~-----~eR~~l~~~r~~~~ 155 (444)
T PRK09669 96 LTFYT---PDFGA------------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDP-----RERHSLQSWRFALS 155 (444)
T ss_pred HHHhC---CCCCc------------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH-----HHHHHHHHHHHHHH
Confidence 54443 22110 123455555556667666677777888999987543 45677777777777
Q ss_pred HHHHHHHHHHHHHHHh-------hcchhHhHHHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQT-------NVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~i~ 225 (589)
++|..+++.+...+.. ..+|+..+.+.+++..+.
T Consensus 156 ~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 156 FIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 8888777765544433 235666665555444333
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=5.3e-16 Score=167.10 Aligned_cols=150 Identities=7% Similarity=0.004 Sum_probs=98.9
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchHHH-HHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFRTL-LYGSIASFLGMG 111 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l-~~~~~~~~~~~~ 111 (589)
+..+.....+..+.++++.|+++.+|++..+.|.+.++..+...+..++.|+++||. +||||.. +.+.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 455666777666778889999999999999999999999999999999999999993 3777755 555554544444
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH--
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF-- 189 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-- 189 (589)
++.... . .+.. ....+..++..++.+++.+...+...++..++..+. ++|.+..++-.+
T Consensus 95 ~~~~~~-~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-----~~r~~~~~~r~~~~ 155 (448)
T PRK09848 95 LVFWVP-T-DWSH------------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQP-----QSRARLGAARGIAA 155 (448)
T ss_pred HHHhCc-C-CCCc------------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCH-----HHHHHHHHHHHHHH
Confidence 332211 0 0000 112333444556778888888888888877776553 234455444332
Q ss_pred ---HHHHHHHHHHHHHHH
Q 045410 190 ---SFTVALVVALTAVVY 204 (589)
Q Consensus 190 ---~~~~g~~~~~~~~~~ 204 (589)
..+++..++|.+.+.
T Consensus 156 ~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 156 SLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 234555566655543
No 95
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=2.6e-15 Score=157.99 Aligned_cols=382 Identities=12% Similarity=0.107 Sum_probs=209.4
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIM 113 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~ 113 (589)
+....|+..+.+-...++++.|++ +.|+|..|+|.+.++..+...+++++.|+++||+..+||.+.+..++..+.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 444556666666667788999997 5789999999999999999999999999999996346777777666666655555
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH
Q 045410 114 TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV 193 (589)
Q Consensus 114 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 193 (589)
.... +.+.+++..++..+......|..-++..+...+ .+.+-+|-|.. +++
T Consensus 86 ~~~~---------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlw------GSi 136 (400)
T PF03825_consen 86 AFSS---------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLW------GSI 136 (400)
T ss_pred HHhc---------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhh------hhH
Confidence 4443 456666777777888777778877777776553 22222333443 344
Q ss_pred HHHHHHHH-HHHHHhhcc---hhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCC
Q 045410 194 ALVVALTA-VVYIQTNVS---WILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASG 269 (589)
Q Consensus 194 g~~~~~~~-~~~l~~~~g---~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (589)
|-+++... ++.+....+ ....+++.+...++... +.+..|+.+ ++++.. ....+.
T Consensus 137 Gf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~-~~l~lp~~~---~~~~~~---------------~~~~~~-- 195 (400)
T PF03825_consen 137 GFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAG-FALFLPKTP---PKRSAK---------------ESVKKL-- 195 (400)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHH-HHHhCCCCc---cccccC---------------CCcccc--
Confidence 44444322 222222222 22344544433222221 122223211 110000 000000
Q ss_pred CCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHH-HHHHHHHHHH
Q 045410 270 NSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMF-PVWITGIFCF 348 (589)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 348 (589)
...+ .++.+ ++ ++.+..+ ..++.....
T Consensus 196 --------------------------~~~~-------------------~~~ll-----k~-~~~~~Fll~~~l~~~~~- 223 (400)
T PF03825_consen 196 --------------------------LGLD-------------------ALKLL-----KN-PRFLVFLLAAFLIGISH- 223 (400)
T ss_pred --------------------------cchH-------------------HHHHh-----cC-ccHHHHHHHHHHHHHHH-
Confidence 0000 00000 00 1111111 111111111
Q ss_pred HhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 045410 349 LAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILS 428 (589)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~ 428 (589)
..+..+.+.+.....+.+... .+....+..+.=++...+ ..+..+|+ +..+.+.++++..++=
T Consensus 224 ~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~----~~~~~~r~-------g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 224 AAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFF----SGRFLKRF-------GIKWLLLLALVAYAVR 286 (400)
T ss_pred HHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHH----HHHHHHhc-------CHHHHHHHHHHHHHHH
Confidence 112222222222111111100 111111111111122122 23335554 5566888899888888
Q ss_pred HHHHHHHHHHHhhhhhccCCCCccchhHH----HHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHH-HHHH
Q 045410 429 LLVAGFVERKRRLSALQHGSFESPISILV----LVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLS-LSIS 503 (589)
Q Consensus 429 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~lg 503 (589)
..++.+.. .+.+. .....++.|+..++...+...++.+.+|++.|++++++++.. .++|
T Consensus 287 ~~l~a~~~----------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg 350 (400)
T PF03825_consen 287 WLLYAYFS----------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLG 350 (400)
T ss_pred HHHHHHhc----------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHH
Confidence 88887762 12222 222345789988899999999999999999999999998765 5899
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccc
Q 045410 504 SYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRF 562 (589)
Q Consensus 504 ~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~ 562 (589)
..+|+.++|.+.|..+..+.. .+..+|.+.+++.++..+++++..|+.
T Consensus 351 ~~iG~~igG~l~~~~g~~~~~-----------~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 351 GAIGSLIGGWLYDAFGARGMF-----------DWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHhcchhhh-----------hHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999998753221100 123456677777777777777775553
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.76 E-value=6.5e-15 Score=155.65 Aligned_cols=176 Identities=13% Similarity=-0.018 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHH--HHHHHHHHHhhhhhh-hHHhhhcccchHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNV--VSIWGGSSSLTAIPG-ALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Grr~~l~~~~~~~~ 107 (589)
...+....+...+.+..+.+.++.|++ +.|.|.++.|.+ .+.......+..|+. ++.+|| .||||..++...+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHH
Confidence 344555677777776666677888886 669999999997 466677777777777 668999 599999866654332
Q ss_pred H-HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 108 L-GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 108 ~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
. ......... +. ......++....+.++..+...+..-++..|..++ ++++...+.
T Consensus 81 ~~~~~~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~------~~~~~~~~~ 137 (390)
T TIGR02718 81 SACLASLALVG--PD---------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNG------RTLAKGNAV 137 (390)
T ss_pred HHHHHHHHcCC--cc---------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------hhhhHHHHH
Confidence 2 222222211 10 00122333334444555555555555555554332 345556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
..++..+|..+|+...+++.+.+|||..|++.+++.++..+..++
T Consensus 138 ~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 138 QIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 667778899999988889999999999999887766655444433
No 97
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.76 E-value=6.3e-16 Score=166.68 Aligned_cols=433 Identities=13% Similarity=0.085 Sum_probs=255.8
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHH---HHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIA---NMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY 101 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~ 101 (589)
.+.|- |.+.+..|+..+..|++.. .+-..+.++++.+.++++|+.++......+..|+.+.+.||+ |.|.+.+.
T Consensus 40 dGG~g--WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~ 116 (509)
T KOG2504|consen 40 DGGWG--WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIA 116 (509)
T ss_pred CCCee--eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHH
Confidence 34555 5566666666676676653 455667889999999999999999999999999999999995 99999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHH-HHHHHhhccccccHHHHhhccCCCCCCCcchhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGL-ALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQL 180 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 180 (589)
|.++..+|.++..++. +.|.+++.. ++.|+|.|+++.....+++.+|+ ++|
T Consensus 117 G~~v~~~g~~lssF~~---------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-------kkR 168 (509)
T KOG2504|consen 117 GGLVAALGLLLSSFAT---------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-------KKR 168 (509)
T ss_pred HHHHHHHHHHHHHHHh---------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-------HHH
Confidence 9999999999999988 555555554 67899999999999999998886 356
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhcc
Q 045410 181 ESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKR 260 (589)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (589)
+.+.++...+..+|.++-|.+..++.+.+|||..+++-+.+.+-.++.....+|.....++. ...+. ++.
T Consensus 169 ~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~--------~~~ 238 (509)
T KOG2504|consen 169 ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDL--------RNS 238 (509)
T ss_pred HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhh--------ccc
Confidence 67777766677788888888888999999999998886666554555444444432222222 00000 000
Q ss_pred ccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHH
Q 045410 261 KVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPV 340 (589)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 340 (589)
........ .+..+ ... .+...+.+ .............++.+..+...... .+..+...+..-+...+..
T Consensus 239 ~~~~~~~~----~~~~~----~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~ll~~~~fl~~~~~~ 307 (509)
T KOG2504|consen 239 AASVESTP----KPVEL----RIS-ERDSGLKK-LSLSNLATLKRGPDKWRNSPLQAFLS-MLDLSLLKDPKFLLLALSN 307 (509)
T ss_pred cccccccc----ccccc----ccc-cCCCCCCc-ccccchhhhhhCCccccccchhhhhh-hhhHHHHcCchHHHHHHHH
Confidence 00000000 00000 000 00000000 00000000000000000000000000 0001111111111111111
Q ss_pred HHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHH
Q 045410 341 WITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITI 420 (589)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~ 420 (589)
.+....+...+ ........ +... -+...+....+..+.-+++.++.+.+ .++.. .+......+
T Consensus 308 ~~~~~g~~~p~----~~l~~~~~--~~g~--~~~~aa~l~Siigi~~i~gRi~~G~l----aD~~~-----~~~~~~~~~ 370 (509)
T KOG2504|consen 308 LFAYLGFNVPF----VYLPSYAK--SLGL--SSNDAAFLLSIIGVSDIIGRIILGLL----ADKPG-----IRALVLFLL 370 (509)
T ss_pred HHHHHHHHHHH----HHHHHHHh--hcCC--ChhhhHHHHHHHHHhhhhhhhhhhhh----cCccc-----cchHHHHHH
Confidence 11111111110 11111111 1111 01223333444455555666665555 44432 233455666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHH
Q 045410 421 GILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSL 500 (589)
Q Consensus 421 g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 500 (589)
++++.+++.+.+.+.. +.+.++...++.|+..+...........+..+.+.-..+.|+..+.+
T Consensus 371 ~ll~~gl~~~~~p~~~-----------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 371 TLLIAGLARLFLPFAT-----------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred HHHHHHHHHHHHHHhc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 7777777765555542 45566777788888888877777788899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 501 SISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 501 ~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
+++..+|+.+.+.+.|.++ +|+..|++++++.+++.+.+++..
T Consensus 434 gi~~l~gpPiag~~~d~tg----------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITG----------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHcCcccceeeeeccC----------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999997776542 255678888888888776655554
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.75 E-value=4.1e-15 Score=149.80 Aligned_cols=151 Identities=13% Similarity=0.039 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
...+..-|+.........-.+.+++++.++++..|++++...+..++.++.++.|++.+|+ |+|+.++.|+.++++|+.
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 3334444444444466677788999999999999999999999999999999999999995 999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
++.=+.+ ..++..++++.++.+.|.+......++++..+.++++..+ -+++....+
T Consensus 94 lF~pAa~------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~------rlnl~q~fn 149 (422)
T COG0738 94 LFWPAAS------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAF------RLNLAQAFN 149 (422)
T ss_pred HHhhhhh------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHH------HHHHHHHhh
Confidence 9865441 2267889999999999999999999999999998753332 367777788
Q ss_pred HHHHHHHHHHHHHHHh
Q 045410 192 TVALVVALTAVVYIQT 207 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~ 207 (589)
.+|+.++|.+++.+..
T Consensus 150 ~lGa~~gp~~g~~lil 165 (422)
T COG0738 150 GLGAILGPLLGSSLIL 165 (422)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 8999999999999876
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.74 E-value=2.5e-15 Score=165.08 Aligned_cols=141 Identities=15% Similarity=0.015 Sum_probs=123.9
Q ss_pred HHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q 045410 57 RTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPE 136 (589)
Q Consensus 57 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 136 (589)
.+.+..+.....+..+++.++..+++++.|.++|| +|||++++++.++.+++.+..+++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~------------------- 169 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP------------------- 169 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------
Confidence 35678899999999999999999999999999999 6999999999999999999999988
Q ss_pred chhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHH
Q 045410 137 GWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFA 216 (589)
Q Consensus 137 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~ 216 (589)
+.+.+.+.|++.|++.++...+...++.|.+++ +.|+...++ ......++.+++.+++++.. +||+.++
T Consensus 170 --~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~------~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~ 238 (521)
T KOG0255|consen 170 --NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP------KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFW 238 (521)
T ss_pred --cHHHHHHHHHHHHhhccchhHHhHhhheeecCc------chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 788899999999999999999999999999987 457777777 66677788888888888887 8999999
Q ss_pred HHHHHHHHHHHH
Q 045410 217 IPTGCFFLSIVV 228 (589)
Q Consensus 217 ~~~~~~~i~~~~ 228 (589)
+..+..++.++.
T Consensus 239 ~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 239 IISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHH
Confidence 877665555444
No 100
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.74 E-value=5.6e-22 Score=213.63 Aligned_cols=397 Identities=14% Similarity=0.141 Sum_probs=219.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHH
Q 045410 65 ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILY 144 (589)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (589)
.+.+++.+...++..++.+++|+++||+ |||++++++.++..++.++.++++.. .+.+.+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~------------------~~~~~~~ 106 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY------------------NNFWMLL 106 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc------------------ccccccc
Confidence 4578999999999999999999999995 99999999999999999999987611 1566799
Q ss_pred HHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHhHHHHHHH
Q 045410 145 AGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN---VSWILGFAIPTGC 221 (589)
Q Consensus 145 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~g~~~~f~~~~~~ 221 (589)
++|++.|++.|...+....++.|..|++ .|+...++.+....+|..++..+.-.+.+. .+||..+.++.+.
T Consensus 107 ~~R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~ 180 (451)
T PF00083_consen 107 IGRFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIP 180 (451)
T ss_pred cccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999998873 356667777777788888877665444332 3599988877766
Q ss_pred HHHHHHHHHHh--hccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhh
Q 045410 222 FFLSIVVFLIG--YHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLD 299 (589)
Q Consensus 222 ~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (589)
.++.++...+. .|++...+.+.++ .++....+...+..+++.......
T Consensus 181 ~l~~~~~~~~~pESP~wL~~~~~~~~-------------------A~~~l~~~~~~~~~~~~~~~~~~~----------- 230 (451)
T PF00083_consen 181 SLLVLLLRFFLPESPRWLLSKGRDEE-------------------AEKVLRKLRGKEIEDEEIEEIKAE----------- 230 (451)
T ss_pred cccccccccccccccceecccccccc-------------------cccccccccccccccccccccccc-----------
Confidence 54433332222 2332211111111 011000000000000000000000
Q ss_pred hhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHH-hhhcchhhHHhhhhhcccccCcccccccc
Q 045410 300 KAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFL-AMDQQNTIGILQAIQTNKRFGSFNVPPGW 378 (589)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (589)
.+...+....|+.+.+... .+++++..+.+......... ....+.+.. ......+... .....
T Consensus 231 ----------~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i-~~~~~~~~~~----~~~~~ 294 (451)
T PF00083_consen 231 ----------KKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSI-FENAGISNSF----LATLI 294 (451)
T ss_pred ----------cccccccceeeeecccccc-cccccccccccccccccccccccccccccc-cccccccccc----ccccc
Confidence 0000000012222221111 12222222222221111110 001111111 1111111110 00111
Q ss_pred cchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhccCCCCccchhHH
Q 045410 379 MGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAG-FVERKRRLSALQHGSFESPISILV 457 (589)
Q Consensus 379 ~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 457 (589)
......++.++.. ...+|++||+ .+..+..+++++.+.++ ..... . +.....+...
T Consensus 295 ~~~~~~~~~~~~~--------~~~~~~GRr~-------~~i~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~ 351 (451)
T PF00083_consen 295 LGLVNFLGTLLAI--------FLIDRFGRRK-------LLIIGLLLMAICSLILGIIFFLG------V--SSSSWWSILS 351 (451)
T ss_pred ccccccccccccc--------cccccccccc-------ccccccccccccccccccccccc------c--cccccccccc
Confidence 1111222222221 2367776663 56677777777766664 11100 0 0000012222
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchh
Q 045410 458 LVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTL 537 (589)
Q Consensus 458 ~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~ 537 (589)
++...+..........+..+.+..|.+|.+.|+++.++....+.+++++++.+.+.+.+... .
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-----------------~ 414 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-----------------G 414 (451)
T ss_pred ceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------------c
Confidence 22222222333445567777889999999999999999999999888888887766543211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccccc
Q 045410 538 DYFYFTIAALEVVNLLYFNFFACRFVSSNAIGKKE 572 (589)
Q Consensus 538 ~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (589)
...|.++++++++..++.+++.+|+|+++.+|.++
T Consensus 415 ~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 415 WGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred cccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 13466777888888888888899999998888764
No 101
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=1.3e-15 Score=163.10 Aligned_cols=356 Identities=15% Similarity=0.106 Sum_probs=221.2
Q ss_pred HHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhh----hcccchHHHH-HHHHHHHHHHHHH
Q 045410 39 TFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSD----TYLGRFRTLL-YGSIASFLGMGIM 113 (589)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~l~-~~~~~~~~~~~~~ 113 (589)
+...+.++....++..|+++.+|+++...|.+..+..+..++..|+.|+++| | +||||..+ +|.+..+++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHh
Confidence 4455555666778999999999999999999999999999999999999999 7 59887666 5667777777666
Q ss_pred HHhhcCCC-CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHH
Q 045410 114 TLTASIPK-LRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFT 192 (589)
Q Consensus 114 ~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 192 (589)
.... |. ... ......+.+..++..++.........++..|..+++ ++|.+..++-.....
T Consensus 90 f~~~--p~~~~~------------~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~-----~~R~~l~~~~~~~~~ 150 (428)
T PF13347_consen 90 FSPP--PAGLSF------------TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDP-----DERTRLSSWRMIFSM 150 (428)
T ss_pred hccc--cchhhh------------hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccH-----hhhhhHHHHHHHHHH
Confidence 6542 21 000 012333466666778999999999999999998754 346667777666777
Q ss_pred HHHHHHHHHHHHHHhhc-------chhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccC
Q 045410 193 VALVVALTAVVYIQTNV-------SWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLG 265 (589)
Q Consensus 193 ~g~~~~~~~~~~l~~~~-------g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (589)
+|..+...+.+.+.+.. +|++...+.+++.++..++.....|+.+++.+++++ +.
T Consensus 151 ~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~---------------~~--- 212 (428)
T PF13347_consen 151 IGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK---------------KI--- 212 (428)
T ss_pred HHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc---------------cc---
Confidence 77766665655555322 577776666655555544444433331000000000 00
Q ss_pred CCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHH
Q 045410 266 QASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGI 345 (589)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 345 (589)
+ + +..++.. .+ .|.....+...+...
T Consensus 213 --~---~--------------------------------------------~~~~~~~----~~-nr~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 213 --S---L--------------------------------------------RDSLRSL----FR-NRPFRILLLAFFLQW 238 (428)
T ss_pred --c---c--------------------------------------------ccchhhh----cc-cchHHHHHHHHHHHH
Confidence 0 0 0000000 00 111111111112211
Q ss_pred HHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHH
Q 045410 346 FCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMA 425 (589)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~ 425 (589)
+.+........++.....+.+ . ..+....+..+..++..++..++ .+|+++|+ .+..+.++.
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~-~------~~~~~~~~~~~~~~v~~~~~~~l----~~r~gk~~-------~~~~~~~~~ 300 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNE-G------LISIFMLIFFVASIVGSPLWGRL----SKRFGKKK-------VYIIGLLLA 300 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCc-h------hhHHHHHHHHHHHHHHHHHHHHH----HHHcccee-------ehhhhHHHH
Confidence 222111111122222221111 1 12233334455556666665554 78876653 678888888
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccC-------chhhHHHHHHHHH
Q 045410 426 ILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLP-------ESMRTVSGAVFFL 498 (589)
Q Consensus 426 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~ 498 (589)
+++.++..+.. ..+.++..+..++.+++.+......+++..|..+ .+..|...|++++
T Consensus 301 ~~~~~~~~~~~---------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~ 365 (428)
T PF13347_consen 301 ALGFLLLFFLG---------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSF 365 (428)
T ss_pred HHHHHHHHHHH---------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhh
Confidence 88888877764 2356677778888999988888888888887776 3557999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccc
Q 045410 499 SLSISSYINSALVNIIHGLTK 519 (589)
Q Consensus 499 ~~~lg~~l~~~l~~~i~~~~~ 519 (589)
...++..+++.+.+.+.+..+
T Consensus 366 ~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 366 FIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHhC
Confidence 999999999999998886653
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.74 E-value=3.9e-15 Score=160.74 Aligned_cols=178 Identities=13% Similarity=0.081 Sum_probs=129.6
Q ss_pred chHH-HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhccc-----chHHHHH
Q 045410 28 WRSI-KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLG-----RFRTLLY 101 (589)
Q Consensus 28 ~~~~-~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~l~~ 101 (589)
++.. ..+....+...+. +.+...++.++.+++|+++++.+...+...+...+-++ +|.++||+ + ||+.+++
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~ 100 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVL 100 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHH
Confidence 4433 3344477888887 77888899999999999999999999988888888665 99999995 8 7777777
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLE 181 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (589)
+.++.. ......++. .+ .......+.+++.+++.+....+.-++..|..+ +++ +.++
T Consensus 101 ~~~l~~-~~~~~~l~~-~~-----------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~ 157 (468)
T TIGR00788 101 SGLLGS-AILYGLLPG-KV-----------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGP 157 (468)
T ss_pred HHHHHH-HHHHHhccc-cc-----------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCC
Confidence 766653 122222221 11 133344456788899999999999999999988 322 2234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 182 SFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
...++.+.+.++|..+|+.++|.+.+.++|+..|++.+.+.++..+..++
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~ 207 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL 207 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh
Confidence 45566666778999999999999999999999998877766655433333
No 103
>PTZ00207 hypothetical protein; Provisional
Probab=99.74 E-value=6.5e-14 Score=152.48 Aligned_cols=176 Identities=9% Similarity=0.032 Sum_probs=129.4
Q ss_pred CCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHH
Q 045410 24 PKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGS 103 (589)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~ 103 (589)
..++|..+.....+..+.... |++ ......+.+++|+|..+.+++.++.. ...++.++.|+++|| +|||++++++.
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~-y~f-sv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr-~G~R~vllig~ 98 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFM-YAF-NLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDY-LGPRPIFVLSM 98 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHH-hCcHHHHHHHH
Confidence 345666555544444444433 443 35566788999999999999988754 445677789999999 59999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 104 IASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 104 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
+++.+++++++++.+ ..+ ..+.+.+.+.|++.|+|.+...+....++.++||+ .|+..
T Consensus 99 ll~~iG~ll~ala~~-~~i--------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a 156 (591)
T PTZ00207 99 TVFCLGTLLFALTFQ-EVI--------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAV 156 (591)
T ss_pred HHHHHHHHHHHHHhc-ccc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHH
Confidence 999999999998631 000 12678899999999999999989899999999973 47788
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhhcchhHhHHHHHHHHHHHHH
Q 045410 184 FNWWYFSFTVALVV-ALTAVVYIQTNVSWILGFAIPTGCFFLSIV 227 (589)
Q Consensus 184 ~~~~~~~~~~g~~~-~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~ 227 (589)
.++......+|+.+ +++..+++.+ +|+..|++.+++.++..+
T Consensus 157 ~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 157 VAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHH
Confidence 99988898999864 6655555543 567666665554444333
No 104
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.73 E-value=1.1e-15 Score=151.98 Aligned_cols=119 Identities=16% Similarity=0.036 Sum_probs=104.6
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchh
Q 045410 60 YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQ 139 (589)
Q Consensus 60 lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 139 (589)
.+-+..-.|.+-+.|.+...+.++..|.++||| |||++++.|.+..++...+.+.+. +
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~---------------------~ 120 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR---------------------N 120 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH---------------------H
Confidence 334556789999999999999999999999997 999999999999999888888877 6
Q ss_pred HHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 140 LSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 140 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
...++++|++.|+..|- ...+-++++|.+++ +.|..+++....+..+|.++||+++|++..
T Consensus 121 F~afv~aR~l~Gi~kgn-l~v~rAiisdV~se------k~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGN-LSVIRAIISDVVSE------KYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhhccCc-hHHHHHHHHhhcCh------hhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 66688889999999876 57789999999987 346678999999999999999999999988
No 105
>PRK11462 putative transporter; Provisional
Probab=99.73 E-value=5.1e-14 Score=151.88 Aligned_cols=152 Identities=13% Similarity=0.139 Sum_probs=113.8
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchHHHH-HHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFRTLL-YGSIASFLGMG 111 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l~-~~~~~~~~~~~ 111 (589)
...+...+.+..+..++..|+++.+|+++...|.+..+.-+.-++.-|+.|+++||. +||||..+ ++.+.+.+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 455555666666678899999999999999999999999999999999999999973 69886665 45567777665
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
++... |.... ......+.+.-++..++..+......++.+|+.++. ++|.+..++.....
T Consensus 96 llf~~---p~~s~------------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~-----~eRt~l~s~r~~~~ 155 (460)
T PRK11462 96 LAYST---PDLSM------------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDP-----TQRISLQSWRFVLA 155 (460)
T ss_pred HHHhC---CCCCc------------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCH-----HHHHHHHHHHHHHH
Confidence 55543 32111 112344555556678888888888889999987653 56888999988888
Q ss_pred HHHHHHHHHHHHHHHh
Q 045410 192 TVALVVALTAVVYIQT 207 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~ 207 (589)
++|..+++.+...+..
T Consensus 156 ~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 156 TAGGMLSTVLMMPLVN 171 (460)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888777655544
No 106
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.72 E-value=9.2e-15 Score=151.40 Aligned_cols=391 Identities=12% Similarity=0.078 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+..+......|...+++-...++++.++++..|+|.++.|.+.++..+...+.+|+.|.++|| +|.||-++....+..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHH
Confidence 445555556666677767778999999999999999999999999999999999999999999 5977776655443322
Q ss_pred --HHHHH-HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 109 --GMGIM-TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 109 --~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
+.+.. .+.+.+.. + ++++.++.++..+.......++. |.+.+... + ..+.=++
T Consensus 86 l~~pff~~v~~pll~~-----------------n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~s-r--~~~feYG 141 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQS-----------------N---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERVS-R--RNGFEYG 141 (412)
T ss_dssp TCHHHHHHTHHHHHHT-----------------T----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHH-H--HHSS-HH
T ss_pred HHHHHHHHHHHHHHHH-----------------H---HHHHHHHHHHHHHHHHcccchHH-HHHHHHHH-H--HhcCCcc
Confidence 32222 22220000 1 34444444444444443333332 43321100 0 0111122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccC
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLG 265 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (589)
-..+.+.+|..++..++|.+.+ .+.+..|++.....++..++....++..+ ++.+ ..
T Consensus 142 ~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~---~~~~-------------------~~ 198 (412)
T PF01306_consen 142 RARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVP---PQAE-------------------VA 198 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SS---SSS--------------------SS
T ss_pred hHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCc---hhhh-------------------hh
Confidence 2344567888888889998886 56677888766554444333322221100 0000 00
Q ss_pred CCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHH
Q 045410 266 QASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGI 345 (589)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 345 (589)
+. . +.++++...-........|+.+..........
T Consensus 199 ~~--------~-------------------------------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~ 233 (412)
T PF01306_consen 199 DA--------L-------------------------------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVA 233 (412)
T ss_dssp TT--------S-------------------------------------SS------HHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred cc--------c-------------------------------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHHH
Confidence 00 0 00000000000000001122223333333333
Q ss_pred HHHHhhhcchh-hHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHH
Q 045410 346 FCFLAMDQQNT-IGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILM 424 (589)
Q Consensus 346 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l 424 (589)
..|..+.|+.+ ++..+ .+... .....++.++.+.++.=.+++ .+..++.+|.+. ++.+.++..+
T Consensus 234 ~~Y~vfdqqf~~y~~~~---f~~~~----~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~-------k~~Lllag~i 298 (412)
T PF01306_consen 234 AIYDVFDQQFPIYFASF---FQSAG----QGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGA-------KNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHT---SSSHH----HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-H-------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---hcccc----cChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcCh-------HhHHHHHHHH
Confidence 33334443333 33221 11110 112223333333333222221 223445777644 4578888888
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHH-HHHHHHH
Q 045410 425 AILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVF-FLSLSIS 503 (589)
Q Consensus 425 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~lg 503 (589)
+++=.+.+++.+ +.+++++.-.+.++-..+......-|+.+.+|++..++...+. +...++|
T Consensus 299 ~~iRi~~~~~~~-----------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 299 MAIRIIGSGFAT-----------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG 361 (412)
T ss_dssp HHHHHHHHHT-------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHhhhc-----------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence 888888888754 5667788889999988888999999999999999999999885 7888999
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 045410 504 SYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACR 561 (589)
Q Consensus 504 ~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 561 (589)
..+.+.+.|.+.|.. ++...|++.+++.+...++..+..++
T Consensus 362 ~~i~s~~~G~lyd~~-----------------G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 362 IIILSPLAGYLYDRI-----------------GFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHhhhHHhhHhhc-----------------CcHHHHHHHHHHHHHHHHHheeeecC
Confidence 999999999998743 24457888888877777776666444
No 107
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.69 E-value=5e-16 Score=157.79 Aligned_cols=410 Identities=13% Similarity=0.064 Sum_probs=218.8
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHH
Q 045410 62 MDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLS 141 (589)
Q Consensus 62 ~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 141 (589)
+++...+.+-.+..++..+++++.||++|| +|||+++-..+++++++++++++..+.+. ...-.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~~~~~--------------~~~~m~ 145 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSVGTTS--------------PLGVMM 145 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCCCCCC--------------Ccchhh
Confidence 678888899999999999999999999999 59999999999999999997777653332 012457
Q ss_pred HHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----------cc
Q 045410 142 ILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN-----------VS 210 (589)
Q Consensus 142 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----------~g 210 (589)
++...|+++|+|.|+-+|+..+..+|..-... +....+..++...++.-.|++++.++..-.-+. .=
T Consensus 146 ~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~--RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~v 223 (538)
T KOG0252|consen 146 TLCFFRFLLGIGIGGDYPLSATIMSESANKKT--RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGV 223 (538)
T ss_pred HHHHHHHHhhccccCCCcchHHHhhhhhhhcc--ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHH
Confidence 78899999999999999999999999654321 111233445556666667777666555444321 12
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHH-HHHHHHHhccccccCCCCCCCccCCCCCccccccccccC
Q 045410 211 WILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMA-KVITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKL 289 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (589)
||..|.+..+..+ ++++++.+ -|+.+....+. +....+..+.++..+. +..+++..+ .
T Consensus 224 WRl~~glg~vpa~---~~ly~Rl~-----M~Et~~Y~al~~~~~~~a~~d~~k~~~~---------~~~~~~~~~---~- 282 (538)
T KOG0252|consen 224 WRIIFGLGAVPAL---LVLYFRLK-----MPETARYTALVSKKLKQAAGDMKKVLSV---------DIEAESTAE---S- 282 (538)
T ss_pred HHHHHHHHHHHHH---HHHHhhhc-----CCcchhHHHHhhcCHhhhhhcccccccc---------ccchhhccc---c-
Confidence 8877766554433 22233221 11111111000 0000011111110000 000000000 0
Q ss_pred CCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHH-HHHHHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhcccc
Q 045410 290 PHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVE-QLKLLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKR 368 (589)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (589)
....+......|..+... ..++++. ....|++.-..+++..+.|..-++.-
T Consensus 283 ----------------------~~~~~~~~~~~F~~~f~~~hg~~Llg------t~~~WFllDiafy~~nL~~s~I~~~i 334 (538)
T KOG0252|consen 283 ----------------------DVPPPSNSFGLFSRLFLRWHGKHLLG------TAGTWFLLDIAFYGQNLFQSVIFSAI 334 (538)
T ss_pred ----------------------CCCCcccccchHHHHHHHHHHHHHHH------HHHHHHhhhhhhhccccHHHHHHHhh
Confidence 000001111111111000 1122222 22222222222333333333222211
Q ss_pred cCccccccc-ccchh--hHHHHHHHH---Hh-hhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 369 FGSFNVPPG-WMGLI--SMLTLSTWI---FF-YERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRL 441 (589)
Q Consensus 369 ~~~~~~~~~-~~~~i--~~~~~~~~~---~l-~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~ 441 (589)
. + .+.. .+... ...+..+.+ .+ .-|+..-..++++|| ..-+.|++++++.++.++..-.
T Consensus 335 g--~-~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-------~iq~~GF~~~~i~~~~~~~~y~---- 400 (538)
T KOG0252|consen 335 G--V-IPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-------YIQLMGFFIMTIFFFVIAGPYN---- 400 (538)
T ss_pred c--c-CCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-------HHHHhhHHHHHHHHHHHcCCcc----
Confidence 0 0 1111 11011 111211111 11 112222235666555 3668899999988887776431
Q ss_pred hhhccCCCCccchhHHHHHHHHHHHHH-HHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 045410 442 SALQHGSFESPISILVLVPQFSFSGLT-EGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKK 520 (589)
Q Consensus 442 ~~~~~~~~~~~~~~~~~i~~~~l~g~g-~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~ 520 (589)
+ ..+..-.++.+.+..+. ...-..+...+..|.+|.+.||+.-|++-.++-+|+.++........+..-
T Consensus 401 -------~--~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~y- 470 (538)
T KOG0252|consen 401 -------Q--LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNY- 470 (538)
T ss_pred -------c--ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccC-
Confidence 0 11111122233333332 222233444566799999999999999999999999999888776654210
Q ss_pred ccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Q 045410 521 YAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVSSNAIGKKES 573 (589)
Q Consensus 521 ~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (589)
+ ...++.+.+++++++..+..++.+++ +|.|++..++.+..
T Consensus 471 ----p-------~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~leei~~e 511 (538)
T KOG0252|consen 471 ----P-------PNIGVRNVFIILAGCMLLGILFTLLI-PETKGKSLEEISNE 511 (538)
T ss_pred ----C-------ccccchHHHHHHHHHHHHhHheeEEe-ecccccCHHHhcCh
Confidence 1 01134568889999999887777666 49898888877544
No 108
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.69 E-value=1.9e-15 Score=168.34 Aligned_cols=200 Identities=14% Similarity=0.146 Sum_probs=151.0
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
...+|.+++.++..++....+.+......+.++++++++.++.|++.+.+.++..++.++.|+++|| +||||.+.++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~l 106 (633)
T TIGR00805 28 FSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCA 106 (633)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHH
Confidence 3456655555555666666667777888888899999999999999999999999999999999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCC----------------CCCCCCC------------CCCCCC--chhHHHHHHHHHHHHHhh
Q 045410 105 ASFLGMGIMTLTASIPKLR----------------PPDCTGA------------QCPQPE--GWQLSILYAGLALLAIGS 154 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~----------------~~~~~~~------------~~~~~~--~~~~~~~~~~~~l~g~g~ 154 (589)
++++|.+++++.+.+-.-. ...|... .+...+ ...+..++++|+++|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 9999999988753110000 0001000 000001 113567889999999999
Q ss_pred ccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc----------------------chh
Q 045410 155 GGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNV----------------------SWI 212 (589)
Q Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------------------g~~ 212 (589)
+...+...+++.|.+|+ +.|+..+++++.+..+|..+|+++++++.+.+ +||
T Consensus 187 ~~~~~~~~~~i~d~~~~------~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKS------KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCc------cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 99999999999999987 34778899999999999999999999987543 277
Q ss_pred HhHHHHHHHHHHHHHHHHH
Q 045410 213 LGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 213 ~~f~~~~~~~~i~~~~~~~ 231 (589)
..|++.+++.++..+.++.
T Consensus 261 l~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7788777666555444443
No 109
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.68 E-value=4.5e-14 Score=150.92 Aligned_cols=148 Identities=16% Similarity=0.086 Sum_probs=124.8
Q ss_pred HHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q 045410 57 RTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPE 136 (589)
Q Consensus 57 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 136 (589)
.+++++...+.+.+.++|.+++.++.+++|+|.|| +.-.+.+....+++.+..++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 36788999999999999999999999999999999 4988888887777777666665555
Q ss_pred chhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH------hhcc
Q 045410 137 GWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQ------TNVS 210 (589)
Q Consensus 137 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~~g 210 (589)
+.+.+++.|++.|+.+++..|....+++.+|.+ ++|+..+++++.+..+|.++|.+++..+. ...|
T Consensus 133 --s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~------~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 133 --SFPGLIALRFLLGLFESGGWPGVVAILGNWYGK------SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred --hhHHHHHHHHHHHHHhcccchHHHHHHHhhcCh------hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 667799999999999999999999999999987 45777899999999999999998887753 3468
Q ss_pred hhHhHHHHHHHHHHHHHHHHHh
Q 045410 211 WILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
|||.|++.+++.+...++.++.
T Consensus 205 W~~~FiI~G~i~~~~gi~~f~~ 226 (495)
T KOG2533|consen 205 WRWLFIIEGVITLVLGIVVFFF 226 (495)
T ss_pred ceeehhHHHHHHHHHHheEEEE
Confidence 9999999888766555544443
No 110
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=4.9e-15 Score=148.16 Aligned_cols=147 Identities=14% Similarity=0.075 Sum_probs=133.9
Q ss_pred hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCch
Q 045410 59 KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGW 138 (589)
Q Consensus 59 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 138 (589)
.++-.+++.|++.+++.+.+.+..++.|.+.|| +|+|-.+++|..++...++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 467789999999999999999999999999999 6999999999999999999999988
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHH
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIP 218 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~ 218 (589)
+++.++++|.++|+|.++...+..++++|.||++ ++|++.+++.-....+|-.+||..+|.+=+..|.+.+|.+.
T Consensus 158 sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d-----~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL 232 (464)
T KOG3764|consen 158 SYPMLFVARSLQGVGSAFADTSGLAMLADVFPED-----NERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVL 232 (464)
T ss_pred hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccc-----hhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHH
Confidence 6778999999999999999999999999999986 46788999988889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHh
Q 045410 219 TGCFFLSIVVFLIG 232 (589)
Q Consensus 219 ~~~~~i~~~~~~~~ 232 (589)
+++.++-.++-++.
T Consensus 233 ~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 233 AIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHHHHHHHHhe
Confidence 88777666554444
No 111
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=4.3e-14 Score=139.62 Aligned_cols=166 Identities=14% Similarity=0.058 Sum_probs=121.6
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
+..+++..........+.+-+...+|.+..+..++......+..+++-.+|.++|+ +|||+.+.+..+...+...+-..
T Consensus 84 g~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~is~~ 162 (528)
T KOG0253|consen 84 GMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVISGA 162 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHhhcC
Confidence 34455555555555556666667789999999999999999999999999999999 59999998887766665555555
Q ss_pred hhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHH
Q 045410 116 TASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVAL 195 (589)
Q Consensus 116 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (589)
++ ++..+++.|.+.|+|.|+ .|...++-.|.-|... |...+-.. ....+|.
T Consensus 163 sp---------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~ 213 (528)
T KOG0253|consen 163 SP---------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQ 213 (528)
T ss_pred CC---------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHH
Confidence 44 566788999999999999 8999999999887632 22223222 3456788
Q ss_pred HHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 196 VVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 196 ~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
++...+.-....++||||..........+...+.++
T Consensus 214 v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w 249 (528)
T KOG0253|consen 214 VFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVW 249 (528)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhh
Confidence 888777666677889999877766444333333333
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.9e-13 Score=143.09 Aligned_cols=369 Identities=12% Similarity=0.108 Sum_probs=221.8
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchHHH-HHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFRTL-LYG 102 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l-~~~ 102 (589)
.+|..+--....+...+.+-.+..++..|+++..|+++..+|.+..+.-+.-++.-|+.|.++||. +||||.. +++
T Consensus 10 s~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g 89 (467)
T COG2211 10 SLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG 89 (467)
T ss_pred cHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH
Confidence 444444444566666677777789999999999999999999999999999999999999999975 6877655 455
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhh
Q 045410 103 SIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLES 182 (589)
Q Consensus 103 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 182 (589)
.+-.++.+.++..++... ........++--.+.+++...+.-...++.+++.++. ++|.+
T Consensus 90 ~ip~~i~~~l~F~~p~~~---------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~-----~ER~~ 149 (467)
T COG2211 90 AIPFAIVAVLLFITPDFS---------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDP-----QERAS 149 (467)
T ss_pred hHHHHHHHHHHHcCCCcc---------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCH-----HHHHH
Confidence 577777777777654111 0123344455557788999998888889999987654 56888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-------cchhHhHHHHHHHHHHHHHHHHHhhcc-ccccCCCCChHHHHHHHHH
Q 045410 183 FFNWWYFSFTVALVVALTAVVYIQTN-------VSWILGFAIPTGCFFLSIVVFLIGYHT-YIIKNPQGSVFVDMAKVIT 254 (589)
Q Consensus 183 ~~~~~~~~~~~g~~~~~~~~~~l~~~-------~g~~~~f~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 254 (589)
..++-....++|..+...+.+.+... .||+..-.+.+++.++.++.-++..++ ..++.+.++..+
T Consensus 150 l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~------- 222 (467)
T COG2211 150 LTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK------- 222 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc-------
Confidence 89998888888877777666666543 345544333333333333322222222 111111110000
Q ss_pred HHHhccccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHH
Q 045410 255 ASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLL 334 (589)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (589)
.++.++... ....|.+
T Consensus 223 ----------------------------------------~~~~~~~~~------------------------~~~Nrp~ 238 (467)
T COG2211 223 ----------------------------------------LKLKDSFLL------------------------IFKNRPL 238 (467)
T ss_pred ----------------------------------------ccHHHHHHH------------------------HHccchH
Confidence 000000000 0011111
Q ss_pred HhHHHHHHHHHHHHHhhhcchhhHHhhh-hhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCC
Q 045410 335 VAMFPVWITGIFCFLAMDQQNTIGILQA-IQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLT 413 (589)
Q Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~ 413 (589)
+..+...++ .+...+...+...++. ..++.. +..+...........+++.++ ..++.+|+++|
T Consensus 239 ~~~l~~~l~---~~~~~~i~~s~~~yy~~y~lg~~----~l~~~~~~~~~~~~~l~~~~~----~p~L~~~~gkk----- 302 (467)
T COG2211 239 LLLLLMNLL---LFIAFNIRGSIMVYYVTYVLGDP----ELFAYLLLLASGAGLLIGLIL----WPRLVKKFGKK----- 302 (467)
T ss_pred HHHHHHHHH---HHHHHHHHhhhhheeEEEEcCCh----HHHHHHHHHHHHHHHHHHHHh----HHHHHHHhchH-----
Confidence 121211211 1221222222222111 111111 111222222223333333444 33347776555
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhc-------cCc
Q 045410 414 MRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQ-------LPE 486 (589)
Q Consensus 414 ~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~-------~P~ 486 (589)
+...++.++.+++.++..+.+ ..+...+++...+.++|.+...+..++++.|. .-.
T Consensus 303 --~~~~~~~~~~~i~~~~~~f~~---------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~ 365 (467)
T COG2211 303 --KLFLIGLLLLAVGYLLLYFTP---------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGV 365 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHhhc---------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCC
Confidence 477888888888888887764 23444555666778888888888888887765 456
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045410 487 SMRTVSGAVFFLSLSISSYINSALVNIIHGLTK 519 (589)
Q Consensus 487 ~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~ 519 (589)
+..|...+.+.+..-+|.+++..+.+++.+..+
T Consensus 366 R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 366 RREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 678999999999999999999999999987653
No 113
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.64 E-value=1.7e-12 Score=129.10 Aligned_cols=345 Identities=13% Similarity=0.103 Sum_probs=221.8
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
..++++.+--+....+ ...+..-+.+++|+|.+.+|.+.++..+...+.+++..+++.| +|..|.+..++++..+|..
T Consensus 15 ~gIvlia~NLR~~its-vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~ 92 (395)
T COG2807 15 AGIVLIAFNLRPAITS-VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGIL 92 (395)
T ss_pred HHHHHHHhccchhhhh-hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHH
Confidence 3333444444444333 3445667888999999999999999999999999999999999 5999999999999999988
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
+=... +...++.+-.+.|.|.+......++++-+.||+ +.+..+++|..+.
T Consensus 93 iR~~~----------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-------~~~~mtglYs~sl 143 (395)
T COG2807 93 IRSLG----------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-------RVGLMTGLYSTSL 143 (395)
T ss_pred HHhcc----------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-------chhhHHhHHHHHH
Confidence 87663 235588888999999999999999999999985 3456788899999
Q ss_pred HHHHHHHHHHHHHHHhhc-chhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCC
Q 045410 192 TVALVVALTAVVYIQTNV-SWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGN 270 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (589)
.+|+.+++.+...+.++. |||..+.+=+...++++++.+....+ ++.+..+. +..
T Consensus 144 ~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r--~~~~~~~~-------------------~~~--- 199 (395)
T COG2807 144 GAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALR--EQAASIAT-------------------KLV--- 199 (395)
T ss_pred HHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccc--cccccccc-------------------ccc---
Confidence 999999999998888877 79988776555555555443332111 10000000 000
Q ss_pred CccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHh
Q 045410 271 SLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLA 350 (589)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 350 (589)
++..-|++ ...+... +-+-+....+|..
T Consensus 200 --------------------------------------------~~~~vw~~-----~~aW~vt---LfmGlqS~~~Y~~ 227 (395)
T COG2807 200 --------------------------------------------SVRKVWRS-----PLAWQVT---LFMGLQSLLYYIV 227 (395)
T ss_pred --------------------------------------------cccccccC-----chhHHHH---HHHHhhHHHHHHH
Confidence 00111211 0011111 1122444556666
Q ss_pred hhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 045410 351 MDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLL 430 (589)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l 430 (589)
+.+.+.+...+ +++... .+.+..+..+..+....+.-. +.+|..+ .+........++.++++
T Consensus 228 ~~WLP~ili~~--G~sa~~------aG~llsl~~l~~~~~~ll~P~----la~R~~n------~r~~~~~~~~~~l~G~~ 289 (395)
T COG2807 228 IGWLPAILIDR--GLSAAE------AGSLLSLMQLAQLPTALLIPL----LARRSKN------QRPLVVLALLLMLVGLV 289 (395)
T ss_pred HHHHHHHHHHc--CCCHHH------hhhHHHHHHHHHHHHHHHHHH----HHHHhcc------cchHHHHHHHHHHHHHH
Confidence 66555555433 333322 222222222222222222111 2444332 22355666666666666
Q ss_pred HHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccC-chhhHHHHHHHHHHHHHHHHHHHH
Q 045410 431 VAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLP-ESMRTVSGAVFFLSLSISSYINSA 509 (589)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~l~~~ 509 (589)
.+.+.+. ...++| .++.|+|.+..+|....++...+. ++..+.-.|+.+..+.+-..+||.
T Consensus 290 G~~~~P~--------------~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 290 GLLLAPG--------------QLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred HHHHhhh--------------hHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 6655531 112222 478899999999998888887764 445566777888888899999999
Q ss_pred HHHHhhhccc
Q 045410 510 LVNIIHGLTK 519 (589)
Q Consensus 510 l~~~i~~~~~ 519 (589)
+.|.+.|.++
T Consensus 352 l~G~lhDa~g 361 (395)
T COG2807 352 LFGFLHDATG 361 (395)
T ss_pred hHhHHHHhcC
Confidence 9999999765
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.54 E-value=3.7e-11 Score=122.65 Aligned_cols=346 Identities=11% Similarity=0.072 Sum_probs=202.6
Q ss_pred HHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhccc-----chHHH-HHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC
Q 045410 57 RTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLG-----RFRTL-LYGSIASFLGMGIMTLTAS-IPKLRPPDCTG 129 (589)
Q Consensus 57 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~l-~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~ 129 (589)
..+++++..-.+.+++...+... ..+..|+.||++ + ||-.+ ..|.+++..+..+..++.- +.+...+.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~--- 81 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQS--- 81 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccc---
Confidence 35788999999999888877665 599999999996 8 66544 4556666666666655421 11100000
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045410 130 AQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNV 209 (589)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 209 (589)
.+..........+..++.|+|.+...+...+++.|..|+ ++|.+..++.|.+..+|.+++.++.+.+.+.+
T Consensus 82 ---~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e------~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 82 ---SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPE------ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred ---ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCH------hhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 000011122344455678999999999999999999887 45778899988899999999999999988877
Q ss_pred chhHhHH----HHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCCccccccc
Q 045410 210 SWILGFA----IPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLTQSETESK 285 (589)
Q Consensus 210 g~~~~f~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (589)
+..-..- .+.+...+.++..+...++.++..+..++
T Consensus 153 s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~---------------------------------------- 192 (403)
T PF03209_consen 153 SPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAER---------------------------------------- 192 (403)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCC----------------------------------------
Confidence 6432222 22222223333333323322211100000
Q ss_pred cccCCCCcchhhhhhh-hhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcchhhHHhhhhh
Q 045410 286 TTKLPHTNRFRCLDKA-AVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQNTIGILQAIQ 364 (589)
Q Consensus 286 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (589)
++..+.+.. .+..+ .+.++.+..+ ++....+++ .. . + ...
T Consensus 193 -------~~~~f~~a~~~~~~~----------------------~~a~~f~~fl--~l~t~a~~~-QD---~--i--LEP 233 (403)
T PF03209_consen 193 -------PRPPFREAWRQVWAS----------------------PQARRFFVFL--FLGTLAFFM-QD---V--I--LEP 233 (403)
T ss_pred -------CCccHHHHHHHHHhC----------------------CChhHHHHHH--HHHHHHHHh-hH---H--H--cCC
Confidence 000000000 00000 0011111111 111111110 00 0 0 001
Q ss_pred cccccCcccc-cccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045410 365 TNKRFGSFNV-PPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSA 443 (589)
Q Consensus 365 ~~~~~~~~~~-~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~ 443 (589)
+..++++++. .......+-..+.+++..+.++... +|. ++.+...+|+.+..+++.+..+...
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~---~~~-------~~~~~a~~G~~~~~~~f~lii~a~~------ 297 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLS---RRL-------GKKRTAALGCLLGALAFALIILAGP------ 297 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCC-------CchHHHHHHHHHHHHHHHHHHHHHh------
Confidence 1112212111 1233344445566666666555422 222 2234566788888888777666542
Q ss_pred hccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 045410 444 LQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTK 519 (589)
Q Consensus 444 ~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~ 519 (589)
..+.+.+.+..++.|++.+.......+...++++++..|+.+|.|..++.++..++..+++.+.|...
T Consensus 298 --------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 298 --------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred --------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22455667788999999999999999999999999999999999999999999999999999998764
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.53 E-value=8.7e-11 Score=126.22 Aligned_cols=360 Identities=15% Similarity=0.113 Sum_probs=192.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHH
Q 045410 65 ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA-SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSIL 143 (589)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (589)
+-.++..++..+..++..|+.|-++|+. |+||.++....+ .++.+..+.+.. | ++.+..
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--~-----------------~~~~~~ 129 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--P-----------------GQWWLA 129 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--c-----------------chHHHH
Confidence 3346778899999999999999999995 888777766554 444555555543 1 144444
Q ss_pred HHHHHHHHHhhccccccHHHHhhccCCCCCCCcch--------------------hhhhHHHHHHHHHHHHHHHHHHHHH
Q 045410 144 YAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKS--------------------QLESFFNWWYFSFTVALVVALTAVV 203 (589)
Q Consensus 144 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~r~~~~~~~~~~~~~g~~~~~~~~~ 203 (589)
.+..++..++.+.......+++.|+.++++..+.. .|++..+.-+..+++|+++...+.-
T Consensus 130 ~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l 209 (477)
T PF11700_consen 130 LVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISL 209 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 44444555666666778889999988775431100 1245555555567778877766654
Q ss_pred HHHhh--------cchhHhHHHHHHHHHHHHHHHHHhhccccc--cCCC-CChHHHHHHHHHHHHhccccccCCCCCCCc
Q 045410 204 YIQTN--------VSWILGFAIPTGCFFLSIVVFLIGYHTYII--KNPQ-GSVFVDMAKVITASCRKRKVNLGQASGNSL 272 (589)
Q Consensus 204 ~l~~~--------~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (589)
.+... .+.|..+.+.++..++..+-.++..|+.+. ..|. .+......+.+...+|+
T Consensus 210 ~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~------------- 276 (477)
T PF11700_consen 210 LLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE------------- 276 (477)
T ss_pred HHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH-------------
Confidence 44322 224666666665544443333333332211 0111 11111111111111111
Q ss_pred cCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 045410 273 YDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMD 352 (589)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 352 (589)
....|.+...+ +.++....
T Consensus 277 -------------------------------------------------------~~~~~~~~~fL------ia~~l~~d 295 (477)
T PF11700_consen 277 -------------------------------------------------------IRKLRQLFLFL------IAYFLYSD 295 (477)
T ss_pred -------------------------------------------------------HHhChHHHHHH------HHHHHHHH
Confidence 01112222211 11111112
Q ss_pred cchhhHH------hhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHH
Q 045410 353 QQNTIGI------LQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAI 426 (589)
Q Consensus 353 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~ 426 (589)
...+... ....+++. .....+..+..+..+++..+++++ .+|++.|++ +.+.+++++..
T Consensus 296 g~~ti~~~~~i~a~~~lg~s~------~~l~~~~l~~~i~a~~Ga~~~g~l----~~r~g~k~~-----~~l~~~l~~~~ 360 (477)
T PF11700_consen 296 GVNTIISFAGIYATEVLGMST------TQLIVFGLVVQIVAIIGALLFGWL----QDRFGPKTK-----RTLLISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHhcCcCH------HHHHHHHHHHHHHHHHHHHHHHHH----HHHhCCchh-----HHHHHHHHHHH
Confidence 2222111 11112111 111222333344444444554444 777765421 23333333332
Q ss_pred HHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHH
Q 045410 427 LSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYI 506 (589)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 506 (589)
+.. +.++.... .+. .| ..+.+.+.+.-++.|+..+...+..-++..++.|++.++...|++.+....++++
T Consensus 361 ~i~-~~g~~G~~-~~~---~g----~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~l 431 (477)
T PF11700_consen 361 IIP-LYGLFGFW-PSF---FG----LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWL 431 (477)
T ss_pred HHH-HHHHHHhh-hcc---cC----cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 222 22222100 000 00 1123334445667888888888999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 045410 507 NSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFF 558 (589)
Q Consensus 507 ~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 558 (589)
||.+.+.+.+.++ +..+.+..+.++.++++++.+.+
T Consensus 432 GPll~g~i~~~tg----------------~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 432 GPLLFGLITDATG----------------SQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHhC----------------CchhHHHHHHHHHHHHHHHHhhc
Confidence 9999999987653 12345666777777776666444
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=2.6e-13 Score=129.45 Aligned_cols=367 Identities=13% Similarity=0.122 Sum_probs=219.7
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045410 49 IANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCT 128 (589)
Q Consensus 49 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 128 (589)
..-+..+...+.+++.++..++.++|+.=-.+.+.++|++.||.+|-|..-++-++...+|.++++...
T Consensus 63 p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg----------- 131 (459)
T KOG4686|consen 63 PGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG----------- 131 (459)
T ss_pred chhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch-----------
Confidence 355778888888899999999999999999999999999999999999887777888888988888754
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 129 GAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN 208 (589)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 208 (589)
...+.|+...+|+++|+|.-....+.+.+...+|.. ++....++++-....+|......+.+++-+.
T Consensus 132 -------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKG------KELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 132 -------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKG------KELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred -------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecC------ccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 113789999999999999888877888888888865 4577889998888889988887777887765
Q ss_pred cchhH------hHHH----HHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCC
Q 045410 209 VSWIL------GFAI----PTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLT 278 (589)
Q Consensus 209 ~g~~~------~f~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (589)
.+=-. ...+ ........++.... . ...+++.+ +-++..+..
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~-l----------------------g~~D~rAe------rilh~e~g~ 249 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALS-L----------------------GLSDDRAE------RILHLEEGF 249 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH-h----------------------hhhhhHHH------HHHhhhcCc
Confidence 43111 1110 00000011111000 0 00000000 000000000
Q ss_pred ccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHHHHHHHHHHHhhhcchh--
Q 045410 279 QSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPVWITGIFCFLAMDQQNT-- 356 (589)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-- 356 (589)
-|+.+. .+.+++.+.- ...+.+.+..+++...-+.+
T Consensus 250 ----------------------------------~Ge~pk------Ltdv~~f~pp--fw~~~iicv~yyva~fPFi~lg 287 (459)
T KOG4686|consen 250 ----------------------------------LGEEPK------LTDVNTFYPP--FWVLVIICVLYYVAWFPFITLG 287 (459)
T ss_pred ----------------------------------ccCCcc------cccccccCcc--HHHHHHHHHHHHHHHHHHhhhh
Confidence 000000 0000111100 01122233333333332222
Q ss_pred -hHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 045410 357 -IGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFV 435 (589)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~ 435 (589)
++...-.+.+. ..++.+.........+..|+++.+ .+|.+++ .+++..+.+....+-....+.
T Consensus 288 ~~fF~~rfGlS~------~~a~~i~s~vy~Isav~spvfg~i----~Dk~G~n------~~wv~~a~~~tl~~H~~l~Ft 351 (459)
T KOG4686|consen 288 PMFFQKRFGLSA------VSAGNILSTVYGISAVLSPVFGAI----SDKYGFN------LWWVASACILTLLGHSGLFFT 351 (459)
T ss_pred HHHHHHhhCCCh------hhccchhhhhhhhhhhhhhhHHHh----Hhhhcce------ehhHHHHHHHHHHHhhhHHhh
Confidence 22111111111 223333333444455666776666 6666543 235555555555555544443
Q ss_pred HHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 436 ERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIH 515 (589)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 515 (589)
. +.....+.++|+.........|-.+....|++.-|++.|+.+..+++|-++.+.+.+++.
T Consensus 352 ~-------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 352 F-------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred h-------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 2 122346788889888888888899999999999999999999999999999999999887
Q ss_pred hccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 045410 516 GLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFF 558 (589)
Q Consensus 516 ~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 558 (589)
|..+ + ....+.+|..+..+++....+.+..
T Consensus 413 d~~g-----~--------y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 413 DGDG-----S--------YDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred cCCC-----c--------hhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 6321 1 1123445666666665555444433
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=3.1e-12 Score=135.34 Aligned_cols=175 Identities=14% Similarity=0.064 Sum_probs=131.7
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
+|..+..+.+.+.....++....+++.|+++++|+++.+.+.+.+...+...++.+++|+++|| +|||+.+..+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~ 293 (393)
T PRK15011 215 RRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGV 293 (393)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHH
Confidence 3433434444444445555566788999999999999999999888888888899999999999 599998887766555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
+....+.... +.+.+++.+++.+++.|...+..+.+..|.+|+ .+++..+++
T Consensus 294 ~~~~~~~~~~---------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-------~~g~~~~~~ 345 (393)
T PRK15011 294 CFYAGMLMAH---------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-------QAGSATTLY 345 (393)
T ss_pred HHHHHHHHHh---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CcchHHHHH
Confidence 5444333333 456667778888777777777777888888874 245678888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+...++|..+++.++|.+.+.+||+..|++..++.+++++..+.
T Consensus 346 ~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 346 TNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 78889999999999999999899999998877776666655544
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.47 E-value=4.6e-12 Score=132.96 Aligned_cols=193 Identities=15% Similarity=0.153 Sum_probs=141.8
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHH-hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccc-h
Q 045410 19 PDSQRPKGGWRSIKYILGNETFEKLASMSLIANMTVYLRT-KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGR-F 96 (589)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r 96 (589)
.+...++.+||++++.....|+....++.+.+..-+|+++ +.+-+.+-.|+++++..++.+++.+..|++..|. |. |
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k 102 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVK 102 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcc
Confidence 3344557899999999999999999998888888899874 4788899999999999999999999999999995 76 8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCc
Q 045410 97 RTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKG 176 (589)
Q Consensus 97 ~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 176 (589)
+.++.|.++.++|.++.......|. ...+.++++|++.|+|.+. .+..=+|+++.-..
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~----------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~----- 160 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPN----------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTV----- 160 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc----------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCc-----
Confidence 8899999999999999944433443 2678899999999999765 56677888884433
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hc------c---hhHhHHHHHHHHHHHHHHHHHhhcc
Q 045410 177 KSQLESFFNWWYFSFTVALVVALTAVVYIQT----NV------S---WILGFAIPTGCFFLSIVVFLIGYHT 235 (589)
Q Consensus 177 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----~~------g---~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (589)
+.|.++++....+..+|.++||.+...+.. .+ . +..+-++.+++.++.++.+++..++
T Consensus 161 -~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 161 -EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred -cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 235566666555556666777666544431 11 1 2234455555555555554444443
No 119
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.46 E-value=8.7e-12 Score=127.40 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=104.0
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTG 129 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 129 (589)
+.+..|..+.+| +....-|+..+|++.+....+.+-|+.|+ +|-|.+++++..+-.+|..+=..+. .|.+.+
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~----- 136 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIRLISS-LPFVPP----- 136 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhcc-Cccccc-----
Confidence 445667777788 88888999999999999999999999999 5999999999999999999987764 443222
Q ss_pred CCCCCCCchhHH--HHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 130 AQCPQPEGWQLS--ILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 130 ~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
..+ +...+..+.+.+.-.+.....-+.+-+|+++ +|+.+..+-.+++.+|..++.++...+..
T Consensus 137 ---------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~------qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 137 ---------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPD------QRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred ---------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcc------hhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 333 6678888888888777777667777788874 46677777666777777777666555543
No 120
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.44 E-value=9.8e-12 Score=135.50 Aligned_cols=179 Identities=16% Similarity=0.112 Sum_probs=130.0
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+|+.+.......++..+.+|++..+++.|+++.+|++..+.+.+.....++..++.+++|+++|| +|||++++.+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 34544444445566778889999999999998899999888888888888999999999999999 59999998887655
Q ss_pred HHHHHHH-HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 107 FLGMGIM-TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 107 ~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
.++...+ .... . .+...+++++++.+++.+...+....++.|.+|+ +.|+++++
T Consensus 327 ~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~------~~Rg~~~g 381 (490)
T PRK10642 327 FVLAIPAFILIN-S------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPT------HIRYSALA 381 (490)
T ss_pred HHHHHHHHHHHh-C------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------ccchHHHH
Confidence 5443332 2221 0 1345677788888887777777788888999987 45778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+.+....+++.++|.+.+++.+..+ |+.++++..+..++.++..++
T Consensus 382 ~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 382 AAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 7555556677889999999887654 666665544444444444443
No 121
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.40 E-value=1.8e-11 Score=128.20 Aligned_cols=163 Identities=13% Similarity=0.055 Sum_probs=127.9
Q ss_pred HHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhh
Q 045410 38 ETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTA 117 (589)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~ 117 (589)
.++.....+.....++.|+.+++|.++.+.+++.+.......++.+++|+++|| +|||+++.++.++..+......+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHHH
Confidence 334334444455678889988999999999999888877788889999999999 5999999888776555554444433
Q ss_pred cCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHH
Q 045410 118 SIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVV 197 (589)
Q Consensus 118 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 197 (589)
+.+.+++.+++.|++.+...+....+..|..|+ ++++.+++++...++|..+
T Consensus 287 ---------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 338 (375)
T TIGR00899 287 ---------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-------RAGAATTLYTNTGRVGWII 338 (375)
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-------hhhHHHHHHHHHHHHHHHH
Confidence 556677778888988888888888888898764 2347788888889999999
Q ss_pred HHHHHHHHHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 198 ALTAVVYIQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 198 ~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
+|.+.+.+.+..||+..|++.++..+++.++.
T Consensus 339 g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 339 AGSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999988777666655544
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.40 E-value=7.6e-12 Score=130.57 Aligned_cols=167 Identities=19% Similarity=0.124 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+......++..+.........+.|. +++|.++.+.+.+.+.+.++..++.++.|+++|| +|||+.+.++.++..++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 208 WVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHH
Confidence 3333344444444444555566665 5789999999999999999999999999999999 5999999999888888877
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
.+.+..+ .+...++...++.+++.+...+..++++.|.+|+ +.|++.+++++...
T Consensus 286 ~~~~~~~-------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~ 340 (377)
T TIGR00890 286 AMLFIPM-------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP------ANSAANYGFLYTAK 340 (377)
T ss_pred HHHHccc-------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhh------hhhhhHhHHHHHHH
Confidence 7766441 0223345566778888888888888999999986 34778899999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQTNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~ 225 (589)
++|..++|.+.+.+.+..||++.|.+.+++.+++
T Consensus 341 ~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 341 AVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999999999998877665544
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.40 E-value=1.8e-11 Score=129.69 Aligned_cols=165 Identities=12% Similarity=0.105 Sum_probs=130.6
Q ss_pred HHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhc
Q 045410 39 TFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTAS 118 (589)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s 118 (589)
.+..++++.+..+++.|+.+ .|. .+.+...+.+.++..++.++.|++.|| +||||.+..+.++..++.....+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 34455666677888888764 465 345666778888888999999999999 5999999988888888877776654
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 045410 119 IPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVA 198 (589)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 198 (589)
+.+.+++.+++.|++.+...+.......|.+|+ +.|++.+++++...++|..++
T Consensus 301 --------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 301 --------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP------QNRGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred --------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHH
Confidence 455677788899999998888888888887775 458889999999999999999
Q ss_pred HHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 199 LTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 199 ~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
+.+.|++.+..||+..|++.+++.+++++......+
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999877776666655554444
No 124
>PRK03699 putative transporter; Provisional
Probab=99.40 E-value=1.9e-11 Score=129.38 Aligned_cols=168 Identities=15% Similarity=0.096 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
.++......++.....+++..++|.|+++.+|++..+.+.+.+.+.++..++.+++|+++|| +|||+.+.....+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHH
Confidence 44445556666667778888999999999999999999999999999999999999999999 59999998877766665
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
..+..... +.+...+..++.|++.+...+...++..|..|.+ +++..++.+.
T Consensus 285 ~~~~~~~~---------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~ 336 (394)
T PRK03699 285 MYLFVNTD---------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILT 336 (394)
T ss_pred HHHHHHcC---------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHH
Confidence 55544433 3334555567788888878888888888876532 2234667677
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHH
Q 045410 190 SFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSI 226 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~ 226 (589)
+.++|..++|.+.|++.+..|++..+++..++.++..
T Consensus 337 ~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (394)
T PRK03699 337 CGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVF 373 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHH
Confidence 7889999999999999999999998887665554443
No 125
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=1.5e-11 Score=133.33 Aligned_cols=177 Identities=12% Similarity=-0.024 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+.++.+....++....++++..++|.|+++.+|++..+.++..+...++..++.+++|+++|| +|||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHH
Confidence 346666677777777888888999999999999999999999999999999999999999999 4999887766554444
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
+.....+.. . .+.....+.+++.|+..............|.+|+ +.|+++.++.+
T Consensus 337 ~~~~~~~~~--~-----------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~------~~~g~a~gi~~ 391 (467)
T PRK09556 337 IFTLGVYQH--A-----------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPK------KAIGVANGIKG 391 (467)
T ss_pred HHHHHHHHh--c-----------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch------hhHHHHHHHHH
Confidence 332222221 0 1344455666666754433333334566788886 45888999998
Q ss_pred HHHHH-HHHHHHHHHHHHHh------------hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 189 FSFTV-ALVVALTAVVYIQT------------NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 189 ~~~~~-g~~~~~~~~~~l~~------------~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
...++ |..++|.+.|++.+ ..+|+..|.+..+..+++.+..+.
T Consensus 392 ~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 392 TFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 88886 77899999999999 568999998876666665554443
No 126
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.37 E-value=7.1e-12 Score=131.63 Aligned_cols=167 Identities=13% Similarity=0.016 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+..+......++....++.+.++++.|+++.+|.+..+.+.+.....+...++.++.|+++|| +|||+.++.+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHH
Confidence 345666667777788888888999999998999999999999999999999999999999999 5999988866555444
Q ss_pred HH-HHH-HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 109 GM-GIM-TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 109 ~~-~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.. ... .+.. + .+.+.++...++.+++.+...+...+++.|.+|++ .|++++++
T Consensus 298 ~~~~~~~~~~~--~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~~~~~~~ 352 (394)
T TIGR00883 298 LAVPLLMALLD--S-----------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTE------VRYTGASL 352 (394)
T ss_pred HHHHHHHHHhc--C-----------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCcc------ceeeEeee
Confidence 33 222 2211 0 14455667778888888888999999999999874 34455666
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHH
Q 045410 187 -WYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGC 221 (589)
Q Consensus 187 -~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~ 221 (589)
+..+..+|..++|.+++++.+..| |++.++...+.
T Consensus 353 ~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 353 AYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred hhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 445567889999999999999888 87766654443
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.37 E-value=2.6e-11 Score=136.18 Aligned_cols=134 Identities=15% Similarity=0.046 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 045410 69 NVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLA 148 (589)
Q Consensus 69 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (589)
....+..++..++.+++|+++|| +|||++++++.++.+++.+++++.. +...+++.++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~---------------------s~~~ll~~~~ 656 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN---------------------SESAMIALLC 656 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc---------------------cHHHHHHHHH
Confidence 33556667888999999999999 5999999999999999888887765 3445666677
Q ss_pred HHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHH
Q 045410 149 LLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 149 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~ 228 (589)
+.++..+...+...++++|++|+ +.|++++++.+....+|++++|.+++.+.+. +...+|++.+++.+++.++
T Consensus 657 l~g~~~~~~~~~~~a~~aEl~Pt------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll 729 (742)
T TIGR01299 657 LFGGLSIAAWNALDVLTVELYPS------DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLL 729 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence 88887777888999999999997 5689999999999999999999999888764 4566777766665555444
Q ss_pred HHH
Q 045410 229 FLI 231 (589)
Q Consensus 229 ~~~ 231 (589)
.++
T Consensus 730 ~~~ 732 (742)
T TIGR01299 730 ALK 732 (742)
T ss_pred HHh
Confidence 433
No 128
>PRK09952 shikimate transporter; Provisional
Probab=99.35 E-value=6.7e-11 Score=127.03 Aligned_cols=181 Identities=18% Similarity=0.098 Sum_probs=130.2
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+++.........++..+.+|...++++.|+.+.+|++......+.........++.++.|+++|| +||||+++.+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHH
Confidence 44444444456777788889999999999999999998877666667777788889999999999 59999999887766
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++...+....... ...+.+++..++.+++.+...+..++++.|.+|+ +.|+++.++
T Consensus 327 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~------~~r~tg~g~ 383 (438)
T PRK09952 327 TLSAFPFFMALEAQ-----------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA------SYRYSGAGV 383 (438)
T ss_pred HHHHHHHHHHHHcC-----------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc------chhHHHHhH
Confidence 55544333321000 1234444555666788888888889999999987 346677777
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhhc--chhHhHHHHHHHHHHHHHHHHH
Q 045410 187 WY-FSFTVALVVALTAVVYIQTNV--SWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 187 ~~-~~~~~g~~~~~~~~~~l~~~~--g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
.+ .+..+|+.++|.+.+++.+.. +|..++.+..+..+++.+..+.
T Consensus 384 ~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 384 GYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 44 445589999999999998754 3777777666666655555443
No 129
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.35 E-value=2.6e-11 Score=129.38 Aligned_cols=176 Identities=9% Similarity=0.048 Sum_probs=132.2
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCc--------hhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMD--------GILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.+...++..........+++.|+. +.|.+ .+..+.+.++..+...++.++.|+++|| +|||++++++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~ 290 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVA 290 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 334444444444445566777775 45544 3677999999999999999999999999 5999999999998
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..++..++......+ .+.+.+++.+++.|++.+...+....++.|.+|+ +.|++.++
T Consensus 291 ~~v~~~l~~~~~~~~-----------------~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~------~~~g~~~g 347 (418)
T TIGR00889 291 WALRFGFFAYGDPEY-----------------FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV------HIRASAQG 347 (418)
T ss_pred HHHHHHHHHHcCcch-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------HHHHHHHH
Confidence 888776666532100 1345677788999999998889999999999986 56888999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHhh------cchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 186 WWY-FSFTVALVVALTAVVYIQTN------VSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 186 ~~~-~~~~~g~~~~~~~~~~l~~~------~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
+.+ ....+|..+||.++|++.+. +||+..|.+.+++.++..+..++..+
T Consensus 348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 986 56789999999999999987 46999988877665555544444433
No 130
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.34 E-value=1.4e-10 Score=122.86 Aligned_cols=175 Identities=11% Similarity=0.068 Sum_probs=133.2
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+..+.+....++..++++++..+++.|+.+ +|++..+.+.+.+.+.++..++.++.|+++|| +|||+.++.+..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHH
Confidence 344555556666777888899999999976 89999999999999999999999999999999 5999999998877777
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
+...+.... . +...+. .++.|++.+...|.......+.++++ +.+++.+++.+
T Consensus 283 ~~~~~~~~~---~-----------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~-----~~~g~~~g~~~ 335 (393)
T PRK09705 283 GFCGFIWLP---L-----------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQP-----AIAGKLVAFMQ 335 (393)
T ss_pred HHHHHHHcc---c-----------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCH-----HHHHHHHHHHH
Confidence 766554322 0 111122 24567888888888777777777532 35778899988
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHHh
Q 045410 189 FSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
...+++..++|.+.|++.+..| |...|.+..+..++..++....
T Consensus 336 ~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 336 GIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999876 7777777666555554444443
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.34 E-value=5.5e-11 Score=122.63 Aligned_cols=172 Identities=19% Similarity=0.229 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchH-HHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFR-TLLYGSIASFL 108 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~l~~~~~~~~~ 108 (589)
..+......++..........+++.++.+.+|.++.+.+++.+...++..++.++.|+++|| +|||+ .+..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHH
Confidence 34444455666677777777888888888889999999999999999999999999999999 59999 99999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
+.+...... +.+.+++..++.|++.+...+...+++.|.+|+ +.|++.+++++
T Consensus 255 ~~~~~~~~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 307 (352)
T cd06174 255 GLLLLALAP---------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPP------EARGTASGLFN 307 (352)
T ss_pred HHHHHHHhc---------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH------HHHHHHHHHHH
Confidence 888888765 567788889999999999999999999999886 46888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 189 FSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
...++|..+++.+.+.+.+..+|+..|.+.+++.++..+..
T Consensus 308 ~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 308 TFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999999988999999998877766665543
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=4.4e-11 Score=126.89 Aligned_cols=166 Identities=17% Similarity=0.107 Sum_probs=126.6
Q ss_pred HHHHHhHhhhHHHHHHHHHHhcCCch---hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 39 TFEKLASMSLIANMTVYLRTKYNMDG---ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~---~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
+........+.+.++.|+.+..+... ...+.+.++..++..++.++.|+++|| +|||+.+..+.++..++.+...+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMSF 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHHH
Confidence 33444444556777888776544322 134556667777888899999999999 59999999998877777766665
Q ss_pred hhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHH
Q 045410 116 TASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVAL 195 (589)
Q Consensus 116 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (589)
.. +.+.+++.+++.|++.+...+...+++.+..|++ .+++.+++++...++|.
T Consensus 308 ~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~g~ 360 (408)
T PRK09874 308 VQ---------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IAGRIFSYNQSFRDIGN 360 (408)
T ss_pred hc---------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cceeeehHHHHHHHHHH
Confidence 44 4566778889999999999999999888877652 35667888888899999
Q ss_pred HHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 196 VVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 196 ~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
.+||.++|++.+.+||++.|++.+++.+++.+..+..
T Consensus 361 ~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 361 VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887777666555443
No 133
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=1.2e-10 Score=122.70 Aligned_cols=168 Identities=10% Similarity=-0.031 Sum_probs=139.9
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.|..+......++...+.+...++.++|++ ++|.++.+.|.+.++..++..+..++.|++.|| +|+|+.+.++.+...
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACV 281 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHH
Confidence 355566666777777788888889999996 489999999999999999999999999999999 599999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
+....+++++ +.+.+++..++.|+..+...+....++.+. |+ +.++++.+++
T Consensus 282 ~~~~~~~~~~---------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~------~~~~~~q~~~ 333 (382)
T TIGR00902 282 GRWAIIGAIE---------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG------SEIAKLQALY 333 (382)
T ss_pred HHHHHHHhHh---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH------hhHHHHHHHH
Confidence 9988888766 778888899999999999999999999986 65 3356677776
Q ss_pred H-HHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHH
Q 045410 188 Y-FSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSI 226 (589)
Q Consensus 188 ~-~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~ 226 (589)
+ ....+|..+++.++|++.+++|+ ..|++.+.+.++++
T Consensus 334 ~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 334 NALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 5 46679999999999999999886 56666666555444
No 134
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.32 E-value=1.4e-09 Score=111.01 Aligned_cols=345 Identities=15% Similarity=0.104 Sum_probs=190.3
Q ss_pred hHHHHHHHHHHhcCC---c----hhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHH-HHHHHHHHHHHHHhhcC
Q 045410 48 LIANMTVYLRTKYNM---D----GILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYG-SIASFLGMGIMTLTASI 119 (589)
Q Consensus 48 ~~~~l~~yl~~~lg~---s----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~-~~~~~~~~~~~~~~~s~ 119 (589)
+..++|+|+++..+- + .+-.+...++..+..++..|+-|.++|.. |+||....- .++.++....+.+..+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 446688888876543 2 34456778888889999999999999995 877666544 4445555556666541
Q ss_pred CCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHH
Q 045410 120 PKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVAL 199 (589)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 199 (589)
...++..++..++..++..+......+++.|..++++.++.++++ +....+|+.+.-
T Consensus 112 -----------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg------~~~gylgs~i~l 168 (438)
T COG2270 112 -----------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLG------WALGYLGSVILL 168 (438)
T ss_pred -----------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccc------cccccccchHHH
Confidence 125566667777888998888999999999998876544432222 223445555444
Q ss_pred HHH--HHHH----------------hhcchhHhHHHHHHHHHHHHHHHHHhhcccccc-CCCCChHHHHHHHHHHHHhcc
Q 045410 200 TAV--VYIQ----------------TNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIK-NPQGSVFVDMAKVITASCRKR 260 (589)
Q Consensus 200 ~~~--~~l~----------------~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 260 (589)
+++ +.+. +...-|..+.++++..++..+-+++..++..+. .|..+......+.....+|+-
T Consensus 169 i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i 248 (438)
T COG2270 169 IFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTFKEI 248 (438)
T ss_pred HHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHHHHH
Confidence 332 1111 112245566666665555444444443332211 122222222222222122111
Q ss_pred ccccCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHhHHHH
Q 045410 261 KVNLGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVAMFPV 340 (589)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 340 (589)
+.. ++....+
T Consensus 249 ~~~-----------------------------------------------------------------~~i~~FL----- 258 (438)
T COG2270 249 RGR-----------------------------------------------------------------KNLVLFL----- 258 (438)
T ss_pred hcc-----------------------------------------------------------------cchHHHH-----
Confidence 100 0111111
Q ss_pred HHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHH
Q 045410 341 WITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITI 420 (589)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~ 420 (589)
+-........++....-...-....+..+.....+.....+...++..+.+ ++.+|++.|+ .+..
T Consensus 259 ----iA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g----~Ld~rfg~k~-------vl~~ 323 (438)
T COG2270 259 ----IARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAG----FLDERFGSKP-------VLMI 323 (438)
T ss_pred ----HHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhCCce-------eehH
Confidence 111111222222221111100001110001111222222333333333433 3477776553 6677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHH
Q 045410 421 GILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSL 500 (589)
Q Consensus 421 g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 500 (589)
++++..+.++...+.. . .. ..+..-++.++..+-.....-++..+.+|++..+...|++++..
T Consensus 324 ~lvi~~~~~~~~~~~~---------------~-~~-~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltg 386 (438)
T COG2270 324 GLVILSIAALYLIFLE---------------G-EL-DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTG 386 (438)
T ss_pred HHHHHHHHHHHHHHcc---------------c-cH-HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhh
Confidence 7777776666555442 1 11 22333466777777777777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccc
Q 045410 501 SISSYINSALVNIIHGLTK 519 (589)
Q Consensus 501 ~lg~~l~~~l~~~i~~~~~ 519 (589)
..++++||++.+.+.+.++
T Consensus 387 ra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 387 RAASFLGPFLVAVITQITG 405 (438)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987663
No 135
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.6e-11 Score=123.26 Aligned_cols=180 Identities=13% Similarity=0.036 Sum_probs=139.2
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcc-cchHHHHHHHH-H
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYL-GRFRTLLYGSI-A 105 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~l~~~~~-~ 105 (589)
.|.+|++....++.+..-|++..|.|.|+.|..|+|..++++..+.|-.+...++++.||++||++ |||...-+.+. +
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 566788889999999999999999999999999999999999999999999999999999999998 77765544433 3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..++...+.+++ ..+..+..+..+..|+...+..-.+.....|..|++. -+++.+
T Consensus 331 i~~~~~~~w~~~-------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~G 385 (448)
T COG2271 331 ITASLVLYWLAP-------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATG 385 (448)
T ss_pred HHHHHHHHHcCC-------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhc
Confidence 333444444433 1256777777788888777766666667778887643 445666
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 186 WWYFSFTV-ALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 186 ~~~~~~~~-g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
....+..+ |+..+....+++.|.+||...|.+..+..+++.+.+...
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 66667777 888888888999898999999988666666555554443
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=2.1e-10 Score=121.15 Aligned_cols=172 Identities=6% Similarity=-0.060 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+......++.....++...++++|+.+.+|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+ .+..+..++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~ 285 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLL 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHH
Confidence 3344445555566666677888899888999999999999999999999999999999994 987654 44444444433
Q ss_pred HH-HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH
Q 045410 112 IM-TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS 190 (589)
Q Consensus 112 ~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (589)
.. .... +.+.+++..++.|++.+...+...+.+.+..|+ .|++++++++..
T Consensus 286 ~l~~~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~ 337 (390)
T PRK03545 286 LLLPAAN---------------------SEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-------ATDVAMALFSGI 337 (390)
T ss_pred HHHHHhc---------------------hHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-------cHHHHHHHHHHH
Confidence 33 2222 456677778888998888777778888886653 356678888888
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhh
Q 045410 191 FTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGY 233 (589)
Q Consensus 191 ~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (589)
.++|..+||.++|++.+++|++..|++.+.+.+++.+......
T Consensus 338 ~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 338 FNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999988877777666655443
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.30 E-value=7.2e-11 Score=125.36 Aligned_cols=167 Identities=8% Similarity=-0.080 Sum_probs=127.1
Q ss_pred HHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHH
Q 045410 35 LGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMT 114 (589)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~ 114 (589)
....++....++.+..+++.|+. +.|++..+.+.+.+.+.++..++.++.|+++|| +|||+.+..+.+...++.+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 226 WISYFFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALA 303 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHH
Confidence 33445555666777788888886 479999999999999999999999999999999 5999999887766666655555
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHH
Q 045410 115 LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVA 194 (589)
Q Consensus 115 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (589)
+.. +.+.+.+..++.|++.+...+...++..|.+|+ +.|++.+++.+....+|
T Consensus 304 ~~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~~~~~g 356 (406)
T PRK11551 304 AAP---------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPT------QVRGTGVGAAVAVGRLG 356 (406)
T ss_pred hcC---------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcch------hhhhhhhhHHHHhhhHH
Confidence 433 344455666777888777888889999999987 34778899999999999
Q ss_pred HHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHH
Q 045410 195 LVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~ 230 (589)
..++|.+.|++.+..+ |...+++.....+++.+..+
T Consensus 357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988654 55555554444444444333
No 138
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=1.2e-10 Score=123.17 Aligned_cols=161 Identities=14% Similarity=0.117 Sum_probs=128.6
Q ss_pred HHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhc
Q 045410 39 TFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTAS 118 (589)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s 118 (589)
++....+..+..+++.|+.+ .|++. .+.....+.++..+++++.|++.|| +||||.+..+.++..++.++..+..
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcc-
Confidence 34445556666777888764 56553 5566677777888999999999999 5999999999888888877766644
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 045410 119 IPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVA 198 (589)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 198 (589)
+.+..+++.++.|++.+...+...+.+.|.+|+ +.|++.+++++...++|..++
T Consensus 301 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 301 --------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS------QVRGTALGGYAAFQDIAYGVS 354 (392)
T ss_pred --------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHH
Confidence 455677788899999988888888888888875 458889999999999999999
Q ss_pred HHHHHHHHhhcchhHhHHHHHHHHHHHHHHHH
Q 045410 199 LTAVVYIQTNVSWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 199 ~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (589)
|.+.+++.++.||+..|.+.+.+.+++.++.+
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987776666655544
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.29 E-value=1.3e-10 Score=121.78 Aligned_cols=176 Identities=13% Similarity=0.046 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHH-HHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLL-YGSIASF 107 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~-~~~~~~~ 107 (589)
|..+......++.....+.+..+++.|+.+.+|.+..+.+++.+...+...++.+++|+++|| +|||+..+ .......
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHH
Confidence 455666677778888888888999999999999999999999999999999999999999999 49996211 1111111
Q ss_pred HH---HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 108 LG---MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 108 ~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
++ .....+..... .+.+..+....+.+.+.+ ..+...+++.|.+|+ +.|++.+
T Consensus 294 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~g~~~ 349 (399)
T TIGR00893 294 IAGLVLSLLMFATNYV-----------------NIPYAALALVALGFFGLG-AGAIGWALISDNAPG------NIAGLTG 349 (399)
T ss_pred HHHHHHHHHHHHhccc-----------------hhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh------hHHHHHH
Confidence 11 11111111000 122333333333444444 788999999999986 4578899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~ 229 (589)
++++...++|..++|.+.+++.+..| |+..|.+.++..+++.+..
T Consensus 350 ~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 350 GLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888 9988887776665555443
No 140
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.29 E-value=5.6e-11 Score=126.94 Aligned_cols=161 Identities=9% Similarity=0.008 Sum_probs=125.4
Q ss_pred HhHhhhHHHHHHHHHHhc---CCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcC
Q 045410 43 LASMSLIANMTVYLRTKY---NMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASI 119 (589)
Q Consensus 43 ~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~ 119 (589)
..+......++.|+.+.+ +.+..+.+.+.++..+...++.+++|+++|| +|||+.+..+.++..++.+++.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~~~-- 313 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGFAT-- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHhcc--
Confidence 333334445677766543 6677888999999999999999999999999 5999999999998888888877765
Q ss_pred CCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH-HHHHHHHHHHHH
Q 045410 120 PKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW-WYFSFTVALVVA 198 (589)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~~ 198 (589)
+++.+++.+++.+++.+...+....++.|.+|++ .+++..+. ++...++|.+++
T Consensus 314 -------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~~lg~~ig 368 (420)
T PRK09528 314 -------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR------LSATIYLVGFQFAKQLGAVFL 368 (420)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------ceeeeeeehHHHHHHHHHHHH
Confidence 5677888889999988887778888889988763 24444444 566788999999
Q ss_pred HHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 199 LTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 199 ~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+.+.|++.+..||+..|.+.+++.++..++.+.
T Consensus 369 ~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 369 STLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876665555444433
No 141
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.27 E-value=2.9e-11 Score=107.09 Aligned_cols=132 Identities=14% Similarity=0.162 Sum_probs=110.5
Q ss_pred HHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 045410 72 SIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLA 151 (589)
Q Consensus 72 ~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 151 (589)
+.+.++..++.++.|+++|| +|||+.+..+.++..++.+.+.... +.+.+.+.+++.|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~g 62 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSS---------------------NITVLIIARFLQG 62 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhc---------------------cHHHHHHHHHHHH
Confidence 34567788899999999999 5999999999988888888777755 5677888899999
Q ss_pred HhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 152 IGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 152 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
++.+...+...+++.|.+|+ +.|++..++.+...++|..+++.+.+.+.+..+|++.|++.....++..+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPP------EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHhHHHHHHHHCCh------hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999986 347778999999999999999999999998889999888876665555444433
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.26 E-value=4.5e-10 Score=118.31 Aligned_cols=154 Identities=19% Similarity=0.234 Sum_probs=118.4
Q ss_pred HHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCC
Q 045410 42 KLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPK 121 (589)
Q Consensus 42 ~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~ 121 (589)
.+.+....++++.|+++ .|.++.+.+.+.+...++..+++++.|+++||+ |||+++..+..+..++..... ..
T Consensus 213 ~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~---- 285 (381)
T PRK03633 213 GIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ---- 285 (381)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh----
Confidence 33444455678888864 699999999999999999999999999999995 999999988877777654432 11
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 045410 122 LRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTA 201 (589)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 201 (589)
...+..+++.|++.+...|...+.+.|..|++ .+....+.++...++|..+||.+
T Consensus 286 -------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~igp~~ 340 (381)
T PRK03633 286 -------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHH------ELVAMNQALLLSYTVGSLLGPSF 340 (381)
T ss_pred -------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 11334566777777777899999888988752 24455666677889999999999
Q ss_pred HHHHHhhcchhHhHHHHHHHHHHHHH
Q 045410 202 VVYIQTNVSWILGFAIPTGCFFLSIV 227 (589)
Q Consensus 202 ~~~l~~~~g~~~~f~~~~~~~~i~~~ 227 (589)
+|++.++++|++.|.+.+.+.++..+
T Consensus 341 ~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 341 TAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 99999999999999887666655543
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.25 E-value=2.5e-10 Score=123.17 Aligned_cols=176 Identities=11% Similarity=0.020 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhccc--chHHH-HHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLG--RFRTL-LYGSIA 105 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~l-~~~~~~ 105 (589)
+.++...+..++.....|++..++|.|+++..|++..+.+.+...+.++..++.+++|+++|| ++ ||+.. +....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHH
Confidence 445666667777777778889999999999899999999999999999999999999999999 54 44432 222233
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..++.+.+.+.. . .+.+..+++.++.|.+..........+..|.+|+ +.|++.++
T Consensus 332 ~~~~~~~~~~~~--~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~~g~~~g 386 (452)
T PRK11273 332 VTIATIVYWLNP--A-----------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK------KAAGTAAG 386 (452)
T ss_pred HHHHHHHHHHhc--c-----------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh------hhhhhHHH
Confidence 333333332221 0 0223334444444544332222334456788886 45778899
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHH
Q 045410 186 WWYFSFTVALVV-ALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 186 ~~~~~~~~g~~~-~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (589)
+.+...++|+.+ +|.+.|++.+.+||+..|++.....+++++...
T Consensus 387 ~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 387 FTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 888888887654 799999999999999999887766665554443
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.24 E-value=2.9e-10 Score=124.05 Aligned_cols=148 Identities=19% Similarity=0.114 Sum_probs=113.9
Q ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 045410 47 SLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPD 126 (589)
Q Consensus 47 ~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~ 126 (589)
.+..+++.|+++++|++..+.+++.+...++..++.+++|+++|| +|||+++..+.++..++.+......
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 456789999988999999999999999999999999999999999 5999999888766655544433322
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 127 CTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQ 206 (589)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 206 (589)
..+.+...+..++.+.......+..++++.|.+|+ +.|++.+++++...++|..+||.+.|.+.
T Consensus 363 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~g~~lgp~l~g~l~ 426 (496)
T PRK03893 363 ----------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT------EQRAAGLGFTYNVGALGGALAPILGALIA 426 (496)
T ss_pred ----------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH------HHhhcccchhhhhhhHHHHHHHHHHHHHh
Confidence 01333344444444433334456778888998886 45778899988889999999999999999
Q ss_pred hhcchhHhHHHHHH
Q 045410 207 TNVSWILGFAIPTG 220 (589)
Q Consensus 207 ~~~g~~~~f~~~~~ 220 (589)
+.+||+..+.+...
T Consensus 427 ~~~g~~~~~~~~~~ 440 (496)
T PRK03893 427 QRLDLGTALASLSF 440 (496)
T ss_pred ccCChHHHHHHHHH
Confidence 99999887755443
No 145
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.24 E-value=4e-10 Score=120.22 Aligned_cols=159 Identities=12% Similarity=0.072 Sum_probs=128.7
Q ss_pred HhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 045410 45 SMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRP 124 (589)
Q Consensus 45 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~ 124 (589)
.+++..+++.|+.+.+|.+..+.+++.+...++..++.++.|+++||. ++++.+..+.++..++.+++.+.+
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 356677888999888999999999999999999999999999999994 888888888887777776665544
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 125 PDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVY 204 (589)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 204 (589)
+.+...++.++.|++.+...+...+++.|.+|+ +.|++.+++++...++|..+|+.+.|+
T Consensus 311 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~~~~~g~~~g~~l~G~ 370 (417)
T PRK10489 311 --------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD------EMLGRINGLWTAQNVTGDAIGAALLGG 370 (417)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH------HHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 455667777888888887777778888998886 468889999999999999999999999
Q ss_pred HHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 205 IQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 205 l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+.+.+|++..+...++..++..++...
T Consensus 371 l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 371 LGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 999989887777655544443333333
No 146
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=6.4e-10 Score=114.44 Aligned_cols=180 Identities=12% Similarity=0.037 Sum_probs=145.4
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
-+.++++..+.++++...+.|...+++.+++++..|++.+..+++...|.++..++.+++|+++|| +.|+++.....+
T Consensus 208 l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l 285 (394)
T COG2814 208 LRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLL 285 (394)
T ss_pred hcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHH
Confidence 345567778889999999999999999999999999999999999999999999999999999999 799999988888
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
..+..+.+.+.. .+.+...+..++.|++..........-+++..|+ .+....+
T Consensus 286 ~a~~~l~l~~~~--------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~-------~~~~a~s 338 (394)
T COG2814 286 LALALLALTFTG--------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPD-------AADLAGS 338 (394)
T ss_pred HHHHHHHHHHhc--------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC-------chHHHHH
Confidence 888777777654 1455566666666777665544445545553332 2446778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
++....|+|..+|..++|.+.+++|+....++++.+.+++++..+...+
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888899999999999999999999999999999888888777665544
No 147
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.24 E-value=4.4e-10 Score=120.57 Aligned_cols=178 Identities=11% Similarity=-0.006 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcc-cchHHH-HHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYL-GRFRTL-LYGSIASF 107 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~l-~~~~~~~~ 107 (589)
.++.+....++....++++.++++.|+.+++|++..+.+...+.+.++..++.+++|+++||+. ++|+.. ....+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 3455555566666777788889999998889999999999999999999999999999999941 223332 22222222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
+....+.... . .+.....+..++.|++.............|.+|+ +.|++..++.
T Consensus 324 ~~~~~~~~~~---~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~ 378 (434)
T PRK11663 324 LSVGSLWLMP---F----------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK------EAAGAATGFV 378 (434)
T ss_pred HHHHHHHHcc---c----------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH------hhHHhHHHHH
Confidence 2221111111 0 0222233333334443222222334556787765 4588899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
+...++|..++|.+.+++.+.+||+..|++.+++.+++.+..+..
T Consensus 379 ~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 379 GLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988777766655544433
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.23 E-value=2.6e-10 Score=120.55 Aligned_cols=154 Identities=17% Similarity=0.125 Sum_probs=120.2
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHH-HH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGI-MT 114 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~-~~ 114 (589)
...++.....++...+++.|+.+++|++..+.+++.+...++..++.++.|+++|| +|||+.+..+.++..+.... ..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~ 323 (405)
T TIGR00891 245 VLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFA 323 (405)
T ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHH
Confidence 33344444555667788999999999999999999999999999999999999999 59999998887765333222 22
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHH
Q 045410 115 LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVA 194 (589)
Q Consensus 115 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 194 (589)
... +.+.+.++.++.++..+...+..++++.|.+|+ +.|++.+++.+...++|
T Consensus 324 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~g 376 (405)
T TIGR00891 324 IGA---------------------NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT------DQRAAGLGFTYQLGNLG 376 (405)
T ss_pred hCC---------------------chHHHHHHHHHHHHHHccchhhHHHHHhhhCCc------chhHHHhhHHHHHHHHH
Confidence 211 344555666677777777778888999999986 35778899988999999
Q ss_pred HHHHHHHHHHHHhhcc-hhHhHHH
Q 045410 195 LVVALTAVVYIQTNVS-WILGFAI 217 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g-~~~~f~~ 217 (589)
..++|.+.|++.+..| |+..+..
T Consensus 377 ~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 377 GALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999888 7765544
No 149
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.23 E-value=2.3e-10 Score=123.43 Aligned_cols=171 Identities=11% Similarity=0.039 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc-ccchHHHHHHHH--HH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY-LGRFRTLLYGSI--AS 106 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~l~~~~~--~~ 106 (589)
..+..+...++..++++...++++.|+. ++|++..+.+.+.++..++..++.+++|+++||+ +++|+...++.. +.
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 4455555667777787888889999986 5799999999999999999999999999999983 234444444332 22
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++.+++.+.. +.+.+++.+++.|++.+...++..+++.|.+|+ +.+++.+++
T Consensus 321 ~l~~ll~~~~~---------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~------~~~g~~~g~ 373 (455)
T TIGR00892 321 GLTHLLCALAG---------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA------QRFSSAVGL 373 (455)
T ss_pred HHHHHHHHHhc---------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH------HHHhhHHhH
Confidence 33333333333 566778889999999999999999999999886 457788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-chhHhHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNV-SWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~-g~~~~f~~~~~~~~i~~~~ 228 (589)
++...++|..+||.++|++.+.. +|++.|++.+++.+++.+.
T Consensus 374 ~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 374 VTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 99999999999999999999877 4999998877766555443
No 150
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.23 E-value=7.4e-09 Score=105.75 Aligned_cols=80 Identities=10% Similarity=-0.057 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN---------- 208 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------- 208 (589)
++..++++.++.|.|.+...+..+++++++.+++ ++++.+++......+|.+++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~------~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIE------TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc------hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 6788999999999999999999999999998763 355668888889999999999999987732
Q ss_pred ------cchhHhHHHHHHHHHH
Q 045410 209 ------VSWILGFAIPTGCFFL 224 (589)
Q Consensus 209 ------~g~~~~f~~~~~~~~i 224 (589)
.+|+++|++.+.+..+
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~ 104 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAV 104 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 4688898855544333
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.22 E-value=9e-10 Score=116.94 Aligned_cols=177 Identities=10% Similarity=0.023 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHH-HHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLL-YGSIASF 107 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~-~~~~~~~ 107 (589)
|.++......++...++++..+++|.|++ ++|++..+.+.+.+...++..++.++.|+++|| +|||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHH
Confidence 34455556677777888899999998885 589999999999999999999999999999999 59998764 3333334
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
++...+.+..... ..+.+..++..++.|++.+...+. .+.+.|..| +.|++.+++.
T Consensus 300 ~~~~~l~~~~~~~----------------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-------~~~g~~~g~~ 355 (402)
T TIGR00897 300 IFTLALYYIPQHF----------------GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-------KHKGAAMSVL 355 (402)
T ss_pred HHHHHHHHHHHcc----------------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-------chhHHHHHHH
Confidence 4333333221000 013455666777788887766543 455666543 2377889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+...++|..++|.+.+.+.+..||...|++.+++.+++.+...+
T Consensus 356 ~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 356 NLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888877666655544433
No 152
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.22 E-value=4.1e-10 Score=114.70 Aligned_cols=187 Identities=12% Similarity=0.018 Sum_probs=140.5
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+.|.+|.+....+..--++-++..+++.|+.+++|.++.+++.+...+.+...+..+.+|+|+|| +|.+|+.....+.+
T Consensus 216 ~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~ 294 (417)
T COG2223 216 SNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGM 294 (417)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHH
Confidence 45667777778888877888889999999999999999999999999999999999999999999 59999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
+++..+..+..+... +..+...+++..+.+++..|.-......++...||+ +-+...++
T Consensus 295 ~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-------~~G~v~G~ 353 (417)
T COG2223 295 ALAAALLSLFLTGFG--------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-------ETGAVTGI 353 (417)
T ss_pred HHHHHHHHccccccc--------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-------hhhHHHHH
Confidence 888888777431111 011333344433344444444444556666666764 24456777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHHhhcc
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLIGYHT 235 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (589)
.....++|++.-|...+...+..| +...|++-..+.+++.+.....+.+
T Consensus 354 vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 354 VGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888889999888988899888887 8888888777777676665555443
No 153
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.21 E-value=8.1e-10 Score=112.85 Aligned_cols=164 Identities=12% Similarity=0.026 Sum_probs=124.3
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHh--cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTK--YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+.|..+......|+.-..--++..+++.|+.+. +|+++.+.+...+.+..+..++.+++++++|| +|+||.+.++.+
T Consensus 138 ~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~ 216 (310)
T TIGR01272 138 QFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAF 216 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHH
Confidence 344555544555555445667788999999854 79999999999999999999999999999999 599999988888
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+..++.++..... +.. ...+.++.|++.+.++|...+...+.+|++. ++++
T Consensus 217 l~~~~~~l~~~~~---------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-----~~as-- 267 (310)
T TIGR01272 217 LAVLLSIGAALTH---------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-----SQGS-- 267 (310)
T ss_pred HHHHHHHHHHHcC---------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hhhH--
Confidence 7777765554432 111 2235557899999999999999999887531 2223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGC 221 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~ 221 (589)
++. ....+|+.+.|.+.|.+.|..|.+.+|++...+
T Consensus 268 ai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 268 GIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 333 466789999999999999999988888765543
No 154
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.20 E-value=1.4e-09 Score=116.99 Aligned_cols=184 Identities=14% Similarity=0.084 Sum_probs=147.6
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccch--HHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRF--RTLLYGSIA 105 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~l~~~~~~ 105 (589)
.|.+..-++.-++..-+..++.+....|..+.+|++..+...+..+..+...++.++.|++.|| +|.| ++++.++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHH
Confidence 4455555566677777888888999999999999999999999999999999999999999999 5999 999988887
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
+.+..+.-.+.. .+... ...+.+.+++.-++.|+..|...+..-++.+++.|+++ .+..|+
T Consensus 359 ~~~i~~~g~~G~-~~~~~------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFg 419 (477)
T PF11700_consen 359 WIIIPLYGLFGF-WPSFF------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFG 419 (477)
T ss_pred HHHHHHHHHHHh-hhccc------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHH
Confidence 755444433311 01000 01256778888889999999999999999999999843 467899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+|.......+++||++.+.+.+..| .|..+....++.++++++++.
T Consensus 420 ly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 420 LYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999886 888887777776666666544
No 155
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.19 E-value=1.3e-09 Score=117.01 Aligned_cols=169 Identities=12% Similarity=-0.039 Sum_probs=109.4
Q ss_pred HHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH-
Q 045410 37 NETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL- 115 (589)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~- 115 (589)
..++....+|++.++++.|+.+.+|++..+.+...++......++.++.|+++|| +|||+.++++.++..+.......
T Consensus 251 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 251 FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHH
Confidence 3344467788999999999999999999999999988888888999999999999 59999888776654433322221
Q ss_pred hhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH-H
Q 045410 116 TASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV-A 194 (589)
Q Consensus 116 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g 194 (589)
....+ +....+....+..++.+...+....+..|.+|+ +.|++++++.+...++ +
T Consensus 330 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~------~~r~t~~g~~~~~g~~~~ 385 (432)
T PRK10406 330 LQNVS------------------SPYAAFGLVMCALLIVSFYTSISGILKAEMFPA------QVRALGVGLSYAVANALF 385 (432)
T ss_pred HHcCC------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CccchhhhHHHHHHHHHH
Confidence 11000 122222222222233333445677888999997 4577888887665443 3
Q ss_pred HHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHH
Q 045410 195 LVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+...|.+.+++. ..| |...+++.++..+++.+..++
T Consensus 386 g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 386 GGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 445777777664 455 555555555555555444443
No 156
>PRK15075 citrate-proton symporter; Provisional
Probab=99.19 E-value=1e-09 Score=117.70 Aligned_cols=153 Identities=12% Similarity=0.034 Sum_probs=108.2
Q ss_pred HHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH-HH
Q 045410 35 LGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG-IM 113 (589)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~-~~ 113 (589)
....++....++.+..++|.|+++.+|++..+.+++...+.++..++.+++|+++|| +|||++++.+.++..+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHH
Confidence 344455667778888999999998899999999999888889999999999999999 5999998877554433221 11
Q ss_pred HHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHH-
Q 045410 114 TLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFT- 192 (589)
Q Consensus 114 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~- 192 (589)
......+ +........++.+++.+...+....++.|.+|++ .|++++++.+...+
T Consensus 323 ~~~~~~~------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~------~rg~~~g~~~~~~~~ 378 (434)
T PRK15075 323 SWLVAAP------------------SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE------VRTAGFSLAYSLATA 378 (434)
T ss_pred HHHHcCC------------------chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC------ccchheeHHHHHHHH
Confidence 1111001 2222334445556666666777778899999873 46667777444333
Q ss_pred HHHHHHHHHHHHHHhhcchh
Q 045410 193 VALVVALTAVVYIQTNVSWI 212 (589)
Q Consensus 193 ~g~~~~~~~~~~l~~~~g~~ 212 (589)
+++.++|.+.+++.+..|++
T Consensus 379 ~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 379 IFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHhhhHHHHHHHHHHhcCCc
Confidence 45778999999999988854
No 157
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.19 E-value=1.6e-09 Score=117.98 Aligned_cols=176 Identities=15% Similarity=0.049 Sum_probs=124.6
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHH-HHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVS-IWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGI 112 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~ 112 (589)
+....++.....+....+.++|+.+.+|++..+.+.+.. ...++..++.+++|+++|| +||||.++++.++..+..+.
T Consensus 227 ~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~ 305 (491)
T PRK11010 227 ILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAG 305 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 333345555666666778888988889999999999975 5567999999999999999 59999888776655554433
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHH
Q 045410 113 MTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFT 192 (589)
Q Consensus 113 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 192 (589)
+......+ .+.+.+.+..++..+..|...+...++..+..+++ ..++.+++.+...+
T Consensus 306 ~~~l~~~~-----------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~------~~~t~~gl~~s~~~ 362 (491)
T PRK11010 306 YWLLSITD-----------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKS------FSATQFALLSALSA 362 (491)
T ss_pred HHHHHhcc-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------CcHHHHHHHHHHHH
Confidence 32211001 13333444455555555555566678888887763 24556888888889
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhh
Q 045410 193 VALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGY 233 (589)
Q Consensus 193 ~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (589)
+|..+++.+.|++.+..||+..|.+..++.+++++.....+
T Consensus 363 lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 363 VGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888999999999999998887777777766655543
No 158
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.19 E-value=8.9e-09 Score=109.68 Aligned_cols=356 Identities=16% Similarity=0.160 Sum_probs=205.8
Q ss_pred HHHHHHHHHHhHhhhH---HHHHHHHHHhcCCc-hhHHHHHHHHH----HHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLI---ANMTVYLRTKYNMD-GILLVNVVSIW----GGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s-~~~~~~~~~~~----~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
+....++..++++... .....+.....+.+ ..+.+...... .+...+.++.-|.++||+ |||..+......
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHH
Confidence 3344555555544444 55566665555543 22333333333 578889999999999996 999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH--HhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLA--IGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g--~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
..+..+...+.. +++++ +.+ -+.+...+...++++|...+ +.|...
T Consensus 102 ~~l~~~~~~~~~-----------------------~~~~~---~~~l~g~~~~~~s~~~a~vadis~~------~~R~~~ 149 (463)
T KOG2816|consen 102 TILPALCLLFQG-----------------------YWFFL---LLGLSGGFSAIFSVGFAYVADISSE------EERSSS 149 (463)
T ss_pred HHHhHHHHHHHH-----------------------HHHhh---hcccccchhhhhhhhhhheeeccch------hHHHHH
Confidence 888888887743 33333 222 23344566777888887654 468888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccc
Q 045410 184 FNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVN 263 (589)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (589)
+++.+.....+..++|.+++.+.+..|.-..|.++.+..++.........|+...++.+..
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~------------------- 210 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD------------------- 210 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-------------------
Confidence 9998888888999999999999999999899999888877776665555444221111100
Q ss_pred cCCCCCCCccCCCCCccccccccccCCCCcchhhhhhhhhhhcCCccccCCCCCCCcccchhhhHHHHHHHHh-HHHHHH
Q 045410 264 LGQASGNSLYDPPLTQSETESKTTKLPHTNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCSLLQVEQLKLLVA-MFPVWI 342 (589)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~ 342 (589)
......+..... +....+..+.. .+ ....|..+. ++..+.
T Consensus 211 ---~~~~~~~~~~~~------------~~~~~~~~~~~----------------------~~--~~~~r~~l~l~l~~~~ 251 (463)
T KOG2816|consen 211 ---ATLRELTPGSLD------------SSHVADAFQSL----------------------TK--VGPDRLLLLLLLVAFL 251 (463)
T ss_pred ---ccccccCCCccc------------chhhhhhhhhh----------------------cc--cCCCccchHHHHHHHH
Confidence 000001111000 00000000000 00 000111111 111111
Q ss_pred HHHHHHHhhhcchhhHHhhhhhcccccCcccc-ccc----ccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHH
Q 045410 343 TGIFCFLAMDQQNTIGILQAIQTNKRFGSFNV-PPG----WMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQR 417 (589)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~ 417 (589)
.... -..+..... ....+... +|+. ..+ ....+..+..++..++. .+.++.| +.
T Consensus 252 ~~~~---~~~~~~~~~---~~yl~~~f-~w~~~~~s~~~~~~~~~~~i~~l~~~~~l-------~~~l~~~-------~~ 310 (463)
T KOG2816|consen 252 SSLP---EAGGASDVL---LLYLKAKF-GWNKKEFSDLLSLVSILGIISQLLLLPLL-------SSILGEK-------RL 310 (463)
T ss_pred HHHH---HhcCceeEE---EEEEeeec-CcCHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhhh-------hH
Confidence 1111 111001000 00111111 1111 111 12233333444443332 4444433 27
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHH
Q 045410 418 ITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFF 497 (589)
Q Consensus 418 i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 497 (589)
+..|+..-.+..+++++.+ .. |................|...+++..+..++.+|++.++..
T Consensus 311 i~lGl~~~~~~~~~~af~~-----------------~~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is 372 (463)
T KOG2816|consen 311 ISLGLLSEFLQLLLFAFAT-----------------ET-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIIS 372 (463)
T ss_pred hhHHHHHHHHHHHHHHHhc-----------------cc-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHH
Confidence 8899999999999999875 22 33334445555666788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q 045410 498 LSLSISSYINSALVNIIHGLTK 519 (589)
Q Consensus 498 ~~~~lg~~l~~~l~~~i~~~~~ 519 (589)
....+++.+++.+.+.+...+.
T Consensus 373 ~i~~l~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 373 GIEGLSGVVSPALYGNIFALTL 394 (463)
T ss_pred HHHHHhhhhhHHHHHHHHHHHH
Confidence 9999999999999988765543
No 159
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.17 E-value=2.1e-09 Score=113.32 Aligned_cols=166 Identities=10% Similarity=-0.004 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
|..+......++....++...+.++.|+. +.|.+..+.+.+.+...++..+..++.|++.|| +|+|+.+..+.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHH
Confidence 34455555566666666677788888985 589999999999999989999999999999999 5999999999988888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
+.+.+...+ +++.+++..++.|++.+...+....++.+. +++ .+++..+.++
T Consensus 283 ~~~~~~~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~ 334 (382)
T PRK11128 283 RWGLMGSTT---------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGS------EVIRLQALYS 334 (382)
T ss_pred HHHHHHhhh---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHh------hhHHHHHHHH
Confidence 777666654 677788889999999998888888887775 332 2345666654
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHH
Q 045410 189 -FSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 189 -~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~ 225 (589)
....+|..+||.++|.+.|.+|+. .|+..+++.+++
T Consensus 335 ~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 335 ALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 455678889999999999988874 555555544433
No 160
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.16 E-value=1.4e-09 Score=117.32 Aligned_cols=167 Identities=13% Similarity=-0.004 Sum_probs=117.0
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045410 49 IANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCT 128 (589)
Q Consensus 49 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 128 (589)
..+..+++.+++|++..+.++......++..++.+++|+++|| +|||+.+.++.++..++.+++.+...... .+
T Consensus 303 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--- 376 (481)
T TIGR00879 303 IMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFV--TG--- 376 (481)
T ss_pred hHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhccc--CC---
Confidence 3444455556789999999999999999999999999999999 59999999998888887777763220000 00
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 129 GAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN 208 (589)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 208 (589)
.....+...+....++.+.......+....++.|.+|+ +.|++..++.+...++|.+++|.+.+.+.++
T Consensus 377 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 377 -----SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPL------SLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred -----cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCCh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000112222222222222233457777888999986 4578889999999999999999999999998
Q ss_pred cchhHhHHHHHHHHHHHHHHHHHh
Q 045410 209 VSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 209 ~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
.+|++.|++.+++.+++.++.++.
T Consensus 446 ~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 446 IGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred cCccceehhHHHHHHHHHHHHhee
Confidence 899998888776665555554443
No 161
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.14 E-value=1.6e-08 Score=108.01 Aligned_cols=163 Identities=14% Similarity=0.062 Sum_probs=113.5
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc--cc--chHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY--LG--RFRTLLYGSIASFLGMGIMTLTASIPKLRPP 125 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--rr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~ 125 (589)
.....|+.+++|+++++.....+...+ -...-++.|.++|.+ +| ||+-++++.++.+++...++......
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~----- 83 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE----- 83 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-----
Confidence 446678899999999998876665443 345678899999996 23 44444556666555555555533111
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 126 DCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYI 205 (589)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 205 (589)
.+.....+..++..+|......+.=+++.|....+. ..++..-+..+....+|.+++..+.|.+
T Consensus 84 ------------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p----~~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 84 ------------SSAAIAVVLLFLASFGYAFADVAADALVVELARREP----ESRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred ------------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC----chhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 133445555667788888888888888899775432 2266677888888999999999999999
Q ss_pred HhhcchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 206 QTNVSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 206 ~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
.+..+++..|.+...+..+..+..++..+
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999998877666555544444433
No 162
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.11 E-value=1.5e-09 Score=114.94 Aligned_cols=169 Identities=9% Similarity=0.021 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhc---CCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKY---NMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+..+...+.....+.....+++.|+.+.+ +.+....+.+.++..+...++.++.|++.|| +|||+.++++.++..+
T Consensus 218 ~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 218 WMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHH
Confidence 33333344444444445556778877655 5667778888998888999999999999999 5999999999988888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH-H
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW-W 187 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~ 187 (589)
+......+. +.+.+++.+++.|++..........+..+..++ +.+++..+. +
T Consensus 297 ~~~~~~~~~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~at~~~~~~ 349 (396)
T TIGR00882 297 RIIGSSFAT---------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDV------RLSATIYLIGF 349 (396)
T ss_pred HHHHHHhcC---------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------ceEEEeehHHH
Confidence 777666644 556677788888888766555555566665553 234444544 5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~ 228 (589)
+....+|..+++.++|++.+..||+..|.+.+++.++..++
T Consensus 350 ~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 350 QFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999877765555443
No 163
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.09 E-value=1.5e-08 Score=111.08 Aligned_cols=201 Identities=13% Similarity=0.144 Sum_probs=148.6
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
....+.+..++....+.-..+.+......+-+.+.++++.++.|++.+.+-++..+...+..+.+-|. =|-|.+-+|.+
T Consensus 92 ~~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~ 170 (735)
T KOG3626|consen 92 FANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLV 170 (735)
T ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-Cccceeeechh
Confidence 44556666666544444444457788888889999999999999999999999999999999999994 78899999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCC------------CC------------------C-CCC---CCCchhHH-HHHHHHHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDC------------TG------------------A-QCP---QPEGWQLS-ILYAGLAL 149 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~------------~~------------------~-~~~---~~~~~~~~-~~~~~~~l 149 (589)
++++|++++++- ++..+-| +. . ... ..+...++ +++++.++
T Consensus 171 ~m~lgsll~alP----Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l 246 (735)
T KOG3626|consen 171 LMGLGSLLFALP----HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLL 246 (735)
T ss_pred HHHHHHHHHhCh----HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHH
Confidence 999999998762 2111111 00 0 011 11222234 78888999
Q ss_pred HHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh------------------cc-
Q 045410 150 LAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN------------------VS- 210 (589)
Q Consensus 150 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------------------~g- 210 (589)
.|+|...+.+.-.+|+=|...+. .-...+++.+....+|.++|.++++++... .|
T Consensus 247 ~GIG~Tpi~tlGisYiDDnvk~~------~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGA 320 (735)
T KOG3626|consen 247 LGIGATPIFTLGISYIDDNVKKK------NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGA 320 (735)
T ss_pred hhcCCCCCccCCCcccccccccc------CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhH
Confidence 99999999999999988866542 233567888888999999999999887632 23
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhccc
Q 045410 211 WILGFAIPTGCFFLSIVVFLIGYHTY 236 (589)
Q Consensus 211 ~~~~f~~~~~~~~i~~~~~~~~~~~~ 236 (589)
||..|++++.+.++..+.+++..++.
T Consensus 321 WWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 321 WWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 88899999888887777777655443
No 164
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.09 E-value=4.9e-09 Score=109.20 Aligned_cols=153 Identities=10% Similarity=-0.001 Sum_probs=116.4
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhccc-chHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLG-RFRTLLYGSIASF 107 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-rr~~l~~~~~~~~ 107 (589)
|..+......++....++++.++++.|+++ .|.+..+.+.+.+.+.++..++.++.|+++|| ++ ||+.+..+.++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHH
Confidence 344444455566677778888899999874 79999999999999999999999999999999 55 5667777777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
++...+.+.. +.... ...++.|++.+...|...+.+.+..+++ +.++..+++.
T Consensus 275 ~~~~~~~~~~---------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~-----~~~g~~~~~~ 327 (355)
T TIGR00896 275 VGLCGLLFAP---------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQA-----AQAAALSAMA 327 (355)
T ss_pred HHHHHHHHhh---------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCH-----HHHHHHHHHH
Confidence 7777666543 11111 2346789999998888888777655432 3456677777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 045410 188 YFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
+...++|..++|.+.|++.++.|
T Consensus 328 ~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 328 QSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 77788899999999999998776
No 165
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.09 E-value=2.8e-09 Score=114.49 Aligned_cols=177 Identities=11% Similarity=-0.003 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
..+......++.....|++.+++|.|+++..|++..+.+++...+.+...++.+++|+++|| +|+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHH
Confidence 34455556666667778889999999998899999999999999999999999999999999 57554333333222221
Q ss_pred ---HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 110 ---MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 110 ---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.+.+.... . .+.+......++.|++.............|.+|+ +.|+++.++
T Consensus 331 ~~~~~~~~~~~---~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~ 385 (438)
T TIGR00712 331 TIAVIVYWMNP---A----------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK------KAAGTAAGF 385 (438)
T ss_pred HHHHHHHHhcC---C----------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh------hheeeehhh
Confidence 11111111 0 0223333334444544333222223456788876 457778888
Q ss_pred HHHHHHHHH-HHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 187 WYFSFTVAL-VVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 187 ~~~~~~~g~-~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
++...++|+ .++|.+.|.+.+..||...|++..+..+++.+..++.
T Consensus 386 ~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 386 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred hchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 887777774 6899999999999999999887666555555544443
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.08 E-value=1.5e-09 Score=113.39 Aligned_cols=161 Identities=12% Similarity=0.057 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH-H-HH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI-A-SF 107 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~-~-~~ 107 (589)
.++.+....++.....+++..+++.|+.+.+|++..+.+.+.+.+.++..++.++.|+++||..+||+..+.... . ..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 445555666667777778888999999999999999999999999999999999999999984233433322211 1 11
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
++........ ..+.....+..++.|+......+....+..|.+|+ +.|++..+++
T Consensus 297 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~ 351 (379)
T TIGR00881 297 VSLLVYWLNP-------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPK------KAAGTAAGFV 351 (379)
T ss_pred HHHHHHhcCc-------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc------chhHHHHHHH
Confidence 1111111111 01334455555666766556566667788898886 4578899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhH
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGF 215 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f 215 (589)
+...++|..++|.+.|.+.+.+||++.|
T Consensus 352 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 352 GFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999998764
No 167
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.08 E-value=4.1e-09 Score=109.51 Aligned_cols=155 Identities=14% Similarity=0.059 Sum_probs=126.6
Q ss_pred hHHHHHHHHHHHHHHhHhhhH-HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLI-ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
|.++......++....++... .+.+.|.++.+|.+..+.+.+.....++..++.++.|++.|| +|||+.+..+.++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHH
Confidence 334445555566666666666 667777777799999999999999999999999999999999 599999998877777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
++.....+.. . +.+.+++..++.|++.+...+...+++.|.+|+ +.|++.++++
T Consensus 289 ~~~~~~~~~~-------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~ 342 (365)
T TIGR00900 289 LAILVVGLTP-------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA------ELLGRVFGAQ 342 (365)
T ss_pred HHHHHHHhhc-------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHH
Confidence 7766666644 0 256677888899999999999999999999986 5688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 045410 188 YFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
+...++|..++|.++|++.+.+|
T Consensus 343 ~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 343 FSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999988654
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.07 E-value=1.1e-08 Score=107.76 Aligned_cols=172 Identities=9% Similarity=0.002 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+......++...+.+....++++|+.+.+|+++.+.+.+.+...++..++.++.|++.|| +|+|+.+..+.++..++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHH
Confidence 333344444445555666778888888899999999999999999999999999999999 5999999998888877776
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
+..... .+.+..++..++.+++.+...+.......+..+++ +.++.. ..+...
T Consensus 281 ~~~~~~--------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~ 333 (382)
T PRK10091 281 MLFFFG--------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGG-----ELLGAA--GGQIAF 333 (382)
T ss_pred HHHHHH--------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc-----hHHHHH--HHHHHH
Confidence 554422 02334445555556655544444443333433321 122222 234567
Q ss_pred HHHHHHHHHHHHHHHhh-cchhHhHHHHHHHHHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQTN-VSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~-~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
++|..+||.++|++.+. .+|++.+.+.+.+.++.+.....
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 89999999999999985 67999988877666555544433
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=1.5e-09 Score=116.38 Aligned_cols=162 Identities=17% Similarity=0.059 Sum_probs=123.1
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.|.++..++..++..++++......+.|.+..++ +..+.+++.+...++..++.++.|+++|| +|||+++..+.++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~ 298 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMV 298 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHH
Confidence 3445555566666666666555555555554555 56677788888889999999999999999 599999999988888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCC-cchhhhhHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPK-GKSQLESFFNW 186 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~ 186 (589)
++.+.+.+.. .+.+.+++..++.|++.+...+..+++++|..+.++.+ +.+.++..+++
T Consensus 299 ~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 358 (437)
T TIGR00792 299 LGYLIFFFAG--------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSV 358 (437)
T ss_pred HHHHHHHHcc--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHH
Confidence 8877766532 14455666777889999998999999999988754322 22346788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcch
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
+++...+|..+++.+.+++.+..||
T Consensus 359 ~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 359 RTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999887666
No 170
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.06 E-value=2.9e-09 Score=113.49 Aligned_cols=164 Identities=9% Similarity=-0.043 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHH-hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHH-HHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRT-KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTL-LYGSIASF 107 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l-~~~~~~~~ 107 (589)
..+......++....++++.+++|.|+.+ ..|++..+.+.+.....++..++.+++|+++|| ++||+.. ....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHH
Confidence 34555567777888889999999999976 357889999999999999999999999999999 5987753 33333333
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
++. ...... + +....+.+..+.++|.....+.......|.+|+ +.|++++++.
T Consensus 322 ~~~-~~~~~~--~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~a~g~~ 374 (412)
T TIGR02332 322 AGW-LLASAT--D------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL------QARAIAIAVI 374 (412)
T ss_pred HHH-HHHHhc--C------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccch------HHHHHHHHHH
Confidence 332 222111 1 111122222233333333233333444555654 5688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGC 221 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~ 221 (589)
+...++|+.++|.+.+.+.+..| |++.|++.+++
T Consensus 375 ~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 375 NATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 99999999999999999999875 99888776554
No 171
>PRK10133 L-fucose transporter; Provisional
Probab=99.06 E-value=5.8e-09 Score=111.93 Aligned_cols=164 Identities=10% Similarity=0.033 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHH-HHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYL-RTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGM 110 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~ 110 (589)
+...+..++.....++...+++.|+ ++.+|+++.+.++....+.++..++.+++|++.|| +|||+++..+.++..++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHH
Confidence 3344455666666677778888896 45789999999999999999999999999999999 599999998877776666
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH
Q 045410 111 GIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS 190 (589)
Q Consensus 111 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (589)
.+..+.. +. ..+.+.++.|++.+.+.|...+...+.+|++. . .+.++..+
T Consensus 340 ~~~~~~~---------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-----~--~as~l~~~- 389 (438)
T PRK10133 340 LISAFAG---------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-----K--YGSSFIVM- 389 (438)
T ss_pred HHHHHcC---------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-----c--cchhHHhH-
Confidence 5554432 11 12455678899999999999999999887532 1 12333222
Q ss_pred HHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHH
Q 045410 191 FTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSI 226 (589)
Q Consensus 191 ~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~ 226 (589)
..+|+.++|.+.|++.+..| -+..|+++.+..+...
T Consensus 390 ~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 390 TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 33577788888899999887 7888877665544443
No 172
>PRK10504 putative transporter; Provisional
Probab=99.05 E-value=8.5e-09 Score=111.82 Aligned_cols=158 Identities=11% Similarity=-0.040 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
|.....+...++...++.......+.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++..+.++..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3444455566666666555556677777777999999999999988888888899999999995 999999999888887
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
+..++.+... ..+.+.+.+..++.|++.+...+..+.+..+.+|+ +.++..+++++
T Consensus 340 ~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~ 395 (471)
T PRK10504 340 VSLLFMLVAL------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD------NLASSGNSLLS 395 (471)
T ss_pred HHHHHHhccc------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH------HhccchHHHHH
Confidence 7666655320 01333444556677888888888888999998876 34667889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcch
Q 045410 189 FSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
....+|..+|+.+++.+.+..++
T Consensus 396 ~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 396 MIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999998876655
No 173
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.05 E-value=6.5e-09 Score=109.85 Aligned_cols=174 Identities=14% Similarity=0.006 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHH-HHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGG-SSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
.+..+...++...+.+...++.++|+.+ .|+++++.+++...... ...++.+++|++.|| +|+|+.+..+.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 3444445566666666677788888875 79999999999888765 566778999999999 59999999887765443
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
............ ..+....+...++.+++.+...+...+...+..+++ +.+++.+++.+.
T Consensus 288 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~ 347 (390)
T TIGR02718 288 ALLWFAQAAFWL---------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG-----DQAGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHHccc---------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----cchHHHHHHHHH
Confidence 332222110000 002233444445556666776677777777765541 246678888888
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHH
Q 045410 190 SFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSI 226 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~ 226 (589)
..++|..++|.++|++.+..|++..|.+.+++.+++.
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 8999999999999999999999988887766555543
No 174
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.05 E-value=1.4e-08 Score=108.05 Aligned_cols=189 Identities=12% Similarity=0.024 Sum_probs=128.8
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.+.+|.+....++...+|.+...++|.|+++.+ +.........+..+...+..+++|+++|| +|+||++.++.+.+.
T Consensus 251 ~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~ 327 (462)
T PRK15034 251 RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMA 327 (462)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHH
Confidence 344576777777777777777778999988755 33344434455678889999999999999 599999999998877
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCc-----------
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKG----------- 176 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~----------- 176 (589)
++........ |.- ...+.+.+.+..+...++.|.-......++.+.||+++.++
T Consensus 328 i~~~~~~l~l--p~~-------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~ 392 (462)
T PRK15034 328 IFSALLFLTL--PGT-------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA 392 (462)
T ss_pred HHHHHHHHHh--ccc-------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHH
Confidence 7765543322 210 01255666666666666667767777888888887411111
Q ss_pred ----chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 177 ----KSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 177 ----~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
+++-+...++......+|+++-|.+.+...+..| +...|+...+..++++++-+..+.
T Consensus 393 ~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 393 QREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1245566777777888888899988777776654 777777777776666666555443
No 175
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=4.5e-09 Score=100.89 Aligned_cols=171 Identities=13% Similarity=0.105 Sum_probs=135.6
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHH
Q 045410 20 DSQRPKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTL 99 (589)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l 99 (589)
+-+..+...+..|.+..+.++.....+=..+.-+.+.++.+|+|+.+++.+.+......++.+++.|.++||+ ||+-..
T Consensus 255 kLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~w 333 (459)
T KOG4686|consen 255 KLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWW 333 (459)
T ss_pred ccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehh
Confidence 3444556777888888888888777777777778999999999999999999999999999999999999996 999776
Q ss_pred HHHH-HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcch
Q 045410 100 LYGS-IASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKS 178 (589)
Q Consensus 100 ~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 178 (589)
+.+. ++...+.....++.. .=+.+..+.|+.........++.++...|+ +
T Consensus 334 v~~a~~~tl~~H~~l~Ft~l-----------------------sPy~~m~~lGLsysllAcslWP~va~~vpE------~ 384 (459)
T KOG4686|consen 334 VASACILTLLGHSGLFFTFL-----------------------SPYTSMTFLGLSYSLLACSLWPCVASLVPE------E 384 (459)
T ss_pred HHHHHHHHHHHhhhHHhhhc-----------------------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCH------H
Confidence 6664 455667777777652 234556677888777777788888888886 5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc---hhHhHHHHHH
Q 045410 179 QLESFFNWWYFSFTVALVVALTAVVYIQTNVS---WILGFAIPTG 220 (589)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g---~~~~f~~~~~ 220 (589)
+.+++++..+...|+|-.+.|+++|.+.+.-| |--.|++...
T Consensus 385 qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 385 QLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred HhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 68889999999999999999999999998654 3335554443
No 176
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.04 E-value=2.4e-08 Score=108.48 Aligned_cols=155 Identities=8% Similarity=-0.042 Sum_probs=110.2
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 045410 54 VYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCP 133 (589)
Q Consensus 54 ~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 133 (589)
+++.+++|++..+..+......+...++.+++|+++|| +|||+.++.+.++.+++.+.+......+.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~~------------ 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQA------------ 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcCc------------
Confidence 44446789988888888888888889999999999999 59999999999999988887765431110
Q ss_pred CCCchhHHHHHHHHHHHHHhhcc-ccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH------
Q 045410 134 QPEGWQLSILYAGLALLAIGSGG-IRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQ------ 206 (589)
Q Consensus 134 ~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------ 206 (589)
.......+.++.+++.+. ..|+.+.++.|.+|+ +.|++++++.+...++|.++++.+.+.+.
T Consensus 362 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~------~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~ 430 (479)
T PRK10077 362 -----PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPN------AIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV 430 (479)
T ss_pred -----ccHHHHHHHHHHHHHHhccccchhHHHhHhhCCh------hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence 111233344444444443 347788999999986 45888999988888888888866655443
Q ss_pred hhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 207 TNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 207 ~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
+.++|++.|++.++..+++.++.+..
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHhc
Confidence 56788888887665555554444433
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.02 E-value=5.6e-09 Score=113.39 Aligned_cols=171 Identities=9% Similarity=-0.059 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchH-----HHH--HHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFR-----TLL--YGSI 104 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-----~l~--~~~~ 104 (589)
+.+.+..++.....+++..+++.|+.+++|++..+++.+.+++.++..++.+++|+++|| +|||+ ... +..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHHH
Confidence 334444444445556677889999998899999999999999999999999999999999 58762 222 2222
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+..++..+..... +.+..++..++.+++.+...+...++..+..| +.++...
T Consensus 334 l~~i~~~~~~~~~---------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 385 (476)
T PLN00028 334 LGGVFCIWLGRAN---------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR-------RSLGVIS 385 (476)
T ss_pred HHHHHHHHhcccc---------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-------hhchhhh
Confidence 2222222222211 33344444555566555555555666666543 2466677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
++.+...++|+.+++.+.+ ..+..+|+..|++.+++.+++.++.++.
T Consensus 386 g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 386 GLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 7766666666666665433 2223468899988877777666655544
No 178
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.02 E-value=1.6e-08 Score=108.06 Aligned_cols=147 Identities=17% Similarity=0.078 Sum_probs=106.6
Q ss_pred hHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 045410 44 ASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLR 123 (589)
Q Consensus 44 ~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~ 123 (589)
..+.+..+++.|+.+ .|.+..+.+.+.+...++..++.++.|+++|| +|||+.+..+.++..++.+...... .
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRIP---Q-- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHc---c--
Confidence 334566778888875 69999999999999999999999999999999 5999999988877666554444322 0
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 045410 124 PPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVV 203 (589)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 203 (589)
.....+....+..+++..+..+..+.++.|.+|+ +.|++.+++.+...++|+.++|.+.+
T Consensus 319 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 319 --------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPL------EVRGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred --------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcH------HHHhhhhhHHHHHHhHHHHHHHHHHH
Confidence 0112122222222233334456677888999986 45778899988888999999999999
Q ss_pred HHHhhcchhHhHHH
Q 045410 204 YIQTNVSWILGFAI 217 (589)
Q Consensus 204 ~l~~~~g~~~~f~~ 217 (589)
++.+.+|+....++
T Consensus 379 ~l~~~~g~~~~~~~ 392 (426)
T PRK12307 379 WLGITMGLGAALTF 392 (426)
T ss_pred HHHHcccHHHHHHH
Confidence 99998886654333
No 179
>PRK10054 putative transporter; Provisional
Probab=99.01 E-value=8.2e-09 Score=109.34 Aligned_cols=174 Identities=9% Similarity=0.030 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHH--hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRT--KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
|..+......++..+.+.....+++.|+.. +.+.+....+.+............++.|++.||+ ++|+.+..+.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 344444455566555555555666777643 4566677778888888888778888999999995 9999999998888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++...+.+.. .+.+.+++..++.++|.+...|...+++.+..|++ .|++.++.
T Consensus 285 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~------~~~~~~~~ 338 (395)
T PRK10054 285 VIGLVGFIFSG--------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG------MKASYFSA 338 (395)
T ss_pred HHHHHHHHHcc--------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc------cceehHhH
Confidence 88877766532 14555667778999999888888888999988763 24455665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~ 230 (589)
.. ...+|..+||.++|.+.|+.|....|++.+....+..++.+
T Consensus 339 ~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 339 QS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 43 55689999999999999999988888776555555544444
No 180
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.01 E-value=3.6e-11 Score=130.99 Aligned_cols=189 Identities=14% Similarity=0.171 Sum_probs=3.0
Q ss_pred HHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHh
Q 045410 37 NETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLT 116 (589)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~ 116 (589)
..++. ...++.......-+++.|+++.++.|++.+.+-++..+..++..++++|. -|-|.+-.|.+++++|++++++
T Consensus 11 ~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l- 87 (539)
T PF03137_consen 11 LGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL- 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc-
Confidence 33444 66677777777788999999999999999999999999999999999994 7889999999999999998876
Q ss_pred hcCCCCCCCCCC--------------CCCC---------------C----CCCchhHHHHHHHHHHHHHhhccccccHHH
Q 045410 117 ASIPKLRPPDCT--------------GAQC---------------P----QPEGWQLSILYAGLALLAIGSGGIRPCNIA 163 (589)
Q Consensus 117 ~s~~~~~~~~~~--------------~~~~---------------~----~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 163 (589)
|++..+.|. ...+ - .........++++.++.|+|....++.-.+
T Consensus 88 ---Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 88 ---PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred ---cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 333322220 0011 0 111112467899999999999999999999
Q ss_pred HhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------cc-hhHhHHHHHHH
Q 045410 164 FGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTN---------------------VS-WILGFAIPTGC 221 (589)
Q Consensus 164 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------------~g-~~~~f~~~~~~ 221 (589)
|+=|..++++ -....++.+....+|..+|.++++.+... .| ||..|.+.+++
T Consensus 165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999877633 33457888888889999998888776521 23 88888887777
Q ss_pred HHHHHHHHHHhhcccc
Q 045410 222 FFLSIVVFLIGYHTYI 237 (589)
Q Consensus 222 ~~i~~~~~~~~~~~~~ 237 (589)
.++..+.++...++.+
T Consensus 239 ~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 239 LFLSAIPLFFFPKKLP 254 (539)
T ss_dssp ----------------
T ss_pred HHHHHHHHHcCCccCC
Confidence 6666655555544443
No 181
>TIGR00895 2A0115 benzoate transport.
Probab=99.00 E-value=5.9e-09 Score=109.67 Aligned_cols=148 Identities=12% Similarity=-0.013 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+..+...+..++....++.+..+++ ++.+++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+....+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 3344444555666677777777777 66678999999999999999999999999999999994 999554443333333
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
..++..... +.+..++..++.|++.+...+...+++.|.+|+ +.|++.+++.+
T Consensus 328 ~~~~~~~~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~ 380 (398)
T TIGR00895 328 AVLVGSTLF---------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT------AIRATGVGWAI 380 (398)
T ss_pred HHHHHHHhh---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH------HHHHHHHHHHH
Confidence 333222122 445566777889999999999999999999986 46888999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045410 189 FSFTVALVVALTAVVYI 205 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l 205 (589)
....+|..++|.++|++
T Consensus 381 ~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHhHHhc
Confidence 99999999999998875
No 182
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.00 E-value=4.1e-08 Score=104.29 Aligned_cols=171 Identities=14% Similarity=-0.064 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGM 110 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~ 110 (589)
++......++.....+......+.|+.+.+|+++.+.++.......+..++.++.|+++|| +|+|+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 3433344444455556666777888888899999999998888888888999999999999 599999999988888887
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH
Q 045410 111 GIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS 190 (589)
Q Consensus 111 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (589)
....+....+ ..+.+.++++.++.|++.+...+..........+ +.+++..+.+++.
T Consensus 296 ~~~~~~~~~~----------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~ 352 (406)
T PRK15402 296 LLAALATVIS----------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-------VSKGTVSAAMGML 352 (406)
T ss_pred HHHHHHHHcc----------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-------ccccHHHHHHHHH
Confidence 7776643111 1144556777888999988877776665443222 2366788888888
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHH
Q 045410 191 FTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLS 225 (589)
Q Consensus 191 ~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~ 225 (589)
..+|..+|+.+.+.+.+..++....+...+..++.
T Consensus 353 ~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 353 SMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 88999999999999888777665444444333333
No 183
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.98 E-value=7.8e-07 Score=89.86 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=105.9
Q ss_pred HhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCc
Q 045410 58 TKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEG 137 (589)
Q Consensus 58 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 137 (589)
+++|++..|.+.+.........+..++.|.++||+ |||+..+...++.++.++..-. .
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~-~-------------------- 119 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS-S-------------------- 119 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc-c--------------------
Confidence 57999999999999999999999999999999995 9999999999988887764333 2
Q ss_pred hhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcch--hHh
Q 045410 138 WQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY-FSFTVALVVALTAVVYIQTNVSW--ILG 214 (589)
Q Consensus 138 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~g~--~~~ 214 (589)
+...++++|++.|++.....++--+.+.....+..-++ +-++.-++... ..+.+-++.+..++.++.+..+. ..+
T Consensus 120 -~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~-~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaP 197 (354)
T PF05631_consen 120 -NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ-EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAP 197 (354)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcch
Confidence 57889999999999999888877766555432211111 12333333322 22334455555666666666554 678
Q ss_pred HHHHHHHHHHHHHHHH
Q 045410 215 FAIPTGCFFLSIVVFL 230 (589)
Q Consensus 215 f~~~~~~~~i~~~~~~ 230 (589)
|..+..+..++.++..
T Consensus 198 F~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 198 FDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8887776665555433
No 184
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.98 E-value=3.5e-08 Score=107.38 Aligned_cols=170 Identities=12% Similarity=0.071 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
..++...++..+....+...+|.+..+.+|.+....|++.+.+.++..++.++.+++.+| +++++.+..+.+++.++.+
T Consensus 221 ~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~ 299 (524)
T PF05977_consen 221 RSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALL 299 (524)
T ss_pred HHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHH
Confidence 333444444445545556678888889999999999999999999999999999999999 5999999999998888888
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
.++++. +.+...++.++.|++.........+.+-+..|+ +.|++.++++++..
T Consensus 300 ~lal~~---------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~------~~~GRv~si~~~~~ 352 (524)
T PF05977_consen 300 LLALSP---------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPD------WVRGRVFSIYQMVF 352 (524)
T ss_pred HHhcch---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHhHHHHHHHHHH
Confidence 888866 677788888899999988888888888888876 56889999999999
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
..+..+|..+.|.+.+.+|-+..+.++++..++..++.
T Consensus 353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888887776555554443
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.98 E-value=1.9e-08 Score=109.02 Aligned_cols=178 Identities=15% Similarity=-0.010 Sum_probs=119.8
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHH-------
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTL------- 99 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l------- 99 (589)
+++.++...+..++....++.+.+++|.|+.+.+|++..+.+++.++..++..++.+++|+++||+ ++|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~ 337 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARK 337 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHH
Confidence 345667777888888889999999999999999999999999999999999999999999999994 654321
Q ss_pred -HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcch
Q 045410 100 -LYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKS 178 (589)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 178 (589)
..+......+...+.... ... +....++...+.+.+.+...+.......|..| +
T Consensus 338 ~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~ 392 (465)
T TIGR00894 338 IFNGIGGLGPGIFAYALPY-LSA-----------------AFYLTIIILTLANAVSSGPLAGVLINSLDLAP-------R 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCC-----------------chHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-------h
Confidence 111111111111111111 000 22333444444455545444544444445443 3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc---chhHhHHHHHHHHHHHHHHHH
Q 045410 179 QLESFFNWWYFSFTVALVVALTAVVYIQTNV---SWILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 179 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---g~~~~f~~~~~~~~i~~~~~~ 230 (589)
.++...++.+...++|+.++|.+.+++.+.. +|+..|.+.++..+++.++..
T Consensus 393 ~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 393 FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 4778888999999999999999999887643 378888887766666654433
No 186
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.97 E-value=4.9e-08 Score=103.63 Aligned_cols=152 Identities=16% Similarity=0.144 Sum_probs=104.6
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHH-HHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWG-GSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCT 128 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 128 (589)
.+.+.++.+++|+++.+.+++.+... .+..++.+++|++.|| +|||+.+..+.++..+..+.+......+.
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~~------- 301 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTPK------- 301 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 44556777889999999999987654 4678999999999999 59999988877776665444432110111
Q ss_pred CCCCCCCCchhHHHHHHHH----HHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 129 GAQCPQPEGWQLSILYAGL----ALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVY 204 (589)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 204 (589)
+.+.+++.. +..|++.+...+....++.+.+|.+ . .+++....++|..+++.++|.
T Consensus 302 ----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~l~~~~~~~~~G~ 361 (402)
T PRK11902 302 ----------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT------Q----YALLSALASVGRVYVGPTSGY 361 (402)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH------H----HHHHHHHHHHHHHHHHHHHHH
Confidence 334444443 3455666666777777777776642 2 344444456777766678999
Q ss_pred HHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 205 IQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 205 l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
+.+.+||+..|.+.+++.++++++.
T Consensus 362 l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 362 LVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHH
Confidence 9999999999998877776665544
No 187
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.96 E-value=1.9e-08 Score=107.78 Aligned_cols=165 Identities=18% Similarity=0.120 Sum_probs=135.6
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
+.|.....++..++..++.....+..+.|.+..+|.+ ...+.+..+..+...++.++.++++|| +|+|+++..+.++.
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~ 300 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLA 300 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHH
Confidence 4466667777888888887777777777877778877 567788888999999999999999999 59999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCC-cchhhhhHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPK-GKSQLESFFN 185 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~ 185 (589)
+++.++..+.. ..+.+.+++..++.|++.+...+...++++|..+.++.+ +++.-+..++
T Consensus 301 ~~~~~~~~~~~-------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 301 ALGFLLLFFLG-------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHHHH-------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 99999888764 126788888999999999999999999999999865433 2334567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchh
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWI 212 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~ 212 (589)
.+.....+|..+++.+.+.+.+..|+.
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 899999999999999999887665543
No 188
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.96 E-value=7.1e-08 Score=102.16 Aligned_cols=164 Identities=5% Similarity=-0.077 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
.++..+...++...+.++..+++++++.+++|++..+.+.+...+.++..++.++.|++.||. +| +.++.+.++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~-~~l~~~~~~~~~~ 294 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VK-LALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch-hHHHHHHHHHHHH
Confidence 344444445555566666667775655668899999999999999999999999999999993 54 4444444443333
Q ss_pred -HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 110 -MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 110 -~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
.++..... +.+.+.+..++.|++.+...+...+++.+..|++ +++..+++.
T Consensus 295 ~~~l~~~~~---------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 346 (394)
T PRK10213 295 ALVLTLWGS---------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQV 346 (394)
T ss_pred HHHHHHHhh---------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHH
Confidence 33333322 4566777788899999999998898888887642 223345555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHH
Q 045410 189 FSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFF 223 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~ 223 (589)
...++|..+|+.++|++.+..|++..+...+++.+
T Consensus 347 ~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 347 AVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 67789999999999999999998888887665443
No 189
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.96 E-value=1.7e-08 Score=109.72 Aligned_cols=155 Identities=11% Similarity=0.029 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
..+......++..+.+++...+++.|+++.+|+++.+.+++.....++..++.++.|++.|| +|||+.+.++.++..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 256 NFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAVG 334 (485)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHHH
Confidence 34445566677778888888899999999999999999999999999999999999999999 59999999998888888
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
..++.+.. .+. .+.+.+....++.|+|.+...+.......+..|+ +.|+++.++++.
T Consensus 335 ~~~~~~~~-~~~----------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~ 391 (485)
T TIGR00711 335 FYWRAFTF-TPD----------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP------HKIARGSSLSNF 391 (485)
T ss_pred HHHHhccC-CCC----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH------HHHhHHHHHHHH
Confidence 87766321 010 1345566667888999988877777777777775 457788999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 045410 190 SFTVALVVALTAVVYIQTN 208 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~ 208 (589)
..++|..+|+.+.+.+.++
T Consensus 392 ~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 392 TRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888764
No 190
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.94 E-value=5.2e-08 Score=102.25 Aligned_cols=160 Identities=10% Similarity=0.048 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+.......+....++....+.+.|+.+.+|.++.+.+.+.+...++..++.++.|++.|| +|||+.+..+.++..++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~ 287 (385)
T TIGR00710 209 WGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSAV 287 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHH
Confidence 333344445555667777778888988999999999999999999999999999999999 5999999999888888777
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
++......+ ......++...++.|++.+...+.......|.+|+ .+++..++++...
T Consensus 288 ~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~ 344 (385)
T TIGR00710 288 LLEITAILG----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-------VAGTASALFGTLR 344 (385)
T ss_pred HHHHHHHhc----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-------cchHHHHHHHHHH
Confidence 666543111 01334455566778899998888888888887653 2556677766655
Q ss_pred H-HHHHHHHHHHHHHHhhcchhHhHH
Q 045410 192 T-VALVVALTAVVYIQTNVSWILGFA 216 (589)
Q Consensus 192 ~-~g~~~~~~~~~~l~~~~g~~~~f~ 216 (589)
. .|++.++. .+.+.+..+|...+.
T Consensus 345 ~~~g~i~~~~-~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 345 LVLGAIVGYL-VSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHH-HHhccccChHHHHHH
Confidence 4 45555554 445555444544433
No 191
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.92 E-value=2.4e-08 Score=102.04 Aligned_cols=166 Identities=13% Similarity=0.091 Sum_probs=134.3
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
...++..=+.-++.+.-..|...++|++..+...+.....+...+++++.|+|.|| +|-|+++.++++++.+.++...+
T Consensus 259 iA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~~~ 337 (438)
T COG2270 259 IARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYLIF 337 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHHHH
Confidence 34444444445667777889889999999999999999999999999999999999 59999999999998888877777
Q ss_pred hhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHH
Q 045410 116 TASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVAL 195 (589)
Q Consensus 116 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 195 (589)
.. ....++++-++.|+..|...+.+=++.++..|++++. +.|++|......+.
T Consensus 338 ~~---------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~------~fFglyaltgra~S 390 (438)
T COG2270 338 LE---------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEG------RFFGLYALTGRAAS 390 (438)
T ss_pred cc---------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcccc------ceeehhhhhhhHHH
Confidence 54 2234666667899999999999999999999986543 46999999999999
Q ss_pred HHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHH
Q 045410 196 VVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 196 ~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~ 229 (589)
++||.+.+.+.+..| -|..+....++..++++++
T Consensus 391 ~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 391 FLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 999999999988665 6666665555555555443
No 192
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.92 E-value=3.3e-08 Score=107.94 Aligned_cols=153 Identities=10% Similarity=-0.063 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
.........++..+.+++...+++.|+++.+|+++.+++.......++..++.++.|++.|| +|||+.+..+.++..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSALS 338 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHH
Confidence 33445556667777778888899999999999999999999999999999999999999999 59999999898888887
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
...+.+... . .+.+..+...++.|+|.|...+.....+.+..|+ +.++.+.++++.
T Consensus 339 ~~~l~~~~~-~-----------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~------~~~g~~~~~~~~ 394 (495)
T PRK14995 339 FYGLAMTDF-S-----------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPP------EKAAAAGAIETM 394 (495)
T ss_pred HHHHHHhcC-C-----------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCH------HhcchHHHHHHH
Confidence 776655321 0 1334556677889999999888888888888776 346677888889
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 045410 190 SFTVALVVALTAVVYIQT 207 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~ 207 (589)
..++|..+|+.+.+.+.+
T Consensus 395 ~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 395 AYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999888765
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.91 E-value=5.3e-08 Score=103.32 Aligned_cols=153 Identities=13% Similarity=0.080 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 48 LIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
...++|.|+++..+ ++.+.+++.+...+....+..+.+++.||.++.++.+..+.++..++..++.+.+
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 44567888876555 7788888888877766655555566665535777777788877777777666655
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+.+.+++..++.+++.+...|...+++.|..|+ +.|++.+++++...++|..+||.++|++.+
T Consensus 296 -----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~------~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 296 -----------NLQQLFTLICLFYIGSIIAEPARETLSASLADA------RARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCc------ccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 445566667788888888889999999999986 347778889989999999999999999988
Q ss_pred hcc----hhHhHHHHHHHHHHHHHH
Q 045410 208 NVS----WILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 208 ~~g----~~~~f~~~~~~~~i~~~~ 228 (589)
..+ ....+.+..++.++..+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 359 LGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHhhcCCcchHHHHHHHHHHHHHHH
Confidence 642 244555444444444433
No 194
>PRK09848 glucuronide transporter; Provisional
Probab=98.91 E-value=2.7e-08 Score=107.25 Aligned_cols=164 Identities=16% Similarity=0.176 Sum_probs=123.8
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.|.++....+.++...+++......+.|+++.+|.++...++......++..++.++.++++|| +|+|+++.++.++..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGT 305 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHH
Confidence 3445555566666667766666666777777788877666655555566778899999999999 599999999999888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCC-cchhhhhHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPK-GKSQLESFFNW 186 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~ 186 (589)
++.+.+.+.. ..+.+.+++..++.++|.+...+...++.+|..|+++.+ +.+..+..++.
T Consensus 306 i~~~~~~~~~-------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~ 366 (448)
T PRK09848 306 CGYLLFFWVS-------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSL 366 (448)
T ss_pred HHHHHHHHcC-------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHH
Confidence 8877776532 114566677778899999999999999999988765322 22345777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcch
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
+++...+|..+|+.+.+.+.+..||
T Consensus 367 ~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 367 FSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999888765554
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.91 E-value=4.6e-08 Score=117.92 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchh-HHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGI-LLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
++..+...++..+..+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++.+.++.++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHH
Confidence 34344444455555566778899999999999999 999999999999999999999999994 9999999888888887
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
.+++.+.. +.+.++++.++.|++.+...+...+++.+..|+ +.|++++++.++
T Consensus 313 ~~~~~~~~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~------~~rg~~~~~~~~ 365 (1146)
T PRK08633 313 LFLLPTAP---------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE------KELGKVLAANNF 365 (1146)
T ss_pred HHHHHHhh---------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc------cchhhhhHHHHH
Confidence 77776654 556677778889999999888899999998886 347788999888
Q ss_pred HHHHHHHHHHHHHHHHHhh-cchhHhHHHHHH
Q 045410 190 SFTVALVVALTAVVYIQTN-VSWILGFAIPTG 220 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~-~g~~~~f~~~~~ 220 (589)
..++|.++++.+++.+... +++...|++.+.
T Consensus 366 ~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 366 LQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 8889998888777666542 344445554443
No 196
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.90 E-value=2.8e-08 Score=108.71 Aligned_cols=165 Identities=13% Similarity=0.020 Sum_probs=105.2
Q ss_pred HHHHHHhHhhhHHHHHHHHHHhcCCchhHHHH------------HHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 38 ETFEKLASMSLIANMTVYLRTKYNMDGILLVN------------VVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.++..+.+|++..+.|.++. ..|++..+.+. ...+..++..++.++.++++|| +|||+.++++.++
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~ 374 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHH
Confidence 34455677888788787774 67876543221 1233334555678899999999 5999999998887
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHH
Q 045410 106 SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFN 185 (589)
Q Consensus 106 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 185 (589)
.+++..+..+...... ....+....+...++..+..+....+.+|.+|+ +.|+++.+
T Consensus 375 ~~~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~------~~R~~~~g 431 (502)
T TIGR00887 375 LTVLFFVLGFAYNHLS-----------------THGFLAIYVLAQFFANFGPNATTFIVPGEVFPT------RYRSTAHG 431 (502)
T ss_pred HHHHHHHHHHHHHhcc-----------------hhHHHHHHHHHHHHHhcCCCchhhhhhhccCch------hHHHHHHH
Confidence 7777666654320000 111111111122222333456677888999997 56889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh----------cchhHhHHHHHHHHHHHHH
Q 045410 186 WWYFSFTVALVVALTAVVYIQTN----------VSWILGFAIPTGCFFLSIV 227 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~----------~g~~~~f~~~~~~~~i~~~ 227 (589)
+.+....+|++++|.+.+++.+. .++...|++.++..+++.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 432 ISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 99999999999999999998873 2344455555544444433
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.83 E-value=7e-08 Score=116.23 Aligned_cols=183 Identities=9% Similarity=-0.063 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
|.++...+..++..+.++++.++++.|+.+.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 3455555666666677777888999999999999999999999999999999999999999985 877777766666666
Q ss_pred HHHHHHHhhcCCCCCCCCC-CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDC-TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
+.+.+.+.. ......+.. ..-..+. ...+.+.++++.++.|++.+...+...+++.+.+|++ .|++.++.+
T Consensus 304 ~~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~------~~G~v~g~~ 375 (1140)
T PRK06814 304 FGLDLAFAS-SSVPAEPAQLKSILVFL-SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA------HRARVIAAN 375 (1140)
T ss_pred HHHHHHhcc-cccccccccccchhhhh-cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc------cceeeeHHH
Confidence 555444420 000000000 0000000 0014466777888899999999999999999999874 466788998
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hcchhHhHHHHHH
Q 045410 188 YFSFTVALVVALTAVVYIQT-NVSWILGFAIPTG 220 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~-~~g~~~~f~~~~~ 220 (589)
+...++|..+++.+.+.+.+ ..++...|++.+.
T Consensus 376 ~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 376 NVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 88999999999999888874 3455655554443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.79 E-value=8.6e-08 Score=99.84 Aligned_cols=144 Identities=17% Similarity=0.043 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHH-HHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWG-GSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
.+..++..++..++++...++++.|+.+ +|++..+.+.+.++.. +...++.+++|+++|| +|||+.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHH
Confidence 5555566677788888888999999986 9999999998888766 5678999999999999 59999999998887777
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
.....+..+..... + ....+.+.+..+.++.+++.+...+...+++.|.+|+ +.|++.+++++.
T Consensus 289 ~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~------~~~g~~~g~~~~ 352 (356)
T TIGR00901 289 NAGFVWLASNGHHD--------G--ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP------KFGATQMALLSS 352 (356)
T ss_pred HHHHHHHHhcCccc--------c--cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC------CccHHHHHHHHH
Confidence 66555432111000 0 0001446677778888999999999999999999997 457778888665
Q ss_pred HHH
Q 045410 190 SFT 192 (589)
Q Consensus 190 ~~~ 192 (589)
..+
T Consensus 353 ~~~ 355 (356)
T TIGR00901 353 LSA 355 (356)
T ss_pred HHh
Confidence 543
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.79 E-value=2.8e-07 Score=96.56 Aligned_cols=166 Identities=11% Similarity=-0.023 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccch---HHHHH-HHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRF---RTLLY-GSI 104 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~~l~~-~~~ 104 (589)
|.++.+....++....+|++.+++|.|+++ .|++.. .+....+..+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 556777778899999999999999999964 678764 565555555544444 57888884 653 33232 333
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
+.++......+.. +....++...+.+++.....+..+++.+|.+|+ +.|+++.
T Consensus 266 ~~a~~~~~~~~~~---------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~------~~rgt~~ 318 (368)
T TIGR00903 266 LIAAFFLALAFEL---------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK------ELHGKAA 318 (368)
T ss_pred HHHHHHHHHHHcc---------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch------hhcCccc
Confidence 3333333333322 222334444556666666677788999999997 4588899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHH
Q 045410 185 NWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 185 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~ 229 (589)
++.+...++|++.+|.+.+.+.. +.+..|.+.+...+++.+..
T Consensus 319 G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 319 GAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred chhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887773 55556665555544444443
No 200
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.79 E-value=2e-07 Score=101.16 Aligned_cols=166 Identities=17% Similarity=0.073 Sum_probs=118.2
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.|.++..+...++.....+...+..+ |+.+...-+....+.+.++..+...++.++.++++|| +|+|++++++.++.+
T Consensus 230 n~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~ 307 (473)
T PRK10429 230 NDQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPV 307 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHH
Confidence 36666666667777666665555554 4433333356666777777778888999999999999 599999999988777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCC-CCcchhhhhHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTT-PKGKSQLESFFNW 186 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~ 186 (589)
++.+...+....+ ..+.+.+++.-++.+++.+...+...++++|..+.++ +.+++..+..++.
T Consensus 308 ~~~~~~~~~~~~~----------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 308 LSCGVLLLMGLAA----------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHHhccC----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 7666654421011 1145666677778899999999999999999977542 2222334567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcch
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
+.+...+|..+++.+.|++.+..|+
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8888999999999999998876655
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.78 E-value=5.6e-07 Score=95.26 Aligned_cols=157 Identities=13% Similarity=-0.021 Sum_probs=115.6
Q ss_pred HHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCC
Q 045410 42 KLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPK 121 (589)
Q Consensus 42 ~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~ 121 (589)
..........++.|+++.+|.++.+.|.+.+...++..++.++.+++.||+ ++|+++..+.+ ..+....+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh----
Confidence 344455556677888888999999999999999999999999999999995 99998887753 333333333333
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 045410 122 LRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTA 201 (589)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 201 (589)
+.+...+..++.|++.+...+...+.+.+..|+ + ..+++.+++.+...++|..++..+
T Consensus 292 -----------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~-~----~~~g~~~a~~~~~~~~~~~~~~~~ 349 (393)
T PRK11195 292 -----------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHV-L----VGAGHSIAVQNFNENLAMLLMLGL 349 (393)
T ss_pred -----------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcc-c----ccchhHHHHHhHHHHHHHHHHHHH
Confidence 455566677788999888888888888775332 1 235778888889999999999988
Q ss_pred HHHHHhhcchhHhHHHHHHHHHHHHH
Q 045410 202 VVYIQTNVSWILGFAIPTGCFFLSIV 227 (589)
Q Consensus 202 ~~~l~~~~g~~~~f~~~~~~~~i~~~ 227 (589)
.+.+ +..|-+..+.+..+..++.+.
T Consensus 350 ~~~~-~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 350 YSLL-VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred HHHH-HHcCCCHHHHHHHHHHHHHHH
Confidence 8755 557777666665554444433
No 202
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.78 E-value=2e-07 Score=97.82 Aligned_cols=146 Identities=12% Similarity=0.004 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+......++...+.+....+.+.++.+.+|+++.+.+.+.+...++..++.++.|+++|| +|||+.+..+.++..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHH
Confidence 333334444445555666667778888899999999999999999999999999999999 5999999988876555433
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH-
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS- 190 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~- 190 (589)
........+ .+.+.+.++..+.+.+.+...+.....+.|..|+ .+++..+..+..
T Consensus 276 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~ 331 (377)
T PRK11102 276 WLVVSALLD-----------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-------MAGTASSLAGTLR 331 (377)
T ss_pred HHHHHHHHh-----------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-------cchHHHHHHHHHH
Confidence 332221011 1334444444455555555556666677776653 244455553332
Q ss_pred HHHHHHHHHHHH
Q 045410 191 FTVALVVALTAV 202 (589)
Q Consensus 191 ~~~g~~~~~~~~ 202 (589)
..+|..+++.++
T Consensus 332 ~~~g~~~g~~~~ 343 (377)
T PRK11102 332 FGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHH
Confidence 345666666543
No 203
>TIGR00898 2A0119 cation transport protein.
Probab=98.77 E-value=1.1e-07 Score=104.13 Aligned_cols=140 Identities=14% Similarity=0.010 Sum_probs=98.8
Q ss_pred hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCch
Q 045410 59 KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGW 138 (589)
Q Consensus 59 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 138 (589)
.++.+.... .....+....+.++.++++|| +|||+.+.++.++..++.+++.+..+.
T Consensus 352 ~~~~~~~~~---~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~~------------------- 408 (505)
T TIGR00898 352 NLGGNIYLD---LFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPVD------------------- 408 (505)
T ss_pred ccCCChHHH---HHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCCC-------------------
Confidence 455554333 334455667788899999999 599999999988888887777664410
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHH
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIP 218 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~ 218 (589)
..+...+..++.+++.+...+..+.+..|.+|+ +.|++++++.+....+|++++|.+.+ +. ..++..++.+.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~ 480 (505)
T TIGR00898 409 LYFLRTALAVLGKFGITSAFQMVYLYTAELYPT------VVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLF 480 (505)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccccH------HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHH
Confidence 123344444556666677778889999999987 45888899999999999999999888 44 35566666665
Q ss_pred HHHHHHHHHHH
Q 045410 219 TGCFFLSIVVF 229 (589)
Q Consensus 219 ~~~~~i~~~~~ 229 (589)
+++.+++.+..
T Consensus 481 ~~~~~~~~~~~ 491 (505)
T TIGR00898 481 GGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHH
Confidence 55554444433
No 204
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.77 E-value=3.2e-07 Score=96.90 Aligned_cols=143 Identities=8% Similarity=0.023 Sum_probs=93.1
Q ss_pred HhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 045410 45 SMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRP 124 (589)
Q Consensus 45 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~ 124 (589)
......+.+.|+.+++|+++.+.+.+.+...+...++.++.|++.|| +|||+.+..+.++..++.+.+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~------- 290 (392)
T PRK10473 219 ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLALSP------- 290 (392)
T ss_pred HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 33444556777888899999999999999999999999999999999 5999999999998888888777754
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 125 PDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVY 204 (589)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 204 (589)
+.+..+....+.+.|.+...+.. ...+..|.++ + -+...+ ...++..+++.++++
T Consensus 291 --------------~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~---~--~g~~~~----~~~~~~~~g~~~~~~ 345 (392)
T PRK10473 291 --------------SHAVSLFGITLICAGFSVGFGVA--MSQALGPFSL---R--AGVASS----TLGIAQVCGSSLWIW 345 (392)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcc---c--ccHHHH----HHHHHHHHHHHHHHH
Confidence 22233333334344433333332 2233444321 1 112222 334566677777778
Q ss_pred HHhhcchhHhHHHHHH
Q 045410 205 IQTNVSWILGFAIPTG 220 (589)
Q Consensus 205 l~~~~g~~~~f~~~~~ 220 (589)
+.+..|+.....+.+.
T Consensus 346 l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 346 LAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHhccchhHHHHHH
Confidence 8777777654444333
No 205
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.75 E-value=4.4e-08 Score=101.27 Aligned_cols=141 Identities=17% Similarity=0.115 Sum_probs=116.3
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHH
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMD-GILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGI 112 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~ 112 (589)
.+...++..+.++....+++.|+.+.+|++ ..+.+.+.++..+...++.++.|+++|| +|+|+.+........++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHH
Confidence 444555555677778899999999999999 8999999999999999999999999999 59998888888877777766
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHH
Q 045410 113 MTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFT 192 (589)
Q Consensus 113 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 192 (589)
+.+.... .+....+...++.|++.+...+...+++.|.+|+ +.+++..++++...+
T Consensus 290 ~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~ 345 (352)
T PF07690_consen 290 LLLLPFS------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPP------EYRGTAFGLFNSIGS 345 (352)
T ss_dssp HCCSHHH------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT------CHHHHHHHHHHHHHH
T ss_pred HHHHHHh------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHH
Confidence 6654311 1455666677889999999999999999999986 458889999999999
Q ss_pred HHHHHHH
Q 045410 193 VALVVAL 199 (589)
Q Consensus 193 ~g~~~~~ 199 (589)
+|..+||
T Consensus 346 ~~~~igP 352 (352)
T PF07690_consen 346 LGGIIGP 352 (352)
T ss_dssp HHHHHHH
T ss_pred HHHHHCC
Confidence 9999887
No 206
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.75 E-value=8.9e-07 Score=88.86 Aligned_cols=160 Identities=13% Similarity=0.081 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
..|.+..--=+.++.+|.+..|+|.++. +.|+|..++|++++...+......+..-++++|.-.+|+..+....++.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 3455555555678889999999999997 679999999999999999999999999999997656777777778888889
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
...+.+.+ .+...+. .+++|+|.|..+|....++.+-.++. ++-++..++-+.
T Consensus 288 ~~G~~~~P--------------------~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a-----~~Aa~LSgmaQg 340 (395)
T COG2807 288 LVGLLLAP--------------------GQLPILW--ALLLGLGQGGAFPLALTLILLRSSDA-----AIAAALSGMAQG 340 (395)
T ss_pred HHHHHHhh--------------------hhHHHHH--HHHHhCccchHHHHHHHHHHhhcCCh-----HHHHHHHHHhhh
Confidence 88888755 1222233 47899999999999999999976542 233344455444
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-hhHhHHH
Q 045410 190 SFTVALVVALTAVVYIQTNVS-WILGFAI 217 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~~g-~~~~f~~ 217 (589)
...+=+.+||.+.|++.|..| |+.....
T Consensus 341 ~GYllAa~GP~l~G~lhDa~gsw~~~~~~ 369 (395)
T COG2807 341 VGYLLAAFGPWLFGFLHDATGSWSAPLVL 369 (395)
T ss_pred hhHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence 555666789999999999775 8766554
No 207
>PRK09669 putative symporter YagG; Provisional
Probab=98.71 E-value=3e-07 Score=98.98 Aligned_cols=160 Identities=14% Similarity=0.104 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGM 110 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~ 110 (589)
.+.++...++...+.. +...+..|+.+..--++...+.+.....+...++.++.++++|| +|+|+.+..+.++..++.
T Consensus 231 ~~~l~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVV-TRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHH-HHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHH
Confidence 3334444444434432 22334444433322233344455556667777888999999999 599999998887666544
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCC-cchhhhhHHHHHHH
Q 045410 111 GIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPK-GKSQLESFFNWWYF 189 (589)
Q Consensus 111 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~ 189 (589)
....+.. + .+.+.+++..++.|++.+...+..+++++|..+.++.+ +++..+..++.+.+
T Consensus 309 ~~~~~~~--~-----------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~ 369 (444)
T PRK09669 309 ALIFFIP--P-----------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLF 369 (444)
T ss_pred HHHHHhC--c-----------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHH
Confidence 4333321 1 25666777788899999999999999999998754322 23345567788888
Q ss_pred HHHHHHHHHHHHHHHHHhhcch
Q 045410 190 SFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 190 ~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
...+|..+|+.++|++.+..|+
T Consensus 370 ~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 370 AIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999887666
No 208
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.71 E-value=4.7e-07 Score=96.37 Aligned_cols=163 Identities=11% Similarity=-0.060 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHh-cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTK-YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
..+......|+......+..++++.|+.+. .+.+....+...+.+.....++.+++|+++|| +++||++.++.++..+
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHH
Confidence 334444455555555556778889998653 25555666667777888899999999999999 5999999888888887
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
..++..+.. + .......++.|+..+.++|...++..+..+++. ....+...
T Consensus 312 ~~ll~~~~~---------------------~-~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~~l~ 362 (410)
T TIGR00885 312 LCLGSIFAG---------------------G-HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAAGLV 362 (410)
T ss_pred HHHHHHHcC---------------------C-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHHH
Confidence 777777644 1 123455667888889999999999999887532 11122222
Q ss_pred HHHHHHHHHHHHHHHHHHhhc------chhHhHHHHHHHHH
Q 045410 189 FSFTVALVVALTAVVYIQTNV------SWILGFAIPTGCFF 223 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~------g~~~~f~~~~~~~~ 223 (589)
+ ..+|+.+.|.+.|++.|.. +.+..|+++..+.+
T Consensus 363 ~-~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 363 M-AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred H-HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 2 3489999999999999954 47788887665544
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=5.3e-07 Score=95.85 Aligned_cols=188 Identities=12% Similarity=0.014 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHH
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLG 109 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~ 109 (589)
..+..+.+.+...++--....+....+-++-|++..++.++.........++.+++.++.|| +|||+.++.+..++.+.
T Consensus 270 ~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHH
Confidence 34555556666655544445555666666889999999999999999999999999999999 59999999999998888
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhh-ccccccHHHHhhccCCCCCCCcchhhhhHHHHHH
Q 045410 110 MGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGS-GGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWY 188 (589)
Q Consensus 110 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~-g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 188 (589)
.+++.....+.... ...-.+..+++.++..+.. -+..|..+-+.+|++|++ .|..++++-+
T Consensus 349 ~~~~~~~~~l~~~~------------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~------~R~aa~s~~~ 410 (485)
T KOG0569|consen 349 LLLMSIALFLSNSF------------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS------ARSAAQSVAT 410 (485)
T ss_pred HHHHHHHHHHHHHh------------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCcc------chHHHHHHHH
Confidence 77776543111100 0001112334443333222 234688899999999984 4677777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhcccc
Q 045410 189 FSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHTYI 237 (589)
Q Consensus 189 ~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~ 237 (589)
....+..++-.+.-..+.+.+|- +.|.+-.+...+..+..+...|+.+
T Consensus 411 ~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 411 AVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 77777777666666677776665 3444433333344444444445443
No 210
>PRK11043 putative transporter; Provisional
Probab=98.69 E-value=1.5e-06 Score=92.10 Aligned_cols=146 Identities=10% Similarity=-0.054 Sum_probs=104.1
Q ss_pred HHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhc
Q 045410 39 TFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTAS 118 (589)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s 118 (589)
.+....++....+++.|+. ++|++..+.++......++..++.++++++.|| +|+|+.+....+...++.+.+.....
T Consensus 213 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred HHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566677777775 589999999998888888899999999999999 59999887776665555444333220
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 045410 119 IPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVA 198 (589)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 198 (589)
.+. .+.+.++.+..+.+++.+...+...+...|..|+ .+++..++++.....++..+
T Consensus 291 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~~~~~~ 347 (401)
T PRK11043 291 LSH----------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-------ATGKAAALQNTLQLGLCFLA 347 (401)
T ss_pred hcc----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-------cChHHHHHHHHHHHHHHHHH
Confidence 110 1334455566778888888888888887777653 35667888877777788888
Q ss_pred HHHHHHHHhhc
Q 045410 199 LTAVVYIQTNV 209 (589)
Q Consensus 199 ~~~~~~l~~~~ 209 (589)
+.+.+.+.+..
T Consensus 348 ~~~~g~l~~~~ 358 (401)
T PRK11043 348 SLLVSALISTP 358 (401)
T ss_pred HHHHHHccCCC
Confidence 88888887643
No 211
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2.3e-07 Score=100.60 Aligned_cols=176 Identities=16% Similarity=0.128 Sum_probs=142.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhccc--chHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLG--RFRTLLYGSIAS 106 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~l~~~~~~~ 106 (589)
+..+....-..+..++++.-...++.|.. ..|++..+...+.++..+...++.++.|+++|+. . ++.+..++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 34455556777777888877788888887 8999999999999999999999999999999995 7 344445555555
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 107 FLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 107 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
.++...+.+.. +++.++..-++.|+..|...+.....+.|+.+.+ ....++++
T Consensus 376 gl~~~~~p~~~---------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~------~l~~a~Gl 428 (509)
T KOG2504|consen 376 GLARLFLPFAT---------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE------KLSNAYGL 428 (509)
T ss_pred HHHHHHHHHhc---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh------hcchHHHH
Confidence 55555666655 5677888888999999999888888999998874 35667899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc-hhHhHHHHHHHHHHHHHHHHHhh
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVS-WILGFAIPTGCFFLSIVVFLIGY 233 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~~ 233 (589)
......++.++||.++|++.|..+ |...|+.+++..+++..+.++..
T Consensus 429 ~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 429 LLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 888999999999999999998887 99999998888877776655544
No 212
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.67 E-value=1.7e-06 Score=90.31 Aligned_cols=178 Identities=8% Similarity=0.041 Sum_probs=137.1
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhc---CCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKY---NMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
.|+.|............|++.-.-.+.|.+..+ +.++...|.+.++..+.-.+...+..++.+| +|.|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHH
Confidence 445555554444444454544445677776433 4566778999999999999999999999999 699999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFF 184 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 184 (589)
++++=...+++++ +++.+.+.+.+.++-.+.....+.-|+.+.+|+ +..++..
T Consensus 298 i~~iRi~~~~~~~---------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~------rlsAt~y 350 (412)
T PF01306_consen 298 IMAIRIIGSGFAT---------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDK------RLSATLY 350 (412)
T ss_dssp HHHHHHHHHHT-----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-G------GGHHHHH
T ss_pred HHHHHHHHHhhhc---------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------hHHHHHH
Confidence 9999988889887 788899999999999999999999999999986 3445666
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhh
Q 045410 185 NW-WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGY 233 (589)
Q Consensus 185 ~~-~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 233 (589)
.+ +..+..+|.++.+.++|.+-|++|++-.|++.+.++++..++..+..
T Consensus 351 ~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 351 LVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 66 45678899999999999999999999899887766655555444443
No 213
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.64 E-value=4.3e-05 Score=80.75 Aligned_cols=103 Identities=13% Similarity=0.050 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 045410 70 VVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLAL 149 (589)
Q Consensus 70 ~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 149 (589)
-.++.+....+..++++.+.|+ +|.|..++++...+.+-.+.+.+- |.+.++.+-++
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~----------------------N~y~~yfssal 111 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP----------------------NSYYLYFSSAL 111 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc----------------------chHHHHHHHHH
Confidence 3788888999999999999999 599999999999888877666653 44678888899
Q ss_pred HHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 045410 150 LAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTA 201 (589)
Q Consensus 150 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 201 (589)
.|+|.+....-...++.|..++ +.+.+-.++.+.....+.++|.+.
T Consensus 112 lG~Gaallw~GqG~ylt~~st~------~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 112 LGFGAALLWTGQGGYLTSNSTR------ETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hhhhHHheecccceehhhcCCh------hhHHHHHHHHHHHHHHHHHhhhHh
Confidence 9999998888888888886554 234444555545555566555443
No 214
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.61 E-value=7.1e-07 Score=89.22 Aligned_cols=143 Identities=8% Similarity=-0.054 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHh-----------------c---CCchhHHHHHHHHHHHHHHhhhhhhhHHhh
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTK-----------------Y---NMDGILLVNVVSIWGGSSSLTAIPGALLSD 90 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----------------l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laD 90 (589)
.+.+-.+-|...++||++.-..+...+.. . ..+....-. .-+..+.-.-+.++.+++.|
T Consensus 328 tlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd-llitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 328 TLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD-LLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH-HHHHHHhhCCchhHHHHHHH
Confidence 34455688889999999876554433211 0 112222222 23345567788999999999
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCC
Q 045410 91 TYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFD 170 (589)
Q Consensus 91 r~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 170 (589)
| +|||+.+..+.+++++..+.+....+- .....++..+|++... .+.+.+.|-.|.||
T Consensus 407 r-lGRKkTMal~l~~f~iflfll~~c~~r-----------------n~~tvllf~arafisg----~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 407 R-LGRKKTMALSLILFGIFLFLLTTCKTR-----------------NAYTVLLFTARAFISG----AFQVAYVYTPEVYP 464 (528)
T ss_pred H-hcchhHHHHHHHHHHHHHHHHHHhcCc-----------------chhHHHHHHHHHHHhc----hheEEEEecCcccc
Confidence 9 699999999999999988888776511 1123455666666544 44566889999999
Q ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 045410 171 TTTPKGKSQLESFFNWWYFSFTVALVVALTAV 202 (589)
Q Consensus 171 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 202 (589)
+ ..|+.+.+....+..+|+++.|.++
T Consensus 465 T------avRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 465 T------AVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred h------hhhhcchhhhhhHHhhhhhhhhHHH
Confidence 8 5688888888888999999999887
No 215
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.60 E-value=3.5e-06 Score=88.51 Aligned_cols=138 Identities=12% Similarity=0.191 Sum_probs=101.1
Q ss_pred cccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhH
Q 045410 377 GWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISIL 456 (589)
Q Consensus 377 ~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (589)
+.+..++-.+-++.-++..+ +.+|++ +.+.+..|+.+.++=++.+.+++ ++|
T Consensus 409 Gv~~a~~~~gEI~~~ffs~k----lI~kiG-------Hv~v~~lgLa~~~~Rf~~~S~L~-----------------n~W 460 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFK----LIEKIG-------HVNVMYLGLACNVGRFLYYSYLQ-----------------NPW 460 (618)
T ss_pred eehhhhhccchHHHHHHHHH----HHHHhc-------ccceeeehhhHHHHHHHHHHHhc-----------------Cch
Confidence 34444554454555455444 477764 34478888888888888888875 677
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHH-HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcc
Q 045410 457 VLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSL-SISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKD 535 (589)
Q Consensus 457 ~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~-~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~ 535 (589)
.+++.-++.++-......+.-+|+...+|++.|.+++++..... ++|-.+|..++|.+....+
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg---------------- 524 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG---------------- 524 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh----------------
Confidence 88889999999999999999999999999999999999886555 7888888888887765321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Q 045410 536 TLDYFYFTIAALEVVNLLYFNFFA 559 (589)
Q Consensus 536 ~~~~~f~~~a~~~~~~~~~~~~~~ 559 (589)
....|..+++.+++.++++..+-
T Consensus 525 -~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 525 -ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhh
Confidence 12456666666666666665553
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.55 E-value=5.4e-06 Score=87.53 Aligned_cols=158 Identities=8% Similarity=0.002 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGM 110 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~ 110 (589)
+...+...++...+.-....+...|+++.-|.+....+.+.++..+.-.....+.+++..| +|.|++++++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence 3333344455555545556788889875544888888888888888888889999999999 599999999999988877
Q ss_pred HHHHHh-hcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH
Q 045410 111 GIMTLT-ASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF 189 (589)
Q Consensus 111 ~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 189 (589)
.+++.. ++.+ ......+.+.+++|+..+....+...++.+..|++ .|+++-++++.
T Consensus 288 ~l~a~~~~~~~-----------------~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~------~~at~Q~l~~~ 344 (400)
T PF03825_consen 288 LLYAYFSDPWP-----------------FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE------LRATAQGLYSA 344 (400)
T ss_pred HHHHHhcCCcH-----------------HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc------chHHHHHHHHH
Confidence 777775 3100 01122333456799999999999999999999973 46677777665
Q ss_pred H-HHHHHHHHHHHHHHHHhhcchh
Q 045410 190 S-FTVALVVALTAVVYIQTNVSWI 212 (589)
Q Consensus 190 ~-~~~g~~~~~~~~~~l~~~~g~~ 212 (589)
. ..+|..+|..++|++.+++|-+
T Consensus 345 ~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 345 LSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcch
Confidence 4 5689999999999999987644
No 217
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.53 E-value=7.8e-07 Score=92.77 Aligned_cols=139 Identities=15% Similarity=0.114 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGM 110 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~ 110 (589)
.+......++.....+++..+++.|+++.+|+++.+.+.+.++..+...++.+++|+++|| +|||+.+..+.++..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHH
Confidence 3444445555556667788889999999999999999999999999999999999999999 599998888877777766
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHH
Q 045410 111 GIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFS 190 (589)
Q Consensus 111 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 190 (589)
.++.+....+ .+.+.++....+.+++.|...+...++.++.+|. .+++.+++.+..
T Consensus 306 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~ 361 (366)
T TIGR00886 306 FLVVLGLVSP-----------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-------ATGAVSGLVGAI 361 (366)
T ss_pred HHHHhcCCCc-----------------chHHHHHHHHHHHHHHhccccchhhhcchhhchh-------hcccHHHHHHHh
Confidence 6665533100 0344455555666666777777788888888763 355677776665
Q ss_pred HHHH
Q 045410 191 FTVA 194 (589)
Q Consensus 191 ~~~g 194 (589)
.++|
T Consensus 362 ~~~g 365 (366)
T TIGR00886 362 GNLG 365 (366)
T ss_pred ccCC
Confidence 5554
No 218
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.50 E-value=4.7e-06 Score=73.27 Aligned_cols=132 Identities=15% Similarity=0.252 Sum_probs=93.1
Q ss_pred hHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHH
Q 045410 383 SMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQF 462 (589)
Q Consensus 383 ~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 462 (589)
..++.++..++.+++ .||.++| +.+..+..+..++.+...... +.+......
T Consensus 7 ~~~~~~~~~~~~g~~----~d~~g~~-------~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~ 58 (141)
T TIGR00880 7 YALGQLIYSPLSGLL----TDRFGRK-------PVLLVGLFIFVLSTAMFALSS-----------------NITVLIIAR 58 (141)
T ss_pred ehhHHHHHHhhHHHH----Hhhcchh-------HHHHHHHHHHHHHHHHHHHhc-----------------cHHHHHHHH
Confidence 344555666665555 5665443 356667667776666555432 344555667
Q ss_pred HHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHH
Q 045410 463 SFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYF 542 (589)
Q Consensus 463 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~ 542 (589)
.+.+++.+...+..+.+..|..|++.|+++.++.++...++..+++.+.+.+.+.. + +.+.|.
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~-----------~~~~~~ 121 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------G-----------WRAPFL 121 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------c-----------hHHHHH
Confidence 88888888888999999999999999999999999999999999999998876421 1 234566
Q ss_pred HHHHHHHHHHHHHHHHh
Q 045410 543 TIAALEVVNLLYFNFFA 559 (589)
Q Consensus 543 ~~a~~~~~~~~~~~~~~ 559 (589)
+.+.+.++..+..++..
T Consensus 122 ~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 122 FLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 66666666665555443
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.45 E-value=1.3e-05 Score=84.64 Aligned_cols=138 Identities=10% Similarity=-0.010 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 48 LIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
.....+.|+.+.+|.+..+.+++......+..++.++.+++.||+ ||+... +.+...++.+.........
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~------- 295 (394)
T PRK11652 226 FEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG------- 295 (394)
T ss_pred HHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc-------
Confidence 344556788877999999999998888888888999999999995 743332 2222222222221111000
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
..+.+.+..+.++.+++.+...|...++..|.+|+ .++...++++...++|..+++.+++.+.+
T Consensus 296 ---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 296 ---------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-------LAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------cchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 01345677778889999999999999999998763 24566778877889999999988888766
Q ss_pred hcch
Q 045410 208 NVSW 211 (589)
Q Consensus 208 ~~g~ 211 (589)
...+
T Consensus 360 ~~~~ 363 (394)
T PRK11652 360 TGQF 363 (394)
T ss_pred CchH
Confidence 5333
No 220
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.44 E-value=1.3e-05 Score=85.39 Aligned_cols=138 Identities=10% Similarity=0.066 Sum_probs=97.9
Q ss_pred chhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHH
Q 045410 380 GLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLV 459 (589)
Q Consensus 380 ~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 459 (589)
..+..++..++.+..+. +.||+++| +.+..+.++.+++.++..+.+ +.+.++
T Consensus 57 ~s~~~~~~~~~~~~~G~----l~dr~Grr-------~~l~~~~~~~~~~~~~~~~a~-----------------~~~~l~ 108 (413)
T PRK15403 57 VSLYLAGGMALQWLLGP----LSDRIGRR-------PVLITGALIFTLACAATLFTT-----------------SMTQFL 108 (413)
T ss_pred HHHHHHHHHHHHHhhhH----HHHHcCch-------HHHHHHHHHHHHHHHHHHHcC-----------------CHHHHH
Confidence 33444455555555444 47777665 367778888888777776542 555667
Q ss_pred HHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHH
Q 045410 460 PQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDY 539 (589)
Q Consensus 460 ~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~ 539 (589)
...++.|++.+...+..+.+..|.+|++.+++++++.+....++..+++.+++.+.+.. + ..+
T Consensus 109 ~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------g-----------w~~ 171 (413)
T PRK15403 109 IARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------H-----------WKV 171 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------C-----------HHH
Confidence 77888899887767777788889999999999999999999999999998888765421 2 345
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc
Q 045410 540 FYFTIAALEVVNLLYFNFFACRF 562 (589)
Q Consensus 540 ~f~~~a~~~~~~~~~~~~~~~~~ 562 (589)
.|++.+++.++..++.++..++.
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC
Confidence 67777777676665545444554
No 221
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.44 E-value=6.5e-06 Score=89.35 Aligned_cols=187 Identities=7% Similarity=-0.043 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhH----HHHHHHHHHHHHHhhhhhhh----HHhhhcccchHHH--
Q 045410 30 SIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGIL----LVNVVSIWGGSSSLTAIPGA----LLSDTYLGRFRTL-- 99 (589)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~----~~~~~~~~~~~~~~~~~~~G----~laDr~~Grr~~l-- 99 (589)
....++....+....+.-..+.++.|..++.+.+... .+++.++-.+...+.+++.. ++.||..+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 3343444555555666666677888887665544222 66777777777777777755 4555421334444
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchh
Q 045410 100 LYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQ 179 (589)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 179 (589)
.+|.++.+++...++++..... + ....+++++++..++.++|+....|...+++.+..|+ +.
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~--~----------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~------~~ 414 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFAD--A----------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ------RL 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC--C----------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH------HH
Confidence 6788888888877765421100 0 0123788899999999999999999999999999987 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 180 LESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
|++.+++++....+|..+++.+.....+..+|...|...++..++..+++++..|
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999888877766667777776666655555555544444
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.1e-05 Score=85.21 Aligned_cols=164 Identities=16% Similarity=0.119 Sum_probs=123.1
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.|++...+...++...++.-..+.+..|.+-.+|.++...............++.++..++++| +|+|+++.++.++.+
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~ 313 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLA 313 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHH
Confidence 3444444444555555544444555566665688888888888888888888999999999999 599999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCc-chhhhhHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKG-KSQLESFFNW 186 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~ 186 (589)
++.+++.+.. ..+.+++++..++.++|.+...+..+++++|..+.++-+. .+.-+..++.
T Consensus 314 i~~~~~~f~~-------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~ 374 (467)
T COG2211 314 VGYLLLYFTP-------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSG 374 (467)
T ss_pred HHHHHHHhhc-------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHH
Confidence 9999999865 1267788888899999999999999999999887543322 1122344555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcch
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
+.+..=+|..++..+.|++....|+
T Consensus 375 ~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 375 MTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6667778888888888888765554
No 223
>PRK11462 putative transporter; Provisional
Probab=98.43 E-value=1.3e-05 Score=86.76 Aligned_cols=162 Identities=10% Similarity=0.031 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
|.+..++...++..+...........|.+-.+|. +...+.+...+.+...++.+++++++|| +|+|+++..+.++..+
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAV 305 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHH
Confidence 3333333334444444333333333333222443 3445567777888888999999999999 5999988766555444
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCC-cchhhhhHHHHH
Q 045410 109 GMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPK-GKSQLESFFNWW 187 (589)
Q Consensus 109 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~ 187 (589)
...+..+.. . .+...+++..++.|++.+...+...++++|..+.++-+ +++.-+..++.+
T Consensus 306 ~~~~~~~~~---~----------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~ 366 (460)
T PRK11462 306 ISLAMFFVP---M----------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGT 366 (460)
T ss_pred HHHHHHHhc---h----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHH
Confidence 444333322 1 12233444455667777777777788899877644221 122233445667
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcch
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
.+...+|..+++.++|++.+..|+
T Consensus 367 ~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 367 LFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 778899999999998888765554
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.40 E-value=9.9e-06 Score=82.65 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=121.9
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASF 107 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~ 107 (589)
.|....-.+..|+.--.=-.+-++++.|+.+..|++..+.....+.+..+.+++..++-++-.| +...|.+.+..+...
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~i 313 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAI 313 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 3444444455666555555667889999998899999999999999999999999999999999 599999998887766
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWW 187 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 187 (589)
+-++..++.. + ..-+.+.++.|+..+.++|.+.++..+..|++.+.. +..
T Consensus 314 ll~~~~~l~~---------------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~--------s~~ 363 (422)
T COG0738 314 LLLLAVALIG---------------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVG--------SGL 363 (422)
T ss_pred HHHHHHHHhc---------------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccccc--------cee
Confidence 6666666655 2 223444577899999999999999999998653221 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHhHH
Q 045410 188 YFSFTVALVVALTAVVYIQTNVSWILGFA 216 (589)
Q Consensus 188 ~~~~~~g~~~~~~~~~~l~~~~g~~~~f~ 216 (589)
-.+..+|+.+.|.+-|++.|..|-...+.
T Consensus 364 l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 364 LVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 22456788899999999999998777665
No 225
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.40 E-value=3.3e-05 Score=74.09 Aligned_cols=151 Identities=20% Similarity=0.169 Sum_probs=93.4
Q ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 045410 54 VYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCP 133 (589)
Q Consensus 54 ~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 133 (589)
.|+-+++|+...+++.+.-......+++..+.|-|+|+ -||||..+..++ .+.++....-.|
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtyci----tYiLsCiTKhSp------------- 122 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCI----TYILSCITKHSP------------- 122 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehH----HHHHHHHhhcCC-------------
Confidence 45667899999999999888888888999999999999 599998665554 444444443222
Q ss_pred CCCchhHHHHHHHHHHHHHhhccccccHHHH-hhccCCCCCCCcc-hhh-hhHHHH-HHHHHHHHHHHHHHHHHHHHhhc
Q 045410 134 QPEGWQLSILYAGLALLAIGSGGIRPCNIAF-GADQFDTTTPKGK-SQL-ESFFNW-WYFSFTVALVVALTAVVYIQTNV 209 (589)
Q Consensus 134 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~-~~r-~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~ 209 (589)
++-.++++|++-|++.+..++..-+. ++|-.. +++- .+- ..-++= ....+.+-++++...+..+.+.+
T Consensus 123 -----qYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne---kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~ 194 (454)
T KOG4332|consen 123 -----QYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE---KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF 194 (454)
T ss_pred -----ceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh---ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 45568999999999988877665553 333221 1111 110 000111 11123334445555556666655
Q ss_pred c--hhHhHHHHHHHHHHHHHHHH
Q 045410 210 S--WILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 210 g--~~~~f~~~~~~~~i~~~~~~ 230 (589)
+ .-.+|-.++++..++..+.+
T Consensus 195 slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 195 SLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred ccCCCCchHHHHHHHHHHHHHHH
Confidence 4 55677766666665555443
No 226
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.39 E-value=1.6e-05 Score=77.69 Aligned_cols=159 Identities=14% Similarity=0.176 Sum_probs=104.8
Q ss_pred HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045410 49 IANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCT 128 (589)
Q Consensus 49 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 128 (589)
.+...+.+++.+|+|.+|...+.....++..++ ++.|.+.|++ |.|.++.+|.+...+|+.++.++.+ ..+
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~-~~i------ 91 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS-GRI------ 91 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh-Ccc------
Confidence 455677888999999999999999999999875 8889999995 9999999999999999999887641 110
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHH-HHHHHHHHHHHHHh
Q 045410 129 GAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTV-ALVVALTAVVYIQT 207 (589)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~ 207 (589)
.....|.+.+...+.+.+.+.+.........+.||.+ |++..++.-....+ |+++..+...+..+
T Consensus 92 -------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 92 -------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred -------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 0124566666666777777777677777777899853 44455552222222 33344333333333
Q ss_pred hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 208 NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+ .-...+.++.....++++..++
T Consensus 158 ~-~~~fll~la~~~~~v~l~~~~~ 180 (250)
T PF06813_consen 158 D-PSSFLLFLAVLPAVVCLVAMFF 180 (250)
T ss_pred C-hHHHHHHHHHHHHHHHHHHhhh
Confidence 1 2233444444444444444444
No 227
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.34 E-value=9.6e-06 Score=86.99 Aligned_cols=177 Identities=15% Similarity=0.098 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccc-------hHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGR-------FRTLLY 101 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-------r~~l~~ 101 (589)
+.+|.+....+++..+++.+..++|.|+.+.+|++..+.|++.++..+...+..+++|.++||. -+ ++-+.-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHH
Confidence 3557788899999999999999999999999999999999999999999999999999999995 43 111111
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhh
Q 045410 102 GSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEG-WQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQL 180 (589)
Q Consensus 102 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 180 (589)
+......+..+..++. ++.. +. .....+.++..+.|+..++. ..-..|..|. --
T Consensus 337 ~i~~~~~ai~l~~l~~-~~~~-------------~~~~a~~~l~~~~~~~g~~~~Gf----~~~~~~~apq-------~a 391 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAF-TSDE-------------HRLLAVILLTIAIGLSGFNISGF----YKNHQDIAPQ-------HA 391 (466)
T ss_pred hHHHHHHHHHHHeeee-cCCC-------------cchHHHHHHHHHHHHcccchhhh----Hhhhhhccch-------HH
Confidence 1122222222222221 2210 00 01111111112222222221 1212222332 24
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhh---cchhHhHHHHHHHHHHHHHHHHH
Q 045410 181 ESFFNWWYFSFTVALVVALTAVVYIQTN---VSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 181 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
+..+++.+...++.++++|.+.+.+.++ -.|+..|++.+++.++..+++.+
T Consensus 392 ~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 392 GFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 4678888889999999999999999842 36999999988877777655443
No 228
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.32 E-value=6.7e-07 Score=92.37 Aligned_cols=145 Identities=16% Similarity=0.292 Sum_probs=113.8
Q ss_pred ccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchh
Q 045410 376 PGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISI 455 (589)
Q Consensus 376 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (589)
.+.++.+-.+...++.|+++.+ .+|+.|| ..+.+|.++-.++.+..++.. +.
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyL----adryNR~-------~v~~vG~~iW~~Av~~~~fs~-----------------~F 121 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYL----ADRYNRK-------RVIAVGIFIWTLAVFASGFSN-----------------HF 121 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHH----HhhcCcc-------eEEeeHHHHHHHHHHHHHHHH-----------------HH
Confidence 3445555666677788888887 6666444 378999999999999888864 67
Q ss_pred HHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcc
Q 045410 456 LVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKD 535 (589)
Q Consensus 456 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~ 535 (589)
|.+.+.-.+.|+|+....|..+.++.+.+|++.|+++.++++++...|+.+|...+..+.+.+. .|
T Consensus 122 wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~W--------- 187 (493)
T KOG1330|consen 122 WQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WW--------- 187 (493)
T ss_pred HHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ce---------
Confidence 7778889999999999999999999999999999999999999999998888777666654331 13
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 045410 536 TLDYFYFTIAALEVVNLLYFNFFACRFVS 564 (589)
Q Consensus 536 ~~~~~f~~~a~~~~~~~~~~~~~~~~~~~ 564 (589)
.+.|...+++.++..++..++.++..+
T Consensus 188 --r~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 188 --RWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred --EEEEEeehHHHHHHHHHHHhhccCccc
Confidence 245677788888888877777666543
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.31 E-value=2.7e-05 Score=80.13 Aligned_cols=169 Identities=17% Similarity=0.215 Sum_probs=132.9
Q ss_pred HHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHh
Q 045410 37 NETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLT 116 (589)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~ 116 (589)
..++..++++.-=..+-+|--+.||++..|.+-+......+..++....|++..|..++++.-.+++....++.....++
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 44444455444446667787888999999999999999999999999999998865799999999999888888877776
Q ss_pred hcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHH
Q 045410 117 ASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALV 196 (589)
Q Consensus 117 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 196 (589)
... .+.+.+..+.+++|++.|.+.....+.+-|+..+++ -+..++.|.....++..
T Consensus 296 ~~~------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~G 351 (403)
T PF03209_consen 296 GPL------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARG 351 (403)
T ss_pred Hhc------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHH
Confidence 522 257889999999999999999999999999887632 44678999999999999
Q ss_pred HHHHHHHHHHhh----------cchhHhHHHHHHHHHHHHHHH
Q 045410 197 VALTAVVYIQTN----------VSWILGFAIPTGCFFLSIVVF 229 (589)
Q Consensus 197 ~~~~~~~~l~~~----------~g~~~~f~~~~~~~~i~~~~~ 229 (589)
+|..++|.+.|- .+|..+|.+.+++.++++.+.
T Consensus 352 lg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 352 LGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999888888763 245666777666655555443
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.31 E-value=4.3e-05 Score=76.12 Aligned_cols=146 Identities=17% Similarity=0.263 Sum_probs=110.0
Q ss_pred HHHHHHHHHhcCCch--hHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDG--ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
..++.+. .+++.+. .+.+++.+.+.+...++.++.|+++||+ |||+.+..+.....++.+.+.+..+
T Consensus 23 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 3344443 3455555 5899999999999999999999999995 9999988888776666666666551
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF-SFTVALVVALTAVVYIQ 206 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~ 206 (589)
.+.+.+++.|+..|++.+...+...+++.|.+|+ . ..|+...+.... ...+|..+++.+++.+.
T Consensus 92 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 92 ----------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred ----------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1467889999999999999999999999999885 1 346667777666 57788888887777766
Q ss_pred hh--cchhHhHHHHHHH
Q 045410 207 TN--VSWILGFAIPTGC 221 (589)
Q Consensus 207 ~~--~g~~~~f~~~~~~ 221 (589)
.. .+|+..|.+....
T Consensus 157 ~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 157 GALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHhcchHHHHHHHHHH
Confidence 54 5688855554443
No 231
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.30 E-value=0.0016 Score=67.97 Aligned_cols=153 Identities=12% Similarity=0.123 Sum_probs=104.7
Q ss_pred HHHHHHHHHh-cCCchhHHHH-HHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 50 ANMTVYLRTK-YNMDGILLVN-VVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 50 ~~l~~yl~~~-lg~s~~~~~~-~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
+++.+|+.+. .|++..|... +.-+..-.+....++...++|. +|.|++++++.+...+...++.+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 6788999887 8999998874 4445555666778889999999 5999999999999888888888877
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+...+-+..+..|++.+. ..+..+++-...|+++ -.+..+....+.-+|-.++..++-.+..
T Consensus 93 -----------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 -----------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred -----------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677888888888766 3444555555555422 2234555555666666666655544443
Q ss_pred --hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 208 --NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 208 --~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
..++....++......++++..++
T Consensus 155 ~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 155 FGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 234566666666555555554444
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.22 E-value=3.2e-06 Score=85.74 Aligned_cols=160 Identities=14% Similarity=0.060 Sum_probs=122.3
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhccc--chHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLG--RFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC 127 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 127 (589)
+.++++..+....+..+.|...--..+.+.++..+.|.++||+ + |...-..+.+...+.+....++.
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP~~~---------- 359 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIPFAT---------- 359 (464)
T ss_pred cccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhHhhh----------
Confidence 5577888888887777999998889999999999999999996 9 54444444444444444444544
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 128 TGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+...+++-++..+++.+...+...+.++.+.+....++.+..++.+++...+..+|..+||.++|.+.+
T Consensus 360 -----------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~ 428 (464)
T KOG3764|consen 360 -----------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE 428 (464)
T ss_pred -----------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee
Confidence 556688888888899998888888888888875444433467888899999999999999999999999
Q ss_pred hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 208 NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 208 ~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
.+|++|.-.+.+..-++..-++..
T Consensus 429 ~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 429 AIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998777666655544433333
No 233
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.19 E-value=0.0011 Score=69.09 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 454 SILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNII 514 (589)
Q Consensus 454 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 514 (589)
+.|.+++.+...|+-.+..+...+..+.+..|++.|-.++|.......+|..+++.++-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4555666777788888888888888889999999999999998888888888887766444
No 234
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.18 E-value=0.016 Score=62.11 Aligned_cols=168 Identities=8% Similarity=0.010 Sum_probs=104.9
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCc-----hhHHHHHHHHHHHHHHhh-hhhhhHHhhhcccchHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMD-----GILLVNVVSIWGGSSSLT-AIPGALLSDTYLGRFRTLL 100 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-----~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~~l~ 100 (589)
-+|.++.....-|+-.+.||.+.+ +.|.++++ .....++-+...+-..+. .++-+++++|+ +|++.+-
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~ 78 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFY 78 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHH
Confidence 456667677788888888776665 67777663 356777777665655555 88899999995 9999998
Q ss_pred HHHHHHHHHHHHHHHhh-cCCC-CCCCCCCCC-C---CCCCCc----hhHHHHHHHHHHHHHhhccccc-cHHHHhhccC
Q 045410 101 YGSIASFLGMGIMTLTA-SIPK-LRPPDCTGA-Q---CPQPEG----WQLSILYAGLALLAIGSGGIRP-CNIAFGADQF 169 (589)
Q Consensus 101 ~~~~~~~~~~~~~~~~~-s~~~-~~~~~~~~~-~---~~~~~~----~~~~~~~~~~~l~g~g~g~~~~-~~~~~~~~~~ 169 (589)
+....+....+++++.- ..++ +.++...++ . +.+-.. .+.|..-+.-+...+-.....+ ..++++.|.+
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88887777777666542 0111 111100000 0 000000 0112111222223333334444 6789999998
Q ss_pred CCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 170 DTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQ 206 (589)
Q Consensus 170 ~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 206 (589)
..+ +-.|.+++++.+.|+|.++++.+..++.
T Consensus 159 t~~------qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 159 TID------EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 763 3446899999999999999998888876
No 235
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.13 E-value=5.4e-05 Score=82.38 Aligned_cols=101 Identities=16% Similarity=0.241 Sum_probs=76.9
Q ss_pred HHHHhhhhHHHHhhhh-hcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHH
Q 045410 389 TWIFFYERVFVPLSQK-MTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGL 467 (589)
Q Consensus 389 ~~~~l~~~~~~~~~~k-~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~ 467 (589)
...++.+++ .|| +++| +.+.+|.++..++.+.+++.. . ....++....+.++
T Consensus 65 ~~~~~~G~l----aDr~~G~r-------~~~~~g~~~~~~g~~~~~~~~---------------~-~~~ll~~~~~l~~i 117 (489)
T PRK10207 65 GLISIGGYV----GDHLLGTK-------RTIVLGAIVLAIGYFMTGMSL---------------L-KPDLIFIALGTIAV 117 (489)
T ss_pred HHHhhHHHh----hhhccchH-------HHHHHHHHHHHHHHHHHHHhc---------------c-chhHHHHHHHHHHh
Confidence 334454554 666 5444 488999999999988887643 1 12223456778899
Q ss_pred HHHhHhhhHHHHHhhccCch--hhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045410 468 TEGFAAVAVMEFLTTQLPES--MRTVSGAVFFLSLSISSYINSALVNIIHG 516 (589)
Q Consensus 468 g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 516 (589)
|.++..|...+++.|.+|++ .|+.+.+.+.+..++|..+++.+.|.+.+
T Consensus 118 g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 118 GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887 45788999999999999999999998864
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.09 E-value=2.1e-05 Score=62.06 Aligned_cols=69 Identities=19% Similarity=0.177 Sum_probs=58.5
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIAS 106 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~ 106 (589)
...|+...+...+.++++.|+. +.|+|..|+|.+.++..+...+++++.|+++||+ ||++.++....++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 3455555666667788899987 5999999999999999999999999999999995 9999888776654
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.08 E-value=0.00018 Score=77.43 Aligned_cols=202 Identities=13% Similarity=-0.009 Sum_probs=138.7
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHh-cCCchh------H----HHHHHHHHHHHHHhhhhhhhHHhhhcccc
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTK-YNMDGI------L----LVNVVSIWGGSSSLTAIPGALLSDTYLGR 95 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~s~~------~----~~~~~~~~~~~~~~~~~~~G~laDr~~Gr 95 (589)
-+|.++.+..++|+.+++++.+..+.+.|..++ ++-++. + ..+....+.+...+..++--++.+| +|+
T Consensus 256 mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~-~g~ 334 (477)
T TIGR01301 256 LPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG-WGA 334 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 367778888999999999999999999998753 443221 1 1233344444445666777888999 595
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCC-CCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCC
Q 045410 96 -FRTLLYGSIASFLGMGIMTLTASIPK-LRPPDCTGAQCP-QPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTT 172 (589)
Q Consensus 96 -r~~l~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 172 (589)
|++..++.++..++.....+..+.++ ..+ .++++.+ .......+..++...+.|+..+....+-++++++..+++
T Consensus 335 ~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 335 GKRLWGIVNIILAICLAATVLVTYVAKNSRY--YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhcccc--ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 67778898888888888876543221 000 0011111 111122466777778899999999999999999988742
Q ss_pred CCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc--hhHhHHHHHHHHHHHHHHHHHhhcc
Q 045410 173 TPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS--WILGFAIPTGCFFLSIVVFLIGYHT 235 (589)
Q Consensus 173 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (589)
. ++.+..+++++.++.+..++..+..|.+.+..| -.+.+.++++..+++.+..++..|+
T Consensus 413 ~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 413 G----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred C----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 345678999999999999999988888666554 3457777888777777766666554
No 238
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.08 E-value=0.00018 Score=78.64 Aligned_cols=180 Identities=13% Similarity=0.019 Sum_probs=114.0
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHH--hcCCch------hHHHHHHHHHHHHHHhhhhhh----hHHhhhcccchHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRT--KYNMDG------ILLVNVVSIWGGSSSLTAIPG----ALLSDTYLGRFRTLLYGS 103 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~------~~~~~~~~~~~~~~~~~~~~~----G~laDr~~Grr~~l~~~~ 103 (589)
+..+.....+|.+..-++.++.. ..+.+. ...+++.++-.+...+..++. +++.|| ++.++.+.+|.
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~ 357 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHH
Confidence 34445555566666555555442 111111 124555555555555565555 666777 47778899999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 104 IASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 104 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
++..++.+.++++...+.- ....+.+++++..+++++|+++..|+..+++.+..|+ +.|++.
T Consensus 358 ~l~~l~f~~l~~~~~~~~~------------~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~------~~rg~~ 419 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFAND------------AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQ------RLMGFI 419 (500)
T ss_pred HHHHHHHHHHHHHHHhcCC------------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH------HHHHHH
Confidence 9999999888876532210 0112566788899999999999999999999999987 568889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----------hcchhHhHHHHHHHHHHHHHHHHHhhc
Q 045410 184 FNWWYFSFTVALVVALTAVVYIQT----------NVSWILGFAIPTGCFFLSIVVFLIGYH 234 (589)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~~~~l~~----------~~g~~~~f~~~~~~~~i~~~~~~~~~~ 234 (589)
++.+.....+|+.++..+.+.... ..++...|...++..++..++++...+
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998887777777777665543221 112556665555444433333344333
No 239
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.03 E-value=0.00017 Score=77.96 Aligned_cols=129 Identities=12% Similarity=0.045 Sum_probs=83.9
Q ss_pred HHHHHHHhhhhHHHHhhhhh-cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHH
Q 045410 386 TLSTWIFFYERVFVPLSQKM-TGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSF 464 (589)
Q Consensus 386 ~~~~~~~l~~~~~~~~~~k~-~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 464 (589)
...+..++.+++ .||+ ++| +.+.+|.+++.++.++++... . +...+.....+
T Consensus 57 ~~~l~~ligG~L----aDRilGrr-------r~iliG~il~~lg~lll~~~~---------------~-~~~~~~l~l~l 109 (493)
T PRK15462 57 LVYVTPILGGFL----ADKVLGNR-------MAVMLGALLMAIGHVVLGASE---------------I-HPSFLYLSLAI 109 (493)
T ss_pred HHHHHHHHHHHH----HHHccCcH-------HHHHHHHHHHHHHHHHHHHhh---------------c-chhHHHHHHHH
Confidence 333444454555 6665 443 367888888888876554321 0 11123334445
Q ss_pred HHHHHHhHhhhHHHHHhhccCch--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHH
Q 045410 465 SGLTEGFAAVAVMEFLTTQLPES--MRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYF 542 (589)
Q Consensus 465 ~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~ 542 (589)
..+|.++..+...+++.|.+|++ .|.++.+++++..++|+.+++.+.+.+.+.. + +.+.|.
T Consensus 110 i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------G-----------w~~~F~ 172 (493)
T PRK15462 110 IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------S-----------WAMGFG 172 (493)
T ss_pred HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------C-----------hHHHHH
Confidence 55666666777788999999976 7999999999999999999999999886422 2 345676
Q ss_pred HHHHHHHHHHHHHHHH
Q 045410 543 TIAALEVVNLLYFNFF 558 (589)
Q Consensus 543 ~~a~~~~~~~~~~~~~ 558 (589)
+.++..+++++.++..
T Consensus 173 iaaigm~l~li~~~~~ 188 (493)
T PRK15462 173 LAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6655555555554443
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=98.02 E-value=0.00035 Score=76.86 Aligned_cols=125 Identities=11% Similarity=0.044 Sum_probs=87.2
Q ss_pred HHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHH
Q 045410 399 VPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVME 478 (589)
Q Consensus 399 ~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~ 478 (589)
.++.+|+++| +.+.+|.++..++.++.++... .....+.+.+.+...+.|+|.++..+....
T Consensus 82 G~L~Dr~G~R-------~vllig~ll~~iG~ll~ala~~-----------~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~ 143 (591)
T PTZ00207 82 SFIYDYLGPR-------PIFVLSMTVFCLGTLLFALTFQ-----------EVIEGSVVRLSVYNGLMTLGCMLFDLGAVV 143 (591)
T ss_pred HHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHhc-----------ccccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4447776544 4888999999999988887521 000135666677788899999888888888
Q ss_pred HHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 045410 479 FLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFF 558 (589)
Q Consensus 479 ~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~ 558 (589)
...+.+| +.||.+.|+..+...+|+++.+.+...+... + ...+|++.+++.++..++.+.+
T Consensus 144 ~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-------~-----------~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 144 TVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-------N-----------TSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h-----------HHHHHHHHHHHHHHHHHHHHhh
Confidence 8888887 6699999999999999998755555433320 1 2345666666666665555555
Q ss_pred hc
Q 045410 559 AC 560 (589)
Q Consensus 559 ~~ 560 (589)
.+
T Consensus 205 vr 206 (591)
T PTZ00207 205 MR 206 (591)
T ss_pred ee
Confidence 43
No 241
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.00039 Score=72.17 Aligned_cols=170 Identities=15% Similarity=0.059 Sum_probs=117.5
Q ss_pred CCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchHHHHHH
Q 045410 26 GGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFRTLLYG 102 (589)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l~~~ 102 (589)
++.+.++.+..+.+...+++-.=.+++++|+. .+|++.+-.+.+-...-+...+.+|+.|..+||. +||||.++..
T Consensus 29 s~~~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~ 107 (498)
T KOG0637|consen 29 SRLRKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILA 107 (498)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHH
Confidence 34366666667777777776666788888885 8999999999888888889999999999999975 7999988877
Q ss_pred HHH-HHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhh
Q 045410 103 SIA-SFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLE 181 (589)
Q Consensus 103 ~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 181 (589)
..+ ..++.++..++.-+..+..++... + .-.-....++++.-+.=++.-......-++++|+..++++++ |
T Consensus 108 ~s~~i~~~l~Lig~aaDig~~lgd~~~~--~--~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~---~- 179 (498)
T KOG0637|consen 108 GSLLIAVSLFLIGYAADIGLLLGDNERK--P--VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT---R- 179 (498)
T ss_pred hhHHHHHHHhhhhhHhhhhHHhcCCccc--c--cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh---c-
Confidence 554 445555555544222211111000 0 001234556666667777777778888999999987654322 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 182 SFFNWWYFSFTVALVVALTAVVYI 205 (589)
Q Consensus 182 ~~~~~~~~~~~~g~~~~~~~~~~l 205 (589)
+.+++.....+|+++|...++++
T Consensus 180 -Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 180 -ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred -cchhHHHHHHhcceeeeeccccc
Confidence 67777778899999888776643
No 242
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.99 E-value=3.6e-05 Score=83.40 Aligned_cols=136 Identities=7% Similarity=-0.218 Sum_probs=105.2
Q ss_pred HHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCC
Q 045410 57 RTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPE 136 (589)
Q Consensus 57 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 136 (589)
.+.+|+++.+.|.+.....++..++....+++.+| ++.|+++.++.++.+++.....+..+...... .
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~-----------g 347 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAF-----------G 347 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeecccccc-----------C
Confidence 45799999999999999999999999999999999 59999999999988887766542210000000 0
Q ss_pred chhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045410 137 GWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 137 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
..+.+.++..-++.+++.+........++.+..|++ .+++.++++....++|..+++.+++++.+..|
T Consensus 348 i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~------~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 348 ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG------CESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC------ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 002233445567788888888888899999999874 35677899888899999999999999998776
No 243
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.94 E-value=0.043 Score=58.25 Aligned_cols=186 Identities=13% Similarity=0.014 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH----HH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA----SF 107 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~----~~ 107 (589)
+.+...-++.+.+.-..-...+.|+.+-+.-+.--.....-+-.+...++.+..|.+.||. .|.+++..+.+. .+
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHHH
Confidence 3344444444444444445566677655544444444444555567778888899999995 999998877553 22
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH-hhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 108 LGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAI-GSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 108 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~-g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
+.+.++....+.+.... .+....+.+++...+.+. ..=+....-.+.=-|+.+.=..+.+..+++.-+.
T Consensus 84 ~s~~~~~~l~~~~~~~~----------~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~ 153 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSS----------QSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNAT 153 (432)
T ss_pred HHHHHHHHHHhCCcccc----------ccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHH
Confidence 22222222221111000 001112222222222221 1111111111212233221111222344445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHH
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVV 228 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~ 228 (589)
..-.=.+--+++|++.|.+....+......+.+...++++.+
T Consensus 154 mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 154 MRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 444556788999999999998888887766666666666555
No 244
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.93 E-value=5.7e-05 Score=76.40 Aligned_cols=112 Identities=12% Similarity=0.143 Sum_probs=86.9
Q ss_pred ccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchh
Q 045410 376 PGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISI 455 (589)
Q Consensus 376 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (589)
.+.++....+.-.+..+.++.+ .+|+|||+ .+.+|.+..+++.++.+... +.
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~----SD~yGRkp-------vll~c~~~va~s~ll~~~S~-----------------~F 121 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCL----SDRYGRKP-------VLLACLIGVALSYLLWALSR-----------------NF 121 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhh----hhhhCchH-------HHHHHHHHHHHHHHHHHHHH-----------------HH
Confidence 4445555566666777777776 77777664 78888888888888877753 34
Q ss_pred HHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045410 456 LVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHG 516 (589)
Q Consensus 456 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 516 (589)
..++..-++.|+..+-..+. -+++.|.++++.|+.+++..+++.++|..+||.+++.+..
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~-rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVI-RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhhhccCchHHH-HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 34444577888887776665 5899999999999999999999999999999999998764
No 245
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.89 E-value=0.00061 Score=72.16 Aligned_cols=103 Identities=12% Similarity=0.054 Sum_probs=83.1
Q ss_pred HHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHH
Q 045410 384 MLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFS 463 (589)
Q Consensus 384 ~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 463 (589)
..+..+.....+++ .+|++-| +.+.++++..++..++.++.. +...+.+.-+
T Consensus 72 ~ysYal~qIp~GlL----aDrlG~K-------~vL~l~~l~Wsl~t~L~~fa~-----------------Sl~~L~i~R~ 123 (511)
T TIGR00806 72 PYSHLAVLVPVFLL----TDYLRYK-------PVLVLQALSFVCVWLLLLLGT-----------------SVWHMQLMEV 123 (511)
T ss_pred HHHHHHHHHHHHHH----HHHhCch-------HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHH
Confidence 33344444444444 6776444 478888888888888888764 5677888999
Q ss_pred HHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045410 464 FSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIH 515 (589)
Q Consensus 464 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 515 (589)
+.|++++... +...++.+.+|++.|+++.|+++....+|.++++.+++.+.
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 99999999999999999999999999999999999999843
No 246
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.88 E-value=0.00012 Score=82.08 Aligned_cols=131 Identities=10% Similarity=0.019 Sum_probs=93.7
Q ss_pred ccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-hhhhh----------
Q 045410 376 PGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKR-RLSAL---------- 444 (589)
Q Consensus 376 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~-~~~~~---------- 444 (589)
.+++.....++..+..++++.+ .+|.+|| +.+.+|+++++++.+++++..... .+...
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~----~~r~~r~-------~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYF----GTKLHRP-------IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHh----hcccCcc-------eEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 4555666667777777775555 6665444 378889999999999887764110 00000
Q ss_pred ---------c------------cCCCCc--cchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHH
Q 045410 445 ---------Q------------HGSFES--PISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLS 501 (589)
Q Consensus 445 ---------~------------~~~~~~--~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 501 (589)
. .+.... ...+..++++-++.|+|.+...+....++.|.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0 000000 11344566788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 045410 502 ISSYINSALVNIIHGL 517 (589)
Q Consensus 502 lg~~l~~~l~~~i~~~ 517 (589)
+|..+|+.+++.+.+.
T Consensus 219 iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhhHHHHHHHHHHHhc
Confidence 9999999999887653
No 247
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00012 Score=79.02 Aligned_cols=85 Identities=13% Similarity=0.038 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhc---ccchHHHHHHHHHHH
Q 045410 31 IKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTY---LGRFRTLLYGSIASF 107 (589)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~l~~~~~~~~ 107 (589)
+|...+..++.....|++..+++.|+++..|++..+++.+...+.++..++.+++|+++||. +.+|..+.....++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 35566788888889999999999999986779999999999999999999999999999992 156666555555444
Q ss_pred H-HHHHHHH
Q 045410 108 L-GMGIMTL 115 (589)
Q Consensus 108 ~-~~~~~~~ 115 (589)
+ |...+..
T Consensus 355 ~~g~~~l~~ 363 (495)
T KOG2533|consen 355 IIGAISLLA 363 (495)
T ss_pred HHHHHHHHh
Confidence 4 3344333
No 248
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.76 E-value=0.00079 Score=73.91 Aligned_cols=149 Identities=12% Similarity=0.059 Sum_probs=89.3
Q ss_pred CCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 25 KGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
+..+|......++..+..++-+-...+....+.+..|.+... .....+..+...++..++.++.|| +|||+.++.+.+
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHH
Confidence 345666665555555555554444444444455677776544 455555666777777888999999 599999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHH-HHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhH
Q 045410 105 ASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSI-LYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESF 183 (589)
Q Consensus 105 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 183 (589)
.+.++.++++.......-.. .......+. +....+.......+..|+.+.+.+|.+|. +.|+.+
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~------~~r~~~ 432 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYP---------NSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL------RLRSKG 432 (513)
T ss_pred HHHHHHHHHHHHHHHhccCC---------CcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH------hHHhhh
Confidence 99999998876531111000 000111222 22222333344445567777889999997 345566
Q ss_pred HHHHHHH
Q 045410 184 FNWWYFS 190 (589)
Q Consensus 184 ~~~~~~~ 190 (589)
.++....
T Consensus 433 ~s~~~~~ 439 (513)
T KOG0254|consen 433 ASLAVAV 439 (513)
T ss_pred HHHHHHH
Confidence 6653333
No 249
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.76 E-value=1.5e-07 Score=101.49 Aligned_cols=185 Identities=17% Similarity=0.133 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
+++...+.+..+..+..+....+...++.+..|.++. -.......+...++.+++.++.|| +|||+.++.+.++.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc-cccccccccccccccc
Confidence 3444444455555454444555555666667777777 222233445566777788899999 5999999999988888
Q ss_pred HHHHHH-HhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH-HHhhccccccHHHHhhccCCCCCCCcchhhhhHHHH
Q 045410 109 GMGIMT-LTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALL-AIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNW 186 (589)
Q Consensus 109 ~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 186 (589)
+.+.++ .....+... +..+.. .++...+. .....+..+....+..|.||+ +.|+++.++
T Consensus 329 ~~~~~~~~~~~~~~~~------------~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt------~~R~~~~~~ 389 (451)
T PF00083_consen 329 CSLILGIIFFLGVSSS------------SWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPT------KVRSTGIGL 389 (451)
T ss_pred cccccccccccccccc------------cccccc-cceeeeeccccccccccccccccccccccc------ccccccccc
Confidence 777665 111011100 000111 11222222 222224456777888999998 457778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHhhcc
Q 045410 187 WYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIGYHT 235 (589)
Q Consensus 187 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~~ 235 (589)
.+....+++++++.+...+.+..+-...|.+.+.+.++..++.++..|+
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 8788888888888887777776662334444444444444433343343
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.76 E-value=0.00011 Score=77.39 Aligned_cols=168 Identities=8% Similarity=-0.060 Sum_probs=126.9
Q ss_pred HHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 36 GNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
...++..++.-.+.+++--|+ +++|-.+.--|.....-..+-.+.-++.+++..| +|+-+++.+++....+=.+....
T Consensus 378 ~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~ 455 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSY 455 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHH
Confidence 445555555555556665555 4677666666766666667777888889999999 59999999998888877777777
Q ss_pred hhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHH-HHHHH
Q 045410 116 TASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYF-SFTVA 194 (589)
Q Consensus 116 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g 194 (589)
.. ++|+.+..-+++|+..+.+..++.+|+.+..|++. +.++-++... .--+|
T Consensus 456 L~---------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG 508 (618)
T KOG3762|consen 456 LQ---------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLG 508 (618)
T ss_pred hc---------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccC
Confidence 66 88999999999999999999999999999999843 3344444222 34578
Q ss_pred HHHHHHHHHHHHhhcchhHhHHHHHHHHHHHHHHHHHh
Q 045410 195 LVVALTAVVYIQTNVSWILGFAIPTGCFFLSIVVFLIG 232 (589)
Q Consensus 195 ~~~~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 232 (589)
-.+|.+++|.+.+.+|-+..|.+.++..++.++.+...
T Consensus 509 ~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 509 KGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred cchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 88888999999999998888888776666555554443
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.67 E-value=8e-05 Score=77.13 Aligned_cols=179 Identities=14% Similarity=0.060 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHH--------HHHHHHHHHHh-hhhhhhHHhhhcccchHHH
Q 045410 29 RSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVN--------VVSIWGGSSSL-TAIPGALLSDTYLGRFRTL 99 (589)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~--------~~~~~~~~~~~-~~~~~G~laDr~~Grr~~l 99 (589)
+.++-....-|....++|+...+...-+ +..|+.+.+... .-.+......+ +-.++.++.|+ +|||++.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHH
Confidence 3344444556666677777655544433 455655444433 11222223333 66777888999 6999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchh
Q 045410 100 LYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQ 179 (589)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 179 (589)
+.+.+++++..+.++...+.+.- ....+...-+.+-+++-+..+....+-+|.||+ +.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~~~~----------------~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa------rv 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQLEN----------------TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPA------RV 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCcccccc----------------cCceeehHHHHHHHHhcCCCceeEEeehhhchH------HH
Confidence 99999999988888775531110 111122333445566666666777778899997 67
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hcchhHhHHHHHHHHHHHHHHHHH
Q 045410 180 LESFFNWWYFSFTVALVVALTAVVYIQT-----NVSWILGFAIPTGCFFLSIVVFLI 231 (589)
Q Consensus 180 r~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~g~~~~f~~~~~~~~i~~~~~~~ 231 (589)
|+++-++...+.=.|+++|.....++++ ..+.+..|++.+.+.++..++.++
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 8999999988999999999999999998 678888988877777666655443
No 252
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.64 E-value=0.0032 Score=69.17 Aligned_cols=137 Identities=15% Similarity=0.346 Sum_probs=92.5
Q ss_pred ccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchh
Q 045410 376 PGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISI 455 (589)
Q Consensus 376 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (589)
..|+...+.+......|+++++ +|.+||| ..+..|.++..++.++.+..+ +.
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~L----SDlfGRr-------~~~i~g~~l~vvG~Iv~atA~-----------------~~ 131 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRL----SDLFGRR-------YFFIIGSLLGVVGSIVCATAQ-----------------NM 131 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHH----HHHhcch-------HHHHHHHHHHHhHHHHhhcCC-----------------cH
Confidence 4566666777777777776665 6666554 478889999999998887654 45
Q ss_pred HHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcc
Q 045410 456 LVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKD 535 (589)
Q Consensus 456 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~ 535 (589)
..++.+.++.|+|.+..... ...+.|..|.+.|+.+.++...........++.+...+.. +..|
T Consensus 132 ~~~iag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~------~~~W--------- 195 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA------HSGW--------- 195 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc------CCCc---------
Confidence 56778889988887666544 4557899999999988887665554555555555544322 1145
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 045410 536 TLDYFYFTIAALEVVNLLYFNFF 558 (589)
Q Consensus 536 ~~~~~f~~~a~~~~~~~~~~~~~ 558 (589)
.|.|++.+.+..+++++++++
T Consensus 196 --Rw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 196 --RWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred --chHHHHHHHHHHHHHHHHHHH
Confidence 356666666666666554444
No 253
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.44 E-value=0.003 Score=67.27 Aligned_cols=160 Identities=14% Similarity=0.103 Sum_probs=101.7
Q ss_pred cccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhH
Q 045410 377 GWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISIL 456 (589)
Q Consensus 377 ~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (589)
+++-....++.++..+++++. ..|.+ +..+-+..|.+++.++.+++..+... .+...+
T Consensus 74 G~viaa~slg~~i~~liF~~W----s~k~~------~~k~Pli~s~ii~~~g~llY~~l~~~------------~~~~~y 131 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIW----SNKTG------SVKKPLIVSFLIAIIGNLLYLALAYV------------PNGVKY 131 (488)
T ss_pred hHHHHHHHHHHHhcchhhccc----ccccC------CcccCHHHHHHHHHHHHHHHHHHHhc------------ccchHH
Confidence 344445667777777887666 55543 11234788999999999999666520 122567
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcch
Q 045410 457 VLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDT 536 (589)
Q Consensus 457 ~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~ 536 (589)
++.++.++.|+|.+.... .=.|+++..-.+.|.++++.......+|..+||.+...+..+...+- .+.. +...+-
T Consensus 132 ~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~--~i~~--~~~~n~ 206 (488)
T KOG2325|consen 132 LMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGF--MILP--GLIFNM 206 (488)
T ss_pred HHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCce--EEcC--cceEEe
Confidence 778899999998654433 34777777777778888888888888889999888877665432211 1111 122222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccc
Q 045410 537 LDYFYFTIAALEVVNLLYFNFFACRFV 563 (589)
Q Consensus 537 ~~~~f~~~a~~~~~~~~~~~~~~~~~~ 563 (589)
|...=++.+.+.++.+++.++..+|..
T Consensus 207 YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 207 YTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred cchHHHHHHHHHHHHHHHHHhheeecc
Confidence 333445566666666666666666643
No 254
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.36 E-value=0.002 Score=70.95 Aligned_cols=127 Identities=13% Similarity=0.165 Sum_probs=94.4
Q ss_pred chhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHH
Q 045410 380 GLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLV 459 (589)
Q Consensus 380 ~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 459 (589)
..+..++.+++..+++. +.+|+|||+ .+..++++..++-+..++.. +++..+
T Consensus 124 ~s~~~~G~~vG~~i~g~----lsD~~GRk~-------~~~~~~~~~~i~~~~~a~a~-----------------~~~~~~ 175 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGP----LSDRFGRKP-------VLLVSLLLFIIFGILTAFAP-----------------NYWMFL 175 (521)
T ss_pred HHHHHHHHHHHHhhhee----hHhhcccHH-------HHHHHHHHHHHHHHHHHHhC-----------------cHHHHH
Confidence 34445555555555444 477776663 77888888888887777754 677778
Q ss_pred HHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHH
Q 045410 460 PQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDY 539 (589)
Q Consensus 460 ~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~ 539 (589)
+.-.+.|++........+.+..|..+++.|+.+..+ ......++.+++.....+.. +| .+
T Consensus 176 ~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W-----------r~ 235 (521)
T KOG0255|consen 176 IFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW-----------RW 235 (521)
T ss_pred HHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH-----------HH
Confidence 888999999999999999999999999999999999 77788888888888877764 44 34
Q ss_pred HHHHHHHHHHHHHHH
Q 045410 540 FYFTIAALEVVNLLY 554 (589)
Q Consensus 540 ~f~~~a~~~~~~~~~ 554 (589)
.+++.....++.+++
T Consensus 236 ~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 236 LFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555666666555444
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.18 E-value=0.016 Score=52.46 Aligned_cols=114 Identities=14% Similarity=0.185 Sum_probs=84.2
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHH
Q 045410 62 MDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLS 141 (589)
Q Consensus 62 ~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 141 (589)
+++..-..-.++.+....+..++.+.+.++ +|.|+.+++|.+.+.+-...... . +.+
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~-~---------------------~~~ 90 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFY-P---------------------NSY 90 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHh-h---------------------hHH
Confidence 344445555677777788888999999999 69999999999887754444332 2 557
Q ss_pred HHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 142 ILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVY 204 (589)
Q Consensus 142 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 204 (589)
.++.+-++.|++.+........++.+..++ +.+++-.+++....+.+.++|.++.-.
T Consensus 91 ~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~------~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 91 TLYPASALLGFGAALLWTAQGTYLTSYSTE------ETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHhhhhHHhhHhhhHHHHHcCCH------HHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999886543 345556677666667777777655433
No 256
>PRK03612 spermidine synthase; Provisional
Probab=97.15 E-value=0.052 Score=59.45 Aligned_cols=168 Identities=9% Similarity=-0.085 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHH-HHHHHHHHHH-
Q 045410 34 ILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLY-GSIASFLGMG- 111 (589)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~-~~~~~~~~~~- 111 (589)
+..+.|+..++..+.-....-.+...+|-+..+.+.+++++.++..++..++|+++++. -|+...+- +..+....+.
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ 97 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSAL 97 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHH
Confidence 33455555555555556666666667899999999999999999999999999987552 33322221 1111111111
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHH
Q 045410 112 IMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSF 191 (589)
Q Consensus 112 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 191 (589)
+........ ......++...++.++..|+..|....+..+.... ..++..+-.|...
T Consensus 98 ll~~~~~~~----------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~-------~~g~~~g~ly~~n 154 (521)
T PRK03612 98 ILYAAFAFQ----------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ-------HLGHNVATVLAAD 154 (521)
T ss_pred HHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------chhhhhhhhHhHH
Confidence 111111000 00112223334456777777777766665542211 1223456667788
Q ss_pred HHHHHHHHHHHHHHHh-hcch-hHhHHHHHHHHHHH
Q 045410 192 TVALVVALTAVVYIQT-NVSW-ILGFAIPTGCFFLS 225 (589)
Q Consensus 192 ~~g~~~~~~~~~~l~~-~~g~-~~~f~~~~~~~~i~ 225 (589)
++|+++|.++.+++.- ..|- +..+.++.+..+++
T Consensus 155 tlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 155 YLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred hHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 9999999999887664 5664 44444443333333
No 257
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.95 E-value=0.58 Score=48.05 Aligned_cols=61 Identities=8% Similarity=0.036 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 045410 457 VLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGL 517 (589)
Q Consensus 457 ~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~ 517 (589)
.++..+.+.+......+...+++-++++++..-|+.|.+-|+..++|+-.-..++..+.|.
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADG 431 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhccc
Confidence 3445677778877778888899999999999999999999999999877777777666653
No 258
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.85 E-value=0.0082 Score=47.92 Aligned_cols=67 Identities=15% Similarity=0.006 Sum_probs=60.6
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhh
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTA 117 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~ 117 (589)
+.+-+.+.++.++|.++.+++.+..++++.++.+...++.++ ..+++.+..+.++..+..+.+++..
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446666778999999999999999999999999999999999 4889999999999999999999876
No 259
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.62 E-value=0.6 Score=52.61 Aligned_cols=315 Identities=11% Similarity=-0.035 Sum_probs=179.0
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchh
Q 045410 60 YNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQ 139 (589)
Q Consensus 60 lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 139 (589)
.+...........++....++..+.....+|-..++-..+..-.+...+..+.+.+.. ++.. .....
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a~------------~~~~~ 81 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGAI------------PSSGH 81 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hccC------------ccccc
Confidence 3444556677888899999999999999999975555666666666666666666644 3220 00111
Q ss_pred HHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH------
Q 045410 140 LSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWIL------ 213 (589)
Q Consensus 140 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~------ 213 (589)
.....+..+.+.++.++..++-+.+.++..... .++.+.+..+.|++..+.+.+ |.+++..+.....-+.
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf---~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~ 157 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQF---EERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQ 157 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhc---CccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccC
Confidence 234456777788999999999999999988643 355677899999999998885 4566666665443222
Q ss_pred -hHHHHHHH-HHHHHHHHHHhhccccccCCCCChHHHHHHHHHHHHhccccccCCCCCCCccCCCCCccccccccccCCC
Q 045410 214 -GFAIPTGC-FFLSIVVFLIGYHTYIIKNPQGSVFVDMAKVITASCRKRKVNLGQASGNSLYDPPLTQSETESKTTKLPH 291 (589)
Q Consensus 214 -~f~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (589)
.|.....+ +++.++.+......++..++.+.......++......
T Consensus 158 ~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~--------------------------------- 204 (654)
T TIGR00926 158 DCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVT--------------------------------- 204 (654)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHH---------------------------------
Confidence 23333333 3333333444333322222211111111111111000
Q ss_pred CcchhhhhhhhhhhcCCccccCCCCCCCcccch--hhhHHHHHHHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhccccc
Q 045410 292 TNRFRCLDKAAVIVDSSELDDDGKAKNGWRLCS--LLQVEQLKLLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKRF 369 (589)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (589)
+...... ..+...+..|.+.. ...+++.+...+.+.++...+.+++.+.++......+..+.+...
T Consensus 205 ----------a~~~~~~--~~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~ 272 (654)
T TIGR00926 205 ----------ALRKRFS--TRSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMD 272 (654)
T ss_pred ----------HHHHhhc--cCCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhc
Confidence 0000000 00000112332221 112345677888888888888888877776667766666665543
Q ss_pred CcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 370 GSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKR 439 (589)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~ 439 (589)
+.+...+.....++.+-.++..++...+..++..++. | ...++..+.-+.+.+.++.+.+++.....
T Consensus 273 ~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~-~--~~~~ls~l~k~~iG~~la~la~~va~~ve 339 (654)
T TIGR00926 273 GDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIA-K--CGTRFTSLRKMAVGGLLAALSFFVAALVQ 339 (654)
T ss_pred CccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHH-h--cCCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223345566677777777776666566777662 1 11345567777777777777777665433
No 260
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.50 E-value=0.16 Score=49.82 Aligned_cols=92 Identities=9% Similarity=0.080 Sum_probs=67.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHH
Q 045410 413 TMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVS 492 (589)
Q Consensus 413 ~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~ 492 (589)
++...+.+|.+...++..++...... .-...+.|.+.....+.+.+..+.......-..+.+|. .||++
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~----------~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~v 132 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSG----------RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTV 132 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhC----------ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCce
Confidence 45557788988888888777665421 11124555666666666777777777776777799986 59999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 045410 493 GAVFFLSLSISSYINSALVNIIH 515 (589)
Q Consensus 493 ~g~~~~~~~lg~~l~~~l~~~i~ 515 (589)
.|+.....++++++-+.+...+.
T Consensus 133 vgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 133 VGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ehhhhHHHHhHHHHHHHHHHHHc
Confidence 99999999999999888877665
No 261
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.31 E-value=0.044 Score=58.90 Aligned_cols=128 Identities=18% Similarity=0.219 Sum_probs=105.5
Q ss_pred HHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhh-HHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045410 51 NMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGA-LLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTG 129 (589)
Q Consensus 51 ~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 129 (589)
.+..|+...+|++..+.+...+.......+++++.. .+.-. +|-|+.+..|+....+...+.+++.
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------ 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------ 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc------------
Confidence 446777788999999999999999999999999888 66666 6999999999999999999999988
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 130 AQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
+.|..+...++.++. +...|..-++.+.+..++ ++++.+++....-.+.++++|.+-+.+..
T Consensus 330 ---------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~------e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 330 ---------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPE------EQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred ---------cchhhhHHHHHHHhh-cchhHHHHhHHHhhcccc------cccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 667788887766665 666788888888887764 46677888888888888888888666643
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.11 E-value=0.054 Score=57.47 Aligned_cols=122 Identities=14% Similarity=0.142 Sum_probs=90.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCch--hhH
Q 045410 413 TMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPES--MRT 490 (589)
Q Consensus 413 ~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg 490 (589)
+.++.+..|.++++++.++++... ..+...+.+..++.++|.+..-+....++.+++|++ .|-
T Consensus 90 G~~~tI~lGail~~iGh~~L~~~~---------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 90 GTRRTIVLGAILMAIGHLVLAISS---------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc---------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC
Confidence 444589999999999999888642 123445677888888999999999889999998765 255
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 045410 491 VSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVSSN 566 (589)
Q Consensus 491 ~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~~ 566 (589)
.+.+++.+.-++|+.+++.+.+.+.+.. ++...|...++-..++++.++...+..++..
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~-----------------g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINY-----------------GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhh-----------------CHHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 5666777778899999999998886422 2456777888778888777777765555433
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.10 E-value=0.041 Score=57.54 Aligned_cols=128 Identities=14% Similarity=0.170 Sum_probs=76.4
Q ss_pred hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHH-HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCc
Q 045410 59 KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRT-LLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEG 137 (589)
Q Consensus 59 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 137 (589)
.-|.+...+|++.....++.+++++++|.++||. ...|- .++......++. ++.+..+.. .
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~~-~~l~~~t~~----------------~ 356 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVGT-LMLLTCTLF----------------L 356 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHH-HHHHHhhcc----------------C
Confidence 4577888999999999999999999999999995 55444 333333333332 222211010 0
Q ss_pred hhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045410 138 WQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVS 210 (589)
Q Consensus 138 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 210 (589)
...+.++.--.+.|+......|.-.-+..|..-|..++. ..++.+...++-+++-.+.-+...+..+
T Consensus 357 ~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~t------SsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 357 GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGT------SSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcc------cceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 122334444566777777788888888888543332222 2334334455555555555566666554
No 264
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.76 E-value=0.054 Score=56.68 Aligned_cols=168 Identities=12% Similarity=0.095 Sum_probs=107.6
Q ss_pred HHHHhHHHHHHHHHHHHHhhhcchhhHHhhhhhcccccCcccccccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCC
Q 045410 332 KLLVAMFPVWITGIFCFLAMDQQNTIGILQAIQTNKRFGSFNVPPGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIR 411 (589)
Q Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~ 411 (589)
++++..........+.|..--++.+.+..+ .+.+... .+.+....++..++..|+.+...|+--.|++||++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP- 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP- 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCccc------ccccccccccccceecccccccccccccccccccc-
Confidence 455555556666777777666555544322 2333322 44556667778888899999998888888887754
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHH
Q 045410 412 LTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTV 491 (589)
Q Consensus 412 ~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~ 491 (589)
.+..+....++++.++++.......-..+...+.-+-.....++.+.+.=+...+...++=++..+..-++.+.+
T Consensus 104 -----fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~ 178 (498)
T KOG0637|consen 104 -----FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT 178 (498)
T ss_pred -----hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh
Confidence 788888888899988888763322111111100111222223334444444554555666788999987777777
Q ss_pred -HHHHHHHHHHHHHHHHHHHHH
Q 045410 492 -SGAVFFLSLSISSYINSALVN 512 (589)
Q Consensus 492 -~~g~~~~~~~lg~~l~~~l~~ 512 (589)
+.+.+.+..++|+.+|-.+.+
T Consensus 179 ~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 179 RANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred ccchhHHHHHHhcceeeeeccc
Confidence 999999999999998866654
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.61 E-value=0.0025 Score=69.92 Aligned_cols=169 Identities=11% Similarity=0.100 Sum_probs=2.9
Q ss_pred cccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHH----HHHhhhhh--------
Q 045410 377 GWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVE----RKRRLSAL-------- 444 (589)
Q Consensus 377 ~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~----~~~~~~~~-------- 444 (589)
+.+...+-++.++...++..+ .+|. ++++++.+|.++++++.+++.+.+ .+......
T Consensus 41 G~i~s~~di~~~~~~~~vsy~----g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~ 109 (539)
T PF03137_consen 41 GLISSSYDIGSLVVVLFVSYF----GGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI 109 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence 344444455555555554333 3332 455699999999999999988653 11101000
Q ss_pred ---cc----------------C--CCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHH
Q 045410 445 ---QH----------------G--SFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSIS 503 (589)
Q Consensus 445 ---~~----------------~--~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 503 (589)
.. . +.......+.++++.++.|+|..-.++...+|+-|.++++.-+.+.|+......+|
T Consensus 110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lG 189 (539)
T PF03137_consen 110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILG 189 (539)
T ss_dssp ------------------------------------------SSS-----------------------------------
T ss_pred ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhcc
Confidence 00 0 11112234556778899999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhhc----ccc--------ccCCCCCCCCCCCcchhHH-HHHHHHHHHHHHHHHHHHHhccccc
Q 045410 504 SYINSALVNIIHGL----TKK--------YAKAPWLGGTDLNKDTLDY-FYFTIAALEVVNLLYFNFFACRFVS 564 (589)
Q Consensus 504 ~~l~~~l~~~i~~~----~~~--------~~~~~w~~~~~~~~~~~~~-~f~~~a~~~~~~~~~~~~~~~~~~~ 564 (589)
-++|-.+++..... ... ..++.|.+ .-| -|.+.+.+.++..+.++.+-++..+
T Consensus 190 Pa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvG--------AWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 190 PALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVG--------AWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHH--------HHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 88887777755432 211 11233433 112 2556666666666666666444443
No 266
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.24 E-value=0.12 Score=57.74 Aligned_cols=170 Identities=12% Similarity=0.114 Sum_probs=109.2
Q ss_pred ccccchhhHHHHHHHHHhhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH----Hhhhhh------c
Q 045410 376 PGWMGLISMLTLSTWIFFYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERK----RRLSAL------Q 445 (589)
Q Consensus 376 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~----~~~~~~------~ 445 (589)
.+.+..-+-++.++.+.++..+ ..|. ++.+++.+|+++++++.++..+.... .++... .
T Consensus 134 sG~I~s~~dig~~l~i~fVsYf----G~r~-------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~ 202 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSYF----GSRG-------HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVEN 202 (735)
T ss_pred ceeEeeecccchhhhhHhHHHh----cccc-------CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccC
Confidence 4444445555555555554443 4442 44558999999999999999876311 111100 0
Q ss_pred c---------------C-----CC----C-ccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHH
Q 045410 446 H---------------G-----SF----E-SPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSL 500 (589)
Q Consensus 446 ~---------------~-----~~----~-~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 500 (589)
. . +. . +...+..++.+.++.|+|..-.++....|+-|-+-++.-..+.|+.+...
T Consensus 203 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 203 PSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred CccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 0 0 11 1 11244456778889999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhhhcccc---------ccCCCCCCCCCCCcchhHH-HHHHHHHHHHHHHHHHHHHhccccc
Q 045410 501 SISSYINSALVNIIHGLTKK---------YAKAPWLGGTDLNKDTLDY-FYFTIAALEVVNLLYFNFFACRFVS 564 (589)
Q Consensus 501 ~lg~~l~~~l~~~i~~~~~~---------~~~~~w~~~~~~~~~~~~~-~f~~~a~~~~~~~~~~~~~~~~~~~ 564 (589)
.+|=++|-.++++....... ..++.|.+ .-| -|++++.+.++..+.++++-++.++
T Consensus 283 ~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIG--------AWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIG--------AWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhh--------HHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 88888887777766532211 01234433 223 3778888888887777777555543
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.82 E-value=0.21 Score=52.24 Aligned_cols=124 Identities=17% Similarity=0.126 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCch---hhHHHH
Q 045410 417 RITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPES---MRTVSG 493 (589)
Q Consensus 417 ~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~---~rg~~~ 493 (589)
.+.+|.++..+|.+++.+.... . ......+...+.++..+.++|.++.-|....+..++++++ .|..+.
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~----~----~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F 74 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIP----P----SLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFF 74 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTS----S----SC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhc----c----hhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhH
Confidence 5778888888898886655310 0 0001223456677888999999999999999999999876 355555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 045410 494 AVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACRFVSS 565 (589)
Q Consensus 494 g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~~~~~ 565 (589)
..+....++|+.++..+.+.+-+.. ++.+.|.+.++..+++.+.++...++.++.
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~-----------------~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNY-----------------GWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS------------------HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred HHHHHHHhhhhHhhcccchhhcccc-----------------chhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 6667777889999888887775321 356678888888888877766655554443
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.71 E-value=0.28 Score=52.63 Aligned_cols=118 Identities=22% Similarity=0.217 Sum_probs=79.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhcc---Cchhh
Q 045410 413 TMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQL---PESMR 489 (589)
Q Consensus 413 ~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~---P~~~r 489 (589)
+++..+.+|.++..++.+.++.... ...+.......+.+..+|..+.....-++..|.. |.+ |
T Consensus 57 rr~~Y~~i~~~~~~~~~~~~~~~~~-------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~ 122 (433)
T PF03092_consen 57 RRKPYMIIGWLLGAVSALVLALLPA-------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-R 122 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHhccc-------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-h
Confidence 3445777788877777776666541 0123334455667778888888888888888776 455 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 045410 490 TVSGAVFFLSLSISSYINSALVNIIHGLTKKYAKAPWLGGTDLNKDTLDYFYFTIAALEVVNLLYFNFFACR 561 (589)
Q Consensus 490 g~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~~f~~~a~~~~~~~~~~~~~~~~ 561 (589)
|..++.......+|+.++..+.|...+... +...|.+.+.+.++..+..+++..|
T Consensus 123 g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-----------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 123 GDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-----------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-----------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 888888888999999999999987765321 1234566666666666566666555
No 269
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.20 E-value=6.6 Score=40.37 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=56.5
Q ss_pred hhhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhH
Q 045410 393 FYERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFA 472 (589)
Q Consensus 393 l~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~ 472 (589)
+.+.++..+.||+|||+ ......++..++++.-.. .+...++.+-++.|++....
T Consensus 84 i~g~~~G~laD~~Grk~-------~cl~~cily~~scl~k~~------------------~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 84 IFGTFVGSLADRYGRKK-------ACLLFCILYSLSCLTKHS------------------SNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHHHHHHHHHHhcCchH-------HHHHHHHHHHHHHHHHhc------------------cccHHHHHHHHHHHHHHHHH
Confidence 33444555588877663 556666666666653322 24556778889999998887
Q ss_pred hhhHHHHHh-----hccCchhhHHHHHHHH-HHHHHHHHHHHHHHHHhh
Q 045410 473 AVAVMEFLT-----TQLPESMRTVSGAVFF-LSLSISSYINSALVNIIH 515 (589)
Q Consensus 473 ~~~~~~~~~-----~~~P~~~rg~~~g~~~-~~~~lg~~l~~~l~~~i~ 515 (589)
+.+.=++.. +..|++..+...+... ..+.+-.+.++.+.....
T Consensus 139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 776555544 4466666555544433 233344444444444444
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.99 E-value=1.7 Score=39.31 Aligned_cols=84 Identities=14% Similarity=0.146 Sum_probs=66.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHH
Q 045410 414 MRQRITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSG 493 (589)
Q Consensus 414 ~~~~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~ 493 (589)
+++.+.+|.++..+-.+..... +.+.+++.-++.|++.+....+.-.++.+...++.|++-.
T Consensus 66 ~K~sm~lg~~~y~~y~~~~~~~------------------~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~ 127 (156)
T PF05978_consen 66 PKWSMILGSLGYAIYIASFFYP------------------NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNT 127 (156)
T ss_pred hHHHHHHHHHHHHHHHHHHHhh------------------hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHH
Confidence 3356777777666554443322 4567788999999999999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 045410 494 AVFFLSLSISSYINSALVNIIH 515 (589)
Q Consensus 494 g~~~~~~~lg~~l~~~l~~~i~ 515 (589)
+++.....++..+|..+.-.+.
T Consensus 128 ~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 128 GIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888887765554
No 271
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=93.82 E-value=1.9 Score=43.88 Aligned_cols=94 Identities=6% Similarity=0.030 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--ccCCCCCCCCC
Q 045410 454 SILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHGLTKK--YAKAPWLGGTD 531 (589)
Q Consensus 454 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~--~~~~~w~~~~~ 531 (589)
++|+.-..+++...-.++..+....-+.+....+.-|...|++.+..-+-+.+-+. .+.|..+. +-.+++
T Consensus 325 ~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~----- 396 (433)
T KOG3810|consen 325 HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQF----- 396 (433)
T ss_pred ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeE-----
Confidence 56677778888877777777766666667777777888888876654433333222 22232111 000111
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHH
Q 045410 532 LNKDTLDYFYFTIAALEVVNLLYFNFF 558 (589)
Q Consensus 532 ~~~~~~~~~f~~~a~~~~~~~~~~~~~ 558 (589)
.-|...|.+++++.++.....+..
T Consensus 397 ---~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 397 ---VVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred ---EEEeehHHHHHHHHHHHHHHHHHH
Confidence 124456788888888886654444
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.35 E-value=3.1 Score=44.37 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=100.0
Q ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045410 50 ANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTG 129 (589)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 129 (589)
..+..|+..+ |+++...|..=+...+....+.....++.+| +|..|.=+++...-.+...++..+-..|....
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~----- 351 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF----- 351 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc-----
Confidence 4567888766 9999999999999999999999999999999 59999999998876665555544332222000
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHH
Q 045410 130 AQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAV 202 (589)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 202 (589)
+..+...++.+.++-=+|--++.-+..-++-|..|+ ++|+...+..+...++.-.+-..++
T Consensus 352 ------~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~------~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 352 ------SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPE------SERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred ------hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH------HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 123555666666666677777788888888888876 4588888888778888877776554
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.54 E-value=24 Score=38.41 Aligned_cols=168 Identities=11% Similarity=0.049 Sum_probs=92.5
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcC---CchhHHHHHHHHHHH-HHHhhhhhhhHHhhhcccchHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYN---MDGILLVNVVSIWGG-SSSLTAIPGALLSDTYLGRFRTLLYG 102 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~~~ 102 (589)
-++.++.+.++-|+..+.|..+.. +.|.+= .+......+-....+ ...+...+-.++++|+ +|.+++-+.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR~-----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~ 95 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILRD-----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYII 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHH
Confidence 355555555666666665432222 233221 244555555443333 5566678899999995 999999888
Q ss_pred HHHHHHHHHHHHHhhcCCC---CCCCCCCCC--C--CCCCCc----hhHHHHHHHHHHHHHhhccccc-cHHHHhhccCC
Q 045410 103 SIASFLGMGIMTLTASIPK---LRPPDCTGA--Q--CPQPEG----WQLSILYAGLALLAIGSGGIRP-CNIAFGADQFD 170 (589)
Q Consensus 103 ~~~~~~~~~~~~~~~s~~~---~~~~~~~~~--~--~~~~~~----~~~~~~~~~~~l~g~g~g~~~~-~~~~~~~~~~~ 170 (589)
.+.+.....++++.- .|- +.++...++ . +..-.+ .+.|...+.-+..-+-.....+ .-+.+..|.++
T Consensus 96 ~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt 174 (491)
T PF03219_consen 96 IIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 777777666666542 221 222111000 0 000000 0112222221222222222223 35788888887
Q ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 171 TTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 171 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
. ++-.+.+.+++.+.|+|.+++..+..++.+
T Consensus 175 ~------~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 175 V------EEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 345568999999999999999888888877
No 274
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=90.14 E-value=31 Score=37.34 Aligned_cols=56 Identities=9% Similarity=0.021 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhHhh-hHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045410 461 QFSFSGLTEGFAAV-AVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHG 516 (589)
Q Consensus 461 ~~~l~g~g~~~~~~-~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 516 (589)
.++..-+...+... ..|.++.|.+..++..+-.++.....++|..+++.+...+.+
T Consensus 134 FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 134 FYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444443 789999999999999999999999999999999999887664
No 275
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=89.46 E-value=34 Score=36.82 Aligned_cols=165 Identities=9% Similarity=0.003 Sum_probs=100.5
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCc---hhHHHHHHHHHHH-HHHhhhhhhhHHhhhcccchHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMD---GILLVNVVSIWGG-SSSLTAIPGALLSDTYLGRFRTLLYG 102 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s---~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~l~~~ 102 (589)
-++.++.+.+..++..+.++.+.. +.|.+.++ +....++-..+.+ .+.+..++-+++.+++ -|.+++-.-
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 466677777777777777654443 55666554 5555666666666 6778889999999995 999999988
Q ss_pred HHHHHHHHHHHHHhhcCC--C-CCCCCCC-------CC-----CCCCCCchhHHHHHHHHHHHHHhhccccc-cHHHHhh
Q 045410 103 SIASFLGMGIMTLTASIP--K-LRPPDCT-------GA-----QCPQPEGWQLSILYAGLALLAIGSGGIRP-CNIAFGA 166 (589)
Q Consensus 103 ~~~~~~~~~~~~~~~s~~--~-~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~l~g~g~g~~~~-~~~~~~~ 166 (589)
...+....+++++.- .| + +.++... +. ..+-.+.++...+++.- -+-...+.+ .-+....
T Consensus 99 ~~~F~~fF~LFa~Vi-~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~a---ELWgslV~S~lFw~faN 174 (509)
T COG3202 99 LGFFLGFFALFAFVI-YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMA---ELWGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHHH-hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 888888888877753 22 1 2221110 00 00011112222222221 111111112 3456667
Q ss_pred ccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 167 DQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQT 207 (589)
Q Consensus 167 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 207 (589)
|++.. ++-.|.+++++...|++..++..+..++.+
T Consensus 175 eitt~------~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 175 EITTI------EEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HhhhH------HHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77664 344568999999999999998888888775
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.10 E-value=27 Score=37.52 Aligned_cols=128 Identities=22% Similarity=0.199 Sum_probs=74.4
Q ss_pred hcCCchhHHHHHHHH-HHHHHHhhhhhhhHHh---hhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCCCCC
Q 045410 59 KYNMDGILLVNVVSI-WGGSSSLTAIPGALLS---DTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDC-TGAQCP 133 (589)
Q Consensus 59 ~lg~s~~~~~~~~~~-~~~~~~~~~~~~G~la---Dr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~ 133 (589)
..+.++...-.+.++ ...+..++..+.+.+. +| +||++.+.++.++..++.++..+.. |...+ .. ++..+.
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~dap-~~~t~~~~~ 347 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PNDAP-LRPTDSPPL 347 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cccCC-CCCCccccc
Confidence 445554444333222 2233344455555565 55 6999999999888888777766532 32111 00 011111
Q ss_pred CCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHH
Q 045410 134 QPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVA 198 (589)
Q Consensus 134 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 198 (589)
. ...+.....+.-+++|++-++.....+.++++.+|++ |..+++++-.--.++..++
T Consensus 348 ~-~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 348 L-FTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred c-cccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHH
Confidence 1 1123445556667899999999999999999999642 4456666555555555443
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=88.78 E-value=6.3 Score=41.43 Aligned_cols=61 Identities=8% Similarity=-0.037 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 139 QLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYI 205 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 205 (589)
+.|..++..+..|+..|+.+.+....+.|..++ +.|..+++...++-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~------~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPP------EDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCH------HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 567777777888999999999999999987665 3466778888788888888887665444
No 278
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.32 E-value=5.7 Score=39.86 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 454 SILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALV 511 (589)
Q Consensus 454 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~ 511 (589)
+++.++..+++-|+-.+..+...+--+.+..+++.|-.+++...+.-.+|-.++..+.
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 5555555555566666666666666677888999999999997777777777766655
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=85.11 E-value=36 Score=35.96 Aligned_cols=82 Identities=18% Similarity=0.196 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCccchhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHH
Q 045410 417 RITIGILMAILSLLVAGFVERKRRLSALQHGSFESPISILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVF 496 (589)
Q Consensus 417 ~i~~g~~l~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 496 (589)
.++++.+...+...++.+.. +..++-+.-++.|++... -.+-++|+...+|++.=-++.+..
T Consensus 73 viil~~~~~i~t~~lll~~~-----------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~ 134 (412)
T PF01770_consen 73 VIILQALSYIITWLLLLFGT-----------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYT 134 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHC-----------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHH
Confidence 55555555555555544432 555666666667776554 456678999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 045410 497 FLSLSISSYINSALVNIIHG 516 (589)
Q Consensus 497 ~~~~~lg~~l~~~l~~~i~~ 516 (589)
..+.-+|..++..++..+..
T Consensus 135 raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 135 RAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888876654
No 280
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.49 E-value=30 Score=33.96 Aligned_cols=52 Identities=10% Similarity=0.298 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-------hcchhHhHHHHHHHHHHHHHHHHHhhcccc
Q 045410 184 FNWWYFSFTVALVVALTAVVYIQT-------NVSWILGFAIPTGCFFLSIVVFLIGYHTYI 237 (589)
Q Consensus 184 ~~~~~~~~~~g~~~~~~~~~~l~~-------~~g~~~~f~~~~~~~~i~~~~~~~~~~~~~ 237 (589)
.....++.++|+++.-+. ++.. ...|++.+.+.+.+.++-++++.+.-++..
T Consensus 8 s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd 66 (267)
T PF07672_consen 8 SQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFD 66 (267)
T ss_pred eeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 333444667777766432 3222 135999988888777777766666555443
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=83.88 E-value=11 Score=37.02 Aligned_cols=139 Identities=13% Similarity=0.079 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhcccch--HHHHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCCCCCCCCCchhHH
Q 045410 65 ILLVNVVSIWGGSSSLTAIPGALLSDTYLGRF--RTLLYGSIASFLGMGIMTLTA-SIPKLRPPDCTGAQCPQPEGWQLS 141 (589)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~l~~~~~~~~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~ 141 (589)
.--|.+.+.+.++.++++-+..++..|. ..| ..+.+..+..++...+..+.. ..|+ ..++.
T Consensus 282 iPhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~---------------kes~~ 345 (454)
T KOG4332|consen 282 IPHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSPS---------------KESPS 345 (454)
T ss_pred CCchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCCC---------------cCCch
Confidence 3358889999999999988888887773 322 334444444444333333322 1222 12445
Q ss_pred HHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHHHH
Q 045410 142 ILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSWILGFAIPTGC 221 (589)
Q Consensus 142 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~ 221 (589)
.-+++..++-.+.|.+.|.+.-+=.+..|+ +.|++.+++|..-.|+-..++-...-.-....+-|-.|-++.+.
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPE------earstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~ 419 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPE------EARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAF 419 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCH------HHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHH
Confidence 557777788889999999999988888876 45888999998888776654421100000113456677776665
Q ss_pred HHHH
Q 045410 222 FFLS 225 (589)
Q Consensus 222 ~~i~ 225 (589)
...+
T Consensus 420 ~~~a 423 (454)
T KOG4332|consen 420 LFVA 423 (454)
T ss_pred HHHH
Confidence 5444
No 282
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=83.28 E-value=8.8 Score=41.27 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=25.0
Q ss_pred HhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 472 AAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVN 512 (589)
Q Consensus 472 ~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~ 512 (589)
...+.-.++..+..++.++.+.-.....+.+|-+++..+.-
T Consensus 135 QDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFl 175 (544)
T PF13000_consen 135 QDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFL 175 (544)
T ss_pred CCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHH
Confidence 34455556666777777877776655555566665544443
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=81.85 E-value=10 Score=40.56 Aligned_cols=114 Identities=12% Similarity=0.012 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhcccch-HHHHHHHHHHHHHHHHHHHhhcCC-----CCCCCCCCCCCCCCCCchh
Q 045410 66 LLVNVVSIWGGSSSLTAIPGALLSDTYLGRF-RTLLYGSIASFLGMGIMTLTASIP-----KLRPPDCTGAQCPQPEGWQ 139 (589)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-~~l~~~~~~~~~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~~~ 139 (589)
-.-.+..+|.++-.+|..+..+..=. .+| +.+.+..++-.+...++.+...-| .+.+ +
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~~p--~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~--------------~ 371 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFMWP--DEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFP--------------G 371 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEee--CCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeec--------------c
Confidence 44556677777777777755543111 222 245555565555555544433111 1111 3
Q ss_pred HHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 045410 140 LSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTA 201 (589)
Q Consensus 140 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 201 (589)
.+..++..++.|+.+|...+....+..+..++ ++|..+-.+...+.++|-.+|..+
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~------~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDP------HEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556667899999999988888888887654 234445555555667777766654
No 284
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=80.47 E-value=9.2 Score=37.49 Aligned_cols=29 Identities=7% Similarity=-0.002 Sum_probs=18.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045410 486 ESMRTVSGAVFFLSLSISSYINSALVNII 514 (589)
Q Consensus 486 ~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 514 (589)
+-+|..+.|+..+..+..+.+.++..+.+
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grf 102 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRF 102 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 33466777776666666666666666543
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=80.05 E-value=21 Score=34.54 Aligned_cols=62 Identities=18% Similarity=0.245 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHHHhHhhhHHHHHhhccCc-hhhHHHHHHHHH-HHHHHHHHHHHHHHHhhh
Q 045410 455 ILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPE-SMRTVSGAVFFL-SLSISSYINSALVNIIHG 516 (589)
Q Consensus 455 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~lg~~l~~~l~~~i~~ 516 (589)
.+.++......+++.+...+....+..+..|+ +.|+...+.... ...++..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555557888888889999999999998 678888888877 466777788766665543
No 286
>PRK03612 spermidine synthase; Provisional
Probab=79.63 E-value=90 Score=34.33 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=31.1
Q ss_pred HHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045410 464 FSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHG 516 (589)
Q Consensus 464 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 516 (589)
+.++..+...|....+..+... +.-|...|-....+.+|+.+|+.+.+++.-
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 3455555556665554443222 123455666667788888888888886653
No 287
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=71.99 E-value=67 Score=33.65 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=29.1
Q ss_pred HHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHH
Q 045410 462 FSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSA 509 (589)
Q Consensus 462 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~ 509 (589)
+.+.-+.......+.-.++..+..++.-|-+.-.....+..|-+++..
T Consensus 140 f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 140 FLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 344445555556666777777777777777666555555555555543
No 288
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.92 E-value=11 Score=31.22 Aligned_cols=45 Identities=20% Similarity=0.047 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 71 VSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 71 ~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
+++=.+...+.....||+.|||.|.++..++.+++...+...+-.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 344455555666778999999999999888777766655554444
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=70.99 E-value=1.5e+02 Score=31.70 Aligned_cols=59 Identities=17% Similarity=0.244 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045410 454 SILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVN 512 (589)
Q Consensus 454 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~ 512 (589)
+-++.++.+.+.|+..+......+.+..+.++++.|..+..+...+..+|-.+|..+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455566888999999999999999999999999999999998888888888877653
No 290
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=69.80 E-value=70 Score=32.72 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=58.2
Q ss_pred HHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHh
Q 045410 37 NETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLT 116 (589)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~ 116 (589)
+.++..+.-|.=...+...+.. ++.....+.+. .......++.+.+..+ +|-|.++.++...... ....
T Consensus 36 ~~fl~~f~a~~gl~nlq~~vn~--~lg~~sl~~~y----~~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~l----yiA~ 104 (390)
T KOG3097|consen 36 IAFLLTFTAYLGLQNLQTSVNY--DLGTVSLGALY----LSLIDSSMFMPLLIRF-LGTKWTMVLAVFPYAL----YIAA 104 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--Ccccchhhhhh----HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH----HHHh
Confidence 3333334434444555555433 33333333333 3334444555577777 6999999877654433 1111
Q ss_pred hcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccC
Q 045410 117 ASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQF 169 (589)
Q Consensus 117 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 169 (589)
. .. ..+..++.+-++.|+|.+.+.+.--+|+.+.-
T Consensus 105 N-l~-----------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 105 N-LE-----------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred h-cc-----------------hhHHhhccHHHhhccccccccccCcceecHHH
Confidence 1 11 14566778888899999888777777666643
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=68.46 E-value=15 Score=38.44 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=68.6
Q ss_pred HhHhhhHHHHHHHHHHhc---CCchhHHHHHHHH-HHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhc
Q 045410 43 LASMSLIANMTVYLRTKY---NMDGILLVNVVSI-WGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTAS 118 (589)
Q Consensus 43 ~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~-~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s 118 (589)
+.|....+..|.+..+.. ..++.-.-.+..+ |.+...+|.+...++-++ +||+. .+..++-.+...++.+...
T Consensus 257 lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l-~i~v~lR~lfiPlF~~cn~ 333 (406)
T KOG1479|consen 257 LVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKL-TIPVLLRLLFIPLFLLCNY 333 (406)
T ss_pred eeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCcee-hHHHHHHHHHHHHHHHhcc
Confidence 333333345566655432 1234455555666 778888888888777776 44444 4445555554444444332
Q ss_pred --CCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhccccccHHHHhhccCCCC
Q 045410 119 --IPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTT 172 (589)
Q Consensus 119 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 172 (589)
.|.+.+ +-++++....++|+..|-...+...+..+..|++
T Consensus 334 ~~~~v~~~--------------~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~ 375 (406)
T KOG1479|consen 334 PPLPVVFE--------------SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPS 375 (406)
T ss_pred CCCCceec--------------CchHHHHHHHHHHhccchHhhheehhcCCCCChH
Confidence 222222 3456777778999999999999999888887764
No 292
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=67.38 E-value=9.8 Score=37.20 Aligned_cols=76 Identities=12% Similarity=0.202 Sum_probs=56.5
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHH---------hhh
Q 045410 21 SQRPKGGWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALL---------SDT 91 (589)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr 91 (589)
.+++-++|+...+.. .-+.+...-....+++..|++ +.|.++.....+..+..+.-++..++.|.. -||
T Consensus 10 stkPigr~svf~yGv-GHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr 87 (412)
T KOG4830|consen 10 STKPIGRTSVFAYGV-GHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR 87 (412)
T ss_pred CCCcccceeeeeech-hHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh
Confidence 344467777655443 455556666777888999997 568888888899999999999999998754 578
Q ss_pred cccchHHH
Q 045410 92 YLGRFRTL 99 (589)
Q Consensus 92 ~~Grr~~l 99 (589)
+|||+..
T Consensus 88 -~G~~~~w 94 (412)
T KOG4830|consen 88 -IGRRMSW 94 (412)
T ss_pred -hcceeee
Confidence 5999764
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=63.92 E-value=2.2e+02 Score=30.98 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=38.6
Q ss_pred hhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045410 474 VAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALVNIIHG 516 (589)
Q Consensus 474 ~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 516 (589)
...|.++.+.++.++..+..++.....++|..+++.+...+.+
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999998887765
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=62.03 E-value=2.2e+02 Score=30.14 Aligned_cols=58 Identities=21% Similarity=0.257 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHHhHhhhHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 045410 454 SILVLVPQFSFSGLTEGFAAVAVMEFLTTQLPESMRTVSGAVFFLSLSISSYINSALV 511 (589)
Q Consensus 454 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~ 511 (589)
+-++.+....++|+..+-.....+.+..+..|++.+-.+..+.......|-+.|..+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4456677778888888888888889999999999998888887777666666665544
No 295
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=60.56 E-value=31 Score=24.82 Aligned_cols=40 Identities=10% Similarity=0.001 Sum_probs=27.5
Q ss_pred HHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHH
Q 045410 72 SIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMG 111 (589)
Q Consensus 72 ~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~ 111 (589)
+.......+.....|+..|+++|.++...+..++..++..
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~g 46 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAAG 46 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 3444556667778899999999997777666555554433
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=54.10 E-value=2.9e+02 Score=29.08 Aligned_cols=73 Identities=7% Similarity=-0.027 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHH
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~ 105 (589)
+++-+..+..+.+--.+-.....|+.+-.|-+..-...-..+-.....+..++.|-.-|+ ..|+|++...+.+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg-~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDG-MSRVKVIQTWLLL 102 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcc-hhHHHHHHHHHhh
Confidence 444445555555555555556667664455333333322333334556667777888999 5999999887653
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=49.73 E-value=5.5 Score=40.48 Aligned_cols=111 Identities=12% Similarity=0.049 Sum_probs=3.7
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhhcC------CCCCCCCCCCCCCCCCCchhHHHH
Q 045410 70 VVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSIASFLGMGIMTLTASI------PKLRPPDCTGAQCPQPEGWQLSIL 143 (589)
Q Consensus 70 ~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~~~~~~~~~~s~------~~~~~~~~~~~~~~~~~~~~~~~~ 143 (589)
+..+|.++-.+|..+.++.-=+. .++|.+.+..++-.+...++.+...- |.+.+ +.+..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~--------------~d~~~ 251 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPG-PSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFN--------------SDAWF 251 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecc-cccccHHHHHHHHHHHHHHHHHHHhhcccccCCCccc--------------chHHH
Confidence 45678888888888887753220 13444555555544443333333211 11111 33456
Q ss_pred HHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHH
Q 045410 144 YAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTA 201 (589)
Q Consensus 144 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 201 (589)
++..+++|+.+|-..+....+..+..++++ |..+-.+...+.++|-.+|..+
T Consensus 252 ~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 252 IILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---------------HHHH---------------------------------------
T ss_pred HHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 666788999999999999999888877432 2222333334556666666544
No 298
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=46.29 E-value=54 Score=27.09 Aligned_cols=33 Identities=6% Similarity=-0.073 Sum_probs=20.9
Q ss_pred HHHHhhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 045410 76 GSSSLTAIPGALLSDTYLGRFRTLLYGSIASFL 108 (589)
Q Consensus 76 ~~~~~~~~~~G~laDr~~Grr~~l~~~~~~~~~ 108 (589)
++..+...+.|+..|+.+|-.+.+.+.+++..+
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 344555667788888888877655555444443
No 299
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=43.86 E-value=2.8e+02 Score=26.09 Aligned_cols=31 Identities=29% Similarity=0.476 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHhHhhhHHHHHhhccCc
Q 045410 456 LVLVPQFSFSGLTEGFAAVAVMEFLTTQLPE 486 (589)
Q Consensus 456 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~ 486 (589)
....+...+.++.|++......++....-|+
T Consensus 174 ~~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP~ 204 (205)
T PF01891_consen 174 QAYLPSHLLLAFPEGFLTGMVVTFLVVYRPE 204 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3445667777888988887777777666553
No 300
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=43.33 E-value=2.9e+02 Score=25.99 Aligned_cols=48 Identities=17% Similarity=-0.136 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHh---hhcccchHHHHHHHHHHHHHHHHHHH
Q 045410 67 LVNVVSIWGGSSSLTAIPGALLS---DTYLGRFRTLLYGSIASFLGMGIMTL 115 (589)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~G~la---Dr~~Grr~~l~~~~~~~~~~~~~~~~ 115 (589)
..........+..++..+++.+. .+ ..+|+.....+++-.+......+
T Consensus 48 ~~~~~~~~i~~F~~G~~~~~~i~~~~~~-~~~~~~~~~~l~~~~~ll~~~~~ 98 (209)
T PF06912_consen 48 GALRYLLAILSFILGAFLAGLIVRRSRR-RRRRRWYRILLLLEAILLLIAAL 98 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhHHHHHHHHHHHHHHHHHHH
Confidence 33334445556667777777772 23 24555555555554444444333
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.25 E-value=2e+02 Score=24.05 Aligned_cols=35 Identities=20% Similarity=0.060 Sum_probs=27.9
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 045410 484 LPESMRTVSGAVFFLSLSISSYINSALVNIIHGLT 518 (589)
Q Consensus 484 ~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~ 518 (589)
..++.++.+.++-..+-.+++.+-+...|++.|..
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567888888888888888888888888888754
No 302
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=33.77 E-value=1.2e+02 Score=33.88 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=55.2
Q ss_pred chhHHHHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045410 137 GWQLSILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNV 209 (589)
Q Consensus 137 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 209 (589)
+.+.++++.--+++|++.........-+.-+++|+ +.|+.+.+++.....+|..+...+........
T Consensus 455 ~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~------sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 455 PMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPE------SMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred CeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34778888889999999999877777777788886 57888999999999999999988876665543
No 303
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=32.55 E-value=3.1e+02 Score=23.21 Aligned_cols=69 Identities=14% Similarity=0.031 Sum_probs=37.1
Q ss_pred chHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccchHHHHHHHH
Q 045410 28 WRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGRFRTLLYGSI 104 (589)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~l~~~~~ 104 (589)
.+.+.......+........+.+.+ ....++++....+... ....++.+++|+++-|. -++|-.+.|..
T Consensus 4 ~~~vl~g~~~~~~~tl~~~l~~a~l----l~~~~~~e~~~~~~~~---~i~~ls~~~GG~~a~~~-~~~kG~l~G~~ 72 (116)
T PF12670_consen 4 LSAVLKGLLVAYIITLILLLLLALL----LYFTSLSESILPWLVV---IIYILSVFIGGFYAGRK-AGSKGWLHGLL 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHcCCCHHHHHHHHH---HHHHHHHHHHHHHHHHH-HccchHHHHHH
Confidence 3444444444444444433333322 2234566666665544 46677788899998886 44444444544
No 304
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.20 E-value=4.9e+02 Score=29.85 Aligned_cols=47 Identities=19% Similarity=0.089 Sum_probs=33.7
Q ss_pred hhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhcc
Q 045410 90 DTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGG 156 (589)
Q Consensus 90 Dr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 156 (589)
|++-||.+-++++.++++++++...+.. ..++.+..+.++.+++.++
T Consensus 51 ~~~~~R~~~l~it~~~f~i~sl~v~ll~--------------------~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 51 DRLTGRLKNLIITLSCFSIASFLVQLLF--------------------PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------cchHHHHHHHHHHHHHHHH
Confidence 3444678899999999988888877654 1567777777777766554
No 305
>COG3619 Predicted membrane protein [Function unknown]
Probab=30.70 E-value=5e+02 Score=25.04 Aligned_cols=63 Identities=11% Similarity=0.023 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHH-------hcCCchhHHHHHHHHHHHHHHhhhhhhhHHhhhcccc
Q 045410 32 KYILGNETFEKLASMSLIANMTVYLRT-------KYNMDGILLVNVVSIWGGSSSLTAIPGALLSDTYLGR 95 (589)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~-------~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr 95 (589)
.+.+...+.+.++|....-.+..+.+. .+.-++...........+...++...+..+..|. .|
T Consensus 15 lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~-~~ 84 (226)
T COG3619 15 LLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRA-TR 84 (226)
T ss_pred HHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 334456666666654433333333221 2223355555666666667777766666666663 54
No 306
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=29.93 E-value=5.8e+02 Score=29.29 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=33.0
Q ss_pred hhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhcc
Q 045410 90 DTYLGRFRTLLYGSIASFLGMGIMTLTASIPKLRPPDCTGAQCPQPEGWQLSILYAGLALLAIGSGG 156 (589)
Q Consensus 90 Dr~~Grr~~l~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 156 (589)
|++-||.+-++++.+++.++++...+.. ..+|++..+.++.+++.++
T Consensus 51 ~~~~~R~~~l~~t~~~f~i~sl~v~ll~--------------------~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 51 DRLTGRLKNVIFTLICFSIASFSVELLF--------------------GKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHh--------------------cCcHHHHHHHHHHHHHHHH
Confidence 3444677888888888888877766644 1567787777777776554
No 307
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=28.71 E-value=8.1e+02 Score=26.87 Aligned_cols=64 Identities=13% Similarity=0.014 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhhccccccHHHHhhccCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Q 045410 142 ILYAGLALLAIGSGGIRPCNIAFGADQFDTTTPKGKSQLESFFNWWYFSFTVALVVALTAVVYIQTNVSW 211 (589)
Q Consensus 142 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 211 (589)
.+++.-++..+..-.++....++-+.+.+|. -=++.|++.+...|+|+-....+.-++.|.+.+
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~------IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~ 470 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPA------IGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTV 470 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcc------cchHHHHHHHHHHhcCCCchHHHHHHHhhhccc
Confidence 3444445666777777888888888887763 344678888888898887777666666665443
No 308
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.42 E-value=1.7e+02 Score=23.71 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchh
Q 045410 186 WWYFSFTVALVVALTAVVYIQTNVSWI 212 (589)
Q Consensus 186 ~~~~~~~~g~~~~~~~~~~l~~~~g~~ 212 (589)
++.....+|+++|-+ .|+..+.++|-
T Consensus 27 ~~q~ilti~aiVg~i-~Gf~~Qqls~t 52 (101)
T KOG4112|consen 27 FQQLILTIGAIVGFI-YGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 455577889988864 46777777774
No 309
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=26.16 E-value=44 Score=29.03 Aligned_cols=19 Identities=5% Similarity=-0.132 Sum_probs=8.2
Q ss_pred hHhHHHHHHHHHHHHHHHH
Q 045410 212 ILGFAIPTGCFFLSIVVFL 230 (589)
Q Consensus 212 ~~~f~~~~~~~~i~~~~~~ 230 (589)
||++++.+++.++.+++++
T Consensus 1 RW~l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLF 19 (130)
T ss_pred CeeeHHHHHHHHHHHHHHH
Confidence 4555544444433333333
No 310
>PRK11588 hypothetical protein; Provisional
Probab=25.09 E-value=9.3e+02 Score=26.35 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=18.6
Q ss_pred hhhHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 045410 394 YERVFVPLSQKMTGKKIRLTMRQRITIGILMAILSLLVAGFVE 436 (589)
Q Consensus 394 ~~~~~~~~~~k~~~k~~~~~~~~~i~~g~~l~~i~~l~~~~~~ 436 (589)
++..+.++.+|+++|. ...+.+-+++++++-..++..+
T Consensus 132 i~~~i~~l~~k~~~~~-----~llIpil~~lFsl~G~~~G~~E 169 (506)
T PRK11588 132 IDNGILALIRKTRGNE-----ILFIPVLFILFSLGGAVFGMGE 169 (506)
T ss_pred HHHHHHHHHHHhCCCc-----EEeHHHHHHHHHHHHHHhhhhH
Confidence 3444555567765442 2344445555555544444433
No 311
>PRK11469 hypothetical protein; Provisional
Probab=23.92 E-value=5.9e+02 Score=23.67 Aligned_cols=78 Identities=13% Similarity=0.133 Sum_probs=47.4
Q ss_pred CchHHHHHHHHHHHHHHhHhhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhhh-hhhHHhhhcccchHHHHHHHHH
Q 045410 27 GWRSIKYILGNETFEKLASMSLIANMTVYLRTKYNMDGILLVNVVSIWGGSSSLTAI-PGALLSDTYLGRFRTLLYGSIA 105 (589)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~-~~G~laDr~~Grr~~l~~~~~~ 105 (589)
.++..+.+-..+..+.++. ++.. .-.|.+.......+.+..+....... ++.++.++ +|||.-++.|.++
T Consensus 104 ~~~~~l~LaiAtSiDAlav-Gi~~-------~~~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~-~g~~a~~lgG~iL 174 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAV-GVGL-------AFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSI-IGKKAEILGGLVL 174 (188)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHH-------HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 4566665556666665552 1111 12455566666666666555554444 55556666 6999999888888
Q ss_pred HHHHHHHH
Q 045410 106 SFLGMGIM 113 (589)
Q Consensus 106 ~~~~~~~~ 113 (589)
..+|.-++
T Consensus 175 I~iGi~il 182 (188)
T PRK11469 175 IGIGVQIL 182 (188)
T ss_pred HHHHHHHH
Confidence 88876654
No 312
>PF12832 MFS_1_like: MFS_1 like family
Probab=22.49 E-value=2.7e+02 Score=21.59 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=17.9
Q ss_pred cccchhhHHHHHHHHHhhhhHHHHhhhhhcCC
Q 045410 377 GWMGLISMLTLSTWIFFYERVFVPLSQKMTGK 408 (589)
Q Consensus 377 ~~~~~i~~~~~~~~~~l~~~~~~~~~~k~~~k 408 (589)
+.+..+.++..++..|+++.+ .||.+++
T Consensus 38 Gil~~i~~~~~~~~~pl~g~l----aDk~~~~ 65 (77)
T PF12832_consen 38 GILSAIRPLIRFLAPPLWGFL----ADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHCcc
Confidence 344555566677777887776 6666544
No 313
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=22.27 E-value=7.2e+02 Score=24.63 Aligned_cols=18 Identities=33% Similarity=0.102 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHHhhcc
Q 045410 139 QLSILYAGLALLAIGSGG 156 (589)
Q Consensus 139 ~~~~~~~~~~l~g~g~g~ 156 (589)
+++.+.+..++.+++.++
T Consensus 22 ~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 22 YPWLLILVLALLTFFFGM 39 (284)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 456676666666666554
No 314
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=21.43 E-value=8e+02 Score=26.50 Aligned_cols=8 Identities=38% Similarity=0.659 Sum_probs=4.2
Q ss_pred hhhhhcCC
Q 045410 401 LSQKMTGK 408 (589)
Q Consensus 401 ~~~k~~~k 408 (589)
+.+|+++|
T Consensus 107 l~k~l~~~ 114 (465)
T PF03606_consen 107 LIKPLKGK 114 (465)
T ss_pred HHHHhcCC
Confidence 35666544
Done!