BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045430
(309 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana
GN=VEP1 PE=1 SV=1
Length = 388
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/309 (70%), Positives = 264/309 (85%), Gaps = 6/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
+DT++KLS LTDVTH+FYVTW +R +E+ENCE NG+MLRNVL+++IP APNLRHVCLQTG
Sbjct: 86 EDTRSKLSPLTDVTHVFYVTWTNRESESENCEANGSMLRNVLQAIIPYAPNLRHVCLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPF + R HD PFTED+PRL + NFYYTQEDILFEE++K + ++TWS+HR
Sbjct: 146 TKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIE---TVTWSIHR 201
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P++IFGFSPYS+MN+VGTLCVYAAICKHEG PLLFPGSK WEG+ ASDADLIAEQ IW
Sbjct: 202 PNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGFMTASDADLIAEQQIW 261
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFNC+N D+FKWKHLWK+LAEQF IE YG ++G+ + L E+M+GKE VW
Sbjct: 262 AAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYGF-EEGKNLGLVEMMKGKERVW 320
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
E++VKENQLQ KL EV VWWFAD++L G ++DSMNKSKE+GFLGFRNS NSF++WID
Sbjct: 321 EEMVKENQLQEKKLEEVGVWWFADVIL-GVEGMIDSMNKSKEYGFLGFRNSNNSFISWID 379
Query: 301 KMKTYRIVP 309
K K ++IVP
Sbjct: 380 KYKAFKIVP 388
>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1
SV=1
Length = 389
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/309 (69%), Positives = 250/309 (80%), Gaps = 5/309 (1%)
Query: 1 DDTQAKLSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTG 60
DD+QAKLS LTDVTH+FYVTWA+R TE ENCE N M RNVL +VIPN PNL+H+ LQTG
Sbjct: 86 DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 145
Query: 61 GKHYVGPFESFGKIRPHDTPFTEDLPRLNVTNFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
KHY+GPFES+GKI HD P+TEDLPRL NFYY EDI+ EEVEK++G LTWSVHR
Sbjct: 146 RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG---LTWSVHR 202
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P IFGFSPYSMMN+VGTLCVYAAICKHEG L F G K W+GYS SDADLIAE HIW
Sbjct: 203 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 262
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIENYGLPQDGERVRLEEIMRGKEGVW 240
AAVDPYA+NEAFN SNGDVFKWKH WKVLAEQF + G ++G ++L+++M+GKE VW
Sbjct: 263 AAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV-GCGEYEEGVDLKLQDLMKGKEPVW 321
Query: 241 EQIVKENQLQLTKLSEVAVWWFADMMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWID 300
E+IV+EN L TKL +V +WWF D++L G LDSMNKSKEHGFLGFRNSKN+F++WID
Sbjct: 322 EEIVRENGLTPTKLKDVGIWWFGDVIL-GNECFLDSMNKSKEHGFLGFRNSKNAFISWID 380
Query: 301 KMKTYRIVP 309
K K Y+IVP
Sbjct: 381 KAKAYKIVP 389
>sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1
Length = 405
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 53/345 (15%)
Query: 7 LSKLTDVTHIFYVTWASRPTEAENCEVNGAMLRNVLRSV-IPNAPNLRHVCLQTGGKHYV 65
L + + + ++ + E + CEVNG MLRN ++++ + + LR V L TG K Y
Sbjct: 70 LEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTTGLKFYG 129
Query: 66 GPFESFGKIRPHDTPFTEDLPRLNVT-----NFYYTQEDILFEEVEKRKGPLSLTWSVHR 120
G++R P E R+ T NFYY QEDIL E +K +++
Sbjct: 130 ---LHLGEVR---LPMIETDIRVPETFSGTPNFYYVQEDILKEFSNGKK----WDYTIAM 179
Query: 121 PHIIFGFSPYSMMNVVGTLCVYAAICKHEGVPLLFPGSKDCWEGYSVASDADLIAEQHIW 180
P+ I G S S MN T+ +YA +C+ P FPG++ + G+ S + LIA+ +W
Sbjct: 180 PNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADFQLW 239
Query: 181 AAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFEIE--------NYGLPQDG-------- 224
E FN NGD+ W W +AE F +E ++ L +
Sbjct: 240 MTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVEVPKNQFATDFTLSTEVTLSTPSPI 299
Query: 225 ------------------ERVRLEEIMRGK--EGVWEQIVKENQLQLTKLSEVAVWWFAD 264
++ L++ ++ K + W I + +L L EV W F D
Sbjct: 300 NLYEKELGIKHTPNSKIINQISLQQWVKQKKVQDAWRTIAEREKLNAHAL-EVGTWAFCD 358
Query: 265 MMLDGGFLLLDSMNKSKEHGFLGFRNSKNSFVNWIDKMKTYRIVP 309
+ + ++ SM+K+++ G+ + ++ + F D++K + +P
Sbjct: 359 FLFGRTYNVISSMSKARKLGYTDYYDTFDGFKETFDELKKQKQIP 403
>sp|Q9ZKU4|PTAS_HELPJ Phosphate acetyltransferase OS=Helicobacter pylori (strain J99)
GN=pta PE=3 SV=1
Length = 519
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 29 ENCEVNGAMLRNVLRSVIPNAPNLRHVCLQTGGKHYVGPFESFGKIRPHDTPFTEDLPRL 88
E+ EV GA +++L+++ P + +GG G ES + H + L
Sbjct: 9 EDTEVLGAACKSLLKALKPRYQKIALFSPISGGCEGFGECESLSSLEVHSAIDKQKALEL 68
Query: 89 NVTNFYYTQEDILFEEVEKRKGPLSLTWSVHRPHIIFGFSPYSMMNVVGTLCVYAAICKH 148
T QE++LFE + KR L S H I G++P +N + L + + KH
Sbjct: 69 VST----AQEELLFETILKRYDEL---QSTHDFVINLGYAPKFFLNAL--LDLNTILAKH 119
Query: 149 EGVPLL 154
P++
Sbjct: 120 LNAPVV 125
>sp|Q13RD3|SSUB2_BURXL Aliphatic sulfonates import ATP-binding protein SsuB 2
OS=Burkholderia xenovorans (strain LB400) GN=ssuB2 PE=3
SV=1
Length = 247
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 199 VFKWKHLWK--VLAEQFEIENYGLPQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSE 256
+ W LW+ VL + I G R E + G+E W + + Q Q L+
Sbjct: 99 LLPWATLWENVVLGHETTIGRVG----ATRALAEVGLSGREDDWPRNLSGGQAQRVALAR 154
Query: 257 VAVWWFADMMLDGGFLLLDSMNKSKEHGFL 286
V A ++LD F LD++ + K HG +
Sbjct: 155 GLVRDPALLLLDEPFAALDALTRIKMHGLV 184
>sp|P04802|SYDC_YEAST Aspartate--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DPS1 PE=1 SV=3
Length = 557
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Query: 201 KWKHLWKVLAEQFEIENYGLPQDGERVRLE-----EIMR--GKE-GVWEQIVKENQLQLT 252
++ H +++ +Q+ +E + LP+DG+ VRL E++R GKE G +E + EN+ L
Sbjct: 372 RFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIEMLRAAGKEIGDFEDLSTENEKFLG 431
Query: 253 KL 254
KL
Sbjct: 432 KL 433
>sp|A8MV57|MPTX_HUMAN Putative mucosal pentraxin homolog OS=Homo sapiens GN=MPTX PE=5
SV=2
Length = 137
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 157 GSKDCWEGYSVASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHL 205
G K W+GYSV +A +I Q + + N++F DVF W H+
Sbjct: 52 GRKGVWKGYSVGEEAKIILGQEQDSFGGHFDENQSFVGVIWDVFLWDHV 100
>sp|P89429|PORTL_HHV2H Portal protein UL6 OS=Human herpesvirus 2 (strain HG52) GN=UL6 PE=3
SV=1
Length = 678
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 221 PQDGERVRLEEIMRGKEGVWEQIVKENQLQLTKLSEVAVWWFADM 265
P+ G + +++ G+E +WE + K+ +LQ T L++VA + AD+
Sbjct: 573 PRAGALITGSDVILGEEELWEAVFKKTRLQ-TYLTDVAALFVADV 616
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,806,510
Number of Sequences: 539616
Number of extensions: 5369822
Number of successful extensions: 9545
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9531
Number of HSP's gapped (non-prelim): 10
length of query: 309
length of database: 191,569,459
effective HSP length: 117
effective length of query: 192
effective length of database: 128,434,387
effective search space: 24659402304
effective search space used: 24659402304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)