BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045417
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 216 bits (550), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 130/170 (76%), Gaps = 9/170 (5%)
Query: 17 LSLLLLMLLVANALPLSLAQRSPESPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSI 76
L ++ L++L + L S +Q P + PY+ + SP++A+I+V+LI+ALFFMGFFSI
Sbjct: 13 LPIVFLLILSSADLAASQSQPGPTN----QPYNYGRLSPAMAVIVVILIAALFFMGFFSI 68
Query: 77 YIRHCSDSSNSVIRPSGAGGNRSR---RGAARGLDREVIDTFPTFVYSDVKTLKVGKGAL 133
Y RHCS ++ + P AGG RSR AARGLD V++TFPTF+YSDVKT K+GKG L
Sbjct: 69 YFRHCSGVPDAGVSP--AGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGEL 126
Query: 134 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASE 183
ECA+CLNEFEDDETLRL+PKCDHVFHP CIDAWLE+H TCPVCR+NLA +
Sbjct: 127 ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQ 176
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 114/140 (81%), Gaps = 2/140 (1%)
Query: 46 DPYS-NMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNR-SRRGA 103
DPY+ + SP++A+++VV+I+ALFFMGFF++YIRHC+ + + + P+G R +
Sbjct: 33 DPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATV 92
Query: 104 ARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECI 163
ARGLD E I+TFPTFVYS+VKT K+GKGALECA+CLNEFEDDETLRL+PKCDHVFHP CI
Sbjct: 93 ARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCI 152
Query: 164 DAWLESHTTCPVCRSNLASE 183
AWL+ H TCPVCR+NLA +
Sbjct: 153 GAWLQGHVTCPVCRTNLAEQ 172
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 176 bits (446), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 104/136 (76%), Gaps = 3/136 (2%)
Query: 52 KFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVI--RPSGAGGN-RSRRGAARGLD 108
+F P++AI+++VL+S FF+GFFS+YIR C + + P+ AG + R ARGLD
Sbjct: 58 RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117
Query: 109 REVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLE 168
+I+TFPTF YS VKTL++GK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177
Query: 169 SHTTCPVCRSNLASEP 184
SHTTCP+CR++L P
Sbjct: 178 SHTTCPLCRADLIPVP 193
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 99/142 (69%), Gaps = 5/142 (3%)
Query: 46 DPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAG-GN--RSRRG 102
D FSP+ AII++VL+S F +G S+Y+R C +++ SG G GN R+
Sbjct: 28 DDEGRTSFSPTTAIIMIVLVSVFFALGCISVYMRRCL--QHALGMDSGGGPGNWLNVRQT 85
Query: 103 AARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPEC 162
GLD VI+TFPTF YS VKTL++GK ALEC VCLNEFEDDETLRLIP+C HVFHP C
Sbjct: 86 TEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGC 145
Query: 163 IDAWLESHTTCPVCRSNLASEP 184
IDAWL S TTCP+CR+NL P
Sbjct: 146 IDAWLRSQTTCPLCRANLVPVP 167
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 6/130 (4%)
Query: 57 LAIIIVVLISALFFMGFFSIYIRHCSD--SSNSVIRPSGAGGN----RSRRGAARGLDRE 110
+ ++I VL +FFM F SI+ R + S +S+ R + A R RR ARGLD E
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110
Query: 111 VIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESH 170
I+TFPTF+YS+VK +++GKG +ECAVCL EFEDDETLRL+P C HVFH +C+D WL H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 171 TTCPVCRSNL 180
+TCP+CR++L
Sbjct: 171 STCPLCRADL 180
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 88/134 (65%), Gaps = 8/134 (5%)
Query: 54 SPSLAIIIVVLISALFFMGFFSIYIRHCS----DSSNSVIRPSGAGGNRSRRGAARGLDR 109
+PS + VL++ F G S+YIRHC+ DSS R G+ SRRG GLD
Sbjct: 43 TPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRANDGS-SRRG---GLDN 98
Query: 110 EVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLES 169
V+++FP F YS VK K+G LECA+CLNE ED ET+RL+P C+H+FH +CID WL S
Sbjct: 99 AVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYS 158
Query: 170 HTTCPVCRSNLASE 183
H TCPVCRSNL ++
Sbjct: 159 HATCPVCRSNLTAK 172
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 104/170 (61%), Gaps = 13/170 (7%)
Query: 19 LLLLMLLVANALPLSLAQRSPESPGSVDPYSNMKFSPSLAIIIVVLISALFF-MGFFSIY 77
LLLL+L V+ Q P + + PY + + A+II +L+ L F M +
Sbjct: 17 LLLLVLQVS-------GQHQPRT--TAPPYIAQRPNQVPAVIIAMLMFTLLFSMLACCVC 67
Query: 78 IRHCSDSSNSVIRPSGAGGNRS---RRGAARGLDREVIDTFPTFVYSDVKTLKVGKGALE 134
++ + S + + GG+ R +RGL ++VI++FP+F+YS VK LK+GKG +E
Sbjct: 68 YKYTNTSPHGTSSDTEEGGHGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVE 127
Query: 135 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEP 184
CA+CLNEFED+ETLRL+P C H FH CID WL S +TCPVCR++L +P
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKP 177
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 86/127 (67%), Gaps = 4/127 (3%)
Query: 58 AIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRGAARGLDREVIDTFPT 117
+II +V+++ +G S + HC + AG + A RGL++EVI++FPT
Sbjct: 50 SIIAIVVLAIFISLGMVSCCL-HCIFYREEI---GAAGQDVLHSRARRGLEKEVIESFPT 105
Query: 118 FVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCR 177
F+YS+VK LK+GKG +ECA+CL+EFED ETLR +P C H FH CID WL S +TCPVCR
Sbjct: 106 FLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165
Query: 178 SNLASEP 184
+NL+ +P
Sbjct: 166 ANLSLKP 172
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 90/144 (62%), Gaps = 4/144 (2%)
Query: 45 VDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDS--SNSVIRPSGAGGNRSRRG 102
V P + +K S ++I +++ A+F +G S+ R S S I P SR
Sbjct: 2 VQPGTEIKASDLTLLVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTS 61
Query: 103 --AARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHP 160
A RGLD +I++FPTF+YS+VK ++G G +ECAVC+ EFED ETLRL+P+C HVFH
Sbjct: 62 ITAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHA 121
Query: 161 ECIDAWLESHTTCPVCRSNLASEP 184
+C+ WL H+TCP+CR +L +P
Sbjct: 122 DCVSVWLSDHSTCPLCRVDLCLQP 145
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 44 SVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRGA 103
SVD F P+ +I +++++ + + ++ + +R+RRG
Sbjct: 37 SVDRNRKTNF-PTETVIAIIVLAIFISLSMVACFLHKTFYRAEVEAASQEVFHSRARRG- 94
Query: 104 ARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECI 163
L++E++++FP F+YS+VK LK+GKG +ECA+CL+EF D ETLR +P C H FH CI
Sbjct: 95 ---LEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCI 151
Query: 164 DAWLESHTTCPVCRSNLASEP 184
D WL S +TCP CR+NL+ +P
Sbjct: 152 DVWLSSQSTCPACRANLSLKP 172
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 41 SPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS-DSSNSVIRPSGAGGNRS 99
SP + P +P L +I+ V++ FF+GFF++Y C D+ R G S
Sbjct: 7 SPLAPQPPQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGDTVS 66
Query: 100 RRGAAR--------GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLI 151
+ GL+ +I++FPTF YS VK L+ K LECA+CL EF+ D LRL+
Sbjct: 67 DNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLL 126
Query: 152 PKCDHVFHPECIDAWLESHTTCPVCRSNL 180
C HVFH ECID W ESH TCPVCR +L
Sbjct: 127 TTCYHVFHQECIDLWFESHRTCPVCRRDL 155
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%)
Query: 105 RGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECID 164
RG+D++VI++FP F+YS+VK K+G G +ECA+CL EFED+E LR +P C H FH CID
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 165 AWLESHTTCPVCRSNLA 181
WL S +TCPVCR+NL+
Sbjct: 150 EWLSSRSTCPVCRANLS 166
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 84/140 (60%), Gaps = 8/140 (5%)
Query: 53 FSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRS-------RRGAAR 105
F+P+ +++V LI+A + FS+ I C+ + R + + A+R
Sbjct: 43 FTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASR 102
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGK-GALECAVCLNEFEDDETLRLIPKCDHVFHPECID 164
GLD+EV++ FPT VY DVK K G LECAVCL EF D + LR++P C HVFHP+CID
Sbjct: 103 GLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCID 162
Query: 165 AWLESHTTCPVCRSNLASEP 184
WL + TCP+CR+NL + P
Sbjct: 163 PWLAAAVTCPLCRANLTAPP 182
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 15/157 (9%)
Query: 38 SPESPGSVDPYSNMKFS-PSLAIIIVVLISALFFMGFFSIYIRHC-----SDSSNSVIRP 91
P + + PY +S P L II+ V++ +FF+GFF+IY C +++ N
Sbjct: 5 KPINQNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYH- 63
Query: 92 SGAGGNRSRRGAAR-------GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFED 144
+G N+ + GL+ +I ++P F +S VK L+ K LECA+CL EFE+
Sbjct: 64 NGLPENQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEE 123
Query: 145 DETL-RLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 180
+ L RL+ C HVFH ECID WLES+ TCPVCR NL
Sbjct: 124 EHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNL 160
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%)
Query: 99 SRRGAARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVF 158
S R RGLD E I +FP+FVY++ + ++ G G LEC VCLNEF+DDETLRL+P C HVF
Sbjct: 49 SPRRPPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVF 108
Query: 159 HPECIDAWLESHTTCPVCRSNL 180
H +C+D WL +TCP+CR+ +
Sbjct: 109 HADCVDIWLSHSSTCPICRAKV 130
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 22/141 (15%)
Query: 56 SLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRGA------------ 103
++A+ I +L+ ALFFMGFFS+Y RH +DSS+S + S RS R +
Sbjct: 49 TMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSR 108
Query: 104 ----ARGLDREVIDTFPTFVYSDVKTLKVGKGALE-CAVCLNEFEDDETLRLIPKCDHVF 158
RGLD + + + P + Y+ K K E C +CL++FE+ ET+++IP C HVF
Sbjct: 109 PYSFRRGLDSQAVRSLPVYRYT-----KAAKQRNEDCVICLSDFEEGETVKVIPHCGHVF 163
Query: 159 HPECIDAWLESHTTCPVCRSN 179
H +C+D WL S+ TCP+CRSN
Sbjct: 164 HVDCVDTWLSSYVTCPLCRSN 184
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 82/142 (57%), Gaps = 17/142 (11%)
Query: 53 FSPSLAIIIVVLISALFFMGF--------FSIYIRHCSDSSNSVIRPSGAGG---NRSRR 101
F PSLAII V S +F + F F +R +DS IR NRS R
Sbjct: 37 FKPSLAIITGVF-SIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRSSR 95
Query: 102 GAARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPE 161
+ GLD++ I++ P F +S +K LK G LEC+VCL++FED E LRL+PKC H FH
Sbjct: 96 FS--GLDKKAIESLPFFRFSALKGLKQG---LECSVCLSKFEDVEILRLLPKCRHAFHIG 150
Query: 162 CIDAWLESHTTCPVCRSNLASE 183
CID WLE H TCP+CR+ + E
Sbjct: 151 CIDQWLEQHATCPLCRNRVNIE 172
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 20/138 (14%)
Query: 55 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVI--RPSGAGGNRS------------- 99
P +A++I VL + +Y++HC + SV P R
Sbjct: 56 PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 115
Query: 100 RRGAARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFH 159
R+ + G+DR VI++ P F + L K LECAVCL FE E LRL+PKC H FH
Sbjct: 116 RKNS--GIDRSVIESLPVFRFG---ALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFH 170
Query: 160 PECIDAWLESHTTCPVCR 177
EC+D WL++H+TCP+CR
Sbjct: 171 VECVDTWLDAHSTCPLCR 188
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
G+D+ +IDT P F Y + LK+ +C VCL EFE ++ LRL+PKC H FH ECID
Sbjct: 99 GVDQSLIDTLPVFHYKSIVGLKIS--PFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 166 WLESHTTCPVCRSNLAS 182
WL SH+TCP+CRSNL S
Sbjct: 157 WLLSHSTCPLCRSNLLS 173
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 91/176 (51%), Gaps = 33/176 (18%)
Query: 30 LPLSLAQRSPESPGSVDPYSN----MKFSPSLAIIIVVLISALFFMGF-FSIYIRHCSDS 84
LPL + S ++P P+ N F PSLA++ VL + +F + F +Y + C
Sbjct: 9 LPLLHSYASAQTP---PPFRNGDLVANFEPSLAVVTGVL-AIMFALTFVLLVYAKCCH-- 62
Query: 85 SNSVIRPSGAGG--------------NRSRRGAAR--GLDREVIDTFPTFVYSDVKTLKV 128
+ SG+G NRS + R GLD+ I++ P F +S LK
Sbjct: 63 ---IDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFS---ALKG 116
Query: 129 GKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEP 184
K L+C+VCL++FE E LRL+PKC H FH CID WLE H TCP+CR ++ E
Sbjct: 117 SKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEE 172
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 103 AARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPEC 162
A+RGLD VI + P F +SD + K +ECAVCL+EFE+ ET R++P C H FH +C
Sbjct: 91 ASRGLDPNVIKSLPVFTFSD----ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDC 146
Query: 163 IDAWLESHTTCPVCRSNLAS 182
ID W SH+TCP+CRS + S
Sbjct: 147 IDMWFHSHSTCPLCRSLVES 166
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 21/169 (12%)
Query: 31 PLSLAQRSPESPGSVDPYSNMKFSPSLAIIIVVLISALFFM-GFFSIYIRH--------- 80
P++L + +S S N + SP + + I+VL+S +FF+ + +R+
Sbjct: 27 PITLNHQLTDSSSSSSSGGNNRISP-IILFIIVLLSVIFFICSILHLLVRYYLKKKRSNL 85
Query: 81 CSDSSNSVIRPSGAGGNRSRRGAAR-------GLDREVIDTFPTFVYSDVKTLKVGKGAL 133
S + S P + + +R + GLD+ +ID P F+Y K +K K
Sbjct: 86 SSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLY---KEIKGTKEPF 142
Query: 134 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLAS 182
+CAVCL EF +D+ LRL+P C H FH +CID WL S++TCP+CR L S
Sbjct: 143 DCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 35 AQRSPESPGSV-DPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS--DSSNSVIRP 91
A +P+ G + D Y + LA ++ LI AL +R S + V
Sbjct: 14 ANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNA 73
Query: 92 SGAGGNRSRRGAARGLDREVIDTFPTFVY-SDVKTLKVGKGALECAVCLNEFEDDETLRL 150
S A N R AA GL ++ + P +Y S + +K A EC +CL +FED E +R+
Sbjct: 74 SNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMK----ATECLICLGDFEDGEKVRV 129
Query: 151 IPKCDHVFHPECIDAWLESHTTCPVCRSNLASE 183
+PKC+H FH CID WL S ++CP CR +L E
Sbjct: 130 LPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLE 162
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 55 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSV----IRPSGAGGN----RSRRGAARG 106
P LAI ++ +++ F + + I++ C + + + R + N S RG
Sbjct: 42 PILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRG 101
Query: 107 LDREVIDTFPTFVYSDVKTL----KVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPEC 162
LD I P F + + K + EC+VCLNEF++DE LR+IP C HVFH +C
Sbjct: 102 LDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDC 161
Query: 163 IDAWLESHTTCPVCRSNLASE 183
ID WL+ + CP+CR++++ E
Sbjct: 162 IDIWLQGNANCPLCRTSVSCE 182
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
GLD+ ID P F+Y +V T+ + + +CAVCLNEF D + LRL+P C H FH CID
Sbjct: 180 GLDQTAIDALPVFLYGNV-TISLEQ-PFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDT 237
Query: 166 WLESHTTCPVCRSNLAS 182
WL S++TCP+CR +L++
Sbjct: 238 WLLSNSTCPLCRRSLST 254
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 75/149 (50%), Gaps = 23/149 (15%)
Query: 54 SPSLAIIIVVLIS----ALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRGAARG--L 107
S SL I ++ I+ A+ GFF + + SDS N V + + N
Sbjct: 77 SSSLDAISIITITGAVLAILLTGFF-LVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQ 135
Query: 108 DREVIDTFPTFVYSDVK------------TLKVGKGALE---CAVCLNEFEDDETLRLIP 152
DRE +D P ++ K G G +E C VCLNEFE+DE+LRL+P
Sbjct: 136 DREQVD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLP 194
Query: 153 KCDHVFHPECIDAWLESHTTCPVCRSNLA 181
KC+H FH CID WL SHT CP+CR+ +A
Sbjct: 195 KCNHAFHISCIDTWLSSHTNCPLCRAGIA 223
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
G+D+ IDT P F Y + LK +CAVCL EFE ++ LRL+PKC H FH +CID
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLK--NYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 166 WLESHTTCPVCR 177
WL SH+TCP+CR
Sbjct: 165 WLLSHSTCPLCR 176
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 41 SPGSVDPYSNMKFSPSLAIIIVVLISALF----FMGFFSIYIRH-----CSDSSNSVIRP 91
S S+D PS+++ + V+++ + F GFFS+++ + N P
Sbjct: 3 STTSIDSIPATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTP 62
Query: 92 SGAGGNRSRRGAARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLI 151
G + + GLD +I +FP F YS G ECA+CL+EF D++T+RLI
Sbjct: 63 YGDLIHVATPPENTGLDPFIIRSFPVFHYSSATKKNHGT---ECAICLSEFSDEDTVRLI 119
Query: 152 PKCDHVFHPECIDAWLESHTTCPVCRSNL 180
C H FH CID W E H TCPVCR L
Sbjct: 120 TVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 23/150 (15%)
Query: 55 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRG------------ 102
P LA+ ++ +++ F + + +++ C + + + +R RR
Sbjct: 35 PILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPEL 94
Query: 103 AARGLDREVIDTFPTF-----------VYSDVKTLKVGKGALECAVCLNEFEDDETLRLI 151
+RGLD VI P F V++ + K + EC+VCL+EF+D+E LR+I
Sbjct: 95 RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154
Query: 152 PKCDHVFHPECIDAWLESHTTCPVCRSNLA 181
P C H+FH +CID WL+++ CP+CR+ ++
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCRTRVS 184
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YSNMKFSPSLAIIIVVLISALFFMGFFSIYIR-HCSDSSNSVIRPSGAGGNRSRRGAARG 106
+ N S + ++++ L + F+ I IR + S+ +S I + A RG
Sbjct: 233 FINGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQPREVMARRG 292
Query: 107 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAW 166
LD+ I+TF + + L G + C +CL+E+ ET+R IP+CDH FH ECID W
Sbjct: 293 LDQSTIETFKKMELGESRRLS-GTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVW 351
Query: 167 LESHTTCPVCRSNLA 181
L+ H +CP+CR++ A
Sbjct: 352 LKIHGSCPLCRNSCA 366
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 32/157 (20%)
Query: 52 KFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRGAA------- 104
+ SP++ +IV+L F G + +R + PS +RS R
Sbjct: 40 RISPAVLFVIVILAVLFFISGLLHLLVRFL------IKHPSATASSRSNRFPEISTSDAL 93
Query: 105 ------------RGLDREVIDTFPTFVYSDV-------KTLKVGKGALECAVCLNEFEDD 145
GLD+ ID P F Y ++ + +CAVCL EF +
Sbjct: 94 QRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEK 153
Query: 146 ETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLAS 182
+ LRL+P C H FH CID WL+S++TCP+CR L S
Sbjct: 154 DKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS 190
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 88 VIRPSGAGGNRSRRGAAR-GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDE 146
V R SG+ ++ AR GLD I+++ + + L G + C +CL+E+ E
Sbjct: 279 VARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKE 338
Query: 147 TLRLIPKCDHVFHPECIDAWLESHTTCPVCRSN 179
T+R +P+C+H FH ECIDAWL+ H++CPVCRSN
Sbjct: 339 TVRCLPECEHCFHTECIDAWLKLHSSCPVCRSN 371
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 60 IIVVLISALFFMGFFSIYIRHC------SDSSNSVIRPSGAGGNRSRR---GAARGLDRE 110
+I +L SAL + ++++ ++C S S + +G G S + GL+
Sbjct: 61 LIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES 120
Query: 111 VIDTFPTFVYSDVKTLKVGKGALE---CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWL 167
+I + + Y K G G ++ C+VCL+EFE++E+LRL+PKC+H FH CID WL
Sbjct: 121 MIKSITVYKY------KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWL 174
Query: 168 ESHTTCPVCRS 178
+SH+ CP+CR+
Sbjct: 175 KSHSNCPLCRA 185
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 49 SNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS-DSSNSVIRPSGAGG-----NRSRRG 102
SN SP + I + +A ++++ ++C+ D++N SG N RG
Sbjct: 54 SNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERG 113
Query: 103 ----------AARGLDREVIDTFPTFVYSDVKT-LKVGKGALECAVCLNEFEDDETLRLI 151
+ GLD +I F + K+ +C++CL EF +DE+LRL+
Sbjct: 114 DQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKIN--GTDCSICLGEFNEDESLRLL 171
Query: 152 PKCDHVFHPECIDAWLESHTTCPVCRSNL 180
PKC+H FH CID WL+SH+ CP+CR+ +
Sbjct: 172 PKCNHTFHVVCIDRWLKSHSNCPLCRAKI 200
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 32/163 (19%)
Query: 44 SVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIR------------- 90
S D S FSP + II VL SA + +++ ++C S+ R
Sbjct: 46 SADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGG 105
Query: 91 ----PSGAGGNRSRRGAA------RGLDREVIDTFPTFVYSDVKTLKVGKG---ALECAV 137
G +SR + GLD +I+ Y + G G +C+V
Sbjct: 106 GAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKY------RRGDGFVHTTDCSV 159
Query: 138 CLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 180
CL EF D E+LRL+P+C H FH +CID WL+SH+ CP+CR+N+
Sbjct: 160 CLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGKGAL---ECAVCLNEFEDDETLRLIPKCDHVFHPEC 162
GL R I++ V K G+G + EC+VCLNEFE+DE+LRL+PKC H FH C
Sbjct: 109 GLHRSAINSIT------VVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNC 162
Query: 163 IDAWLESHTTCPVCRS 178
ID WL SH CP+CR+
Sbjct: 163 IDTWLLSHKNCPLCRA 178
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
GL+ +I + P F +S V L A+EC+VCL+EF+D+E+ R++P C H FH CID
Sbjct: 51 GLNPSIIKSLPIFTFSAVTAL----FAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDM 106
Query: 166 WLESHTTCPVCRSNL 180
W SH++CP+CRS +
Sbjct: 107 WFHSHSSCPLCRSQI 121
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 14/105 (13%)
Query: 88 VIRPSGAGGNRSRRG---------AARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVC 138
++R NR+R GLD ++I++FP + YS VK G +C++C
Sbjct: 103 LMRIWNNHRNRNRPSNLIQPSNPPENLGLDSKIIESFPEYPYS-VK----DHGTDQCSIC 157
Query: 139 LNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASE 183
L EF DD+T+RLI C+H FH CID W E H TCPVCR L E
Sbjct: 158 LTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVE 202
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 47 PY-SNMKFSPSLAIIIVVLISALFF-MGFFSIYIRHCSDSSNSVIRPSGAGG-NRSRRGA 103
PY + F ++ +++ VL+ AL +G SI IR SN V PS AGG N R
Sbjct: 45 PYVGDNNFDANVVMVLSVLLCALVCSLGLNSI-IRCALRCSNLV--PSEAGGDNYPVRLT 101
Query: 104 ARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECI 163
G+ R+ + +F T YS L + ECA+CL+EF +E ++L+P C H FH CI
Sbjct: 102 NTGVKRKALKSFQTVSYS--TELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCI 159
Query: 164 DAWLESHTTCPVCRSNL 180
D WL SH++CP CR L
Sbjct: 160 DKWLSSHSSCPTCRHCL 176
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 23/167 (13%)
Query: 24 LLVANALP-LSLAQRSPESPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS 82
LL A P +S +P + G D SN K S+ +V++++AL ++ I
Sbjct: 5 LLATQATPTISATDANPRTLG--DSVSNNKNIASMDTHMVIILAALLCALICALGI---- 58
Query: 83 DSSNSVIRPSGAGGNR---------SRRGAARGLDREVIDTFPTFVYSDVKTLKVGKGAL 133
NSV+R R + A+G+ + + P YS +K A
Sbjct: 59 ---NSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMK----AT 111
Query: 134 ECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 180
EC +CL +F + ET+R++PKC+H FH +CID WL SH++CP CR +L
Sbjct: 112 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 105 RGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECID 164
+ LD+ V+D P FVYS K + EC+VCL+EFE+++ RL+PKC H FH +CID
Sbjct: 79 QALDQAVLDKIPIFVYSS-KNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCID 137
Query: 165 AWLESHTTCPVCRS 178
W S +TCP+CR+
Sbjct: 138 TWFRSRSTCPLCRA 151
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 51 MKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGG----NRSRRGAARG 106
+KF+ + + I V++ L + YI +SN+ + S GG N + A G
Sbjct: 20 LKFTFIVCVPICVILIVLLVL-----YIMR--RNSNTNVDWSSLGGFVPTNNNLSTAELG 72
Query: 107 LDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAW 166
L +++ + P +Y + T+ +C+VCL +++ +E L+ +P C H FH ECID W
Sbjct: 73 LSKDIREMLPIVIYKESFTV----NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 128
Query: 167 LESHTTCPVCRSNLASEP 184
L SHTTCP+CR +L +P
Sbjct: 129 LTSHTTCPLCRLSLIPKP 146
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 39 PESPGSVDPYSNMKFSPSLAIIIVVLISALFFMGF--FSIYIRHCSDSSNSVIRPSGAGG 96
PE+ + + K A I V I F + F + IY+R S ++ GG
Sbjct: 12 PETYAPSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGG 71
Query: 97 -----NRSRRGAARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLI 151
N + A GL +++ + P +Y + +K + C+VCL +++ +E L+ +
Sbjct: 72 TFVPTNNNLSTAELGLSKDIREMLPVVIYKESFIVKDSQ----CSVCLGDYQAEEKLQQM 127
Query: 152 PKCDHVFHPECIDAWLESHTTCPVCRSNLASEP 184
P C H FH ECID WL SHTTCP+CR +L +P
Sbjct: 128 PSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKP 160
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 56 SLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRG--AARGLDREVID 113
++ I + ++ + + F+ +I I + + + + A + R A RGLD+ I+
Sbjct: 236 AVLICLSIIGAVILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQSTIE 295
Query: 114 TFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTC 173
+ T + + G + C +CL+E+ ET+R IP+CDH FH +CID WL+ H +C
Sbjct: 296 KYKTMELGESRR-PPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSC 354
Query: 174 PVCRSNLA 181
P+CR++ A
Sbjct: 355 PLCRNSRA 362
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 17/133 (12%)
Query: 57 LAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRGAARG---------- 106
LA +I++ ++ + + F S Y R N IR + RS AAR
Sbjct: 30 LASVIILFVAVILILCFHS-YARWLFRRQNRRIRRRISAHLRSL-AAARDPTQSSSSLSP 87
Query: 107 LDREVIDTFPTFVYSDVKTLKVGKGALE-CAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
LD V++ P FVYS +K + LE C+VCL+EFE+D+ R++PKC HVFH +CID
Sbjct: 88 LDPTVLEKIPIFVYS----VKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDT 143
Query: 166 WLESHTTCPVCRS 178
W S ++CP+CR+
Sbjct: 144 WFRSRSSCPLCRA 156
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 106 GLDREVIDTFPTFVYSDVKTL---KVGKGAL----ECAVCLNEFEDDETLRLIPKCDHVF 158
GLD VI T P F+YS VGK + +CAVCL EFE+ + +R +P C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 159 HPECIDAWLESHTTCPVCRSNL 180
H ECID WL SH CP+CR+ +
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAI 201
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 50 NMKFSPSLAIIIVVLISALFFMGFFSIYIRHC--SDSSNSVIR--PSGAGGNRSRRGAAR 105
+ + ++A+ I+VLIS + + I + ++++ V+ PS A +
Sbjct: 12 GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAEVK------L 65
Query: 106 GLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 165
GLDR VI+++P V D + L C++CL ++E E +R IP+C+H FH +C+D
Sbjct: 66 GLDRPVIESYPRIVLGDSRRLPRPNNG-PCSICLCDYEAREPVRCIPECNHCFHTDCVDE 124
Query: 166 WLESHTTCPVCRSNLA 181
WL + TCP+CR++ A
Sbjct: 125 WLRTSATCPLCRNSPA 140
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 27/148 (18%)
Query: 55 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPSGAGGNRSRRG------------ 102
P L +I +L SA + ++++ ++C ++ S A NR
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNN 117
Query: 103 ------------AARGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRL 150
GLD +I + + Y + +C+VCL+EF+++E+LRL
Sbjct: 118 GATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESS---DCSVCLSEFQENESLRL 174
Query: 151 IPKCDHVFHPECIDAWLESHTTCPVCRS 178
+PKC+H FH CID WL+SH+ CP+CR+
Sbjct: 175 LPKCNHAFHVPCIDTWLKSHSNCPLCRA 202
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 111 VIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESH 170
V+D+ P F +S V + +CAVCL++FE ++ LRL+P C H FH +CID WL S+
Sbjct: 93 VLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSN 152
Query: 171 TTCPVCRSNL-ASE 183
TCP+CRS L ASE
Sbjct: 153 QTCPLCRSPLFASE 166
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 107 LDREVIDTFPTFVYS-------DVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFH 159
+D EV+ + P VYS + + +ECAVCL E ED E R +P+C H FH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 160 PECIDAWLESHTTCPVCR 177
EC+D WL SH+TCP+CR
Sbjct: 159 AECVDMWLGSHSTCPLCR 176
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,608,537
Number of Sequences: 539616
Number of extensions: 2723683
Number of successful extensions: 8525
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 7973
Number of HSP's gapped (non-prelim): 611
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)