BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045431
(433 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/426 (80%), Positives = 385/426 (90%), Gaps = 1/426 (0%)
Query: 8 AKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVIS 67
AKR++ CKCVA PQE KI YKTKVSRN N+ KLQAGYLFPEIARR++AH+LKYPDA+VIS
Sbjct: 2 AKRVNTCKCVATPQE-KIEYKTKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVIS 60
Query: 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127
LGIGDTTEPIPEVITSA+AK+++ LST EGYSGYGAEQG KPLRAAIA TFY LGI +
Sbjct: 61 LGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDD 120
Query: 128 DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEY 187
D+FVSDGAKCDISRLQ++FGSNVT+AVQDPSYPAYVDSSVIMGQTG+F D +KYG IEY
Sbjct: 121 DVFVSDGAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180
Query: 188 MRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
MRCT ENGFFPDLSTV RTDIIFFCSPNNPTGAAATREQLT+LV+FAK NGSIIVYDSAY
Sbjct: 181 MRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
Query: 248 ALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDF 307
A+Y+SDDNPRSIFEIPGA+EVA+ET+SFSKYAGFTGVRLGWTVIPK+LL+SDGFPVAKDF
Sbjct: 241 AMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 300
Query: 308 NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK 367
NRI+CTCFNGASNISQAG LACL+PEG +A+H+VIGFYKENT+II++TF SLG+ VYGGK
Sbjct: 301 NRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGK 360
Query: 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKR 427
NAPYVWV FP +SSWDVF+EILEKTHVVTT +RVSAFGHR N+LEAC+R
Sbjct: 361 NAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRR 420
Query: 428 FKHLYK 433
FK LYK
Sbjct: 421 FKQLYK 426
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/426 (80%), Positives = 385/426 (90%), Gaps = 1/426 (0%)
Query: 8 AKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVIS 67
AKR++ CKCVA PQE KI YKTKVSRN N+ KLQAGYLFPEIARR++AH+LKYPDA+VIS
Sbjct: 2 AKRVNTCKCVATPQE-KIEYKTKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVIS 60
Query: 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127
LGIGDTTEPIPEVITSA+AK+++ LST EGYSGYGAEQG KPLRAAIA TFY LGI +
Sbjct: 61 LGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDD 120
Query: 128 DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEY 187
D+FVSDGAKCDISRLQ++FGSNVT+AVQDPSYPAYVDSSVIMGQTG+F D +KYG IEY
Sbjct: 121 DVFVSDGAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180
Query: 188 MRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
MRCT ENGFFPDLSTV RTDIIFFCSPNNPTGAAATREQLT+LV+FAK NGSIIVYDSAY
Sbjct: 181 MRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
Query: 248 ALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDF 307
A+Y+SDDNPRSIFEIPGA+EVA+ET+SFS+YAGFTGVRLGWTVIPK+LL+SDGFPVAKDF
Sbjct: 241 AMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 300
Query: 308 NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK 367
NRI+CTCFNGASNISQAG LACL+PEG +A+H+VIGFYKENT+II++TF SLG+ VYGGK
Sbjct: 301 NRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGK 360
Query: 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKR 427
NAPYVWV FP +SSWDVF+EILEKTHVVTT +RVSAFGHR N+LEAC+R
Sbjct: 361 NAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRR 420
Query: 428 FKHLYK 433
FK LYK
Sbjct: 421 FKQLYK 426
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/426 (80%), Positives = 384/426 (90%), Gaps = 1/426 (0%)
Query: 8 AKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVIS 67
AKR++ CKCVA PQE KI YKTKVSRN N+ KLQAGYLFPEIARR++AH+LKYPDA+VIS
Sbjct: 2 AKRVNTCKCVATPQE-KIEYKTKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVIS 60
Query: 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127
LGIGDTTEPIPEVITSA+AK+++ LST EGYSGYGAEQG KPLRAAIA TFY LGI +
Sbjct: 61 LGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDD 120
Query: 128 DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEY 187
D+FVSDGAKCDISRLQ++FGSNVT+AVQDPSYPAYVDSSVIMGQTG+F D +KYG IEY
Sbjct: 121 DVFVSDGAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180
Query: 188 MRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
MRCT ENGFFPDLSTV RTDIIFFCSPNNPTGAAATREQLT+LV+FAK NGSIIVYDSAY
Sbjct: 181 MRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
Query: 248 ALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDF 307
A+Y+SDDNPRSIFEIPGA+EVA+ET+SFS YAGFTGVRLGWTVIPK+LL+SDGFPVAKDF
Sbjct: 241 AMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 300
Query: 308 NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK 367
NRI+CTCFNGASNISQAG LACL+PEG +A+H+VIGFYKENT+II++TF SLG+ VYGGK
Sbjct: 301 NRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGK 360
Query: 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKR 427
NAPYVWV FP +SSWDVF+EILEKTHVVTT +RVSAFGHR N+LEAC+R
Sbjct: 361 NAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRR 420
Query: 428 FKHLYK 433
FK LYK
Sbjct: 421 FKQLYK 426
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/426 (80%), Positives = 376/426 (88%), Gaps = 1/426 (0%)
Query: 8 AKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVIS 67
AKR++ CKCVA PQE KI YKTKVSRN N KLQAGYLFPEIARR++AH+LKYPDA+VIS
Sbjct: 2 AKRVNTCKCVATPQE-KIEYKTKVSRNSNXSKLQAGYLFPEIARRRSAHLLKYPDAQVIS 60
Query: 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127
LGIGDTTEPIPEVITSA AK+++ LST EGYSGYGAEQG KPLRAAIA TFY LGI +
Sbjct: 61 LGIGDTTEPIPEVITSAXAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDD 120
Query: 128 DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEY 187
D+FVSDGAKCDISRLQ+ FGSNVT+AVQDPSYPAYVDSSVI GQTG+F D +KYG IEY
Sbjct: 121 DVFVSDGAKCDISRLQVXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEY 180
Query: 188 MRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
RCT ENGFFPDLSTV RTDIIFFCSPNNPTGAAATREQLT+LV+FAK NGSIIVYDSAY
Sbjct: 181 XRCTPENGFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY 240
Query: 248 ALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDF 307
A Y SDDNPRSIFEIPGA+EVA ET+SFSKYAGFTGVRLGWTVIPK+LL+SDGFPVAKDF
Sbjct: 241 AXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 300
Query: 308 NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK 367
NRI+CTCFNGASNISQAG LACL+PEG +A H+VIGFYKENT+II++TF SLG+ VYGGK
Sbjct: 301 NRIICTCFNGASNISQAGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYDVYGGK 360
Query: 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKR 427
NAPYVWV FP +SSWDVF+EILEKTHVVTT +RVSAFGHR N+LEAC+R
Sbjct: 361 NAPYVWVHFPNQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRR 420
Query: 428 FKHLYK 433
FK LYK
Sbjct: 421 FKQLYK 426
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 533 bits (1372), Expect = e-152, Method: Compositional matrix adjust.
Identities = 246/413 (59%), Positives = 313/413 (75%)
Query: 21 QEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEV 80
+ +K+ TK+ RN NL KL+ YLFPEI RR+ H+ K+P+ ++ISLG GDTTEPIPE
Sbjct: 28 EMKKLGGSTKLVRNVNLEKLKNNYLFPEINRRELEHIEKHPNVQLISLGTGDTTEPIPEQ 87
Query: 81 ITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140
ITS ++ ++ LST EGY GYG EQG K LR AIA TFY+DL ++ ++FVSDGA+ DIS
Sbjct: 88 ITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDIS 147
Query: 141 RLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL 200
RLQ++ GSNVT+AVQDP++PAY+DSSVI+GQTG F + +KY + YM C N FFPDL
Sbjct: 148 RLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL 207
Query: 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260
+ RTD+IFFCSPNNPTG A+R+QL +LV FAK NGSII++DSAYA +I D +PRSI+
Sbjct: 208 AMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIY 267
Query: 261 EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASN 320
EIPGA+EVAIE SSFSK+AGFTGVRLGW++IP ELL+S+GFP+ DF+RIV T FNGASN
Sbjct: 268 EIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASN 327
Query: 321 ISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRS 380
I+QAGGLACLS G K + V +YKEN I+++T SLG KVYGG NAPY+WV F G
Sbjct: 328 IAQAGGLACLSSGGLKEIRSVNNYYKENRKILMDTLVSLGLKVYGGVNAPYLWVHFKGSK 387
Query: 381 SWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKRFKHLYK 433
SWDVF+EILE TH++T +R+S FG R +++EA KR ++ +
Sbjct: 388 SWDVFNEILENTHIITVPGSGFGPGGEEYLRISGFGRRDHIVEASKRLQNFFN 440
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 528 bits (1359), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/403 (63%), Positives = 312/403 (77%), Gaps = 3/403 (0%)
Query: 31 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSY 90
V RN N GKL+AGYLFPEIARR+ AH K PDA++ISLGIGDTTEP+P+ I A+AK +
Sbjct: 37 VQRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAA 96
Query: 91 ALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNV 150
L+T+EGYSGYGAEQG+ LR A+ASTFY G +IF+SDG+KCDI+R+Q++FGS
Sbjct: 97 GLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMFGSKP 156
Query: 151 TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIF 210
T+AVQDPSYP YVD+SV+MG TG+ + + IEYM C +N FFPDLS RTDIIF
Sbjct: 157 TVAVQDPSYPVYVDTSVMMGMTGD--HNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIF 214
Query: 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD-DNPRSIFEIPGAKEVA 269
FCSPNNPTGAAATR QLT LV FA+ NGSI+VYD+AYALYIS+ D P++I+EIPGA EVA
Sbjct: 215 FCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVA 274
Query: 270 IETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLAC 329
IET SFSKYAGFTGVRLGWTV+PK L +++G PV D+NR++ TCFNGASNI QAGGLAC
Sbjct: 275 IETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLAC 334
Query: 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEIL 389
L PEG K ++ +I FYKEN I+ TF +GF VYGG +APY+WV FPG+ SWDVF+EIL
Sbjct: 335 LQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEIL 394
Query: 390 EKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKRFKHLY 432
E+ ++VTT +R SAFG R N+LEA +RFK Y
Sbjct: 395 ERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAY 437
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 236/403 (58%), Gaps = 20/403 (4%)
Query: 31 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSY 90
+ RN + L YLF ++ +R A L+ P VI+L IGDTT+P+ + A A
Sbjct: 1 MKRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIA 60
Query: 91 ALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNV 150
LS+ GYG + G LR ++ FY+ ++ +IF+SDGAK D+ RL FG N
Sbjct: 61 RLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF-VDAKEIFISDGAKVDLFRLLSFFGPNQ 119
Query: 151 TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIF 210
T+A+QDPSYPAY+D + + G +I + C EN FFP+ DI+
Sbjct: 120 TVAIQDPSYPAYLDIARLTGAK-----------EIIALPCLQENAFFPEFPEDTHIDILC 168
Query: 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVA 269
CSPNNPTG ++QL +V +A ++ +I++D+AY+ +ISD + P+SIFEIP A+ A
Sbjct: 169 LCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCA 228
Query: 270 IETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLAC 329
IE +SFSK GF G+RLGWTVIP+EL ++DG V +D+ R + T FNGAS +Q G+A
Sbjct: 229 IEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAG 288
Query: 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR---SSWDVFS 386
LS E I +Y+EN+D++ + + GF+V+GG++APY+WV+ P + S D+F
Sbjct: 289 LS---ILPQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVK-PTQANISDRDLFD 344
Query: 387 EILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKRFK 429
L + H+ T +R S+ G R ++L AC+R +
Sbjct: 345 FFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 164/385 (42%), Gaps = 41/385 (10%)
Query: 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKD-- 121
++I L +G+ P P I L ++ +E GY +G LR AI S +Y+D
Sbjct: 38 DIIDLSMGNPDGPTPPHIVEKLC----TVAQREDTHGYSTSRGIPRLRRAI-SHWYRDRY 92
Query: 122 -LGIE-EGDIFVSDGAKCDISRLQI-VFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKD 178
+ I+ E + V+ G+K ++ L + T+ V +PSYP ++ +VI G
Sbjct: 93 DVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAG-------- 144
Query: 179 AEKYGKIEYMRCTAENGFFPDLSTVARTDI-----IFFCSPNNPTGAAATREQLTRLVQF 233
++ + FF +L R I + P+NPT + R+V
Sbjct: 145 ----AQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVAL 200
Query: 234 AKDNGSIIVYDSAYALYISDD-NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292
AK ++V+D AYA + D SI ++PGAK++A+E + SK G R+G+ V
Sbjct: 201 AKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN 260
Query: 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDII 352
EL+ + RI G Q +A L + + V ++ Y++ D++
Sbjct: 261 PELVSA--------LARIKSYHDYGTFTPLQVAAIAALEGDQ-QCVRDIARQYQQRRDVL 311
Query: 353 VETFNSLGFKVYGGKNAPYVWVQFP----GRSSWDVFSEILEKTHVVTTXXXXXXXXXXX 408
V+ G+ V K + YVW + P S + ++L+ V +
Sbjct: 312 VKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDD 371
Query: 409 XIRVSAFGHRGNVLEACKRFKHLYK 433
+R + +R + +A + K +++
Sbjct: 372 HVRFALIENRDRLRQAVRGIKAMFR 396
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 152/385 (39%), Gaps = 42/385 (10%)
Query: 64 EVISLGIG----DTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY 119
+VISLGIG DT + I E AL K G + YG G LR AIA
Sbjct: 26 DVISLGIGEPDFDTPQHIKEYAKEALDK---------GLTHYGPNIGLLELREAIAEKLK 76
Query: 120 KDLGIE---EGDIFVSDGA-KCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMG----Q 171
K GIE + +I V GA + + L + + P++ +Y + ++ G +
Sbjct: 77 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136
Query: 172 TGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLV 231
+++D + E + + +T + SP NPTGA T++ L +
Sbjct: 137 VPTYEEDEFRLNVDELKKYVTD-----------KTRALIINSPCNPTGAVLTKKDLEEIA 185
Query: 232 QFAKDNGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290
F ++ I++ D Y +I DD SI + G E I + FSK TG RLG+
Sbjct: 186 DFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 245
Query: 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350
P ++ F TC + I A A +KAV E+ Y
Sbjct: 246 APSWIIER-----MVKFQMYNATC--PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRK 298
Query: 351 IIVETFNSLGFKVYGGKNAPYVW--VQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXX 408
++ + N +G K A Y++ ++ G +S +L++ V
Sbjct: 299 LVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEG 358
Query: 409 XIRVSAFGHRGNVLEACKRFKHLYK 433
+R+S + EA +R + + K
Sbjct: 359 YVRISYATAYEKLEEAMERMERVLK 383
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 141/343 (41%), Gaps = 43/343 (12%)
Query: 64 EVISLGIG----DTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY 119
+VISLGIG DT + I E AL K G + YG G LR AIA
Sbjct: 27 DVISLGIGEPDFDTPQHIKEYAKEALDK---------GLTHYGPNIGLLELREAIAEKLK 77
Query: 120 KDLGIE---EGDIFVSDGA-KCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMG----Q 171
K GIE + +I V GA + + L + + P++ +Y + ++ G +
Sbjct: 78 KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 137
Query: 172 TGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLV 231
+++D + E + + +T + SP NPTGA T++ L +
Sbjct: 138 VPTYEEDEFRLNVDELKKYVTD-----------KTRALIINSPCNPTGAVLTKKDLEEIA 186
Query: 232 QFAKDNGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290
F ++ I++ D Y +I DD SI + G E I + FSK TG RLG+
Sbjct: 187 DFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 246
Query: 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350
P ++ F TC + I A A +KAV E+ Y
Sbjct: 247 APSWIIER-----MVKFQMYNATC--PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRK 299
Query: 351 IIVETFNSLGFKVYGGKNAPYVW--VQFPGRSSWDVFSEILEK 391
++ + N +G K A Y++ ++ G +S FSE++ K
Sbjct: 300 LVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTS-KKFSELMLK 341
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 140/339 (41%), Gaps = 48/339 (14%)
Query: 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE 125
++LG G + P P + A+ + AL Q+ Y+ G LR A+A F +E
Sbjct: 28 VNLGQGFPSNPPPPFLLEAVRR---ALGRQDQYA---PPAGLPALREALAEEF----AVE 77
Query: 126 EGDIFVSDGAKCDI-SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGK 184
+ V+ GA + LQ + G + V +P + Y+ + + G +
Sbjct: 78 PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVR------- 130
Query: 185 IEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGS 239
+ T E GF DLS + RT + +P NPTG +L + + A+ +
Sbjct: 131 ---LDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDL 186
Query: 240 IIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299
++ D Y + PR + E A E S K TG R+GW V PKE +
Sbjct: 187 FLISDEVYDELYYGERPRRLREF--APERTFTVGSAGKRLEATGYRVGWIVGPKEFM--- 241
Query: 300 GFPVAKDFNRIVCTCFNGASNISQAG---GLACLSPEGF-KAVHEVIGFYKENTDIIVET 355
P + T F+ + + QAG L EGF +A+ E Y+ D++
Sbjct: 242 --PRLAGMRQ--WTSFSAPTPL-QAGVAEALKLARREGFYEALREG---YRRRRDLLAGG 293
Query: 356 FNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHV 394
++G +VY + ++ + PG WD F ++E+ V
Sbjct: 294 LRAMGLRVYVPEGTYFLMAELPG---WDAF-RLVEEARV 328
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 42/321 (13%)
Query: 93 STQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVF---G 147
+ ++G + YG GE LR AIA +D G+ G +I V++G K I L + G
Sbjct: 55 ALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPG 114
Query: 148 SNVTMAVQDP---SYPAYVD----SSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL 200
V + P SYP V + VI+ T E Q E +R
Sbjct: 115 DEVIIPA--PFWVSYPEMVKLAEGTPVILPTTVETQFKVSP----EQIR----------Q 158
Query: 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260
+ +T ++ F +P+NPTG T +++ + Q A + G ++ D Y + DD
Sbjct: 159 AITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSI 218
Query: 261 --EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGA 318
P A E ++ S F+K TG R+G+ P P+ K +I +
Sbjct: 219 GAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNV 270
Query: 319 SNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVW--VQ 375
+Q G +A V E++ + E +++ N++ G + A Y++ +
Sbjct: 271 CTFAQYGAIAAYE-NSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIA 329
Query: 376 FPGRSSWDVFSEILEKTHVVT 396
GRSS D SE+L++ V T
Sbjct: 330 KTGRSSLDFCSELLDQHQVAT 350
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 136/335 (40%), Gaps = 40/335 (11%)
Query: 53 KAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRA 112
KA ++K + +VI+L G+ P PE + + Q+G Y +G LR
Sbjct: 32 KAKALIKKGE-DVINLTAGEPDFPTPEPVVEEAVR-----FLQKGEVKYTDPRGIYELRE 85
Query: 113 AIA----STFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVI 168
IA + KD+ ++ + V++GAK Q +F N MA+ DP V S V
Sbjct: 86 GIAKRIGERYKKDISPDQ--VVVTNGAK------QALF--NAFMALLDPGDEVIVFSPVW 135
Query: 169 MGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS-----TVARTDIIFFCSPNNPTGAAAT 223
+ + G + + F P L V +T + SPNNPTG
Sbjct: 136 VSYIPQIILAG---GTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR 192
Query: 224 REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTG 283
RE L LV+ AK I+ D Y + D SI ++ + + + FSK TG
Sbjct: 193 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG 252
Query: 284 VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIG 343
R+G+ + ++ VA ++I + + ++Q L L + V
Sbjct: 253 WRVGYLISSEK--------VATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQT--- 301
Query: 344 FYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG 378
+KE + +VE +G K + A Y++ + G
Sbjct: 302 -FKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRG 335
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 41/329 (12%)
Query: 58 LKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAST 117
L+ ++++L G+ PE + A A+R+ A +G + Y G LR A+A
Sbjct: 26 LRRQGVDLVALTAGEPDFDTPEHVKEA-ARRALA----QGKTKYAPPAGIPELREALAEK 80
Query: 118 FYKDLGIE---EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE 174
F ++ G+ E I G++ + Q + + V P + +Y + G
Sbjct: 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG---- 136
Query: 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTR 229
G + + E GF PD V RT + SPNNPTGA +E L
Sbjct: 137 --------GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188
Query: 230 LVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLG 287
L + A ++ +V D Y + + S PG A E + + +K TG R+G
Sbjct: 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIG 244
Query: 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIG-FY 345
+ PKE++ K + I+Q L L+ E +A E+ Y
Sbjct: 245 YACGPKEVI--------KAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 346 KENTDIIVETFNSLGFKVYGGKNAPYVWV 374
+ D+++E +LG K A YV +
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLM 325
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 130/329 (39%), Gaps = 41/329 (12%)
Query: 58 LKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAST 117
L+ ++++L G+ PE + A A+R+ A +G + Y G LR A+A
Sbjct: 26 LRRQGVDLVALTAGEPDFDTPEHVKEA-ARRALA----QGKTKYAPPAGIPELREALAEK 80
Query: 118 FYKDLGIE---EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE 174
F ++ G+ E I G + + Q + + V P + +Y + G
Sbjct: 81 FRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG---- 136
Query: 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTR 229
G + + E GF PD V RT + SPNNPTGA +E L
Sbjct: 137 --------GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188
Query: 230 LVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLG 287
L + A ++ +V D Y + + S PG A E + + +K TG R+G
Sbjct: 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIG 244
Query: 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIG-FY 345
+ PKE++ K + I+Q L L+ E +A E+ Y
Sbjct: 245 YACGPKEVI--------KAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 346 KENTDIIVETFNSLGFKVYGGKNAPYVWV 374
+ D+++E +LG K A YV +
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLM 325
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 41/329 (12%)
Query: 58 LKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAST 117
L+ ++++L G+ PE + A A+R+ A +G + Y G LR A+A
Sbjct: 26 LRRQGVDLVALTAGEPDFDTPEHVKEA-ARRALA----QGKTKYAPPAGIPELREALAEK 80
Query: 118 FYKDLGIE---EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE 174
F ++ G+ E I G++ + Q + + V P + +Y + G
Sbjct: 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG---- 136
Query: 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTR 229
G + + E GF PD V RT + SPNNPTGA +E L
Sbjct: 137 --------GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188
Query: 230 LVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLG 287
L + A ++ +V D Y + + S PG A E + + +K TG R+G
Sbjct: 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIG 244
Query: 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIG-FY 345
+ PKE++ K + I+Q L L+ E +A E+ Y
Sbjct: 245 YACGPKEVI--------KAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 346 KENTDIIVETFNSLGFKVYGGKNAPYVWV 374
+ D+++E +LG K A YV +
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLM 325
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 41/329 (12%)
Query: 58 LKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAST 117
L+ ++++L G+ PE + A A+R+ A +G + Y G LR A+A
Sbjct: 26 LRRQGVDLVALTAGEPDFDTPEHVKEA-ARRALA----QGKTKYAPPAGIPELREALAEK 80
Query: 118 FYKDLGIE---EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE 174
F ++ G+ E I G++ + Q + + V P + +Y + G
Sbjct: 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG---- 136
Query: 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTR 229
G + + E GF PD V RT + SPNNPTGA +E L
Sbjct: 137 --------GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188
Query: 230 LVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLG 287
L + A ++ +V D Y + + S PG A E + + +K TG R+G
Sbjct: 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIG 244
Query: 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIG-FY 345
+ PKE++ K + I+Q L L+ E +A E+ Y
Sbjct: 245 YACGPKEVI--------KAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 346 KENTDIIVETFNSLGFKVYGGKNAPYVWV 374
+ D+++E +LG K A YV +
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLM 325
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 131/329 (39%), Gaps = 41/329 (12%)
Query: 58 LKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAST 117
L+ ++++L G+ PE + A A+R+ A +G + Y G LR A+A
Sbjct: 26 LRRQGVDLVALTAGEPDFDTPEHVKEA-ARRALA----QGKTKYAPPAGIPELREALAEK 80
Query: 118 FYKDLGIE---EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE 174
F ++ G+ E I G++ + Q + + V P + +Y + G
Sbjct: 81 FRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG---- 136
Query: 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTR 229
G + + E GF PD V RT + SPNNPTGA +E L
Sbjct: 137 --------GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188
Query: 230 LVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLG 287
L + A ++ +V D Y + + S PG A E + + +K TG R+G
Sbjct: 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAKAFAMTGWRIG 244
Query: 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIG-FY 345
+ PKE++ K + I+Q L L+ E +A E+ Y
Sbjct: 245 YACGPKEVI--------KAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 346 KENTDIIVETFNSLGFKVYGGKNAPYVWV 374
+ D+++E +LG K A YV +
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLM 325
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 129/329 (39%), Gaps = 41/329 (12%)
Query: 58 LKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAST 117
L+ ++++L G+ PE + A A+R+ A +G + Y G LR A+A
Sbjct: 26 LRRQGVDLVALTAGEPDFDTPEHVKEA-ARRALA----QGKTKYAPPAGIPELREALAEK 80
Query: 118 FYKDLGIE---EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE 174
F ++ G+ E I G + + Q + + V P + +Y + G
Sbjct: 81 FRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAG---- 136
Query: 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTV-----ARTDIIFFCSPNNPTGAAATREQLTR 229
G + + E GF PD V RT + SPNNPTGA +E L
Sbjct: 137 --------GVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEA 188
Query: 230 LVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLG 287
L + A ++ +V D Y + + S PG A E + + + TG R+G
Sbjct: 189 LARLAVEHDFYLVSDEIYEHLLYEGEHFS----PGRVAPEHTLTVNGAAXAFAMTGWRIG 244
Query: 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIG-FY 345
+ PKE++ K + I+Q L L+ E +A E+ Y
Sbjct: 245 YACGPKEVI--------KAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAY 296
Query: 346 KENTDIIVETFNSLGFKVYGGKNAPYVWV 374
+ D+++E +LG K A YV +
Sbjct: 297 RRRRDLLLEGLTALGLKAVRPSGAFYVLM 325
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI 124
+I+ +G P P+ I K AL+ E YGA G++ + AI + + +
Sbjct: 49 LINXAVGIPDGPTPQGIIDHFQK---ALTIPEN-QKYGAFHGKEAFKQAIVDFYQRQYNV 104
Query: 125 ---EEGDIFVSDGAKCDISRLQI-VFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180
+E ++ + G K + + V + + DP Y Y+ + V++
Sbjct: 105 TLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYL-AGVLLAD--------- 154
Query: 181 KYGKIEYMRCTAENGFFPDLSTVA-----RTDIIFFCSPNNPTGAAATREQLTRLVQFAK 235
GK + + + PD S V +T +I+ PNNPTG+ AT+E + K
Sbjct: 155 --GKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFK 211
Query: 236 DNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295
+ IV+D AY + D SI K+VAIE S SK +G R+G+ V K+
Sbjct: 212 GTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDX 271
Query: 296 L 296
+
Sbjct: 272 I 272
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 148/358 (41%), Gaps = 59/358 (16%)
Query: 64 EVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY 119
+VI L IGD +P PE + K +Y + +EG++ YG +G LR AI
Sbjct: 39 KVIRLNIGDPVKFDFQP-PEHM-----KEAYCKAIKEGHNYYGDSEGLPELRKAIVEREK 92
Query: 120 KDLGIE--EGDIFVSDGAKCDISRLQIVFGSNVT----MAVQDPSYPAYVDSSVIMGQTG 173
+ G++ D+ V+ LQ++FG+ + + V PSYP Y G
Sbjct: 93 RKNGVDITPDDVRVTAAV---TEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYG--- 146
Query: 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVA-----RTDIIFFCSPNNPTGAAATREQLT 228
GK R E + PD+ + RT I +PNNPTGA ++ L
Sbjct: 147 ---------GKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLE 197
Query: 229 RLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA--KEV-AIETSSFSKYAGFTGVR 285
++ A + ++ D Y L + S PG+ K+V I + SK TG R
Sbjct: 198 EILNIAGEYEIPVISDEIYDLMTYEGEHIS----PGSLTKDVPVIVMNGLSKVYFATGWR 253
Query: 286 LGWT--VIPKELLFSDGFPVAKDFNRI--VCTCFNGASNISQAGGLACLSPEGFKAVHEV 341
LG+ V P+ L V + +R+ + C N + + GL P + + E
Sbjct: 254 LGYMYFVDPENKLSE----VREAIDRLARIRLCPNTPAQFAAIAGLT--GPMDY--LKEY 305
Query: 342 IGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQF---PGRSSWDVFSEILEKTHVV 395
+ KE D I + N + G + A Y++ + P ++ + ++L HV+
Sbjct: 306 MKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVL 363
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 144/381 (37%), Gaps = 38/381 (9%)
Query: 55 AHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAI 114
A L+ +VI L IG+ P+ I K S +EG + Y +G LR I
Sbjct: 21 AQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIK-----SLKEGKTHYTDSRGILELREKI 75
Query: 115 ASTFYKD---LGIEEGDIFVSDGAKCDIS-RLQIVFGSNVTMAVQDPSYPAYVDSSVIMG 170
S YKD I +I ++ G+ + L + + +Q+P YP Y + +G
Sbjct: 76 -SELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLG 134
Query: 171 QTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRL 230
K + T E+ + + +T I SP+NP G RE +
Sbjct: 135 ------------AKPVFCDFTVES---LEEALSDKTKAIIINSPSNPLGEVIDRE----I 175
Query: 231 VQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290
+FA +N I+ D Y + + S E E I + FS TG R+G+ +
Sbjct: 176 YEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVI 235
Query: 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350
E++ + ++ F A ISQ L E + ++ +I +
Sbjct: 236 SNDEII--------EAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRR 287
Query: 351 IIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXI 410
++++ G++V A YV+ G + ++L++ V T I
Sbjct: 288 LVLKYVKDFGWEVNNPIGAYYVFPNI-GEDGREFAYKLLKEKFVALTPGIGFGSKGKNYI 346
Query: 411 RVSAFGHRGNVLEACKRFKHL 431
R+S N+ E +R K
Sbjct: 347 RISYANSYENIKEGLERIKEF 367
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 39/253 (15%)
Query: 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTF---YK 120
E + L IG+ P P+VIT AL + L Y G LR A A+ Y
Sbjct: 31 EAVPLHIGEPKHPTPKVITDALTASLHELEK------YPLTAGLPELRQACANWLKRRYD 84
Query: 121 DLGIE-EGDIFVSDGAKCDI-SRLQIVF-----GSNVTMAVQDPSYPAYVDSSVIMGQTG 173
L ++ + +I G++ + S +Q V G + +P Y Y ++++ G
Sbjct: 85 GLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGG--- 141
Query: 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVA-----RTDIIFFCSPNNPTGAAATREQLT 228
G+I + C A + F PD +++ RT ++F CSPNNP+G+ +
Sbjct: 142 ---------GEIHFANCPAPS-FNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWK 191
Query: 229 RLVQFAKDNGSIIVYDSAYA-LYISDDNP----RSIFEIPGAKEVAIETSSFSKYAGFTG 283
+ G II D Y+ +Y + P ++ ++ +++ + +S S + G
Sbjct: 192 EVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXFTSLSXRSNVPG 251
Query: 284 VRLGWTVIPKELL 296
+R G+ ELL
Sbjct: 252 LRSGFVAGDAELL 264
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 34/242 (14%)
Query: 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK 120
P + LGIG+ P+ I AL +++L+ Y E+ LRAA F +
Sbjct: 21 PKKRGLDLGIGEPQFETPKFIQDALKNHTHSLNI------YPKSAFEESLRAAQRGFFKR 74
Query: 121 DLGIE--EGDIFVSDGAKCDISRLQ--IVFG-SNVTMAVQDPSYPAYVDSSVIMGQTGEF 175
IE E ++ + G++ + ++F N T+A +P Y Y
Sbjct: 75 RFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIY------------- 121
Query: 176 QKDAEKYGKIEYMR--CTAENGFFPDLST--VARTDIIFFCSPNNPTGAAATREQLTRLV 231
+ A K+ K + + T EN F P L+ + D++ SPNNPTG + E+L V
Sbjct: 122 -EGAAKFIKAKSLLXPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEELISWV 180
Query: 232 QFAKDNGSIIVYDSAYALYISDDNPRSIFE---IPG--AKEVAIETSSFSKYAGFTGVRL 286
+ A + I++ D Y+ + P S+ E + G A + + S SK + G+R
Sbjct: 181 KLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRS 240
Query: 287 GW 288
G+
Sbjct: 241 GF 242
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 140/379 (36%), Gaps = 45/379 (11%)
Query: 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI 124
+I L IG T P PE ALA+ AL+ Y GY + P A + G+
Sbjct: 27 LIDLSIGSTDLPPPEAPLKALAE---ALNDPTTY-GYCLKSCTLPFLEEAARWYEGRYGV 82
Query: 125 ---EEGDIFVSDGAKCDISRLQIVFGS-NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180
+ G++ ++ L + + + + +YP+Y ++ +
Sbjct: 83 GLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLR-------- 134
Query: 181 KYGKIEYMRCTAENGFFPDLSTVAR-----TDIIFFCSPNNPTGAAATREQLTRLVQFAK 235
++ E+G DL V ++ PNNPTGA A + A+
Sbjct: 135 -----TFLIPLREDGLA-DLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLAR 188
Query: 236 DNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295
+G +++D+ Y + + S +PGAKE +E S SK G RLG+ + +E
Sbjct: 189 KHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEA 248
Query: 296 LFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVI-GF---YKENTDI 351
L R+ G + +Q G+ + E K EV+ G+ Y+E
Sbjct: 249 L--------ARLERV-----KGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALG 295
Query: 352 IVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIR 411
+ E + + + Y+W + P F L + V +R
Sbjct: 296 MAEALKGV-LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVR 354
Query: 412 VSAFGHRGNVLEACKRFKH 430
++ +LEA KR +
Sbjct: 355 IALVRPLEELLEAAKRIRE 373
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 46/318 (14%)
Query: 96 EGYSGYGAEQGEKPLRAAIASTFYKDLGIE---EGDIFVSDGAKCDI-SRLQIVFGSNVT 151
+G + Y G + LR AIA + G + + DI V+ GA + + + + +
Sbjct: 58 QGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDE 117
Query: 152 MAVQDPSYPAYVDSSVIMG--------QTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV 203
+ DPSY +Y + + G Q F+ D +++ + LS
Sbjct: 118 VICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAAL--------------LSE- 162
Query: 204 ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA-LYISDDNPRSIFEI 262
RT ++ +P+NP+ + L Q + ++ D Y + S S+
Sbjct: 163 -RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAH 221
Query: 263 PGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRI---VCTCFNGAS 319
P +E A+ SSF K TG ++G+ V P P++ + ++ + N +
Sbjct: 222 PQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PISAEIRKVHQYLTFSVNTPA 273
Query: 320 NISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR 379
++ A L PE + A+ + FY++ DI+V N ++ + ++ V +
Sbjct: 274 QLALADMLRA-EPEHYLALPD---FYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAV 329
Query: 380 SSWD--VFSEILEKTHVV 395
S+ D F + L + H V
Sbjct: 330 STLDDVEFCQWLTQEHGV 347
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 183 GKIEYMRCTAENGFFPDLSTVAR-----TDIIFFCSPNNPTGAAATREQLTRLVQFAKDN 237
+++ + ENG+ PDL + + T I + NNPTGA R L LV+ A +
Sbjct: 127 AEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEV 186
Query: 238 GSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297
G+ I+ D Y + D P SI E+ + I +S S G+R+GW ++
Sbjct: 187 GAYILSDEVYRSFSELDVP-SIIEV---YDKGIAVNSLSXTYSLPGIRIGWVAANHQV-- 240
Query: 298 SDGFPVAKDFNRIVCTCFN 316
+D +D+ I F+
Sbjct: 241 TDILRDYRDYTXICAGVFD 259
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 15/245 (6%)
Query: 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKD 121
+ +V++LG G P P+ A +A+S + Y G PL +AS F +
Sbjct: 27 EHDVVNLGQGFPDFPPPDFAVEAF---QHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 83
Query: 122 LGIEEG---DIFVSDGAKCDI-SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK 177
LG E ++ V+ G + + Q + + + +P + Y +++ G F
Sbjct: 84 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV- 142
Query: 178 DAEKYGKIEYMRCTAENGFFPDLSTVA-----RTDIIFFCSPNNPTGAAATREQLTRLVQ 232
+ K G I+ + + + D +A RT + +PNNP G +RE+L +
Sbjct: 143 -SLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 233 FAKDNGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291
+ + + + D Y + D + SI +PG E + S K TG ++GW +
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG 261
Query: 292 PKELL 296
P ++
Sbjct: 262 PDHIM 266
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 15/245 (6%)
Query: 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKD 121
+ +V++LG G P P+ A +A+S + Y G PL +AS F +
Sbjct: 27 EHDVVNLGQGFPDFPPPDFAVEAF---QHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 83
Query: 122 LGIEEG---DIFVSDGAKCDI-SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK 177
LG E ++ V+ G + + Q + + + +P + Y +++ G F
Sbjct: 84 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV- 142
Query: 178 DAEKYGKIEYMRCTAENGFFPDLSTVA-----RTDIIFFCSPNNPTGAAATREQLTRLVQ 232
+ K G I+ + + + D +A RT + +PNNP G +RE+L +
Sbjct: 143 -SLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 233 FAKDNGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291
+ + + + D Y + D + SI +PG E + S TG ++GW +
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLG 261
Query: 292 PKELL 296
P ++
Sbjct: 262 PDHIM 266
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 15/245 (6%)
Query: 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKD 121
+ +V++LG G P P+ A +A+S + Y G PL +AS F +
Sbjct: 27 EHDVVNLGQGFPDFPPPDFAVEAF---QHAVSGDFMLNQYTKTFGYPPLTKILASFFGEL 83
Query: 122 LGIEEG---DIFVSDGAKCDI-SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK 177
LG E ++ V+ G + + Q + + + +P + Y +++ G F
Sbjct: 84 LGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV- 142
Query: 178 DAEKYGKIEYMRCTAENGFFPDLSTVA-----RTDIIFFCSPNNPTGAAATREQLTRLVQ 232
+ K G I+ + + + D +A RT + +PNNP G +RE+L +
Sbjct: 143 -SLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201
Query: 233 FAKDNGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291
+ + + + D Y + D + SI +PG E + S TG ++GW +
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLG 261
Query: 292 PKELL 296
P ++
Sbjct: 262 PDHIM 266
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 9/241 (3%)
Query: 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKD 121
D V++LG G P + L+K ++ + + G+G K L + +
Sbjct: 22 DPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQ 81
Query: 122 LGIEEGDIFVSDGAKCDI-SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180
+ E +I V+ GA + + +Q + + + P Y Y + G F
Sbjct: 82 IDPNE-EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140
Query: 181 KYGKIEYMRCTAENGFFP--DLST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKD 236
K + M+ T+ + F +L + ++T I +P+NP G TR++L +
Sbjct: 141 K--PTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVK 198
Query: 237 NGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295
+ ++ + D Y + + I +PG E I S K TG +LGW++ P L
Sbjct: 199 HDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHL 258
Query: 296 L 296
+
Sbjct: 259 I 259
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 129/341 (37%), Gaps = 38/341 (11%)
Query: 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTF--YKDL 122
+I +G P ALAK S + GY G LR IA + + +
Sbjct: 33 IIHXEVGQPGTGAPRGAVEALAK-----SLETDALGYTVALGLPALRQRIARLYGEWYGV 87
Query: 123 GIEEGDIFVSDGAKCD-ISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEK 181
++ G + ++ G+ + +F S + + P YP+Y I+ G D
Sbjct: 88 DLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSY---RQILRALGLVPVD--- 141
Query: 182 YGKIEYMRCTAENGFFPDLSTVARTDI--IFFCSPNNPTGAAATREQLTRLVQFAKDNGS 239
+ EN P + A D+ + SP NPTG L++ A+ G+
Sbjct: 142 ------LPTAPENRLQPVPADFAGLDLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGA 195
Query: 240 IIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299
+ D Y + + E+ + +SFSKY TG R+GW V+P++ +
Sbjct: 196 SFISDEIYHGIEYEAKAVTALEL---TDECYVINSFSKYFSXTGWRVGWXVVPEDQV--- 249
Query: 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359
+ RI F A + SQ A + + + + YK N + +E
Sbjct: 250 -----RVVERIAQNXFICAPHASQV--AALAALDCDAELQANLDVYKANRKLXLERLPKA 302
Query: 360 GF-KVYGGKNAPYVWVQFPGRS--SWDVFSEILEKTHVVTT 397
GF ++ A YV+ + S +EILEK V T
Sbjct: 303 GFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVT 343
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 31/265 (11%)
Query: 45 LFPEIARRKAAHMLK---YPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGY 101
LF + R+ H +K Y + E+I I D +P+ I +AL KR + +
Sbjct: 3 LFHKTVNRRGTHSIKWDTYKNEELIHAWIADXDFEVPQPIQTALKKRI-------EHPIF 55
Query: 102 GAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDIS-RLQIVFGSNVTMAVQDPS 158
G + + I + K + I++ I S G +S +Q N ++ VQ P
Sbjct: 56 GYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPI 115
Query: 159 YPAYVDSSVIMGQ---TGEFQKDAEKYG-KIEYMRCTAENGFFPDLSTVARTDIIFFCSP 214
YP + + + QK + Y E++ + G + CSP
Sbjct: 116 YPPFFEXVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQG----------VKLXLLCSP 165
Query: 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSS 274
+NP G +E+LT+L I+V D ++ I D+ + F ++E+A T +
Sbjct: 166 HNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFA-SLSEELAARTIT 224
Query: 275 F---SKYAGFTGVRLGWTVIPKELL 296
S G++ +IP E L
Sbjct: 225 CXAPSXTFNIAGLQASIIIIPNEKL 249
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 9/241 (3%)
Query: 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKD 121
D V++LG G P + L+K ++ + + G+G K L + +
Sbjct: 22 DPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQ 81
Query: 122 LGIEEGDIFVSDGAKCDI-SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180
+ E +I V+ GA + + +Q + + + P Y Y + G F
Sbjct: 82 IDPNE-EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140
Query: 181 KYGKIEYMRCTAENGFFP--DLST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKD 236
K + M+ T+ + F +L + ++T I +P+NP G TR++L +
Sbjct: 141 K--PTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVK 198
Query: 237 NGSIIVYDSAYALYISDDNPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295
+ ++ + D Y + + I +PG E I S TG +LGW++ P L
Sbjct: 199 HDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSIGPAHL 258
Query: 296 L 296
+
Sbjct: 259 I 259
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 131/348 (37%), Gaps = 51/348 (14%)
Query: 48 EIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGE 107
E +++AA + K V IG+ + P P+++ + K GY + QG+
Sbjct: 23 EYGKKRAAIVGK---ENVYDFSIGNPSIPAPQIVNDTI-KELVTDYDSVALHGYTSAQGD 78
Query: 108 KPLRAAIASTFYKDLGIE--EGDIFVSDGAKCDISRLQIVFGSN-----VTMAVQDPSYP 160
RAAIA G +++ + GA +S S+ +T+A P Y
Sbjct: 79 VETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYK 138
Query: 161 AYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGA 220
+V+++ + E D E + +I++ A T + SPNNP+G
Sbjct: 139 VFVNAA--GARLVEVPADTEHF-QIDFDALEERIN--------AHTRGVIINSPNNPSGT 187
Query: 221 AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK--------EVAIET 272
+ E + +L + I ++I D P G K + +
Sbjct: 188 VYSEETIKKLSDLLEKKSKEI----GRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVC 243
Query: 273 SSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTC-----FNGASNISQAGGL 327
S+SK G R+G+ ++P E+ A VC + A ++ Q +
Sbjct: 244 YSYSKSLSLPGERIGYVLVPDEVYDKAELYAA------VCGAGRALGYVCAPSLFQKXIV 297
Query: 328 ACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQ 375
C G I YKEN D++ E +G+ + A Y +V+
Sbjct: 298 KCQGATG------DINAYKENRDLLYEGLTRIGYHCFKPDGAFYXFVK 339
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 107/256 (41%), Gaps = 17/256 (6%)
Query: 144 IVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN---GFFPDL 200
IV G+ + ++ S + +I+ E++ +A+K+G EN + +
Sbjct: 81 IVLGNGASEIIE-LSISLFEKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDII 139
Query: 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260
S + D + +PNNP G +E+ +++ A++ I+ D A+ + D + +
Sbjct: 140 SKIDDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVG 199
Query: 261 EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASN 320
EI + I + +K+ G+R G+ + + + + + N CF
Sbjct: 200 EIKNYSCLFI-IRAMTKFFAMPGIRFGYGITNNKEIAA---KIKAKQNPWNINCF----- 250
Query: 321 ISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF-KVYGGKNAPYVWVQFPGR 379
++ + CL + + E + + K+ +E N +GF K +A +V +
Sbjct: 251 -AEMAAINCLKDTNY--IEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENI 307
Query: 380 SSWDVFSEILEKTHVV 395
S ++ +L++ V+
Sbjct: 308 SGEKLYDSLLKEDIVI 323
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 108 KPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVF-GSNVTMAVQDPSYPAYVDSS 166
+P + K ++ I V++G ++ F GS +A+ PS+ Y D+
Sbjct: 49 EPDAGTLRQXLAKRNSVDNNAILVTNGPTAAFYQIAQAFRGSRSLIAI--PSFAEYEDAC 106
Query: 167 VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQ 226
F E G+ ++ + D + C+PNNP G R +
Sbjct: 107 RXYEHEVCFYPSNEDIGEADF----------------SNXDFCWLCNPNNPDGRLLQRTE 150
Query: 227 LTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286
+ RL+ D + V D +Y + +++ R +I G K + + SFS G G+R+
Sbjct: 151 ILRLLNDHPD--TTFVLDQSYVSFTTEEVIRPA-DIKGRKNL-VXVYSFSHAYGIPGLRI 206
Query: 287 GWTVIPKEL 295
G+ V K+
Sbjct: 207 GYIVANKDF 215
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 107/290 (36%), Gaps = 32/290 (11%)
Query: 101 YGAEQGEKPLRAAIASTFYKDLGI-EEGDIFVSDGAKCDISRLQIVF-GSNVTMAVQDPS 158
YG +G PLR + K GI ++ DI ++ G++ + + VF + V+ P+
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPT 173
Query: 159 YPAYVDSSVIMGQTGEFQKDAEKYGKI----EYMRCTAENGFFPDLSTVARTDIIFFCSP 214
Y A + + F +Y +I E M+ +L + + + + P
Sbjct: 174 YLAALQA---------FNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVP 224
Query: 215 --NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIET 272
NP G ++ L++ A + I+V D Y NP + + I
Sbjct: 225 TFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYL 284
Query: 273 SSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP 332
+FSK G R+GW V ++ +AK + F G
Sbjct: 285 GTFSKILA-PGFRIGWMVGDPGIIRK--MEIAKQSTDLCTNVFGQVVAWRYVDG------ 335
Query: 333 EGF--KAVHEVIGFYKENTDIIVETFNSL---GFKVYGGKNAPYVWVQFP 377
G+ K + E+ FYK D ++E G K + ++WV P
Sbjct: 336 -GYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLP 384
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 123/332 (37%), Gaps = 40/332 (12%)
Query: 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSG----YGAEQGEKPLRAAIASTF 118
+++ISL G P P+ + R + E Y+ YG +G PLR +
Sbjct: 31 SDIISLAGG---LPNPKTFPKEII-RDILVEIMEKYADKALQYGTTKGFTPLRETLMKWL 86
Query: 119 YKDLGI-EEGDIFVSDGAKCDISRLQIVF-GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQ 176
K GI ++ DI ++ G++ + + VF + V+ P+Y A + + F
Sbjct: 87 GKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQA---------FN 137
Query: 177 KDAEKYGKI----EYMRCTAENGFFPDLSTVARTDIIFFCSP--NNPTGAAATREQLTRL 230
+Y +I E M+ +L + + + + P NP G ++ L
Sbjct: 138 FYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYL 197
Query: 231 VQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290
++ A + I+V D Y NP + + I +FSK G R+GW V
Sbjct: 198 LELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMV 256
Query: 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF--KAVHEVIGFYKEN 348
++ +AK + F G G+ K + E+ FYK
Sbjct: 257 GDPGIIRK--MEIAKQSTDLCTNVFGQVVAWRYVDG-------GYLEKHIPEIRKFYKPR 307
Query: 349 TDIIVETFNSL---GFKVYGGKNAPYVWVQFP 377
D ++E G K + ++WV P
Sbjct: 308 RDAMLEALEEFMPEGVKWTKPEGGMFIWVTLP 339
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 7/177 (3%)
Query: 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA-LYISDDNPRSI 259
+ ++T + +P+NP G TRE+LT L + +I+ D Y LY +D R
Sbjct: 197 AITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIA 256
Query: 260 FEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGAS 319
P ++ + S TG R+GW + L S AK RI CF S
Sbjct: 257 TLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELLSYA---AKAHTRI---CFASPS 310
Query: 320 NISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF 376
+ +A + ++ Y I F+ LG + +V V F
Sbjct: 311 PLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDF 367
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 119/305 (39%), Gaps = 35/305 (11%)
Query: 61 PDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAS 116
P+ +ISL IGD T P +T A+ AL + + Y+GY G R IAS
Sbjct: 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKD---ALDSGK-YNGYAPSIGFLSSREEIAS 107
Query: 117 TFY-KDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMG-QTG 173
++ + +E D+ ++ G I L ++ + V P + Y + MG +
Sbjct: 108 YYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVK 167
Query: 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQF 233
+ EK +I+ + + D +T + +P+NP G+ ++ L +++
Sbjct: 168 LYNLLPEKSWEIDLKQLE----YLID----EKTACLIVNNPSNPCGSVFSKRHLQKILAV 219
Query: 234 AKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI-P 292
A I+ D Y + D + +K G RLGW +I
Sbjct: 220 AARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHD 279
Query: 293 KELLFS----DGFPVAKDFNRIV--CTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYK 346
+ +F DG + K RI+ CT GA + C +P F H + F K
Sbjct: 280 RRDIFGNEIRDG--LVKLSQRILGPCTIVQGA-----LKSILCRTPGEF--YHNTLSFLK 330
Query: 347 ENTDI 351
N D+
Sbjct: 331 SNADL 335
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 119/309 (38%), Gaps = 47/309 (15%)
Query: 101 YGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYP 160
Y +G PLRA +A +G+ ++ ++ G++ + + VF D P
Sbjct: 70 YSPTEGYAPLRAFVAEW----IGVRPEEVLITTGSQQALDLVGKVF--------LDEGSP 117
Query: 161 AYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVA------RTDIIFFC-S 213
+++ MG F+ ++ + E G PDL + R ++ S
Sbjct: 118 VLLEAPSYMGAIQAFRLQGPRFLTV----PAGEEG--PDLDALEEVLKRERPRFLYLIPS 171
Query: 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY-ALYISDDNPRSIFEIPGAKEVA--- 269
NPTG RL+Q + G ++V D AY LY + S+FE+ A+E
Sbjct: 172 FQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL--AREAGYPG 229
Query: 270 -IETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLA 328
I SFSK G+R+ + V E L AK + N +
Sbjct: 230 VIYLGSFSKVLS-PGLRVAFAVAHPEAL--QKLVQAKQGADLHTPMLNQML-------VH 279
Query: 329 CLSPEGF-KAVHEVIGFYKENTDIIVETFN---SLGFKVYGGKNAPYVWVQFP-GRSSWD 383
L EGF + + V Y+E ++ + + K +VW++ P G S+
Sbjct: 280 ELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEG 339
Query: 384 VFSEILEKT 392
+F LE+
Sbjct: 340 LFRRALEEN 348
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 25/186 (13%)
Query: 86 AKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQ 143
AK+ A+ Y QG LR AIAS G DIF++DGA + +
Sbjct: 115 AKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMM 174
Query: 144 IVFGSNVT--MAVQDPSYPAYVDSSVIMG----------QTGEFQKDAEKYGKIEYMRCT 191
+ N + V P YP Y S + G TG + ++ ++E R
Sbjct: 175 QLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSR 234
Query: 192 AENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYI 251
N + +P NPTG E +V+F K+ G +++ D Y I
Sbjct: 235 GIN-----------VRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENI 283
Query: 252 SDDNPR 257
DN +
Sbjct: 284 YVDNKK 289
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK 266
DI+F +PNNPTG + + + R++ A I++ D AYA + + ++ E K
Sbjct: 166 DIVFVTTPNNPTGDVTSLDDVERIINVAP---GIVIVDEAYAEFSPSPSATTLLEKYPTK 222
Query: 267 EVAIETSSFSKYAGFTGVRLGWTV 290
V + + SK F G RLG+ V
Sbjct: 223 LVV--SRTMSKAFDFAGGRLGYFV 244
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK 266
DI+F +PNNPTG + + + R++ A I++ D AYA + + ++ E K
Sbjct: 163 DIVFVTTPNNPTGDVTSLDDVERIINVAP---GIVIVDEAYAEFSPSPSATTLLEKYPTK 219
Query: 267 EVAIETSSFSKYAGFTGVRLGWTV 290
V + + SK F G RLG+ V
Sbjct: 220 LVV--SRTMSKAFDFAGGRLGYFV 241
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 65 VISLGIGDTTEPIPEVITSA--LAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTF---- 118
+I L +GD T ++TSA + K A+ +QE +GY G R A+A+ +
Sbjct: 35 IIKLSVGDPTLD-KNLLTSAAQIKKLKEAIDSQE-CNGYFPTVGSPEAREAVATWWRNSF 92
Query: 119 -----YKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTG 173
K +++ + S G+ + + + + V P +P Y
Sbjct: 93 VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHY----------- 141
Query: 174 EFQKDAEKYG-KIEYMRCTAENGFFPDLSTVAR-----TDIIFFCSPNNPTGAAATREQL 227
+ + YG + + C EN + DL + R T ++ +P+NP G+ +R+ +
Sbjct: 142 --ETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHV 199
Query: 228 TRLVQFAKDNGSIIVYDSAYA-LYISDDNPRSIFEIPGAKEVAIETSSFSKYAG---FTG 283
+V+ A++ + D YA + +P + F E + A G
Sbjct: 200 EDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPG 259
Query: 284 VRLGWTV 290
RLGW +
Sbjct: 260 WRLGWLL 266
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260
+ V+R D + +P+NPTG A + +L +L Q A G +++ D Y Y S F
Sbjct: 131 AQVSRDDCVVLANPSNPTGQALSAGELDQLRQRA---GKLLI-DETYVDY-------SSF 179
Query: 261 EIPGAK--EVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
G E + SFSK G G+RLG P EL+
Sbjct: 180 RARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELI 217
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR-SIFEIP 263
+T +I +P+NP G R +L + K + V D Y + + I +P
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 264 GAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
G E I S K TG ++GW P+ LL
Sbjct: 242 GMWERTITIGSAGKTFSLTGWKIGWAYGPEALL 274
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK 266
DI+F +PNNPTG + + + R++ A I++ D AYA + + ++ E K
Sbjct: 166 DIVFVTTPNNPTGDVTSLDDVERIINVAP---GIVIVDEAYAEFSPSPSATTLLEKYPTK 222
Query: 267 EVAIETSSFSKYAGFTGVRLGWTV 290
V + + S F G RLG+ V
Sbjct: 223 LVV--SRTMSXAFDFAGGRLGYFV 244
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 198 PDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257
PDL D +F C+PNNPTG R L + K ++ D A+ +I P
Sbjct: 145 PDL------DCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFI----PH 194
Query: 258 SIFEIPGAKEVA--IETSSFSKYAGFTGVRLGWTV 290
IP K+ S +K+ G+RLG+ V
Sbjct: 195 ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLV 229
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG 264
+T I++ C+PNNPTG + + + ++V D AY Y++ + +
Sbjct: 155 KTTIVWICNPNNPTGNYIELADIQAFLDRVPSD-VLVVLDEAYIEYVTPQPEKHEKLVRT 213
Query: 265 AKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
K + I T +FSK G R+G+ + KE++
Sbjct: 214 YKNLII-TRTFSKIYGLASARVGYGIADKEII 244
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF-EIPGAK 266
I++ +PNNPTG + + + N IV D AYA +++D RSI I
Sbjct: 144 IVYLVNPNNPTGTITPADVIEPWIASKPANTXFIV-DEAYAEFVNDPRFRSISPXITQGA 202
Query: 267 EVAIETSSFSKYAGFTGVRLGWTV 290
E I +FSK G R+G+ V
Sbjct: 203 ENIILLKTFSKIHAXAGXRVGYAV 226
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR-SIFEIP 263
+T +I +P+NP G R +L + K + V D Y + + I +P
Sbjct: 182 KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLP 241
Query: 264 GAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
G E I S TG ++GW P+ LL
Sbjct: 242 GMWERTITIGSAGXTFSLTGWKIGWAYGPEALL 274
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 126/328 (38%), Gaps = 52/328 (15%)
Query: 53 KAAHMLKYPDAEVISLGIGDTT-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLR 111
K A L+ ++ISL GD E IP + +AK L + Y G LR
Sbjct: 24 KKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKE--VLEKEPKSVMYTPANGIPELR 81
Query: 112 AAIASTF--YKDLGIEEGDIFVSDGAKCDISRL-QIVFGSNVTMAVQDPSYPAYVDSSVI 168
+A+ Y L + +I ++ G + L +++ + ++PSY +++ +
Sbjct: 82 EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY---INTLLA 138
Query: 169 MGQTGEFQKDAEKYGKIEY-------MRCTAENGFFPDLSTVARTDIIFFCSP--NNPTG 219
Q G KIE MR +L + + + P NP G
Sbjct: 139 FEQLG---------AKIEGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMG 189
Query: 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYI---SDDNPRSIFEIPGAKEVAIETSSFS 276
+ E+ L++ A +I+ D+AY D P + G VA + S
Sbjct: 190 VTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA---GTLS 246
Query: 277 KYAGFTGVRLGWTVIPKELL---FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPE 333
K G TG R+GW + E+L P+ DF C A ISQ L L
Sbjct: 247 KVLG-TGFRIGWIIAEGEILKKVLMQKQPI--DF----C-----APAISQYIALEYLKRG 294
Query: 334 GFKAVH---EVIGFYKENTDIIVETFNS 358
F+ H ++G YKE DI+++ +
Sbjct: 295 YFEKYHLEGALLG-YKEKRDIMLKALEN 321
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 120/306 (39%), Gaps = 37/306 (12%)
Query: 61 PDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAS 116
P+ VISL IGD T P +T A+ AL + + Y+GY G R +AS
Sbjct: 29 PNKTVISLSIGDPTVFGNLPTDPEVTQAMKD---ALDSGK-YNGYAPSIGYLSSREEVAS 84
Query: 117 TFY-KDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMG-QTG 173
++ + +E D+ ++ G I L ++ + + P + Y + MG +
Sbjct: 85 YYHCPEAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVK 144
Query: 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQF 233
+ EK +I+ + + +T + +P+NP G+ ++ L +++
Sbjct: 145 LYNLLPEKSWEIDLKQLES--------LIDEKTACLVVNNPSNPCGSVFSKRHLQKILAV 196
Query: 234 AKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI-P 292
A+ I+ D Y + D + + G RLGW +I
Sbjct: 197 AERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHD 256
Query: 293 KELLF----SDGFPVAKDFNRIV--CTCFNGA-SNISQAGGLACLSPEGFKAVHEVIGFY 345
+ +F DG + K RI+ CT GA +I Q +P+ F + + F
Sbjct: 257 RRDIFGNEIRDG--LVKLSQRILGPCTIVQGALKSILQR------TPQEF--YQDTLSFL 306
Query: 346 KENTDI 351
K N D+
Sbjct: 307 KSNADL 312
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN---PRSIFE 261
RT + SP+NPTGA + +L + + A +++ D Y + D P + F+
Sbjct: 160 RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFD 219
Query: 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
G E I SS + TG ++GW P EL+
Sbjct: 220 --GMAERTITISSAAXMFNCTGWKIGWACGPAELI 252
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 209 IFFC-SPNNPTGAAATREQLTRLVQFAKDNGS--IIVYDSAYALYISDDNPRSIFEIPGA 265
IFFC +P+NP L R+ + ++ +I+ D Y + D +S+F I A
Sbjct: 248 IFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVYGTFA--DGFQSLFAICPA 305
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297
+ + SFSKY G TG RLG KE +F
Sbjct: 306 NTLLV--YSFSKYFGATGWRLGVVAAHKENIF 335
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 195 GFFPDLSTVARTDIIFFCS-PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253
G D+S + II + +NPTG +EQ L K + +D AY + S
Sbjct: 164 GAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASG 223
Query: 254 DNPRSIFEIPGAKEVAIE---TSSFSKYAGFTGVRLG-WTVIPKE 294
D R + + E I+ + S++K G G R G +TVI ++
Sbjct: 224 DINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRD 268
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 202 TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261
V D++F +PNNPTG RE++ R+++ G+ + D AY + + S +
Sbjct: 135 NVGEGDVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVD 186
Query: 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNI 321
E +FSK R+G+ V ++ F D +NR V FN S +
Sbjct: 187 FLKKYENLAVIRTFSKAFSLAAQRVGYVVASEK--FIDA------YNR-VRLPFN-VSYV 236
Query: 322 SQAGGLACLSPEGFKAVHEVIGFYKENTDIIVE 354
SQ L H I ++E T IVE
Sbjct: 237 SQMFAKVALD-------HREI--FEERTKFIVE 260
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 27/153 (17%)
Query: 202 TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261
V D++F +PNNPTG RE++ R+++ G+ + D AY + + S +
Sbjct: 147 NVGEGDVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVD 198
Query: 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNI 321
E +FSK R+G+ V ++ F D +NR V FN S +
Sbjct: 199 FLKKYENLAVIRTFSKAFSLAAQRVGYVVASEK--FIDA------YNR-VRLPFN-VSYV 248
Query: 322 SQAGGLACLSPEGFKAVHEVIGFYKENTDIIVE 354
SQ L H I ++E T IVE
Sbjct: 249 SQMFAKVALD-------HREI--FEERTKFIVE 272
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 202 TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261
V D++F +PNNPTG RE++ R+++ G+ + D AY + + S +
Sbjct: 135 NVGEGDVVFIPNPNNPTGHVFEREEIERILK----TGAFVALDEAYYEFHGE----SYVD 186
Query: 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTV 290
E +FSK R+G+ V
Sbjct: 187 FLKKYENLAVIRTFSKAFSLAAQRVGYVV 215
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 209 IFFC-SPNNPTGAAATREQLTRLVQFAKDNGS--IIVYDSAYALYISDDNPRSIFEIPGA 265
IFFC +P+NP + L R+ ++ +I+ D Y + D+ +S+F I
Sbjct: 248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFA--DDFQSLFAI--C 303
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297
E + SFSKY G TG RLG ++ +F
Sbjct: 304 PENTLLVYSFSKYFGATGWRLGVVAAHQQNVF 335
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 209 IFFC-SPNNPTGAAATREQLTRLVQFAKDNGS--IIVYDSAYALYISDDNPRSIFEIPGA 265
IFFC +P+NP + L R+ ++ +I+ D Y + D+ +S+F I
Sbjct: 248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFA--DDFQSLFAI--C 303
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297
E + SFSKY G TG RLG ++ +F
Sbjct: 304 PENTLLVYSFSKYFGATGWRLGVVAAHQQNVF 335
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 52/233 (22%)
Query: 43 GYLFPEIARRKAAHMLKY---PDAEVISLGIG---DTT--EPIPEVITSALAKRSYALST 94
G L P+ + A M ++ P I LG+G D T PI + +A +R T
Sbjct: 3 GNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAA-EQRMLETET 61
Query: 95 QEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS-RLQIVFGS----- 148
+ Y+G E F K +G ++ + DG K + + L V G+
Sbjct: 62 TKTYAGLSGE-----------PEFQKAMG----ELILGDGLKSETTATLATVGGTGALRQ 106
Query: 149 ----------NVTMAVQDPSYPAYVDSSVIMGQTGEFQK--DAEKYGKIEYMRCTAENGF 196
++ + V DP++P +V MG + + DAE G +++ G
Sbjct: 107 ALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRG-VDF------EGM 159
Query: 197 FPDLSTVARTDIIFF--CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
DL+ + D++ C +NPTGA T +Q + + G++ + D AY
Sbjct: 160 KADLAAAKKGDMVLLHGCC-HNPTGANLTLDQWAEIASILEKTGALPLIDLAY 211
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS-DDNPRSIFEIPGAK 266
+IF C PNNP G + T ++ ++ ++V D+AY + S D+ + + K
Sbjct: 156 LIFLCLPNNPLGECLDASEATEFIKGVNED-CLVVIDAAYNEFASFKDSKKHLEPCELIK 214
Query: 267 EV--AIETSSFSKYAGFTGVRLGWTV 290
E + +FS G G+R+G+ +
Sbjct: 215 EFDNVLYLGTFSXLYGLGGLRIGYGI 240
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 195 GFFPDLSTVARTDIIFFCS-PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253
G D+S + II + +NPTG +EQ L K + +D AY + S
Sbjct: 164 GAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASG 223
Query: 254 DNPRSIFEIPGAKEVAIE---TSSFSKYAGFTGVRLG-WTVIPKE 294
D R + + E I+ + S++ G G R G +TVI ++
Sbjct: 224 DINRDAWALRHFIEQGIDVVLSQSYAHNMGLYGERAGAFTVICRD 268
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS-IFEIPGAK 266
+++ CSPNNPTG + L++ + +I+V D AY + + + E P
Sbjct: 149 VVYVCSPNNPTGQLINPQDFRTLLELTRGK-AIVVADEAYIEFCPQASLAGWLAEYP--- 204
Query: 267 EVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
+AI + SK G+R G+T+ +E++
Sbjct: 205 HLAI-LRTLSKAFALAGLRCGFTLANEEVI 233
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS-IFEIPGAK 266
+++ CSPNNPTG + L++ + +I+V D AY + + + E P
Sbjct: 149 VVYVCSPNNPTGQLINPQDFRTLLELTRGK-AIVVADEAYIEFCPQASLAGWLAEYP--- 204
Query: 267 EVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
+AI + SK G+R G+T+ +E++
Sbjct: 205 HLAI-LRTLSKAFALAGLRCGFTLANEEVI 233
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 194 NGFFPDLSTVARTDIIFFCS-PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252
NGF + I S +NPTG T EQ ++V I ++D+AY + +
Sbjct: 164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFAT 223
Query: 253 DDNPRSIFEIP-GAKEVAIET-----SSFSKYAGFTGVRLG 287
D + + + G ++++ + SF+K AG G R+G
Sbjct: 224 GDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVG 264
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA-LYISDDNPRSIFEIPGA- 265
I CSP+NP G + L ++ + K +G I+V D + L + + S+ + +
Sbjct: 197 IYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASY 256
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296
K+ I SS +K G + + +I E L
Sbjct: 257 KDFTIILSSATKTFNIAGTKNSFAIIQNESL 287
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 188 MRCTAENGFFPDLSTVA-----------RTDIIFFCSPNNPTGAAATREQLTRLVQFAKD 236
+ CT+ NGF + + R + +P+NP G TR +L L+ F +D
Sbjct: 146 IHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVED 205
Query: 237 NGSIIVYDSAYA 248
G ++ D Y+
Sbjct: 206 KGIHLISDEIYS 217
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 175 FQKDAEKYGKIEY--MRCTAENGFFPDLSTVA-----------RTDIIFFCSPNNPTGAA 221
F +D + +E + CT+ NGF + + R + +P+NP G
Sbjct: 146 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 205
Query: 222 ATREQLTRLVQFAKDNGSIIVYDSAYA 248
TR +L L+ F +D G ++ D Y+
Sbjct: 206 MTRNELYLLLSFVEDKGIHLISDEIYS 232
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F S +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGSCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 175 FQKDAEKYGKIEY--MRCTAENGFFPDLSTVA-----------RTDIIFFCSPNNPTGAA 221
F +D + +E + CT+ NGF + + R + +P+NP G
Sbjct: 148 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207
Query: 222 ATREQLTRLVQFAKDNGSIIVYDSAYA 248
TR +L L+ F +D G ++ D Y+
Sbjct: 208 MTRNELYLLLSFVEDKGIHLISDEIYS 234
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 175 FQKDAEKYGKIEY--MRCTAENGFFPDLSTVA-----------RTDIIFFCSPNNPTGAA 221
F +D + +E + CT+ NGF + + R + +P+NP G
Sbjct: 148 FDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT 207
Query: 222 ATREQLTRLVQFAKDNGSIIVYDSAYA 248
TR +L L+ F +D G ++ D Y+
Sbjct: 208 MTRNELYLLLSFVEDKGIHLISDEIYS 234
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 79/225 (35%), Gaps = 17/225 (7%)
Query: 160 PAYVDSSVIMGQTGEFQ----KDAEKYGKIEY-MRCTAENGFFPDLSTVARTDI-IFFCS 213
P YV S G F KD Y + R GF DL I +
Sbjct: 132 PVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHAC 191
Query: 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIE-- 271
+NPTG T EQ ++ K +DSAY + S + + + I E
Sbjct: 192 AHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELF 251
Query: 272 -TSSFSKYAGFTGVRLG-WTVIPKELLFSDGFPVAKDFNRIV-CTCFNGASNISQAGGLA 328
SFSK G R+G TV+ KE V +IV T N + ++
Sbjct: 252 CAQSFSKNFGLYNERVGNLTVVAKEP--DSILRVLSQMQKIVRVTWSNPPAQGARIVART 309
Query: 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373
PE F HE G K D I+ + L ++ K P W
Sbjct: 310 LSDPELF---HEWTGNVKTMADRILSMRSELRARLEALK-TPGTW 350
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260
S ++ +F +NP+G T Q L+ K+ I +DSAY + + F
Sbjct: 198 SAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF 257
Query: 261 EIPGAKEVAIET---SSFSKYAGFTGVRLG 287
+ + +E SFSK G G R+G
Sbjct: 258 AVRMFVDAGVEVLVAQSFSKNFGLYGERIG 287
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 209 IFFC-SPNNPTGAAATREQLTRLVQFAKDNGS--IIVYDSAYALYISDDNPRSIFEIPGA 265
IFFC +P+NP + L R+ + +I+ D Y + D +S+F +
Sbjct: 247 IFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYGTFA--DEFQSLFSVCPR 304
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF 301
+ + SFSKY G TG RLG K+ +F
Sbjct: 305 NTLLV--YSFSKYFGATGWRLGVIAAHKDNVFDHAL 338
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 143/420 (34%), Gaps = 62/420 (14%)
Query: 35 GNLGKLQAGYLFPEIARRKAAHMLKYP----DAEVISLGIGDTT-EPIPEVITSALAKRS 89
G LG + Y F R + H K+ D +++ I D E +PEV A
Sbjct: 1 GPLGS--SKYNFQTAPNRLSHHTYKWKETETDPQLLPAWIADMDFEVMPEV---KQAIHD 55
Query: 90 YALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS-RLQIVFGS 148
YA GY+ E + L + Y ++ DI +G IS +Q
Sbjct: 56 YAEQLVYGYTYASDELLQAVLDWEKSEHQY---SFDKEDIVFVEGVVPAISIAIQAFTKE 112
Query: 149 NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDI 208
+ + P YP + S + + K+ ENG F DI
Sbjct: 113 GEAVLINSPVYPPFARSVRLNNR------------KLVSNSLKEENGLFQIDFEQLENDI 160
Query: 209 I-------FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261
+ C+P+NP G RE L ++ + + I+V D + + F
Sbjct: 161 VENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFN 220
Query: 262 I--PGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCF---- 315
P K+ A+ SS +K G + + +I N +C F
Sbjct: 221 TVSPDFKDFALVLSSATKTFNIAGTKNSYAIIE---------------NPTLCAQFKHQQ 265
Query: 316 --NGASNISQAGGLACLSP--EGFKAVHEVIGFYKENTDIIVETF--NSLGFKVYGGKNA 369
N +S G +A + G + + +EN VE F + KV +
Sbjct: 266 LVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGT 325
Query: 370 PYVWVQFP--GRSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRGNVLEACKR 427
+W+ F G + +F+ + ++ V+ R++ + V E CKR
Sbjct: 326 YLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKR 385
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 194 NGFFPDLSTV-ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252
N L T+ AR+ ++ +NPTGA T +Q +++ K I D AY + +
Sbjct: 161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGA 220
Query: 253 --DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287
+++ +I I A A+ ++SFSK G R+G
Sbjct: 221 GMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVG 257
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 194 NGFFPDLSTVARTDIIFF--CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYI 251
+G D+S + ++ C+ +NPTG EQ + K +D AY +
Sbjct: 163 SGALEDISKIPEQSVLLLHACA-HNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFA 221
Query: 252 SDDNPRSIFEIPGAKEVAIET---SSFSKYAGFTGVRLG-WTVIPKE 294
S D + + + E I S++K G G R+G +TV+ K+
Sbjct: 222 SGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKD 268
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA-LYISDDNPRSIFEIP-GAKEV 268
FC+P+NP G A + E++ R+ + + +++ D + L ++D++ F + AK
Sbjct: 166 FCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNW 225
Query: 269 AIETSSFSKYAGFTGVRLGWTVIP 292
+ S S + +IP
Sbjct: 226 VVSLISPSXTFNLAALHAACAIIP 249
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 194 NGFFPDL----STVARTD--IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
+G+F D+ + +A+ + I+ CSP NPTG T ++L + + +G ++ D +
Sbjct: 145 DGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIH 204
Query: 248 ALYISDDNPR 257
+ + P
Sbjct: 205 MDMVWGEQPH 214
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 53/145 (36%), Gaps = 10/145 (6%)
Query: 160 PAYVDSSVIMGQTGEFQ----KDAEKYGKIEY-MRCTAENGFFPDLSTVARTDIIFFCS- 213
P YV S F KD Y + R GF DL I+ +
Sbjct: 121 PVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHAC 180
Query: 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIE-- 271
+NPTG T EQ ++ K +DSAY + S + R + I E
Sbjct: 181 AHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFF 240
Query: 272 -TSSFSKYAGFTGVRLG-WTVIPKE 294
SFSK G R+G TV+ KE
Sbjct: 241 CAQSFSKNFGLYNERVGNLTVVGKE 265
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 21/154 (13%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKE 267
I SPNNP G RE + V D+ + +++D AY Y P I ++
Sbjct: 160 IELVTSPNNPDGT--IRETV---VNRPDDDEAKVIHDFAY--YWPHYTP-----ITRRQD 207
Query: 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 327
I +FSK G G R+GW ++ + VAK + G S SQ
Sbjct: 208 HDIMLFTFSKITGHAGSRIGWALVKDK-------EVAKKMVEYIIVNSIGVSKESQVRTA 260
Query: 328 ACLS--PEGFKAVHEVIGFYKENTDIIVETFNSL 359
L+ E K+ E F+K +++ + L
Sbjct: 261 KILNVLKETCKSESESENFFKYGREMMKNRWEKL 294
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 20/169 (11%)
Query: 186 EYMRCTAEN------GFFPDLSTVARTDIIFF---CSPNNPTGAAATREQLTRLVQFAKD 236
EY AEN L+ D++ F C +NPTG T EQ L Q + +
Sbjct: 146 EYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGWC--HNPTGIDPTLEQWQTLAQLSVE 203
Query: 237 NGSIIVYDSAYALYIS--DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294
G + ++D AY + +++ + + I SS+SK G R+G
Sbjct: 204 KGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACT---- 259
Query: 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGG---LACLSPEGFKAVHE 340
L+ +D V + F+++ SN G LS + +A+ E
Sbjct: 260 LVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWE 308
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 20/169 (11%)
Query: 186 EYMRCTAEN------GFFPDLSTVARTDIIFF---CSPNNPTGAAATREQLTRLVQFAKD 236
EY AEN L+ D++ F C +NPTG T EQ L Q + +
Sbjct: 146 EYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGYC--HNPTGIDPTLEQWQTLAQLSVE 203
Query: 237 NGSIIVYDSAYALYIS--DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294
G + ++D AY + +++ + + I SS+SK G R+G
Sbjct: 204 KGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACT---- 259
Query: 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGG---LACLSPEGFKAVHE 340
L+ +D V + F+++ SN G LS + +A+ E
Sbjct: 260 LVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWE 308
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)
Query: 99 SGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQD 156
+ Y QG+ A+ F + D + +I +++G++ L +FG
Sbjct: 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQ 136
Query: 157 PSYPAYVDSSVIMGQTGEF----------QKDAEKYGKIEYMRCTAENGFFP-------- 198
VD S+++ T E+ Q A I+ + E GFF
Sbjct: 137 DKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEAL 196
Query: 199 -DLSTVARTDIIFFC--SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
+L + I C P NPTG T E+ L + AK ++ D+AY
Sbjct: 197 ENLPALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIDANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 197 FPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL 249
F L T I P NPTG T E+L +L + A + +V D+AY +
Sbjct: 172 FEHLHIGEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAYGV 224
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 20/169 (11%)
Query: 186 EYMRCTAEN------GFFPDLSTVARTDIIFF---CSPNNPTGAAATREQLTRLVQFAKD 236
EY AEN L+ D++ F C +NPTG T EQ L Q + +
Sbjct: 146 EYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGFC--HNPTGIDPTLEQWQTLAQLSVE 203
Query: 237 NGSIIVYDSAYALYIS--DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294
G + ++D AY + +++ + + I SS+SK G R+G
Sbjct: 204 KGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACT---- 259
Query: 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGG---LACLSPEGFKAVHE 340
L+ +D V + F+++ SN G LS + +A+ E
Sbjct: 260 LVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWE 308
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 78/225 (34%), Gaps = 17/225 (7%)
Query: 160 PAYVDSSVIMGQTGEFQ----KDAEKYGKIEY-MRCTAENGFFPDLSTVARTDI-IFFCS 213
P YV S G F KD Y + R GF DL I +
Sbjct: 132 PVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHAC 191
Query: 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIE-- 271
+NPTG T EQ ++ K +DSAY + S + + + I E
Sbjct: 192 AHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELF 251
Query: 272 -TSSFSKYAGFTGVRLG-WTVIPKELLFSDGFPVAKDFNRIV-CTCFNGASNISQAGGLA 328
SFS G R+G TV+ KE V +IV T N + ++
Sbjct: 252 CAQSFSXNFGLYNERVGNLTVVAKEP--DSILRVLSQMQKIVRVTWSNPPAQGARIVART 309
Query: 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373
PE F HE G K D I+ + L ++ K P W
Sbjct: 310 LSDPELF---HEWTGNVKTMADRILSMRSELRARLEALK-TPGTW 350
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+SK G R+G
Sbjct: 235 HKELIVASSYSKNFGLYNERVG 256
>pdb|1FCM|A Chain A, Crystal Structure Of The E.Coli Ampc Beta-Lactamase Mutant
Q120lY150E Covalently Acylated With The Inhibitory
Beta-Lactam, Cloxacillin
pdb|1FCM|B Chain B, Crystal Structure Of The E.Coli Ampc Beta-Lactamase Mutant
Q120lY150E Covalently Acylated With The Inhibitory
Beta-Lactam, Cloxacillin
pdb|1FCN|A Chain A, Crystal Structure Of The E. Coli Ampc Beta-Lactamase
Mutant Q120lY150E COVALENTLY ACYLATED WITH THE SUBSTRATE
BETA-Lactam Loracarbef
pdb|1FCN|B Chain B, Crystal Structure Of The E. Coli Ampc Beta-Lactamase
Mutant Q120lY150E COVALENTLY ACYLATED WITH THE SUBSTRATE
BETA-Lactam Loracarbef
pdb|1O07|A Chain A, Crystal Structure Of The Complex Between Q120lY150E MUTANT
OF AMPC And A Beta-Lactam Inhibitor (Mxg)
pdb|1O07|B Chain B, Crystal Structure Of The Complex Between Q120lY150E MUTANT
OF AMPC And A Beta-Lactam Inhibitor (Mxg)
Length = 358
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 263 PGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNIS 322
P ++ E S SK FTGV G + E+ SD P K + + +NG + +
Sbjct: 50 PVTQQTLFELGSVSKT--FTGVLGGDAIARGEIKLSD--PTTKYWPELTAKQWNGITLLH 105
Query: 323 ----QAGGLACLSPEGFKAVHEVIGFYK 346
AGGL L P+ K+ +++ FY+
Sbjct: 106 LATYTAGGLPLLVPDEVKSSSDLLRFYQ 133
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D A + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAQQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ + SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIYANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 194 NGFFPDLSTVARTDIIFF--CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYI 251
N L T+ I+ C +NPTGA T +Q +++ K I D AY +
Sbjct: 161 NDLLATLKTLQAGSIVLLHPCC-HNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFG 219
Query: 252 S--DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287
+ +++ +I I A A+ ++SFSK G R+G
Sbjct: 220 AGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVG 257
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 194 NGFFPDLSTVARTDIIFF--CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYI 251
+G D+S + ++ C+ +NPTG EQ + K +D AY +
Sbjct: 163 SGALEDISKIPEQSVLLLHACA-HNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFA 221
Query: 252 SDDNPRSIFEIPGAKEVAIETSSFSKYA---GFTGVRLG-WTVIPKE 294
S D + + + E I YA G G R+G +TV+ K+
Sbjct: 222 SGDGDKDAWAVRHFIEQGINVCLCQSYAXNMGLYGERVGAFTVVCKD 268
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D A+ + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F + PTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAILANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHEVIGFYKENTDI 351
LS + +A+ E +E TD+
Sbjct: 291 ASVVATILSNDALRAIWE-----QELTDM 314
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F + PTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAILANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1LK9|A Chain A, The Three-Dimensional Structure Of Alliinase From Garlic
pdb|1LK9|B Chain B, The Three-Dimensional Structure Of Alliinase From Garlic
Length = 448
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 27/138 (19%)
Query: 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIET 272
SPNNP G L++ A G +YD Y Y P I + I
Sbjct: 204 SPNNPEG----------LLRHAVIKGCKSIYDMVY--YWPHYTP-----IKYKADEDILL 246
Query: 273 SSFSKYAGFTGVRLGWTVIPKELLF----------SDGFPVAKDFNRIVCTCFNGASNIS 322
+ SK+ G +G R GW +I E ++ ++G P + A +
Sbjct: 247 FTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKT 306
Query: 323 QAGGLACLSPEGFKAVHE 340
Q G + L+ GFK + E
Sbjct: 307 QKGTMRDLNTFGFKKLRE 324
>pdb|2HOR|A Chain A, Crystal Structure Of Alliinase From Garlic- Apo Form
pdb|2HOX|A Chain A, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|B Chain B, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|C Chain C, Alliinase From Allium Sativum (Garlic)
pdb|2HOX|D Chain D, Alliinase From Allium Sativum (Garlic)
Length = 427
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 27/138 (19%)
Query: 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIET 272
SPNNP G L++ A G +YD Y Y P I + I
Sbjct: 204 SPNNPEG----------LLRHAVIKGCKSIYDMVY--YWPHYTP-----IKYKADEDILL 246
Query: 273 SSFSKYAGFTGVRLGWTVIPKELLF----------SDGFPVAKDFNRIVCTCFNGASNIS 322
+ SK+ G +G R GW +I E ++ ++G P + A +
Sbjct: 247 FTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKT 306
Query: 323 QAGGLACLSPEGFKAVHE 340
Q G + L+ GFK + E
Sbjct: 307 QKGTMRDLNTFGFKKLRE 324
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+S G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSHNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 63/301 (20%)
Query: 40 LQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTT----EPI------------PEVITS 83
L+AG + E+ R +K P EVI IGD +PI P ++ S
Sbjct: 45 LKAGEIELELQRG-----IKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDS 99
Query: 84 A--------LAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTF-YKDLGI--EEGDIFVS 132
A+R Y A QG +R +A+ +D G+ + +I+++
Sbjct: 100 PSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLT 159
Query: 133 DGAKCDISR-LQIVFG----SNVTMAVQDPSYPAYVDSSVIMGQTGEFQ----KDAEKYG 183
GA IS L+I+ S + + P YP Y S ++ + Q D E
Sbjct: 160 TGASDGISTILKILVSGGGKSRTGVMIPIPQYPLY---SAVISELDAIQVNYYLDEENCW 216
Query: 184 KI---EYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSI 240
+ E R E D ++ +P NPTG +R+ + ++ FA +
Sbjct: 217 ALNVNELRRAVQEAKDHCD------PKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLF 270
Query: 241 IVYDSAYALYISDDNPR------SIFEIPGAKEVAIETSSFSK----YAGFTGVRLGWTV 290
++ D Y + + R ++E+ +E +SF Y G G R G+
Sbjct: 271 LLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYME 330
Query: 291 I 291
+
Sbjct: 331 V 331
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 185 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 244
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+S G R+G L+ +D V + F+++ SN G
Sbjct: 245 HKELIVASSYSXNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 300
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 301 ASVVATILSNDALRAIWE 318
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+S G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSXNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+S G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSANFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|3BWN|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWO|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWO|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWO|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWO|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKE 267
I SPNNP G RE + V D+ + +++D AY Y P I ++
Sbjct: 160 IELVTSPNNPDGT--IRETV---VNRPDDDEAKVIHDFAY--YWPHYTP-----ITRRQD 207
Query: 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 327
I +FS G G R+GW ++ + VAK + G S SQ
Sbjct: 208 HDIMLFTFSXITGHAGSRIGWALVKDK-------EVAKKMVEYIIVNSIGVSKESQVRTA 260
Query: 328 ACLS--PEGFKAVHEVIGFYKENTDIIVETFNSL 359
L+ E K+ E F+K +++ + L
Sbjct: 261 KILNVLKETCKSESESENFFKYGREMMKNRWEKL 294
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA 248
+ F +PNNP G + E++ ++ A G+ ++ D Y+
Sbjct: 182 VFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYS 222
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR--SIFEIPGAK 266
+ +P+NP G ++ L ++ F + +V D YA + D P+ SI EI +
Sbjct: 192 LILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVF-DTPQFVSIAEILDEQ 250
Query: 267 EVAIETS-------SFSKYAGFTGVRLG 287
E+ S SK G G R+G
Sbjct: 251 EMTYCNKDLVHIVYSLSKDMGLPGFRVG 278
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+S G R+G
Sbjct: 235 HKELIVASSYSXNFGLYNERVG 256
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
I + +PNNPT T E+L + + A + I++ D AY
Sbjct: 186 IIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAY 224
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAK---DNGS---IIVYDSAYALYISDDNPRSIF 260
I+ PNNPTG T +++T +V+ K + G+ +V D+ Y L+ D +S+F
Sbjct: 192 IMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLF 250
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F + PTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTGA T EQ L Q + + G + + D AY + +++ +
Sbjct: 185 VLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRGLEEDAEGLRAFAAM 244
Query: 266 KEVAIETSSFSKYAGFTGVRLG 287
+ I SS+S G R+G
Sbjct: 245 HKELIVASSYSXNFGLYNERVG 266
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
++F +NPTGA T EQ L Q + + G + + D AY
Sbjct: 185 VLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAY 224
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
++F +NPTGA T EQ L Q + + G + + D AY
Sbjct: 185 VLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAY 224
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F + PTG T EQ L Q + + G + ++D AY + +++ +
Sbjct: 175 VLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
++F +NPTGA T EQ L Q + + G + + D AY
Sbjct: 185 VLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAY 224
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++ AY + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFAFAYQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + ++D A + +++ +
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFARQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
++F +NPTG T EQ L Q + + G + ++D AY
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAY 214
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY 247
++F +NPTG T EQ L Q + + G + ++D AY
Sbjct: 175 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAY 214
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F + PTG T EQ L Q + + G + ++D A+ + +++ +
Sbjct: 175 VLFHGCCHAPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAFQGFARGLEEDAEGLRAFAAM 234
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+SK G R+G L+ +D V + F+++ SN G
Sbjct: 235 HKELIVASSYSKNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 290
Query: 326 G---LACLSPEGFKAVHE 340
LS + +A+ E
Sbjct: 291 ASVVATILSNDALRAIWE 308
>pdb|2RKW|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|2RKW|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|3B2Q|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|3B2Q|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|3EIU|A Chain A, A Second Transient Position Of Atp On Its Trail To The
Nucleotide- Binding Site Of Subunit B Of The Motor
Protein A1ao Atp Synthase
pdb|3EIU|B Chain B, A Second Transient Position Of Atp On Its Trail To The
Nucleotide- Binding Site Of Subunit B Of The Motor
Protein A1ao Atp Synthase
Length = 469
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 72/198 (36%), Gaps = 40/198 (20%)
Query: 96 EGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVF--GSNVTMA 153
E GA + E P R Y DL + GAK ++++ I+ G ++T
Sbjct: 263 EALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHP 322
Query: 154 VQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCS 213
+ D S Y+ G+I R G +P ++ + +
Sbjct: 323 IPDLS--GYITE-----------------GQIVVARELHRKGIYPPINVLPSLSRLM--- 360
Query: 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETS 273
N+ GA TRE D+ + V D YA Y + R + I G + ++ +
Sbjct: 361 -NSGIGAGKTRE----------DHKA--VSDQMYAGYAEGRDLRGLVAIVGKEALSERDT 407
Query: 274 SFSKYAGF---TGVRLGW 288
F ++A VR GW
Sbjct: 408 KFLEFADLFEDKFVRQGW 425
>pdb|2YLL|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 454
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETS 273
N+P G T Q+T L+ +AKD G L + ++P + I A KE+ I+
Sbjct: 102 NDPNGNHLTESQMTDLINYAKDKG--------IGLIPTVNSPGHMDAILNAMKELGIQNP 153
Query: 274 SFS 276
+FS
Sbjct: 154 NFS 156
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 14/149 (9%)
Query: 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS--DDNPRSIFEIPGA 265
++F +NPTG T EQ L Q + + G + + D AY + +++ +
Sbjct: 185 VLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGRGLEEDAEGLRAFAAM 244
Query: 266 KEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG 325
+ I SS+S G R+G L+ +D V + F+++ SN G
Sbjct: 245 HKELIVASSYSXNFGLYNERVGACT----LVAADSETVDRAFSQMKAAIRANYSNPPAHG 300
Query: 326 G---LACLSPEGFKAVHEVIGFYKENTDI 351
LS + +A+ E +E TD+
Sbjct: 301 ASVVATILSNDALRAIWE-----QELTDM 324
>pdb|2YL6|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 434
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETS 273
N+P G T Q+T L+ +AKD G L + ++P + I A KE+ I+
Sbjct: 82 NDPNGNHLTESQMTDLINYAKDKG--------IGLIPTVNSPGHMDAILNAMKELGIQNP 133
Query: 274 SFS 276
+FS
Sbjct: 134 NFS 136
>pdb|2YL8|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 434
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETS 273
N+P G T Q+T L+ +AKD G L + ++P + I A KE+ I+
Sbjct: 82 NDPNGNHLTESQMTDLINYAKDKG--------IGLIPTVNSPGHMDAILNAMKELGIQNP 133
Query: 274 SFS 276
+FS
Sbjct: 134 NFS 136
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSI-IVYDSAYALYISDDNPRSIFEIPGAKE 267
+ +P NPT L + Q + N + I+ D Y ++ N +SI+ +
Sbjct: 248 LIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYGAFVP--NFKSIYSVVPYNT 305
Query: 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDG 300
+ S+S G TG RLG + ++ +F D
Sbjct: 306 XLV--YSYSXLFGCTGWRLGVIALNEKNVFDDN 336
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 208 IIFFCSPNNPTGA---AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG 264
I++ PNNPTG AA E + R Q + S++V D AY + + + + G
Sbjct: 160 IVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCR-SLVVVDEAYQPFAQESWXSRLTDF-G 217
Query: 265 AKEVAIETSSFSKYAGFTGVRLGWT 289
V S G G+RLG+
Sbjct: 218 NLLVXRTVSKL----GLAGIRLGYV 238
>pdb|3BHN|A Chain A, Crystal Structure Of A Dj-1PFPI-Like Protein (Shew_2856)
From Shewanella Loihica Pv-4 At 1.76 A Resolution
Length = 236
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 18 AAPQEEKIAYKTKVSRNGNL-GKLQAG-YLFPEIARRKAAHMLKYPDAEVISLGIGDTTE 75
AA Q+E K+ + L G + AG ++ E+ K + PDA+ + G G +
Sbjct: 95 AALQDENFXSALKLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGXGGDVQ 154
Query: 76 PIPEVITSALAKRSYALS 93
+P VI +A LS
Sbjct: 155 DLPLVIEGNIATAGGCLS 172
>pdb|3TW5|A Chain A, Crystal Structure Of The Gp42 Transglutaminase From
Phytophthora Sojae
pdb|3TW5|B Chain B, Crystal Structure Of The Gp42 Transglutaminase From
Phytophthora Sojae
Length = 367
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 15/61 (24%)
Query: 138 DISRLQIVFGSNVTMAVQD--------------PSYPAYVDSSVIMGQTGEFQKDAEKYG 183
DI++L+ FG+ + M ++D P +P Y DS + G+ AEKY
Sbjct: 7 DIAKLEAYFGTKMEMTLKDLPTVGVHTPSPWAGPYWPTYQDSINVQWSQGQ-PSAAEKYA 65
Query: 184 K 184
K
Sbjct: 66 K 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,092,599
Number of Sequences: 62578
Number of extensions: 541873
Number of successful extensions: 1510
Number of sequences better than 100.0: 144
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1359
Number of HSP's gapped (non-prelim): 146
length of query: 433
length of database: 14,973,337
effective HSP length: 102
effective length of query: 331
effective length of database: 8,590,381
effective search space: 2843416111
effective search space used: 2843416111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)