Query 045431
Match_columns 433
No_of_seqs 209 out of 2643
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 13:09:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045431.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045431hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1167 ARO8 Transcriptional r 100.0 1.8E-62 3.8E-67 477.8 34.1 406 2-432 11-453 (459)
2 COG0436 Aspartate/tyrosine/aro 100.0 6.6E-60 1.4E-64 449.8 40.5 346 63-433 28-390 (393)
3 PRK15481 transcriptional regul 100.0 3E-59 6.4E-64 457.0 32.8 398 2-433 12-430 (431)
4 PRK07590 L,L-diaminopimelate a 100.0 8.4E-58 1.8E-62 443.7 41.7 397 34-432 5-409 (409)
5 TIGR03542 DAPAT_plant LL-diami 100.0 4.6E-56 9.9E-61 430.6 41.5 399 32-432 2-402 (402)
6 PRK07366 succinyldiaminopimela 100.0 8.9E-55 1.9E-59 420.3 37.2 347 61-432 28-388 (388)
7 PLN00175 aminotransferase fami 100.0 6.6E-54 1.4E-58 415.5 38.2 344 63-433 54-412 (413)
8 PRK07681 aspartate aminotransf 100.0 1.2E-53 2.5E-58 413.6 37.9 343 62-430 31-384 (399)
9 PRK08636 aspartate aminotransf 100.0 2.9E-53 6.3E-58 411.1 39.0 347 62-433 32-399 (403)
10 PRK06348 aspartate aminotransf 100.0 4E-53 8.6E-58 407.8 37.9 343 63-431 29-382 (384)
11 PRK09148 aminotransferase; Val 100.0 4.7E-53 1E-57 409.4 38.0 347 61-432 28-388 (405)
12 KOG0257 Kynurenine aminotransf 100.0 2E-54 4.3E-59 390.1 25.7 362 44-430 18-415 (420)
13 PRK08068 transaminase; Reviewe 100.0 6.4E-53 1.4E-57 407.3 37.7 345 62-431 31-386 (389)
14 TIGR03540 DapC_direct LL-diami 100.0 1.6E-52 3.4E-57 404.1 38.4 344 62-430 28-382 (383)
15 PRK06207 aspartate aminotransf 100.0 2.2E-52 4.7E-57 404.4 37.7 345 63-432 39-400 (405)
16 PRK07682 hypothetical protein; 100.0 1.7E-52 3.8E-57 403.2 36.8 344 64-433 21-375 (378)
17 PRK09276 LL-diaminopimelate am 100.0 3.7E-52 7.9E-57 401.9 38.5 345 61-430 29-384 (385)
18 PRK08960 hypothetical protein; 100.0 3.2E-52 6.9E-57 402.2 37.8 345 61-433 30-386 (387)
19 PRK06290 aspartate aminotransf 100.0 9.8E-52 2.1E-56 399.2 38.9 359 43-432 24-403 (410)
20 PRK09147 succinyldiaminopimela 100.0 6.8E-52 1.5E-56 401.1 37.1 343 61-433 27-395 (396)
21 PRK05942 aspartate aminotransf 100.0 8.7E-52 1.9E-56 399.9 37.8 346 61-431 33-389 (394)
22 PRK06855 aminotransferase; Val 100.0 4.4E-52 9.5E-57 405.2 34.9 352 62-432 31-427 (433)
23 PRK05839 hypothetical protein; 100.0 2.1E-51 4.5E-56 394.0 38.7 337 62-433 23-373 (374)
24 PLN00143 tyrosine/nicotianamin 100.0 2.8E-51 6.2E-56 397.2 37.9 352 59-432 28-402 (409)
25 PLN02187 rooty/superroot1 100.0 2.4E-51 5.3E-56 401.3 37.6 350 60-432 63-436 (462)
26 PRK07683 aminotransferase A; V 100.0 4.1E-51 8.9E-56 394.0 38.0 343 63-432 28-381 (387)
27 PRK07337 aminotransferase; Val 100.0 5.6E-51 1.2E-55 393.9 37.9 345 61-433 28-388 (388)
28 PRK12414 putative aminotransfe 100.0 4.9E-51 1.1E-55 393.1 37.1 340 63-430 29-383 (384)
29 PRK08175 aminotransferase; Val 100.0 4.7E-51 1E-55 394.9 36.1 347 62-433 28-388 (395)
30 PLN00145 tyrosine/nicotianamin 100.0 6.9E-51 1.5E-55 395.7 37.2 349 62-432 51-422 (430)
31 TIGR03538 DapC_gpp succinyldia 100.0 6.6E-51 1.4E-55 393.8 36.3 342 61-432 26-393 (393)
32 COG1168 MalY Bifunctional PLP- 100.0 7.9E-51 1.7E-55 363.3 33.8 364 44-433 2-385 (388)
33 PLN02656 tyrosine transaminase 100.0 9.7E-51 2.1E-55 393.7 36.7 353 60-432 28-401 (409)
34 PRK08912 hypothetical protein; 100.0 1.2E-50 2.5E-55 391.5 37.0 344 63-433 26-385 (387)
35 PLN02450 1-aminocyclopropane-1 100.0 2.6E-51 5.7E-56 401.7 31.7 348 63-432 38-428 (468)
36 PRK09082 methionine aminotrans 100.0 1.3E-50 2.7E-55 390.7 35.6 342 63-431 30-386 (386)
37 PTZ00377 alanine aminotransfer 100.0 1.3E-50 2.7E-55 400.1 35.8 349 61-432 44-473 (481)
38 PRK13355 bifunctional HTH-doma 100.0 2E-50 4.4E-55 401.8 36.5 347 61-432 144-512 (517)
39 PRK06108 aspartate aminotransf 100.0 4.7E-50 1E-54 387.4 37.6 345 63-433 24-381 (382)
40 PRK06107 aspartate aminotransf 100.0 4E-50 8.7E-55 389.1 37.1 343 62-432 32-398 (402)
41 PRK07324 transaminase; Validat 100.0 1.1E-50 2.4E-55 388.5 32.7 337 61-432 24-368 (373)
42 PRK08361 aspartate aminotransf 100.0 3.6E-50 7.9E-55 388.4 36.5 344 63-433 33-389 (391)
43 PTZ00433 tyrosine aminotransfe 100.0 4.2E-50 9E-55 389.9 36.8 349 60-432 30-406 (412)
44 TIGR03537 DapC succinyldiamino 100.0 7.3E-50 1.6E-54 380.6 36.2 335 65-430 2-349 (350)
45 PRK07309 aromatic amino acid a 100.0 1.2E-49 2.6E-54 384.3 36.9 341 63-432 30-386 (391)
46 PLN02376 1-aminocyclopropane-1 100.0 3.6E-50 7.7E-55 394.8 32.8 348 64-432 47-436 (496)
47 TIGR01264 tyr_amTase_E tyrosin 100.0 1.4E-49 3.1E-54 385.5 36.5 349 61-433 29-398 (401)
48 PRK05957 aspartate aminotransf 100.0 2.7E-49 5.8E-54 381.6 37.2 346 63-433 27-384 (389)
49 PRK08363 alanine aminotransfer 100.0 2.5E-49 5.4E-54 383.5 37.0 344 61-432 28-392 (398)
50 PLN02607 1-aminocyclopropane-1 100.0 1.4E-49 2.9E-54 386.6 32.7 348 63-432 47-435 (447)
51 PRK07550 hypothetical protein; 100.0 1.4E-48 3E-53 377.0 37.5 345 61-431 27-384 (386)
52 PRK07777 aminotransferase; Val 100.0 1.4E-48 3.1E-53 376.9 37.4 343 64-432 25-384 (387)
53 PRK09265 aminotransferase AlaT 100.0 2.5E-48 5.4E-53 377.0 37.4 349 60-432 30-399 (404)
54 PRK07865 N-succinyldiaminopime 100.0 3.4E-48 7.3E-53 371.3 37.7 330 62-429 26-363 (364)
55 TIGR01265 tyr_nico_aTase tyros 100.0 4.9E-48 1.1E-52 374.6 37.8 349 61-432 29-399 (403)
56 PRK07568 aspartate aminotransf 100.0 7.3E-48 1.6E-52 373.8 37.6 342 63-432 30-390 (397)
57 PRK05764 aspartate aminotransf 100.0 1.1E-47 2.4E-52 372.0 37.1 344 62-433 30-390 (393)
58 TIGR03539 DapC_actino succinyl 100.0 2.2E-47 4.7E-52 364.3 37.5 329 62-428 20-356 (357)
59 PLN02231 alanine transaminase 100.0 4.1E-48 8.8E-53 382.1 33.3 346 63-432 129-525 (534)
60 PRK09275 aspartate aminotransf 100.0 9.4E-48 2E-52 374.0 32.5 359 49-432 79-515 (527)
61 KOG0259 Tyrosine aminotransfer 100.0 1.9E-46 4E-51 332.4 34.3 350 63-432 61-431 (447)
62 PRK09440 avtA valine--pyruvate 100.0 1.4E-46 3.1E-51 366.5 34.9 350 63-432 30-409 (416)
63 PRK14809 histidinol-phosphate 100.0 8.3E-47 1.8E-51 360.7 31.9 323 62-433 29-356 (357)
64 PRK06358 threonine-phosphate d 100.0 2.2E-46 4.9E-51 356.5 34.7 327 64-432 20-353 (354)
65 PRK07392 threonine-phosphate d 100.0 2E-46 4.4E-51 358.3 33.7 326 63-429 22-357 (360)
66 PTZ00376 aspartate aminotransf 100.0 9.2E-47 2E-51 365.6 29.8 340 63-432 29-401 (404)
67 PRK01533 histidinol-phosphate 100.0 2E-46 4.4E-51 357.4 30.5 321 62-432 28-353 (366)
68 PRK06836 aspartate aminotransf 100.0 2.8E-45 6.1E-50 354.3 36.8 342 63-433 33-390 (394)
69 PRK09257 aromatic amino acid a 100.0 3.9E-46 8.5E-51 360.7 30.3 336 63-432 26-396 (396)
70 PLN02672 methionine S-methyltr 100.0 2.2E-45 4.8E-50 377.5 37.3 378 13-432 658-1078(1082)
71 TIGR03801 asp_4_decarbox aspar 100.0 1.3E-45 2.8E-50 358.6 33.3 342 64-432 95-514 (521)
72 PRK07908 hypothetical protein; 100.0 4.5E-45 9.7E-50 347.7 35.2 326 60-432 19-345 (349)
73 PRK06425 histidinol-phosphate 100.0 1E-45 2.2E-50 349.1 29.7 315 64-433 17-332 (332)
74 PRK02610 histidinol-phosphate 100.0 5.6E-45 1.2E-49 349.7 32.5 324 64-432 29-369 (374)
75 PRK08056 threonine-phosphate d 100.0 1.4E-44 3.1E-49 344.8 34.5 328 62-432 19-353 (356)
76 PRK03158 histidinol-phosphate 100.0 4.3E-45 9.3E-50 349.5 30.6 325 64-432 30-359 (359)
77 PF00155 Aminotran_1_2: Aminot 100.0 7.4E-46 1.6E-50 355.9 24.7 336 64-428 2-363 (363)
78 PRK06225 aspartate aminotransf 100.0 1.1E-43 2.3E-48 342.2 36.1 336 62-432 27-374 (380)
79 PRK05166 histidinol-phosphate 100.0 2.3E-44 5E-49 345.3 30.7 326 62-428 35-368 (371)
80 PRK08153 histidinol-phosphate 100.0 3.1E-44 6.7E-49 343.7 31.2 324 64-432 33-363 (369)
81 PRK09105 putative aminotransfe 100.0 3.7E-44 7.9E-49 342.7 31.6 323 63-432 43-368 (370)
82 PRK05387 histidinol-phosphate 100.0 3.8E-44 8.2E-49 342.4 31.6 325 63-432 24-351 (353)
83 PLN02397 aspartate transaminas 100.0 2.1E-44 4.5E-49 349.9 29.8 341 62-432 47-419 (423)
84 COG0079 HisC Histidinol-phosph 100.0 8.1E-44 1.8E-48 333.3 31.2 323 64-432 23-352 (356)
85 PLN02368 alanine transaminase 100.0 1.9E-44 4.2E-49 346.0 26.5 292 62-377 37-396 (407)
86 PRK03317 histidinol-phosphate 100.0 1.6E-43 3.5E-48 339.5 31.8 329 64-432 27-362 (368)
87 PRK04870 histidinol-phosphate 100.0 2E-43 4.2E-48 337.5 32.2 324 63-432 26-356 (356)
88 PLN03026 histidinol-phosphate 100.0 1.8E-43 3.9E-48 339.3 31.8 323 62-431 51-379 (380)
89 PRK08637 hypothetical protein; 100.0 8.8E-44 1.9E-48 343.2 29.6 341 66-433 6-385 (388)
90 PRK14808 histidinol-phosphate 100.0 4.2E-43 9.1E-48 331.1 32.9 317 62-431 18-334 (335)
91 PRK02731 histidinol-phosphate 100.0 7.9E-43 1.7E-47 335.0 31.2 330 61-433 30-365 (367)
92 PRK04781 histidinol-phosphate 100.0 1.3E-42 2.8E-47 331.7 30.6 319 64-431 32-360 (364)
93 PRK06959 putative threonine-ph 100.0 7.9E-42 1.7E-46 322.7 32.2 307 63-432 24-331 (339)
94 PRK14807 histidinol-phosphate 100.0 1.1E-41 2.3E-46 324.4 33.3 322 64-432 23-350 (351)
95 PRK04635 histidinol-phosphate 100.0 1.5E-42 3.4E-47 330.5 27.5 318 63-431 31-352 (354)
96 PRK01688 histidinol-phosphate 100.0 2.1E-42 4.5E-47 328.9 27.5 316 64-429 29-351 (351)
97 TIGR01141 hisC histidinol-phos 100.0 3.3E-42 7.1E-47 328.1 28.5 323 63-429 19-346 (346)
98 PRK05664 threonine-phosphate d 100.0 1.8E-41 3.8E-46 319.8 31.8 305 64-432 21-326 (330)
99 PRK00950 histidinol-phosphate 100.0 2.1E-41 4.5E-46 324.5 30.8 323 63-433 34-361 (361)
100 KOG0256 1-aminocyclopropane-1- 100.0 2E-41 4.4E-46 303.1 26.3 315 98-432 114-459 (471)
101 PRK03967 histidinol-phosphate 100.0 5.7E-41 1.2E-45 317.2 30.5 311 63-429 18-332 (337)
102 PRK03321 putative aminotransfe 100.0 4E-41 8.7E-46 321.2 29.5 322 64-432 23-349 (352)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 3.1E-41 6.7E-46 318.3 28.4 313 62-428 16-329 (330)
104 PRK08354 putative aminotransfe 100.0 1.2E-39 2.6E-44 304.9 32.0 300 64-430 9-308 (311)
105 KOG0634 Aromatic amino acid am 100.0 2.2E-40 4.9E-45 298.9 24.9 314 97-433 92-465 (472)
106 cd00609 AAT_like Aspartate ami 100.0 1.4E-35 3E-40 283.2 35.2 339 66-430 1-350 (350)
107 PRK13238 tnaA tryptophanase/L- 100.0 6E-33 1.3E-37 269.8 29.8 332 60-432 33-431 (460)
108 COG3977 Alanine-alpha-ketoisov 100.0 2.4E-32 5.3E-37 235.2 27.3 343 63-432 30-409 (417)
109 TIGR03576 pyridox_MJ0158 pyrid 100.0 5E-32 1.1E-36 255.1 31.2 307 75-433 32-346 (346)
110 TIGR00858 bioF 8-amino-7-oxono 100.0 6.4E-32 1.4E-36 259.1 29.4 331 61-429 14-360 (360)
111 PRK06939 2-amino-3-ketobutyrat 100.0 2.9E-31 6.3E-36 257.9 28.8 336 61-432 40-391 (397)
112 PLN02822 serine palmitoyltrans 100.0 4.9E-31 1.1E-35 258.8 28.8 339 61-432 107-475 (481)
113 TIGR01825 gly_Cac_T_rel pyrido 100.0 9.4E-31 2E-35 253.1 29.2 339 60-432 30-379 (385)
114 TIGR01822 2am3keto_CoA 2-amino 100.0 1.7E-30 3.7E-35 251.9 28.9 331 61-432 36-387 (393)
115 PLN02483 serine palmitoyltrans 100.0 4.6E-30 1E-34 252.4 30.1 336 62-432 99-464 (489)
116 PRK05958 8-amino-7-oxononanoat 100.0 7.7E-30 1.7E-34 246.9 30.5 338 61-432 37-385 (385)
117 PRK13392 5-aminolevulinate syn 100.0 5.7E-30 1.2E-34 249.0 27.0 336 63-432 46-395 (410)
118 PRK10534 L-threonine aldolase; 100.0 5.3E-30 1.1E-34 242.8 25.2 312 65-432 1-331 (333)
119 TIGR03392 FeS_syn_CsdA cystein 100.0 2.7E-29 5.8E-34 243.7 29.9 336 64-432 16-393 (398)
120 PRK10874 cysteine sulfinate de 100.0 4.8E-29 1E-33 242.2 29.9 336 64-432 19-396 (401)
121 KOG0258 Alanine aminotransfera 100.0 7.4E-29 1.6E-33 221.0 26.6 331 77-430 87-465 (475)
122 KOG0633 Histidinol phosphate a 100.0 1.5E-29 3.3E-34 213.8 20.0 323 62-431 40-374 (375)
123 cd06454 KBL_like KBL_like; thi 100.0 1E-28 2.2E-33 235.9 27.9 331 64-431 2-348 (349)
124 PRK02627 acetylornithine amino 100.0 2.8E-28 6.2E-33 236.6 27.3 340 57-432 33-392 (396)
125 cd00617 Tnase_like Tryptophana 100.0 1.1E-27 2.3E-32 229.8 28.4 331 61-432 9-406 (431)
126 TIGR00707 argD acetylornithine 100.0 5.1E-28 1.1E-32 233.5 25.9 337 59-432 23-379 (379)
127 PRK09064 5-aminolevulinate syn 100.0 1.3E-27 2.7E-32 232.6 28.4 337 62-432 45-395 (407)
128 PRK03244 argD acetylornithine 100.0 5.9E-28 1.3E-32 234.2 24.7 343 58-432 38-392 (398)
129 PRK09295 bifunctional cysteine 100.0 3E-27 6.5E-32 229.8 27.6 336 64-432 23-402 (406)
130 TIGR01821 5aminolev_synth 5-am 100.0 3.8E-27 8.3E-32 228.7 28.2 336 63-432 45-394 (402)
131 PLN02855 Bifunctional selenocy 100.0 2.9E-27 6.4E-32 231.0 27.3 338 63-432 31-416 (424)
132 PRK07179 hypothetical protein; 100.0 6.3E-27 1.4E-31 227.5 29.4 335 61-432 52-396 (407)
133 PLN02721 threonine aldolase 100.0 5.9E-27 1.3E-31 224.0 28.5 320 64-432 6-350 (353)
134 TIGR01979 sufS cysteine desulf 100.0 4.7E-27 1E-31 228.5 27.5 341 62-432 16-399 (403)
135 cd06502 TA_like Low-specificit 100.0 4.4E-27 9.6E-32 223.5 26.1 309 74-430 7-337 (338)
136 cd06451 AGAT_like Alanine-glyo 100.0 1.4E-26 3E-31 221.6 29.2 314 75-433 8-356 (356)
137 cd00378 SHMT Serine-glycine hy 100.0 1.4E-26 3E-31 225.2 29.3 333 64-432 20-383 (402)
138 COG1448 TyrB Aspartate/tyrosin 100.0 1.7E-26 3.7E-31 207.4 26.3 343 61-432 24-396 (396)
139 PRK02948 cysteine desulfurase; 100.0 6.8E-27 1.5E-31 225.6 25.2 335 66-432 2-372 (381)
140 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.5E-26 3.3E-31 221.7 27.4 280 107-432 53-366 (370)
141 PRK01278 argD acetylornithine 100.0 2E-26 4.3E-31 222.7 28.4 341 57-433 25-387 (389)
142 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.5E-26 7.5E-31 218.9 29.2 316 73-433 9-361 (361)
143 PF12897 Aminotran_MocR: Alani 100.0 8.6E-27 1.9E-31 209.6 22.3 307 98-432 61-413 (425)
144 TIGR03403 nifS_epsilon cystein 100.0 2.3E-26 5.1E-31 221.9 27.1 329 76-432 10-373 (382)
145 cd00610 OAT_like Acetyl ornith 100.0 2.1E-26 4.5E-31 225.0 27.0 344 59-432 32-413 (413)
146 COG0520 csdA Selenocysteine ly 100.0 8.3E-26 1.8E-30 215.3 30.0 341 62-432 20-403 (405)
147 PRK13393 5-aminolevulinate syn 100.0 7.9E-26 1.7E-30 219.6 29.8 336 63-432 45-394 (406)
148 TIGR01977 am_tr_V_EF2568 cyste 100.0 6.4E-26 1.4E-30 218.7 28.8 333 68-430 3-375 (376)
149 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.1E-25 2.4E-30 218.5 28.2 331 65-428 18-397 (397)
150 PRK05093 argD bifunctional N-s 99.9 9.6E-26 2.1E-30 218.6 26.7 341 57-432 34-398 (403)
151 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.8E-25 3.9E-30 213.9 27.7 319 75-432 8-355 (355)
152 PRK02936 argD acetylornithine 99.9 3.1E-25 6.7E-30 213.7 28.9 339 58-432 24-377 (377)
153 cd06453 SufS_like Cysteine des 99.9 7E-26 1.5E-30 218.1 24.4 321 76-428 10-373 (373)
154 PLN03227 serine palmitoyltrans 99.9 2.7E-25 5.8E-30 213.6 27.4 332 66-432 1-380 (392)
155 TIGR02326 transamin_PhnW 2-ami 99.9 2.5E-25 5.5E-30 213.3 27.2 296 107-433 37-361 (363)
156 cd00613 GDC-P Glycine cleavage 99.9 1E-25 2.2E-30 219.0 24.4 337 63-428 20-398 (398)
157 PLN02409 serine--glyoxylate am 99.9 2.7E-25 6E-30 214.9 26.4 325 75-432 18-370 (401)
158 PRK04073 rocD ornithine--oxo-a 99.9 3.2E-25 6.9E-30 214.5 25.8 347 52-433 29-396 (396)
159 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.4E-24 5.2E-29 207.6 28.7 324 64-432 19-379 (387)
160 PRK08088 4-aminobutyrate amino 99.9 3.9E-24 8.4E-29 208.3 28.5 352 54-432 32-421 (425)
161 TIGR03402 FeS_nifS cysteine de 99.9 2.3E-24 4.9E-29 207.9 26.6 325 76-432 10-370 (379)
162 PRK13479 2-aminoethylphosphona 99.9 1.4E-24 2.9E-29 208.7 24.7 319 75-432 14-361 (368)
163 PRK04260 acetylornithine amino 99.9 1E-23 2.2E-28 202.7 29.3 344 54-432 20-375 (375)
164 PRK07049 methionine gamma-lyas 99.9 6.8E-24 1.5E-28 205.3 27.4 224 98-361 77-314 (427)
165 PLN02242 methionine gamma-lyas 99.9 9.2E-24 2E-28 203.6 27.3 220 104-366 75-304 (418)
166 PRK00451 glycine dehydrogenase 99.9 7.9E-24 1.7E-28 208.3 26.1 337 64-432 69-446 (447)
167 TIGR00713 hemL glutamate-1-sem 99.9 6.4E-24 1.4E-28 207.4 24.5 350 52-433 37-421 (423)
168 PRK12381 bifunctional succinyl 99.9 1.9E-23 4.2E-28 202.4 26.9 344 54-432 30-397 (406)
169 cd06450 DOPA_deC_like DOPA dec 99.9 4.3E-24 9.3E-29 203.5 22.0 299 77-431 11-345 (345)
170 PRK00854 rocD ornithine--oxo-a 99.9 4.8E-23 1E-27 200.1 27.1 341 57-432 35-399 (401)
171 COG1104 NifS Cysteine sulfinat 99.9 3.8E-23 8.3E-28 189.7 24.3 336 66-432 3-375 (386)
172 TIGR02006 IscS cysteine desulf 99.9 3.6E-23 7.9E-28 200.7 25.2 335 66-432 5-375 (402)
173 COG0156 BioF 7-keto-8-aminopel 99.9 7.8E-23 1.7E-27 191.2 25.9 335 62-431 38-387 (388)
174 PRK00011 glyA serine hydroxyme 99.9 2.7E-22 5.9E-27 195.8 30.5 334 64-432 26-387 (416)
175 PTZ00125 ornithine aminotransf 99.9 4.5E-23 9.8E-28 200.3 24.8 341 58-432 26-393 (400)
176 PRK07505 hypothetical protein; 99.9 9.1E-23 2E-27 197.9 25.2 339 57-432 40-397 (402)
177 PLN00144 acetylornithine trans 99.9 9.1E-23 2E-27 195.5 23.9 338 58-432 10-378 (382)
178 PLN02955 8-amino-7-oxononanoat 99.9 3.7E-22 7.9E-27 190.9 27.5 333 63-432 102-459 (476)
179 PRK08247 cystathionine gamma-s 99.9 1.8E-22 3.9E-27 192.6 25.1 274 98-416 46-348 (366)
180 PRK13520 L-tyrosine decarboxyl 99.9 1.1E-21 2.3E-26 188.9 30.0 318 76-433 31-370 (371)
181 TIGR03235 DNA_S_dndA cysteine 99.9 6.9E-23 1.5E-27 195.7 21.4 318 76-424 9-348 (353)
182 PRK14012 cysteine desulfurase; 99.9 2.3E-22 5E-27 195.3 24.6 332 66-432 5-377 (404)
183 PRK06234 methionine gamma-lyas 99.9 9.6E-22 2.1E-26 189.4 27.9 213 103-359 62-284 (400)
184 PRK09792 4-aminobutyrate trans 99.9 4.8E-22 1E-26 192.8 25.9 357 51-433 28-420 (421)
185 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5E-21 1.1E-25 184.5 31.1 286 108-431 62-373 (373)
186 TIGR03246 arg_catab_astC succi 99.9 1.3E-21 2.8E-26 189.1 26.5 345 53-432 25-393 (397)
187 PLN02651 cysteine desulfurase 99.9 8.1E-22 1.8E-26 188.9 24.1 315 76-422 10-364 (364)
188 PRK06460 hypothetical protein; 99.9 3.8E-21 8.2E-26 183.8 28.2 212 104-359 44-261 (376)
189 TIGR02080 O_succ_thio_ly O-suc 99.9 3.4E-21 7.3E-26 184.2 27.6 221 98-359 45-268 (382)
190 PRK07582 cystathionine gamma-l 99.9 5E-21 1.1E-25 182.4 28.5 282 98-428 45-363 (366)
191 TIGR01437 selA_rel uncharacter 99.9 3.8E-21 8.1E-26 183.2 27.5 298 76-432 24-363 (363)
192 PRK08133 O-succinylhomoserine 99.9 6.6E-21 1.4E-25 183.0 28.6 213 105-361 61-280 (390)
193 PRK06767 methionine gamma-lyas 99.9 4.3E-21 9.3E-26 184.4 27.2 262 98-401 55-333 (386)
194 TIGR00700 GABAtrnsam 4-aminobu 99.9 8.2E-21 1.8E-25 184.6 29.2 356 52-433 22-419 (420)
195 PRK05937 8-amino-7-oxononanoat 99.9 4.6E-21 1E-25 183.8 26.0 324 63-432 4-348 (370)
196 PRK06918 4-aminobutyrate amino 99.9 7E-21 1.5E-25 186.5 27.2 355 51-432 42-441 (451)
197 PLN02624 ornithine-delta-amino 99.9 3.2E-21 7E-26 189.4 24.3 347 54-432 66-442 (474)
198 PRK06777 4-aminobutyrate amino 99.9 1.3E-20 2.8E-25 182.8 28.3 353 53-433 30-420 (421)
199 PRK08045 cystathionine gamma-s 99.9 1.7E-20 3.7E-25 179.4 28.5 222 98-359 46-269 (386)
200 cd00614 CGS_like CGS_like: Cys 99.9 1.1E-20 2.4E-25 180.8 26.8 282 103-432 38-368 (369)
201 TIGR01885 Orn_aminotrans ornit 99.9 7.1E-21 1.5E-25 184.6 24.8 343 59-433 33-401 (401)
202 PRK08776 cystathionine gamma-s 99.9 2.7E-20 5.9E-25 179.0 27.6 221 98-359 54-277 (405)
203 PRK04366 glycine dehydrogenase 99.9 2.9E-20 6.4E-25 183.1 27.5 334 68-432 73-446 (481)
204 PRK07504 O-succinylhomoserine 99.9 3.4E-20 7.3E-25 178.4 27.2 252 64-361 30-285 (398)
205 PRK04612 argD acetylornithine 99.9 3.6E-20 7.7E-25 178.6 26.7 346 53-432 30-401 (408)
206 PRK07495 4-aminobutyrate amino 99.9 2.9E-20 6.2E-25 180.2 25.5 352 52-432 29-419 (425)
207 COG4992 ArgD Ornithine/acetylo 99.9 1.1E-20 2.3E-25 173.3 21.0 349 51-432 30-396 (404)
208 PRK08360 4-aminobutyrate amino 99.9 1.4E-19 3E-24 176.2 30.0 349 52-432 30-424 (443)
209 PRK08249 cystathionine gamma-s 99.9 5.9E-20 1.3E-24 176.5 26.8 213 103-359 62-280 (398)
210 PRK08861 cystathionine gamma-s 99.9 1E-19 2.2E-24 173.6 27.4 221 98-359 47-270 (388)
211 PF00266 Aminotran_5: Aminotra 99.9 2.5E-20 5.5E-25 179.2 23.1 323 76-424 10-371 (371)
212 PRK07810 O-succinylhomoserine 99.9 7.7E-20 1.7E-24 176.0 26.1 221 98-362 64-291 (403)
213 PRK00062 glutamate-1-semialdeh 99.9 3.7E-20 8E-25 180.2 24.2 347 54-432 41-422 (426)
214 PRK09028 cystathionine beta-ly 99.9 2E-19 4.4E-24 171.3 28.2 246 66-359 27-277 (394)
215 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.3E-19 2.8E-24 173.8 26.9 216 99-359 49-270 (380)
216 TIGR01814 kynureninase kynuren 99.9 2.3E-19 5E-24 174.4 28.0 329 63-433 26-406 (406)
217 PRK07811 cystathionine gamma-s 99.9 3E-19 6.5E-24 171.5 28.0 219 103-361 59-281 (388)
218 PRK07503 methionine gamma-lyas 99.9 2E-19 4.3E-24 173.4 26.7 216 99-359 60-283 (403)
219 PRK07050 cystathionine beta-ly 99.9 2.3E-19 4.9E-24 172.3 26.6 218 97-359 58-282 (394)
220 PRK08117 4-aminobutyrate amino 99.8 1.4E-18 3E-23 169.9 30.1 352 53-432 33-427 (433)
221 TIGR02379 ECA_wecE TDP-4-keto- 99.8 9.1E-19 2E-23 167.3 27.8 301 78-432 10-375 (376)
222 TIGR01328 met_gam_lyase methio 99.8 7.8E-19 1.7E-23 168.6 26.9 220 98-359 53-277 (391)
223 COG0075 Serine-pyruvate aminot 99.8 2.3E-18 4.9E-23 159.7 28.5 323 75-432 14-361 (383)
224 PRK07269 cystathionine gamma-s 99.8 5.8E-19 1.3E-23 167.6 25.1 290 98-432 48-362 (364)
225 TIGR02407 ectoine_ectB diamino 99.8 6.1E-19 1.3E-23 170.7 25.2 354 52-433 24-411 (412)
226 PRK08574 cystathionine gamma-s 99.8 1.6E-18 3.6E-23 165.9 27.1 214 104-359 52-269 (385)
227 TIGR01329 cysta_beta_ly_E cyst 99.8 2E-18 4.3E-23 165.2 27.3 266 107-416 49-359 (378)
228 PRK05968 hypothetical protein; 99.8 2.2E-18 4.7E-23 165.6 27.4 265 106-416 64-370 (389)
229 PRK06058 4-aminobutyrate amino 99.8 1.6E-18 3.5E-23 169.4 26.8 354 51-433 44-441 (443)
230 PRK08064 cystathionine beta-ly 99.8 3.1E-18 6.8E-23 164.6 27.9 280 105-431 54-383 (390)
231 PLN02724 Molybdenum cofactor s 99.8 2.7E-18 5.8E-23 178.9 27.9 342 65-432 35-486 (805)
232 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 5.9E-18 1.3E-22 164.2 28.1 165 98-294 51-220 (418)
233 TIGR01324 cysta_beta_ly_B cyst 99.8 7.6E-18 1.7E-22 160.6 27.5 214 99-359 42-266 (377)
234 PLN02509 cystathionine beta-ly 99.8 7.2E-18 1.6E-22 163.5 27.5 220 99-359 125-349 (464)
235 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.1E-17 2.3E-22 160.7 28.4 305 79-432 11-374 (375)
236 PRK07671 cystathionine beta-ly 99.8 1.1E-17 2.4E-22 159.9 27.9 216 104-359 49-266 (377)
237 PRK09264 diaminobutyrate--2-ox 99.8 2.3E-18 4.9E-23 167.6 23.0 354 52-432 28-414 (425)
238 PRK05964 adenosylmethionine--8 99.8 2.9E-18 6.3E-23 167.0 23.1 352 51-433 30-421 (423)
239 TIGR01364 serC_1 phosphoserine 99.8 1.3E-17 2.8E-22 157.6 26.8 320 76-433 2-347 (349)
240 cd00615 Orn_deC_like Ornithine 99.8 6.4E-19 1.4E-23 163.5 17.5 165 103-294 57-236 (294)
241 PRK13034 serine hydroxymethylt 99.8 1.4E-17 3E-22 161.5 27.3 335 64-432 29-390 (416)
242 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.9E-17 4.1E-22 158.3 27.9 277 104-429 17-352 (352)
243 cd00611 PSAT_like Phosphoserin 99.8 6E-18 1.3E-22 161.1 23.8 317 74-432 7-354 (355)
244 COG0160 GabT 4-aminobutyrate a 99.8 1.8E-17 3.9E-22 156.9 26.5 354 51-433 44-444 (447)
245 KOG1549 Cysteine desulfurase N 99.8 1.1E-17 2.4E-22 154.5 24.1 205 61-293 40-257 (428)
246 PRK08248 O-acetylhomoserine am 99.8 1.5E-17 3.3E-22 161.0 26.4 158 104-292 63-225 (431)
247 TIGR00709 dat 2,4-diaminobutyr 99.8 1.1E-17 2.4E-22 163.2 25.1 352 52-432 28-433 (442)
248 PRK05939 hypothetical protein; 99.8 3.5E-17 7.6E-22 157.1 28.0 222 100-359 40-284 (397)
249 PRK13580 serine hydroxymethylt 99.8 2E-17 4.3E-22 158.7 25.7 343 64-432 50-443 (493)
250 PRK11658 UDP-4-amino-4-deoxy-L 99.8 4.1E-17 8.9E-22 156.7 27.8 304 78-432 13-377 (379)
251 TIGR03372 putres_am_tran putre 99.8 3.3E-17 7.2E-22 158.7 26.8 346 57-432 69-442 (442)
252 KOG1411 Aspartate aminotransfe 99.8 7.9E-19 1.7E-23 154.9 13.8 323 59-397 48-397 (427)
253 PF04864 Alliinase_C: Allinase 99.8 2E-18 4.3E-23 154.0 16.2 288 105-431 43-362 (363)
254 PRK03715 argD acetylornithine 99.8 4.7E-17 1E-21 156.6 27.1 337 57-432 30-391 (395)
255 PTZ00094 serine hydroxymethylt 99.8 4.6E-17 1E-21 159.8 27.4 343 64-432 35-406 (452)
256 PRK06541 hypothetical protein; 99.8 3E-17 6.5E-22 160.5 25.9 354 51-432 40-453 (460)
257 PRK06176 cystathionine gamma-s 99.8 5.8E-17 1.3E-21 155.0 27.0 221 98-359 44-266 (380)
258 PRK11522 putrescine--2-oxoglut 99.8 2.5E-17 5.3E-22 160.7 24.4 348 55-432 74-449 (459)
259 PRK06084 O-acetylhomoserine am 99.8 6.6E-17 1.4E-21 156.5 25.7 160 105-292 58-219 (425)
260 COG2008 GLY1 Threonine aldolas 99.8 5.6E-17 1.2E-21 146.1 23.0 317 66-432 2-341 (342)
261 PRK05967 cystathionine beta-ly 99.8 1.9E-16 4.2E-21 150.6 26.5 219 99-359 56-280 (395)
262 PRK03080 phosphoserine aminotr 99.8 5.2E-17 1.1E-21 155.9 22.6 323 66-432 14-371 (378)
263 KOG1359 Glycine C-acetyltransf 99.8 4.1E-17 8.9E-22 141.1 19.4 326 62-432 66-410 (417)
264 PRK08593 4-aminobutyrate amino 99.8 2.6E-16 5.6E-21 153.6 27.1 351 52-432 31-427 (445)
265 PRK06702 O-acetylhomoserine am 99.8 3.5E-16 7.5E-21 150.4 26.8 219 105-359 61-310 (432)
266 COG0001 HemL Glutamate-1-semia 99.8 8.3E-17 1.8E-21 149.5 20.9 350 50-432 40-426 (432)
267 PRK05355 3-phosphoserine/phosp 99.8 3.6E-16 7.9E-21 148.5 25.7 320 75-432 12-356 (360)
268 TIGR03588 PseC UDP-4-keto-6-de 99.8 2E-15 4.4E-20 145.5 29.6 303 78-432 9-380 (380)
269 KOG1412 Aspartate aminotransfe 99.7 1.5E-16 3.3E-21 138.6 18.9 317 62-398 29-378 (410)
270 PRK07678 aminotransferase; Val 99.7 2.1E-15 4.5E-20 147.5 27.1 354 52-432 36-447 (451)
271 PRK04013 argD acetylornithine/ 99.7 2.6E-15 5.7E-20 142.1 26.6 331 57-432 18-358 (364)
272 TIGR03531 selenium_SpcS O-phos 99.7 1.9E-15 4.1E-20 145.1 25.8 296 108-432 104-444 (444)
273 PRK05769 4-aminobutyrate amino 99.7 7.2E-15 1.6E-19 143.3 30.3 349 52-432 43-437 (441)
274 PRK06943 adenosylmethionine--8 99.7 1.3E-15 2.7E-20 148.8 24.6 349 52-432 43-444 (453)
275 PRK06173 adenosylmethionine--8 99.7 1.2E-15 2.5E-20 148.0 24.0 350 52-432 33-423 (429)
276 PRK05639 4-aminobutyrate amino 99.7 6.1E-15 1.3E-19 144.0 28.7 351 52-432 42-441 (457)
277 cd01494 AAT_I Aspartate aminot 99.7 2E-16 4.4E-21 134.4 16.1 160 108-292 3-170 (170)
278 PRK05965 hypothetical protein; 99.7 2E-15 4.3E-20 147.8 24.6 351 52-432 35-445 (459)
279 PRK07986 adenosylmethionine--8 99.7 2.1E-15 4.6E-20 146.0 24.4 349 53-433 33-422 (428)
280 PRK05994 O-acetylhomoserine am 99.7 6E-15 1.3E-19 143.2 27.5 155 106-291 64-223 (427)
281 PLN02482 glutamate-1-semialdeh 99.7 4.7E-15 1E-19 144.9 25.8 345 53-433 89-472 (474)
282 PRK08134 O-acetylhomoserine am 99.7 9E-15 1.9E-19 141.7 27.5 159 105-291 64-224 (433)
283 PRK07482 hypothetical protein; 99.7 1.2E-14 2.6E-19 142.5 28.6 353 51-432 38-452 (461)
284 PRK09221 beta alanine--pyruvat 99.7 2.7E-15 6E-20 146.3 23.6 349 52-432 38-441 (445)
285 PLN02414 glycine dehydrogenase 99.7 3.4E-15 7.3E-20 155.1 25.1 337 63-432 525-905 (993)
286 PRK13360 omega amino acid--pyr 99.7 4.3E-15 9.3E-20 144.8 24.6 349 53-432 36-438 (442)
287 PLN03226 serine hydroxymethylt 99.7 1.3E-14 2.9E-19 141.9 27.9 349 64-432 35-417 (475)
288 KOG1368 Threonine aldolase [Am 99.7 3.6E-15 7.8E-20 129.5 20.6 320 65-430 23-364 (384)
289 PLN02271 serine hydroxymethylt 99.7 1.6E-14 3.4E-19 139.4 27.0 345 64-432 149-538 (586)
290 PRK12389 glutamate-1-semialdeh 99.7 9.7E-15 2.1E-19 142.2 26.0 345 52-433 42-426 (428)
291 PRK06082 4-aminobutyrate amino 99.7 1.4E-14 3.1E-19 141.7 27.0 347 54-432 63-449 (459)
292 KOG1360 5-aminolevulinate synt 99.7 6.2E-15 1.4E-19 132.8 22.1 337 63-432 171-522 (570)
293 PRK06105 aminotransferase; Pro 99.7 2E-14 4.3E-19 140.9 27.9 350 52-432 37-447 (460)
294 COG0112 GlyA Glycine/serine hy 99.7 1.7E-14 3.7E-19 130.9 24.9 338 64-432 27-388 (413)
295 PRK06062 hypothetical protein; 99.7 1.3E-14 2.9E-19 141.7 26.4 348 52-432 42-443 (451)
296 PRK08742 adenosylmethionine--8 99.7 1.2E-14 2.6E-19 142.2 26.1 350 51-432 52-465 (472)
297 PRK15407 lipopolysaccharide bi 99.7 4.1E-14 8.9E-19 137.6 29.6 191 65-296 25-238 (438)
298 PRK05630 adenosylmethionine--8 99.7 9E-15 1.9E-19 141.7 24.8 350 52-433 29-419 (422)
299 PRK07812 O-acetylhomoserine am 99.7 2.1E-14 4.5E-19 139.1 27.2 221 105-359 69-317 (436)
300 PRK00615 glutamate-1-semialdeh 99.7 8.7E-15 1.9E-19 141.8 24.6 348 51-432 41-426 (433)
301 PRK06916 adenosylmethionine--8 99.7 8.7E-15 1.9E-19 143.4 24.4 349 52-432 45-453 (460)
302 PRK07481 hypothetical protein; 99.7 4E-14 8.7E-19 138.4 28.8 350 52-432 31-443 (449)
303 PRK07030 adenosylmethionine--8 99.7 1.2E-14 2.6E-19 142.3 25.1 350 51-432 35-444 (466)
304 TIGR00508 bioA adenosylmethion 99.7 1E-14 2.2E-19 141.7 24.4 346 57-433 39-425 (427)
305 PRK07483 hypothetical protein; 99.7 4.1E-14 8.8E-19 138.0 28.6 352 56-432 23-435 (443)
306 PRK06917 hypothetical protein; 99.7 3.9E-14 8.5E-19 138.2 28.2 357 51-432 19-435 (447)
307 PLN02760 4-aminobutyrate:pyruv 99.7 2.2E-14 4.8E-19 141.4 26.5 346 56-432 82-489 (504)
308 PRK15029 arginine decarboxylas 99.7 6.4E-15 1.4E-19 149.0 23.1 182 99-294 198-402 (755)
309 PRK02769 histidine decarboxyla 99.7 4.2E-14 9.2E-19 134.7 27.0 291 106-432 62-370 (380)
310 TIGR01366 serC_3 phosphoserine 99.7 1.6E-14 3.4E-19 137.6 23.7 317 75-433 12-359 (361)
311 PRK07480 putative aminotransfe 99.7 3E-14 6.5E-19 139.3 26.1 350 52-432 39-446 (456)
312 PRK08114 cystathionine beta-ly 99.7 5.7E-14 1.2E-18 133.6 27.1 214 105-359 62-280 (395)
313 PRK06931 diaminobutyrate--2-ox 99.7 4.9E-14 1.1E-18 137.9 25.9 351 52-432 47-452 (459)
314 PRK12403 putative aminotransfe 99.7 3.4E-14 7.3E-19 139.2 24.6 350 51-432 42-450 (460)
315 PRK07036 hypothetical protein; 99.7 2.7E-13 5.8E-18 133.0 30.9 350 52-432 40-450 (466)
316 PRK07046 aminotransferase; Val 99.7 9.6E-14 2.1E-18 135.5 27.5 340 52-432 64-448 (453)
317 TIGR00699 GABAtrns_euk 4-amino 99.7 1.6E-14 3.5E-19 140.2 21.7 351 51-432 46-464 (464)
318 COG0626 MetC Cystathionine bet 99.7 1.7E-13 3.7E-18 128.4 27.3 216 104-359 62-282 (396)
319 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 3E-16 6.4E-21 148.1 8.6 224 100-356 60-314 (417)
320 TIGR02618 tyr_phenol_ly tyrosi 99.6 2.4E-13 5.1E-18 129.0 28.2 298 100-432 66-424 (450)
321 TIGR01788 Glu-decarb-GAD gluta 99.6 1.2E-13 2.5E-18 133.5 26.4 331 76-432 52-427 (431)
322 PRK06434 cystathionine gamma-l 99.6 2.9E-13 6.4E-18 128.9 28.6 229 104-378 63-309 (384)
323 PRK06938 diaminobutyrate--2-ox 99.6 1.4E-13 2.9E-18 134.9 26.9 351 52-432 52-458 (464)
324 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 3.5E-14 7.5E-19 134.8 21.9 212 107-359 57-274 (386)
325 KOG1402 Ornithine aminotransfe 99.6 1.4E-14 3E-19 127.6 16.2 339 59-432 55-425 (427)
326 PRK06148 hypothetical protein; 99.6 1.6E-13 3.6E-18 146.0 27.5 342 60-432 621-1008(1013)
327 PRK06149 hypothetical protein; 99.6 3E-13 6.4E-18 144.0 29.3 343 60-433 582-969 (972)
328 KOG1404 Alanine-glyoxylate ami 99.6 1.8E-13 4E-18 123.5 23.0 349 53-428 40-432 (442)
329 PLN03032 serine decarboxylase; 99.6 3.6E-13 7.8E-18 127.4 26.1 318 77-431 35-373 (374)
330 PRK04311 selenocysteine syntha 99.6 3.3E-13 7.2E-18 131.1 26.2 312 76-432 97-462 (464)
331 PF00464 SHMT: Serine hydroxym 99.6 6.2E-14 1.3E-18 131.9 20.0 343 65-427 22-398 (399)
332 PRK05613 O-acetylhomoserine am 99.6 3.9E-13 8.4E-18 130.3 25.7 218 105-359 69-322 (437)
333 PLN02452 phosphoserine transam 99.6 1.3E-12 2.8E-17 123.6 28.3 333 64-432 7-361 (365)
334 PRK13237 tyrosine phenol-lyase 99.6 1.3E-12 2.9E-17 124.3 28.2 298 99-432 72-431 (460)
335 COG0399 WecE Predicted pyridox 99.6 2.6E-12 5.7E-17 119.8 28.4 304 78-433 14-372 (374)
336 PRK13578 ornithine decarboxyla 99.6 4.9E-13 1.1E-17 134.1 25.2 186 99-296 167-373 (720)
337 PRK15400 lysine decarboxylase 99.6 1.3E-13 2.8E-18 138.2 20.9 304 100-431 189-556 (714)
338 COG0161 BioA Adenosylmethionin 99.6 3E-13 6.5E-18 127.6 21.3 354 52-433 33-442 (449)
339 PRK08297 L-lysine aminotransfe 99.6 1.6E-12 3.5E-17 126.8 25.9 349 53-432 34-439 (443)
340 KOG2862 Alanine-glyoxylate ami 99.6 1.9E-12 4.2E-17 113.4 22.6 282 127-432 69-380 (385)
341 PRK05367 glycine dehydrogenase 99.6 3.8E-12 8.3E-17 133.2 28.5 319 67-429 80-437 (954)
342 COG1103 Archaea-specific pyrid 99.6 1.9E-12 4.1E-17 111.3 21.4 279 106-433 62-379 (382)
343 PLN02414 glycine dehydrogenase 99.6 2.2E-12 4.7E-17 134.4 26.5 320 67-429 107-464 (993)
344 KOG1357 Serine palmitoyltransf 99.5 8.5E-14 1.9E-18 127.7 13.3 333 64-431 137-499 (519)
345 PRK15399 lysine decarboxylase 99.5 1.8E-12 4E-17 129.9 23.8 296 103-431 192-556 (713)
346 PF01041 DegT_DnrJ_EryC1: DegT 99.5 2.3E-12 4.9E-17 123.3 23.2 298 79-429 5-363 (363)
347 KOG0053 Cystathionine beta-lya 99.5 6.2E-12 1.4E-16 116.5 24.9 214 105-359 77-294 (409)
348 TIGR01365 serC_2 phosphoserine 99.5 1.8E-12 4E-17 122.6 21.8 292 106-429 36-368 (374)
349 KOG1358 Serine palmitoyltransf 99.5 1.4E-12 3E-17 117.7 19.0 339 61-432 92-463 (467)
350 PLN02880 tyrosine decarboxylas 99.5 5.8E-12 1.3E-16 124.1 25.1 310 98-432 111-482 (490)
351 PRK12462 phosphoserine aminotr 99.5 2.9E-11 6.3E-16 113.2 28.2 331 65-432 5-360 (364)
352 TIGR00474 selA seryl-tRNA(sec) 99.5 6.4E-12 1.4E-16 121.9 24.4 312 76-428 92-453 (454)
353 TIGR03251 LAT_fam L-lysine 6-t 99.5 3.1E-11 6.7E-16 117.8 29.0 351 51-431 25-431 (431)
354 PRK06209 glutamate-1-semialdeh 99.5 2.7E-12 5.8E-17 125.1 19.7 343 52-432 37-403 (431)
355 KOG1401 Acetylornithine aminot 99.5 1.9E-11 4.2E-16 111.4 21.9 298 59-376 52-370 (433)
356 PF01212 Beta_elim_lyase: Beta 99.5 6.1E-14 1.3E-18 128.2 5.3 256 77-370 7-281 (290)
357 COG1982 LdcC Arginine/lysine/o 99.5 1.9E-11 4.2E-16 117.8 22.5 230 107-366 72-320 (557)
358 PLN02974 adenosylmethionine-8- 99.4 3.6E-11 7.9E-16 123.8 25.4 207 205-433 584-817 (817)
359 PLN02590 probable tyrosine dec 99.4 1.6E-10 3.5E-15 114.0 27.8 316 97-431 158-529 (539)
360 PF00202 Aminotran_3: Aminotra 99.4 4.7E-13 1E-17 126.3 9.3 277 59-358 12-315 (339)
361 COG2873 MET17 O-acetylhomoseri 99.4 4.3E-11 9.3E-16 107.9 19.0 160 104-295 61-226 (426)
362 TIGR00461 gcvP glycine dehydro 99.4 3.2E-10 6.9E-15 117.1 27.9 309 98-431 516-864 (939)
363 PRK05367 glycine dehydrogenase 99.4 3.1E-10 6.7E-15 119.1 28.1 337 63-432 499-873 (954)
364 TIGR03799 NOD_PanD_pyr putativ 99.4 3.3E-10 7.1E-15 112.0 25.8 314 97-427 117-518 (522)
365 PLN02263 serine decarboxylase 99.3 2.7E-09 5.9E-14 102.8 29.2 315 79-431 105-440 (470)
366 PRK12566 glycine dehydrogenase 99.3 1.7E-10 3.7E-15 118.3 22.1 306 99-432 530-874 (954)
367 COG3844 Kynureninase [Amino ac 99.3 3.3E-09 7.1E-14 94.1 24.4 330 63-433 30-401 (407)
368 COG0076 GadB Glutamate decarbo 99.2 1.4E-09 3.1E-14 105.6 20.7 277 76-378 73-381 (460)
369 TIGR00461 gcvP glycine dehydro 99.2 8.6E-09 1.9E-13 106.7 26.9 317 67-429 68-426 (939)
370 PLN02994 1-aminocyclopropane-1 99.2 3.4E-11 7.3E-16 98.8 7.2 62 100-161 87-153 (153)
371 PF06838 Met_gamma_lyase: Meth 99.2 5.8E-10 1.3E-14 101.0 14.1 270 79-378 27-319 (403)
372 PF02347 GDC-P: Glycine cleava 99.1 1E-08 2.3E-13 97.2 21.0 317 68-428 70-429 (429)
373 TIGR02617 tnaA_trp_ase tryptop 99.1 1E-07 2.3E-12 90.1 26.1 324 63-432 41-439 (467)
374 KOG2467 Glycine/serine hydroxy 99.1 5.1E-08 1.1E-12 87.9 22.2 345 66-431 43-423 (477)
375 PF00282 Pyridoxal_deC: Pyrido 99.0 2.9E-08 6.2E-13 94.7 17.9 260 98-376 68-372 (373)
376 COG0403 GcvP Glycine cleavage 98.9 1.4E-06 3E-11 80.8 25.5 328 67-431 79-447 (450)
377 COG1003 GcvP Glycine cleavage 98.8 8E-07 1.7E-11 82.4 20.7 341 63-432 66-445 (496)
378 COG4100 Cystathionine beta-lya 98.8 4.8E-07 1E-11 79.6 16.4 203 79-296 38-253 (416)
379 COG1921 SelA Selenocysteine sy 98.7 6.3E-07 1.4E-11 83.3 16.9 218 76-331 38-267 (395)
380 COG1725 Predicted transcriptio 98.7 2.4E-09 5.3E-14 82.9 -0.8 47 2-48 18-68 (125)
381 KOG1403 Predicted alanine-glyo 98.6 2.7E-06 5.9E-11 75.0 16.8 198 215-432 219-435 (452)
382 PRK12566 glycine dehydrogenase 98.6 5E-05 1.1E-09 78.9 26.6 315 66-429 82-439 (954)
383 COG1932 SerC Phosphoserine ami 98.5 3.3E-05 7.1E-10 70.7 20.7 329 65-432 6-361 (365)
384 COG3033 TnaA Tryptophanase [Am 98.4 0.00019 4.2E-09 65.2 22.7 329 65-432 48-442 (471)
385 KOG1383 Glutamate decarboxylas 98.4 6.2E-05 1.3E-09 70.7 20.1 294 78-398 93-412 (491)
386 TIGR03811 tyr_de_CO2_Ent tyros 98.4 0.00012 2.7E-09 73.6 23.3 269 77-359 95-475 (608)
387 PF05889 SLA_LP_auto_ag: Solub 98.4 3.5E-05 7.6E-10 71.8 17.5 279 126-433 74-389 (389)
388 PF03841 SelA: L-seryl-tRNA se 98.3 7.5E-07 1.6E-11 82.1 5.9 253 76-359 17-296 (367)
389 KOG1405 4-aminobutyrate aminot 98.1 0.00017 3.8E-09 65.3 16.0 200 206-433 271-482 (484)
390 PF00392 GntR: Bacterial regul 98.1 4.8E-07 1E-11 62.8 -0.3 37 2-38 7-43 (64)
391 COG2186 FadR Transcriptional r 98.0 2.1E-06 4.6E-11 76.8 0.7 47 2-48 17-67 (241)
392 COG2188 PhnF Transcriptional r 97.9 1E-06 2.2E-11 78.6 -2.4 47 2-48 14-64 (236)
393 KOG3846 L-kynurenine hydrolase 97.9 0.0019 4.1E-08 57.7 17.6 336 61-432 64-459 (465)
394 PRK14999 histidine utilization 97.9 1.1E-06 2.4E-11 79.0 -2.5 49 2-50 19-71 (241)
395 TIGR02325 C_P_lyase_phnF phosp 97.9 1.1E-06 2.4E-11 78.9 -2.6 49 2-50 15-67 (238)
396 TIGR02404 trehalos_R_Bsub treh 97.8 1.4E-06 3.1E-11 77.9 -2.4 49 2-50 7-59 (233)
397 TIGR02018 his_ut_repres histid 97.8 1.6E-06 3.5E-11 77.4 -2.6 49 2-50 8-60 (230)
398 PRK09764 DNA-binding transcrip 97.8 2E-06 4.4E-11 77.2 -2.2 49 2-50 12-64 (240)
399 PRK11402 DNA-binding transcrip 97.8 2E-06 4.4E-11 77.3 -2.3 47 2-48 16-66 (241)
400 PRK04984 fatty acid metabolism 97.8 6.4E-06 1.4E-10 74.0 0.4 47 2-48 14-64 (239)
401 PRK09990 DNA-binding transcrip 97.7 1E-05 2.2E-10 73.3 0.4 47 2-48 14-64 (251)
402 TIGR02812 fadR_gamma fatty aci 97.7 1E-05 2.3E-10 72.5 0.4 36 2-37 13-48 (235)
403 KOG0628 Aromatic-L-amino-acid/ 97.7 0.0067 1.5E-07 57.3 18.4 308 99-431 103-468 (511)
404 KOG2040 Glycine dehydrogenase 97.6 0.009 2E-07 58.8 19.2 319 68-429 123-478 (1001)
405 PRK11523 DNA-binding transcrip 97.6 1.4E-05 3.1E-10 72.4 0.5 48 2-49 15-66 (253)
406 PRK09464 pdhR transcriptional 97.6 1.5E-05 3.2E-10 72.4 0.5 47 2-48 17-67 (254)
407 KOG0629 Glutamate decarboxylas 97.6 0.0058 1.3E-07 57.2 17.0 311 96-431 128-506 (510)
408 PRK10079 phosphonate metabolis 97.6 5.9E-06 1.3E-10 74.3 -2.7 48 2-50 19-70 (241)
409 PRK10421 DNA-binding transcrip 97.6 1.8E-05 3.8E-10 71.8 0.4 37 2-38 9-45 (253)
410 PRK03837 transcriptional regul 97.6 2E-05 4.4E-10 70.9 0.5 36 2-37 20-55 (241)
411 PRK10225 DNA-binding transcrip 97.6 2E-05 4.3E-10 71.7 0.3 48 2-49 16-67 (257)
412 TIGR03337 phnR transcriptional 97.2 7.7E-05 1.7E-09 66.7 -0.5 39 2-40 8-46 (231)
413 PRK11414 colanic acid/biofilm 97.1 0.00015 3.2E-09 64.4 0.6 36 2-38 18-53 (221)
414 KOG2790 Phosphoserine aminotra 97.1 0.11 2.4E-06 46.3 17.8 329 64-432 7-366 (370)
415 PLN02672 methionine S-methyltr 96.9 0.013 2.7E-07 62.9 13.0 226 82-324 407-640 (1082)
416 PRK11534 DNA-binding transcrip 96.9 0.00031 6.8E-09 62.4 0.5 35 2-37 14-48 (224)
417 smart00345 HTH_GNTR helix_turn 96.7 0.00028 6E-09 48.0 -0.6 36 3-38 4-39 (60)
418 TIGR03338 phnR_burk phosphonat 96.6 0.00054 1.2E-08 60.3 0.2 35 2-37 18-52 (212)
419 KOG2040 Glycine dehydrogenase 96.3 0.33 7.2E-06 48.3 16.7 300 104-431 577-915 (1001)
420 KOG3843 Predicted serine hydro 96.1 0.077 1.7E-06 46.7 10.6 127 223-360 172-301 (432)
421 PF14502 HTH_41: Helix-turn-he 95.9 0.0023 5E-08 40.2 0.1 27 14-40 1-27 (48)
422 COG1802 GntR Transcriptional r 95.4 0.0055 1.2E-07 54.6 0.9 35 2-37 23-57 (230)
423 cd07377 WHTH_GntR Winged helix 91.5 0.057 1.2E-06 37.1 0.1 36 3-38 9-44 (66)
424 COG1737 RpiR Transcriptional r 87.7 8.4 0.00018 35.4 11.3 164 19-242 36-208 (281)
425 PF02796 HTH_7: Helix-turn-hel 84.5 0.25 5.5E-06 31.1 -0.3 20 21-40 23-42 (45)
426 PF13730 HTH_36: Helix-turn-he 81.4 0.45 9.8E-06 31.4 -0.1 24 16-39 22-45 (55)
427 PRK12423 LexA repressor; Provi 80.6 0.35 7.6E-06 42.0 -1.1 40 4-48 15-59 (202)
428 TIGR01470 cysG_Nterm siroheme 80.4 23 0.00049 30.8 10.2 96 124-246 7-103 (205)
429 PRK10014 DNA-binding transcrip 79.8 15 0.00033 34.5 9.8 35 17-51 4-39 (342)
430 PF13936 HTH_38: Helix-turn-he 78.8 0.75 1.6E-05 28.8 0.3 20 20-39 21-40 (44)
431 PRK11014 transcriptional repre 77.5 0.71 1.5E-05 37.5 -0.1 34 2-36 9-42 (141)
432 PF01726 LexA_DNA_bind: LexA D 76.9 0.55 1.2E-05 32.3 -0.7 20 19-38 25-45 (65)
433 COG0296 GlgB 1,4-alpha-glucan 74.7 4.6 0.0001 41.1 4.7 40 213-255 205-244 (628)
434 PF13384 HTH_23: Homeodomain-l 73.1 1.3 2.9E-05 28.3 0.4 18 21-38 19-36 (50)
435 COG1609 PurR Transcriptional r 69.5 57 0.0012 30.7 10.7 72 20-91 1-86 (333)
436 TIGR01321 TrpR trp operon repr 68.9 2.5 5.4E-05 31.3 1.0 17 21-37 57-73 (94)
437 PRK09492 treR trehalose repres 67.7 88 0.0019 28.8 11.6 31 18-48 3-34 (315)
438 PRK01381 Trp operon repressor; 67.6 3 6.5E-05 31.1 1.2 17 21-37 57-73 (99)
439 PRK09526 lacI lac repressor; R 65.1 91 0.002 29.1 11.3 74 18-91 4-91 (342)
440 PRK14987 gluconate operon tran 60.7 68 0.0015 29.9 9.5 32 18-49 4-36 (331)
441 COG1377 FlhB Flagellar biosynt 59.4 8 0.00017 36.4 2.7 44 204-248 261-319 (363)
442 PRK10703 DNA-binding transcrip 59.3 55 0.0012 30.7 8.6 22 20-41 2-23 (341)
443 PF13309 HTH_22: HTH domain 59.3 3.8 8.2E-05 28.0 0.4 20 21-40 44-63 (64)
444 TIGR02405 trehalos_R_Ecol treh 58.6 66 0.0014 29.7 8.9 21 20-40 2-22 (311)
445 PRK13109 flhB flagellar biosyn 55.6 7.7 0.00017 36.9 2.0 25 224-248 297-321 (358)
446 PRK11557 putative DNA-binding 55.6 1.6E+02 0.0035 26.7 13.6 20 19-38 30-49 (278)
447 PRK11337 DNA-binding transcrip 55.3 1.7E+02 0.0037 26.8 12.5 19 20-38 47-65 (292)
448 PF04218 CENP-B_N: CENP-B N-te 55.2 6.4 0.00014 25.7 1.0 18 20-37 23-40 (53)
449 cd06568 GH20_SpHex_like A subg 54.5 38 0.00081 32.0 6.4 58 184-242 33-92 (329)
450 PRK09108 type III secretion sy 51.9 9.1 0.0002 36.3 1.8 25 224-248 290-314 (353)
451 COG2973 TrpR Trp operon repres 51.0 8 0.00017 28.5 1.0 17 21-37 62-78 (103)
452 PF12116 SpoIIID: Stage III sp 50.9 6.6 0.00014 27.9 0.6 20 21-40 21-40 (82)
453 PRK12468 flhB flagellar biosyn 50.4 10 0.00023 36.4 2.0 25 224-248 295-319 (386)
454 cd02742 GH20_hexosaminidase Be 50.2 34 0.00074 31.8 5.4 57 184-242 31-89 (303)
455 PRK05562 precorrin-2 dehydroge 50.2 1.8E+02 0.0039 25.6 10.4 94 126-246 25-119 (223)
456 PRK08156 type III secretion sy 49.9 9.4 0.0002 36.3 1.6 25 224-248 283-307 (361)
457 PRK04148 hypothetical protein; 49.1 75 0.0016 25.5 6.3 41 195-243 67-107 (134)
458 PRK06298 type III secretion sy 48.5 18 0.00039 34.4 3.2 25 224-248 289-313 (356)
459 PRK10401 DNA-binding transcrip 48.4 1.2E+02 0.0025 28.6 8.9 73 20-92 2-88 (346)
460 TIGR00721 tfx DNA-binding prot 48.3 15 0.00033 29.5 2.3 17 21-37 23-39 (137)
461 TIGR01481 ccpA catabolite cont 47.9 1E+02 0.0022 28.6 8.4 29 20-48 2-31 (329)
462 TIGR01404 FlhB_rel_III type II 47.9 11 0.00024 35.6 1.7 25 224-248 287-311 (342)
463 cd06563 GH20_chitobiase-like T 47.8 43 0.00093 32.0 5.7 26 217-242 78-103 (357)
464 PF13404 HTH_AsnC-type: AsnC-t 47.7 4.6 0.0001 24.9 -0.6 26 13-39 12-37 (42)
465 PF04967 HTH_10: HTH DNA bindi 46.5 4.7 0.0001 26.4 -0.7 20 21-40 25-44 (53)
466 TIGR00328 flhB flagellar biosy 46.4 19 0.00042 34.0 3.1 25 224-248 288-312 (347)
467 TIGR01764 excise DNA binding d 46.3 6.3 0.00014 24.6 -0.1 22 21-42 3-24 (49)
468 KOG1546 Metacaspase involved i 45.9 1.6E+02 0.0034 27.5 8.5 39 215-253 172-211 (362)
469 COG1648 CysG Siroheme synthase 45.7 1.7E+02 0.0036 25.6 8.6 96 124-246 10-106 (210)
470 TIGR00498 lexA SOS regulatory 45.7 4.9 0.00011 34.7 -0.9 28 20-47 26-58 (199)
471 COG2984 ABC-type uncharacteriz 45.6 2.6E+02 0.0056 26.1 10.3 151 77-248 43-198 (322)
472 PRK10727 DNA-binding transcrip 45.2 1.3E+02 0.0028 28.2 8.7 31 20-50 2-33 (343)
473 TIGR00789 flhB_rel flhB C-term 45.2 20 0.00043 25.9 2.3 25 225-249 27-51 (82)
474 PRK12721 secretion system appa 44.7 21 0.00046 33.8 3.1 25 224-248 288-312 (349)
475 PRK11303 DNA-binding transcrip 44.7 1.8E+02 0.0039 26.9 9.5 20 21-40 2-21 (328)
476 smart00642 Aamy Alpha-amylase 44.5 31 0.00068 28.8 3.8 27 223-249 68-94 (166)
477 PF00356 LacI: Bacterial regul 44.1 20 0.00043 22.6 1.9 19 21-39 1-19 (46)
478 PF07453 NUMOD1: NUMOD1 domain 43.4 13 0.00028 22.0 0.9 20 17-36 14-33 (37)
479 PF13241 NAD_binding_7: Putati 43.1 92 0.002 23.4 5.9 86 123-242 4-89 (103)
480 PF08279 HTH_11: HTH domain; 42.9 8.7 0.00019 25.0 0.2 20 20-39 16-35 (55)
481 smart00354 HTH_LACI helix_turn 42.4 23 0.00049 24.6 2.2 18 20-37 1-18 (70)
482 PF05225 HTH_psq: helix-turn-h 41.9 12 0.00025 23.5 0.6 19 20-38 17-35 (45)
483 PF00728 Glyco_hydro_20: Glyco 41.8 18 0.0004 34.2 2.3 58 184-242 33-90 (351)
484 COG3415 Transposase and inacti 41.8 10 0.00022 30.5 0.4 18 21-38 23-40 (138)
485 PRK05702 flhB flagellar biosyn 41.5 26 0.00056 33.4 3.1 25 224-248 295-319 (359)
486 cd06570 GH20_chitobiase-like_1 40.9 81 0.0018 29.4 6.3 53 184-242 33-85 (311)
487 PF06056 Terminase_5: Putative 40.9 11 0.00024 25.2 0.4 18 21-38 15-32 (58)
488 cd06562 GH20_HexA_HexB-like Be 40.0 71 0.0015 30.4 5.9 55 184-242 33-87 (348)
489 PF02954 HTH_8: Bacterial regu 39.7 7.3 0.00016 23.9 -0.6 19 22-40 21-39 (42)
490 cd04762 HTH_MerR-trunc Helix-T 39.6 8.6 0.00019 23.9 -0.3 19 21-39 2-20 (49)
491 PLN03244 alpha-amylase; Provis 39.2 51 0.0011 34.8 4.9 37 217-253 433-469 (872)
492 TIGR02104 pulA_typeI pullulana 38.9 37 0.0008 35.1 4.0 35 213-250 220-254 (605)
493 COG0514 RecQ Superfamily II DN 38.7 39 0.00085 34.4 4.0 104 128-252 37-146 (590)
494 PRK12773 flhB flagellar biosyn 38.7 19 0.00041 36.4 1.8 25 224-248 587-611 (646)
495 PRK10423 transcriptional repre 38.7 1.5E+02 0.0033 27.3 8.1 29 22-50 1-30 (327)
496 PF05687 DUF822: Plant protein 38.3 1.8E+02 0.004 23.4 6.8 22 379-400 45-66 (150)
497 PF13518 HTH_28: Helix-turn-he 38.3 14 0.0003 23.6 0.6 17 21-37 14-30 (52)
498 TIGR02531 yecD_yerC TrpR-relat 38.1 12 0.00026 27.5 0.3 18 21-38 52-69 (88)
499 PRK03975 tfx putative transcri 37.4 33 0.00071 27.8 2.7 65 21-87 23-89 (141)
500 TIGR02417 fruct_sucro_rep D-fr 37.3 2.6E+02 0.0056 25.8 9.4 20 21-40 1-20 (327)
No 1
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-62 Score=477.81 Aligned_cols=406 Identities=23% Similarity=0.333 Sum_probs=336.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccc---cccCC-CCCCcHHHHH-----------HHHHHH--hcCCCCc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGN---LGKLQ-AGYLFPEIAR-----------RKAAHM--LKYPDAE 64 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~---~~~l~-~g~~~~~~~~-----------~~~~~~--~~~~~~~ 64 (433)
++++.+|.+|+|++|+||||+|+||+.++||++|+ |..+. +||+.+++++ ...... .....+.
T Consensus 11 ~~i~~~I~~g~l~~g~rLPs~R~la~~l~vs~~Tv~~ay~~L~~~G~i~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (459)
T COG1167 11 EQLREAILSGRLKPGDRLPSIRQLAQDLGVSRSTVSRAYEELEARGYIESRPGSAPPSGRPVRLELLKPSDPELLEDDPS 90 (459)
T ss_pred HHHHHHHHcCCCCCCCcCCcHHHHHHHhCCcHHHHHHHHHHHHhCcceeeccCCCcccccccccchhhhhhcccccCCCc
Confidence 57899999999999999999999999999999996 55554 4898887642 100000 0012257
Q ss_pred eEEecCCCCCC-CChHHHHH-HHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHh--ccCCCCCCcEEEcCChHHHHH
Q 045431 65 VISLGIGDTTE-PIPEVITS-ALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY--KDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 65 ~i~l~~g~~~~-~~~~~~~~-a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~--~~~~~~~~~i~~~~G~~~al~ 140 (433)
+++|+.|.|+. .+|...++ ++.+.+..... .....|++..|.++||+++++++. +++.+++++|++|+|++++++
T Consensus 91 ~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~-~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~ 169 (459)
T COG1167 91 VIDFAGGLPDPSLFPLEALRRALARVLRNYGA-SLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALD 169 (459)
T ss_pred eecCCCCCCCcccCCHHHHHHHHHHHHhhcch-hhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHH
Confidence 89999998753 35555554 44444443321 226688888999999999999997 488899999999999999999
Q ss_pred HH-HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC---CCCccEEEEc-CC
Q 045431 141 RL-QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST---VARTDIIFFC-SP 214 (433)
Q Consensus 141 ~l-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~l~-~p 214 (433)
++ ..+++|||+|++++|+|++...+++.+| .+++.+|+|++ +++++ ++. ..++|++|++ +.
T Consensus 170 l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g------------~~~~~vp~d~~-G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 170 LLLRLLLDPGDTVLVEDPTYPGALQALEALG------------ARVIPVPVDED-GIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred HHHHHhCCCCCEEEEcCCCcHHHHHHHHHcC------------CcEEecCCCCC-CCCHHHHHHHHhhcCCcEEEECCCC
Confidence 85 7778999999999999999999999999 58999999855 55544 333 2369998887 67
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|||||.+||.+++++|+++|++||++|||||+|+++.+++. +.++..++. +++|||++||||+++ ||+|+||+++|+
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~ 314 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPP 314 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCH
Confidence 99999999999999999999999999999999999999865 456777765 689999999999995 999999999999
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhc---CCeeecCCCc
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSL---GFKVYGGKNA 369 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~---g~~~~~~~~g 369 (433)
+++ +.+.+.+.....+++.++|.+....+.++.+ +|++++++.|+++++.+.+.|+++ +..+..|.+|
T Consensus 315 ~~~--------~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG 386 (459)
T COG1167 315 ELI--------EKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGG 386 (459)
T ss_pred HHH--------HHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCce
Confidence 985 7888888888889999999999999985444 799999999999999999999997 3678888999
Q ss_pred cEEEEECCC-CChHHHHHHHHHcCCeEecC-CCCCCCCC--CCeEEEeecc-ChhHHHHHHHHHHHhh
Q 045431 370 PYVWVQFPG-RSSWDVFSEILEKTHVVTTP-GSGFGPGG--EGFIRVSAFG-HRGNVLEACKRFKHLY 432 (433)
Q Consensus 370 ~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~-g~~f~~~~--~~~iRi~~~~-~~~~l~~~l~~l~~~l 432 (433)
+|+|++++. .+..+++..++++ ||.+.| |..|...+ .+++||+++. +++++++++++|.+++
T Consensus 387 ~flwl~l~~~~~~~~l~~~a~~~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~ 453 (459)
T COG1167 387 LFLWLELPEGIDARELLAAALEK-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALL 453 (459)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHC-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 999999994 5677777777665 999999 99987543 5689999865 7999999999998875
No 2
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-60 Score=449.79 Aligned_cols=346 Identities=33% Similarity=0.535 Sum_probs=308.0
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCc-EEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGD-IFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~-i~~~~G~~~al 139 (433)
.++|+|+.|+|+++.|+.+.+++.+++... .. .|++..|.++||++|++++.+ ++.+++++ |++|+|+++++
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~----~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEG----GT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcc----cC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 469999999999999999999999998752 22 777999999999999999997 55567766 99999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCcc-CCcccCCCC-----CCCccEEEEc
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAE-NGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~i~l~ 212 (433)
.+ +.++++|||+|++++|.|+.|......+| ..++.++.+.+ .+|.++++. ++++|+|+++
T Consensus 103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~g------------g~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln 170 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAG------------GKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILN 170 (393)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcC------------CEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEe
Confidence 97 68899999999999999999999999999 58888887654 477777542 4689999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
+||||||.+++++++++|+++|++|+++||.||+|.++.+++. +.++.++....+++|+++||||+++++|||+||+++
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~ 250 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG 250 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeec
Confidence 9999999999999999999999999999999999999999984 778887765468899999999999999999999999
Q ss_pred c-ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhc-CCeeec-CC
Q 045431 292 P-KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSL-GFKVYG-GK 367 (433)
Q Consensus 292 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~ 367 (433)
+ ++++ +.+..+......+++.++|.++.++|+.... ..++.+++.|++||+.+.+.|.+. |+.+.. |.
T Consensus 251 ~~~~l~--------~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~ 322 (393)
T COG0436 251 PPEELI--------AALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE 322 (393)
T ss_pred ChHHHH--------HHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC
Confidence 9 5554 6677777888888999999999999996543 567888899999999999999988 598887 78
Q ss_pred CccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCC-CCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 368 NAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPG-GEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 368 ~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~-~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+++|+|++++. .++.++...|++++||.+.||..|+.. +.++|||+++.+.+++++++++|.++++
T Consensus 323 Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 323 GAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLA 390 (393)
T ss_pred eeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHH
Confidence 99999999995 688999999999999999999999985 8999999998888999999999998763
No 3
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3e-59 Score=456.96 Aligned_cols=398 Identities=17% Similarity=0.177 Sum_probs=316.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccc---cccCC-CCCCcHHHHHHHHH--------HHhcCCCCceEEec
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGN---LGKLQ-AGYLFPEIARRKAA--------HMLKYPDAEVISLG 69 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~---~~~l~-~g~~~~~~~~~~~~--------~~~~~~~~~~i~l~ 69 (433)
++++++|.+|+|++|+||||+|+||+.++|||+|+ |..|. +|++....+++... ......+..+++|+
T Consensus 12 ~~i~~~i~~g~l~~g~~lps~r~la~~~~vsr~tv~~a~~~L~~~g~i~~~~~~G~~v~~~~~~~~~~~~~~~~~~i~L~ 91 (431)
T PRK15481 12 DSIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPSPVALEGGDPGTPLHDLA 91 (431)
T ss_pred HHHHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeCCCceEEccCcchhhhcccCCcchhhhhh
Confidence 56889999999999999999999999999999996 33332 35554432211100 00011223578999
Q ss_pred CCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCC
Q 045431 70 IGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGS 148 (433)
Q Consensus 70 ~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~ 148 (433)
.|.|+.+.++.+.+++.+... ....|+++.|.++||+++++|+.+..+ ++++|++|+|+++++.+ +..+++|
T Consensus 92 ~g~p~~~~~p~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l~~p 164 (431)
T PRK15481 92 GGNPDPQRLPDLSRYFARLSR------TPRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAHLLP 164 (431)
T ss_pred cCCCChhHhHHHHHHHHHhhh------hhhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHhCCC
Confidence 999877666667777766543 235798899999999999999865332 45799999999999997 5788899
Q ss_pred CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEc-CCCCccccCCCH
Q 045431 149 NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFC-SPNNPTGAAATR 224 (433)
Q Consensus 149 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~-~p~nPtG~~~~~ 224 (433)
||.|++++|+|+.+...++.+| .+++.++.+.+ ++..+ +++ ..++++++++ |||||||.++|.
T Consensus 165 gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~-g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~ 231 (431)
T PRK15481 165 GDSVAVEDPCFLSSINMLRYAG------------FSASPVSVDAE-GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA 231 (431)
T ss_pred CCEEEEeCCCcHHHHHHHHHcC------------CeEEeeccCCC-CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence 9999999999999999999999 47888888644 44332 222 2478999998 999999999999
Q ss_pred HHHHHHHHHHHHc-CCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch
Q 045431 225 EQLTRLVQFAKDN-GSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 225 ~~~~~i~~~a~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
+++++|+++|++| +++||+||+|.++.+++.+ +.... ..+++|+++||||++| ||+|+||++++++++
T Consensus 232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~-~~~~~--~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~------- 300 (431)
T PRK15481 232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPYH-SVIPQ--TTQRWALIRSVSKALG-PDLRLAFVASDSATS------- 300 (431)
T ss_pred HHHHHHHHHHHhcCCceEEecCchhhhccCCCC-CCCcC--CCCCEEEEeeeccccC-CCceeEEEeCCHHHH-------
Confidence 9999999999999 9999999999998765432 22222 2468999999999999 999999999998875
Q ss_pred hHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChH
Q 045431 304 AKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSW 382 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~ 382 (433)
+.+.........+++.++|.++.++|++..+ +|++++++.++++++.+.+.|+++|+.+..|.+|+|+|++++. +..
T Consensus 301 -~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~-~~~ 378 (431)
T PRK15481 301 -ARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT-DSQ 378 (431)
T ss_pred -HHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC-CHH
Confidence 6665544444455899999999999987654 6789999999999999999999998888778899999999984 455
Q ss_pred HHHHHHHHcCCeEecCCCCCCCC-CCCeEEEeecc-ChhHHHHHHHHHHHhhC
Q 045431 383 DVFSEILEKTHVVTTPGSGFGPG-GEGFIRVSAFG-HRGNVLEACKRFKHLYK 433 (433)
Q Consensus 383 ~~~~~l~~~~gi~v~~g~~f~~~-~~~~iRi~~~~-~~~~l~~~l~~l~~~l~ 433 (433)
++...+. ++||.+.||..|+.. ..+++||+++. +++++++++++|++++.
T Consensus 379 ~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 379 ATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred HHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 6666665 569999999999643 34689999875 78999999999999874
No 4
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=8.4e-58 Score=443.71 Aligned_cols=397 Identities=51% Similarity=0.872 Sum_probs=321.7
Q ss_pred ccccccCCCCCCcHHHHHHHHHHHhcCCCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHH
Q 045431 34 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAA 113 (433)
Q Consensus 34 ~t~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ 113 (433)
|..|..+..+|.+.++..+......++.++++++|+.|+|++++|+.+.+++.+++.+.........|+++.|.++||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a 84 (409)
T PRK07590 5 NENYLKLKAGYLFPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREK 84 (409)
T ss_pred ccccCccCCcchHHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHH
Confidence 34567777788888887776666666656679999999999999999999999888753211245689999999999999
Q ss_pred HHHHHhc--cCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecC
Q 045431 114 IASTFYK--DLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCT 191 (433)
Q Consensus 114 la~~l~~--~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 191 (433)
+|+|+.+ ++++++++|++|+|+++++.++..++.+||+|++++|+|+.+...++..|..++.. ....|.+++.++.+
T Consensus 85 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~-~~~~~~~~~~v~~~ 163 (409)
T PRK07590 85 IAENDYQARGCDISADEIFISDGAKCDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEAN-EDGRYSGIVYLPCT 163 (409)
T ss_pred HHHHHHHhcCCcCChhhEEECCCHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCccccc-ccccccceeEeecc
Confidence 9999864 77889999999999999999877778999999999999999999999999653311 11112348888887
Q ss_pred ccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceE
Q 045431 192 AENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAI 270 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi 270 (433)
.++++..++.. .++++|++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|
T Consensus 164 ~~~~~~~d~~~-~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi 242 (409)
T PRK07590 164 AENNFVPELPE-EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAI 242 (409)
T ss_pred cccCCcccCcc-cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceE
Confidence 66667666544 6899999999999999999999999999999999999999999999887654 456666655456899
Q ss_pred EEecccccccccccceeeeeccccccccC----CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHH
Q 045431 271 ETSSFSKYAGFTGVRLGWTVIPKELLFSD----GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYK 346 (433)
Q Consensus 271 ~i~S~sK~~~~~G~r~G~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 346 (433)
+++||||++|+||+|+||++++++++... .......+.........+++.++|.++..++.+.+..+++++++.++
T Consensus 243 ~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~ 322 (409)
T PRK07590 243 EFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYM 322 (409)
T ss_pred EEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999886210 00000112222222334578899999988887655678999999999
Q ss_pred HHHHHHHHHHhhcCCeeecCCCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHH
Q 045431 347 ENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEAC 425 (433)
Q Consensus 347 ~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l 425 (433)
++++.+.+.|+++|+.+..+.+|+|+|+++++ .++.++...+++++||.+.||+.|+..+.+++||+++.+++++++++
T Consensus 323 ~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l 402 (409)
T PRK07590 323 ENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAM 402 (409)
T ss_pred HHHHHHHHHHHhcCCceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHH
Confidence 99999999999998888878899999999984 45677788888778999999999987667899999877899999999
Q ss_pred HHHHHhh
Q 045431 426 KRFKHLY 432 (433)
Q Consensus 426 ~~l~~~l 432 (433)
++|++++
T Consensus 403 ~rl~~~~ 409 (409)
T PRK07590 403 ERIKKAL 409 (409)
T ss_pred HHHHhhC
Confidence 9999864
No 5
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=4.6e-56 Score=430.59 Aligned_cols=399 Identities=53% Similarity=0.936 Sum_probs=320.9
Q ss_pred ccccccccCCCCCCcHHHHHHHHHHHhcCCCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHH
Q 045431 32 SRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLR 111 (433)
Q Consensus 32 s~~t~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr 111 (433)
.||.++.+++.++++..+...........++.++|+|+.|+|++++++.+.+++.+.+.+.........|++..|.++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr 81 (402)
T TIGR03542 2 KRNPHFLKLKSSYLFSEINRRVNEFRKKHPSADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLR 81 (402)
T ss_pred ccCCCccccCcchHHHHHHHHHHHHHhccCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHH
Confidence 46788888888888887766655554444567899999999998889999999998887532212345798889999999
Q ss_pred HHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecC
Q 045431 112 AAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCT 191 (433)
Q Consensus 112 ~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 191 (433)
+++|+++.+. ++++++|++|+|+++++.++..++.+||+|++++|+|+.+...++..|..++....+. +.+++.++.+
T Consensus 82 ~aia~~~~~~-~~~~d~I~it~Ga~~al~~l~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~v~~~ 159 (402)
T TIGR03542 82 EAIAENDYRG-RIDPEEIFISDGAKCDVFRLQSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGR-YSKITYLPCT 159 (402)
T ss_pred HHHHHHHHhc-CCCHHHEEECCCcHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccc-cceEEEeecc
Confidence 9999987542 3789999999999999998777789999999999999999999999996444322211 2267778876
Q ss_pred ccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceE
Q 045431 192 AENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAI 270 (433)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi 270 (433)
.++++..++....++++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi 239 (402)
T TIGR03542 160 KENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAI 239 (402)
T ss_pred hhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEE
Confidence 5556666665446889999999999999999999999999999999999999999999887653 455666655456899
Q ss_pred EEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHH
Q 045431 271 ETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 271 ~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 350 (433)
+++||||.+|+||+|+||++++++++..........+.........+++.++|.++..++.+....++.+.++.++++++
T Consensus 240 ~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 319 (402)
T TIGR03542 240 EFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENAR 319 (402)
T ss_pred EEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHH
Confidence 99999999999999999999998874221111123333323333445788999998888886655667778899999999
Q ss_pred HHHHHHhhcCCeeecCCCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHH
Q 045431 351 IIVETFNSLGFKVYGGKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFK 429 (433)
Q Consensus 351 ~l~~~l~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~ 429 (433)
.+.+.|++.|+.+.++.+|+|+|++++. .++.+++..+++++||.+.||+.|+..+.+++||+++.+++++++++++|+
T Consensus 320 ~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~ 399 (402)
T TIGR03542 320 ILRKALEAAGFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIK 399 (402)
T ss_pred HHHHHHHhcCceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence 9999999988888777889999999984 466788888887789999999999766678999998779999999999999
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
++|
T Consensus 400 ~~~ 402 (402)
T TIGR03542 400 EAL 402 (402)
T ss_pred hhC
Confidence 875
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=8.9e-55 Score=420.33 Aligned_cols=347 Identities=24% Similarity=0.415 Sum_probs=288.3
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~ 137 (433)
.+.++|+|+.|++++++|+.+.+++.+.+.. ....+|++..|.++||+++|+|+.+ +++++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~ 103 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHD----PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE 103 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----cccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence 3456899999999998899999999887753 3456798889999999999999975 6778888 6999999999
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEE
Q 045431 138 DISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFF 211 (433)
Q Consensus 138 al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l 211 (433)
++.+ +..++++||.|++++|+|+.+...++..| .+++.++.+.++++..+++. ..+++++++
T Consensus 104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 171 (388)
T PRK07366 104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAG------------GQIYPMPLRAENDFLPVFADIPTEVLAQARLMVL 171 (388)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEEECCCccCCCCCHHHHHHhhcccceEEEE
Confidence 9997 47788999999999999999999999999 48888998766666555332 257899999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcccccCCCCcceEEEecccccccccccceeee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN--PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
+|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|+++||||++|+||+|+||+
T Consensus 172 ~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~ 251 (388)
T PRK07366 172 SYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFA 251 (388)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheeh
Confidence 99999999999999999999999999999999999999987653 3456666543457899999999999999999999
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCc
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNA 369 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g 369 (433)
+++++++ +.+.+.......+.+...|.++.+.+.. ..+++++.++.++++++.+.+.|+++|+.+..|.+|
T Consensus 252 v~~~~li--------~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g 322 (388)
T PRK07366 252 IGNAQLI--------QALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEAT 322 (388)
T ss_pred cCCHHHH--------HHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCee
Confidence 9998885 6666655544433333334445555542 346889999999999999999999988887778899
Q ss_pred cEEEEECCCC---ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 370 PYVWVQFPGR---SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 370 ~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+|+|++++.. ++.++...+++++||.+.||+.|+..+.+++||+++.+.+++++++++|++++
T Consensus 323 ~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 323 MYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred EEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 9999999842 45677778877889999999999765678999999888999999999999864
No 7
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=6.6e-54 Score=415.45 Aligned_cols=344 Identities=24% Similarity=0.351 Sum_probs=295.0
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al 139 (433)
.++|+|+.|.|++++|+.+.+++.+.+.+ ....|++..|.++||+++++++.+ ++.++++ +|++|+|+++++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRD-----GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhc-----CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 36899999999988899999999888763 346899999999999999999985 6667787 799999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC---CCC--CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD---LST--VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~i~l~~ 213 (433)
.+ +..+++|||+|++++|+|+.+...++..| .+++.++.+.++ +..+ +++ .+++++|+++|
T Consensus 129 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~-~~~~~~~l~~~~~~~~k~i~i~~ 195 (413)
T PLN00175 129 AATILGLINPGDEVILFAPFYDSYEATLSMAG------------AKIKTVTLRPPD-FAVPEDELKAAFTSKTRAILINT 195 (413)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcC------------CEEEEEECCccc-CCCCHHHHHHhcCcCceEEEecC
Confidence 87 57788999999999999999999999999 478888886542 3333 222 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.++.++++..+++|+++||||.|+++|+|+||+++++
T Consensus 196 p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~ 275 (413)
T PLN00175 196 PHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP 275 (413)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH
Confidence 99999999999999999999999999999999999988876555676776556789999999999999999999999999
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+++ +.+.........+++.+.|.++.++|++. ..++++.++.|+++++.+.+.|+++|+.+..|.+|+|+|
T Consensus 276 ~l~--------~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~ 346 (413)
T PLN00175 276 HLT--------WGVRQAHSFLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVM 346 (413)
T ss_pred HHH--------HHHHHHHhhccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEE
Confidence 885 66766666566778999999999999753 568899999999999999999999999988888999999
Q ss_pred EECC--CC-ChHHHHHHHHHcCCeEecCCCCCCC---CCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 374 VQFP--GR-SSWDVFSEILEKTHVVTTPGSGFGP---GGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 374 ~~~~--~~-~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
++++ +. ++.++...+++++||.+.||..|+. .+.+++||+++.+++++++++++|+++++
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 347 VDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred EeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9985 33 4578888888888999999999863 24679999998899999999999998864
No 8
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-53 Score=413.61 Aligned_cols=343 Identities=26% Similarity=0.480 Sum_probs=292.7
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCC-CcEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEE-GDIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~-~~i~~~~G~~~a 138 (433)
+.++|+|+.|+|++++++.+.+++.+.+.. .....|. ..|.++||++||+|+.+ ++.+++ ++|++|+|++++
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 105 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ----KESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc----cccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence 457999999999988888888888887653 2234564 58999999999999975 677888 899999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.+ +..++++||.|++++|+|+.+...++..| .+++.++.+.++++..+++. .+++++|+++
T Consensus 106 l~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~ 173 (399)
T PRK07681 106 LVHLPMVYANPGDIILVPDPGYTAYETGIQMAG------------ATSYYMPLKKENDFLPDLELIPEEIADKAKMMILN 173 (399)
T ss_pred HHHHHHHhCCCCCEEEECCCCccchHHHHHhcC------------CEEEEEecCCCCCCcCCHHHHHHhccccceEEEEe
Confidence 997 57788999999999999999999999999 58888998766566554332 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|+++||||.+|++|+|+||+++
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~ 253 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG 253 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec
Confidence 9999999999999999999999999999999999999887653 455666655457899999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
+++++ +.+.........+++.+.|.++.+++++. ..++++.++.++++++.+.+.|+++|+.+..|.+|+|
T Consensus 254 ~~~l~--------~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f 324 (399)
T PRK07681 254 NEEIV--------RALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMF 324 (399)
T ss_pred CHHHH--------HHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeE
Confidence 98885 66766665555678899999999999853 4678899999999999999999999988877889999
Q ss_pred EEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHH
Q 045431 372 VWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 372 ~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
+|++++ +.++.++...+++++||.+.||..|+..+++++||+++.+.+++++++++|++
T Consensus 325 ~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 325 VWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 999998 44677888888886799999999998666789999998888999999999987
No 9
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-53 Score=411.14 Aligned_cols=347 Identities=25% Similarity=0.441 Sum_probs=289.6
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~a 138 (433)
+.++++|+.|.|+.+.|+.+++++.+.+.. .....|++..|.++||+++|+|+++ ++.++++ +|++|+|++++
T Consensus 32 ~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 32 GEDIIDFSMGNPDGPTPQHIIDKLCESAQK----PKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred CCCEEEcCCcCCCCCCCHHHHHHHHHHhcC----CccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 456899999999877788788888776642 3457899899999999999999975 6667887 79999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC-------C-----CCC
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS-------T-----VAR 205 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~ 205 (433)
+.+ +..++++||.|++++|+|+.+...++..| .+++.++.+.++++..+++ + ..+
T Consensus 108 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 108 YVHLVQAITNPGDVAIVPDPAYPIHSQAFILAG------------GNVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 997 57888999999999999999999999999 4788887753332332221 1 247
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEeccccccccccc
Q 045431 206 TDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGV 284 (433)
Q Consensus 206 ~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~ 284 (433)
+++++++|||||||.++|.+++++|+++|++|+++||+||+|+++.+++. ..++.+++...+++|+++||||++|+||+
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 88999999999999999999999999999999999999999999888753 45666665545678999999999999999
Q ss_pred ceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeee
Q 045431 285 RLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVY 364 (433)
Q Consensus 285 r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 364 (433)
|+||++++++++ +.+.+.......+++.+.|.++..+++ ....+++++++.++++++.+.+.|++.|+.+.
T Consensus 256 RiG~iv~~~~li--------~~~~~~~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 256 RVGFVVGNKKLV--------GALKKIKSWLDYGMFTPIQVAATIALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred eeeeeeCCHHHH--------HHHHHHHHHhcccCChHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 999999999885 666665554445567888888777665 33578899999999999999999999888888
Q ss_pred cCCCccEEEEECCC----CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 365 GGKNAPYVWVQFPG----RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 365 ~~~~g~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
.|.+|+|+|++++. .++.++...+++++||.+.||..|+..+.+++||+++.+++++++++++|+++++
T Consensus 327 ~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~ 399 (403)
T PRK08636 327 KPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLK 399 (403)
T ss_pred CCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 88899999999983 2356777787877899999999998766789999998889999999999998763
No 10
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-53 Score=407.83 Aligned_cols=343 Identities=25% Similarity=0.397 Sum_probs=290.6
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~ 140 (433)
+++|+|+.|+|++++++.+.+++.+... .....|+++.|.++||+++|+|+.+ ++++++++|++|+|+++++.
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~ 103 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAK-----KGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY 103 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence 3589999999998888888776666543 3456899999999999999999975 77889999999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcCC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCSP 214 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~p 214 (433)
+ +..++++||+|++++|+|+.+...++.+| ..++.++.++++++..+++. .+++++|++++|
T Consensus 104 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p 171 (384)
T PRK06348 104 LALQSILDPGDEVIIHEPYFTPYKDQIEMVG------------GKPIILETYEEDGFQINVKKLEALITSKTKAIILNSP 171 (384)
T ss_pred HHHHHhcCCCCEEEEeCCCCcchHHHHHHcC------------CEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCC
Confidence 7 57788999999999999999999999998 36777776544454444332 257899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
|||||.++|.+++++|+++|++|+++||+||+|.++.+++...++.++++..+++|+++||||++|+||+|+||++++++
T Consensus 172 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~ 251 (384)
T PRK06348 172 NNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY 251 (384)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH
Confidence 99999999999999999999999999999999999888755456666654467899999999999999999999999988
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVW 373 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~ 373 (433)
++ +.+.........+++.++|.++..++.. ..++++++++.++++++.+.+.|++. ++.+..|.+|+|+|
T Consensus 252 ~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~ 322 (384)
T PRK06348 252 II--------ETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAF 322 (384)
T ss_pred HH--------HHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEE
Confidence 75 6676666555566899999999988873 34678899999999999999999887 77878888999999
Q ss_pred EECC--CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 374 VQFP--GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 374 ~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
++++ +.++.++...+++++||.+.||+.|+..+++++||+++.+.+++++++++|+++
T Consensus 323 ~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 323 INIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 9997 356778888888778999999999986667899999988899999999999875
No 11
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.7e-53 Score=409.40 Aligned_cols=347 Identities=27% Similarity=0.473 Sum_probs=294.1
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~ 137 (433)
.+.++|+|+.|+|++++|+.+++++.+.+.. .....|+++.|.++||+++|+|+.+ ++.++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~ 103 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQD----PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE 103 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcC----cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 3457899999999888889999988887642 3456898889999999999999975 6667787 8999999999
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEE
Q 045431 138 DISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFF 211 (433)
Q Consensus 138 al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l 211 (433)
++.+ +..++++||+|++++|+|+.+...+...| .+++.++.+.++.+..++++ .++++++++
T Consensus 104 al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l 171 (405)
T PRK09148 104 GFANMAQAITAPGDVILCPNPSYPIHAFGFIMAG------------GVIRSVPAEPDEEFFPALERAVRHSIPKPIALIV 171 (405)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcC------------CEEEEEeCCCCCCCccCHHHHHhhccccceEEEE
Confidence 9997 57788999999999999999998888888 47888888766555544432 257889999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
++||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|+++||||.+|+||+|+||++
T Consensus 172 ~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v 251 (405)
T PRK09148 172 NYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV 251 (405)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeee
Confidence 99999999999999999999999999999999999999887653 34555555445678999999999999999999999
Q ss_pred ccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCcc
Q 045431 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAP 370 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~ 370 (433)
++++++ +.+.+.......+++.+.|.++.+++++ ...+++++++.++++++.+.+.|+++|+.+..|.+|+
T Consensus 252 ~~~~~i--------~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 322 (405)
T PRK09148 252 GNERLI--------AALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASM 322 (405)
T ss_pred CCHHHH--------HHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeE
Confidence 998885 6777766665666788999999999974 3468899999999999999999999988877788999
Q ss_pred EEEEECCCC----ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 371 YVWVQFPGR----SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 371 ~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
|+|++++.. ...++...+++++||.+.||..|+..+++++||++..+.+++++++++|++++
T Consensus 323 f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 323 FAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred EEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999842 34677778887779999999999765678999999888999999999998875
No 12
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-54 Score=390.14 Aligned_cols=362 Identities=28% Similarity=0.431 Sum_probs=298.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCceEE-ecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--
Q 045431 44 YLFPEIARRKAAHMLKYPDAEVIS-LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-- 120 (433)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~i~-l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-- 120 (433)
+++.++.++..... ..+ |+.|.|++++|+.+.+++.+.+.. ....+|++..|.++|+++|++.++.
T Consensus 18 ~vw~e~~~la~e~~-------~~~~LgqGfp~~~~P~fv~ea~~~~~~~----~~~~qYt~~~G~p~L~~aL~k~~se~~ 86 (420)
T KOG0257|consen 18 YVWTEINRLAAEHK-------VPNPLGQGFPDFPPPKFVTEAAKNAAKE----PSTNQYTRGYGLPQLRKALAKAYSEFY 86 (420)
T ss_pred cHHHHHHHHHHhcC-------CCCcccCCCCCCCCcHHHHHHHHHHhcc----chhccccccCCchHHHHHHHHHHHHHh
Confidence 67777766544322 223 999999999999999999999975 3567899999999999999999886
Q ss_pred -cCCCCCCcEEEcCChHHHHH-HHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCccc
Q 045431 121 -DLGIEEGDIFVSDGAKCDIS-RLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 198 (433)
Q Consensus 121 -~~~~~~~~i~~~~G~~~al~-~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (433)
+...+.++|++|+|+.+++. .+..+|++||+|++.+|.|..|....+++|..++++..+..+.+ + ....+..
T Consensus 87 ~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~-~-----~s~~~~~ 160 (420)
T KOG0257|consen 87 GGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGN-V-----SSSDWTL 160 (420)
T ss_pred ccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeecccccccc-c-----cCccccC
Confidence 44446788999999999998 58999999999999999999999999999976554333322222 0 1223333
Q ss_pred CCC-----CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEE
Q 045431 199 DLS-----TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIET 272 (433)
Q Consensus 199 ~~~-----~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i 272 (433)
|.+ -++++|+|++|+||||||.++|++++++|+++|++||++||.||+|..+.+++. ...+.+++++.+++|.+
T Consensus 161 D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitv 240 (420)
T KOG0257|consen 161 DPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITV 240 (420)
T ss_pred ChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEe
Confidence 322 257999999999999999999999999999999999999999999999999986 67788889999999999
Q ss_pred ecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC-------hhHHHHHHHHH
Q 045431 273 SSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG-------FKAVHEVIGFY 345 (433)
Q Consensus 273 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~ 345 (433)
+|+||+||+.|||+||+++++.++ .....+........+.+.|.|..+++.... ..++..+.+.|
T Consensus 241 gS~gKtf~~TGWrlGW~igp~~L~--------~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y 312 (420)
T KOG0257|consen 241 GSFGKTFGVTGWRLGWAIGPKHLY--------SALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEY 312 (420)
T ss_pred ccccceeeeeeeeeeeeechHHhh--------hhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHH
Confidence 999999999999999999987775 555555555666678888888887776322 14567799999
Q ss_pred HHHHHHHHHHHhhcCCeeecCCCccEEEEECCC-------------CChHHHHHHHHHcCCeEecCCCCCCCCC-----C
Q 045431 346 KENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG-------------RSSWDVFSEILEKTHVVTTPGSGFGPGG-----E 407 (433)
Q Consensus 346 ~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~f~~~~-----~ 407 (433)
+++|+.+.+.|+++|+++..|++++|+|++++. .++-.+..+++++.|+.+.|++.|+... .
T Consensus 313 ~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~ 392 (420)
T KOG0257|consen 313 KEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAE 392 (420)
T ss_pred HHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHH
Confidence 999999999999999999999999999999981 0234567889999999999999998543 4
Q ss_pred CeEEEeeccChhHHHHHHHHHHH
Q 045431 408 GFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 408 ~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
+++|++++.+.+.++.++++|++
T Consensus 393 ~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 393 RLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhh
Confidence 57899999999999999999984
No 13
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=6.4e-53 Score=407.30 Aligned_cols=345 Identities=28% Similarity=0.480 Sum_probs=289.7
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~a 138 (433)
++++|+|+.|.|+.+.++.+.+++.+.+.. .....|++..|.++||+++|+|+.+ ++.++++ +|++|+|++++
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAEN----PANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 446899999999888788888888887753 3356898899999999999999975 6667888 89999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.. +..++++||.|++++|+|+.+...++..| .+++.++.+.+.++..+++. ..++++|+++
T Consensus 107 l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 174 (389)
T PRK08068 107 LVELPQCLMNPGDTILVPDPGYPDYLSGVALAR------------AQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLN 174 (389)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEeecccccCCCCCHHHHHHhccccceEEEEE
Confidence 987 57788999999999999999999999999 48888888765566555322 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-CCCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD-NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
|||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.++....+..+++++++||||+||++|+|+||+++
T Consensus 175 ~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 254 (389)
T PRK08068 175 YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG 254 (389)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec
Confidence 999999999999999999999999999999999999987765 3445444433356889999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
+++++ +.+.+.......+.+.+.|.++.+++.+ +..+++++++.++++++.+.+.|+++|+.+.+|.+|+|
T Consensus 255 ~~~l~--------~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~ 325 (389)
T PRK08068 255 NESVI--------EAINLLQDHLFVSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFF 325 (389)
T ss_pred CHHHH--------HHHHHHHhhccCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEE
Confidence 98885 6666665544455566778888888763 34788999999999999999999999988888888999
Q ss_pred EEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 372 VWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 372 ~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
+|+++++ .++.++...+++++||.+.||..|+..+++++||++..+++++++++++|+++
T Consensus 326 ~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 326 AWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 9999984 46677888887777999999999986667899999988889999999999874
No 14
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.6e-52 Score=404.15 Aligned_cols=344 Identities=33% Similarity=0.516 Sum_probs=292.4
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~a 138 (433)
++++++|+.|+|++++|+.+++++.+.+.. .....|+++.|.++||+++|+|+.+ ++.++++ +|++|+|++++
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAEN----PENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 457899999999988899999999987753 3356898889999999999999985 5666766 69999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.+ +..++++||.|++++|+|+.+...++.+| .+++.++.+.++++..+++. ..++++++++
T Consensus 104 l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G------------~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~ 171 (383)
T TIGR03540 104 IAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAG------------GEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFIN 171 (383)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcC------------CEEEEEecCcccCCccCHHHHHhhccccceEEEEe
Confidence 997 57778999999999999999999999999 48888888765555444321 3578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|+++||||.+|++|+|+||+++
T Consensus 172 ~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~ 251 (383)
T TIGR03540 172 YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG 251 (383)
T ss_pred CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence 9999999999999999999999999999999999999887653 455666654346789999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
+++++ +.+.........+++.+.|.++.+++.+. .++++++++.++++++.+.+.|+++|+.+..+.+|+|
T Consensus 252 ~~~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~ 322 (383)
T TIGR03540 252 NADLI--------AGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFY 322 (383)
T ss_pred CHHHH--------HHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceE
Confidence 98885 66666655555567888999999998753 5788999999999999999999999998888888999
Q ss_pred EEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHH
Q 045431 372 VWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 372 ~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
+|++++ +.++.++...+++++||.+.||..|+..+++++||++..+++++++++++|++
T Consensus 323 ~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 323 VWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 999998 45677888888777799999999997656789999998889999999999975
No 15
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-52 Score=404.43 Aligned_cols=345 Identities=18% Similarity=0.267 Sum_probs=285.7
Q ss_pred CceEEecCCCCC-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCC-CcEEEcCChHHH
Q 045431 63 AEVISLGIGDTT-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEE-GDIFVSDGAKCD 138 (433)
Q Consensus 63 ~~~i~l~~g~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~-~~i~~~~G~~~a 138 (433)
.+.|+|+.|.++ .++|+.+.+++.+.+.+ .....|++..|.++||+++++|+.+ ++.+++ ++|++|+|++++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVER----GGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhc----CCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 357999999987 45677888888887753 3346898899999999999999986 555777 899999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCc---cCCcccCCC---C--CCCccEE
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTA---ENGFFPDLS---T--VARTDII 209 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~--~~~~~~i 209 (433)
+.+ +..++++||+|++++|+|+.+...++..| .+++.++.+. +.++..+++ + ..+++++
T Consensus 115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v 182 (405)
T PRK06207 115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFE------------GEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVF 182 (405)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcC------------CEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEE
Confidence 997 57788999999999999999999999999 4777777652 222333322 1 2468899
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceee
Q 045431 210 FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 210 ~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
+++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. +.++..++...+++|+++||||++++||+|+||
T Consensus 183 ~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ 262 (405)
T PRK06207 183 LFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGV 262 (405)
T ss_pred EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEE
Confidence 9999999999999999999999999999999999999999988764 344544443457899999999999999999999
Q ss_pred eeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCC
Q 045431 289 TVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGK 367 (433)
Q Consensus 289 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~ 367 (433)
++++++++ +.+.........+.+.+.|.++.+++++. ..++++..+.++++++.+.+.|+++ ++.+..|.
T Consensus 263 ii~~~~l~--------~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~ 333 (405)
T PRK06207 263 AFGSPAII--------DRMEKLQAIVSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQ 333 (405)
T ss_pred EEcCHHHH--------HHHHHHHhHhccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC
Confidence 99998885 66766665555667888999999999742 3456777888889999999999887 78888888
Q ss_pred CccEEEEECCC--CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPG--RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+|+|+|++++. .+..++...+++++||.+.||..|+...++++||+++.+.+++++++++|++++
T Consensus 334 gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 334 AGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLI 400 (405)
T ss_pred eeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999984 356778877776779999999999766678999999888999999999999876
No 16
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.7e-52 Score=403.16 Aligned_cols=344 Identities=29% Similarity=0.419 Sum_probs=290.0
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDIS 140 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al~ 140 (433)
++|+|+.|+|++++++.+.+++.+.+. .....|++..|.++||+++|+|+.+ ++.++++ +|++|+|+++++.
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 95 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLE-----QGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALD 95 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence 589999999998888888888888764 2356798889999999999999986 6666775 8999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCccEEEEcCC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTDIIFFCSP 214 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~i~l~~p 214 (433)
+ +..++++||+|++++|+|+.+...++..| ..++.++.+.++++..+++ + .++++++++++|
T Consensus 96 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p 163 (378)
T PRK07682 96 VAMRAIINPGDEVLIVEPSFVSYAPLVTLAG------------GVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSP 163 (378)
T ss_pred HHHHHhCCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECC
Confidence 7 57788999999999999999999998888 3667777654333333322 2 257899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
|||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.++..+++..+++++++||||.+|+||+|+||++++++
T Consensus 164 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~ 243 (378)
T PRK07682 164 NNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVY 243 (378)
T ss_pred CCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHH
Confidence 99999999999999999999999999999999999988765455555554457899999999999999999999999998
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWV 374 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~ 374 (433)
++ +.+.........+++.++|.++.++|++. ..+++++++.++++++.+.+.|+++|+.+..|.+++|+|+
T Consensus 244 ~i--------~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~ 314 (378)
T PRK07682 244 FS--------EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFP 314 (378)
T ss_pred HH--------HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEE
Confidence 85 66665555555667899999999999743 4568899999999999999999999988888889999999
Q ss_pred ECC--CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 375 QFP--GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 375 ~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
.++ +.++.++...+++++||.+.||..|+..+++++||+++.+.+++++++++|+++++
T Consensus 315 ~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 315 SISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred eccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 985 45677788888777799999999997666789999998889999999999998863
No 17
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-52 Score=401.90 Aligned_cols=345 Identities=34% Similarity=0.546 Sum_probs=291.2
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~ 137 (433)
.+.++|+|+.|+|++++++.+.+++.+.+.. .....|++..|.++||+++++|+.+ ++.++++ +|++|+|+++
T Consensus 29 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~ 104 (385)
T PRK09276 29 RGVDVISLGIGDPDLPTPDHIIEAMCKAVED----PENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred cCCCEEEecCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 3456899999999988888999999888753 2346798889999999999999985 5556776 5999999999
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEE
Q 045431 138 DISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFF 211 (433)
Q Consensus 138 al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l 211 (433)
++.+ +..++++||+|++++|+|+.+...++..| .+++.++.+.+.++..+++. ..++++|++
T Consensus 105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l 172 (385)
T PRK09276 105 GIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAG------------GEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFI 172 (385)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcC------------CEEEEEecCCCCCCcCCHHHHHHhccccceEEEE
Confidence 9997 57778999999999999999999999888 47888888765555444322 357899999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
+|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. +.++.+++...+++|+++||||.+|++|+|+||++
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i 252 (385)
T PRK09276 173 NYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAV 252 (385)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeee
Confidence 99999999999999999999999999999999999999887653 45666665445678999999999999999999999
Q ss_pred ccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCcc
Q 045431 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAP 370 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~ 370 (433)
++++++ +.+.+.......+.+.+.|.++..++.+ ...+++++++.++++++.+.+.|++.|+.+..+.+|+
T Consensus 253 ~~~~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 323 (385)
T PRK09276 253 GNADLI--------AGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATF 323 (385)
T ss_pred CCHHHH--------HHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcce
Confidence 998885 6666655545555777899988888874 3568899999999999999999999898888888899
Q ss_pred EEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHH
Q 045431 371 YVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 371 ~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
|+|++++ +.++.++...+++++||.+.||..|+..+++++||+++.+++++++++++|++
T Consensus 324 ~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 324 YVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 9999998 45677788888877799999999997666789999998889999999999975
No 18
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-52 Score=402.17 Aligned_cols=345 Identities=25% Similarity=0.396 Sum_probs=291.5
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~a 138 (433)
.++++|+|+.|+|++++|+.+.+++.+.+.. ....|++..|.++||+++|+|+.+ ++++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 104 (387)
T PRK08960 30 AGHDVIHLEIGEPDFTTAEPIVAAGQAALAA-----GHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGA 104 (387)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----CCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHH
Confidence 3457899999999988899999999998863 235798899999999999999975 677899999999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.+ +..++.+||+|++++|+|+.+...+...| .+++.++++.++++..+++. .+++++++++
T Consensus 105 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 172 (387)
T PRK08960 105 LLLASSLLVDPGKHWLLADPGYPCNRHFLRLVE------------GAAQLVPVGPDSRYQLTPALVERHWNADTVGALVA 172 (387)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcC------------CeEEEEecCcccCCCCCHHHHHHHhCccceEEEEE
Confidence 997 57778999999999999999999998888 47778888665554444332 2467888999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
+||||||.++|.+++++|+++|++||++||+||+|.++.+++.+.++... ++++++++||||.+|++|+|+||++++
T Consensus 173 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~g~~GlRiG~~~~~ 249 (387)
T PRK08960 173 SPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEV---DDDAFVLNSFSKYFGMTGWRLGWLVAP 249 (387)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhc---cCCEEEEeecccccCCcccEEEEEEcC
Confidence 99999999999999999999999999999999999998776544454443 458999999999999999999999999
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCee-ecCCCccE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKV-YGGKNAPY 371 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~g~~ 371 (433)
++++ +.+.+.......+++.+.|.++.+++.+....++++.++.++++++.+.+.|+++|+.+ ..|.+|+|
T Consensus 250 ~~~~--------~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f 321 (387)
T PRK08960 250 PAAV--------PELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFY 321 (387)
T ss_pred HHHH--------HHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEE
Confidence 8885 66766666556668999999999998754447889999999999999999999988765 45778999
Q ss_pred EEEECCC--CChHHHHHHHHHcCCeEecCCCCCCCC-CCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 372 VWVQFPG--RSSWDVFSEILEKTHVVTTPGSGFGPG-GEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 372 ~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~-~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+|++++. .++.++...+++++||.+.||+.|+.. ..+++||++..+.+++++++++|+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 322 LYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999984 466777778887789999999999753 3579999998889999999999998763
No 19
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-52 Score=399.19 Aligned_cols=359 Identities=28% Similarity=0.415 Sum_probs=294.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--
Q 045431 43 GYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-- 120 (433)
Q Consensus 43 g~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-- 120 (433)
.|.+..+...........++.++|+|+.|+|++.+++.+++++.+.+.. .....|+ ..|.++||+++|+|+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~----~~~~~Y~-~~G~~~lr~aia~~~~~~~ 98 (410)
T PRK06290 24 IYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKK----PENRGYA-DNGIQEFKEAAARYMEKVF 98 (410)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCC-CCCcHHHHHHHHHHHHHHc
Confidence 4555444433333333345667999999999988889999988887643 2345686 48999999999999975
Q ss_pred cCC-CCCC-cEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcc
Q 045431 121 DLG-IEEG-DIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFF 197 (433)
Q Consensus 121 ~~~-~~~~-~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (433)
++. ++++ +|++|+|+++++.+ +..++++||.|++++|+|+.+...++..| .+++.++.+.++++.
T Consensus 99 g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~ 166 (410)
T PRK06290 99 GVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYG------------GEVYNLPLLEENNFL 166 (410)
T ss_pred CCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcC------------CEEEEEecCCCcCCc
Confidence 565 7776 79999999999987 57788999999999999999999999998 588899987666665
Q ss_pred cCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEE
Q 045431 198 PDLST-----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIET 272 (433)
Q Consensus 198 ~~~~~-----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i 272 (433)
.+++. ..++++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++.+.++.+++...+++|++
T Consensus 167 ~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i 246 (410)
T PRK06290 167 PDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEI 246 (410)
T ss_pred CCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEE
Confidence 55432 2478999999999999999999999999999999999999999999988765555666665445678999
Q ss_pred ecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHH
Q 045431 273 SSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDII 352 (433)
Q Consensus 273 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 352 (433)
+||||.+|++|+|+||++++++++ +.+.+.......+++.++|.++..++++. .++++.++.++++++.+
T Consensus 247 ~SfSK~~g~~GlRiG~ii~~~~l~--------~~l~~~~~~~~~~~~~~~q~aa~~~l~~~--~~~~~~~~~~~~~~~~l 316 (410)
T PRK06290 247 HSLSKAYNMTGWRLAFVVGNELIV--------KAFATVKDNNDSGQFIAIQKAGIYALDHP--EITEKIREKYSRRLDKL 316 (410)
T ss_pred eechhhcCCchhheEeEEeCHHHH--------HHHHHHHhccccCCcHHHHHHHHHHhhCc--HHHHHHHHHHHHHHHHH
Confidence 999999999999999999998885 66776665556666789999999999753 56788999999999999
Q ss_pred HHHHhhcCCeeecCCCccEEEEECCC--------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec---cChhHH
Q 045431 353 VETFNSLGFKVYGGKNAPYVWVQFPG--------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF---GHRGNV 421 (433)
Q Consensus 353 ~~~l~~~g~~~~~~~~g~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~l 421 (433)
.+.|+++|+.+.+|.+|+|+|++++. .++.++.+.|+++.++.+.||..|+ +++||+++ .++++.
T Consensus 317 ~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~ 392 (410)
T PRK06290 317 VKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEE 392 (410)
T ss_pred HHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccch
Confidence 99999999988888899999999984 2567888888888788888987653 68999986 378888
Q ss_pred HHHHHHHHHhh
Q 045431 422 LEACKRFKHLY 432 (433)
Q Consensus 422 ~~~l~~l~~~l 432 (433)
++.+++|++.|
T Consensus 393 ~~~~~~l~~~~ 403 (410)
T PRK06290 393 DRILEEIKRRL 403 (410)
T ss_pred hHHHHHHHHHH
Confidence 88888888765
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=6.8e-52 Score=401.10 Aligned_cols=343 Identities=24% Similarity=0.410 Sum_probs=285.4
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCC-CCCC-cEEEcCChH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLG-IEEG-DIFVSDGAK 136 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~-~~~~-~i~~~~G~~ 136 (433)
.+.++|+|+.|+|++++|+.+.+++.+.+. ....|++..|.++||+++|+|+.+ ++. ++++ +|++|+|++
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~ 100 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLD------GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSR 100 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhh------hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChH
Confidence 466899999999998889999999888663 346798899999999999999975 666 7775 999999999
Q ss_pred HHHHH-HHHhcCC---CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCcc
Q 045431 137 CDISR-LQIVFGS---NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTD 207 (433)
Q Consensus 137 ~al~~-l~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 207 (433)
+++.+ +..++++ ||.|++++|+|+.+...++..| .+++.+|.+.++++..+++. .++++
T Consensus 101 ~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k 168 (396)
T PRK09147 101 EALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAG------------AEPYFLNCDPANNFAPDFDAVPAEVWARTQ 168 (396)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcC------------CEEEEeccCccccCccCHHHHHHHHhhccE
Confidence 99997 5778899 8999999999999999999998 58889998766555555432 25789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCccc-c---cC-CCCcceEEEeccccccc
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN--PRSIF-E---IP-GAKEVAIETSSFSKYAG 280 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~-~---~~-~~~~~vi~i~S~sK~~~ 280 (433)
++++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.+.. . .+ ...+++|+++||||.++
T Consensus 169 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 248 (396)
T PRK09147 169 LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN 248 (396)
T ss_pred EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccC
Confidence 999999999999999999999999999999999999999999887652 22211 1 11 12468999999999999
Q ss_pred ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG 360 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 360 (433)
++|+|+||++++++++ +.+.+.......+++.+.|.++.+.+.. ..++++.++.++++++.+.+.|++.
T Consensus 249 ~~GlRiG~~~~~~~l~--------~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 249 VPGLRSGFVAGDAALL--------KKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred CccceeeeecCCHHHH--------HHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9999999999998885 6666555544556788999988887753 3578899999999999999999885
Q ss_pred CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 361 FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+.+..|.+|+|+|++++ .++.++...+++++||.+.||..|+. .+.+++||+++.+++++++++++|+++++
T Consensus 318 ~~~~~p~~g~f~~~~~~-~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 318 LDVQLPDAGFYLWAKVP-GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred cCCCCCCeeEEEEEECC-CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 66667889999999998 45677888888778999999998863 23679999998889999999999998763
No 21
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-52 Score=399.87 Aligned_cols=346 Identities=28% Similarity=0.467 Sum_probs=289.3
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~ 137 (433)
.+.++|+|+.|.|+.++|+.+++++.+.+.. .....|+++.|.++||+++|+|+.+ ++.++++ +|++|+|+++
T Consensus 33 ~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 33 QGLDLIDLGMGNPDGAAPQPVIEAAIAALAD----PQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 3456899999998877778888888777653 3346898899999999999999975 5667787 5999999999
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEE
Q 045431 138 DISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFF 211 (433)
Q Consensus 138 al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l 211 (433)
++.+ +..++++||+|++++|+|+.+...+...| .+++.++.+.++++..+++. .+++++|++
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 176 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAG------------AQIYPIILKPENDWLIDLSSIPEEVAQQAKILYF 176 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcC------------CEEEEeecCCccCCccCHHHHHHhccccceEEEE
Confidence 9997 57788999999999999999988888888 47888888755554444321 258899999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
+|||||||.++|.+++++|+++|++|+++||+||+|.++.+++. +.++.++++..+++|+++||||.||++|+|+||++
T Consensus 177 ~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~ 256 (394)
T PRK05942 177 NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV 256 (394)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeee
Confidence 99999999999999999999999999999999999999887653 45565665445678999999999999999999999
Q ss_pred ccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCcc
Q 045431 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAP 370 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~ 370 (433)
++++++ +.+.........+.+.++|.++..+++. ..+++++.+++++++++.+.+.|++.|+.+..+.+|+
T Consensus 257 ~~~~l~--------~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~ 327 (394)
T PRK05942 257 GNRHII--------QGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATM 327 (394)
T ss_pred cCHHHH--------HHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeee
Confidence 998875 6676665554556788999999988863 3467899999999999999999998888888888899
Q ss_pred EEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 371 YVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 371 ~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
|+|++++ +.++.++..++++++||.+.||+.|+..+.+++|+++..+.+.+.+++++|.++
T Consensus 328 f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 328 YLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 9999998 446677777788888999999999976667899999987889999999999764
No 22
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=4.4e-52 Score=405.16 Aligned_cols=352 Identities=20% Similarity=0.238 Sum_probs=279.4
Q ss_pred CCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChH
Q 045431 62 DAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAK 136 (433)
Q Consensus 62 ~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~ 136 (433)
+.++++++.|+| ++++|+.+.+++.+.+.. ....+|++..|.++||+++|+|+++ ++.+++++|++|+|++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~----~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~ 106 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMD----DKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLG 106 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHH
Confidence 456899999999 678999999998887753 3456899999999999999999985 6778999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCChhhhhhH-HHhCCcccccccccccceEEEeecCccCCcccCCCC-------CCCccE
Q 045431 137 CDISRLQIVFGSNVTMAVQDPSYPAYVDSS-VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-------VARTDI 208 (433)
Q Consensus 137 ~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 208 (433)
+++.++..++.+||.|++++|+|+.+.... ...| ..++.++.++++++..+++. .+++++
T Consensus 107 ~al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g------------~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 107 DAIAKIYGLLRREARVIGPSPAYSTHSSAEAAHAG------------YPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred HHHHHHHHhcCCCCeEEEeCCCCchHHHHHHHhcC------------CeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 999986568899999999999999876442 2335 36777787655555444332 146789
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEeccccccccccccee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
++++|||||||.++|.+++++|+++|++||++||+||+|.++.+++. +.++.++.. ..++|+++||||++++||+|+|
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEE
Confidence 99999999999999999999999999999999999999999988654 456666632 2357999999999988999999
Q ss_pred eeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhc-CCeeec
Q 045431 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSL-GFKVYG 365 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 365 (433)
|+++++........+....+..... ...+++.+.|.++.+++.+... ++++++++.++++++.+.+.|++. |+.+..
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~ 332 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNR 332 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccC
Confidence 9998531100000001122222222 2335788999999999986543 689999999999999999999887 788888
Q ss_pred CCCccEEEEECCCC----------------------------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-
Q 045431 366 GKNAPYVWVQFPGR----------------------------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG- 416 (433)
Q Consensus 366 ~~~g~~~~~~~~~~----------------------------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~- 416 (433)
|.+|+|+|+++++. ++.++...+++++||.+.||+.|+... .++||+|+.
T Consensus 333 p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~-~~~Rls~~~~ 411 (433)
T PRK06855 333 TNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTEL-NGFRVTLLER 411 (433)
T ss_pred CCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCC-CceEEEECCC
Confidence 88999999999842 255667777888899999999997543 459999975
Q ss_pred ChhHHHHHHHHHHHhh
Q 045431 417 HRGNVLEACKRFKHLY 432 (433)
Q Consensus 417 ~~~~l~~~l~~l~~~l 432 (433)
+.++|++++++|++++
T Consensus 412 ~~~~i~~~~~~l~~~~ 427 (433)
T PRK06855 412 DEEKFEWIYQTLAEKI 427 (433)
T ss_pred cHHHHHHHHHHHHHHH
Confidence 8999999999999876
No 23
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-51 Score=393.97 Aligned_cols=337 Identities=22% Similarity=0.346 Sum_probs=277.3
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al 139 (433)
+.++|+|+.|+|++++|+.+.+++.+.. .....|+++.|.++||+++|+|+++ ++++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~------~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al 96 (374)
T PRK05839 23 EYKGLDLTIGEPQFETPKFIQDALKNNA------HLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL 96 (374)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHh------hccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 5589999999999888888888887754 2356798899999999999999975 6668999999999999999
Q ss_pred HHH-HHhc--CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCC
Q 045431 140 SRL-QIVF--GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSP 214 (433)
Q Consensus 140 ~~l-~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p 214 (433)
..+ ..++ .+||.|++++|+|+.+...++..| .+++.++.+.++++..++.. ..++++++++||
T Consensus 97 ~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~d~~~~~~~~~k~v~i~nP 164 (374)
T PRK05839 97 FNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASR------------AKVLLMPLTKENDFTPSLNEKELQEVDLVILNSP 164 (374)
T ss_pred HHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcC------------CEEEEeecccccCCcCCcchhhhccccEEEEeCC
Confidence 875 4443 579999999999999999999888 58889998766666666432 357899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc-----CCCCcceEEEecccccccccccceeee
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI-----PGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
|||||.++|.+++++|+++|++||++||+||+|.++.+++...++... ....+++|+++||||.|++||+|+||+
T Consensus 165 ~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~i 244 (374)
T PRK05839 165 NNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFI 244 (374)
T ss_pred CCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEE
Confidence 999999999999999999999999999999999997654433333321 112368999999999999999999999
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCc
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNA 369 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g 369 (433)
+++++++ +.+.+.........+.+.|.++..++.+ ..++++.++.++++++.+.+.| ++. .|.+|
T Consensus 245 i~~~~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg 309 (374)
T PRK05839 245 AGDASIL--------KKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT--IPPAT 309 (374)
T ss_pred ecCHHHH--------HHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC--CCCee
Confidence 9988775 6666655444456788899988877764 3577888999999999888766 343 56799
Q ss_pred cEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCC--CCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 370 PYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPG--GEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~--~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+|+|++++ +..++..++++++||.+.||..|+.. +++++||++..+++++++++++|+++++
T Consensus 310 ~fi~~~~~--~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 310 FYVWLPVD--NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred EEEEEeCC--ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 99999997 35678888877679999999988643 3689999998789999999999998874
No 24
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.8e-51 Score=397.17 Aligned_cols=352 Identities=17% Similarity=0.255 Sum_probs=283.6
Q ss_pred cCCCCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEc
Q 045431 59 KYPDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVS 132 (433)
Q Consensus 59 ~~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~ 132 (433)
...++++|+|+.|+|+ +++|+.+.+++.+++.. .....|++..|.++||+++|+|+.+ ++++++++|++|
T Consensus 28 ~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it 103 (409)
T PLN00143 28 EDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS----AKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLT 103 (409)
T ss_pred cCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC----cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEe
Confidence 4456789999999998 89999999999998764 3456799999999999999999975 667899999999
Q ss_pred CChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCc
Q 045431 133 DGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VART 206 (433)
Q Consensus 133 ~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 206 (433)
+|+++++.+ +..++++||.|++++|+|+.+...++..| .+++.++.++++++..+++. ..++
T Consensus 104 ~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 171 (409)
T PLN00143 104 LGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHH------------LEIRHFDLLPEKGWEVDLDAVEAIADENT 171 (409)
T ss_pred cChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcC------------CEEEEEeccCCCCCcCCHHHHHHhcccCC
Confidence 999999997 57788999999999999999999999888 47777877544455444332 2568
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC-CcccccCCCCcceEEEecccccccccccc
Q 045431 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVR 285 (433)
Q Consensus 207 ~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r 285 (433)
++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++.+ .++..++. .+++|+++||||.|++||+|
T Consensus 172 ~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlR 250 (409)
T PLN00143 172 IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFAS-IVPVITLGSISKRWMIPGWG 250 (409)
T ss_pred EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcc-cCcEEEEccchhhcCCCccc
Confidence 88999999999999999999999999999999999999999999887542 44444433 45799999999999999999
Q ss_pred eeeeecc-c-cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCC-e
Q 045431 286 LGWTVIP-K-ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF-K 362 (433)
Q Consensus 286 ~G~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~ 362 (433)
+||++++ + .++. .....+.+.+.... ...++.++|.++.+++.+....++++.++.++++++.+.+.|++++. .
T Consensus 251 vG~~v~~~p~~~~~--~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 327 (409)
T PLN00143 251 LGWLVTCDPSGLLQ--ICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIM 327 (409)
T ss_pred eEEEEeeCchhhhh--hHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999984 3 3320 00011223333222 22357899999999997554567888999999999999999988743 3
Q ss_pred -eecCCCccEEEEECCC------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 363 -VYGGKNAPYVWVQFPG------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 363 -~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+..|.+|+|+|++++. .++.+++..+++++||.+.||..|+ .++++||+++.+.+++++++++|++++
T Consensus 328 ~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~--~~~~iRi~~~~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 328 CPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG--LKNWLRITFAVEQSSLEDGLGRLKSFC 402 (409)
T ss_pred CCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2357799999999973 2466777788788899999999995 368999999888999999999999876
No 25
>PLN02187 rooty/superroot1
Probab=100.00 E-value=2.4e-51 Score=401.33 Aligned_cols=350 Identities=19% Similarity=0.264 Sum_probs=283.1
Q ss_pred CCCCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcC
Q 045431 60 YPDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSD 133 (433)
Q Consensus 60 ~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~ 133 (433)
.++.++|+|+.|+|+ +.+|+.+.+++.+.+.. .....|++..|.++||+++|+|+.+ ++++++++|++|+
T Consensus 63 ~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 63 DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS----GKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 446789999999987 55678889999888764 2345798999999999999999975 6678999999999
Q ss_pred ChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCcc
Q 045431 134 GAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTD 207 (433)
Q Consensus 134 G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 207 (433)
|+++++.+ +..+++|||+|++++|+|+.|...+...| .+++.++..+++++..+++. ..+++
T Consensus 139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g------------~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~ 206 (462)
T PLN02187 139 GCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSG------------LEVRKFDLLPEKEWEIDLEGIEAIADENTV 206 (462)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcC------------CEEEEEeCccccCCccCHHHHHHhcCCCcE
Confidence 99999997 57788999999999999999998888888 47777777544445444332 25688
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccce
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..++. ..++|+++||||+|++||+|+
T Consensus 207 ~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRi 285 (462)
T PLN02187 207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWKI 285 (462)
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCcccee
Confidence 999999999999999999999999999999999999999999888654 345656543 246999999999999999999
Q ss_pred eeeeccc-cccccCCcchhHHHHHHHhhccC--CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCC-e
Q 045431 287 GWTVIPK-ELLFSDGFPVAKDFNRIVCTCFN--GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF-K 362 (433)
Q Consensus 287 G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~ 362 (433)
||+++++ +.+. ...+.+......... +++.+.|.++.++|++....++++.++.++++++.+.+.|++++. .
T Consensus 286 G~~v~~~p~~~~----~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~ 361 (462)
T PLN02187 286 GWIALNDPEGVF----ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVV 361 (462)
T ss_pred EEEEecCchhHH----HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 9999853 2110 001344444433322 358899999999997544578999999999999999999998743 2
Q ss_pred -eecCCCccEEEEECCC-----C-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 363 -VYGGKNAPYVWVQFPG-----R-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 363 -~~~~~~g~~~~~~~~~-----~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+..|.+|+|+|++++. . ++.+++..+++++||.+.||..|+ .+++|||+++.+++++++++++|.+++
T Consensus 362 ~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~~~~e~l~~al~rL~~~l 436 (462)
T PLN02187 362 CPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIGVEAHMLEDALERLKGFC 436 (462)
T ss_pred CCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 3357789999998752 1 355777788888899999999996 368999999889999999999999876
No 26
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=4.1e-51 Score=393.98 Aligned_cols=343 Identities=25% Similarity=0.390 Sum_probs=290.5
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al 139 (433)
+++|+|+.|.|++++++.+.+++.+.+. .....|++..|.++||+++|+|+.+ +++++++ +|++|+|+++++
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al 102 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIT-----ENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAI 102 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 4689999999988888889999999876 2346898889999999999999974 6677888 999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCC---CC--CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---ST--VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~i~l~~ 213 (433)
.+ +..++++||.|++++|+|+.+...++..| .+++.++.+.+ ++..+. +. .++++++++++
T Consensus 103 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~i~i~~ 169 (387)
T PRK07683 103 DIAFRTILEPGTEVILPAPIYPGYEPIIRLCG------------AKPVFIDTRST-GFRLTAEALENAITEKTRCVVLPY 169 (387)
T ss_pred HHHHHHhCCCCCEEEEcCCCccchHHHHHHcC------------CEEEEeecCcc-cCCCCHHHHHHhcCcCceEEEEeC
Confidence 97 56778999999999999999999999888 47888887643 444332 11 25789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
||||||.+++.+++++|+++|+++|++||+||+|+++.+++.+.++.++.+.++++++++||||.+|+||+|+||+++++
T Consensus 170 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~ 249 (387)
T PRK07683 170 PSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS 249 (387)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH
Confidence 99999999999999999999999999999999999988776555666664446789999999999999999999999998
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+++ +.+.........+++.++|.++.+++.+ +..++++.++.++++++.+.+.|++.|+.+..+.+|+|+|
T Consensus 250 ~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 320 (387)
T PRK07683 250 YLA--------KHILKVHQYNVTCASSISQYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLF 320 (387)
T ss_pred HHH--------HHHHHHHHhccCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEE
Confidence 875 5565554444455678899999888874 3457888999999999999999999888888888999999
Q ss_pred EECCC--CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 374 VQFPG--RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 374 ~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+.+++ .++.+++..+++++||.+.||..|+..+++++||+++.+++++++++++|.+++
T Consensus 321 ~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l 381 (387)
T PRK07683 321 PSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL 381 (387)
T ss_pred EecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 99874 456677778788889999999999866678999999889999999999999876
No 27
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=5.6e-51 Score=393.86 Aligned_cols=345 Identities=29% Similarity=0.471 Sum_probs=288.6
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~a 138 (433)
.++++|+|+.|.|++++|+.+.+++.+.+. .....|++..|.++||+++|+|+.+ ++.+++++|++|+|++++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~a 102 (388)
T PRK07337 28 AGRDIIHMGIGEPDFTAPEPVVEAAARALR-----RGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAA 102 (388)
T ss_pred cCCCEEEeCCcCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHH
Confidence 345789999999998888888999888775 2346798888999999999999975 667789999999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.+ +..++++||+|++++|+|+.+...++..| .+++.++.+.++++..+++. .+++++|+++
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 170 (388)
T PRK07337 103 LLLACLALVERGDEVLMPDPSYPCNRHFVAAAE------------GRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLA 170 (388)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEeecCCccCCcCCHHHHHhhcCccceEEEEE
Confidence 997 57788999999999999999998888888 47788888654444444332 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
+||||||.+++.+++++|+++|+++++++|+||+|.++.+++.+.+...+ .+++|+++||||.+|++|+|+||++++
T Consensus 171 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~G~RiG~~~~~ 247 (388)
T PRK07337 171 SPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL---GDDVITINSFSKYFNMTGWRLGWLVVP 247 (388)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhc---cCCEEEEEechhhcCCchhheeeeecC
Confidence 99999999999999999999999999999999999988776544444333 457899999999999999999999999
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCee-ecCCCccE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKV-YGGKNAPY 371 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~g~~ 371 (433)
++++ +.+.........+.+.+.|.++..++.+....++++.++.++++++.+.+.|++.|+.+ ..|.+|+|
T Consensus 248 ~~l~--------~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f 319 (388)
T PRK07337 248 EALV--------GTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFY 319 (388)
T ss_pred HHHH--------HHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEE
Confidence 8875 66766665555567899999999998755555668889999999999999999987764 46789999
Q ss_pred EEEECCC------CChHHHHHHHHHcCCeEecCCCCCCC-CCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 372 VWVQFPG------RSSWDVFSEILEKTHVVTTPGSGFGP-GGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 372 ~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+|++++. .++.++...+++++||.+.||..|+. .+.+++||+++.+++++++++++|++++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l~ 388 (388)
T PRK07337 320 VYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLFG 388 (388)
T ss_pred EEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHhC
Confidence 9999974 35667777888888999999999974 34689999998889999999999998763
No 28
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=4.9e-51 Score=393.06 Aligned_cols=340 Identities=20% Similarity=0.315 Sum_probs=283.9
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCC-CcEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEE-GDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~-~~i~~~~G~~~al 139 (433)
.++|+|+.|+|++++++.+.+++.+.+.. ....|+++.|.++||+++++++++ +..+++ ++|++|+|+++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRD-----GHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHh-----CCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 35899999999988899999998887652 346799999999999999999976 444444 6899999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~i~l~~ 213 (433)
.+ +..++.+||+|++++|+|..+...++.+| .+++.++.+.+ ++..+++ + .+++++|+++|
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~i~~ 170 (384)
T PRK12414 104 YAAISALVHPGDEVIYFEPSFDSYAPIVRLQG------------ATPVAIKLSPE-DFRVNWDEVAAAITPRTRMIIVNT 170 (384)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHcC------------CEEEEEecCcc-ccccCHHHHHhhcCcccEEEEEcC
Confidence 87 67889999999999999999999988888 47778887643 2333322 1 25789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ..++.+++...+++|+++||||.+|+||+|+||++++
T Consensus 171 p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~ 250 (384)
T PRK12414 171 PHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP 250 (384)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC
Confidence 999999999999999999999999999999999999888753 3355555444568999999999999999999999999
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++++ +.+.+.......+++.+.|.++.++|++.. +..+.++.++++++.+.+.|+++|+.+.++.+|+|+
T Consensus 251 ~~l~--------~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~ 320 (384)
T PRK12414 251 AELM--------DEIRKVHQFMVFSADTPMQHAFAEALAEPA--SYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFM 320 (384)
T ss_pred HHHH--------HHHHHHHhheecCCCcHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEE
Confidence 9885 667776665666789999999999997533 234678899999999999999999888888899999
Q ss_pred EEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCC--CCeEEEeeccChhHHHHHHHHHHH
Q 045431 373 WVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGG--EGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 373 ~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~--~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
|+++++ ..+.+++..+++++||.+.||+.|+..+ .+++||+++.+++++++++++|.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 321 LARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred EEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 999863 3566777777888899999999996433 579999998889999999999976
No 29
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.7e-51 Score=394.92 Aligned_cols=347 Identities=27% Similarity=0.463 Sum_probs=292.0
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~a 138 (433)
+.++++|+.|.|+.+.|+.+++++.+.+.. .....|+++.|.++||+++++|+.+ ++.++++ +|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQR----PDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC----CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 457899999999877788888888877653 3456899999999999999999975 6777776 89999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.+ +..+++|||+|++++|+|+.+...++..| .+++.++.+.++++..++++ .+++++++++
T Consensus 104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~ 171 (395)
T PRK08175 104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAG------------AQVRSVPLVEGVDFFNELERAIRESYPKPKMMILG 171 (395)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcC------------CeEEEEecccCCCcHHHHHHHHhhccCCceEEEEe
Confidence 987 57788999999999999999988888888 47888888766555444432 2478999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
+||||||.+++.+++++|+++|++||++||+||+|.++.+++. +.++.++++..+++++++||||.+|+||+|+||+++
T Consensus 172 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 172 FPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC
Confidence 9999999999999999999999999999999999999887653 455555554456789999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
+++++ +.+.+.......+++.+.|.++..++.+ ...+++++++.++++++.+.+.|+++|+.+..|.+|+|
T Consensus 252 ~~~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~ 322 (395)
T PRK08175 252 NPELV--------SALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMY 322 (395)
T ss_pred CHHHH--------HHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEE
Confidence 98885 6666666555566778889988888864 35688999999999999999999999988877889999
Q ss_pred EEEECCCC----ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 372 VWVQFPGR----SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 372 ~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+|++++.. ++.+++..+++++||.+.||..|+..+++++||++..+.+.+++++++|+++++
T Consensus 323 i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 323 VWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred EEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 99999842 356777788877899999999997666789999998789999999999998763
No 30
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.9e-51 Score=395.69 Aligned_cols=349 Identities=20% Similarity=0.305 Sum_probs=284.9
Q ss_pred CCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCCh
Q 045431 62 DAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGA 135 (433)
Q Consensus 62 ~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~ 135 (433)
+.++|+|+.|+|+ +++|+.+.+++.+++.. .....|++..|.++||+++++++.+ +..+++++|++|+|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRS----GKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGC 126 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHc----CcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCH
Confidence 5679999999995 67788999999988864 2345798889999999999999975 666789999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEE
Q 045431 136 KCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDII 209 (433)
Q Consensus 136 ~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i 209 (433)
++++.+ +..++++||+|++++|+|+.|.......| .+++.++..++.++..+++. .++++++
T Consensus 127 ~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 194 (430)
T PLN00145 127 AQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSG------------LEVRHFDLLPERGWEVDLEGVEALADENTVAM 194 (430)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcC------------CEEEEeeCCcccCCcCCHHHHHHHhCcCceEE
Confidence 999998 57778999999999999999988888888 47777776555555555432 3578999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceee
Q 045431 210 FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 210 ~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++..++. .+++|+++||||.|++||||+||
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcc-cCcEEEEeccccccCCCCeeEEE
Confidence 9999999999999999999999999999999999999999888753 455555544 46899999999999999999999
Q ss_pred eecc--ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCee-e
Q 045431 289 TVIP--KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKV-Y 364 (433)
Q Consensus 289 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~-~ 364 (433)
++++ +.++. ..++...+.... .....++.+.|.++..+|++....++++.++.++++++.+.+.|+++ |+.+ .
T Consensus 274 iv~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~ 350 (430)
T PLN00145 274 IATCDPNGILK--ETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH 350 (430)
T ss_pred EEEecchhhhh--hhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 9973 33321 001112333332 22334678999999999985445788999999999999999999987 7775 4
Q ss_pred cCCCccEEEEECCC------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 365 GGKNAPYVWVQFPG------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 365 ~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.|++|+|+|++++. .++.++...+++++||.+.||..|+. ++++||+++.+.+++++++++|++++
T Consensus 351 ~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~~~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 351 KPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFAIDPPSLEDGLERLKSFC 422 (430)
T ss_pred CCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 68899999999862 24567888888888999999999974 58999999888999999999999876
No 31
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.6e-51 Score=393.82 Aligned_cols=342 Identities=25% Similarity=0.443 Sum_probs=282.4
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCC--CCCC-cEEEcCCh
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLG--IEEG-DIFVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~--~~~~-~i~~~~G~ 135 (433)
.+.++|+|+.|+|++++|+.+.+++.+.+. ....|+++.|.++||+++|+|+.+ +++ ++++ +|++|+|+
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLH------GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhh------ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 456799999999999889999999988653 346798899999999999999975 443 6774 89999999
Q ss_pred HHHHHH-HHHhcCCCCE--EEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCcc
Q 045431 136 KCDISR-LQIVFGSNVT--MAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTD 207 (433)
Q Consensus 136 ~~al~~-l~~l~~~gd~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 207 (433)
++++.+ +..+++|||. |++++|+|+.+...++..| .+++.++.+.++++..+++. ..+++
T Consensus 100 ~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k 167 (393)
T TIGR03538 100 REALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAG------------AEPYFLNCTAENGFLPDFDAVPESVWRRCQ 167 (393)
T ss_pred HHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcC------------CeEEEeeccccCCCCCCHHHHHHHHhhcce
Confidence 999997 5778899986 9999999999999988888 48888888766566555322 24789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCccc-c---cC-CCCcceEEEeccccccc
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD--NPRSIF-E---IP-GAKEVAIETSSFSKYAG 280 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~--~~~~~~-~---~~-~~~~~vi~i~S~sK~~~ 280 (433)
+|+++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++ .+.+.. . .. ...+++|+++||||.++
T Consensus 168 ~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 168 LLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 99999999999999999999999999999999999999999987764 222222 1 11 12468999999999998
Q ss_pred ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG 360 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 360 (433)
++|+|+||++++++++ +.+.+.......+++.+.|.++.+.+.. .+++++.++.++++++.+.+.|+++
T Consensus 248 ~~GlRvG~~i~~~~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 248 LPGLRSGFVAGDAEIL--------KAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred CcccceEEEecCHHHH--------HHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 9999999999998885 6666655544556788999988888753 3678899999999999999999876
Q ss_pred CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 361 FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 361 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+.+..|.+|+|+|++++ .++.++...+++++||.+.||+.|+. .+.+++||+++.+++++++++++|++++
T Consensus 317 ~~~~~p~gg~f~~~~~~-~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~ 393 (393)
T TIGR03538 317 LDLELPDAGFYLWPKVP-GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393 (393)
T ss_pred CcccCCCeeEEEEEECC-CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHhC
Confidence 55567889999999998 45677777887778999999999852 2367999999889999999999998763
No 32
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-51 Score=363.26 Aligned_cols=364 Identities=25% Similarity=0.388 Sum_probs=313.5
Q ss_pred CCcHHHHHHHHHHHhcCCC----CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 045431 44 YLFPEIARRKAAHMLKYPD----AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY 119 (433)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~ 119 (433)
|.+.++..+..+...+|+. .+++.|.++++|++.||.+.+|+.+.+. .+.++|+ .+..++-++++.|.+
T Consensus 2 ~~F~~~~~r~~t~s~KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvd-----hGvfGY~--~~~~~~~~ai~~w~~ 74 (388)
T COG1168 2 YDFDTVIERLGTNSLKWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVD-----HGVFGYP--YGSDELYAAIAHWFK 74 (388)
T ss_pred CchhhhhhhcCCCceeccccCCCCCcceeeeecccCCCCHHHHHHHHHHHh-----cCCCCCC--CCCHHHHHHHHHHHH
Confidence 3445555555555555543 4799999999999999999999999997 6788994 688999999999998
Q ss_pred c--cCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecC-ccCC
Q 045431 120 K--DLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCT-AENG 195 (433)
Q Consensus 120 ~--~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 195 (433)
+ ++.++++-|++++|...++.+ +..+.+|||.|++..|.|+++....+..|+ +++..|+. +++.
T Consensus 75 ~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R------------~~i~~pL~~~~~~ 142 (388)
T COG1168 75 QRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGR------------KVIENPLVEDDGR 142 (388)
T ss_pred HhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCc------------EEEeccccccCCc
Confidence 5 778889999999999999997 789999999999999999999999999995 67777765 3344
Q ss_pred cccCCCC------CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-CCCcccccCC-CCc
Q 045431 196 FFPDLST------VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD-NPRSIFEIPG-AKE 267 (433)
Q Consensus 196 ~~~~~~~------~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~ 267 (433)
+..|++. ..++++.+|||||||||.+++.+++.+|.++|.+||++||+||+|+++++.+ .+.++.++.. ..+
T Consensus 143 y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~ 222 (388)
T COG1168 143 YEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFAD 222 (388)
T ss_pred EEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhc
Confidence 5445332 3567999999999999999999999999999999999999999999999988 4666665542 247
Q ss_pred ceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHH
Q 045431 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKE 347 (433)
Q Consensus 268 ~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 347 (433)
+.|++.|.||+|+++|+++++++.+++.+. .+.+.++......++|.++..|..++++ .+..|++++.+.++.
T Consensus 223 ~~it~~saSKtFNlaGL~~a~~Ii~n~~lr------~~~~~~l~~~~~~~~n~lg~~A~~aAY~-~G~~WLd~L~~yl~~ 295 (388)
T COG1168 223 NSITLTSASKTFNLAGLKCAYIIISNRELR------AKFLKRLKRNGLHGPSALGIIATEAAYN-QGEPWLDELLEYLKD 295 (388)
T ss_pred ceEEEeeccccccchhhhheeEEecCHHHH------HHHHHHHHHhcCCCCchHHHHHHHHHHH-hchHHHHHHHHHHHH
Confidence 899999999999999999999998887752 1334556666778899999999999998 566899999999999
Q ss_pred HHHHHHHHHhhc--CCeeecCCCccEEEEECC--CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHH
Q 045431 348 NTDIIVETFNSL--GFKVYGGKNAPYVWVQFP--GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLE 423 (433)
Q Consensus 348 ~~~~l~~~l~~~--g~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~ 423 (433)
+++++.+.|.++ ++.+..|++++.+|+++. +.++.++...++++.+|.+.+|..||..+++++|++++.+.+.+++
T Consensus 296 N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~e 375 (388)
T COG1168 296 NRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEE 375 (388)
T ss_pred HHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHH
Confidence 999999999987 899999999999999998 5666788899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhC
Q 045431 424 ACKRFKHLYK 433 (433)
Q Consensus 424 ~l~~l~~~l~ 433 (433)
++++|+.+++
T Consensus 376 al~ri~~al~ 385 (388)
T COG1168 376 ALERLKRALK 385 (388)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 33
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=9.7e-51 Score=393.74 Aligned_cols=353 Identities=20% Similarity=0.286 Sum_probs=284.4
Q ss_pred CCCCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcC
Q 045431 60 YPDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSD 133 (433)
Q Consensus 60 ~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~ 133 (433)
..+.++|+|+.|+|+ +++|+.+.+++.+++.. .....|++..|.++||+++++|+.+ ++++++++|++|+
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~ 103 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQS----NKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITS 103 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 356689999999998 78899999999988863 3456899999999999999999975 6678899999999
Q ss_pred ChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCcc
Q 045431 134 GAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTD 207 (433)
Q Consensus 134 G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 207 (433)
|+++++.+ +..++++||+|++++|+|+.+.......| .+++.++.+++.++..+++. .++++
T Consensus 104 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~ 171 (409)
T PLN02656 104 GCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRH------------LEVRYVDLLPEKGWEVDLDAVEALADQNTV 171 (409)
T ss_pred ChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcC------------CEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence 99999997 57778999999999999999988888888 47888887654454444332 25688
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccce
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ..++..++. .+++|+++||||+|++||+|+
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRi 250 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGS-IVPVLTLGSLSKRWIVPGWRL 250 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcc-cCcEEEEcccchhccCcceeE
Confidence 999999999999999999999999999999999999999999988764 345555543 467999999999988999999
Q ss_pred eeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCe-ee
Q 045431 287 GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFK-VY 364 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~ 364 (433)
||+++++.-.....+.+.+.+...... ..+++.++|.++.+++++....++++.++.++++++.+.+.|+++ ++. +.
T Consensus 251 G~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 329 (409)
T PLN02656 251 GWFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPH 329 (409)
T ss_pred EEEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCc
Confidence 999985310000000113555544332 345789999999999985445678999999999999999999987 333 34
Q ss_pred cCCCccEEEEECCC-----C-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 365 GGKNAPYVWVQFPG-----R-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 365 ~~~~g~~~~~~~~~-----~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.|.+|+|+|++++. . ++.+++..+++++||.+.||+.|+. ++++||+++.+++++++++++|++++
T Consensus 330 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~--~~~iRi~~~~~~e~l~eal~rl~~~~ 401 (409)
T PLN02656 330 KPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGL--KNWLRITFAADPSSLEEALGRIKSFY 401 (409)
T ss_pred CCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 67899999999862 1 3446666777788999999999963 68999999889999999999999875
No 34
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-50 Score=391.48 Aligned_cols=344 Identities=20% Similarity=0.287 Sum_probs=286.4
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al 139 (433)
.++|+|+.|.|+.+.|+.+++++.+.+. .....|++..|.++||+++++++.+ ++.++++ +|++|+|+++++
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 100 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALL-----DGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL 100 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence 3689999999988888888888888764 2346799999999999999999975 6667888 999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~i~l~~ 213 (433)
.+ +..++++||+|++++|+|+.+...++..| .+++.++.+.+ ++..+++ + .+++++++++|
T Consensus 101 ~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~ 167 (387)
T PRK08912 101 AAALLALVEPGDEVVLFQPLYDAYLPLIRRAG------------GVPRLVRLEPP-HWRLPRAALAAAFSPRTKAVLLNN 167 (387)
T ss_pred HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEEecCcc-cCcCCHHHHHHHhCccceEEEEeC
Confidence 86 57788999999999999999999999888 47777877542 2222322 1 25788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ..++.++++..+++++++||||.+|++|+|+||++++
T Consensus 168 p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 247 (387)
T PRK08912 168 PLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA 247 (387)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC
Confidence 999999999999999999999999999999999999887653 4456666544578999999999999999999999999
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++++ +.+.+.......+.+...|.++..++.. ..+++++.++.++++++.+.+.|++.|+.+.++.+++|+
T Consensus 248 ~~~~--------~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l 318 (387)
T PRK08912 248 PPLL--------RVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFL 318 (387)
T ss_pred HHHH--------HHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEE
Confidence 8885 5666555444455677788888887763 346788999999999999999999999888888889999
Q ss_pred EEECCC----CChHHHHHHHHHcCCeEecCCCCCCC--CCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 373 WVQFPG----RSSWDVFSEILEKTHVVTTPGSGFGP--GGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 373 ~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
|++++. .++.++...+++++||.+.||..|+. ...+++||+++.+++++++++++|+++++
T Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 319 TVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARR 385 (387)
T ss_pred EecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 999974 35667888887778999999999853 34689999998889999999999998764
No 35
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.6e-51 Score=401.70 Aligned_cols=348 Identities=20% Similarity=0.300 Sum_probs=276.1
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcc-------cCCCCCCCCCCCCCHHHHHHHHHHHhc--c--CCCCCCcEEE
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALS-------TQEGYSGYGAEQGEKPLRAAIASTFYK--D--LGIEEGDIFV 131 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~-------~~~~~~~Y~~~~g~~~lr~~la~~l~~--~--~~~~~~~i~~ 131 (433)
..+|+|+.+++.++. +.+.+.+.+...... .......|++..|.++||++||+|+.+ + ..+++++|++
T Consensus 38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence 368999999986544 444444443221000 012344688889999999999999975 4 3368999999
Q ss_pred cCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHH-HhCCcccccccccccceEEEeecCccCCcccCCCC-------
Q 045431 132 SDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSV-IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST------- 202 (433)
Q Consensus 132 ~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 202 (433)
|+|+++++.+ +..+++|||.|++++|+|+.+...+. ..| .+++.++.+.++++..+++.
T Consensus 117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g------------~~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTG------------VEIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCC------------cEEEEEecCCccCCcCCHHHHHHHHHH
Confidence 9999999997 57788999999999999999988777 467 47888888655566554321
Q ss_pred ----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccC--------CCCcce
Q 045431 203 ----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIP--------GAKEVA 269 (433)
Q Consensus 203 ----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~--------~~~~~v 269 (433)
..++++|++||||||||.++|.+++++|+++|++|+++||+||+|+++.+++. +.++.+.. ...+++
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v 264 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV 264 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence 13789999999999999999999999999999999999999999999877653 33433321 124689
Q ss_pred EEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh--hHHHHHHHHHHH
Q 045431 270 IETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF--KAVHEVIGFYKE 347 (433)
Q Consensus 270 i~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~ 347 (433)
++++||||.+|++|+|+||++++++.+ .+.+.+.. ....++.++|.++..+|++..+ .++++.++.+++
T Consensus 265 i~l~S~SK~~~l~GlRiG~li~~~~~l-------~~~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~ 335 (468)
T PLN02450 265 HIVYSLSKDLGLPGFRVGAIYSNDEMV-------VSAATKMS--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQ 335 (468)
T ss_pred EEEEeccccCCCCCccEEEEEECCHHH-------HHHHHHHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999987653 24344332 2234789999999999987654 368889999999
Q ss_pred HHHHHHHHHhhcCCeeecCCCccEEEEECCCC-------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-Chh
Q 045431 348 NTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR-------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRG 419 (433)
Q Consensus 348 ~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~ 419 (433)
+++.+.+.|+++|+.+.++.+|+|+|++++.. ...++...+++++||.+.||+.|+..++++|||+|+. +++
T Consensus 336 rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~ 415 (468)
T PLN02450 336 RQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEE 415 (468)
T ss_pred HHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHH
Confidence 99999999999999888888999999999721 1245677778878999999999987678899999985 899
Q ss_pred HHHHHHHHHHHhh
Q 045431 420 NVLEACKRFKHLY 432 (433)
Q Consensus 420 ~l~~~l~~l~~~l 432 (433)
++++++++|++++
T Consensus 416 ~l~~~l~ri~~~l 428 (468)
T PLN02450 416 TLDLAMKRLKSFV 428 (468)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
No 36
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.3e-50 Score=390.71 Aligned_cols=342 Identities=22% Similarity=0.279 Sum_probs=288.3
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al 139 (433)
.++|+|+.|.|+++.++.+.+++.+.+.. ....|++..|.++||+++++++.+ +...+++ +|++|+|+++++
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAA-----GHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 46899999999988888889988887752 346798899999999999999986 4444554 899999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~ 213 (433)
.+ +..++.+||+|++++|+|+.+...++.+| .+++.++.+.+ ++..+++. .++++++++++
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~l~~ 171 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAG------------GRAVRVALQPP-DFRVDWQRFAAAISPRTRLIILNT 171 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcC------------CEEEEEecCcc-cccCCHHHHHHhcCccceEEEEeC
Confidence 87 57788999999999999999999999888 47888888643 33333221 35789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
||||||.+++.+++++|+++|++|++++|+||+|+++.+++. +.++.++++..+++++++||||.+|++|+|+||++++
T Consensus 172 p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~ 251 (386)
T PRK09082 172 PHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP 251 (386)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC
Confidence 999999999999999999999999999999999999888653 4566666555678999999999999999999999999
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++++ +.+.+........++.++|.++.+++.. ..++++++++.++++++.+.+.|++.|+.+.++.+|+|+
T Consensus 252 ~~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~ 322 (386)
T PRK09082 252 AALS--------AEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQ 322 (386)
T ss_pred HHHH--------HHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEE
Confidence 8885 6677666555566899999988888863 346788899999999999999999989998888899999
Q ss_pred EEECC---CCChHHHHHHHHHcCCeEecCCCCCC--CCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 373 WVQFP---GRSSWDVFSEILEKTHVVTTPGSGFG--PGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 373 ~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~--~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
|++++ +.++.++...+++++||.+.||+.|+ +.+.+++||+++.+++++++++++|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~~ 386 (386)
T PRK09082 323 LVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQL 386 (386)
T ss_pred EEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 99987 34577788888888899999999885 3356899999988999999999999864
No 37
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-50 Score=400.13 Aligned_cols=349 Identities=22% Similarity=0.356 Sum_probs=279.1
Q ss_pred CCCceEEecCCCCC----------------CCC-------------hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHH
Q 045431 61 PDAEVISLGIGDTT----------------EPI-------------PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLR 111 (433)
Q Consensus 61 ~~~~~i~l~~g~~~----------------~~~-------------~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr 111 (433)
++.++|+|+.|+|+ +.. |..+++++.+.+.... .....|++..|.++||
T Consensus 44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~LR 121 (481)
T PTZ00377 44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIG--GGTGAYTDSAGYPFVR 121 (481)
T ss_pred CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCC--CcccCcCcccCCHHHH
Confidence 56789999999995 655 4477888776665432 2456799999999999
Q ss_pred HHHHHHHhc--cCCCCCCcEEEcCChHHHHHHH-HHhc-CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEE
Q 045431 112 AAIASTFYK--DLGIEEGDIFVSDGAKCDISRL-QIVF-GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEY 187 (433)
Q Consensus 112 ~~la~~l~~--~~~~~~~~i~~~~G~~~al~~l-~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 187 (433)
++||+|+.+ ++.+++++|++|+|+++++.++ ..++ ++||.|++++|+|+.|...++.+| ..++.
T Consensus 122 ~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g------------~~~v~ 189 (481)
T PTZ00377 122 KAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLG------------GKQVP 189 (481)
T ss_pred HHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcC------------CEEEE
Confidence 999999985 7778999999999999999984 6777 799999999999999999999999 47888
Q ss_pred eecCccCCcccCCCC-----C------CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--
Q 045431 188 MRCTAENGFFPDLST-----V------ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD-- 254 (433)
Q Consensus 188 ~~~~~~~~~~~~~~~-----~------~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~-- 254 (433)
++.+.++++..+++. . .++++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++
T Consensus 190 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~ 269 (481)
T PTZ00377 190 YYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEK 269 (481)
T ss_pred EEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCC
Confidence 888766566555332 1 178999999999999999999999999999999999999999999988853
Q ss_pred CCCcccc----cCCC---CcceEEEeccccc-ccccccceeeeec---cccccccCCcchhHHHHHHHhhccCCCcHHHH
Q 045431 255 NPRSIFE----IPGA---KEVAIETSSFSKY-AGFTGVRLGWTVI---PKELLFSDGFPVAKDFNRIVCTCFNGASNISQ 323 (433)
Q Consensus 255 ~~~~~~~----~~~~---~~~vi~i~S~sK~-~~~~G~r~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 323 (433)
...++.. ++.. ..++|+++||||+ ++++|||+||+++ +++++ +.+.+... ...+++.++|
T Consensus 270 ~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li--------~~l~~~~~-~~~~~~~~~Q 340 (481)
T PTZ00377 270 PFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVR--------EQIYKLAS-INLCSNVVGQ 340 (481)
T ss_pred CcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHH--------HHHHHHhh-eecCCChHHH
Confidence 2334332 2211 1368999999997 5889999999986 77764 66666553 3445889999
Q ss_pred HHHHHhcCcC----C----h-hHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEECC--CC-----------C
Q 045431 324 AGGLACLSPE----G----F-KAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQFP--GR-----------S 380 (433)
Q Consensus 324 ~~~~~~l~~~----~----~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~--~~-----------~ 380 (433)
.++..+++.. + + +++++.++.++++++.+.+.|+++ |+.+..|++|+|+|++++ .. .
T Consensus 341 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~ 420 (481)
T PTZ00377 341 LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAP 420 (481)
T ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCc
Confidence 9999998631 1 1 234555557899999999999988 899988999999998764 11 1
Q ss_pred hHHHHHHHHHcCCeEecCCCCCCCC-CCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 381 SWDVFSEILEKTHVVTTPGSGFGPG-GEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 381 ~~~~~~~l~~~~gi~v~~g~~f~~~-~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+..++..+++++||.+.||+.|+.. +++++||+++.+++++++++++|++++
T Consensus 421 ~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 421 DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFH 473 (481)
T ss_pred HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Confidence 3445677888889999999999753 457999999877889999999999876
No 38
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2e-50 Score=401.80 Aligned_cols=347 Identities=21% Similarity=0.337 Sum_probs=280.4
Q ss_pred CCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCCh
Q 045431 61 PDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~ 135 (433)
.+.++|+|+.|+| ++++|+.+.+++.+++.. ...|++..|.++||++||+|+.+ +.++++++|++|+|+
T Consensus 144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~------~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~ 217 (517)
T PRK13355 144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD------TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGV 217 (517)
T ss_pred cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc------CCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcH
Confidence 4567999999998 466799999999887742 34799999999999999999975 335789999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEE
Q 045431 136 KCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDII 209 (433)
Q Consensus 136 ~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i 209 (433)
++++.+ +..++++||+|++++|+|+.|...++.+| .+++.++.+.+++|..+++. .+++++|
T Consensus 218 ~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g------------~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i 285 (517)
T PRK13355 218 SELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAG------------GTAVHYRCDEQSEWYPDIDDIRSKITSRTKAI 285 (517)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCC------------CEEEEeecCcccCCCCCHHHHHHhcCcCceEE
Confidence 999987 57788999999999999999999999998 47888888766666655432 3688999
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceee
Q 045431 210 FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 210 ~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
+++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ..++.++.. ...+++++||||+++++|+|+||
T Consensus 286 ~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~SK~~~~~G~RiG~ 364 (517)
T PRK13355 286 VIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGLSKSHMIAGYRIGW 364 (517)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecchhhccCcccceEE
Confidence 9999999999999999999999999999999999999999988763 456666532 23578889999999999999999
Q ss_pred eecc--ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC--hhHHHHHHHHHHHHHHHHHHHHhhc-CCee
Q 045431 289 TVIP--KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG--FKAVHEVIGFYKENTDIIVETFNSL-GFKV 363 (433)
Q Consensus 289 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 363 (433)
++++ ++++ ..+.+.+... .....+.+.++|.++.++|.... .+++.+.+ ++.++++.+.+.|+++ |+.+
T Consensus 365 ~i~~~~~~~~----~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~-~~~~~r~~l~~~L~~~~g~~~ 438 (517)
T PRK13355 365 MILSGNKRIA----KDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGG-RVYEQRELVYNALNAIPGISA 438 (517)
T ss_pred EEeeCchhhH----HHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHH-HHHHHHHHHHHHHhcCCCccc
Confidence 9965 3332 0011223222 22334578899999999996432 24555543 4456689999999988 8999
Q ss_pred ecCCCccEEEEECCC-----CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 364 YGGKNAPYVWVQFPG-----RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 ~~~~~g~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
..|.+++|+|++++. .++.+++..+++++||.+.||..|+..++++|||+++.+++++++++++|++++
T Consensus 439 ~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~rl~~~~ 512 (517)
T PRK13355 439 VKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMDRLADFF 512 (517)
T ss_pred CCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 999999999999873 245677778888889999999999866788999999889999999999999876
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-50 Score=387.42 Aligned_cols=345 Identities=26% Similarity=0.422 Sum_probs=289.6
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~ 140 (433)
+++|+|+.|+|++++|+.+.+++.+.+.. ....|++..|.++||+++++++++ +..+++++|++|+|+++++.
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~ 98 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALAD-----GETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALM 98 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHH
Confidence 36899999999999999999999888763 234698889999999999999986 55588999999999999998
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCcc-CCcccCCCC-----CCCccEEEEcC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAE-NGFFPDLST-----VARTDIIFFCS 213 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~i~l~~ 213 (433)
+ +..++++||.|++++|+|+.+...++.+| .+++.++.+.+ .++..+++. .++++++++++
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~ 166 (382)
T PRK06108 99 LAAQALVGPGDEVVAVTPLWPNLVAAPKILG------------ARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINS 166 (382)
T ss_pred HHHHHhcCCCCEEEEeCCCccchHHHHHHCC------------CEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEEC
Confidence 7 57778999999999999999999888888 47888888643 233333322 25788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CC-CCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD-DN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~-~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
||||||.+++.+++++|+++|+++|++||+||+|.++.++ +. ..++..+....+++++++||||.+|++|+|+||+++
T Consensus 167 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~ 246 (382)
T PRK06108 167 PNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA 246 (382)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC
Confidence 9999999999999999999999999999999999998876 22 233444433346899999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCcc
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAP 370 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~ 370 (433)
+++++ +.+.+.......+++.+.|.++..++.+. ..++++++++++++++.+.+.|+++ |+.+..|.+|+
T Consensus 247 ~~~~~--------~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~ 317 (382)
T PRK06108 247 PPALG--------QVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAM 317 (382)
T ss_pred CHHHH--------HHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeE
Confidence 98885 56665555455668899999999999743 5678899999999999999999887 88888888999
Q ss_pred EEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 371 YVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 371 ~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
|+|++++. .+..++...+++++||.+.||..|++.+++++||++..+++++++++++|+++++
T Consensus 318 ~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 318 YAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 99999984 3566788888887899999999997666789999987799999999999998764
No 40
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-50 Score=389.06 Aligned_cols=343 Identities=24% Similarity=0.381 Sum_probs=288.2
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al 139 (433)
+.++|+|+.|.|++++++.+.+++.+.+.. ...+|+++.|.++||+++++++++ +..+++++|++|+|+++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 106 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIER-----GETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAI 106 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 457899999999988888899998888753 235799999999999999999975 5566889999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~i~l~~ 213 (433)
.+ +..++++||.|++++|+|+.|...+...+ ..++.++.+.++++..+++ + .+++++++++|
T Consensus 107 ~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~------------~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~ 174 (402)
T PRK06107 107 FLALMATLEAGDEVIIPAPYWVSYPDMVLAND------------GTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNA 174 (402)
T ss_pred HHHHHHhcCCCCEEEEecCCCcCHHHHHHHcC------------CEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEEC
Confidence 97 56778999999999999999988877776 3566666654445444332 2 25788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCC-CCcccccC-CCCcceEEEecccccccccccceeeee
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDN-GSIIVYDSAYALYISDDN-PRSIFEIP-GAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~-~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
||||||.++|.+++++|+++|++| +++||+||+|+++.+++. ..++.++. +..+++++++||||.+++||+|+||++
T Consensus 175 p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~ 254 (402)
T PRK06107 175 PSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA 254 (402)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeee
Confidence 999999999999999999999998 999999999999877653 34455542 234689999999999999999999999
Q ss_pred ccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCc
Q 045431 291 IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNA 369 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g 369 (433)
++++++ +.+.........+++.++|.++..+|+. +..++++.++.++++++.+.+.|+++ |+.+..|++|
T Consensus 255 ~~~~~~--------~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg 325 (402)
T PRK06107 255 GPADLI--------AAINKLQSQSSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGA 325 (402)
T ss_pred cCHHHH--------HHHHHHHHhcccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcc
Confidence 999885 6777777666677899999999999974 35688999999999999999999987 8888888999
Q ss_pred cEEEEECCC------------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 370 PYVWVQFPG------------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 370 ~~~~~~~~~------------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+|+|++++. .++.++...+++++||.+.||..|+. .+++||+++.+.+++++++++|++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 326 FYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIATSLETLEEACARIERAV 398 (402)
T ss_pred eEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 999999742 14567787888888999999999964 57999999989999999999999876
No 41
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.1e-50 Score=388.54 Aligned_cols=337 Identities=21% Similarity=0.292 Sum_probs=287.5
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
.+.++++|+.|+|+++.|+.+ +++.+++. ....+|++..|.++||+++|+++. ++++++|++|+|+++++.
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~-----~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNP-EAFYQELG-----QKKLTYGWIEGSPEFKEAVASLYQ---NVKPENILQTNGATGANF 94 (373)
T ss_pred ccCCCCCCcHHHHHhccCcch-HHHHHHHh-----cCCccCCCCCCCHHHHHHHHHHhc---CCChhhEEEcCChHHHHH
Confidence 356799999999998888888 88888875 334589999999999999999973 368899999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcCC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCSP 214 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~p 214 (433)
+ +..++++||+|+++.|+|+.+...++..| .+++.++.+.++++..+++. .++++++++++|
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g------------~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p 162 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLYDIPESLG------------AEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNA 162 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHcC------------CEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCC
Confidence 7 57889999999999999999999999888 48888988766565554332 367899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
|||||.+++.+++++|+++|++||++||+||+|.++.+++...++.+. .+++|+++||||.+|++|+|+||++++++
T Consensus 163 ~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~---~~~~I~~~s~SK~~~~~G~RiG~i~~~~~ 239 (373)
T PRK07324 163 NNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADL---YEKGISTNSMSKTYSLPGIRVGWIAANEE 239 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhc---cCCEEEEecchhhcCCccceeEEEecCHH
Confidence 999999999999999999999999999999999998776544444433 45789999999999999999999999888
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVW 373 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~ 373 (433)
++ +.+.+.......+++.++|.++..+++. ...++++.++.++++++.+.+.|++. ++.+..|.+|+++|
T Consensus 240 li--------~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~ 310 (373)
T PRK07324 240 VI--------DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSF 310 (373)
T ss_pred HH--------HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEE
Confidence 75 6777777666666788999988888863 34678899999999999999999887 78888888999999
Q ss_pred EECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 374 VQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 374 ~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+.++ +.++.++..++++++||.+.||+.|+. ++++||+++.+++.+++++++|++++
T Consensus 311 i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 311 VKLDVDMPSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCCDTETLKKGLKKLSEFL 368 (373)
T ss_pred EEeCCCCCHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 9887 456778888888888999999999964 57999999888999999999999876
No 42
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-50 Score=388.39 Aligned_cols=344 Identities=29% Similarity=0.471 Sum_probs=290.5
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~ 140 (433)
+++|+|+.|+|++++++.+.+++.+.+. .....|++..|.++||+++|+++.+ +.++++++|++|+|+++++.
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 107 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALD-----EGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATY 107 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHh-----cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHH
Confidence 3589999999998888888888888765 2345798889999999999999975 66788999999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcCC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCSP 214 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~p 214 (433)
+ +..++++||+|++++|+|+.+...+...| .+++.++++.++++..+++. .+++++++++||
T Consensus 108 ~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p 175 (391)
T PRK08361 108 LAFESLLEEGDEVIIPDPAFVCYVEDAKIAE------------AKPIRIPLREENEFQPDPDELLELITKRTRMIVINYP 175 (391)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccHHHHHHcC------------CEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCC
Confidence 7 57788999999999999999998888888 47888888765544444332 257889999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|||||.++|.+++++|+++|++++++||+||+|+++.+++. ..++...+ .+++++++||||++|++|+|+||+++++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~~~~GlRiG~~~~~~ 253 (391)
T PRK08361 176 NNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA--PDNTILANSFSKTFAMTGWRLGFVIAPE 253 (391)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC--CCCEEEEecCchhcCCcHhhhhhhccCH
Confidence 99999999999999999999999999999999999877543 34444442 4678999999999999999999999998
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccE
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPY 371 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~ 371 (433)
+++ +.+.........+++.+.|.++..++++... .++++.++.++++++.+.+.|+++ |+.+..|.+|+|
T Consensus 254 ~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~ 325 (391)
T PRK08361 254 QVI--------KDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY 325 (391)
T ss_pred HHH--------HHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE
Confidence 875 5555555444556788999999999986543 578999999999999999999987 888888888999
Q ss_pred EEEECCC--CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 372 VWVQFPG--RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 372 ~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+|++++. .++.++...+++++||.+.||..|+..+.++|||++..+++++++++++|+++++
T Consensus 326 ~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 326 VFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999973 5677888888777899999999998666789999998888999999999998763
No 43
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4.2e-50 Score=389.95 Aligned_cols=349 Identities=19% Similarity=0.317 Sum_probs=283.8
Q ss_pred CCCCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--------cCCCCCC
Q 045431 60 YPDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--------DLGIEEG 127 (433)
Q Consensus 60 ~~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--------~~~~~~~ 127 (433)
..+.++|+|+.|.|+ +.+|+.+.+++.+.+.. .....|+++.|.++||+++|+|+.+ +..++++
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~ 105 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS----QECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD 105 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc----CCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh
Confidence 356689999999986 45788888988887763 3456898889999999999999975 3457899
Q ss_pred cEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC----
Q 045431 128 DIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST---- 202 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 202 (433)
+|++|+|+++++.+ +..++++||+|++++|+|+.+...++..| .+++.++.+.+.++..+++.
T Consensus 106 ~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~i~~~~~~~~~~d~~~l~~~ 173 (412)
T PTZ00433 106 NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYG------------IEMRFYNCRPEKDWEADLDEIRRL 173 (412)
T ss_pred hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcC------------CEEEEEecCccccCcCCHHHHHHH
Confidence 99999999999997 57778999999999999999999999999 47888887654444333321
Q ss_pred -CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEeccccccc
Q 045431 203 -VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 203 -~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
..++++|+++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++.+++. ..++|+++||||++|
T Consensus 174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~ 252 (412)
T PTZ00433 174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLV 252 (412)
T ss_pred hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcC
Confidence 24789999999999999999999999999999999999999999999887653 345555543 235799999999999
Q ss_pred ccccceeeeec--cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh
Q 045431 281 FTGVRLGWTVI--PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 281 ~~G~r~G~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
+||+|+||+++ ++... +.+.+.+.+... ...+++.++|.++.+++.+....++++.++.++++++.+.+.|++
T Consensus 253 ~pGlRlG~~i~~~p~~~~----~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 327 (412)
T PTZ00433 253 VPGWRLGWLLLVDPHGNG----GDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE 327 (412)
T ss_pred CCCeeEEEEEEeCCcccH----HHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999997 22110 001244444332 234689999999999987644578999999999999999999998
Q ss_pred c-CCeeecCCCccEEEEECCC------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 359 L-GFKVYGGKNAPYVWVQFPG------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 359 ~-g~~~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
+ |+.+..|++|+|+|++++. .++.+++..+++++||.+.||+.|+. ++++||++..+++++++++++|+++
T Consensus 328 ~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~l~~al~~l~~~ 405 (412)
T PTZ00433 328 CIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTISRPVEVLREAVERIKAF 405 (412)
T ss_pred CCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHH
Confidence 6 7888888899999999873 14567888888777999999999864 5799999988889999999999987
Q ss_pred h
Q 045431 432 Y 432 (433)
Q Consensus 432 l 432 (433)
+
T Consensus 406 ~ 406 (412)
T PTZ00433 406 C 406 (412)
T ss_pred H
Confidence 6
No 44
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=7.3e-50 Score=380.55 Aligned_cols=335 Identities=27% Similarity=0.462 Sum_probs=279.8
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHHHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDISR 141 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al~~ 141 (433)
+++|+.|.|++++++.+.+++.+... ....|+++.|.++||+++++|+.+ ++.++++ +|++|+|+++++.+
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP------EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh------ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 68999999998888899888888753 345798889999999999999975 6778887 99999999999997
Q ss_pred -HHHhcCCC---CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 142 -LQIVFGSN---VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 142 -l~~l~~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+..++++| |.|++++|+|+.+...++..| .+++.++.+.++++..+++. .+++++++++
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 143 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAG------------GEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWIN 143 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcC------------CEEEEcccCcccCCccCHHHHHHhhhhccEEEEEe
Confidence 46778887 699999999999999999999 58888888755555334321 2578999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
+||||||.+++.+++++|+++|++||++||+||+|+++.+++.+.++...+ .+++|+++||||.+|++|+|+||++++
T Consensus 144 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~g~~GlRiG~~~~~ 221 (350)
T TIGR03537 144 YPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVG--IENVLAFHSLSKRSGMTGYRSGFVAGD 221 (350)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcC--cCCEEEEeecccccCCccccceeeecC
Confidence 999999999999999999999999999999999999877665444454442 468999999999999999999999998
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
+.++ +.+...........+.++|.++.+++.. ..++++.++.++++++.+.+.|++.|+.+..|.+|+|+
T Consensus 222 ~~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~ 291 (350)
T TIGR03537 222 EKLI--------SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYL 291 (350)
T ss_pred HHHH--------HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEE
Confidence 8774 6666655555555666788887777763 35678889999999999999999999888888889999
Q ss_pred EEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHH
Q 045431 373 WVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 373 ~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
|++++. .++.++.+.+++ +||.+.||..|+...++++||+++.+++++++++++|++
T Consensus 292 ~~~~~~~~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 292 WVKVPSGIDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred EEECCCCCCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 999984 356777777765 599999999997666789999987788999999999976
No 45
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.2e-49 Score=384.31 Aligned_cols=341 Identities=25% Similarity=0.382 Sum_probs=283.5
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCC-CCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIE-EGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~-~~~i~~~~G~~~al 139 (433)
+++|+|+.|.|++.+|+.+.+++.+.+.. ....|.+..|.++||+++++|+.+ ++.++ +++|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al 104 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDA-----NQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhc-----CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 46999999999988888888888887752 235698899999999999999975 55555 47999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C-----CCCccEEE
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T-----VARTDIIF 210 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~i~ 210 (433)
.+ +..++++||+|++++|+|+++...++..| .+++.++.+.+ ++..+.+ + .+++++++
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~~i~ 171 (391)
T PRK07309 105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVG------------AEIVEIDTTEN-DFVLTPEMLEKAILEQGDKLKAVI 171 (391)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcC------------CEEEEEecCCc-CCcCCHHHHHHHhhccCCCeEEEE
Confidence 97 57788999999999999999999999888 47777877542 2322221 1 13689999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
+++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. +.++.++. .+++|+++||||.+|++|+|+||+
T Consensus 172 l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRvG~~ 249 (391)
T PRK07309 172 LNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL--PDQTILINGLSKSHAMTGWRIGLI 249 (391)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc--cCCEEEEecChhhccCccceeEEE
Confidence 999999999999999999999999999999999999999888653 34555542 468999999999999999999999
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCc
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNA 369 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g 369 (433)
+++++++ +.+.........+++.++|.++.+++++. ..+....++.++++++.+.+.|+++|+.+..|.+|
T Consensus 250 v~~~~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg 320 (391)
T PRK07309 250 FAPAEFT--------AQLIKSHQYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGA 320 (391)
T ss_pred EeCHHHH--------HHHHHHHhhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 9999885 56665544445567899999999998753 33346778899999999999999999988888899
Q ss_pred cEEEEECCCC---ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 370 PYVWVQFPGR---SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 370 ~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+|+|++++.. ++.++...+++++||.+.||..|+..++++|||++..+.+++++++++|++++
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~ 386 (391)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYM 386 (391)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999842 45677777777789999999999877788999999888899999999999876
No 46
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.6e-50 Score=394.78 Aligned_cols=348 Identities=17% Similarity=0.262 Sum_probs=274.4
Q ss_pred ceEEecCCCCCC--CC-hHHHHHHHHHHHhh---cccCCCCCCCCCCCCCHHHHHHHHHHHhc--c--CCCCCCcEEEcC
Q 045431 64 EVISLGIGDTTE--PI-PEVITSALAKRSYA---LSTQEGYSGYGAEQGEKPLRAAIASTFYK--D--LGIEEGDIFVSD 133 (433)
Q Consensus 64 ~~i~l~~g~~~~--~~-~~~~~~a~~~~~~~---~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~--~~~~~~~i~~~~ 133 (433)
.+|+|+.+++.+ +. ++.+.+.....+.. .........|++..|.++||++||+|+.+ + +.+++++|++|+
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~ 126 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSG 126 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEcc
Confidence 689999999864 22 33444333321111 11113445788899999999999999985 4 447899999999
Q ss_pred ChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHH-HhCCcccccccccccceEEEeecCccCCcccCCCC---------
Q 045431 134 GAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSV-IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--------- 202 (433)
Q Consensus 134 G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 202 (433)
|+++++.+ +..+++|||.|++++|+|+.+...+. ..| .+++.++++.++++..+++.
T Consensus 127 Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G------------~~vv~v~~~~~~~~~~~~~~le~a~~~a~ 194 (496)
T PLN02376 127 GATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTG------------VEIIPVPCSSSDNFKLTVDAADWAYKKAQ 194 (496)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCC------------CEEEEEeCCCCccCcCCHHHHHHHHHHHH
Confidence 99999997 58889999999999999999998776 467 47888888654444333221
Q ss_pred --CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCC-------CCcceEEE
Q 045431 203 --VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPG-------AKEVAIET 272 (433)
Q Consensus 203 --~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-------~~~~vi~i 272 (433)
..++|+|+++|||||||.++|.+++++|+++|++|+++||+||+|+++.+++. +.++.++.. ..++++++
T Consensus 195 ~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv 274 (496)
T PLN02376 195 ESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274 (496)
T ss_pred hcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEE
Confidence 24789999999999999999999999999999999999999999999887753 556555421 12467889
Q ss_pred ecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh--hHHHHHHHHHHHHHH
Q 045431 273 SSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF--KAVHEVIGFYKENTD 350 (433)
Q Consensus 273 ~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~ 350 (433)
+||||.||+||+|+||++++++.+ .+.+.... ....++.+.|.++.+++.+..+ +++.+.++.++++++
T Consensus 275 ~S~SK~~glpGlRvG~li~~~~~l-------~~~~~~~~--~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~ 345 (496)
T PLN02376 275 YSLSKDMGLPGFRVGIVYSFNDSV-------VSCARKMS--SFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHK 345 (496)
T ss_pred EeccccCCCCcceEEEEEECCHHH-------HHHHHHHh--hcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999975554 23333222 2334789999999999987654 568888999999999
Q ss_pred HHHHHHhhcCCeeecCCCccEEEEECCCC-C-------hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHH
Q 045431 351 IIVETFNSLGFKVYGGKNAPYVWVQFPGR-S-------SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNV 421 (433)
Q Consensus 351 ~l~~~l~~~g~~~~~~~~g~~~~~~~~~~-~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l 421 (433)
.+.+.|++.|+.+..+.+|+|+|++++.. . ..++...++++.||.+.||+.|+...+++|||+|+. +++++
T Consensus 346 ~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l 425 (496)
T PLN02376 346 VFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTL 425 (496)
T ss_pred HHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHH
Confidence 99999999999988888999999999731 1 246677777778999999999987678899999975 78999
Q ss_pred HHHHHHHHHhh
Q 045431 422 LEACKRFKHLY 432 (433)
Q Consensus 422 ~~~l~~l~~~l 432 (433)
++++++|++++
T Consensus 426 ~~al~rl~~~l 436 (496)
T PLN02376 426 HVALGRIQDFV 436 (496)
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 47
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.4e-49 Score=385.50 Aligned_cols=349 Identities=21% Similarity=0.326 Sum_probs=282.4
Q ss_pred CCCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-cCCCCCCcEEEcCCh
Q 045431 61 PDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-DLGIEEGDIFVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~~~~~~~~i~~~~G~ 135 (433)
++.++|+|+.|+|+ +++++.+.+++.+.+.. .....|++..|.++||+++++++.+ +..+++++|++|+|+
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~ 104 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS----GKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGC 104 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc----cCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcCh
Confidence 34578999999985 67888899998887753 3346798999999999999999975 555789999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEE
Q 045431 136 KCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDII 209 (433)
Q Consensus 136 ~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i 209 (433)
++++.+ +..++++||+|++++|+|+.+...++..| ..++.++.+.++++..+++. ..+++++
T Consensus 105 ~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g------------~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 172 (401)
T TIGR01264 105 SHAIEMCIAALANAGQNILVPRPGFPLYETLAESMG------------IEVKLYNLLPDKSWEIDLKQLESLIDEKTAAL 172 (401)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcC------------CEEEEeecCCccCCCCCHHHHHHHhccCceEE
Confidence 999997 57788999999999999999999999898 47777777544333333321 2467899
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceee
Q 045431 210 FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 210 ~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
+++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++.+++. ..++|+++||||+|+++|+|+||
T Consensus 173 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~ 251 (401)
T TIGR01264 173 IVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGW 251 (401)
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEE
Confidence 9999999999999999999999999999999999999999887653 445555543 23589999999999999999999
Q ss_pred eecccc--ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeec
Q 045431 289 TVIPKE--LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYG 365 (433)
Q Consensus 289 l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 365 (433)
+++++. .+ ....+.+..... ...+++.+.|.++.+++.+....++++.++.++++++.+.+.|+++ |+.+..
T Consensus 252 iv~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 326 (401)
T TIGR01264 252 IIIHDRRGIL----RDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVM 326 (401)
T ss_pred EEecCcchhH----HHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 998852 11 001233333222 2345788999999999975445788999999999999999999998 777777
Q ss_pred CCCccEEEEECCC------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 366 GKNAPYVWVQFPG------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 366 ~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
|.+|+|+|++++. .++.++...+++++||.+.||+.|+. ++++||+++.+++++++++++|+++++
T Consensus 327 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 327 PSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEY--PGFFRVVLTVPVVMMEEACSRIQEFCE 398 (401)
T ss_pred CCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCC--CCeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8899999999752 24567778887778999999999863 579999998889999999999998763
No 48
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-49 Score=381.65 Aligned_cols=346 Identities=23% Similarity=0.324 Sum_probs=284.3
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCC-CCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIE-EGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~-~~~i~~~~G~~~al 139 (433)
++.++|+.|++++++|+.+.+++.+.+.. .....|++..|.+++|+++++++++ +..++ +++|++|+|+++++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l 102 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLAN----PENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF 102 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHH
Confidence 35799999999988999999999887753 2335798899999999999999986 44445 78999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPN 215 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~ 215 (433)
.. +..++++||+|++++|+|..+...++..| .+++.++.+.+.++..+ ++. .+++++|+++|||
T Consensus 103 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~ 170 (389)
T PRK05957 103 MNAILAITDPGDEIILNTPYYFNHEMAITMAG------------CQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPN 170 (389)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcC------------CEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCC
Confidence 86 57778999999999999999888888778 47777877543232222 222 3578999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC-CcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
||||.++|.+++++|+++|++||++||+||+|.++.+++.+ .+...+....+++|+++||||.+|++|+|+||++++++
T Consensus 171 NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 250 (389)
T PRK05957 171 NPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH 250 (389)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH
Confidence 99999999999999999999999999999999998876532 23334433346899999999999999999999999988
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CC-eeecCCCccEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GF-KVYGGKNAPYV 372 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~~~g~~~ 372 (433)
++ +.+.........+++.+.|.++..++++ +..++++.++.++++++.+.+.|+++ ++ .+.++.+|+|+
T Consensus 251 ~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~ 321 (389)
T PRK05957 251 LL--------EAIKKIQDTILICPPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYC 321 (389)
T ss_pred HH--------HHHHHHHhhcccCCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEE
Confidence 75 6777666555566788999998898874 33567888888999999999999987 53 66677889999
Q ss_pred EEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHHHHHHHHHHHhhC
Q 045431 373 WVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNVLEACKRFKHLYK 433 (433)
Q Consensus 373 ~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~l~ 433 (433)
|++++ +.++.++..++++++||.+.||+.|+..+++++||+++. +.+++++++++|.+.++
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 322 FLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLK 384 (389)
T ss_pred EEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 99997 567778888888777999999999976666799999964 78999999999988763
No 49
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.5e-49 Score=383.47 Aligned_cols=344 Identities=24% Similarity=0.342 Sum_probs=281.4
Q ss_pred CCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCCh
Q 045431 61 PDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~ 135 (433)
++.++|+|+.|.| ++++|+.+.+++.+.+.. ....|++..|.++||+++++|+.+ ++++++++|++|+|+
T Consensus 28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 102 (398)
T PRK08363 28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKE-----GHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAV 102 (398)
T ss_pred cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHc-----CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCH
Confidence 3457999999998 677889999999887753 235788889999999999999975 677899999999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEe-ecCccCCcccCCC---C--CCCccE
Q 045431 136 KCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYM-RCTAENGFFPDLS---T--VARTDI 208 (433)
Q Consensus 136 ~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~--~~~~~~ 208 (433)
++++.+ +..++++||.|++++|+|+.+...++..|. .++.+ +.+. .++..+++ + .+++++
T Consensus 103 ~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~v~~~~~~~-~~~~~d~~~l~~~~~~~~~~ 169 (398)
T PRK08363 103 TEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGG------------VPVEYRTIEE-EGWQPDIDDIRKKITEKTKA 169 (398)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCC------------EEEEeccccc-cCCcCCHHHHHhhCCcceEE
Confidence 999997 577889999999999999999998888883 55555 3332 23333322 1 257899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
++++|||||||.+++.+++++|+++|+++|++||+||+|.++.+++.+.++.+++. .+++++++||||++++||+|+||
T Consensus 170 v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~ 248 (398)
T PRK08363 170 IAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTK-DVPVIVMNGLSKVYFATGWRLGY 248 (398)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCc-CCcEEEEecchhccCCccceEEE
Confidence 99999999999999999999999999999999999999999887665555556653 45799999999998899999999
Q ss_pred eec--cccccccCCcchhHHHHHHHh---hccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCe
Q 045431 289 TVI--PKELLFSDGFPVAKDFNRIVC---TCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFK 362 (433)
Q Consensus 289 l~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 362 (433)
+++ +++++ +.+..... ....+++.++|.++.++|.+ ..+++++.++.++++++.+.+.|+++ ++.
T Consensus 249 ~~~~~~~~~~--------~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 249 IYFVDPEGKL--------AEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS 319 (398)
T ss_pred EEEeCcHHHH--------HHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 997 55553 33332221 12245789999999988874 35788999999999999999999987 788
Q ss_pred eecCCCccEEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 363 VYGGKNAPYVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 363 ~~~~~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+..|.+|+|+|+++++ .++.+++..+++++||.+.||..|+..+++++||+++.+++++++++++|++++
T Consensus 320 ~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 392 (398)
T PRK08363 320 TTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFM 392 (398)
T ss_pred ecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 8788899999999874 245667777777889999999999766678999999888899999999999875
No 50
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.4e-49 Score=386.60 Aligned_cols=348 Identities=21% Similarity=0.296 Sum_probs=276.7
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhc-------ccCCCCCCCCCCCCCHHHHHHHHHHHhc--c--CCCCCCcEEE
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYAL-------STQEGYSGYGAEQGEKPLRAAIASTFYK--D--LGIEEGDIFV 131 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~-------~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~--~~~~~~~i~~ 131 (433)
..+|+|+++++.+ ....+.+.+.+..... ........|.+..|.++||+++|+|+++ + ..+++++|++
T Consensus 47 ~g~i~l~~aeN~l-~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivi 125 (447)
T PLN02607 47 SGVIQMGLAENQV-SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVL 125 (447)
T ss_pred CceEEEechhhhh-hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEE
Confidence 3599999999853 5556666665543210 0112345688889999999999999985 2 3478999999
Q ss_pred cCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH-hCCcccccccccccceEEEeecCccCCcccCCCC-------
Q 045431 132 SDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST------- 202 (433)
Q Consensus 132 ~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 202 (433)
|+|+++++.+ +..+++|||.|++++|+|+++...+.. .| .+++.++.+.++++..+++.
T Consensus 126 t~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g------------~~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 126 TAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG------------VKIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCC------------cEEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 9999999997 477889999999999999999877763 45 47788887755555444321
Q ss_pred ----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCccccc----C--CCCcceEE
Q 045431 203 ----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEI----P--GAKEVAIE 271 (433)
Q Consensus 203 ----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~----~--~~~~~vi~ 271 (433)
..++|+|+++|||||||.++|.+++++|+++|++|+++||+||+|+++.+++. +.++.++ + +.++++++
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~v 273 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHI 273 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEE
Confidence 13789999999999999999999999999999999999999999999877653 4555543 1 12568999
Q ss_pred EecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh--hHHHHHHHHHHHHH
Q 045431 272 TSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF--KAVHEVIGFYKENT 349 (433)
Q Consensus 272 i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~ 349 (433)
++||||.||++|+|+||+++.++.+ ...+... .....+|.++|.++..+|.+..+ .+++..++++++++
T Consensus 274 i~s~SK~fg~~GlRvG~ivs~n~~l-------~~~~~~~--~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~ 344 (447)
T PLN02607 274 VYSLSKDLGLPGFRVGTIYSYNDKV-------VTTARRM--SSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRY 344 (447)
T ss_pred EEcchhcCCCCcceEEEEEEcCHHH-------HHHHHHH--hhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999844332 2333332 22334688999999999987654 57888999999999
Q ss_pred HHHHHHHhhcCCeeecCCCccEEEEECCCC------C-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHH
Q 045431 350 DIIVETFNSLGFKVYGGKNAPYVWVQFPGR------S-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNV 421 (433)
Q Consensus 350 ~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~------~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l 421 (433)
+.+.+.|++.|+.+..+.+|+|+|++++.. + ..++...+++++||.+.||..|+...++++||+|+. +++++
T Consensus 345 ~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l 424 (447)
T PLN02607 345 EMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTL 424 (447)
T ss_pred HHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHH
Confidence 999999999999988888999999999731 1 235666778778999999999987778999999986 89999
Q ss_pred HHHHHHHHHhh
Q 045431 422 LEACKRFKHLY 432 (433)
Q Consensus 422 ~~~l~~l~~~l 432 (433)
+++++||++++
T Consensus 425 ~~gl~Ri~~~l 435 (447)
T PLN02607 425 EVALKRIHRFM 435 (447)
T ss_pred HHHHHHHHHHH
Confidence 99999999876
No 51
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-48 Score=376.97 Aligned_cols=345 Identities=23% Similarity=0.359 Sum_probs=286.7
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~a 138 (433)
.+.+.|+|+.|+|+.++++.+.+++.+.+.. .....|++..|.++||+++++++.+ +..+++++|++|+|++++
T Consensus 27 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 102 (386)
T PRK07550 27 ADGPLIDLSQAVPGYPPPPELLRALAEAAAD----PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQA 102 (386)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhC----cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 3556899999999888888888888887742 3456898889999999999999985 666789999999999999
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEc
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFC 212 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~ 212 (433)
+.+ +..++++||+|++++|+|+.+...++..| .+++.++.+.+.++..+++. ..++++++++
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~ 170 (386)
T PRK07550 103 FWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLG------------IRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALV 170 (386)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcC------------CEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEe
Confidence 997 56778999999999999999998888888 58888888754455444321 2578899999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
+||||||.++|.+++++|+++|++||++||+||+|+++.+++. +.++.......+++++++||||.+|++|+|+||+++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~ 250 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVA 250 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeec
Confidence 9999999999999999999999999999999999998866432 333443322356899999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCcc
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAP 370 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~ 370 (433)
+++++ +.+.+.......+++.++|.++..++.+ ..+++++.++.++++++.+.+.|.++ ++.+. +.+|+
T Consensus 251 ~~~~~--------~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~ 320 (386)
T PRK07550 251 SPARI--------AEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAY 320 (386)
T ss_pred CHHHH--------HHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceE
Confidence 98875 6666666555666789999999998874 34678889999999999999999986 66554 56899
Q ss_pred EEEEECC--CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHHHHHHHHHHHh
Q 045431 371 YVWVQFP--GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNVLEACKRFKHL 431 (433)
Q Consensus 371 ~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~ 431 (433)
|+|++++ +.++.++...+++++||.+.||..|+..+++++||+++. +++++++++++|+++
T Consensus 321 ~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 321 FAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred EEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 9999997 356788888888888999999999976667899999875 789999999999875
No 52
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.4e-48 Score=376.94 Aligned_cols=343 Identities=21% Similarity=0.279 Sum_probs=283.4
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCChHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGAKCDIS 140 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~~~al~ 140 (433)
++|+|+.|.|+.+.|+.+++++.+.+.. ....|++..|.++||+++++++.+ ++.++++ +|++|+|+++++.
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 99 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIAG-----GVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIA 99 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 6899999999887777788887776652 346798889999999999999875 5556665 7999999999998
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccC-CcccCCCC-----CCCccEEEEcC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN-GFFPDLST-----VARTDIIFFCS 213 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~i~l~~ 213 (433)
+ +..++++||+|++++|+|+.+...++..| ..++.++.++++ ++..+++. .+++++|++++
T Consensus 100 ~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~ 167 (387)
T PRK07777 100 AAVLGLVEPGDEVLLIEPYYDSYAAVIAMAG------------AHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNS 167 (387)
T ss_pred HHHHHhcCCCCEEEEeCCCchhhHHHHHHCC------------CEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcC
Confidence 7 67788999999999999999998888888 367777776542 33334322 25789999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
||||||.+++.+++++|+++|++|+++||+||+|.++.+++. +.++.++++..+++++++||||.||++|+|+||++++
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 247 (387)
T PRK07777 168 PHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP 247 (387)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC
Confidence 999999999999999999999999999999999999887653 4455555544568999999999999999999999999
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++++ +.+...........+.+.|.++..++.. ...+++++++.++++++.+.+.|++.|+.+.++.+++|+
T Consensus 248 ~~l~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~ 318 (387)
T PRK07777 248 APLI--------AAVRAAKQYLTYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFL 318 (387)
T ss_pred HHHH--------HHHHHHHhhcccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEE
Confidence 8875 6666555544455677888888888864 346788999999999999999999988888888899999
Q ss_pred EEECCC---CChHHHHHHHHHcCCeEecCCCCCCC---CCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 373 WVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGP---GGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
|++++. .++.++...+++++||.+.||..|+. .+++++||+++.+++++++++++|+++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 319 CADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred EecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 999752 35678888887778999999998863 2357899999889999999999998864
No 53
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.5e-48 Score=377.00 Aligned_cols=349 Identities=23% Similarity=0.346 Sum_probs=274.4
Q ss_pred CCCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-c-CCCCCCcEEEcCC
Q 045431 60 YPDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-D-LGIEEGDIFVSDG 134 (433)
Q Consensus 60 ~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~-~~~~~~~i~~~~G 134 (433)
+.+.++|+|+.|+| ++++|+.+.+++.+.+. ....|+++.|.++||+++|+|+.+ + +++++++|++|+|
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G 103 (404)
T PRK09265 30 EEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLP------TAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNG 103 (404)
T ss_pred HcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhh------cCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCC
Confidence 45667999999988 45678888888887653 235799999999999999999975 3 3789999999999
Q ss_pred hHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCccE
Q 045431 135 AKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTDI 208 (433)
Q Consensus 135 ~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~ 208 (433)
+++++.+ +..++++||+|++++|+|+.+...++..| ..++.++.+.++++..+++ . .+++++
T Consensus 104 ~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~ 171 (404)
T PRK09265 104 VSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSG------------GKPVHYLCDEEAGWFPDLDDIRSKITPRTKA 171 (404)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcC------------CEEEEEecccccCCCCCHHHHHHhccccceE
Confidence 9999987 57788999999999999999999888888 3666777654444433322 1 257899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEeccccccccccccee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
|+++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..++. ..++++++||||++|+||+|+|
T Consensus 172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG 250 (404)
T PRK09265 172 IVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP-DLLCVTFNGLSKAYRVAGFRVG 250 (404)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC-CceEEEEecchhhccCcccceE
Confidence 99999999999999999999999999999999999999999887653 455555543 3478999999999999999999
Q ss_pred eeecc--ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhc-CCee
Q 045431 288 WTVIP--KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSL-GFKV 363 (433)
Q Consensus 288 ~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 363 (433)
|++++ +.+. ..+.+.+... .....+++.++|.++.++|.+... .++.+..+++.++++.+.+.|+++ |+.+
T Consensus 251 ~~v~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 325 (404)
T PRK09265 251 WMVLSGPKKHA----KGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSC 325 (404)
T ss_pred EEEEeCchHHH----HHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 99964 3221 0012223221 223455788999999999864322 222223356778899999999887 8888
Q ss_pred ecCCCccEEEEECCCC-----ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 364 YGGKNAPYVWVQFPGR-----SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 ~~~~~g~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
..|.+|+|+|++++.. ++.+.+..++.++||.+.||..|+..+++++|++++.+++++++++++|++++
T Consensus 326 ~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l 399 (404)
T PRK09265 326 VKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFL 399 (404)
T ss_pred cCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 8888999999999732 35566667777889999999999765678999999878999999999999876
No 54
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=3.4e-48 Score=371.28 Aligned_cols=330 Identities=22% Similarity=0.410 Sum_probs=270.1
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCC-CCCCcEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLG-IEEGDIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~-~~~~~i~~~~G~~~a 138 (433)
+.++|+|+.|.|..+.++.+.+++.+... ..+|+++.|.++||+++++|+.+ ++. +++++|++|+|++++
T Consensus 26 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~ 98 (364)
T PRK07865 26 PDGIVDLSVGTPVDPVPPVIQEALAAAAD-------APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL 98 (364)
T ss_pred CCCEEEcCCCCCCCCCCHHHHHHHHHHHh-------hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence 34689999999887778888888776432 13798889999999999999985 664 789999999999999
Q ss_pred HHHH-HHh-cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCC
Q 045431 139 ISRL-QIV-FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNN 216 (433)
Q Consensus 139 l~~l-~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~n 216 (433)
+.++ ..+ +++||.|++++|+|+.+...++..|. +++.++. ..+++. .++++|+++||||
T Consensus 99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~~~~------~~~l~~-~~~~~v~~~~p~N 159 (364)
T PRK07865 99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGA------------TVVRADS------LTELGP-QRPALIWLNSPSN 159 (364)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCC------------EEEecCC------hhhCCc-ccceEEEEcCCCC
Confidence 9985 555 69999999999999999999988884 5555532 112222 5789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc---CCCCcceEEEecccccccccccceeeeeccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI---PGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~---~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|||.+++.+++++|+++|++||++||+||+|.++.+++.+.+.... ....+++|+++||||.+|++|+|+||+++++
T Consensus 160 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~ 239 (364)
T PRK07865 160 PTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP 239 (364)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH
Confidence 9999999999999999999999999999999998876533322221 1124689999999999999999999999998
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+++ +.+..........++.+.|.++.+++.+ .+++++.++.++++++.+.+.|+++|+.+..+++|+|+|
T Consensus 240 ~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 309 (364)
T PRK07865 240 ALV--------AELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLW 309 (364)
T ss_pred HHH--------HHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEE
Confidence 885 6666655555566889999999998875 456788899999999999999999998888888999999
Q ss_pred EECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHH
Q 045431 374 VQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFK 429 (433)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~ 429 (433)
+.++. +..++...+ +++||.+.||..|+...++++||+++.+++++++++++|+
T Consensus 310 ~~~~~-~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 310 ATRGE-DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred EeCCC-CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 99852 344555554 5669999999988766678999999878999999999985
No 55
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.9e-48 Score=374.59 Aligned_cols=349 Identities=20% Similarity=0.330 Sum_probs=282.8
Q ss_pred CCCceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCC
Q 045431 61 PDAEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDG 134 (433)
Q Consensus 61 ~~~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G 134 (433)
++.++|+|+.|+|. +++++.+.+++.+.+.. .....|++..|.+++|+++++++.+ ++.+++++|++|+|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G 104 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS----GKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSG 104 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecC
Confidence 45689999999984 67888999999988753 2345798899999999999999975 56678899999999
Q ss_pred hHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccE
Q 045431 135 AKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDI 208 (433)
Q Consensus 135 ~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 208 (433)
+++++.+ +..++++||+|++++|+|+.+...+...| .+++.++.+.++++..+++. .+++++
T Consensus 105 ~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (403)
T TIGR01265 105 CSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSG------------LEVRLYDLLPEKDWEIDLDGLEALADEKTVA 172 (403)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcC------------CEEEEecCCcccCCccCHHHHHHHhCcCccE
Confidence 9999997 57778999999999999999988888888 47777776544343333321 357889
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEeccccccccccccee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
+++++||||||.+++.+++++|+++|+++|++||+||+|+++.+++. ..++.+++. ..++|+++||||.|++||+|+|
T Consensus 173 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG 251 (403)
T TIGR01265 173 IVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLG 251 (403)
T ss_pred EEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEE
Confidence 99999999999999999999999999999999999999999987763 345666643 3469999999999989999999
Q ss_pred eeeccc--cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeee
Q 045431 288 WTVIPK--ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVY 364 (433)
Q Consensus 288 ~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~ 364 (433)
|+++++ .++. .++.+.+..... ...+++.++|.++.+++++....++++.+++++++++.+.+.|+.+ |+.+.
T Consensus 252 ~~v~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T TIGR01265 252 WIIIHDPHGIFR---DTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCP 327 (403)
T ss_pred EEEEeCchhhhH---HHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 999853 3320 001122332221 2345788999999999976545788999999999999999999987 78877
Q ss_pred cCCCccEEEEECCCC------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 365 GGKNAPYVWVQFPGR------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 365 ~~~~g~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.|.+|+|+|++++.. ++.++...+++++||.+.||..|+. ++++||+++.+++++++++++|++++
T Consensus 328 ~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~--~~~iRis~~~~~~~l~~~l~~l~~~~ 399 (403)
T TIGR01265 328 KPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGL--PNWVRITITVPESMLEEACSRIKEFC 399 (403)
T ss_pred CCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 788999999999732 5677878878788999999999963 68999999888899999999999876
No 56
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-48 Score=373.78 Aligned_cols=342 Identities=25% Similarity=0.360 Sum_probs=282.1
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-cCCCCCCcEEEcCChHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-DLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~~~~~~~~i~~~~G~~~al~~ 141 (433)
..+|+|+.|.|+.+.|+.+.+++.+.. .....|++..|.++||+++++++.+ ++++++++|++|+|+++++.+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~ 103 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYD------EEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILF 103 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHh------cCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHH
Confidence 468999999999888888888887754 2345798899999999999999975 677889999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCccc-C---CCC--CCCccEEEEcCC
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP-D---LST--VARTDIIFFCSP 214 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~--~~~~~~i~l~~p 214 (433)
+..++++||+|++++|+|+.+...++..| .+++.++.+.+.++.. + ++. .+++++|+++||
T Consensus 104 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p 171 (397)
T PRK07568 104 AMMAICDPGDEILVPEPFYANYNGFATSAG------------VKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNP 171 (397)
T ss_pred HHHHhcCCCCEEEEecCCCccHHHHHHHcC------------CEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECC
Confidence 56778999999999999999988888888 4788888764444432 1 222 357889999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|||||.+++.+++++|+++|++++++||+||+|.++.+++. +.++.++++..+++++++||||.+|++|+|+||+++++
T Consensus 172 ~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~ 251 (397)
T PRK07568 172 GNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKN 251 (397)
T ss_pred CCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCC
Confidence 99999999999999999999999999999999999887654 45566665446789999999999998999999999864
Q ss_pred -cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccE
Q 045431 294 -ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPY 371 (433)
Q Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~ 371 (433)
+++ +.+.+.... ..+++.+.|.++..+++. ...+++++++.++++++.+.+.|+++ ++.+..|.+|+|
T Consensus 252 ~~~~--------~~~~~~~~~-~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~ 321 (397)
T PRK07568 252 KELI--------AAAMKLCQA-RLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY 321 (397)
T ss_pred HHHH--------HHHHHHhhc-cCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE
Confidence 453 444443322 345788999999998874 35688999999999999999999987 778788889999
Q ss_pred EEEECCCCChHHHHHHHHHc-----CCeEecCCCCCCC---CCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 372 VWVQFPGRSSWDVFSEILEK-----THVVTTPGSGFGP---GGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~f~~---~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+|++++..+..++...++++ +||.+.||..|+. .+++++||+++.+++++++++++|++++
T Consensus 322 ~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~~~l 390 (397)
T PRK07568 322 IIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILKEAL 390 (397)
T ss_pred EEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 99999865667777777664 6999999998852 1357999999888899999999999876
No 57
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=371.96 Aligned_cols=344 Identities=26% Similarity=0.427 Sum_probs=289.3
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al 139 (433)
+.++++|+.|+|+.++++.+.+++.+.+.. ....|++..|.++||+++|+++.+ +.++++++|++|+|+++++
T Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~ 104 (393)
T PRK05764 30 GRDVISLGAGEPDFDTPEHIKEAAIEALDD-----GKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQAL 104 (393)
T ss_pred cCCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----CCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHH
Confidence 457899999999988888999998888763 234698899999999999999975 5567889999999999999
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~ 213 (433)
.+ +..++++||.|++++|+|..+...++..| .+++.++.+.++++..+++. .++++++++++
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 172 (393)
T PRK05764 105 YNAFMALLDPGDEVIIPAPYWVSYPEMVKLAG------------GVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNS 172 (393)
T ss_pred HHHHHHhcCCCCEEEecCCCCcchHHHHHHcC------------CEEEEEecCcccCCcCCHHHHHHhhCccceEEEEEC
Confidence 87 57788999999999999999999888888 47888888755455444321 25788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCccccc-CCCCcceEEEecccccccccccceeeeec
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEI-PGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~-~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
||||||.++|.+++++|+++|++|++++|+||+|+++.+++. +.++.++ .+..+++++++||||.+|++|+|+||+++
T Consensus 173 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~ 252 (393)
T PRK05764 173 PSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG 252 (393)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec
Confidence 999999999999999999999999999999999999877643 3455554 22356899999999999999999999999
Q ss_pred cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCcc
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAP 370 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~ 370 (433)
+++++ +.+.+.......+++.++|.++.+++.. ...+++++++.++++++.+.+.|+++ |+.+..|.+++
T Consensus 253 ~~~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~ 323 (393)
T PRK05764 253 PKELI--------KAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAF 323 (393)
T ss_pred CHHHH--------HHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcce
Confidence 98875 6666666555667899999999999873 34678889999999999999999998 88888888899
Q ss_pred EEEEECCCC------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 371 YVWVQFPGR------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 371 ~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
|+|++++.. ++.++...+++++||.+.||..|+. ++++||++..+++++++++++|.++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 324 YVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYATSLEDLEEGLERIERFLE 390 (393)
T ss_pred EEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 999999742 2367777888878999999998865 689999998899999999999998763
No 58
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.2e-47 Score=364.33 Aligned_cols=329 Identities=22% Similarity=0.389 Sum_probs=269.0
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCC-CCCCcEEEcCChHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLG-IEEGDIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~-~~~~~i~~~~G~~~a 138 (433)
..++|+|+.|+|+.++++.+.+++.+... ...|+++.|.++||+++++|+.+ ++. +++++|++|+|++++
T Consensus 20 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~ 92 (357)
T TIGR03539 20 PDGIVDLSVGTPVDPVPPLIRAALAAAAD-------APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92 (357)
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh-------hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence 34689999999988888888888876542 24788889999999999999975 664 889999999999999
Q ss_pred HHHH-HHh-cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCC
Q 045431 139 ISRL-QIV-FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNN 216 (433)
Q Consensus 139 l~~l-~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~n 216 (433)
+.++ ..+ +++||.|++++|+|+.+...++..|. +++.++. . ..++ ..++++|++++|||
T Consensus 93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~--~----~~l~-~~~~~~v~~~~p~N 153 (357)
T TIGR03539 93 VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGA------------TPVAADD--P----TELD-PVGPDLIWLNSPGN 153 (357)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCC------------EEeccCC--h----hhcC-ccCccEEEEeCCCC
Confidence 9985 555 69999999999999999988888883 5555431 1 1122 24789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc---CCCCcceEEEecccccccccccceeeeeccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI---PGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~---~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|||.++|.+++++|+++|++||++||+||+|.++.+++.+.+.... +...+++|+++||||.++++|+|+||+++++
T Consensus 154 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~ 233 (357)
T TIGR03539 154 PTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP 233 (357)
T ss_pred CcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH
Confidence 9999999999999999999999999999999988776543222211 1224579999999999999999999999998
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+++ +.+.+.......+++.+.|.++.+++.+ ..++++.++.++++++.+.+.|++.|+.+..|.+|+|+|
T Consensus 234 ~~~--------~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~ 303 (357)
T TIGR03539 234 ALV--------AELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLW 303 (357)
T ss_pred HHH--------HHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEE
Confidence 875 5666655555566889999999999874 356788899999999999999999898888888999999
Q ss_pred EECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHH
Q 045431 374 VQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRF 428 (433)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l 428 (433)
+.++. +..++...+ .++||.+.||..|+..+++++||+++.+++++++++++|
T Consensus 304 ~~~~~-~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 304 ATRGE-DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred EECCC-CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 99863 445566555 566999999998876667899999988899999999987
No 59
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.1e-48 Score=382.14 Aligned_cols=346 Identities=19% Similarity=0.297 Sum_probs=270.2
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~ 140 (433)
+++|+|+.+.+.+ |..+++.+.+.+.... ......|+++.|.++||++||+|+.+ ++.+++++|++|+|+++++.
T Consensus 129 p~~i~~~~~~~~f--p~~~i~~a~~~l~~~~-~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~ 205 (534)
T PLN02231 129 PSLLDKSETHGLF--SADAIERAWQILDQIP-GRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVH 205 (534)
T ss_pred CccCCCCCccccC--CHHHHHHHHHHHHhcC-CccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHH
Confidence 4577887655544 4466666666665421 12456899999999999999999975 67789999999999999999
Q ss_pred HH-HHhc-CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC-----------CCcc
Q 045431 141 RL-QIVF-GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV-----------ARTD 207 (433)
Q Consensus 141 ~l-~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 207 (433)
++ ..++ .+||.|++++|+|+.|...+...| ..++.++.+.+++|..+++.. .+++
T Consensus 206 ~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g------------~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k 273 (534)
T PLN02231 206 MMMQLLIRSEKDGILCPIPQYPLYSASIALHG------------GTLVPYYLDEATGWGLEISELKKQLEDARSKGITVR 273 (534)
T ss_pred HHHHHhccCCCCEEEEeCCCChhHHHHHHHcC------------CEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeE
Confidence 85 5666 479999999999999999999999 478888887665555553321 1689
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCcccccCC------CCcceEEEecccccc
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD--NPRSIFEIPG------AKEVAIETSSFSKYA 279 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~--~~~~~~~~~~------~~~~vi~i~S~sK~~ 279 (433)
+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.++..+.. ...++|+++||||.+
T Consensus 274 ~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~ 353 (534)
T PLN02231 274 ALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGY 353 (534)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCccc
Confidence 99999999999999999999999999999999999999999998853 2445554421 123689999999975
Q ss_pred -cccccceeeeec---cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcC-----Ch-h---HHHHHHHHHH
Q 045431 280 -GFTGVRLGWTVI---PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPE-----GF-K---AVHEVIGFYK 346 (433)
Q Consensus 280 -~~~G~r~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----~~-~---~~~~~~~~~~ 346 (433)
|++|+|+||+++ +++++ +.+.+... ...+++.+.|.++..+++.. .+ . +...+++.|+
T Consensus 354 ~g~pGlRiGy~~~~~~~~~l~--------~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~ 424 (534)
T PLN02231 354 YGECGKRGGYMEVTGFTSDVR--------EQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLA 424 (534)
T ss_pred ccCCccceEEEEEecCCHHHH--------HHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 789999999986 45553 55655443 23456788899888888642 22 2 3445688999
Q ss_pred HHHHHHHHHHhhc-CCeeecCCCccEEEEEC--CCC-----------ChHHHHHHHHHcCCeEecCCCCCCC-CCCCeEE
Q 045431 347 ENTDIIVETFNSL-GFKVYGGKNAPYVWVQF--PGR-----------SSWDVFSEILEKTHVVTTPGSGFGP-GGEGFIR 411 (433)
Q Consensus 347 ~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~--~~~-----------~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iR 411 (433)
++++.+.+.|+++ |+.+.+|++|+|+|+++ +.. .+..+...+++++||.+.||+.|+. .+..+||
T Consensus 425 ~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~R 504 (534)
T PLN02231 425 RRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFR 504 (534)
T ss_pred HHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEE
Confidence 9999999999998 89999999999999655 321 1223456678888999999999985 3456899
Q ss_pred EeeccChhHHHHHHHHHHHhh
Q 045431 412 VSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 412 i~~~~~~~~l~~~l~~l~~~l 432 (433)
+++..+++++++++++|++++
T Consensus 505 it~~~~~e~l~eal~RL~~~~ 525 (534)
T PLN02231 505 CTILPQEDKIPAIVSRLTEFH 525 (534)
T ss_pred EEeCCCHHHHHHHHHHHHHHH
Confidence 999889999999999999875
No 60
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-48 Score=374.03 Aligned_cols=359 Identities=21% Similarity=0.267 Sum_probs=273.4
Q ss_pred HHHHHHHHHhcCCC-------CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHh-c
Q 045431 49 IARRKAAHMLKYPD-------AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFY-K 120 (433)
Q Consensus 49 ~~~~~~~~~~~~~~-------~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~-~ 120 (433)
+..+...+...+.+ .++|+|+.|+|++++|+.+.++. +++. . .+|+++.|.++||+++++++. +
T Consensus 79 ~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~~~~~~~v~e~~-~~~~-----~--~~Y~~~~g~~~lreaia~~~~~~ 150 (527)
T PRK09275 79 IEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLGFDADEFVYELV-DGII-----G--DNYPVPDRMLKHTEKIVKDYLRQ 150 (527)
T ss_pred HHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCCCCCCHHHHHHH-HHHh-----c--CCCCCCCCCHHHHHHHHHHHHHh
Confidence 34455555554443 24799999999999999988844 4443 1 259999999999999999654 3
Q ss_pred c--CCC-C--CCcEEEcCChHHHHHH-HHH-----hcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEee
Q 045431 121 D--LGI-E--EGDIFVSDGAKCDISR-LQI-----VFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMR 189 (433)
Q Consensus 121 ~--~~~-~--~~~i~~~~G~~~al~~-l~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 189 (433)
. ... + +++|++|+|+++++.. +.+ +++|||+|++++|+|+.|...++..|.. ..++.++
T Consensus 151 ~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~----------~~~v~v~ 220 (527)
T PRK09275 151 EMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYD----------LEVVHIN 220 (527)
T ss_pred hccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCC----------eEEEEee
Confidence 2 222 2 3499999999999986 443 6899999999999999999998887632 2455565
Q ss_pred cCccCCcccCCC---C--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHH--cCCEEEEeccccccccCCCCCccccc
Q 045431 190 CTAENGFFPDLS---T--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKD--NGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 190 ~~~~~~~~~~~~---~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~--~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
.+.+++|..+.+ + .+++|+|+++|||||||.++|.+++++|+++|++ ++++||+||+|.++.+. +.++.+.
T Consensus 221 ~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~--~~s~~~~ 298 (527)
T PRK09275 221 ADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD--FRSLFAV 298 (527)
T ss_pred cCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc--ccCHHHh
Confidence 555555655532 2 3689999999999999999999999999999965 59999999999988652 3444443
Q ss_pred CCCCcceEEEecccccccccccceeeeecccc-----ccccC------------------------CcchhHHHHHHHhh
Q 045431 263 PGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE-----LLFSD------------------------GFPVAKDFNRIVCT 313 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~-----~~~~~------------------------~~~~~~~~~~~~~~ 313 (433)
.++++|+++||||.||++|||+||++++++ ++..- ..++.++..++...
T Consensus 299 --~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~ 376 (527)
T PRK09275 299 --LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALN 376 (527)
T ss_pred --CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHh
Confidence 357899999999999999999999999987 22100 00112223555666
Q ss_pred ccCCCcHHHHHHH-----HHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC----------
Q 045431 314 CFNGASNISQAGG-----LACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG---------- 378 (433)
Q Consensus 314 ~~~~~~~~~q~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~---------- 378 (433)
...+.+.+.|.++ .++++ ....+++.+++.+++|++.+.+.|. .++...+|.+++|+|++++.
T Consensus 377 ~t~~~s~p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f 454 (527)
T PRK09275 377 HTAGLSTPQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEF 454 (527)
T ss_pred hccCCCCHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchh
Confidence 6778888999862 24454 3446788999999999999988883 23333567899999999862
Q ss_pred -------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHHHHHHHHHHHhh
Q 045431 379 -------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNVLEACKRFKHLY 432 (433)
Q Consensus 379 -------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~l 432 (433)
.++.+++.+|++++||.+.||..|+. +++++|+|+++ ++++++++.++|++++
T Consensus 455 ~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l 515 (527)
T PRK09275 455 ADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLL 515 (527)
T ss_pred hhhhhccCCHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 14677889999999999999999975 46789999985 8899999999999876
No 61
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-46 Score=332.38 Aligned_cols=350 Identities=20% Similarity=0.310 Sum_probs=296.9
Q ss_pred CceEEecCCCCC----CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccC--CCCCCcEEEcCChH
Q 045431 63 AEVISLGIGDTT----EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDL--GIEEGDIFVSDGAK 136 (433)
Q Consensus 63 ~~~i~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~--~~~~~~i~~~~G~~ 136 (433)
.++|.++.|+|. +++.+...+|+.+++.. ....+|+|..|.+..|+++|+|+++.+ ..++++|++|+|+.
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~S----gk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~ 136 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRS----GKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCS 136 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhc----CCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccch
Confidence 479999999985 55678888899988874 667799999999999999999998743 46899999999999
Q ss_pred HHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEE
Q 045431 137 CDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIF 210 (433)
Q Consensus 137 ~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~ 210 (433)
+|+++ +..+.+||..|+++.|+|+.|.......| +++..+..-++.+|..|++. .++|.+++
T Consensus 137 qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~------------lEVR~ydlLPe~~weIDL~~veal~DENT~Aiv 204 (447)
T KOG0259|consen 137 QAIELAISSLANPGANILLPRPGFPLYDTRAIYSG------------LEVRYYDLLPEKDWEIDLDGVEALADENTVAIV 204 (447)
T ss_pred HHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcC------------ceeEeecccCcccceechHHHHHhhccCeeEEE
Confidence 99998 68888999999999999999998887777 58888888888888888653 47999999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
++||+||+|.++|.+.+++|++.|+|++++||.||+|.++.|++. ..++..+...- -|+++||.||.|=.||||+||+
T Consensus 205 viNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiV-PVitlggisKrW~VPGWRlGWi 283 (447)
T KOG0259|consen 205 VINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIV-PVITLGGISKRWIVPGWRLGWI 283 (447)
T ss_pred EeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccC-ceEeecccccccccCCceeeeE
Confidence 999999999999999999999999999999999999999999876 45666654322 3799999999777899999999
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCe-eecCC
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFK-VYGGK 367 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~ 367 (433)
+..+..=......+.+.+..+. ....+++.+.|.|.-..|+....+........++.+.+..++.|++. ++. ...|+
T Consensus 284 ~~hD~~gvf~~~~~~q~~~~~~-~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPe 362 (447)
T KOG0259|consen 284 ALHDPRGVFRDTKVVQGIKNFL-DIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPE 362 (447)
T ss_pred EEecccccccchHHHHHHHHHH-hccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCC
Confidence 9876652112222223344333 34566899999999999997777888999999999999999999998 887 67889
Q ss_pred CccEEEEECC------CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFP------GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+++|+|+.+. -.++.++...|.++..+.+.||..|+. ++|+|+++..+.+.+++++.||+++.
T Consensus 363 g~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~--~nw~Ri~i~~~~~~leea~~Rik~Fc 431 (447)
T KOG0259|consen 363 GCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGL--KNWLRIVITVEEEMLEEAFSRIKEFC 431 (447)
T ss_pred cceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccC--CCeEEEEEccChHHHHHHHHHHHHHH
Confidence 9999999986 246778999999999999999999975 68999999999999999999999874
No 62
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.4e-46 Score=366.48 Aligned_cols=350 Identities=19% Similarity=0.273 Sum_probs=259.7
Q ss_pred CceEEecCCCCCC-CChH-HHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHH
Q 045431 63 AEVISLGIGDTTE-PIPE-VITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 63 ~~~i~l~~g~~~~-~~~~-~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~a 138 (433)
+++|+|+.|.|+. +.|. .+.+++.+.+...........|++..|.++||++||+|+++ ++++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 4689999999874 3333 44555555554321112346899999999999999999975 777899999999999999
Q ss_pred HHHH-HHhcC-----CCCEEEE-eCCCChhhhhhHHHhCCcccccccccccceEEEeecCccC-CcccCC---CCCCCcc
Q 045431 139 ISRL-QIVFG-----SNVTMAV-QDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN-GFFPDL---STVARTD 207 (433)
Q Consensus 139 l~~l-~~l~~-----~gd~Vl~-~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~ 207 (433)
+.++ ..++. +||.|++ ++|+|+.|.......+... . .....++.+.++ ++..++ +...+++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 181 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFV---S-----YRPNIELLPEGQFKYHVDFEHLHIDEDTG 181 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCcee---e-----cccccccccccccccCCCHHHcccCCCce
Confidence 9975 66664 6899999 7999999987655444210 0 011122222110 122222 2235778
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
+++++|||||||.++|.+++++|+++|++|+++||+||+|.++.......+.. +...+++|+++||||+ ++||+|+|
T Consensus 182 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~--~~~~~~vI~~~SfSK~-~~pGlRiG 258 (416)
T PRK09440 182 AICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEAT--PLWNPNIILCMSLSKL-GLPGVRCG 258 (416)
T ss_pred EEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcC--ccccCCeEEEeccccc-CCCcceEE
Confidence 99999999999999999999999999999999999999998542211001111 1124689999999997 78999999
Q ss_pred eeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHH-HHHHHHHHHHHHHHHHhhc----CC
Q 045431 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHE-VIGFYKENTDIIVETFNSL----GF 361 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~-~~~~~~~~~~~l~~~l~~~----g~ 361 (433)
|++++++++ +.+.........+++.+.|.++.+++++..+ .++.+ +++.|+++++.+.+.|++. ++
T Consensus 259 ~~i~~~~l~--------~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~ 330 (416)
T PRK09440 259 IVIADEEII--------EALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPC 330 (416)
T ss_pred EEeCCHHHH--------HHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence 999998885 6677666655566899999999999986554 44444 6888999999998888764 45
Q ss_pred eeecCCCccEEEEECCC--CChHHHHHHHHHcCCeEecCCCCCCCC-------CCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 362 KVYGGKNAPYVWVQFPG--RSSWDVFSEILEKTHVVTTPGSGFGPG-------GEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 362 ~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~-------~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.+..|.+|+|+|++++. .++.++...+ +++||.+.||+.|+.. +.+++||+++.+.+++++++++|++++
T Consensus 331 ~~~~p~gg~fiw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 331 LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEV 409 (416)
T ss_pred EEecCCCceEEEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHH
Confidence 66678899999999984 4556666655 5679999999998542 136899999778999999999999876
No 63
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-47 Score=360.73 Aligned_cols=323 Identities=18% Similarity=0.324 Sum_probs=262.0
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.++|+|+.|++++++|+.+.+++.+.+.. ...|+ ..|.++||+++|+++ ++++++|++|+|+++++.+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 29 PDDLVKLSSNENPHGPSPAAVEAIREAAER------VHSYP-KASHADLTAALADRW----DVSPEQVWLANGGDGALDY 97 (357)
T ss_pred ccceeEecCCCCCCCCCHHHHHHHHHHHhh------hhcCC-CCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHH
Confidence 446999999999998899999998887642 35674 578999999999998 7899999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC----CCCccEEEEcCCCC
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST----VARTDIIFFCSPNN 216 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~p~n 216 (433)
+..++++||.|++++|+|+.+.......| ..++.++.+.++++..+.+. ..++++|++|||||
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~k~i~l~~p~N 165 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYGMSARYHH------------GEVREYPVSKADDFEQTADTVLDAYDGERIVYLTSPHN 165 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHHcC------------CeEEEEecccCcCCCcCHHHHHHhhcCCcEEEEeCCCC
Confidence 57778999999999999998887777777 46777777654455444322 24689999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
|||.++|.+++++|+++|++ +++||+||+|.++.+++. .+..++ ..+++++++||||.+|++|+|+||++++++++
T Consensus 166 PTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~ 241 (357)
T PRK14809 166 PTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPS--AVALVE-ERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWA 241 (357)
T ss_pred CCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCch--hHHHHh-hCCCEEEEecchhHhcCcchhheeeecCHHHH
Confidence 99999999999999999875 789999999999876432 222222 24689999999999999999999999998885
Q ss_pred ccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEEC
Q 045431 297 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~ 376 (433)
+.+.+.. ...+.+.++|.++.+++++ ..++++.++.++++++.+.+.|+..++ +.+|+|+|+++
T Consensus 242 --------~~~~~~~--~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~~ 305 (357)
T PRK14809 242 --------DAYARVN--TPFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAEV 305 (357)
T ss_pred --------HHHHHhC--CCCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEEC
Confidence 5665543 2455788999989998874 467888899999999999999976422 46899999998
Q ss_pred CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 377 PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+ +..++...+ +++||.+.||..|+. +++|||++. +.+++++++++|+++++
T Consensus 306 ~--~~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 306 G--DASAVAEAA-QERGVIVRDCTSFGL--PECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred C--CHHHHHHHH-HHCCEEEEECccCCC--CCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 6 455666665 566999999999863 479999975 57899999999998874
No 64
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-46 Score=356.52 Aligned_cols=327 Identities=19% Similarity=0.355 Sum_probs=264.9
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQ 143 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~ 143 (433)
++++|+.|+++.++|+.+++++.+.+. ....|+ ..+.++||+++|+|+ ++++++|++|+|+++++.++.
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~------~~~~Y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~ 88 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLD------KLVEYP-DPDYLELRKRIASFE----QLDLENVILGNGATELIFNIV 88 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHH------hhhcCC-CccHHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHH
Confidence 479999999888889999999988763 245685 457899999999998 789999999999999999864
Q ss_pred HhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC--C-CC-CCCccEEEEcCCCCccc
Q 045431 144 IVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD--L-ST-VARTDIIFFCSPNNPTG 219 (433)
Q Consensus 144 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~i~l~~p~nPtG 219 (433)
..+.+ +.|++++|+|+.+...++..| .+++.++.+.++++..+ + +. ..++++++++|||||||
T Consensus 89 ~~~~~-~~v~i~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~P~NPtG 155 (354)
T PRK06358 89 KVTKP-KKVLILAPTFAEYERALKAFD------------AEIEYAELTEETNFAANEIVLEEIKEEIDLVFLCNPNNPTG 155 (354)
T ss_pred HHhCC-CcEEEecCChHHHHHHHHHcC------------CeeEEEeCccccCCCccHHHHHhhccCCCEEEEeCCCCCCC
Confidence 44554 689999999999999998888 47788887655444333 1 11 24689999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc-ccCCCCcceEEEecccccccccccceeeeeccc-cccc
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF-EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK-ELLF 297 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~-~~~~ 297 (433)
.+++.+++++|+++|++|+++||+||+|.+|.+++.+.+.. .++ ..+++|+++||||++|++|+|+||+++++ .++
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~- 233 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLE-NFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA- 233 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhcc-CCCCEEEEEechhhccCcchhheeeecCCHHHH-
Confidence 99999999999999999999999999999998876443333 333 34789999999999999999999999864 443
Q ss_pred cCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEEC
Q 045431 298 SDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~ 376 (433)
+.+.+... ....+.++|.++..++++ ..++++.++.++++++.+.+.|+++ |+.+..+ .|.|+|+++
T Consensus 234 -------~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~ 301 (354)
T PRK06358 234 -------EKLLQMRE--PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIFFKL 301 (354)
T ss_pred -------HHHHHhCC--CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEEEEc
Confidence 55555432 345789999999999863 3567888999999999999999987 7777766 567999999
Q ss_pred CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 377 PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+. ..++...+++ +||.+.||+.|+..+++++||++ .+.++.+++++.|++++
T Consensus 302 ~~--~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~-~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 302 EK--PIDLRKELLK-KGILIRSCSNYRGLDENYYRVAV-KSREDNKKLLKALEVIL 353 (354)
T ss_pred Cc--hHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHh
Confidence 74 3677777765 59999999999654568999996 67788888888888765
No 65
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=2e-46 Score=358.28 Aligned_cols=326 Identities=17% Similarity=0.265 Sum_probs=258.0
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL 142 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l 142 (433)
.++|+|+.+++++++|+.+.+++.+.+.. ...|++. +..+||++||+|+ ++++++|++|+|+++++.++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~------~~~Y~~~-~~~~Lr~aia~~~----~v~~~~I~it~G~~~~i~~~ 90 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA------LRHYPDP-DYRELRLALAQHH----QLPPEWILPGNGAAELLTWA 90 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH------hhcCCCc-CHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHH
Confidence 36899999999999999999998876642 4578654 5689999999998 78999999999999999986
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCc---ccCCCC----CCCccEEEEcCCC
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF---FPDLST----VARTDIIFFCSPN 215 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~i~l~~p~ 215 (433)
...+.+||.|++++|+|+.+...++..| .+++.++.+.++++ ..+++. ..++++++++|||
T Consensus 91 ~~~l~~g~~vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~ 158 (360)
T PRK07392 91 GRELAQLRAVYLITPAFGDYRRALRAFG------------ATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPH 158 (360)
T ss_pred HHHhCCCCeEEEECCCcHHHHHHHHHcC------------CeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCC
Confidence 4445678999999999999999999999 47888888765543 122221 2567899999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
||||.+++.++ |.++++++++ +|+||+|.+|.+++.+.++.......+++|+++||||++|++|+|+||+++++++
T Consensus 159 NPTG~~~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~ 234 (360)
T PRK07392 159 NPTGKLWSREA---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR 234 (360)
T ss_pred CCCCCCcCHHH---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH
Confidence 99999999655 5555667885 6669999999876543343322223468999999999999999999999999887
Q ss_pred cccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEE
Q 045431 296 LFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWV 374 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~ 374 (433)
+ +.+.... ....++.++|.++.+++++. .+.+..++.++++++.+.+.|+++ |+.+.+ .+++|+|+
T Consensus 235 ~--------~~~~~~~--~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~ 301 (360)
T PRK07392 235 L--------QRWQQWR--DPWPVNGLAAAAAIAALADR--DFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLV 301 (360)
T ss_pred H--------HHHHhhC--CCCCCCHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEE
Confidence 5 5555433 23568999999999999753 455677778999999999999987 777654 68999999
Q ss_pred ECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccC--hhHHHHHHHHHH
Q 045431 375 QFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGH--RGNVLEACKRFK 429 (433)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~--~~~l~~~l~~l~ 429 (433)
+++. ++.++...+++++||.+.||..|+..+++++||+++.+ .+++.++++++.
T Consensus 302 ~~~~-~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 302 QSQG-SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAIL 357 (360)
T ss_pred EcCC-CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9875 56777778777789999999999765678999998664 356777777653
No 66
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.2e-47 Score=365.57 Aligned_cols=340 Identities=18% Similarity=0.216 Sum_probs=260.3
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEE--EcCChHH
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIF--VSDGAKC 137 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~--~~~G~~~ 137 (433)
+++|+|+.|.| ++++|....+++.+++..........+|+++.|.++||+++++|+.+ +..+++++|+ .|.|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 46899999986 45566555666666653322114457899999999999999999975 2346889999 5999999
Q ss_pred HHHHH----HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C-----CCC
Q 045431 138 DISRL----QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T-----VAR 205 (433)
Q Consensus 138 al~~l----~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~ 205 (433)
++.++ ..+++|||+|++++|+|+.|...++.+| .+++.++..+++++..+++ + .++
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G------------~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~ 176 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAG------------LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNG 176 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcC------------CceeeccccCcccCCcCHHHHHHHHHhCCCC
Confidence 98864 2567999999999999999999999999 4788888743322333322 1 134
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC---CCCcccccCCCCcceEEEeccccccccc
Q 045431 206 TDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD---NPRSIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 206 ~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
+++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.+++ .+.++..+....+++|+++||||+++++
T Consensus 177 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~ 256 (404)
T PTZ00376 177 SVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLY 256 (404)
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccc
Confidence 5666678999999999999999999999999999999999999988864 1223444433346899999999999999
Q ss_pred ccceeee---eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-----hHHHHHHHHHHHHHHHHHH
Q 045431 283 GVRLGWT---VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-----KAVHEVIGFYKENTDIIVE 354 (433)
Q Consensus 283 G~r~G~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~ 354 (433)
|+|+||+ +++++++. ++.+.+.+.......+.+.++|.++..++++... .++++.+++++++++.+.+
T Consensus 257 GlRvG~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~ 332 (404)
T PTZ00376 257 GERIGALHIVCANKEEAA----NVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYD 332 (404)
T ss_pred ccccceEEEEeCCHHHHH----HHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 46666430 0112333323333444678999999999986431 3466778899999999999
Q ss_pred HHhhcC----CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec-cChhHHHHHHHHHH
Q 045431 355 TFNSLG----FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF-GHRGNVLEACKRFK 429 (433)
Q Consensus 355 ~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~l~~~l~~l~ 429 (433)
.|++++ +.+..|.+|+|+|++++ .++...|++++||.+.|| + |++++ .+.++++.++++|+
T Consensus 333 ~L~~~~~~~~~~~~~p~gg~f~~~~~~----~~~~~~L~~~~~v~v~p~--------~--Ris~~~~~~~~~~~~~~~l~ 398 (404)
T PTZ00376 333 ELKALGSPGDWEHIINQIGMFSFTGLT----KEQVERLIEKYHIYLLDN--------G--RISVAGLTSKNVDYVAEAIH 398 (404)
T ss_pred HHHhcCCCCcccccccCceEEEecCCC----HHHHHHHHHhCCEeecCC--------C--eEEEeccCHHhHHHHHHHHH
Confidence 999875 44567889999999985 477888888889999986 1 99996 69999999999999
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
+++
T Consensus 399 ~~~ 401 (404)
T PTZ00376 399 DVV 401 (404)
T ss_pred HHH
Confidence 876
No 67
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2e-46 Score=357.37 Aligned_cols=321 Identities=18% Similarity=0.333 Sum_probs=260.3
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
..++|+|+.|++++++|+.+.+++.+.+.. ...| +..|.++||+++|+|+ ++++++|++|+|+++++.+
T Consensus 28 ~~~~i~l~~nen~~~~~~~v~~a~~~~~~~------~~~Y-p~~g~~~Lr~aia~~~----~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 28 DHSFVKLASNENPFGCSPRVLDELQKSWLD------HALY-PDGGATTLRQTIANKL----HVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCceEEeCCCCCCCCCCHHHHHHHHHHHHh------cCcC-CCCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHH
Confidence 346899999999999999999999887643 1246 6779999999999998 8899999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCc
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNP 217 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nP 217 (433)
+..++++||+|++++|+|+.|...++..| .+++.++.+. +.++.+ ++. .++++++++||||||
T Consensus 97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g------------~~v~~v~~~~-~~~d~~~l~~~~~~~~~~v~i~~P~NP 163 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEG------------CEVKEVALNN-GVYDLDEISSVVDNDTKIVWICNPNNP 163 (366)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHHHcC------------CEEEEeecCC-CCcCHHHHHHHhCcCCcEEEEeCCCCC
Confidence 57778999999999999999999999998 4788888753 233222 221 257899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
||.+++.+++++|+++|++++ ++|+||+|.+|.+.+. +..+..++ ..+++|+++||||+||++|+|+||++++++++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~ 241 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLE-KHKNILVLRTFSKAYGLASFRVGYAVGHEELI 241 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhc-cCCCEEEEeCchHHhcChHHHHhHHhCCHHHH
Confidence 999999999999999998876 5677999998876542 22222232 24689999999999999999999999998875
Q ss_pred ccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEEC
Q 045431 297 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~ 376 (433)
+.+.+.. ..+..+.++|.++.++|++ ..++++.++.++++++++.+.++.+|+.+.++ .|+|+|+++
T Consensus 242 --------~~l~~~~--~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-~~nf~~~~~ 308 (366)
T PRK01533 242 --------EKLNVVR--LPFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-QTNFIFLPV 308 (366)
T ss_pred --------HHHHHhc--CCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-cCcEEEEeC
Confidence 6666544 2456899999999999974 45677888888999999999998889887765 788999998
Q ss_pred CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 377 PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+ +..++...++ ++||.+++ | ++++||++ .+.++.+.++++|++++
T Consensus 309 ~--~~~~~~~~l~-~~GI~Vr~---~----~~~iRis~-~~~~~~~~l~~al~~~~ 353 (366)
T PRK01533 309 E--NGGEIYEACA-HAGFIIRP---F----PNGVRITV-GTREQNEGVISVLQQHF 353 (366)
T ss_pred C--CHHHHHHHHH-HCCcEEcc---C----CCceEEeC-CCHHHHHHHHHHHHHHH
Confidence 6 3556666665 56999997 3 36899997 66788889999888765
No 68
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-45 Score=354.27 Aligned_cols=342 Identities=24% Similarity=0.379 Sum_probs=272.8
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~ 140 (433)
+++++|+.|.|++++|+.+.+++.+.+.... .....|++..|.+++|+++++++.+ +.++++++|++|+|+++++.
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~ 110 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEED--PGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALN 110 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCC--cCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHH
Confidence 4689999999888888899998888775432 3356898899999999999999975 66788999999999999999
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCccEEEEcCC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTDIIFFCSP 214 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~i~l~~p 214 (433)
+ +..++++||.|++++|+|..+...++..| .+++.++.+++ .+..+++ + .++++++++++|
T Consensus 111 ~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g------------~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p 177 (394)
T PRK06836 111 VALKAILNPGDEVIVFAPYFVEYRFYVDNHG------------GKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSP 177 (394)
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHHHHHHcC------------CEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCC
Confidence 7 57788999999999999999998888888 48888888654 1223322 2 357899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHH------cCCEEEEeccccccccCCC-CCcccccCCCCcceEEEeccccccccccccee
Q 045431 215 NNPTGAAATREQLTRLVQFAKD------NGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~------~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
|||||.++|.+++++|+++|++ |+++||+||+|.++.+++. ..++... .+++++++||||.+|+||+|+|
T Consensus 178 ~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~---~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 178 NNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKY---YDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHc---cCcEEEEecchhhccCcceeeE
Confidence 9999999999999999999999 8999999999999887653 2333222 4579999999999999999999
Q ss_pred eeeccccccccCCcchhHHHHHHHh-hccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecC
Q 045431 288 WTVIPKELLFSDGFPVAKDFNRIVC-TCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGG 366 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 366 (433)
|+++++.+.. ...+...+..... ......+.+.|.++..++++. ..++.++++++.+.+.|+++|+.+..+
T Consensus 255 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~g~~~~~~ 326 (394)
T PRK06836 255 YIAVNPEMED--ADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTELGFECVKP 326 (394)
T ss_pred EEecCHHHhh--hHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhCCCEeecC
Confidence 9999877631 0001111111111 112346788999888888752 125678889999999999999988888
Q ss_pred CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 367 KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 367 ~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
.+|+|+|++++..+..++...+ .++||.+.||..|+. .+++||+++.+++++++++++|+++++
T Consensus 327 ~gg~~~~~~~~~~~~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRi~~~~~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 327 QGAFYLFPKSPEEDDVAFCEKA-KKHNLLLVPGSGFGC--PGYFRLSYCVDTETIERSLPAFEKLAK 390 (394)
T ss_pred CceEEEEEeCCCCCHHHHHHHH-HhCCEEEECchhcCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 8999999999865666776554 566999999999864 579999998899999999999998863
No 69
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.9e-46 Score=360.67 Aligned_cols=336 Identities=18% Similarity=0.221 Sum_probs=256.1
Q ss_pred CceEEecCCCC---CCCCh--HHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-c-CCCCCCcE--EEcC
Q 045431 63 AEVISLGIGDT---TEPIP--EVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-D-LGIEEGDI--FVSD 133 (433)
Q Consensus 63 ~~~i~l~~g~~---~~~~~--~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~-~~~~~~~i--~~~~ 133 (433)
+++|+|+.|.| +..+| +.+.+++.+.+.. .....|++..|.++||+++++|+.+ + ..+++++| ++|+
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~----~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~ 101 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET----ETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTP 101 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc----ccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecC
Confidence 36899999963 33344 6777777776542 2345799999999999999999975 2 23478887 9999
Q ss_pred ChHHHHHHH-HHh--cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C----C
Q 045431 134 GAKCDISRL-QIV--FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T----V 203 (433)
Q Consensus 134 G~~~al~~l-~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~ 203 (433)
|+++++.++ ..+ ++|||+|++++|+|+.+...++..| .+++.++..+++++..+++ . .
T Consensus 102 Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g------------~~~v~v~~~~~~~~~~d~~~l~~~~~~~ 169 (396)
T PRK09257 102 GGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAG------------LEVKTYPYYDAATKGLDFDAMLADLSQA 169 (396)
T ss_pred CccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcC------------CcEEEEeccccccCccCHHHHHHHHHhC
Confidence 999999975 333 5899999999999999999999999 4788888732222233322 1 1
Q ss_pred -CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CC-CCcccccCCCCcceEEEeccccccc
Q 045431 204 -ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD-DN-PRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 204 -~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~-~~-~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
.+..++++++||||||.++|.+++++|+++|++|+++||+||+|.++.++ +. ..++.+++...+++|+++||||+++
T Consensus 170 ~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~ 249 (396)
T PRK09257 170 PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFG 249 (396)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCc
Confidence 22344455799999999999999999999999999999999999998764 22 3445455443568999999999999
Q ss_pred ccccceeeeec--c-ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC-----hhHHHHHHHHHHHHHHHH
Q 045431 281 FTGVRLGWTVI--P-KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG-----FKAVHEVIGFYKENTDII 352 (433)
Q Consensus 281 ~~G~r~G~l~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l 352 (433)
++|+|+||+++ + ++.+. ++...+..........++.+.|.++.+++.+.. .++++++++.++++++.+
T Consensus 250 ~~GlRiG~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l 325 (396)
T PRK09257 250 LYGERVGALSVVAEDAEEAD----RVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLL 325 (396)
T ss_pred cccccceeEEEEeCCHHHHH----HHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999984 2 23220 011333333333445568899999999998643 257888999999999999
Q ss_pred HHHHhhcC----CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec-cChhHHHHHHHH
Q 045431 353 VETFNSLG----FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF-GHRGNVLEACKR 427 (433)
Q Consensus 353 ~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~l~~~l~~ 427 (433)
.+.|++++ +.+..|++|+|+|++++ .+++.++++++||.+.|. + ||+++ .+++++++++++
T Consensus 326 ~~~L~~~~~~~~~~~~~p~gg~~~w~~l~----~~~~~~l~~~~~V~~~p~--------~--ri~~~~~~~~~i~~~~~~ 391 (396)
T PRK09257 326 VEALKAKGPSRDFDFIARQRGMFSYSGLT----PEQVDRLREEFGVYAVGS--------G--RINVAGLNESNIDYVAEA 391 (396)
T ss_pred HHHHHhcCCCCCcccccccceEEEecCCC----HHHHHHHHHcCCEEEcCC--------C--eEEEeeCCHHHHHHHHHH
Confidence 99999874 56777899999999985 356677888889999762 2 99996 699999999999
Q ss_pred HHHhh
Q 045431 428 FKHLY 432 (433)
Q Consensus 428 l~~~l 432 (433)
|++++
T Consensus 392 i~~~~ 396 (396)
T PRK09257 392 IAAVL 396 (396)
T ss_pred HHhhC
Confidence 99864
No 70
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.2e-45 Score=377.48 Aligned_cols=378 Identities=13% Similarity=0.181 Sum_probs=285.4
Q ss_pred cccccCCChhhHHHHHhccccccccccCCCCCCcHHHHHHHHHHHhcCCCCceEEecCCCCCCCChHHHHHHHHHHHhhc
Q 045431 13 VCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYAL 92 (433)
Q Consensus 13 l~~g~~LPs~r~la~~~~vs~~t~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~ 92 (433)
-++-.++|-.++.++..++|.++ .+.+.+ ........++.++|+|+.|+|++++|+.+.+++.+++.+.
T Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~----------~~~~~~~~~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~ 726 (1082)
T PLN02672 658 HTPQERLPEEEESSKFIGFSSSA-RSALKE----------AELSVSGSQESSLIHMDVDESFLPVPSAVKASIFESFVRQ 726 (1082)
T ss_pred CCCccccchhhhhHhhhCCCchh-HHHHHh----------cccCCcccCCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhc
Confidence 34566777777778777777544 111111 0000111234579999999999999999999999877532
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCC-CcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH
Q 045431 93 STQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEE-GDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI 168 (433)
Q Consensus 93 ~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~-~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~ 168 (433)
++ ..|.+++|+++++|+.+ ++..++ ++|++|+|+++++.+ +..+++|||.|++++|+|+.|...++.
T Consensus 727 -------~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~ 797 (1082)
T PLN02672 727 -------NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKF 797 (1082)
T ss_pred -------CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHH
Confidence 11 23678899999999986 444433 589999999999986 588899999999999999999999999
Q ss_pred hCCcccccccccccceEEEeecCccCCcccCCCC----C-C-CccEEEEcCCC-CccccCCCHHHHHHHHHHHHHcCCEE
Q 045431 169 MGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST----V-A-RTDIIFFCSPN-NPTGAAATREQLTRLVQFAKDNGSII 241 (433)
Q Consensus 169 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-~~~~i~l~~p~-nPtG~~~~~~~~~~i~~~a~~~~~~l 241 (433)
.| .+++.++.+.++++..+.+. . . +.++|+++||| ||||.+++.+++++|+++|++||++|
T Consensus 798 ~G------------a~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~V 865 (1082)
T PLN02672 798 LK------------ANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARV 865 (1082)
T ss_pred cC------------CEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEE
Confidence 99 48889998766677665322 1 2 34578999996 99999999999999999999999999
Q ss_pred EEeccccccccCCCCC---ccc----ccCCC--CcceEEEecccccccccccceeeeecccc-ccccCCcchhHHHHHHH
Q 045431 242 VYDSAYALYISDDNPR---SIF----EIPGA--KEVAIETSSFSKYAGFTGVRLGWTVIPKE-LLFSDGFPVAKDFNRIV 311 (433)
Q Consensus 242 i~De~~~~~~~~~~~~---~~~----~~~~~--~~~vi~i~S~sK~~~~~G~r~G~l~~~~~-~~~~~~~~~~~~~~~~~ 311 (433)
|+||+|+++.+++.+. ++. .++.. ..+|++++||||.++++|+|+||++++++ ++ +.+....
T Consensus 866 IsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi--------~~l~~~~ 937 (1082)
T PLN02672 866 IIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLI--------DAFHSAP 937 (1082)
T ss_pred EEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHH--------HHHHHhh
Confidence 9999999888865321 111 12211 23799999999999999999999999766 53 5555433
Q ss_pred hhccC-CCcHHHHHHHHHhcC--cCCh-hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC----------
Q 045431 312 CTCFN-GASNISQAGGLACLS--PEGF-KAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP---------- 377 (433)
Q Consensus 312 ~~~~~-~~~~~~q~~~~~~l~--~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~---------- 377 (433)
..... ..+..++.++.+++. +..+ .++++.++.++++++++.+.|+++|+.+.+|.+|+|+|++++
T Consensus 938 ~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~ 1017 (1082)
T PLN02672 938 GLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLK 1017 (1082)
T ss_pred hhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEcccccccccccc
Confidence 22221 122333333334342 2222 567888899999999999999999999999999999999763
Q ss_pred --------CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 378 --------GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 378 --------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+.++.++...+++++||.+.||..|+. ++++||+++.+++++++++++|++++
T Consensus 1018 ~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~--~g~~RIsfa~~~e~LeeALerL~kf~ 1078 (1082)
T PLN02672 1018 SIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI--PGYCRFSFALEDSEFDRALKAIARFK 1078 (1082)
T ss_pred ccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 125677888888888999999988764 67999999889999999999999865
No 71
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.3e-45 Score=358.56 Aligned_cols=342 Identities=19% Similarity=0.280 Sum_probs=258.9
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHH-HHhcc--CC-CCCC--cEEEcCChHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIAS-TFYKD--LG-IEEG--DIFVSDGAKC 137 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~-~l~~~--~~-~~~~--~i~~~~G~~~ 137 (433)
++|+++.|+|++++++.+ .++.+.+.. . +|+++.|..++++++++ |+.+. .. .+++ +|++|+|+++
T Consensus 95 ~~i~l~~g~p~~~~~~~~-~~~~~~~~~----~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFL-YEMCDGIIG----D---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHhhcCCCCCCCCCHHH-HHHHHHhhc----C---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 479999999999866554 555555421 1 58778888888888885 55542 22 2344 8999999999
Q ss_pred HHHH-HHH-----hcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCC-----cccCCC---C-
Q 045431 138 DISR-LQI-----VFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENG-----FFPDLS---T- 202 (433)
Q Consensus 138 al~~-l~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~- 202 (433)
++.. +.+ ++.|||+|++++|+|+.|...+...+.. ..++.++.+.+++ |..+.+ +
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g----------~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYD----------FEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCC----------cEEEEeecccccccccccCCCCHHHHHHh
Confidence 9987 444 6899999999999999999988876421 3566666654322 444322 2
Q ss_pred -CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc--CCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc
Q 045431 203 -VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDN--GSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA 279 (433)
Q Consensus 203 -~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~ 279 (433)
.+++|+|+++|||||||.++|.+++++|+++|++| +++||+||+|.+|.+ .+.++.+. .++++|+++||||.|
T Consensus 237 ~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl~~~--~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 237 RDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSLFAE--LPYNTIGVYSFSKYF 312 (521)
T ss_pred cCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccchhhh--CCCCEEEEEcchhhc
Confidence 36899999999999999999999999999999987 899999999998875 24455444 356899999999999
Q ss_pred cccccceeeeecccccccc-----C------------------------CcchhHHHHHHHhhccCCCcHHHHH-----H
Q 045431 280 GFTGVRLGWTVIPKELLFS-----D------------------------GFPVAKDFNRIVCTCFNGASNISQA-----G 325 (433)
Q Consensus 280 ~~~G~r~G~l~~~~~~~~~-----~------------------------~~~~~~~~~~~~~~~~~~~~~~~q~-----~ 325 (433)
|++|||+||++++++.+.+ - ..++.++.+.+......+.+.+.|. +
T Consensus 313 g~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a 392 (521)
T TIGR03801 313 GATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFS 392 (521)
T ss_pred cCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHH
Confidence 9999999999998762210 0 0111223344455555667788776 3
Q ss_pred HHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCe--eecCCCccEEEEECCCC-----------------ChHHHHH
Q 045431 326 GLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFK--VYGGKNAPYVWVQFPGR-----------------SSWDVFS 386 (433)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--~~~~~~g~~~~~~~~~~-----------------~~~~~~~ 386 (433)
+.++++ ....+.+.+++.+++|++.+.+.| |+. ..++.+++|+|++++.. ++.+++.
T Consensus 393 ~~all~-~~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~ 468 (521)
T TIGR03801 393 LFALMD-KENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLF 468 (521)
T ss_pred HHHHhc-cchhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHH
Confidence 444554 344678999999999999999988 444 34578899999999731 4678899
Q ss_pred HHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHHHHHHHHHHHhh
Q 045431 387 EILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNVLEACKRFKHLY 432 (433)
Q Consensus 387 ~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~l 432 (433)
+|++++||.+.||..|+.. ++++|+|+++ ++++++++.++|++++
T Consensus 469 ~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~ 514 (521)
T TIGR03801 469 RLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKIL 514 (521)
T ss_pred HHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999853 5789999974 8899999999999875
No 72
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-45 Score=347.69 Aligned_cols=326 Identities=19% Similarity=0.289 Sum_probs=259.7
Q ss_pred CCCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 60 YPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 60 ~~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
+.+.+++||+.+++++++|+.+.+++.+.+.. ...|++..|.++||+++++|+ ++++++|++|+|+++++
T Consensus 19 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~aia~~~----~~~~~~I~it~Ga~~al 88 (349)
T PRK07908 19 DAGPGLLDFAVNVRHDTPPEWLRERLAARLGD------LAAYPSTEDERRARAAVAARH----GRTPDEVLLLAGAAEGF 88 (349)
T ss_pred cCCCCeEEecCCCCCCCCCHHHHHHHHHHhhH------hhcCCCccchHHHHHHHHHHh----CcChhhEEECCCHHHHH
Confidence 33567999999999999999999999997743 356877889999999999998 78999999999999999
Q ss_pred HHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-CCCccEEEEcCCCCcc
Q 045431 140 SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-VARTDIIFFCSPNNPT 218 (433)
Q Consensus 140 ~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~p~nPt 218 (433)
.++.. +++| .++++.|+|..+...++..| .+++.++.+.+.+ .+.+. .+++++++++||||||
T Consensus 89 ~~~~~-l~~~-~viv~~P~y~~~~~~~~~~G------------~~i~~v~~~~~~~--~d~~~l~~~~~~i~l~np~NPT 152 (349)
T PRK07908 89 ALLAR-LRPR-RAAVVHPSFTEPEAALRAAG------------IPVHRVVLDPPFR--LDPAAVPDDADLVVIGNPTNPT 152 (349)
T ss_pred HHHHh-cCCC-eEEEeCCCChHHHHHHHHcC------------CEEEeeccCcccC--cChhHhccCCCEEEEcCCCCCC
Confidence 98655 6775 67778999999998888888 4788888865423 23222 2578899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccccc
Q 045431 219 GAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 219 G~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~ 298 (433)
|.++|.+++ .++|+ ++.++|+||+|+++.. +.+.++.+.+ .+++++++||||++|++|+|+||++++++++
T Consensus 153 G~~~~~~~l---~~l~~-~~~~iIvDe~y~~~~~-~~~~~l~~~~--~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~-- 223 (349)
T PRK07908 153 SVLHPAEQL---LALRR-PGRILVVDEAFADAVP-GEPESLAGDD--LPGVLVLRSLTKTWSLAGLRVGYALGAPDVL-- 223 (349)
T ss_pred CCCcCHHHH---HHHHh-cCCEEEEECcchhhcc-CCcccccccc--CCCEEEEeecccccCCccceeeeeecCHHHH--
Confidence 999997655 45555 4788999999998754 3344554432 3579999999999999999999999998875
Q ss_pred CCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC
Q 045431 299 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG 378 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~ 378 (433)
+.+..... .+..+.+.|.++.+++.....+++++.+++++++++.+.+.|+++|+.+..|.+|+|+|+++++
T Consensus 224 ------~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~ 295 (349)
T PRK07908 224 ------ARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD 295 (349)
T ss_pred ------HHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc
Confidence 55554332 2446777888777777744457888999999999999999999888888888899999999984
Q ss_pred CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 379 RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 379 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
. +.+..+++++||.+.||..|+..++++|||++ .++++++++++.|++++
T Consensus 296 --~-~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~-~~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 296 --A-ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV-RPRAEVPVLVQALAEIL 345 (349)
T ss_pred --H-HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe-CCCccHHHHHHHHHHHH
Confidence 3 34445556779999999998654578999999 56778888888887765
No 73
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1e-45 Score=349.05 Aligned_cols=315 Identities=15% Similarity=0.258 Sum_probs=246.7
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQ 143 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~ 143 (433)
.+|+|+.++++++.. .....| |..-..+||+++|+|+ ++++++|++|+|+++++.++.
T Consensus 17 ~~i~l~~Nenp~~~~-----------------~~~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~it~Gs~~~l~~~~ 74 (332)
T PRK06425 17 RIIDFSANINDFMDI-----------------GDISIY-PEISYTDIEDQIKIYT----QGLKIKVLIGPGLTHFIYRLL 74 (332)
T ss_pred CEEEeccccCCCcCh-----------------hhcccC-cCcCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHH
Confidence 589999999876310 223457 4556899999999998 889999999999999999865
Q ss_pred HhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCC
Q 045431 144 IVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAAT 223 (433)
Q Consensus 144 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~ 223 (433)
.++++| .|++++|+|+.|...++..| .+++.+|.+.. +.+.+..+..+++++++||||||||.++|
T Consensus 75 ~~~~~~-~vv~~~P~y~~y~~~~~~~G------------~~v~~vp~~~~-~~~~~~l~~~~~k~v~l~nP~NPTG~~~s 140 (332)
T PRK06425 75 SYINVG-NIIIVEPNFNEYKGYAFTHG------------IRISALPFNLI-NNNPEILNNYNFDLIFIVSPDNPLGNLIS 140 (332)
T ss_pred HHhCCC-cEEEeCCChHHHHHHHHHcC------------CeEEEEeCCcc-cCcHHHHhhcCCCEEEEeCCCCCcCCccC
Confidence 567887 47777999999999999999 47888888642 22222222348899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
.+++++|+++|++|+++||+||+|.+|.+++. .+...+....+++|+++||||++|+||+|+||++++++++
T Consensus 141 ~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li------- 212 (332)
T PRK06425 141 RDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNM------- 212 (332)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHH-------
Confidence 99999999999999999999999999876542 2333333334689999999999999999999999998885
Q ss_pred hHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChH
Q 045431 304 AKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSW 382 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~ 382 (433)
+.+.+... .+..+.+++. ++..... .++++.++.++++++.+.+.|+++|+.+..+.+|+|+|++++ ++.
T Consensus 213 -~~l~~~~~--~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~--~~~ 283 (332)
T PRK06425 213 -KISRKITE--PWSVCDPAID----FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFMIP--DAH 283 (332)
T ss_pred -HHHHHcCC--CCccCHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEEcC--CHH
Confidence 55554322 2223333332 2322222 466788999999999999999999988765568899999987 567
Q ss_pred HHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 383 DVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 383 ~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
++.+.+++ +||.++||..|+..+++++||++. +.++.+.++++|++++.
T Consensus 284 ~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~ 332 (332)
T PRK06425 284 DFYSYLLK-NGILVRLLDDYECLGEQYIRIAIR-RRSFNIKLVNALRNFLN 332 (332)
T ss_pred HHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhC
Confidence 77777776 499999999997555689999984 57799999999988763
No 74
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-45 Score=349.74 Aligned_cols=324 Identities=17% Similarity=0.237 Sum_probs=253.9
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc----cCCCCCCcEEEcCChHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK----DLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~----~~~~~~~~i~~~~G~~~al 139 (433)
.+++|+.|+|++++|+.+.+++.+++... .....| +..|.++||++||+|+.+ ++.+++++|++|+|+++++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQG---IESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhc---ccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 48999999999999999999999876531 123468 457999999999999975 3458899999999999999
Q ss_pred HH-HHHhcCCCC-EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC------C---CCccE
Q 045431 140 SR-LQIVFGSNV-TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST------V---ARTDI 208 (433)
Q Consensus 140 ~~-l~~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~ 208 (433)
.. +..++.+|| .|++++|+|+.+...++..| .+++.++.+.+ ++..+++. . .++++
T Consensus 105 ~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g------------~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~~~k~ 171 (374)
T PRK02610 105 RSLLIATCLGGEGSILVAEPTFSMYGILAQTLG------------IPVVRVGRDPE-TFEIDLAAAQSAIEQTQNPPVRV 171 (374)
T ss_pred HHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcC------------CEEEEecCCcc-cCCCCHHHHHHHHHhhcCCCceE
Confidence 86 567777886 89999999999999999999 47888887542 23333221 1 47899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
|++||||||||.+++.+++++|++++ ++++||+||+|.+|.+.. .+..+.. .+++|+++||||++|+||+|+||
T Consensus 172 i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~---~~~~~~~-~~~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 172 VFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT---LVGELAQ-HPNWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc---hHHHHhc-CCCEEEEEecchhccCcccceee
Confidence 99999999999999999999999976 499999999999886432 1222322 35688999999999999999999
Q ss_pred eeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCC
Q 045431 289 TVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGK 367 (433)
Q Consensus 289 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~ 367 (433)
++++++++ +.+.+.. .....+.++|.++..++++. ..+.+.+++.+++ ++.+.+.|+++ ++.+. |+
T Consensus 246 ~v~~~~l~--------~~l~~~~--~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~-p~ 312 (374)
T PRK02610 246 AIGHPELI--------AVLEKVR--LPYNLPSFSQLAAQLALEHR-QELLAAIPEILQE-RDRLYQALQELPQLRVW-PS 312 (374)
T ss_pred eecCHHHH--------HHHHHhc--CCCCCCHHHHHHHHHHhcCH-HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC-CC
Confidence 99998875 5665544 23457889999998888743 3456666655554 67788889877 66654 67
Q ss_pred CccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+|+|+|++++. .++.++...+ .++||.+.++ .+++||++.. .+++++++++|++++
T Consensus 313 ~g~f~~~~l~~~~~~~~~~~~l-~~~gi~v~~~-------~~~lRls~~~-~~~~~~~l~~l~~~l 369 (374)
T PRK02610 313 AANFLYLRLSQDAALAALHQAL-KAQGTLVRHT-------GGGLRITIGT-PEENQRTLERLQAAL 369 (374)
T ss_pred cceEEEEeCCCCCCHHHHHHHH-HHCCEEEEeC-------CCeEEEeCCC-HHHHHHHHHHHHHHH
Confidence 89999999984 3556666665 5569999753 4689999864 567899999999876
No 75
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-44 Score=344.79 Aligned_cols=328 Identities=15% Similarity=0.230 Sum_probs=261.2
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.++|+|+.|++++++|+.+.+++.+.+.. ...|++ .+..+||+++|+++ ++++++|++|+|+++++.+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~------~~~y~~-~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~ 87 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNLDC------AERYPD-VEYRHLHQALARHH----QVPASWILAGNGETESIFA 87 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHHHh------cccCcC-ccHHHHHHHHHHHh----CcChhhEEECCCHHHHHHH
Confidence 346899999999999999999999887653 235754 57899999999998 7899999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC--C--CCCccEEEEcCCCCc
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS--T--VARTDIIFFCSPNNP 217 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~i~l~~p~nP 217 (433)
+...+.+|+ +++++|+|..+...++..| .+++.++.+.++++..+.+ + .+++++++++|||||
T Consensus 88 ~~~~l~~g~-viv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NP 154 (356)
T PRK08056 88 VVSGLKPRR-AMIVTPGFAEYRRALQQVG------------CEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNP 154 (356)
T ss_pred HHHHhCCCC-EEEeCCCcHHHHHHHHHcC------------CeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCC
Confidence 644457776 7778999999999999988 4788888865555544411 1 368899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeeccc-cc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK-EL 295 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~-~~ 295 (433)
||.+++.+++++|+++|++++++||+||+|.++.+++. ..+. +.. .+++++++||||++|++|+|+||+++++ .+
T Consensus 155 TG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~-~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~ 231 (356)
T PRK08056 155 TGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LAD-NPHLWVLRSLTKFYAIPGLRLGYLVNSDDAA 231 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hcc-CCCEEEEEechhhccCcchhheeeecCCHHH
Confidence 99999999999999999999999999999999876542 2222 222 3578999999999999999999999864 44
Q ss_pred cccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEE
Q 045431 296 LFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWV 374 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~ 374 (433)
+ +.+... .....++.++|.++..++++ ..+.++.++.++++++.+.+.|+++ ++.+.+ .+|+|+|+
T Consensus 232 ~--------~~l~~~--~~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~ 298 (356)
T PRK08056 232 V--------ARMRRQ--QMPWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLTVWP-GRANYLFL 298 (356)
T ss_pred H--------HHHHHh--CCCCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC-CCCcEEEE
Confidence 3 445432 23345778899988888863 3567888899999999999999887 777655 47899999
Q ss_pred ECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 375 QFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+++. +..++...+++ +||.+++|..|...+.++|||++. +.++.+.+++.|++++
T Consensus 299 ~~~~-~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 299 RCER-PDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR-SAAENERLLAALRNVL 353 (356)
T ss_pred EcCC-ChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHHH
Confidence 9974 35567777665 599999999996555679999984 5677778888877765
No 76
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-45 Score=349.50 Aligned_cols=325 Identities=18% Similarity=0.331 Sum_probs=263.5
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
++|+|+.|++++++++.+.+++.+.+.. ..|.+..|.++||+++|+++ ++++++|++|+|+++++.+ +
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-------~~~~p~~g~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~ 98 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-------LALYPDGYAPELRTKVAKHL----GVDEEQLLFGAGLDEVIQMIS 98 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-------hhcCCCCcHHHHHHHHHHHh----CCCHHHEEECCCHHHHHHHHH
Confidence 6899999999888888899998887642 24557789999999999998 7889999999999999987 4
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccc
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTG 219 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG 219 (433)
..++++||.|++++|+|+.+...+...| .++..++.+ +...+.+ +++ .+++++++++|||||||
T Consensus 99 ~~~~~~gd~v~~~~p~y~~~~~~~~~~g------------~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG 165 (359)
T PRK03158 99 RALLNPGTNTVMAEPTFSQYRHNAIIEG------------AEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTG 165 (359)
T ss_pred HHHhCCCCEEEEcCCCHHHHHHHHHHcC------------CeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 6788999999999999999998888888 477788876 2232221 211 25789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecccccccc
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~ 298 (433)
.+++.+++.++++.|+ ++++||+||+|.++.+++. +..+...+ ..+++++++||||.+|++|+|+||++++++++
T Consensus 166 ~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~-- 241 (359)
T PRK03158 166 TYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLE-KYENLIVLRTFSKAYGLAALRVGYGIASEELI-- 241 (359)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHH-hcCCEEEEEechHhhcCcchhhehhcCCHHHH--
Confidence 9999999999888774 6999999999999877643 22222232 24689999999999999999999999998885
Q ss_pred CCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC
Q 045431 299 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG 378 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~ 378 (433)
+.+.+... ...++.++|.++.+++++ ..++++.++.++++++.+.+.|+++|+.+.+ .+|+|+|++++
T Consensus 242 ------~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~i~~~~~- 309 (359)
T PRK03158 242 ------EKLNIARP--PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYP-SQTNFIFVDTG- 309 (359)
T ss_pred ------HHHHHhcC--CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCC-CcCcEEEEECC-
Confidence 56655432 345899999999999974 3567788888999999999999988887765 57899999985
Q ss_pred CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 379 RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 379 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.++.++...+++ +||.+.||..|+. ++++||++. +.++++.++++|++++
T Consensus 310 ~~~~~~~~~l~~-~gv~v~~g~~f~~--~~~iRi~~~-~~~~~~~l~~al~~~~ 359 (359)
T PRK03158 310 RDANELFEALLK-KGYIVRSGAALGF--PTGVRITIG-LKEQNDKIIELLKELL 359 (359)
T ss_pred CCHHHHHHHHHH-CCeEEeeCCCCCC--CCeEEEecC-CHHHHHHHHHHHHHhC
Confidence 356677777765 5999999999863 579999974 7889999999998763
No 77
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=7.4e-46 Score=355.87 Aligned_cols=336 Identities=28% Similarity=0.474 Sum_probs=274.0
Q ss_pred ceEEecCCCCCCC----ChHHHHHHHHH-HHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCC-cEEEcCCh
Q 045431 64 EVISLGIGDTTEP----IPEVITSALAK-RSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEG-DIFVSDGA 135 (433)
Q Consensus 64 ~~i~l~~g~~~~~----~~~~~~~a~~~-~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~-~i~~~~G~ 135 (433)
++|+|+.|+++.. +++...+++.+ .... .....|+++.|.++||+++|+|+.+ ++.++++ +|++++|+
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~ 77 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATS----SSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGA 77 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHH----TGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcc----cccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccc
Confidence 5899999999765 45555555554 2221 5677999999999999999999984 6667888 99999999
Q ss_pred HHHHHHH-HHh-cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CC----
Q 045431 136 KCDISRL-QIV-FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VA---- 204 (433)
Q Consensus 136 ~~al~~l-~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---- 204 (433)
++++.++ ..+ .++||.|++++|+|+.+...++..| .+++.++.+.+.++..+++. .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 78 QAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLG------------AEVIPVPLDSENDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp HHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTT------------SEEEEEEEEETTTTEETHHHHHHHHHTSHTT
T ss_pred ccchhhhhhcccccccccceecCCccccccccccccC------------ceeeecccccccccccccccccccccccccc
Confidence 9999985 555 5799999999999999999999999 47778886544444444321 11
Q ss_pred --CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCc-ccccCCCCcceEEEeccccccc
Q 045431 205 --RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRS-IFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 205 --~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~-~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
+++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+... ..+ ...++. ..++++++||||.+|
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g 224 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDE-DDNVIVVGSLSKSFG 224 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTT-TSTEEEEEESTTTTT
T ss_pred ccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccc-cccceeeeecccccc
Confidence 568899999999999999999999999999999999999999999888754 222 334433 345899999999999
Q ss_pred ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh--hHHHHHHHHHHHHHHHHHHHHhh
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF--KAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
++|+|+||++++++++ +.+.+....... +.+.|.++.+++.+... ++++++++.++++++.+.+.|++
T Consensus 225 ~~GlRvG~i~~~~~~~--------~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 294 (363)
T PF00155_consen 225 LPGLRVGYIVAPPELI--------ERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEE 294 (363)
T ss_dssp SGGGTEEEEEEEHHHH--------HHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhhh--------hhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Confidence 9999999999988774 666665544333 78888888888886554 38899999999999999999999
Q ss_pred cCCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee-ccChhHHHHHHHHH
Q 045431 359 LGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA-FGHRGNVLEACKRF 428 (433)
Q Consensus 359 ~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~-~~~~~~l~~~l~~l 428 (433)
.|+.+.++.+|+|+|+.++..++.++.++|++++||.+.||..|+. +++||+++ ..+++++++++++|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 295 IGITVLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp TTSEEEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred hhhheeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 9999998889999999998545678888988877999999999887 78999999 66999999999986
No 78
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-43 Score=342.15 Aligned_cols=336 Identities=21% Similarity=0.310 Sum_probs=269.4
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.++|+|+.+++++++++.+.+++.+.+.. .....|+++.|.++||+++|+++ ++++++|++|+|+++++.+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l----~~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEE----GEYCKYPPPEGFPELRELILKDL----GLDDDEALITAGATESLYL 98 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCcchHHHHHHHHHhc----CCCCCcEEEeCCHHHHHHH
Confidence 346999999999999999999999998863 33567888889999999999997 7889999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCc-cCCcccCCC---C--CCCccEEEEcCC
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTA-ENGFFPDLS---T--VARTDIIFFCSP 214 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~--~~~~~~i~l~~p 214 (433)
+..++.+||+|++++|+|..+...++..| ..++.++.+. ++++..+++ . .+++++++++||
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p 166 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFG------------AEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDP 166 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHHhC------------ceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCC
Confidence 57778999999999999999888888888 4777777642 223333322 1 357889999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
|||||.+++.+++++|+++|++||+++|+||+|.+|..+. .+...++ +++++++.||||++|++|+|+||++++++
T Consensus 167 ~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~--~~~~i~~~s~SK~~g~~G~RiG~i~~~~~ 242 (380)
T PRK06225 167 LNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH--TLAAEYA--PEHTVTSYSFSKIFGMAGLRIGAVVATPD 242 (380)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC--CchhhcC--CCCEEEEeechhhcCCccceeEEEecCHH
Confidence 9999999999999999999999999999999998875432 2222332 46789999999999999999999999988
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCee-ecCCCccEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKV-YGGKNAPYV 372 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~-~~~~~g~~~ 372 (433)
++ +.+.... ....+.+.++|.++.+++... ..++++.++.++++++.+.+.|+++ |+.+ ..+.+|+|+
T Consensus 243 l~--------~~~~~~~-~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 312 (380)
T PRK06225 243 LI--------EVVKSIV-INDLGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMM 312 (380)
T ss_pred HH--------HHHHHHH-hcccCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEE
Confidence 75 5555443 234557889999888888742 3567788888888899999999885 5432 234678899
Q ss_pred EEECC--CCChHHHHHHHHHcCCeEecCCCCCCC-CCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 373 WVQFP--GRSSWDVFSEILEKTHVVTTPGSGFGP-GGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
|+.++ +.+..++...+. ++||.+.||..|+. .+++++|+++..+++++++++++|++++
T Consensus 313 ~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 313 VIDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVV 374 (380)
T ss_pred EEEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHH
Confidence 99986 346677777776 55999999987753 2467999999888999999999999876
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-44 Score=345.28 Aligned_cols=326 Identities=24% Similarity=0.363 Sum_probs=254.9
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
.+++|+|+.|.+++.+|+.+.+++.+... ....|++..| .+||+++|+++ ++++++|++|+|+++++.+
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~~------~~~~Y~~~~g-~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~ 103 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIAE------LLRLYPDPQG-RALREAIAART----GVPADRIILGNGSEDLIAV 103 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHHH------HhhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHH
Confidence 44689999999988888888888877542 2457888788 49999999997 7889999999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCc
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNP 217 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nP 217 (433)
+..++++||.|++++|+|+.+...++..| .+++.++.+.+.++..+ ++. .+++++++++|||||
T Consensus 104 ~~~~~~~~gd~vli~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NP 171 (371)
T PRK05166 104 ICRAVLRPGDRVVTLYPSFPLHEDYPTMMG------------ARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNP 171 (371)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcC------------CeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCC
Confidence 47778999999999999999998888888 47888888654343322 221 257799999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc-cCCCCcceEEEecccccccccccceeeeecc-ccc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE-IPGAKEVAIETSSFSKYAGFTGVRLGWTVIP-KEL 295 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~-~~~ 295 (433)
||.+++.+++++|+++|++ +++||+||+|.++.+++...+... ++...+++|+++||||.+|++|+|+||++++ +++
T Consensus 172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l 250 (371)
T PRK05166 172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPEL 250 (371)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHH
Confidence 9999999999999999874 899999999999886543333332 2222457999999999999999999998864 444
Q ss_pred cccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEE
Q 045431 296 LFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQ 375 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~ 375 (433)
+ +.+.+.. ...+++.++|.++.+++.+. .++++.++.++++++.+.+.|+++|+.+. +.+|+|+|++
T Consensus 251 ~--------~~~~~~~--~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~-p~~g~fl~~~ 317 (371)
T PRK05166 251 V--------GLLDRVR--TPFNVNGAAQAAALAALDDE--EHLAKGVALALAERERLKKELAEMGYRIA-PSRANFLFFD 317 (371)
T ss_pred H--------HHHHHhc--cCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCcCeeC-CCcCCEEEEe
Confidence 3 5555433 23457889998888888743 56888889999999999999999888764 4678999999
Q ss_pred CCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccC--hhHHHHHHHHH
Q 045431 376 FPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGH--RGNVLEACKRF 428 (433)
Q Consensus 376 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~--~~~l~~~l~~l 428 (433)
++. ++.++...++++ ||.+.||..++ .+++|||++... .+.+.++++++
T Consensus 318 ~~~-~~~~l~~~l~~~-gi~v~p~~~~~--~~~~iRi~~~~~~~~~~l~~~l~~i 368 (371)
T PRK05166 318 ARR-PASAVAEALLRQ-GVIVKPWKQPG--FETFIRVSIGSPEENDHFVAALDKV 368 (371)
T ss_pred CCC-CHHHHHHHHHHC-CeEEecCCCCC--CCCeEEEEcCCHHHHHHHHHHHHHH
Confidence 863 466777777665 99999997643 468999998642 34455555444
No 80
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-44 Score=343.74 Aligned_cols=324 Identities=18% Similarity=0.274 Sum_probs=260.2
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH-
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL- 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l- 142 (433)
..|+|+.|++++++|+.+.+++.+.+.. ...|+++ +.++||++||+++ ++++++|++|+|+++++.++
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~------~~~Y~~~-~~~~Lr~~ia~~~----~~~~~~I~it~G~~~~l~~~~ 101 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAE------IWKYGDP-ENHDLRHALAAHH----GVAPENIMVGEGIDGLLGLIV 101 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHH------hhcCCCC-ccHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence 3579999999999999999999887632 2468655 5899999999998 78999999999999999985
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---CCCCccEEEEcCCCCccc
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---TVARTDIIFFCSPNNPTG 219 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~l~~p~nPtG 219 (433)
..++++||.|++++|+|+.+...+...| .+++.+|.+.+.....++. ...++++++++|||||||
T Consensus 102 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG 169 (369)
T PRK08153 102 RLYVEPGDPVVTSLGAYPTFNYHVAGFG------------GRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMG 169 (369)
T ss_pred HHhcCCCCEEEECCCcchHHHHHHHHcC------------CeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCC
Confidence 6678999999999999999998888888 4777888754421111121 125789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
.++|.+++++|+++|+ ++++||+||+|.++.+++...++.. ..+++|+++||||++|++|+|+||++++++++
T Consensus 170 ~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~---~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~--- 242 (369)
T PRK08153 170 SWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDT---DDPNVIRMRTFSKAYGLAGARVGYAIGAPGTI--- 242 (369)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcccchhhhh---cCCCEEEEecchHhccCcchheeeeecCHHHH---
Confidence 9999999999999887 4999999999999877653333322 24579999999999999999999999998875
Q ss_pred CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC-
Q 045431 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG- 378 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~- 378 (433)
+.+.+... ..+.+.++|.++.+++++ .+++++.++.++++++.+.+.|++.|+.+. |.+++|+|++++.
T Consensus 243 -----~~l~~~~~--~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~~~ 312 (369)
T PRK08153 243 -----KAFDKVRN--HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCGRD 312 (369)
T ss_pred -----HHHHHhhc--CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECCCC
Confidence 56665443 355899999999999974 356788899999999999999998888755 5789999999862
Q ss_pred -CChHHHHHHHHHcCCeEec-CCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 379 -RSSWDVFSEILEKTHVVTT-PGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 379 -~~~~~~~~~l~~~~gi~v~-~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
....++.+++++ +||.++ ||.. ..++++||++. ++++++.+++.|++++
T Consensus 313 ~~~a~~l~~~l~~-~Gi~v~~p~~~---~~~~~iRis~~-~~~~~~~~~~al~~~~ 363 (369)
T PRK08153 313 GAFARAVLDGLIA-RDIFVRMPGVA---PLDRCIRVSCG-PDEELDLFAEALPEAL 363 (369)
T ss_pred cccHHHHHHHHHH-CCeEEeeCCCC---CCCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 345566666665 599995 6542 23579999986 7889999999998875
No 81
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=3.7e-44 Score=342.65 Aligned_cols=323 Identities=20% Similarity=0.285 Sum_probs=257.4
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR- 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~- 141 (433)
++.|+|+.|++++++|+.+.+++.+.+.. ...|++. +.++||+++++++ ++++++|++|+|+++++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~Y~~~-~~~~Lr~aia~~~----~v~~e~I~it~Gs~~ai~~~ 111 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL------SGRYDLE-LEDDLRTLFAAQE----GLPADHVMAYAGSSEPLNYA 111 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH------hcCCCCc-hHHHHHHHHHHHh----CcChhhEEEcCChHHHHHHH
Confidence 46899999999999999999999887643 1357544 5999999999997 8899999999999999997
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CC-CCCCccEEEEcCCCCccc
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LS-TVARTDIIFFCSPNNPTG 219 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~l~~p~nPtG 219 (433)
+..++++||+|++++|+|+.+...++..| .+++.++.+.+..++.+ ++ ..++++++++||||||||
T Consensus 112 ~~~l~~~gd~Vli~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~l~nP~NPTG 179 (370)
T PRK09105 112 VLAFTSPTAGLVTADPTYEAGWRAADAQG------------APVAKVPLRADGAHDVKAMLAADPNAGLIYICNPNNPTG 179 (370)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcC------------CeEEEecCCCCCCCCHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 57788999999999999999999999999 47778887643222211 21 135688999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
.+++.++++++++.++ ++++||+||+|.+|... + +...+....+++++++||||++|++|+|+||++++++++
T Consensus 180 ~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~--~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i--- 252 (370)
T PRK09105 180 TVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA--P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLL--- 252 (370)
T ss_pred cCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC--c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHH---
Confidence 9999999999999754 58999999999876532 2 333333335689999999999999999999999998885
Q ss_pred CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCC
Q 045431 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR 379 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~ 379 (433)
+.+... ..+..+.+.|.++.+++.+ ..++++.++.++++++.+.+.|+++|+.+.++.+ .|+|++++ .
T Consensus 253 -----~~l~~~---~~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~-~f~~~~~~-~ 320 (370)
T PRK09105 253 -----AKLARF---GHNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQA-NCFMVDVK-R 320 (370)
T ss_pred -----HHHHhc---CCCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCC-cEEEEeCC-C
Confidence 555544 2344788889888888874 3678899999999999999999999988877655 45568876 3
Q ss_pred ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 380 SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 380 ~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+..++...++++ ||.+ |..|. ..++++||++. ++++++++++.|++++
T Consensus 321 ~~~~l~~~L~~~-gI~v--~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 PAKAVADAMAKQ-GVFI--GRSWP-IWPNWVRVTVG-SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CHHHHHHHHHHC-CcEE--ecCCC-CCCCeEEEEcC-CHHHHHHHHHHHHHHh
Confidence 566787887765 9998 34453 34689999985 5778899998888765
No 82
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-44 Score=342.40 Aligned_cols=325 Identities=20% Similarity=0.330 Sum_probs=258.6
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR- 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~- 141 (433)
.++|+|+.|++++++|+.+.+++.+.+.. ....|++ .|.++||+++|+++ ++++++|++|+|+++++.+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----~~~~y~~-~~~~~lr~aia~~~----~~~~~~I~it~G~~~al~~~ 93 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGD-----DLRLYPD-PNADALRQAIAAYY----GLDPEQVFVGNGSDEVLAHA 93 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhh-----hhhcCCC-CcHHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHH
Confidence 36899999999988889999999887652 2457854 47799999999998 7899999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC-CCccEEEEcCCCCcccc
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV-ARTDIIFFCSPNNPTGA 220 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~p~nPtG~ 220 (433)
+..++++||.|++++|+|+.+...++..| .+++.++.+++..+ +++.. ..+++++++|||||||.
T Consensus 94 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~--d~~~l~~~~~~v~~~~P~NPtG~ 159 (353)
T PRK05387 94 FLAFFNHDRPLLFPDITYSFYPVYAGLYG------------IPYEEIPLDDDFSI--DVEDYLRPNGGIIFPNPNAPTGI 159 (353)
T ss_pred HHHhcCCCCEEEEeCCCHHHHHHHHHHcC------------CEEEEeecCCCCCC--CHHHHHhcCCEEEEeCCCCCCCC
Confidence 57788999999999999999998888888 47778887643333 33321 35678889999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCC
Q 045431 221 AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDG 300 (433)
Q Consensus 221 ~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~ 300 (433)
++|.+++++|+++++ +++||+||+|.+|... ...++.. ..+++++++||||.+|++|+|+||++++++++
T Consensus 160 ~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~-~~~~~~~---~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~---- 229 (353)
T PRK05387 160 ALPLAEIERILAANP--DSVVVIDEAYVDFGGE-SAIPLID---RYPNLLVVQTFSKSRSLAGLRVGFAIGHPELI---- 229 (353)
T ss_pred CCCHHHHHHHHHhCC--CcEEEEeCcccccCCc-chHHHHh---hCCCEEEEEehhHhhcchhhhceeeecCHHHH----
Confidence 999999999998653 8999999999876322 1222221 24678999999999999999999999998875
Q ss_pred cchhHHHHHHHhhc-cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCC
Q 045431 301 FPVAKDFNRIVCTC-FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR 379 (433)
Q Consensus 301 ~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~ 379 (433)
+.+.+..... ..+.+.++|.++.+++.+ ..++++.+++++++++.+.+.|+++|+.+. +.+++|+|+++++.
T Consensus 230 ----~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~ 302 (353)
T PRK05387 230 ----EALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVL-PSKANFVFARHPSH 302 (353)
T ss_pred ----HHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeEC-CCcCcEEEEECCCC
Confidence 6666554332 345788999998888874 345678889999999999999999988765 46789999999866
Q ss_pred ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 380 SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 380 ~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
++.++.+.+. ++||.+.+... +..++++||++. +.+++++++++|++++
T Consensus 303 ~~~~~~~~l~-~~gi~v~~~~~--~~~~~~iRis~~-~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 303 DAAELAAKLR-ERGIIVRHFNK--PRIDQFLRITIG-TDEEMEALVDALKEIL 351 (353)
T ss_pred CHHHHHHHHH-HCCEEEEECCC--CCCCCeEEEEeC-CHHHHHHHHHHHHHHh
Confidence 6777777765 45999975321 234679999985 6789999999999876
No 83
>PLN02397 aspartate transaminase
Probab=100.00 E-value=2.1e-44 Score=349.87 Aligned_cols=341 Identities=16% Similarity=0.197 Sum_probs=249.3
Q ss_pred CCceEEecCCC-CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-cC-CCCCCcE-----EEcC
Q 045431 62 DAEVISLGIGD-TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-DL-GIEEGDI-----FVSD 133 (433)
Q Consensus 62 ~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~~-~~~~~~i-----~~~~ 133 (433)
+...|+++.|. ++...++.+.+++.++...........+|++..|.++||+++++|+.+ +. ..++++| +.++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 44679999996 555455554455555432221113345899999999999999999965 22 1223333 3444
Q ss_pred ChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC-------C-CCC
Q 045431 134 GAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS-------T-VAR 205 (433)
Q Consensus 134 G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~ 205 (433)
|+.+.+..+..++.|||+|++++|+|+.|...++..| .+++.++..+++++..+++ . .++
T Consensus 127 Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g------------~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~ 194 (423)
T PLN02397 127 GSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAG------------VPVRTYRYYDPKTRGLDFDGLLEDLKAAPDG 194 (423)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcC------------CeEEEeecccCcCCccCHHHHHHHHHhCCCC
Confidence 4444333456666799999999999999999999999 4777887632222223322 1 245
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC---CCCcccccCCCCcceEEEeccccccccc
Q 045431 206 TDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD---NPRSIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 206 ~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++ .+.++..+....+++|+++||||+++++
T Consensus 195 ~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~ 274 (423)
T PLN02397 195 SFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLY 274 (423)
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCc
Confidence 6777778999999999999999999999999999999999999998864 1233333332345799999999999999
Q ss_pred ccceeeee--c-cccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-----hHHHHHHHHHHHHHHHHHH
Q 045431 283 GVRLGWTV--I-PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-----KAVHEVIGFYKENTDIIVE 354 (433)
Q Consensus 283 G~r~G~l~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~ 354 (433)
|||+||++ + +++++. ++...+.........+++.+.|.++.++|++..+ ++++++++.++++++.+.+
T Consensus 275 G~RvG~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~ 350 (423)
T PLN02397 275 GERVGALSVVCKSADVAV----RVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYD 350 (423)
T ss_pred cccceEEEEEeCCHHHHH----HHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999985 4 444320 0112333333333445778899988888886421 3478889999999999999
Q ss_pred HHhhcC----CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec-cChhHHHHHHHHHH
Q 045431 355 TFNSLG----FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF-GHRGNVLEACKRFK 429 (433)
Q Consensus 355 ~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~l~~~l~~l~ 429 (433)
.|+++| +.+..|++|+|+|++++ .+++..|++++||.+.+ .+ |++++ .+.+.+++++++|+
T Consensus 351 ~L~~~~~~~~~~~~~p~gg~fl~~~l~----~~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~ 416 (423)
T PLN02397 351 ALEARGSPGDWSHITKQIGMFSFTGLN----KEQVDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIH 416 (423)
T ss_pred HHHhcCCCCCCCcccCCceEEEecCCC----HHHHHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHH
Confidence 999987 77777899999999985 45888999999999963 12 99986 69999999999999
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
+++
T Consensus 417 ~~~ 419 (423)
T PLN02397 417 AVV 419 (423)
T ss_pred HHH
Confidence 886
No 84
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=333.29 Aligned_cols=323 Identities=21% Similarity=0.351 Sum_probs=266.8
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCC-CCCCcEEEcCChHHHHHH-
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG-IEEGDIFVSDGAKCDISR- 141 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~-~~~~~i~~~~G~~~al~~- 141 (433)
++++|+.+++++++|+.+.+++.+.+. ....| |.....+|++++++++ + .++++|++++|+++.|.+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~------~~~rY-Pd~~~~~l~~a~a~~~----~~~~~~~V~~gnGsde~i~~l 91 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD------KLNRY-PDPDYRELRAALAEYY----GVVDPENVLVGNGSDELIELL 91 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH------hhccC-CCCcHHHHHHHHHHHh----CCCCcceEEEcCChHHHHHHH
Confidence 589999999999999999999988774 34577 4458999999999998 6 788999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcCCCC
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCSPNN 216 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~p~n 216 (433)
+..++.+||+|+++.|+|..|...++..| .+++.++.++ +..+++. ..++++|++|||||
T Consensus 92 ~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g------------~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNN 156 (356)
T COG0079 92 VRAFVEPGDTVLIPEPTFSMYEIAAQLAG------------AEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNN 156 (356)
T ss_pred HHHhhcCCCEEEEcCCChHHHHHHHHhcC------------CeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCC
Confidence 57888999999999999999999999999 4788888765 3333222 23799999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
|||..++.++++++++.+.+ +.+||+||+|.+|... ..+.-.. .++|+++++||||.||++|+|+||++++++++
T Consensus 157 PTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~---~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 157 PTGTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE---SSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred CCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc---hhhhhcc-CCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence 99999999999999999988 9999999999998762 1121122 35779999999999999999999999999996
Q ss_pred ccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEEC
Q 045431 297 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~ 376 (433)
+.+++++. .+..|.+++.++.+++.+. +++++.++...+.++++.+.|+.+|+.-+.|+.++|+++++
T Consensus 232 --------~~l~~vr~--p~~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~ 299 (356)
T COG0079 232 --------AALNKVRP--PFNVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRV 299 (356)
T ss_pred --------HHHHHhcC--CCCCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEEC
Confidence 77776653 3457999999999999866 67899999999999999999999985524456799999999
Q ss_pred CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 377 PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+......+.+.|+++ ||.++.... .+..++++||++.. +++.++.+++|++++
T Consensus 300 ~~~~~~~l~~~L~~~-giivR~~~~-~~~~~~~lRitvgt-~een~~ll~AL~~~~ 352 (356)
T COG0079 300 PDAEAAALAEALLKK-GILVRDCSS-VGLLPGYLRITVGT-PEENDRLLAALREVL 352 (356)
T ss_pred CCccHHHHHHHHHHC-CEEEEeCCC-CCCCCCeEEEEeCC-HHHHHHHHHHHHHHH
Confidence 842244666666655 999998765 44457899999854 444499999998775
No 85
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.9e-44 Score=346.02 Aligned_cols=292 Identities=18% Similarity=0.264 Sum_probs=231.5
Q ss_pred CCceEEecCCCCC--------C----------------------CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHH
Q 045431 62 DAEVISLGIGDTT--------E----------------------PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLR 111 (433)
Q Consensus 62 ~~~~i~l~~g~~~--------~----------------------~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr 111 (433)
+.++|+|+.|+|+ + .+++.+.++ ...+.... .....|++..|.++||
T Consensus 37 g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a-~~~l~~~~--~~~~~Y~~~~G~~~LR 113 (407)
T PLN02368 37 GKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA-KHYLSLTS--GGLGAYSDSRGLPGVR 113 (407)
T ss_pred hhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH-HHHHhcCC--CCCCCCCCCCCCHHHH
Confidence 4579999999996 2 134444444 44432211 3467899999999999
Q ss_pred HHHHHHHhc--cCCCCCCcEEEcCChHHHHHH-HHHhc-CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEE
Q 045431 112 AAIASTFYK--DLGIEEGDIFVSDGAKCDISR-LQIVF-GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEY 187 (433)
Q Consensus 112 ~~la~~l~~--~~~~~~~~i~~~~G~~~al~~-l~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 187 (433)
++||+|+.+ ++.+++++|++|+|+++++.+ +..++ ++||.|++++|+|+.|...++..| .+++.
T Consensus 114 ~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g------------~~~v~ 181 (407)
T PLN02368 114 KEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLG------------GTLVP 181 (407)
T ss_pred HHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcC------------CEEEE
Confidence 999999975 666789999999999999987 56676 799999999999999999999999 47888
Q ss_pred eecCccCCcccCCCC-----C------CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-
Q 045431 188 MRCTAENGFFPDLST-----V------ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN- 255 (433)
Q Consensus 188 ~~~~~~~~~~~~~~~-----~------~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~- 255 (433)
++.+.++++..+++. . .++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++.
T Consensus 182 v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~ 261 (407)
T PLN02368 182 YYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER 261 (407)
T ss_pred EecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 888765555554332 1 1689999999999999999999999999999999999999999999988753
Q ss_pred -CCccccc----CC---CCcceEEEecccccc-cccccceeeeec---cccccccCCcchhHHHHHHHhhccCCCcHHHH
Q 045431 256 -PRSIFEI----PG---AKEVAIETSSFSKYA-GFTGVRLGWTVI---PKELLFSDGFPVAKDFNRIVCTCFNGASNISQ 323 (433)
Q Consensus 256 -~~~~~~~----~~---~~~~vi~i~S~sK~~-~~~G~r~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 323 (433)
+.++.++ +. ..+++|+++||||+| |++|||+||+++ +++++ +.+.+... ...+++.++|
T Consensus 262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li--------~~~~~~~~-~~~~~~~~~Q 332 (407)
T PLN02368 262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTV--------EEIYKVAS-IALSPNVSGQ 332 (407)
T ss_pred CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHH--------HHHHHHhc-ccCCCCcHHH
Confidence 3454432 11 134899999999998 899999999994 76664 56665532 3455888999
Q ss_pred HHHHHhcCcCC---------hhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEECC
Q 045431 324 AGGLACLSPEG---------FKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQFP 377 (433)
Q Consensus 324 ~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~ 377 (433)
.++.++++... .++++++++.|++|++.+.+.|+++ |+.+..|++|+|+|++++
T Consensus 333 ~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 333 IFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 99999997431 1234567899999999999999998 999988999999998776
No 86
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-43 Score=339.48 Aligned_cols=329 Identities=19% Similarity=0.255 Sum_probs=256.2
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~~ 141 (433)
..|+|+.|+|++++|+.+.+++.+.+.... .....|+ ..|.++||+++|+|+++ ++++++++|++|+|+++++.+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~--~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAA--AGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhh--hhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 469999999999999999999999876421 2356784 56899999999999986 667899999999999999998
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC---CCCccEEEEcCCCC
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST---VARTDIIFFCSPNN 216 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~l~~p~n 216 (433)
+..++++||.|+++.|+|+.+...++..| .+++.++.+++.+++.+ +++ ..++++++++||||
T Consensus 104 ~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g------------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~N 171 (368)
T PRK03317 104 LLQAFGGPGRTALGFVPSYSMHPIIARGTH------------TEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNN 171 (368)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHhcC------------CeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCC
Confidence 57788999999999999999999888777 36666665433232221 211 24688999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
|||.+++.+++++|+++| +++||+||+|.++.+.+.+ +...+....+++++++||||.+|++|+|+||++++++++
T Consensus 172 PtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~ 247 (368)
T PRK03317 172 PTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVV 247 (368)
T ss_pred CCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHH
Confidence 999999999888888876 6999999999998765533 222221223478999999999999999999999998885
Q ss_pred ccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEEC
Q 045431 297 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~ 376 (433)
+.+.... .....+.++|.++.+++++. +.+.+.+++++++++.+.+.|+++|+.+..+.+++++|.++
T Consensus 248 --------~~l~~~~--~~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 315 (368)
T PRK03317 248 --------DALRLVR--LPYHLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFGRF 315 (368)
T ss_pred --------HHHHhcC--CCCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEecc
Confidence 5555433 24457899999999999742 33445567788999999999999999888777777787676
Q ss_pred CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 377 PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+ +..++...++ ++||.+.+.. .++++||++. +.++++.++++|++++
T Consensus 316 ~--~~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~-~~~~~~~~~~~l~~~~ 362 (368)
T PRK03317 316 A--DRHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG-TPEENDAFLAALAEVL 362 (368)
T ss_pred C--CHHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC-CHHHHHHHHHHHHHHH
Confidence 4 4455666655 5699998642 2579999975 6678899999988775
No 87
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-43 Score=337.50 Aligned_cols=324 Identities=19% Similarity=0.294 Sum_probs=259.4
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC-CcEEEcCChHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE-GDIFVSDGAKCDISR 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~-~~i~~~~G~~~al~~ 141 (433)
.++|+|+.|++++++|+.+.+++.+.+.. .....|++ .|.++||+++|+|+ ++++ ++|++|+|+++++.+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~-~~~~~lr~~ia~~~----~~~~~~~I~~t~G~~~~i~~ 96 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAE----VALNRYPD-PRAAALKAALRAAM----GVPAGADVLLGNGSDELIQL 96 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhc----cccccCCC-CCHHHHHHHHHHHh----CcCCCCcEEEcCCHHHHHHH
Confidence 46999999999999999999999998753 34567865 68899999999998 5554 589999999999997
Q ss_pred H-HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC---CCCccEEEEcCCCC
Q 045431 142 L-QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST---VARTDIIFFCSPNN 216 (433)
Q Consensus 142 l-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~l~~p~n 216 (433)
+ ..++++||+|++++|+|..+...++..| .+++.++.+++.....+ +++ ..++++++++||||
T Consensus 97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g------------~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~N 164 (356)
T PRK04870 97 LALACAKPGATVLAPEPGFVMYRMSAKLAG------------LEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNN 164 (356)
T ss_pred HHHHhcCCCCEEEECCCCHHHHHHHHHHcC------------CEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCC
Confidence 4 6678999999999999999999999999 47888888643232222 211 24789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
|||.+++.+++++|+++| ++++|+||+|.++...+ ..+ .+.. .+++++++|||| ++++|+|+||++++++++
T Consensus 165 PtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~-~~~--~~~~-~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i 236 (356)
T PRK04870 165 PTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS-WLP--RLAR-FPNLLVMRTVSK-LGLAGLRLGYLAGHPAWI 236 (356)
T ss_pred CCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc-hHH--HHhh-CCCEEEEecchh-hhhHHHhhhhhhCCHHHH
Confidence 999999999999999988 68899999999876432 111 1222 357999999999 789999999999998875
Q ss_pred ccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEE
Q 045431 297 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQ 375 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~ 375 (433)
+.+.... ..+..+.++|.++..++++ ..++++.+++++++++.+.+.|+++ |+.+. +.+|+|+|++
T Consensus 237 --------~~~~~~~--~~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~ 303 (356)
T PRK04870 237 --------AELDKVR--PPYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVR 303 (356)
T ss_pred --------HHHHHcc--CCCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEE
Confidence 5555443 2345788999988888864 2457888889999999999999987 87664 4678899999
Q ss_pred CCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 376 FPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 376 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
++ +..++... ++++||.+++|..|+...++++||++. +.++.+.++++|++++
T Consensus 304 ~~--~~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 304 VP--DAAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred CC--CHHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 87 44555544 566799999999987656789999985 6788889988888764
No 88
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-43 Score=339.34 Aligned_cols=323 Identities=21% Similarity=0.298 Sum_probs=252.8
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.++|+|+.|++++++|+.+.+++.+. .....|+ ..+.++||+++|+++ ++++++|++|+|+++++.+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-------~~~~~Yp-~~~~~~lr~~ia~~~----~~~~~~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM-------KFPYVYP-DPESRRLRAALAEDS----GLESENILVGCGADELIDL 118 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh-------HhhccCC-CCCHHHHHHHHHHHh----CcChhhEEEcCCHHHHHHH
Confidence 357899999999988888888877542 1123474 457899999999998 7899999999999999997
Q ss_pred H-HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC---CCCccEEEEcCCCC
Q 045431 142 L-QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST---VARTDIIFFCSPNN 216 (433)
Q Consensus 142 l-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~l~~p~n 216 (433)
+ ..++++||+|++++|+|+.|...++..| .+++.++.+.+..+..+ ++. .+++++|+++||||
T Consensus 119 ~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~N 186 (380)
T PLN03026 119 LMRCVLDPGDKIIDCPPTFGMYVFDAAVNG------------AEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNN 186 (380)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcC------------CEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCC
Confidence 4 6778999999999999999988888888 47777777533222211 211 36889999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
|||.+++.+++++|++.+ ++||+||+|.+|.+.+... ..++ ..+++|+++||||.+|++|+|+||++++++++
T Consensus 187 PTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~~~~--~~~~-~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i 259 (380)
T PLN03026 187 PDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQESRM--KWVK-KYDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 259 (380)
T ss_pred CCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCcchH--HHHH-hCCCEEEEecchHhhcCccccceeeecCHHHH
Confidence 999999999998888753 8999999999987653221 1222 24689999999999999999999999998885
Q ss_pred ccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEEC
Q 045431 297 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~ 376 (433)
+.+.+... .+..+.++|.++.++|++ ..++++.++.++++++.+.+.|++++.....+.+++|+|+++
T Consensus 260 --------~~l~~~~~--~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~ 327 (380)
T PLN03026 260 --------EYLWRAKQ--PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRV 327 (380)
T ss_pred --------HHHHHhcC--CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEEC
Confidence 55655443 345788999999999974 357888999999999999999998853223567899999999
Q ss_pred C-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 377 P-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 377 ~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
+ +.++.++...++ ++||.++++..+ ..++++||++. +.++++.+++.|+++
T Consensus 328 ~~~~~~~~~~~~l~-~~gI~v~~~~~~--~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 328 TSGRDAKKLKEDLA-KMGVMVRHYNSK--ELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred CCCCCHHHHHHHHH-HCCeEEEECCCC--CCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 7 456677777776 569999998653 34679999986 556777777777654
No 89
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=8.8e-44 Score=343.15 Aligned_cols=341 Identities=19% Similarity=0.217 Sum_probs=254.0
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-cCCCC---CCcEEEcCChHHHHHH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-DLGIE---EGDIFVSDGAKCDISR 141 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~~~~~---~~~i~~~~G~~~al~~ 141 (433)
++.+.|....+..+.+.+++.+.+.+... ...++|+++.|.++||+++++++.+ ..... .++|++|+|+++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~ 84 (388)
T PRK08637 6 YNATIGMATEKGGPMYLSSLQDLLNDLTP-DEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSL 84 (388)
T ss_pred eecceeeEecCCCcchHHHHHHHHHhhcc-ccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHH
Confidence 55555554333344666666666665322 5667999999999999999999875 32333 3689999999999997
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHH-HhCCcccccccccccceEEEeecC-ccCCcccC-CCC------CCCccEEEE
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSV-IMGQTGEFQKDAEKYGKIEYMRCT-AENGFFPD-LST------VARTDIIFF 211 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~------~~~~~~i~l 211 (433)
+..+++|||.|++++|+|+.+...+. ..| .+++.++.. +++++..+ ++. .+...++++
T Consensus 85 ~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g------------~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~ 152 (388)
T PRK08637 85 VADLFVDQGDTVLLPDHNWGNYKLTFNTRRG------------AEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVIL 152 (388)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHhcC------------CEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEE
Confidence 57778999999999999999998764 567 478888873 33344332 211 123345666
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHH-----cCCEEEEeccccccccCCCC-Ccc-cccCCCCcce--EEEeccccccccc
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKD-----NGSIIVYDSAYALYISDDNP-RSI-FEIPGAKEVA--IETSSFSKYAGFT 282 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~-----~~~~li~De~~~~~~~~~~~-~~~-~~~~~~~~~v--i~i~S~sK~~~~~ 282 (433)
+|||||||.++|.+++++|+++|++ |+++||+||+|.++.+++.+ .++ ..+....+++ ++++||||.+++|
T Consensus 153 ~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~p 232 (388)
T PRK08637 153 NFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVW 232 (388)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCc
Confidence 7999999999999999999998875 89999999999999887642 233 2222224564 4567999999899
Q ss_pred ccceeeeeccc------cccccCCcchhHHHHHH----HhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHH
Q 045431 283 GVRLGWTVIPK------ELLFSDGFPVAKDFNRI----VCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDI 351 (433)
Q Consensus 283 G~r~G~l~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 351 (433)
|+|+||++++. +++ +.+.+. .......+|.++|.++.+++++..+ .++++.+..++++++.
T Consensus 233 GlRlG~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~ 304 (388)
T PRK08637 233 GFRVGFITFGTKAGSSQTVK--------EALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEK 304 (388)
T ss_pred ccceEEEEEccccCCcHHHH--------HHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999753 342 444321 1123345789999999999986544 5677788889999999
Q ss_pred HHHHHhhc----CCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHHHHHHH
Q 045431 352 IVETFNSL----GFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNVLEACK 426 (433)
Q Consensus 352 l~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~ 426 (433)
+.+.|++. ++.+.+|.+|+|+|+++++.++.++...+++++||.+.+. +++++||+++. +.++++++++
T Consensus 305 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~ 378 (388)
T PRK08637 305 TKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFD 378 (388)
T ss_pred HHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHH
Confidence 99999765 5777788899999999985456677788777779988742 35789999865 8999999999
Q ss_pred HHHHhhC
Q 045431 427 RFKHLYK 433 (433)
Q Consensus 427 ~l~~~l~ 433 (433)
+|+++++
T Consensus 379 ~l~~~~~ 385 (388)
T PRK08637 379 SIYKAIK 385 (388)
T ss_pred HHHHHHH
Confidence 9998863
No 90
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-43 Score=331.07 Aligned_cols=317 Identities=19% Similarity=0.324 Sum_probs=248.2
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.++|+|+.|++++++|+.+.+++.+++.. .....|+ +.|.++||+++++|+.+.. +++++|++|+|+++++.+
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~----~~~~~Y~-~~~~~~Lr~aia~~~~~~~-~~~~~i~it~Ga~~~i~~ 91 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNS----DTLRIYY-DSPDEELIEKILSYLDTDF-LSKNNVSVGNGADEIIYV 91 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhh----hhhhcCC-CCChHHHHHHHHHHhCCCC-CCcceEEEcCCHHHHHHH
Confidence 457899999999999999999999987753 2233464 4589999999999996532 789999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccC
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~ 221 (433)
+...+ |.|++++|+|+.+...++.+| .+++.++.+.+.... + ....++++++++|||||||.+
T Consensus 92 ~~~~~---d~v~v~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~-~-~~~~~~~~i~i~nP~NPTG~~ 154 (335)
T PRK14808 92 MMLMF---DRSVFFPPTYSCYRIFAKAVG------------AKFLEVPLTKDLRIP-E-VNVGEGDVVFIPNPNNPTGHV 154 (335)
T ss_pred HHHHh---CcEEECCCCHHHHHHHHHHcC------------CeEEEecCCCcCCCC-h-hHccCCCEEEEeCCCCCCCCC
Confidence 65445 679999999999999999999 478888886543221 1 122457899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCc
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF 301 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~ 301 (433)
+|.+++++|+ +++++||+||+|.+|.. ....++. . ..+++|+++||||++|++|+|+||++++++++
T Consensus 155 ~s~~~l~~l~----~~~~~ii~DE~Y~~f~~-~~~~~~~--~-~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~----- 221 (335)
T PRK14808 155 FEREEIERIL----KTGAFVALDEAYYEFHG-ESYVDLL--K-KYENLAVIRTFSKAFSLAAQRIGYVVSSEKFI----- 221 (335)
T ss_pred cCHHHHHHHH----hcCCEEEEECchhhhcC-CchHHHH--H-hCCCEEEEEechhhccCcccceEEEEeCHHHH-----
Confidence 9999888886 47999999999998742 2222221 1 23589999999999999999999999998875
Q ss_pred chhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCCh
Q 045431 302 PVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSS 381 (433)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~ 381 (433)
+.+.+.. ...+.+.++|.++..++++ .+++++..+.++++++.+.+.|++.|+.+.++ .|.|+|+.+++.+.
T Consensus 222 ---~~l~~~~--~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~l~~~~~ 293 (335)
T PRK14808 222 ---DAYNRVR--LPFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFIFMEKEEK 293 (335)
T ss_pred ---HHHHHhc--CCCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCeEEEEeCCCccH
Confidence 6665544 2355788999988888863 34567777888888999999999999887765 77899999986555
Q ss_pred HHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 382 WDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 382 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
.++...+ .++||.++. | .+++||++ .+.++.++.++.|+++
T Consensus 294 ~~~~~~l-~~~Gi~V~~---~----~~~~Risi-~~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 294 ERLLEHL-RAKNIAVRS---F----REGVRITI-GKREENDMILKELEVF 334 (335)
T ss_pred HHHHHHH-HHCCeEEEE---C----CCCeEEec-CCHHHHHHHHHHHHhh
Confidence 5555554 456999984 3 25799997 4568888998888753
No 91
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.9e-43 Score=334.99 Aligned_cols=330 Identities=20% Similarity=0.334 Sum_probs=262.3
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
+..++|+|+.+.+++.+++.+.+++.+.+.. ...|++. +..+||+++|+++ ++++++|++|+|+++++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADE------LHRYPDG-SGFELKAALAEKF----GVDPERIILGNGSDEILE 98 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh------hcCCCCC-cHHHHHHHHHHHh----CcCHHHEEEcCCHHHHHH
Confidence 3456999999998888888888988887642 3567554 4579999999998 788899999999999998
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCC
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNN 216 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~n 216 (433)
+ +..++++||.|++++|+|..+.......| .+++.++.+. .+...+ ++. .+++++|+++||||
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~n 165 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVG------------AKPVEVPAKD-YGHDLDAMLAAVTPRTRLVFIANPNN 165 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcC------------CeEEEecccC-CCCCHHHHHHHhCCCCcEEEEeCCCC
Confidence 7 47778999999999999999888788888 4777777632 222211 221 25789999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|||.+++.+++++|++.++ ++++||+||+|.++.+.+. ..++..++ ..+++++++||||.+|++|+|+||+++++++
T Consensus 166 ptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 243 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVA-KFPNVVVTRTFSKAYGLAGLRVGYGIAPPEI 243 (367)
T ss_pred CCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHh-hcCCEEEEeeehHhhcCcccceeeeeCCHHH
Confidence 9999999999999998875 6999999999998776543 22332222 2467999999999999999999999999887
Q ss_pred cccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEE
Q 045431 296 LFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQ 375 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~ 375 (433)
+ +.+.+... ....+.++|.++.+++++ ..++++.++.++++++.+.+.|++.|+.+.+ .+|+|+|++
T Consensus 244 ~--------~~l~~~~~--~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~g~~~~i~ 310 (367)
T PRK02731 244 I--------DALNRVRQ--PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEYIP-SVGNFILVD 310 (367)
T ss_pred H--------HHHHHccC--CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCceEEEEE
Confidence 5 55554432 244688999999999974 3567888999999999999999998887764 578999999
Q ss_pred CC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 376 FP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 376 ~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
++ ..++.++...+. ++||.+.++..|+ .++++|+++. +.++++.+++.|+++++
T Consensus 311 ~~~~~~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 311 FDDGKDAAEAYQALL-KRGVIVRPVAGYG--LPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCCCCCHHHHHHHHH-HCCEEEEeCCCCC--CCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 96 446667777665 4599999998875 3579999985 67889999999988763
No 92
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-42 Score=331.68 Aligned_cols=319 Identities=15% Similarity=0.235 Sum_probs=247.4
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
..++++.+++++++++.. . .....|+++ +..+||+++|+++ ++++++|++|+|+++++.+ +
T Consensus 32 ~~~~~~~ne~~~~~~~~~-------~------~~~~~Y~~~-~~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~ 93 (364)
T PRK04781 32 GDVWLNANESAWANPADP-------D------ASTRRYPDP-QPPGLRSALAALY----GCAPEQLLIGRGSDEAIDLLV 93 (364)
T ss_pred CCEEeeCCCCCCCCChhh-------c------chhccCCCC-CHHHHHHHHHHHh----CcChHHEEEeCCHHHHHHHHH
Confidence 368899998877666531 0 224567544 5799999999998 7899999999999999997 4
Q ss_pred HHhcCCC-CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCc-cCCcccCCCC------CCCccEEEEcCC
Q 045431 143 QIVFGSN-VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTA-ENGFFPDLST------VARTDIIFFCSP 214 (433)
Q Consensus 143 ~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~i~l~~p 214 (433)
..++.+| |.|++++|+|+.+...++..| .+++.++.+. ++++..+++. .+++++++++||
T Consensus 94 ~~~~~~g~~~vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p 161 (364)
T PRK04781 94 RALCVPGRDAVLVTPPVFGMYAVCARLQN------------APLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSP 161 (364)
T ss_pred HHhcCCCCCeEEEcCCChHHHHHHHHHcC------------CEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCC
Confidence 6677888 799999999999988888888 4788888743 3344333221 367899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
|||||.+++.+++++++++|+ ++++||+||+|.+|.+.....++ .+ ..+++|+++||||+||+||+|+||++++++
T Consensus 162 ~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~--~~-~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~ 237 (364)
T PRK04781 162 SNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVPSAVGL--LA-RYDNLAVLRTLSKAHALAAARIGSLIANAE 237 (364)
T ss_pred CCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcchHHH--Hh-hCCCEEEEecChhhcccccceeeeeeCCHH
Confidence 999999999999999999885 47999999999998754222122 22 246899999999999999999999999998
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVW 373 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~ 373 (433)
++ +.+.+... ..+.+.++|.++.+++++....+..+..+.++++++.+.+.|+++ |+....|.+|+|+|
T Consensus 238 l~--------~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~ 307 (364)
T PRK04781 238 LI--------AVLRRCQA--PYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLL 307 (364)
T ss_pred HH--------HHHHhccC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEE
Confidence 85 66665543 345788999999999986555555666678899999999999988 66544567899999
Q ss_pred EECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 374 VQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
++++ +..++.+.+ +++||.++||..|. ..++++||++. +.++.+..++.|+++
T Consensus 308 ~~~~--~~~~~~~~l-~~~gI~v~~~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~~ 360 (364)
T PRK04781 308 VRFD--DAEAAFQAL-LAAGVVVRDQRAAP-RLSDALRITLG-TPEQNDRVLAALQRT 360 (364)
T ss_pred EEcC--CHHHHHHHH-HHCCeEEeeCCCCC-CCCCeEEEeCC-CHHHHHHHHHHHHHH
Confidence 9997 345566555 45699999998774 33679999985 567777777777654
No 93
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7.9e-42 Score=322.70 Aligned_cols=307 Identities=16% Similarity=0.200 Sum_probs=241.6
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-CCcEEEcCChHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-EGDIFVSDGAKCDISR 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~G~~~al~~ 141 (433)
.++|+|+.+++++++|+....+ ..+ ..|+. .. .+||+++|+++ +++ +++|++|+|+++++.+
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~~--~~~---------~~Yp~-~~-~~L~~~ia~~~----~~~~~~~I~i~~Gs~e~i~~ 86 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPA--DAW---------RRLPE-DD-DGLAACAARYY----GAPDAAHVLPVAGSQAAIRA 86 (339)
T ss_pred hhhceeccCCCCCCCCCCCCCH--HHH---------HhCCC-ch-HHHHHHHHHHh----CCCCcccEEECcCHHHHHHH
Confidence 3579999999987666222111 111 24743 33 89999999998 775 5899999999999998
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccC
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~ 221 (433)
+..++++|| |++++|+|+.|...++..| .+++.++.+. + .+. ..++++++||||||||.+
T Consensus 87 l~~~~~~g~-v~v~~P~y~~y~~~~~~~g------------~~~~~v~~~~--~---~~~--~~~~~v~l~nPnNPTG~~ 146 (339)
T PRK06959 87 LPALLPRGR-VGIAPLAYSEYAPAFARHG------------HRVVPLDEAA--D---TLP--AALTHLIVVNPNNPTAER 146 (339)
T ss_pred HHHhcCCCe-EEEcCCCcHHHHHHHHHCC------------CEEEeecccc--h---hcc--ccCCEEEEeCCCCCCCCC
Confidence 766788887 8889999999999999999 4677777643 1 111 245789999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCc
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF 301 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~ 301 (433)
++.+++++|++.|.+++.++|+||+|.++... .++..+.. .+++|+++||||.||++|+|+||++++++++
T Consensus 147 ~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li----- 217 (339)
T PRK06959 147 LPAARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALL----- 217 (339)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhccC-CCCEEEEecChhhcCCcchheEEEecCHHHH-----
Confidence 99999999999999999999999999987643 33444332 3679999999999999999999999998885
Q ss_pred chhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCCh
Q 045431 302 PVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSS 381 (433)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~ 381 (433)
+.+.+... .+..+.++|.++.++|++. .+.++.++.++++++++.+.|+++|+.+. ..++|+|++++ +.
T Consensus 218 ---~~l~~~~~--~~~vs~~~q~a~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~f~~~~~~--~~ 286 (339)
T PRK06959 218 ---AALRDALG--AWTVSGPARHAVRAAFADA--AWQAAMRERLAADGARLAALLRAHGFAVH--ATPLFSWTDDP--RA 286 (339)
T ss_pred ---HHHHHhcC--CCCCcHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHHCCCCcc--CcceEEEEeCC--CH
Confidence 66665543 3447889999999999753 45688899999999999999999988765 36799999986 45
Q ss_pred HHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 382 WDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 382 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.++...+.+ +||.++. |+ ..+++||++..+.++++++++.|++++
T Consensus 287 ~~l~~~l~~-~GI~vr~---~~--~~~~lRisi~~~~~e~~~l~~al~~~~ 331 (339)
T PRK06959 287 AALHAALAR-RGIWTRY---FA--PPPSVRFGLPADEAEWQRLEDALAECV 331 (339)
T ss_pred HHHHHHHHh-CCeEEEE---CC--CCCeEEEECCCCHHHHHHHHHHHHHHH
Confidence 566666655 5999974 32 246899998777788888888887764
No 94
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=324.43 Aligned_cols=322 Identities=20% Similarity=0.331 Sum_probs=247.5
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
..++|+.|++++++|+.+.+++.+.+.. .....|++ .+..+||+++|+|+ ++++++|++|+|+++++.+ +
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~----~~~~~y~~-~~~~~lr~~ia~~~----~~~~~~i~it~G~~~~l~~~~ 93 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKS----SQVNIYPD-PTAEKLREELARYC----SVVPTNIFVGNGSDEIIHLIM 93 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhc----CcccCCCC-ccHHHHHHHHHHHh----CCCcccEEEecCHHHHHHHHH
Confidence 4699999999999999999999887753 34457854 45799999999997 7889999999999999987 5
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC---CCCccEEEEcCCCCcc
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST---VARTDIIFFCSPNNPT 218 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~l~~p~nPt 218 (433)
..++++||+|++++|+|+.+...++..| .+++.++.+++.+++.+ +++ ..++++|+++||||||
T Consensus 94 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPt 161 (351)
T PRK14807 94 LAFINKGDVVIYPHPSFAMYSVYSKIAG------------AVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPT 161 (351)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHHcC------------CeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCC
Confidence 7778999999999999999988888888 47778877643333222 221 2378999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccccc
Q 045431 219 GAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 219 G~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~ 298 (433)
|.+++.++++++++ +++.++|+||+|.++. +....++ ++ ..+++|+++||||++|+||+|+||++++++++
T Consensus 162 G~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~~~~~~~--~~-~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~-- 232 (351)
T PRK14807 162 GSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-GNTIVDV--IN-EFENLIVLRTLSKAFGLAGLRVGYAVANENIL-- 232 (351)
T ss_pred CCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-ccchHHH--hh-hCCCEEEEecchHhcccchhceeeeecCHHHH--
Confidence 99999777766654 5678899999998763 3222222 22 24689999999999999999999999998875
Q ss_pred CCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEECC
Q 045431 299 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQFP 377 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~ 377 (433)
+.+..... ....+.++|.++.+++++ .++++..+.++++++.+.+.|++. |+.+.+ .+|+|+|++++
T Consensus 233 ------~~~~~~~~--~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~-~~~~~~~i~~~ 300 (351)
T PRK14807 233 ------KYLNLVKS--PYNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYP-SKTNFILVKFK 300 (351)
T ss_pred ------HHHHHccC--CCCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc-CCccEEEEEcC
Confidence 55554432 244788999999999974 245666778888999999999876 887654 57889999997
Q ss_pred CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 378 GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 378 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
+..++...++ ++||.+.++..+ ...++++||+++ +.++.+.+++.|++++
T Consensus 301 --~~~~~~~~l~-~~gV~v~~~~~~-~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 --DADYVYQGLL-ERGILVRDFSKV-EGLEGALRITVS-SCEANDYLINGLKELL 350 (351)
T ss_pred --CHHHHHHHHH-HCCEEEEECCCC-CCCCCeEEEEcC-CHHHHHHHHHHHHHhh
Confidence 3455555555 559999876432 234679999985 4566777777777654
No 95
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-42 Score=330.54 Aligned_cols=318 Identities=20% Similarity=0.257 Sum_probs=248.2
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL 142 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l 142 (433)
...|+|+.|++++++|+.+ .. .....|++ .+.++||+++|+++ ++++++|++|+|+++++.++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~------~~------~~~~~Yp~-~~~~~Lr~aia~~~----~~~~~~I~it~Gs~~~i~~~ 93 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL------DL------ARLNRYPE-CQPPELINAYSAYA----GVAPEQILTSRGADEAIELL 93 (354)
T ss_pred CCcEEeeCCCCCCCCChhh------hh------HHhccCCC-CCHHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHH
Confidence 3569999999988877543 11 22456754 46899999999997 89999999999999999984
Q ss_pred -HHhcCCC-CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCCCCCccEEEEcCCCCccc
Q 045431 143 -QIVFGSN-VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LSTVARTDIIFFCSPNNPTG 219 (433)
Q Consensus 143 -~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~p~nPtG 219 (433)
..++++| |+|++++|+|+.|...++..| .+++.++.+.+..+..+ ++..+++++|++||||||||
T Consensus 94 ~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~~~~~li~i~nP~NPTG 161 (354)
T PRK04635 94 IRAFCEPGQDSIACFGPTYGMYAISAETFN------------VGVKALPLTADYQLPLDYIEQLDGAKLVFICNPNNPTG 161 (354)
T ss_pred HHHhcCCCCCeEEEcCCChHHHHHHHHHcC------------CEEEEEecCCCCCCCHHHHHhccCCCEEEEeCCCCCCC
Confidence 6777888 999999999999988888888 47888888643332222 22236889999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
.+++.+++++|+++|+ +++||+||+|.+|.... +...+....+++++++||||++|++|+|+||++++++++
T Consensus 162 ~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~--- 233 (354)
T PRK04635 162 TVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPEY---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI--- 233 (354)
T ss_pred ccCCHHHHHHHHHhCC--CcEEEEeCchHhhccCc---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH---
Confidence 9999999999999876 49999999999876432 222222224678999999999999999999999998885
Q ss_pred CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-CeeecCCCccEEEEECCC
Q 045431 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG-FKVYGGKNAPYVWVQFPG 378 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~~~~~~~~~ 378 (433)
+.+.+.. .....+.+.|.++.+++.+.+.+++++.++.++++++.+.+.|++++ +.+.++ .|+|+|++++
T Consensus 234 -----~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~- 304 (354)
T PRK04635 234 -----EILMRVI--APYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKFD- 304 (354)
T ss_pred -----HHHHhhc--CCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEECC-
Confidence 5555432 23456788888889999866556678888899999999999999985 777665 6789999987
Q ss_pred CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 379 RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 379 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
+..++.. +++++||.++++..+ ..++++|||+ .+.++++.++++|++.
T Consensus 305 -~~~~~~~-~l~~~gv~v~~~~~~--~~~~~lRis~-~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 305 -DVDAVFK-ALWDAGIVARAYKDP--RLANCIRFSF-SNRAETDKLIGLIRNQ 352 (354)
T ss_pred -CHHHHHH-HHHHCCEEEEECCCC--CCCCeEEEEe-CCHHHHHHHHHHHHHh
Confidence 3445544 456679999865432 2357999997 5789999999999764
No 96
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-42 Score=328.92 Aligned_cols=316 Identities=19% Similarity=0.297 Sum_probs=248.2
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
..|+|+.+++++++|+.+ . ......| |.....+|++++++++ ++++++|++|+|+++++.+ +
T Consensus 29 ~~~~l~~Nenp~~~~~~~--------~----~~~~~~Y-p~~~~~~l~~~~a~~~----g~~~~~I~~~~Gs~e~i~~~~ 91 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQL--------T----QQTLNRY-PECQPKAVIENYAAYA----GVKPEQVLVSRGADEGIELLI 91 (351)
T ss_pred CceEecCCCCCCCCChhh--------c----ccccccC-CCCChHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence 469999999988877643 1 0234567 4445689999999997 8999999999999999998 4
Q ss_pred HHhcCCC-CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC----CCCccEEEEcCCCCc
Q 045431 143 QIVFGSN-VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST----VARTDIIFFCSPNNP 217 (433)
Q Consensus 143 ~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~p~nP 217 (433)
..++++| |.|++++|+|+.|...++..| .+++.++.+.+ +..+++. ..++++|++||||||
T Consensus 92 ~~~~~~g~~~vli~~P~y~~y~~~~~~~G------------~~~~~v~~~~~--~~~d~~~l~~~~~~~~lv~l~nPnNP 157 (351)
T PRK01688 92 RAFCEPGKDAILYCPPTYGMYSVSAETIG------------VEIRTVPTLDN--WQLDLPAIADNLDGVKVVYVCSPNNP 157 (351)
T ss_pred HHhcCCCCCEEEEcCCCHHHHHHHHHHcC------------CEEEEeecCCC--CCCCHHHHHHhccCCcEEEEeCCCCC
Confidence 6677887 999999999999999999888 47888887543 3333221 257899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~ 297 (433)
||++++.+++++|++.|++ +.+||+||+|.+|.... +...+....+++++++||||+||++|+|+||++++++++
T Consensus 158 TG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i- 232 (351)
T PRK01688 158 TGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVI- 232 (351)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHH-
Confidence 9999999999999999886 68899999999886432 222221224689999999999999999999999998885
Q ss_pred cCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEEC
Q 045431 298 SDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQF 376 (433)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~ 376 (433)
+.+.+... .+..+.++|.++.++|.+.+.+++++.++.++++++++.+.|+++ ++....|++++|+|+++
T Consensus 233 -------~~l~~~~~--~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~ 303 (351)
T PRK01688 233 -------NLLLKVIA--PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARF 303 (351)
T ss_pred -------HHHHhccC--CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc
Confidence 55654432 344677888888888886555677888899999999999999988 66545567899999998
Q ss_pred CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHH
Q 045431 377 PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFK 429 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~ 429 (433)
+ +..++...|++ +||.++++..|. ..++++||++. +.++++.++++|+
T Consensus 304 ~--~~~~l~~~L~~-~gi~vr~~~~~~-~~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 304 T--ASSAVFKSLWD-QGIILRDQNKQP-GLSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred C--CHHHHHHHHHH-CCeEEEECCCcC-CCCCeEEEeCC-CHHHHHHHHHhhC
Confidence 6 45667777765 599999876552 23679999985 6788998888763
No 97
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3.3e-42 Score=328.12 Aligned_cols=323 Identities=20% Similarity=0.368 Sum_probs=258.5
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR- 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~- 141 (433)
+++|+|+.|++++++|+.+.+++.++... ...|+++.+ ++||+++|+++ ++++++|++|+|+++++..
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~y~~~~~-~~lr~~ia~~~----~~~~~~i~~~~G~~~~l~~~ 87 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADK------LHRYPDPDP-AELKQALADYY----GVDPEQILLGNGSDEIIELL 87 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHH------hhcCCCCCH-HHHHHHHHHHh----CcChHHEEEcCCHHHHHHHH
Confidence 47999999999999999999999987632 356766655 99999999998 6888999999999999986
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCcc
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPT 218 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPt 218 (433)
+..++++||+|++++|+|+.+....+..| .+++.++.+.++..+.+ +++ .+++++|++++|||||
T Consensus 88 ~~~l~~~gd~v~~~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~Npt 155 (346)
T TIGR01141 88 IRAFLEPGDAVLVPPPTYSMYEISAKIHG------------AEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPT 155 (346)
T ss_pred HHHhcCCCCEEEEcCCCHHHHHHHHHHcC------------CeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCC
Confidence 57778999999999999998888888888 47888887654222211 221 3578999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccccc
Q 045431 219 GAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 219 G~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~ 298 (433)
|.+++.++++++++.++ +++++|+||+|+++...+.+.+... ..+++++++|+||++|++|+|+||++++++++
T Consensus 156 G~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~---~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~-- 229 (346)
T TIGR01141 156 GNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTLPLLA---EYPNLIVLRTLSKAFGLAGLRIGYAIANAEII-- 229 (346)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCccHHHHHh---hCCCEEEEehhhHhhhchhhhceeeecCHHHH--
Confidence 99999999999999887 7999999999997665422222221 13468999999999988999999999988874
Q ss_pred CCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEEEEECC
Q 045431 299 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYVWVQFP 377 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~~~~~~ 377 (433)
+.+..... ..+.+.++|.++.++++.. .++++.+++++++++.+.+.|+++ |+.+.+ .+|+|+|+.++
T Consensus 230 ------~~~~~~~~--~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~ 298 (346)
T TIGR01141 230 ------DALNKVRA--PFNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRFP 298 (346)
T ss_pred ------HHHHhccC--CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEecC
Confidence 55554332 3456889999998888754 367888999999999999999988 888654 57899999998
Q ss_pred CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHH
Q 045431 378 GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFK 429 (433)
Q Consensus 378 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~ 429 (433)
. ++.++...+.+ +||.+.||..|+.. ++++|+++. ++++++++++.|+
T Consensus 299 ~-~~~~~~~~L~~-~gI~v~~g~~f~~~-~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 299 R-DADALFEALLE-KGIIVRDLNSYPGL-PNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred C-CHHHHHHHHHH-CCeEEEeCCCcCCC-CCeEEEecC-CHHHHHHHHHHhC
Confidence 6 66677776665 59999999988544 789999975 7889999988763
No 98
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.8e-41 Score=319.78 Aligned_cols=305 Identities=17% Similarity=0.212 Sum_probs=233.9
Q ss_pred ceEEecCCCCCCCChH-HHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH
Q 045431 64 EVISLGIGDTTEPIPE-VITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l 142 (433)
++|+|+.+++++++|+ .+.+ ..+ ..|+. +..+||++|++++ + +++|++|+|++++|.++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~---~~~---------~~yp~--~~~~Lr~~ia~~~----~--~~~I~it~Gs~~al~~~ 80 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA---DAW---------ARLPE--TDDGLEAAARAYY----G--APQLLPVAGSQAAIQAL 80 (330)
T ss_pred HheeecCCcCCCCCCCcccCH---HHH---------HhCCC--ChHHHHHHHHHHh----C--CCCEEECcCHHHHHHHH
Confidence 5799999987765542 2211 111 23533 4489999999997 4 47999999999999986
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCC
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAA 222 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~ 222 (433)
. .+.+||+|++++|+|+.+...++.+| .+++.++.+.. .. ...++++++++|||||||.++
T Consensus 81 ~-~~~~gd~v~v~~P~y~~~~~~~~~~g------------~~~~~v~~~~~---~~---~~~~~~~v~l~nP~NPTG~~~ 141 (330)
T PRK05664 81 P-RLRAPGRVGVLSPCYAEHAHAWRRAG------------HQVRELDEAEV---EA---ALDSLDVLVVVNPNNPTGRRF 141 (330)
T ss_pred H-HccCCCEEEEcCCChHHHHHHHHHcC------------CeEEEechhhH---hh---hhcCCCEEEEeCCcCCCCCcc
Confidence 4 45899999999999999999999999 47777776421 11 123678899999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcc
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFP 302 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 302 (433)
+.+++++|+++|++++++||+||+|.++.. ..++.+++. .+++++++||||++|+||+|+||++++++++
T Consensus 142 s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~---~~s~~~~~~-~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~------ 211 (330)
T PRK05664 142 DPARLLAWHARLAARGGWLVVDEAFMDNTP---QHSLAACAH-RPGLIVLRSFGKFFGLAGARLGFVLAEPALL------ 211 (330)
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCcccCCC---ccccccccc-CCCEEEEeeccccccCCCcceEEEEeCHHHH------
Confidence 999999999999999999999999987642 234555543 4689999999999999999999999998875
Q ss_pred hhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChH
Q 045431 303 VAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSW 382 (433)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~ 382 (433)
+.+..... .+..+.++|.++.++|.+. .+.++.++.++++++.+.+.|+++|+...+ ..++|+|++++ ++.
T Consensus 212 --~~~~~~~~--~~~~~~~~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~f~~~~~~--~~~ 282 (330)
T PRK05664 212 --RALAELLG--PWTVSGPTRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRHGLTPAG-GCALFQWVRTE--DAA 282 (330)
T ss_pred --HHHHHhcC--CCCCCHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CcceEEEEecC--CHH
Confidence 55654432 3356889999999999753 445778899999999999999998765322 23478999875 455
Q ss_pred HHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 383 DVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 383 ~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
++...+. ++||.+.+ |+ ..+++||++..+.++++++++.|+++.
T Consensus 283 ~~~~~l~-~~gi~v~~---f~--~~~~iRis~~~~~~~~~~l~~al~~~~ 326 (330)
T PRK05664 283 ALHEFLA-RRGILTRL---FE--QPASLRFGLPADEADWARLDQALLAYR 326 (330)
T ss_pred HHHHHHH-HCCeEEEE---CC--CCCeEEEECCCCHHHHHHHHHHHHHHH
Confidence 6666654 56999974 43 347999998766667777777776553
No 99
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.1e-41 Score=324.53 Aligned_cols=323 Identities=22% Similarity=0.342 Sum_probs=252.2
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEE-cCChHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFV-SDGAKCDISR 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~-~~G~~~al~~ 141 (433)
.++|+|+.|++++++++.+.+++.+.+.. ...|+++ ..++||+++|+++ ++++++|++ |+|+++++.+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~------~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 34 ESIIKLGSNENPLGPSPKAVEAIEKELSK------IHRYPEP-DAPELREALSKYT----GVPVENIIVGGDGMDEVIDT 102 (361)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHHHHHh------hcCCCCC-CHHHHHHHHHHHh----CCCHHHEEEeCCCHHHHHHH
Confidence 47899999999888888889888887643 2457554 4499999999998 888999999 7999999987
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCc
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNP 217 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nP 217 (433)
+..++++||+|++++|+|+.+...++..| .+++.++.+.+.....+ +++ ..+++++++++||||
T Consensus 103 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~np 170 (361)
T PRK00950 103 LMRTFIDPGDEVIIPTPTFSYYEISAKAHG------------AKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNP 170 (361)
T ss_pred HHHHhcCCCCEEEEcCCChHHHHHHHHHcC------------CEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCC
Confidence 46677999999999999999988888888 47777775433222211 221 257889999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~ 297 (433)
||.+++.+++.+| |+++|+++|+||+|.++. .....++. + ..+++++++||||++|++|+|+||++++++++
T Consensus 171 tG~~~~~~~l~~l---~~~~~~~li~De~y~~~~-~~~~~~~~--~-~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~- 242 (361)
T PRK00950 171 TGNLIPEEDIRKI---LESTDALVFVDEAYVEFA-EYDYTPLA--L-EYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLI- 242 (361)
T ss_pred CCCCcCHHHHHHH---HHHCCcEEEEECchhhhC-ccchHHHH--H-hcCCEEEEEeehHhhcCchhhcchhcCCHHHH-
Confidence 9999997665555 567899999999999875 22222221 1 23578999999999999999999999998875
Q ss_pred cCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC
Q 045431 298 SDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP 377 (433)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~ 377 (433)
+.+.+... ....+.++|.++.+++++ ..++++.++.++++++.+.+.|. +.+. +.+++|+|++++
T Consensus 243 -------~~~~~~~~--~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~~i~~~~~ 307 (361)
T PRK00950 243 -------DYYMRAKT--PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVY-PSEANFVLVDVT 307 (361)
T ss_pred -------HHHHHhcC--CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeEC-CCcceEEEEECC
Confidence 55554432 344778899988888874 34577888888888888888776 4544 468899999997
Q ss_pred CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhhC
Q 045431 378 GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 378 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+.+..++...+.+ +||.+.||..|+..+++++||++. +.+++++++++|+++++
T Consensus 308 ~~~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 308 PMTAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIVE 361 (361)
T ss_pred CCCHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHhC
Confidence 6677788888765 499999999886556789999986 67799999999998874
No 100
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=303.09 Aligned_cols=315 Identities=22% Similarity=0.324 Sum_probs=262.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhc----cCCCCCCcEEEcCChHHHHHHH-HHhcCCCCEEEEeCCCChhhhhhHHHhCCc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYK----DLGIEEGDIFVSDGAKCDISRL-QIVFGSNVTMAVQDPSYPAYVDSSVIMGQT 172 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~----~~~~~~~~i~~~~G~~~al~~l-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~ 172 (433)
+..|.+-.|.+.+|+++|+++.+ ....+|+++++++|++.+.+++ ..+++|||..+++.|.|+++..-++...
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rT-- 191 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRT-- 191 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceecc--
Confidence 44677778999999999999975 3445899999999999999985 7788999999999999999976665543
Q ss_pred ccccccccccceEEEeecCccCCcccCCCC-----------CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 045431 173 GEFQKDAEKYGKIEYMRCTAENGFFPDLST-----------VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSII 241 (433)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~l 241 (433)
| .+++++.+...+++..+.++ ..+++.++++||+||.|++++++++..++++|.++++.+
T Consensus 192 g---------veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHv 262 (471)
T KOG0256|consen 192 G---------VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHV 262 (471)
T ss_pred C---------ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEE
Confidence 2 48888888877776665332 247899999999999999999999999999999999999
Q ss_pred EEeccccccccCCC-CCcccccCC----CCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccC
Q 045431 242 VYDSAYALYISDDN-PRSIFEIPG----AKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFN 316 (433)
Q Consensus 242 i~De~~~~~~~~~~-~~~~~~~~~----~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (433)
|+||+|+.-+|+.. ..++.++.. .+++|.++.|+||.+|+||+|+|.+...++.+ .....++ .+..
T Consensus 263 I~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~V-------vsaA~km--ssf~ 333 (471)
T KOG0256|consen 263 ISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDV-------VSAATKM--SSFG 333 (471)
T ss_pred EeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHH-------HHHHHHH--hhcc
Confidence 99999999888764 566655421 36789999999999999999999999887775 3333332 3455
Q ss_pred CCcHHHHHHHHHhcCcCCh--hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC-------CChHHHHHH
Q 045431 317 GASNISQAGGLACLSPEGF--KAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG-------RSSWDVFSE 387 (433)
Q Consensus 317 ~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~-------~~~~~~~~~ 387 (433)
..|+..|..+..+|.+... .++.+..++++.+.+++.+.|+++|+.+.+..+|+|+|+++.+ ....++...
T Consensus 334 ~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~ 413 (471)
T KOG0256|consen 334 LVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWER 413 (471)
T ss_pred CCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHH
Confidence 6899999999999997554 5789999999999999999999999999999999999999872 123467778
Q ss_pred HHHcCCeEecCCCCCCCCCCCeEEEeeccC-hhHHHHHHHHHHHhh
Q 045431 388 ILEKTHVVTTPGSGFGPGGEGFIRVSAFGH-RGNVLEACKRFKHLY 432 (433)
Q Consensus 388 l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~-~~~l~~~l~~l~~~l 432 (433)
++.+-++-+.||..|....+||||++|+.. ++.++-+++||++.+
T Consensus 414 i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~ 459 (471)
T KOG0256|consen 414 ILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFL 459 (471)
T ss_pred HHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHH
Confidence 887779999999999888899999999875 555555999999875
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-41 Score=317.23 Aligned_cols=311 Identities=21% Similarity=0.337 Sum_probs=234.7
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL 142 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l 142 (433)
.++|+|+.+++++++|+.+.+++.+++.. .....|+ ..|.++||+++++|+ ++++++|++|+|+++++.++
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~-~~g~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~ 88 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKR----VPFNRYP-HITSDPLREAIAEFY----GLDAENIAVGNGSDELISYL 88 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhc----CccccCC-CCCHHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHH
Confidence 35799999999988889999999888753 2345785 579999999999998 78999999999999999986
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CC-CCCCccEEEEcCCCCcccc
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LS-TVARTDIIFFCSPNNPTGA 220 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~l~~p~nPtG~ 220 (433)
...+ +||+|++++|+|+.+....+..| .+++.++.+.+.+.+.+ ++ ...++++++++|||||||.
T Consensus 89 ~~~~-~gd~V~v~~P~y~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~v~~~~P~NPtG~ 155 (337)
T PRK03967 89 VKLF-EGKHIVITPPTFGMYSFYAKLNG------------IPVIDVPLKEDFTIDGERIAEKAKNASAVFICSPNNPTGN 155 (337)
T ss_pred HHHh-CCCeEEEeCCChHHHHHHHHHcC------------CeEEEeecCCCCCcCHHHHHHhccCCCEEEEeCCCCCCCC
Confidence 5555 79999999999999888888888 47888887643222221 22 1357889999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCC
Q 045431 221 AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDG 300 (433)
Q Consensus 221 ~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~ 300 (433)
+++.+++.+++ +++++||+||+|.+|... ...++. ...+++|+++||||.||++|+|+||++++++++
T Consensus 156 ~~~~~~l~~i~----~~~~~ii~De~y~~~~~~-~~~~~~---~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i---- 223 (337)
T PRK03967 156 LQPEEEILKVL----ETGKPVVLDEAYAEFSGK-SLIGLI---DEYPNLILLRTFSKAFGLAGIRAGYAIANEEII---- 223 (337)
T ss_pred CCCHHHHHHHH----hcCCEEEEECchhhhccc-chHHHH---hhCCCEEEEecchHhhcchhhhheeeecCHHHH----
Confidence 99977666654 479999999999987532 111221 124579999999999999999999999998875
Q ss_pred cchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCC
Q 045431 301 FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRS 380 (433)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~ 380 (433)
+.+.+... ..+.+.++|.++..++++ .+++.+.++.+.++++.+.+.|.+. ..+.+++|+|++++
T Consensus 224 ----~~~~~~~~--~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~--- 288 (337)
T PRK03967 224 ----DALYRIKP--PFSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY----AYPSDANFLLLKLD--- 288 (337)
T ss_pred ----HHHHhhcC--CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhHH---
Confidence 66665443 345789999999988874 3345556666677788888888764 23578999999874
Q ss_pred hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHH
Q 045431 381 SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFK 429 (433)
Q Consensus 381 ~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~ 429 (433)
+...+++ +||.++++.. ...+++||++.. +.+++.++++++.
T Consensus 289 ---~~~~l~~-~gi~v~~~~~---~~~~~~Ri~~~~~~~~~~l~~~l~~~~ 332 (337)
T PRK03967 289 ---AYDYLLE-NGIVVRKLSG---RLEGHIRVTVGKREENDEFIKALKEIK 332 (337)
T ss_pred ---HHHHHHH-CCEEEEeCCC---CCCCeEEEecCCHHHHHHHHHHHHHHH
Confidence 4555555 5999987642 235799999854 2344555555443
No 102
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4e-41 Score=321.19 Aligned_cols=322 Identities=23% Similarity=0.346 Sum_probs=251.1
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
.+|+|+.+.+++++|+.+.+++.+.+.. ...| +..|..+||+++|+++ ++++++|++|+|+++++.+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~------~~~y-~~~g~~~lr~~ia~~~----~~~~~~I~~~~G~~~~l~~~~ 91 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG------VNRY-PDMGAVELRAALAEHL----GVPPEHVAVGCGSVALCQQLV 91 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh------cCcC-CCCcHHHHHHHHHHHh----CcCHHHEEECCCHHHHHHHHH
Confidence 5899999999988888999999887642 3457 4579999999999998 7888999999999999987 4
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccc
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTG 219 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG 219 (433)
..++++||.|+++.|+|..+...++..| .+++.++.+++.+...+ +++ .++++++++++||||||
T Consensus 92 ~~~~~~gd~Vli~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 159 (352)
T PRK03321 92 QATAGPGDEVIFAWRSFEAYPILVQVAG------------ATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTG 159 (352)
T ss_pred HHhcCCCCEEEeCCCCHHHHHHHHHHcC------------CEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcC
Confidence 6778999999999999999888888888 47788887643333222 211 25789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC-CcccccCCCCcceEEEecccccccccccceeeeecccccccc
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~ 298 (433)
.+++.+++.++++.+ +++++||+||+|.++.+++.. .++..++. .+++++++||||.+|++|+|+||++++++++
T Consensus 160 ~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~-- 235 (352)
T PRK03321 160 TVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRD-HPNVVVLRTFSKAYGLAGLRVGYAVGHPEVI-- 235 (352)
T ss_pred CCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhh-CCCEEEEecchHHhhhHHHhhhhhcCCHHHH--
Confidence 999988888888765 479999999999998876532 33333332 4689999999999999999999999998875
Q ss_pred CCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC
Q 045431 299 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG 378 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~ 378 (433)
+.+.+. ....+.+.++|.++.+++... ..+. +..+.+.++++.+.+.|++.|+.+.+ .+|+|+|++++.
T Consensus 236 ------~~~~~~--~~~~~~s~~~q~~a~~~l~~~-~~~~-~~~~~~~~~r~~~~~~L~~~~~~~~~-~~g~~i~i~l~~ 304 (352)
T PRK03321 236 ------AALRKV--AVPFSVNSLAQAAAIASLAAE-DELL-ERVDAVVAERDRVRAALRAAGWTVPP-SQANFVWLPLGE 304 (352)
T ss_pred ------HHHHHh--cCCCCCCHHHHHHHHHHhcCH-HHHH-HHHHHHHHHHHHHHHHHHHCCCccCC-CCCCEEEEeCCC
Confidence 566544 234568999999888888732 2333 34445556677889999988877644 578999999863
Q ss_pred CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 379 RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 379 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
...++...+ +++||.+.+ |+ ..++||++ .+.+++++++++|++++
T Consensus 305 -~~~~~~~~l-~~~gI~v~~---~~---~~~iRi~~-~~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 305 -RTADFAAAA-AEAGVVVRP---FA---GEGVRVTI-GAPEENDAFLRAARAWR 349 (352)
T ss_pred -CHHHHHHHH-HHCCEEEEc---cC---CCcEEEee-CCHHHHHHHHHHHHHHh
Confidence 456666665 556999987 43 34699997 67888999999988765
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=3.1e-41 Score=318.30 Aligned_cols=313 Identities=19% Similarity=0.289 Sum_probs=245.8
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
++++++|+.|.+++++| ..+ ... .....|+++.+ ++||+.+++++ ++++++|++|+|+++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~--~~~---~~~------~~~~~y~~~~~-~~lr~~la~~~----~~~~~~i~~t~G~~~~i~~ 79 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPP--VPP---IPA------SAWARYPDPEY-DELRAAAAAYY----GLPAASVLPVNGAQEAIYL 79 (330)
T ss_pred hhheeEccccCCCCCCC--hhh---cch------HHHhhCCCccH-HHHHHHHHHHh----CCChhhEEECCCHHHHHHH
Confidence 44689999999887766 111 111 33457866665 99999999998 7888999999999999998
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccC
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~ 221 (433)
+..++.+| .|++++|+|..+...++..| .+++.++ +.+ .+... ..+++++++++||||||.+
T Consensus 80 ~~~~l~~g-~vl~~~p~y~~~~~~~~~~g------------~~~~~~~-d~~-~l~~~---~~~~~~v~i~~p~NPtG~~ 141 (330)
T TIGR01140 80 LPRLLAPG-RVLVLAPTYSEYARAWRAAG------------HEVVELP-DLD-RLPAA---LEELDVLVLCNPNNPTGRL 141 (330)
T ss_pred HHHHhCCC-eEEEeCCCcHHHHHHHHHcC------------CEEEEeC-CHH-HHHhh---cccCCEEEEeCCCCCCCCC
Confidence 76667888 79999999999999998888 4666666 221 22211 2457789999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCc
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF 301 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~ 301 (433)
++.+++++|+++|+++|++||+||+|.++.... ++..+....+++++++||||++|++|+|+||++++++++
T Consensus 142 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~----- 213 (330)
T TIGR01140 142 IPPETLLALAARLRARGGWLVVDEAFIDFTPDA---SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALL----- 213 (330)
T ss_pred CCHHHHHHHHHHhHhcCCEEEEECcccccCCcc---chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHH-----
Confidence 999999999999999999999999999876542 233322224679999999999999999999999998874
Q ss_pred chhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-CeeecCCCccEEEEECCCCC
Q 045431 302 PVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG-FKVYGGKNAPYVWVQFPGRS 380 (433)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~~~~~~~~~~~ 380 (433)
+.+..... ....+.++|.++.+++++. .+.++.++.++++++.+.+.|++++ +.+. +.+|+|+|++++.
T Consensus 214 ---~~l~~~~~--~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-- 283 (330)
T TIGR01140 214 ---ARLREALG--PWTVNGPARAAGRAALADT--AWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-- 283 (330)
T ss_pred ---HHHHhcCC--CCCchHHHHHHHHHHHhch--HHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC--
Confidence 55554432 3457889999999999754 3457788999999999999999986 5554 4588999999873
Q ss_pred hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHH
Q 045431 381 SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRF 428 (433)
Q Consensus 381 ~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l 428 (433)
..++.+.+++ +||.+.||..|...+.+++||+++...++ +.++++|
T Consensus 284 ~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 284 AAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred HHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 5677777766 59999999999644567999999776655 7777765
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.2e-39 Score=304.86 Aligned_cols=300 Identities=16% Similarity=0.281 Sum_probs=219.5
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQ 143 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~ 143 (433)
++|+|+.++++++ |+.+.+++.+++.. ...|+ ....||+++++++ + ++|++|+|+++++.++.
T Consensus 9 ~~i~l~~~~np~~-p~~~~~a~~~~~~~------~~~yp---~~~~l~~~ia~~~----~---~~I~vt~G~~~al~~~~ 71 (311)
T PRK08354 9 GLIDFSASVNPYP-PEWLDEMFERAKEI------SGRYT---YYEWLEEEFSKLF----G---EPIVITAGITEALYLIG 71 (311)
T ss_pred ceeEecCCCCCCC-CHHHHHHHHHHHHH------hhcCC---ChHHHHHHHHHHH----C---CCEEECCCHHHHHHHHH
Confidence 5899999988775 57888888877542 23563 2578999999987 4 58999999999999865
Q ss_pred HhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCC
Q 045431 144 IVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAAT 223 (433)
Q Consensus 144 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~ 223 (433)
.++.+||+|++++|+|+.+...++..|. +++.++.+.+ .+. . ...++++++++|||||||.+++
T Consensus 72 ~~~~~gd~vlv~~P~y~~~~~~~~~~g~------------~~~~~~~d~~-~l~-~--~~~~~~~vi~~~P~NPTG~~~~ 135 (311)
T PRK08354 72 ILALRDRKVIIPRHTYGEYERVARFFAA------------RIIKGPNDPE-KLE-E--LVERNSVVFFCNPNNPDGKFYN 135 (311)
T ss_pred HhhCCCCeEEEeCCCcHHHHHHHHHcCC------------EEeecCCCHH-HHH-H--hhcCCCEEEEecCCCCCCCccC
Confidence 6666999999999999999999999994 6655554322 111 1 1125678899999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
.+++++|+++|+++|++||+||+|.+|.+++.. .. .+++++++||||++|+||+|+||+++ .
T Consensus 136 ~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~-----~~--~~~vi~~~S~SK~~~l~GlRiG~~v~---~-------- 197 (311)
T PRK08354 136 FKELKPLLDAVEDRNALLILDEAFIDFVKKPES-----PE--GENIIKLRTFTKSYGLPGIRVGYVKG---F-------- 197 (311)
T ss_pred HHHHHHHHHHhhhcCcEEEEeCcchhccccccc-----cC--CCcEEEEeccHhhcCCccceeeeeee---h--------
Confidence 999999999999999999999999998876421 11 46899999999999999999999998 3
Q ss_pred hHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChHH
Q 045431 304 AKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWD 383 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~ 383 (433)
.+.+..... .+..+.+.|.++.++++ ...+++++.++.++++++.+.+.+ ..++ .+.|+|++++ ++.+
T Consensus 198 ~~~l~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l------~~~~-~~~~~~~~~~--~~~~ 265 (311)
T PRK08354 198 EEAFRSVRM--PWSIGSTGYAFLEFLIE-DDFEHLRKTMPLIWREKERFEKAL------YVKS-DANFFIKDVG--DAEK 265 (311)
T ss_pred HHHHHHcCC--CccCCHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhc------CCCC-CCcEEEEECC--CHHH
Confidence 244544332 33456677777766666 333555666666666665554443 1234 4566667765 4556
Q ss_pred HHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHH
Q 045431 384 VFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 384 ~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
+.+.+. ++||.+.||..|+. ++++||++.. .++.+++++.|++
T Consensus 266 ~~~~l~-~~gv~v~~g~~f~~--~~~iRi~~~~-~~~~~~l~~al~~ 308 (311)
T PRK08354 266 FVEFLK-RNGILVRDCTSFGL--PGYIRFSVRD-REENEKLIRALRE 308 (311)
T ss_pred HHHHHH-HCCeEEEecccCCC--CCeEEEEeCC-HHHHHHHHHHHHH
Confidence 666654 56999999999963 5899999864 3344444444444
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=298.87 Aligned_cols=314 Identities=21% Similarity=0.302 Sum_probs=253.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhc---cCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCc
Q 045431 97 GYSGYGAEQGEKPLRAAIASTFYK---DLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQT 172 (433)
Q Consensus 97 ~~~~Y~~~~g~~~lr~~la~~l~~---~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~ 172 (433)
...+|++..|.++|...+.++..- .......+|++|+|.+.++.. +..++++||.|+++.++|++.....+..|
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~g-- 169 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALG-- 169 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccC--
Confidence 456999999999999999996531 222345699999999999996 78899999999999999999998888888
Q ss_pred ccccccccccceEEEeecCccCCcccCCCC-----------CCCccEEEEcCC--CCccccCCCHHHHHHHHHHHHHcCC
Q 045431 173 GEFQKDAEKYGKIEYMRCTAENGFFPDLST-----------VARTDIIFFCSP--NNPTGAAATREQLTRLVQFAKDNGS 239 (433)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~i~l~~p--~nPtG~~~~~~~~~~i~~~a~~~~~ 239 (433)
++++++++|.++-..+.+++ .++++++| |-| |||||.+++.+++++|.++|+||++
T Consensus 170 ----------v~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlY-TIPTgqNPTG~tls~errk~iy~LArKyDf 238 (472)
T KOG0634|consen 170 ----------VKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLY-TIPTGQNPTGNTLSLERRKKIYQLARKYDF 238 (472)
T ss_pred ----------ceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEE-eCcCCCCCCCCccCHHHHHHHHHHHHHcCE
Confidence 58888888765433222321 24566555 545 9999999999999999999999999
Q ss_pred EEEEeccccccccCC---C------C-----------CcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 240 IIVYDSAYALYISDD---N------P-----------RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 240 ~li~De~~~~~~~~~---~------~-----------~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
+||+||.|..+.+.. . + +++.++|. .+|||-..||||.++ ||+|+||+.+++-++
T Consensus 239 LIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDt-dGrVIr~dSFSKiia-PGlRlG~it~~~~~l--- 313 (472)
T KOG0634|consen 239 LIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDT-DGRVIRNDSFSKIIA-PGLRLGWITGNSLFL--- 313 (472)
T ss_pred EEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccc-cccEEeccchhhhhc-CcceeEEeecCHHHH---
Confidence 999999999776652 1 1 12233443 579999999999997 999999999999886
Q ss_pred CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh----hHHHHHHHHHHHHHHHHHHHHhhc---C-CeeecCCCccE
Q 045431 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF----KAVHEVIGFYKENTDIIVETFNSL---G-FKVYGGKNAPY 371 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~---g-~~~~~~~~g~~ 371 (433)
+++.+....++.++|.++|.+..++|+..+. +|+.+++..|..|++.+..+|.++ + .++.+|.+|+|
T Consensus 314 -----~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmF 388 (472)
T KOG0634|consen 314 -----KRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMF 388 (472)
T ss_pred -----HHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceE
Confidence 6777667777777999999988888875443 799999999999999999999886 4 67889999999
Q ss_pred EEEECC--------CCC-hHHHHHHHHHcCCeEecCCCCCCCC-----CCCeEEEee-ccChhHHHHHHHHHHHhhC
Q 045431 372 VWVQFP--------GRS-SWDVFSEILEKTHVVTTPGSGFGPG-----GEGFIRVSA-FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 372 ~~~~~~--------~~~-~~~~~~~l~~~~gi~v~~g~~f~~~-----~~~~iRi~~-~~~~~~l~~~l~~l~~~l~ 433 (433)
+|++++ ..+ .++....++.++||.+.+|..|... ++-++|+++ +.+.++++++++|+..+++
T Consensus 389 iwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ik 465 (472)
T KOG0634|consen 389 IWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIK 465 (472)
T ss_pred EEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 999996 122 4566677777889999999999643 234999997 4588999999999988764
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.4e-35 Score=283.25 Aligned_cols=339 Identities=32% Similarity=0.540 Sum_probs=270.0
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHHH-H
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~~-l 142 (433)
|+|+.|++++..++...+++.+. .. ......|++..|..++++.+++++.. +....++++++++|+++++.. +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAA--AL--RAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHH--hh--ccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 57899998877777777666651 11 14556788899999999999999975 333457899999999999987 5
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCccc---CCC--CCCCccEEEEcCCCCc
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP---DLS--TVARTDIIFFCSPNNP 217 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~i~l~~p~nP 217 (433)
..+.++||+|++++|+|.++...++..| ..++.++.+.++.... .++ ..+++++|++++|+||
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~ 144 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAG------------AEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNP 144 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCC------------CEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCC
Confidence 6677899999999999999999999888 4788888876554433 111 2468899999999999
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc-ccccCCCCcceEEEecccccccccccceeeeeccc-cc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS-IFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK-EL 295 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~-~~ 295 (433)
||.+++.+++++|+++|+++|+++|+|++|+.+.+.+.... +... ...+.+++++|++|.++++|+|+||+++++ .+
T Consensus 145 tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~ 223 (350)
T cd00609 145 TGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALL-DAYERVIVLRSFSKTFGLPGLRIGYLIAPPEEL 223 (350)
T ss_pred CCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCc-CccCcEEEEeecccccCCcccceEEEecCHHHH
Confidence 99999999999999999999999999999998776544322 1222 234568999999999988999999999998 55
Q ss_pred cccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCee-ecCCCccEEEE
Q 045431 296 LFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKV-YGGKNAPYVWV 374 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~g~~~~~ 374 (433)
+ +.+..........++...+.++..++.... +++++.++.++++++.+.+.|++.+... ..+.+|+++|+
T Consensus 224 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~ 294 (350)
T cd00609 224 L--------ERLKKLLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWL 294 (350)
T ss_pred H--------HHHHHHHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEE
Confidence 3 556655555556688888988888887543 5678889999999999999999985543 45678999999
Q ss_pred ECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHH
Q 045431 375 QFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKH 430 (433)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~ 430 (433)
.+++....+.+.++++++||.+.++..|...+..++|+++....+++++++++|++
T Consensus 295 ~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 295 DLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred ecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 99865556677777788899999998876556789999986669999999999863
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=6e-33 Score=269.82 Aligned_cols=332 Identities=13% Similarity=0.107 Sum_probs=241.9
Q ss_pred CCCCceEEecCCCC--CCCChH---HHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCC
Q 045431 60 YPDAEVISLGIGDT--TEPIPE---VITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDG 134 (433)
Q Consensus 60 ~~~~~~i~l~~g~~--~~~~~~---~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G 134 (433)
..+.++|+|+.|+| |+++|+ .+.+++.+++. .+...|++..|.++||+++++++ + .++|++|+|
T Consensus 33 ~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~-----~g~~~Y~~~~g~~~Lreaia~~~----~--~~~vv~t~g 101 (460)
T PRK13238 33 EAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMM-----RGDEAYAGSRSYYRLEDAVKDIF----G--YPYTIPTHQ 101 (460)
T ss_pred HcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHH-----hCCcccCCCCCHHHHHHHHHHHh----C--CCcEEECCC
Confidence 34567999999998 677766 57788888775 34468999999999999999998 3 357999999
Q ss_pred hHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCcc------CCcc--cCCCC---
Q 045431 135 AKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAE------NGFF--PDLST--- 202 (433)
Q Consensus 135 ~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~--- 202 (433)
+++++.+ +..+++||| |++++|.|..+...+...|. .++.++.+.. +++. .+++.
T Consensus 102 gt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~------------~~v~v~~~~~~~~~~~~~f~g~id~e~Le~ 168 (460)
T PRK13238 102 GRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGA------------TAVDLVIDEALDTGSRHPFKGNFDLEKLEA 168 (460)
T ss_pred HHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCC------------EEEEEeccccccccccccccCCcCHHHHHH
Confidence 9999997 577899999 99999999999988888884 6777776531 2232 33221
Q ss_pred --C----CCccEEEEcCCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccc--cccCC------CCCcccccCCCCc
Q 045431 203 --V----ARTDIIFFCSPNNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYAL--YISDD------NPRSIFEIPGAKE 267 (433)
Q Consensus 203 --~----~~~~~i~l~~p~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~--~~~~~------~~~~~~~~~~~~~ 267 (433)
. +++++|++++|||||| .+++.+++++|.++|++||++||+|+++.. ..+.. ...++.++
T Consensus 169 ~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i----- 243 (460)
T PRK13238 169 LIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI----- 243 (460)
T ss_pred HHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----
Confidence 1 3689999999999997 999999999999999999999999997742 22221 12233222
Q ss_pred ceEEEecccccccccccce------eeeeccc-cccccCCcchhHHHHHHH----hh-ccCCCcHHHHHHHHHhcCcCCh
Q 045431 268 VAIETSSFSKYAGFTGVRL------GWTVIPK-ELLFSDGFPVAKDFNRIV----CT-CFNGASNISQAGGLACLSPEGF 335 (433)
Q Consensus 268 ~vi~i~S~sK~~~~~G~r~------G~l~~~~-~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~q~~~~~~l~~~~~ 335 (433)
+..++|++|.+.++|+|+ |++++++ +++ +.++... .. +..+.+...|.|+...+++...
T Consensus 244 -~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~--------~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~ 314 (460)
T PRK13238 244 -AREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLF--------TECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD 314 (460)
T ss_pred -hhhhcccCcEEEEecccCCCCcceeEEEcChHHHH--------HHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC
Confidence 233456667666666665 3566664 342 4444332 11 2223345557766666653111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCC---------ChHHHHHHHHHcCCeEecCCCCCCCCC
Q 045431 336 KAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR---------SSWDVFSEILEKTHVVTTPGSGFGPGG 406 (433)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~f~~~~ 406 (433)
+.......+++++|.+.|.+.|+.+..|.+|+|+++++... .+.++..+|+++.||.+.|+..|....
T Consensus 315 ---~~~~~~~~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~ 391 (460)
T PRK13238 315 ---EDYLAYRIGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGR 391 (460)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceeccc
Confidence 12222223467999999999999999999999999998632 457799999999999999999885221
Q ss_pred -----------CCeEEEeecc---ChhHHHHHHHHHHHhh
Q 045431 407 -----------EGFIRVSAFG---HRGNVLEACKRFKHLY 432 (433)
Q Consensus 407 -----------~~~iRi~~~~---~~~~l~~~l~~l~~~l 432 (433)
...+||++.. +.++++.+.++|+.+.
T Consensus 392 ~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~ 431 (460)
T PRK13238 392 DPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVK 431 (460)
T ss_pred CCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 4789999866 8999999999998764
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-32 Score=235.18 Aligned_cols=343 Identities=19% Similarity=0.282 Sum_probs=246.6
Q ss_pred CceEEecCCCCCC-CC-hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHH
Q 045431 63 AEVISLGIGDTTE-PI-PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 63 ~~~i~l~~g~~~~-~~-~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~a 138 (433)
+..|.|+.|.|.. |- .....+...+.+.........-+|+.++|...|.+++++.+++ +|++++.||.+|+|++.+
T Consensus 30 ~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~ 109 (417)
T COG3977 30 PGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSA 109 (417)
T ss_pred CCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccch
Confidence 3589999999852 21 1122223333332211113345899999999999999999997 888999999999999999
Q ss_pred HHHHHHhc----CCC--CEEEE-eCCCChhhhhhHHHhCCcccccccccccceEEEeecCcc------CCcc--cC---C
Q 045431 139 ISRLQIVF----GSN--VTMAV-QDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAE------NGFF--PD---L 200 (433)
Q Consensus 139 l~~l~~l~----~~g--d~Vl~-~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~---~ 200 (433)
...+..++ ..| .+|++ ..|.|-+|.++... +-.++...++ +.|. .| +
T Consensus 110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~---------------~d~fVs~kP~iel~~~g~FKY~vDF~~l 174 (417)
T COG3977 110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLE---------------EDLFVSAKPNIELLPAGQFKYHVDFEHL 174 (417)
T ss_pred HHHHHHHhcCccCCCcceeEeeccChhhccccccccC---------------ccceeeccCCcccccccceeeccCHHHc
Confidence 88765554 344 34555 67888887654321 1112222221 1111 11 2
Q ss_pred CCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc
Q 045431 201 STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 201 ~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
...+.+.+|+++-|.||||.+++.+|+.+|-.+|++||+++|+|.+|+. -|.+--.+=.+ .-..+|++.+.|+||. |
T Consensus 175 ~i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~-~~w~~NiilC~SLSK~-G 251 (417)
T COG3977 175 HIGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDAT-PLWNENIILCMSLSKL-G 251 (417)
T ss_pred ccccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCceeccccc-ccCCCCEEEEeehhhc-C
Confidence 2246788999999999999999999999999999999999999999984 12111000001 1135789999999996 5
Q ss_pred ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHH--HHHHHHHHHHHHHHHHHHhh
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAV--HEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~ 358 (433)
+||.|+|.+++.++++ +.+..+....+..++.+.++.+..++++.....+ +-.+-.|+++.+...+.|++
T Consensus 252 LPG~R~GIiIane~vi--------qaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~ 323 (417)
T COG3977 252 LPGSRCGIIIANEKVI--------QAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRR 323 (417)
T ss_pred CCCcceeEEEccHHHH--------HHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 8999999999999886 6677666666666788899999999997665322 33445777777777777766
Q ss_pred c----CCeeecCCCccEEEEECC--CCChHHHHHHHHHcCCeEecCCCCCCC-------CCCCeEEEeeccChhHHHHHH
Q 045431 359 L----GFKVYGGKNAPYVWVQFP--GRSSWDVFSEILEKTHVVTTPGSGFGP-------GGEGFIRVSAFGHRGNVLEAC 425 (433)
Q Consensus 359 ~----g~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~-------~~~~~iRi~~~~~~~~l~~~l 425 (433)
. -+.+..|+++.|+|+=+. +....++.++|- +.||.+.||+.|-+ +...++|+++..++++++.++
T Consensus 324 ~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LK-a~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gv 402 (417)
T COG3977 324 YLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLK-ARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGV 402 (417)
T ss_pred hcCccceeeecCCcceeehhhhccCCCCHHHHHHHHH-hCeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHH
Confidence 4 466788999999888776 567788887764 55999999999853 345789999989999999999
Q ss_pred HHHHHhh
Q 045431 426 KRFKHLY 432 (433)
Q Consensus 426 ~~l~~~l 432 (433)
.+|.+.+
T Consensus 403 a~lae~v 409 (417)
T COG3977 403 AILAEEV 409 (417)
T ss_pred HHHHHHH
Confidence 9998764
No 109
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=5e-32 Score=255.12 Aligned_cols=307 Identities=15% Similarity=0.128 Sum_probs=226.9
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEE
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMA 153 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl 153 (433)
+...+.+.++..+++..++ +...-..+|++.+|+|+ +++++++++++|+.+++.. +.+++++||.|+
T Consensus 32 l~~~~~~~~~~~~~~~~~~--------g~~~~~~~Le~~lA~~~----g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl 99 (346)
T TIGR03576 32 LAGGFKIDEEDLELLETYV--------GPAIFEEKVQELGREHL----GGPEEKILVFNRTSSAILATILALEPPGRKVV 99 (346)
T ss_pred CCCChhHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHHc----CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence 4567888888888886542 12234456666666665 8889999999999999987 688889999998
Q ss_pred Ee---CCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHH
Q 045431 154 VQ---DPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRL 230 (433)
Q Consensus 154 ~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i 230 (433)
++ .|+|+.+...++..|. +++.+. +.+ . ++..+++++|++ ++++|+|.+++.+++++|
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga------------~~~~~~-~l~-~----l~~~~~~~lIii-tg~s~~G~v~~~~~L~~i 160 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGA------------EYFESD-ELS-E----LKKIDGTSLVVI-TGSTMDLKVVSEEDLKRV 160 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCC------------EEeccC-CHH-H----HhhCcCceEEEE-ECCCCCCcccCHHHHHHH
Confidence 74 5799999888888884 332211 111 1 222345777777 457999999999999999
Q ss_pred HHHHHHcCCEEEEeccccccccCC-CCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHH
Q 045431 231 VQFAKDNGSIIVYDSAYALYISDD-NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNR 309 (433)
Q Consensus 231 ~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 309 (433)
+++|++||+++|+||+|+.+.... ...+.... + . .++++|||| +++|+|+||++++++++ +.+..
T Consensus 161 ~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~-~-~--divv~s~SK--alaG~r~G~v~~~~~li--------~~l~~ 226 (346)
T TIGR03576 161 IKQAKSKEAIVLVDDASGARVRRLYGQPPALDL-G-A--DLVVTSTDK--LMDGPRGGLLAGRKELV--------DKIKS 226 (346)
T ss_pred HHHHHHcCCEEEEECCccccccccCCCCCHHHc-C-C--cEEEeccch--hccccceEEEEeCHHHH--------HHHHH
Confidence 999999999999999999754321 11122222 1 1 267889999 46899999999999885 66665
Q ss_pred HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChHHHHHHHH
Q 045431 310 IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEIL 389 (433)
Q Consensus 310 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~ 389 (433)
.......+.+++.|.++.++|+... .+.+++.++++++.+.+.+++ +.+.++ .++|+|+++++.++.++...++
T Consensus 227 ~~~~~~~s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~-~~~f~~~~~~~~~~~~~~~~ll 300 (346)
T TIGR03576 227 VGEQFGLEAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT-PTGFVIKGVEEEKLIEIGLDLL 300 (346)
T ss_pred hhcCcccCccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC-CCeEEEEeCCCCCHHHHHHHHH
Confidence 5544333468889999999987432 256678888999888888874 444443 4558999997544567788888
Q ss_pred HcCCeEecCCCCCCCCCCCeEEEeeccChh---HHHHHHHHHHHhhC
Q 045431 390 EKTHVVTTPGSGFGPGGEGFIRVSAFGHRG---NVLEACKRFKHLYK 433 (433)
Q Consensus 390 ~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~---~l~~~l~~l~~~l~ 433 (433)
+++||.++||..|. ..++++||+++.+++ +++.+++.|++.++
T Consensus 301 ~~~gV~v~~~~~f~-~~~~~vRis~~~~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 301 RNYGIITITAVGMP-GASKTLRFDLAAKDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred HhCCEEEeCCcccC-CCCCeEEEEEecChHHhcCHHHHHHHHHhccC
Confidence 88999999998883 346799999987665 89999999988764
No 110
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=6.4e-32 Score=259.05 Aligned_cols=331 Identities=15% Similarity=0.149 Sum_probs=230.2
Q ss_pred CCCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCCCCCC----CCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 61 PDAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSGYGAE----QGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~----~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
++.++|||+.|+| +.+.|+.+.+++.+++.++.. ....|... ....++++++++++ + .+++|++++|+
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~----~-~~~~i~~~~G~ 86 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGA--GSTASRLVSGNSPLHEELEEELAEWK----G-TEAALLFSSGY 86 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHHHhcCC--CCCCcCcccCCcHHHHHHHHHHHHHh----C-CCCEEEECchH
Confidence 4567999999965 345678999999998876432 22222222 23456888888876 4 36789999997
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC--CCccEEEEcC
Q 045431 136 KCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV--ARTDIIFFCS 213 (433)
Q Consensus 136 ~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~ 213 (433)
++.+.++..++++||.|++++|+|+.+...++..|. +++.++..+...+...+... .+++++++.+
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~------------~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~ 154 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLIDGCRLSGA------------RVRRYRHNDVEHLERLLEKNRGERRKLIVTDG 154 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCC------------ceEEecCCCHHHHHHHHHHcccCCCeEEEEeC
Confidence 777766777789999999999999999888888773 55555532111111111111 2467777778
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc---ccCCCCcceEEEecccccccccccceeeee
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF---EIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~---~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
++||||...+ +++|.++|+++|++||+||+|+.+.++....+.. .++. .+++|+++||||++|++| ||++
T Consensus 155 ~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~g---G~~~ 227 (360)
T TIGR00858 155 VFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKP-EPVDIQVGTLSKALGSYG---AYVA 227 (360)
T ss_pred CccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCc-cCCcEEEEechhhhhccC---cEEE
Confidence 8999998877 7889999999999999999998655443222222 2221 357899999999998766 9999
Q ss_pred ccccccccCCcchhHHHHHHHhh-c-cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCC
Q 045431 291 IPKELLFSDGFPVAKDFNRIVCT-C-FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKN 368 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 368 (433)
++++++ +.+...... . ..+.+...+.++.++++.. .+.++++++++++++.+.+.|+++++.+.+ ..
T Consensus 228 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~ 296 (360)
T TIGR00858 228 GSQALI--------DYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEALGFTLMP-SC 296 (360)
T ss_pred cCHHHH--------HHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHcCCccCC-CC
Confidence 988774 444332211 1 2224445455555656421 123567889999999999999998877664 47
Q ss_pred ccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCC-CCCCeEEEeec--cChhHHHHHHHHHH
Q 045431 369 APYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGP-GGEGFIRVSAF--GHRGNVLEACKRFK 429 (433)
Q Consensus 369 g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iRi~~~--~~~~~l~~~l~~l~ 429 (433)
++++|+.++. .+..++...+++ +||.+.++..+.. .+.+++|+++. .+++++++++++|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 297 TPIVPVIIGDNASALALAEELQQ-QGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 8899999874 234566666654 5999998766542 34568999974 58999999999874
No 111
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.9e-31 Score=257.86 Aligned_cols=336 Identities=18% Similarity=0.165 Sum_probs=229.3
Q ss_pred CCCceEEecCCC-CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 61 PDAEVISLGIGD-TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 61 ~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
++.++|+|+.|+ ++++.++.+.+++.+.+.... .....|....|.+++++++++++.+.++.+ ++|++|+| ++++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~--~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~ 115 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHG--FGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDAN 115 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcC--CCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHH
Confidence 567899999998 578889999999999887532 222334345688999999988888755654 78999999 4555
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC----CCCccEEEEcCC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST----VARTDIIFFCSP 214 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~p 214 (433)
.. +..++++||.|++++|+|+.+...+...+. +++.++..+...+...+.. ..++++|+..+.
T Consensus 116 ~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~------------~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v 183 (397)
T PRK06939 116 GGLFETLLGKEDAIISDALNHASIIDGVRLCKA------------KRYRYANNDMADLEAQLKEAKEAGARHKLIATDGV 183 (397)
T ss_pred HHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCC------------ceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecC
Confidence 54 677889999999999999999888888874 4555544211111111111 125666665567
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC--CCC-CcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD--DNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~--~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
+||||...+ +++|.++|++|+++||+||+|+..... +.+ .+...+. ++.+++++||||+++ |+|+||+++
T Consensus 184 ~~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~--g~r~G~v~~ 256 (397)
T PRK06939 184 FSMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM--DRVDIITGTLGKALG--GASGGYTAG 256 (397)
T ss_pred cCCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC--CCCcEEEEECHHHhC--ccCceEEEe
Confidence 899998544 899999999999999999999632222 111 1111221 234699999999994 569999999
Q ss_pred cccccccCCcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCc
Q 045431 292 PKELLFSDGFPVAKDFNRIVCT--CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNA 369 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g 369 (433)
+++++ +.+...... .....+...+.++.++++.. ...++++++++++++.+.+.|+++++.+..+.+
T Consensus 257 ~~~~~--------~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~- 325 (397)
T PRK06939 257 RKEVI--------DWLRQRSRPYLFSNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAAGFTLGPGEH- 325 (397)
T ss_pred CHHHH--------HHHHHhCccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-
Confidence 98875 444432211 11112333445444444321 112567889999999999999988887665544
Q ss_pred cEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCC--CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 370 PYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFG--PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 370 ~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~--~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.++++.++. .++.++...++++ ||.+.++. |. +.+.+++|+++ +.+++++++++++|++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 326 PIIPVMLGDAKLAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred CEEEEEECCHHHHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 444455542 3456777777776 99998644 43 22356899986 468999999999999875
No 112
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=4.9e-31 Score=258.76 Aligned_cols=339 Identities=13% Similarity=0.135 Sum_probs=249.2
Q ss_pred CCCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCC--CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHH
Q 045431 61 PDAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEG--YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~ 137 (433)
++.++|||+.+++ ++..++.+.+++.+++.+++.... ...|++..+..+|+++||+++ + .++.|++++|.+.
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~-~~~~i~~s~G~~a 181 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----G-TPDSILYSYGLST 181 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----C-CCCEEEECCHHHH
Confidence 4567999998865 677899999999999988653111 125777888999999999998 5 4578999999886
Q ss_pred HHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-------CCCc-cEE
Q 045431 138 DISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-------VART-DII 209 (433)
Q Consensus 138 al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~i 209 (433)
...++.+++++||.|+++...|..+...+...+ .+++.++.++..++...+++ .+++ ++|
T Consensus 182 ~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~I 249 (481)
T PLN02822 182 IFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSR------------STIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYI 249 (481)
T ss_pred HHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcC------------CeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEE
Confidence 555678899999999999888888877777776 36777777654444333321 1234 577
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC--CcceEEEeccccccccccccee
Q 045431 210 FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA--KEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 210 ~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~vi~i~S~sK~~~~~G~r~G 287 (433)
++..++|+||.+.+ +++|.++|++||+++|+||+|+...++.....+.+..+. .+..++++||||.+|++| |
T Consensus 250 vve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G 323 (481)
T PLN02822 250 VVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---G 323 (481)
T ss_pred EEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---e
Confidence 77688999999999 799999999999999999999965554322222222111 244588999999999888 9
Q ss_pred eeeccccccccCCcchhHHHHHHHhhccCCC--cHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeee
Q 045431 288 WTVIPKELLFSDGFPVAKDFNRIVCTCFNGA--SNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVY 364 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~ 364 (433)
|++++++++ +.+.........+. ++..+.++.++|+.. +...+++++++++++++.+.|++. |+.+.
T Consensus 324 ~i~g~~~ii--------~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 393 (481)
T PLN02822 324 FCTGSARVV--------DHQRLSSSGYVFSASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLSIG 393 (481)
T ss_pred EEEcCHHHH--------HHHHhcCCceeeccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 999998885 44443222222333 366777777777522 112567889999999999999987 88887
Q ss_pred cCCCccEEEEECCCC------C---hHHHHHHHHHcCCeEecCC--CCCCCC-CCCeEEEee--ccChhHHHHHHHHHHH
Q 045431 365 GGKNAPYVWVQFPGR------S---SWDVFSEILEKTHVVTTPG--SGFGPG-GEGFIRVSA--FGHRGNVLEACKRFKH 430 (433)
Q Consensus 365 ~~~~g~~~~~~~~~~------~---~~~~~~~l~~~~gi~v~~g--~~f~~~-~~~~iRi~~--~~~~~~l~~~l~~l~~ 430 (433)
.+.+++++++.+++. + ..++...+++++||.+.|+ ..|+.. .+.++|+++ ..++++|++++++|++
T Consensus 394 ~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 394 SNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred CCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 777899999999632 1 2467788886779999976 333221 245799985 3699999999999988
Q ss_pred hh
Q 045431 431 LY 432 (433)
Q Consensus 431 ~l 432 (433)
++
T Consensus 474 ~~ 475 (481)
T PLN02822 474 VA 475 (481)
T ss_pred HH
Confidence 75
No 113
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=9.4e-31 Score=253.09 Aligned_cols=339 Identities=15% Similarity=0.152 Sum_probs=236.2
Q ss_pred CCCCceEEecCCC-CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 60 YPDAEVISLGIGD-TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 60 ~~~~~~i~l~~g~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
.+++++|||+.++ +++++++.+.+++.+++.+.. .....|....|.+++++++++++.+..+. +++|++++|+++.
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~~a~ 106 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYG--VGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGFNTN 106 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcC--CCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHHHH
Confidence 4566899999987 577788999999999887542 23456777889999999999999875554 4679999997666
Q ss_pred HHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCCC
Q 045431 139 ISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNN 216 (433)
Q Consensus 139 l~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~n 216 (433)
+.++..++++||.|++++|+|+.+...+...|. ++..++..+...+...+.. .+++++|++++++|
T Consensus 107 ~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~ 174 (385)
T TIGR01825 107 QGVLSALLRKGDIVLSDELNHASIIDGLRLTKA------------TKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFS 174 (385)
T ss_pred HHHHHHhCCCCCEEEEEccccHHHHHHHHhcCC------------ceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCc
Confidence 655778899999999999999998877776663 3433331111111111111 13677777778899
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC-CcccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|||.+.+ +++|.++|++||+++|+||+|+.+.++... .....++-.++++++++||||++|++| ||+++++++
T Consensus 175 ~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~ 248 (385)
T TIGR01825 175 MDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKEL 248 (385)
T ss_pred CCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHH
Confidence 9999888 788999999999999999999876544211 111111112467899999999998666 999988877
Q ss_pred cccCCcchhHHHHHHHh-hc-cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 296 LFSDGFPVAKDFNRIVC-TC-FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+ +.+..... .. ....+++.+.++.++++.... ..+..++++++++++.+.|++.|+++..+. +.+++
T Consensus 249 ~--------~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~ 317 (385)
T TIGR01825 249 I--------EYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGGSE-TPITP 317 (385)
T ss_pred H--------HHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CCEEE
Confidence 4 44443221 11 122455667666666642111 134566778889999999998888877654 44666
Q ss_pred EECCC-CChHHHHHHHHHcCCeEecCCCCCC--CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 374 VQFPG-RSSWDVFSEILEKTHVVTTPGSGFG--PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 374 ~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~--~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+.++. .+..++...++++ ||.+. +..|. +.+..++|++. +.+++++++++++|++++
T Consensus 318 ~~~~~~~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 318 VVIGDEKAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred EEECCHHHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 66553 2345677777776 99985 44443 23457899985 579999999999999875
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=1.7e-30 Score=251.89 Aligned_cols=331 Identities=18% Similarity=0.170 Sum_probs=226.7
Q ss_pred CCCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCCCCCCC---CC----HHHHHHHHHHHhccCCCCCCcEEEc
Q 045431 61 PDAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSGYGAEQ---GE----KPLRAAIASTFYKDLGIEEGDIFVS 132 (433)
Q Consensus 61 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~---g~----~~lr~~la~~l~~~~~~~~~~i~~~ 132 (433)
++.++|+|+.+++ +++.++.+.+++.+++.+.+ .+|+++. |. .+|++++|+++ +. ++++++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~-----~~~~~s~~~~G~~~~~~~le~~ia~~~----g~--~~~ii~ 104 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHG-----FGMSSVRFICGTQDIHKELEAKIAAFL----GT--EDTILY 104 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhC-----CCCCCcCcccCChHHHHHHHHHHHHHh----CC--CcEEEE
Confidence 4568999999996 78889999999999987642 1333333 65 88999999997 54 467777
Q ss_pred CChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC----CCCcc
Q 045431 133 DGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST----VARTD 207 (433)
Q Consensus 133 ~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 207 (433)
+|+++++.. +..++++||.|++++|+|+++...++..+.. .+.++..+...+...+.. ..+++
T Consensus 105 ~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~------------~~~~~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 105 ASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAK------------RYRYANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred CchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCc------------eEEeCCCCHHHHHHHHHhhhhcCCCce
Confidence 888888886 5778899999999999999998888777742 222221111111111111 12677
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC-CCcceEEEecccccccccccce
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG-AKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+|++.+++||||.+.+ +++|+++|++||++||+||+|+.........+.....+ ..+.+++++|+||++ +|+|+
T Consensus 173 ~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~ 247 (393)
T TIGR01822 173 LIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASG 247 (393)
T ss_pred EEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCc
Confidence 8887788999999987 88999999999999999999963222211222211111 124569999999987 47899
Q ss_pred eeeeccccccccCCcchhHHHHHHH-hhccC-CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeee
Q 045431 287 GWTVIPKELLFSDGFPVAKDFNRIV-CTCFN-GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVY 364 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 364 (433)
||++++++++ +.+.... ..... +.+...+.++.++++.. +..++++++++++++++.+.|++.|+.+.
T Consensus 248 G~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 317 (393)
T TIGR01822 248 GFTTARKEVV--------ELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIK 317 (393)
T ss_pred EEEEeCHHHH--------HHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999998875 4444321 11112 23344444555555421 22467788999999999999998888765
Q ss_pred cCCCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCC--CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 365 GGKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFG--PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 365 ~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~--~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
++ .+.++++.+++ ....++...|+++ ||.+. +..|. +.+...+|+++ +.+++++++++++|++++
T Consensus 318 ~~-~~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 318 PA-DHPIIPVMLYDAVLAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred CC-CCCEEEEEeCCHHHHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 44 34556666553 3456677777665 99997 55553 22345799885 568999999999998874
No 115
>PLN02483 serine palmitoyltransferase
Probab=99.98 E-value=4.6e-30 Score=252.44 Aligned_cols=336 Identities=16% Similarity=0.200 Sum_probs=233.5
Q ss_pred CCceEEecCCCC-CCC-ChHHHHHHHHHHHhhcccC--CCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHH
Q 045431 62 DAEVISLGIGDT-TEP-IPEVITSALAKRSYALSTQ--EGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKC 137 (433)
Q Consensus 62 ~~~~i~l~~g~~-~~~-~~~~~~~a~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~ 137 (433)
...+++|++.++ .+. .++...+++.+++.+++.. .....|+...+..+|++++|+++ + .++.|++++|...
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~----g-~~~ai~~~~G~~a 173 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV----G-KPAAIVFGMGYAT 173 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh----C-CCcEEEECCHHHH
Confidence 456899988876 344 2455556666666665432 23335888889999999999998 5 4678999998777
Q ss_pred HHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCC-----cc
Q 045431 138 DISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VAR-----TD 207 (433)
Q Consensus 138 al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~ 207 (433)
.+.++..++++||.|++++|+|+++...++..| .+++.++.++..++...+++ .++ .+
T Consensus 174 n~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~G------------a~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k 241 (489)
T PLN02483 174 NSTIIPALIGKGGLIISDSLNHNSIVNGARGSG------------ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
T ss_pred HHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcC------------CeEEEEeCCCHHHHHHHHHhhhhccccccccCCce
Confidence 776678889999999999999999999988888 47777776532222111111 122 25
Q ss_pred EEEEcCC-CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC---CcccccCCCCcceEEEecccccccccc
Q 045431 208 IIFFCSP-NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP---RSIFEIPGAKEVAIETSSFSKYAGFTG 283 (433)
Q Consensus 208 ~i~l~~p-~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~---~~~~~~~~~~~~vi~i~S~sK~~~~~G 283 (433)
+++++++ .|++|...+ +++|+++|++||++||+||+|+....+... .++..++ ..+.+|+++||||++|++|
T Consensus 242 ~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~-~~~~dI~~~SfSKs~g~~G 317 (489)
T PLN02483 242 IIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVD-PADVDIMMGTFTKSFGSCG 317 (489)
T ss_pred EEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCC-cccCcEEEEecchhcccCc
Confidence 6666655 689998876 899999999999999999999843322111 2222222 1356799999999998777
Q ss_pred cceeeeeccccccccCCcchhHHHHHHHhh---ccCCCcHHHHHHHHHhc---C-cCChhHHHHHHHHHHHHHHHHHHHH
Q 045431 284 VRLGWTVIPKELLFSDGFPVAKDFNRIVCT---CFNGASNISQAGGLACL---S-PEGFKAVHEVIGFYKENTDIIVETF 356 (433)
Q Consensus 284 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~~l---~-~~~~~~~~~~~~~~~~~~~~l~~~l 356 (433)
||++++++++ +.+...... .....+...|. +.+.+ . ..+.....+++++++++++++.+.|
T Consensus 318 ---G~i~~~~~li--------~~l~~~~~~~~~~~~~~p~~~~~-~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L 385 (489)
T PLN02483 318 ---GYIAGSKELI--------QYLKRTCPAHLYATSMSPPAVQQ-VISAIKVILGEDGTNRGAQKLAQIRENSNFFRSEL 385 (489)
T ss_pred ---eEEEcCHHHH--------HHHHHhCccccccCCcCHHHHHH-HHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHH
Confidence 9999998885 555543221 11222333433 34444 2 2222334556789999999999999
Q ss_pred hhcCCeeecCCCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCC--CCCCCeEEEeec--cChhHHHHHHHHHHHh
Q 045431 357 NSLGFKVYGGKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFG--PGGEGFIRVSAF--GHRGNVLEACKRFKHL 431 (433)
Q Consensus 357 ~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~--~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 431 (433)
+++|+.+.++.+++.+|+.+.. ....++...++++ ||.+.| ..|. +...+.+||++. .+++++++++++|+++
T Consensus 386 ~~~G~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~-GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~ 463 (489)
T PLN02483 386 QKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQ-NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEV 463 (489)
T ss_pred HHCCCcccCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 9999887766677788777642 2344677777665 999997 4442 334578999864 5899999999999887
Q ss_pred h
Q 045431 432 Y 432 (433)
Q Consensus 432 l 432 (433)
+
T Consensus 464 ~ 464 (489)
T PLN02483 464 G 464 (489)
T ss_pred H
Confidence 4
No 116
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.98 E-value=7.7e-30 Score=246.88 Aligned_cols=338 Identities=13% Similarity=0.119 Sum_probs=223.5
Q ss_pred CCCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 61 PDAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 61 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
++..+|||+.+++ ++.+++.+.+++.+++.++.. ....|....|..++++.+++.+.+.++ .++.|++++|+.+.+
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~~-~~~~i~~~~g~~~~~ 113 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGA--GSGGSRLVTGNSPAHEALEEELAEWFG-AERALLFSSGYAANL 113 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCC--CCCCcCcccCCcHHHHHHHHHHHHHhC-CCcEEEECcHHHHHH
Confidence 5678999999875 345678999999999876431 122232333444444444444433235 356677777666555
Q ss_pred HHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCC-CccEEEEcCCCCcc
Q 045431 140 SRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVA-RTDIIFFCSPNNPT 218 (433)
Q Consensus 140 ~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~p~nPt 218 (433)
.++..++++||.|++++|+|+.+...+...|. +++.++..+...+...+.... ++.++++.+++|||
T Consensus 114 ~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~------------~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~ 181 (385)
T PRK05958 114 AVLTALAGKGDLIVSDKLNHASLIDGARLSRA------------RVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMD 181 (385)
T ss_pred HHHHHhCCCCCEEEEeCccCHHHHHHHHhcCC------------ceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCC
Confidence 55677889999999999999999888877773 555665432111111111111 24444444779999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC--CC-CCcccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 219 GAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD--DN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 219 G~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~--~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|...+ +++|.++|++||+++|+||+|+.+.++ +. ......++. .+++++++|+||++|++| ||+++++++
T Consensus 182 G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G---g~~~~~~~~ 254 (385)
T PRK05958 182 GDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAG-EPDVILVGTLGKALGSSG---AAVLGSETL 254 (385)
T ss_pred CCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCC-CCceEEEEechhhcccCC---cEEEcCHHH
Confidence 98766 889999999999999999999764443 21 111112332 356799999999998766 999988776
Q ss_pred cccCCcchhHHHHHHH-hh-ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 296 LFSDGFPVAKDFNRIV-CT-CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~-~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+ +.+.... .. ...+.+++.+.++.++++.... . +.+.+++.++++.+.+.|++.++++..+ .+.++|
T Consensus 255 ~--------~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~ 323 (385)
T PRK05958 255 I--------DYLINRARPFIFTTALPPAQAAAARAALRILRR-E-PERRERLAALIARLRAGLRALGFQLMDS-QSAIQP 323 (385)
T ss_pred H--------HHHHHhCccceecCCCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEE
Confidence 4 4443221 11 1223445555555555542211 1 4667889999999999999888877654 667888
Q ss_pred EECCC-CChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEeec--cChhHHHHHHHHHHHhh
Q 045431 374 VQFPG-RSSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSAF--GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 374 ~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~~--~~~~~l~~~l~~l~~~l 432 (433)
+.++. .++.++...+.+ +||.+.++..+. +.+++++|+++. .+++++++++++|++++
T Consensus 324 ~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 324 LIVGDNERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EEeCCHHHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 88874 344567777654 599998865432 234578999974 58999999999998864
No 117
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=5.7e-30 Score=249.04 Aligned_cols=336 Identities=13% Similarity=0.121 Sum_probs=227.9
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCC--CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGY--SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
.++++|+.+++ ++..++.+.+++.+++.++....+. ..|+......+|++.+|+++ +. ++.|++++|+++..
T Consensus 46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g~-~~~i~~~sG~~a~~ 120 (410)
T PRK13392 46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----GK-ESALLFTSGYVSND 120 (410)
T ss_pred ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----CC-CCEEEECcHHHHHH
Confidence 46888888765 6778999999999998775421111 12333334678999999987 63 57899999875444
Q ss_pred HHHHHhc--CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCC
Q 045431 140 SRLQIVF--GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPN 215 (433)
Q Consensus 140 ~~l~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~ 215 (433)
.++..+. .+||.|+++.+.|..+...++..|. ++..++.++...+...++. .+++++|++++|+
T Consensus 121 ~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~ 188 (410)
T PRK13392 121 AALSTLGKLLPGCVILSDALNHASMIEGIRRSGA------------EKQVFRHNDLADLEEQLASVDPDRPKLIAFESVY 188 (410)
T ss_pred HHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCC------------eEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCC
Confidence 4455454 4899888888888887777776663 4444443211111111221 2478899999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcc-eEEEecccccccccccceeeeecccc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEV-AIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
||||.+++ +++|.++|++|++++|+||+|+...++.....+....+..++ .++++||||.+|++| ||++++++
T Consensus 189 n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~ 262 (410)
T PRK13392 189 SMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASAD 262 (410)
T ss_pred CCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHH
Confidence 99999998 888888999999999999999943333222222222111122 388999999999888 99998887
Q ss_pred ccccCCcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 295 LLFSDGFPVAKDFNRIVCT--CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++ +.+.+.... .....+++.+.++.++|+... .....+++++++++++.+.|++.|+.+.++ .+.++
T Consensus 263 ~~--------~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~ 331 (410)
T PRK13392 263 LI--------DFVRSFAPGFIFTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNANGIPVMPS-PSHIV 331 (410)
T ss_pred HH--------HHHHHhCcchhccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEE
Confidence 75 444443321 123345577877777776322 223456788999999999999989887654 45555
Q ss_pred EEECCCC-ChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 373 WVQFPGR-SSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+.++.. ...++.+.|++++||.+.++.... +.+..++|+++ ..++++++.+++.|++++
T Consensus 332 ~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 332 PVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred EEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 5555421 234667777766799999865332 23457899996 568999999999998864
No 118
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=5.3e-30 Score=242.80 Aligned_cols=312 Identities=16% Similarity=0.169 Sum_probs=211.9
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQ 143 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~ 143 (433)
+|||+++.++. +++.+++++.+.. .....|++..+..+|++++++++ ++++. ++++|+++++.+ +.
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~------~~~~~Y~~~~~~~~L~~~la~~~----g~~~~--~v~~~g~~a~~~~l~ 67 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAP------VGDDVYGDDPTVNALQDYAAELS----GKEAA--LFLPTGTQANLVALL 67 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhcc------CCCcccCCCHHHHHHHHHHHHHh----CCCeE--EEeCchHHHHHHHHH
Confidence 48899999877 7788888887643 33457878889999999999997 66543 466666655554 66
Q ss_pred HhcCCCCEEEEeCCCChh-hhhh-HHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CC------CccEEE
Q 045431 144 IVFGSNVTMAVQDPSYPA-YVDS-SVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VA------RTDIIF 210 (433)
Q Consensus 144 ~l~~~gd~Vl~~~p~~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~------~~~~i~ 210 (433)
.++.+||+|+++.|+|.. +... ....+. ..++.++.+.+ +..+++ + .+ ++++|+
T Consensus 68 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~lv~ 134 (333)
T PRK10534 68 SHCERGEEYIVGQAAHNYLYEAGGAAVLGS-----------IQPQPIDAAAD--GTLPLDKVAAKIKPDDIHFARTRLLS 134 (333)
T ss_pred HhcCCCCeeEEechhhhhHhcCCchHHhcC-----------ceEEeecCCCC--CCCCHHHHHHhhcccCcCcccceEEE
Confidence 778999999999888853 3221 233331 24555655432 333322 1 12 578999
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee-ee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG-WT 289 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G-~l 289 (433)
++||+ ||.+++.+++++|+++|++|+++||+||+|..........+...+....++++ .||||.+|++ +| |+
T Consensus 135 l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~ 207 (333)
T PRK10534 135 LENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLL 207 (333)
T ss_pred EecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceE
Confidence 99766 59999999999999999999999999999873221100112222222223333 4899988754 68 68
Q ss_pred eccccccccCCcchhHHHHHHHhhccCC--CcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCC
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNG--ASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK 367 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 367 (433)
+++++++ +.+..+....... .+.+.|.++.+.+++. ....++..++++++.+.|+++|+.+.++
T Consensus 208 ~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~-----~~~~~~~~~~r~~l~~~L~~~g~~~~~~- 273 (333)
T PRK10534 208 VGNRDYI--------KRARRWRKMTGGGMRQAGILAAAGLYALKHN-----VARLQEDHDNAAWLAEQLREAGADVMRQ- 273 (333)
T ss_pred EcCHHHH--------HHHHHHHHHhCCchhhHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHhCCCccCCC-
Confidence 8888885 6666555433211 2345676666666421 2233344556789999999999988766
Q ss_pred CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.++|+|+++++....++ .++++++||.++|+. ++|++. ..+.+++++++++|++++
T Consensus 274 ~~nfv~~~~~~~~~~~~-~~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 274 DTNMLFVRVGEEQAAAL-GEYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred CceEEEEECCchhHHHH-HHHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 79999999974334444 456667799998862 478885 358999999999999875
No 119
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=2.7e-29 Score=243.68 Aligned_cols=336 Identities=18% Similarity=0.167 Sum_probs=227.7
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCC----CCCCCHHHHHHHHHHHhccCCC-CCCcEEEcCChHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYG----AEQGEKPLRAAIASTFYKDLGI-EEGDIFVSDGAKCD 138 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~la~~l~~~~~~-~~~~i~~~~G~~~a 138 (433)
+.|.|..+... +.|+.+.+++.+.+...........|. ......++|+.+++++ ++ ++++|++|+|++++
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~i~~t~g~t~~ 90 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAPDAENIVWTRGTTES 90 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCChHHH
Confidence 47888888765 578889999988875432111111110 0123567889999987 77 47899999999999
Q ss_pred HHHH-HHh----cCCCCEEEEeCCCChhh----hhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCc
Q 045431 139 ISRL-QIV----FGSNVTMAVQDPSYPAY----VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VART 206 (433)
Q Consensus 139 l~~l-~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 206 (433)
++++ .++ +++||+|++++|+|++. ....+..| .+++.++.+.+.....+ +++ .+++
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~i~~~t 158 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTG------------AKVVKLPIGADLLPDIRQLPELLTPRT 158 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcC------------cEEEEEecCCCCCcCHHHHHHHhccCc
Confidence 9974 555 48999999999999763 33345556 47888887654322221 222 3678
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccce
Q 045431 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 207 ~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+++++++|+||||.+++ +++|.++|+++|+++|+|++|+.... +..+... +..+++.|++|.+|.+| +
T Consensus 159 ~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~gp~G--~ 226 (398)
T TIGR03392 159 RILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG---PPDVQAL----DIDFYAFSGHKLYGPTG--I 226 (398)
T ss_pred eEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CCChhhc----CCCEEEEecccccCCCc--e
Confidence 99999999999999988 67899999999999999999974322 2223222 22378889999988555 8
Q ss_pred eeeeccccccccCCcchh----------------HHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHH
Q 045431 287 GWTVIPKELLFSDGFPVA----------------KDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 350 (433)
||++++++++..-.+-.. +.-.++...+.+..+..+..++++++.+.+ +++..++.++.++
T Consensus 227 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g---~~~i~~~~~~l~~ 303 (398)
T TIGR03392 227 GVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDID---IAAAEAWSVSLAD 303 (398)
T ss_pred EEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhC---HHHHHHHHHHHHH
Confidence 999998887522110000 000111111111122334444444444333 3567788888889
Q ss_pred HHHHHHhhc-CCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEee--ccChhHH
Q 045431 351 IIVETFNSL-GFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSA--FGHRGNV 421 (433)
Q Consensus 351 ~l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~--~~~~~~l 421 (433)
.+.+.|+++ |+.+..+..+.++++.+++....++...| +++||.+++|..|.. ..++++|+|+ +++++|+
T Consensus 304 ~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 304 LAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999999887 78776555566777788766666777665 456999999986642 1247899995 6799999
Q ss_pred HHHHHHHHHhh
Q 045431 422 LEACKRFKHLY 432 (433)
Q Consensus 422 ~~~l~~l~~~l 432 (433)
+.+++.|++++
T Consensus 383 ~~l~~~l~~~~ 393 (398)
T TIGR03392 383 DALVDAVGAAL 393 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 120
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=4.8e-29 Score=242.17 Aligned_cols=336 Identities=17% Similarity=0.168 Sum_probs=227.3
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCC----CCCCCCHHHHHHHHHHHhccCCC-CCCcEEEcCChHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGY----GAEQGEKPLRAAIASTFYKDLGI-EEGDIFVSDGAKCD 138 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y----~~~~g~~~lr~~la~~l~~~~~~-~~~~i~~~~G~~~a 138 (433)
+.+.|..+... +.|+.+.+++.+.+...........+ .......++|+.+++++ ++ ++++|++|+|++++
T Consensus 19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~i~~~~~~t~~ 93 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL----NAPDAKNIVWTRGTTES 93 (401)
T ss_pred ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEECCHHHH
Confidence 46888887765 57788999998888643210111111 00223667888888887 77 78999999999999
Q ss_pred HHHH-HHh----cCCCCEEEEeCCCChhh----hhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCc
Q 045431 139 ISRL-QIV----FGSNVTMAVQDPSYPAY----VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VART 206 (433)
Q Consensus 139 l~~l-~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 206 (433)
++++ ..+ +++||+|++.+|+|++. ....+..| .+++.++.+.+..++.+ +++ .+++
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~d~~~l~~~i~~~t 161 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTG------------AKVVKLPLGADRLPDVDLLPELITPRT 161 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhC------------CEEEEEecCCCCcCCHHHHHHhcCcCc
Confidence 9974 555 47999999999999764 33334456 47788887643222211 222 3688
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccce
Q 045431 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 207 ~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+++++++|+||||.+++ +++|+++|+++|+++|+|++|+.... +..+... +..+++.|++|.+|.+| +
T Consensus 162 ~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~~gp~G--~ 229 (401)
T PRK10874 162 RILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF---PADVQAL----DIDFYAFSGHKLYGPTG--I 229 (401)
T ss_pred EEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc---cCCchhc----CCCEEEEecccccCCCc--c
Confidence 99999999999999998 67889999999999999999974222 2223222 23488899999988666 6
Q ss_pred eeeeccccccccCCcch----------------hHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHH
Q 045431 287 GWTVIPKELLFSDGFPV----------------AKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 350 (433)
||++++++.+..-.+.. .....++.. .+++.+.+.++.++++.......++..++.++.++
T Consensus 230 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~---Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~ 306 (401)
T PRK10874 230 GVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEA---GTPNVAGVIGLSAALEWLADIDINQAESWSRSLAT 306 (401)
T ss_pred EEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccC---CCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999888753211000 000011111 12343444444444431111223566778888889
Q ss_pred HHHHHHhhc-CCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEee--ccChhHH
Q 045431 351 IIVETFNSL-GFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSA--FGHRGNV 421 (433)
Q Consensus 351 ~l~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~--~~~~~~l 421 (433)
++.+.|+++ |+.+..+..+.++++.+++....++...| .++||.+.+|..|.. ...+++|+|+ +++++|+
T Consensus 307 ~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edi 385 (401)
T PRK10874 307 LAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDV 385 (401)
T ss_pred HHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHH
Confidence 999999887 88877655666777788766666666555 556999999987642 1257899996 5699999
Q ss_pred HHHHHHHHHhh
Q 045431 422 LEACKRFKHLY 432 (433)
Q Consensus 422 ~~~l~~l~~~l 432 (433)
+.+++.|++++
T Consensus 386 d~ll~al~~~~ 396 (401)
T PRK10874 386 DALVNAVDRAL 396 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999998875
No 121
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=7.4e-29 Score=221.03 Aligned_cols=331 Identities=20% Similarity=0.285 Sum_probs=244.9
Q ss_pred ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHHHHHHhc--CCCCEE
Q 045431 77 IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDISRLQIVF--GSNVTM 152 (433)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~~l~~l~--~~gd~V 152 (433)
+|..+.+.....+...+ .+...|+.++|.+-+|+.+|+|+.+ |+.++|++|++|+|++.++..++.++ .+.+-|
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gv 164 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGV 164 (475)
T ss_pred CCHHHHHHHHHHHHhcC--CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCce
Confidence 67777777777776654 3566899999999999999999985 77789999999999999999865554 567889
Q ss_pred EEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC----------CCCccEEEEcCCCCccccCC
Q 045431 153 AVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST----------VARTDIIFFCSPNNPTGAAA 222 (433)
Q Consensus 153 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~i~l~~p~nPtG~~~ 222 (433)
+++-|.|+-|...+..+|. ..+.+.++.+.+|..+.+. .-+++++++.||.||||+++
T Consensus 165 liPiPQYPLYsAti~l~~~------------~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvl 232 (475)
T KOG0258|consen 165 LIPIPQYPLYSATISLLGG------------TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVL 232 (475)
T ss_pred EeecCCCchhHHHHHHhCC------------cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhh
Confidence 9999999999999999994 6777788888888877432 24789999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCccc----ccCC-CCcc--eEEEecccccc-cccccceeeeecc
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDD--NPRSIF----EIPG-AKEV--AIETSSFSKYA-GFTGVRLGWTVIP 292 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~--~~~~~~----~~~~-~~~~--vi~i~S~sK~~-~~~G~r~G~l~~~ 292 (433)
|.+.+++|+.+|.++++.++.||+|.+-.+.+ .+.+++ ++.. .+++ .+.+.|.||.+ |=.|.|-||+-.-
T Consensus 233 s~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~ 312 (475)
T KOG0258|consen 233 SEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESL 312 (475)
T ss_pred cHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecc
Confidence 99999999999999999999999999977764 344443 2221 1223 46678889965 2357888986432
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCc-----CCh----hHHHHHHHHHHHHHHHHHHHHhhc-CCe
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP-----EGF----KAVHEVIGFYKENTDIIVETFNSL-GFK 362 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-----~~~----~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 362 (433)
.-. +++.+.+.+.... .-.++...|...-....- ... ...+.....++++...+.+.++++ |+.
T Consensus 313 n~~-----prv~~qi~Kl~si-~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~ 386 (475)
T KOG0258|consen 313 NRD-----PRVKQQIKKLASI-KLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGIS 386 (475)
T ss_pred cCC-----hhHHHHHHHHHhh-hhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCcee
Confidence 111 1112333333222 233566677755555541 111 234666778889999999999998 999
Q ss_pred eecCCCccEEEEECC--C-----------CChHHHHHHHHHcCCeEecCCCCCCC-CCCCeEEEeeccChhHHHHHHHHH
Q 045431 363 VYGGKNAPYVWVQFP--G-----------RSSWDVFSEILEKTHVVTTPGSGFGP-GGEGFIRVSAFGHRGNVLEACKRF 428 (433)
Q Consensus 363 ~~~~~~g~~~~~~~~--~-----------~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iRi~~~~~~~~l~~~l~~l 428 (433)
..++++++|++-++. . ..+.-...+||+..||.+.||+.|+. .|.-|+|.++-... + +.++++
T Consensus 387 cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~ 463 (475)
T KOG0258|consen 387 CNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKF 463 (475)
T ss_pred eccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHH
Confidence 999999999987764 1 13344567889999999999999984 45678999964333 3 555555
Q ss_pred HH
Q 045431 429 KH 430 (433)
Q Consensus 429 ~~ 430 (433)
++
T Consensus 464 ~~ 465 (475)
T KOG0258|consen 464 KK 465 (475)
T ss_pred HH
Confidence 54
No 122
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.5e-29 Score=213.80 Aligned_cols=323 Identities=18% Similarity=0.286 Sum_probs=237.0
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
++.++.++..+.+.-++|+-.+ + -..| +..-...++.++++- -+.++|+|+++-|+.+.+++
T Consensus 40 G~~iv~ld~~e~~ryPdP~q~e-f------------k~~~-~d~rnk~ls~a~~~d----kpLt~dnic~GvGsDE~ID~ 101 (375)
T KOG0633|consen 40 GRDIVKLDANENPRYPDPEQME-F------------KYVY-PDPRNKRLSDALAQD----KPLTSDNICVGVGSDELIDL 101 (375)
T ss_pred CCCceEeccccCCCCcCHHHcc-c------------cccc-CCcccchhhhhcccC----CCCCccceEEecCcHHHHHH
Confidence 4468899888866444444321 0 1123 233456666666654 26789999999999999998
Q ss_pred -HHHhcCCC-CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-----CCCCCCccEEEEcCC
Q 045431 142 -LQIVFGSN-VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-----LSTVARTDIIFFCSP 214 (433)
Q Consensus 142 -l~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~l~~p 214 (433)
++..|.|| ++|+...|+|+.|.-.....+ +.++.+|.+++..+..+ ++....+|++++++|
T Consensus 102 iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd------------~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSP 169 (375)
T KOG0633|consen 102 IIRCVCDPGKEKILDCPPTYSMYVVDAAIND------------AEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSP 169 (375)
T ss_pred HHhheecCCccceeecCCcceeEEEEeecCC------------ceEEEecCCCCccccHHHHHHHHhccccceEEEEcCC
Confidence 57788999 899999999999876555555 47888888774333222 122358999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
+||||..++.+++++|++.=. +.++++||+|-+|...+..-++. ...+|++++.+|||+||++|+|+||...+..
T Consensus 170 gNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV---~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ 244 (375)
T KOG0633|consen 170 GNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVESRMKLV---KKYPNLIVLQTLSKSFGLAGIRVGYGAFPLS 244 (375)
T ss_pred CCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccccchHh---HhCCceeehhhhhhhcCcceeEeecccccHH
Confidence 999999999999999998533 79999999999987643322221 2246789999999999999999999999998
Q ss_pred ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CC-eeecCCCccEE
Q 045431 295 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GF-KVYGGKNAPYV 372 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~~~g~~~ 372 (433)
+. ..+.+.++.. ..|.+...+|++++.+...+.++..+..+-+.+.++...|.+. ++ ++.++..++|+
T Consensus 245 ia--------~iln~~KaPY--NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFi 314 (375)
T KOG0633|consen 245 IA--------EILNRAKAPY--NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFI 314 (375)
T ss_pred HH--------HHHHhccCCc--cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEE
Confidence 84 5566555433 3677888889999997666788999999999999999999987 43 34566788999
Q ss_pred EEECCCC---ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 373 WVQFPGR---SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 373 ~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
.+++.+. .+..+..+++.+.||.++--.. ...-.|++|++.+ ++|+-.-+++.|+++
T Consensus 315 Li~v~~~~n~~akkly~q~at~~gVvVRfrgs-e~~c~G~lRitvG-t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 315 LIEVTGGDNGMAKKLYKQDATKMGVVVRFRGS-EEGCKGYLRITVG-TPEENTVLMKCLKQF 374 (375)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhcceEEEEcCC-ccccceeEEEEcC-CcccchHHHHHHHhh
Confidence 9998732 3456777777788999963110 1223689999974 445555666666664
No 123
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=1e-28 Score=235.86 Aligned_cols=331 Identities=18% Similarity=0.163 Sum_probs=218.1
Q ss_pred ceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCCC----CCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 64 EVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSGY----GAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 64 ~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~Y----~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
++++|+.+++ ..+.++++.+++.+.+.++.+ ....| +......++++.+++++ +.+ +.|++++| +++
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~la~~~----~~~-~~iv~~sg-~~a 73 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGV--GAGGSRLISGTSDLHEELEEELAEFH----GKE-AALVFSSG-YAA 73 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCC--CCCCcCeecCCchHHHHHHHHHHHHh----CCC-CEEEeccH-HHH
Confidence 3677877775 455679999999999976432 22223 22334466677777665 553 45555555 556
Q ss_pred HHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC---CCccEEEEcCC
Q 045431 139 ISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV---ARTDIIFFCSP 214 (433)
Q Consensus 139 l~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~p 214 (433)
+.+ +..++++||.|++++|+|+++...++..|. +++.++..+...+...+... .+++++++++|
T Consensus 74 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~------------~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~ 141 (349)
T cd06454 74 NDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGA------------KKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGV 141 (349)
T ss_pred HHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHHhhccCCCeEEEEecc
Confidence 554 677789999999999999998887777773 55555432111111111111 35677777799
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccC-CCCcceEEEecccccccccccceeeeeccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIP-GAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
+||||+..+ +++|+++|+++|+++|+|++|+..........+..++ ...+.+++++|+||+++.+| ||+++++
T Consensus 142 ~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~ 215 (349)
T cd06454 142 YSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK 215 (349)
T ss_pred ccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH
Confidence 999999877 7888999999999999999997432221111111111 12356799999999998545 9999887
Q ss_pred cccccCCcchhHHHHHHHh-h-ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 294 ELLFSDGFPVAKDFNRIVC-T-CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
+++ +.+..... . .....+...+.++.+.++.... .+..+++++++++.+.+.|.++|+....+.++.+
T Consensus 216 ~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~ 285 (349)
T cd06454 216 ELI--------DYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSPSHII 285 (349)
T ss_pred HHH--------HHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcE
Confidence 764 33332211 1 1123455556556666542211 3567889999999999999988887766555555
Q ss_pred EEEECC-CCChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEeec--cChhHHHHHHHHHHHh
Q 045431 372 VWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSAF--GHRGNVLEACKRFKHL 431 (433)
Q Consensus 372 ~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 431 (433)
.++.++ +....++...++++ ||.+.++.... ..+.+++|+++. .+++++++++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 566554 34456777777766 99998863211 223578999974 5899999999999864
No 124
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=2.8e-28 Score=236.61 Aligned_cols=340 Identities=12% Similarity=0.126 Sum_probs=222.5
Q ss_pred HhcCCCCceEEecCCCCC--CCC-hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGDTT--EPI-PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~~~--~~~-~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....++...|||..|.+. +.. ++.+.+++.+++.... .....| ..+++.++++++.+..+ .+++++++
T Consensus 33 ~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~-----~~~~~~~la~~l~~~~~--~~~v~~~~ 103 (396)
T PRK02627 33 LWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI--HTSNLY-----YIEPQEELAEKLVELSG--MDKVFFCN 103 (396)
T ss_pred EEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc--cccccc-----CCHHHHHHHHHHHhhcC--CCEEEECC
Confidence 334567789999887653 333 5889999999886532 111123 36888888888876433 47999999
Q ss_pred ChHHHHHH-HHHhcCCC-------CEEEEeCCCChhhhhhHHHhCCcccccc-cccccceEEEeecCccCCcccCCCCCC
Q 045431 134 GAKCDISR-LQIVFGSN-------VTMAVQDPSYPAYVDSSVIMGQTGEFQK-DAEKYGKIEYMRCTAENGFFPDLSTVA 204 (433)
Q Consensus 134 G~~~al~~-l~~l~~~g-------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (433)
|+++++.+ +..+...+ ++|++.+++|.++.......+....+.. .......+..++.++...+...+ .+
T Consensus 104 gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i--~~ 181 (396)
T PRK02627 104 SGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAI--TD 181 (396)
T ss_pred CcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhc--CC
Confidence 99999997 44333222 7899999999887655554442111000 00000011222211111111111 25
Q ss_pred CccEEEEcCCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccc
Q 045431 205 RTDIIFFCSPNNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTG 283 (433)
Q Consensus 205 ~~~~i~l~~p~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G 283 (433)
++++|+++.++||+| .+++.+.+++|.++|++||++||+||+|.++.+.+.+.+.......++ +.||||.++ +|
T Consensus 182 ~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~~~-~G 256 (396)
T PRK02627 182 KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD----IMTLAKGLG-GG 256 (396)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC----EEEEcchhh-CC
Confidence 788888888899999 688999999999999999999999999998766554332222221223 347999998 99
Q ss_pred cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh----c
Q 045431 284 VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS----L 359 (433)
Q Consensus 284 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~ 359 (433)
+|+||++++++++ +.+.......+.+.+++.|.++.++++.... ++..++++++.+.+.+.|.+ +
T Consensus 257 ~rig~~~~~~~~~--------~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (396)
T PRK02627 257 VPIGAVLAKEKVA--------DVFTPGDHGSTFGGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKY 325 (396)
T ss_pred cccEEEEEcHHHH--------hccCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999998874 4443333445566899999999888863222 22233444444444444433 3
Q ss_pred C-CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 360 G-FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 360 g-~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+ +.... ..|.++|+.++ .+..++...++++ ||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 326 ~~~~~~~-~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 326 PGIKEVR-GLGLMIGIELD-RPAAEIVKKALEK-GLLINVTG------DNVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred CCeeeec-cCcEEEEEEec-CcHHHHHHHHHHC-CeEEeecC------CCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 2 22222 36788999984 3566777777766 99998863 36799984 568999999999998876
No 125
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.96 E-value=1.1e-27 Score=229.81 Aligned_cols=331 Identities=14% Similarity=0.122 Sum_probs=231.8
Q ss_pred CCCceEEecCCCC--CCCChH---HHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 61 PDAEVISLGIGDT--TEPIPE---VITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~--~~~~~~---~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
.+-+++.|..+++ |+..+. .+.++..+++.. +...|++..|.++|++++++++ +. +++++|+|+
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~-----gd~~Y~~~~g~~~Leeaia~~~----g~--~~vv~t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML-----GDEAYAGSKSFYDLEDAVQDLF----GF--KHIIPTHQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh-----CCCccCCCCCHHHHHHHHHHHH----CC--CeEEEcCCH
Confidence 4557899999998 776664 566666666652 3346999999999999999998 43 589999999
Q ss_pred HHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCC------cc--cCCCC----
Q 045431 136 KCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENG------FF--PDLST---- 202 (433)
Q Consensus 136 ~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~---- 202 (433)
++++.+ +..+++|||.| +++|.|..+...+...|. .++.++.+.+.+ +. .++++
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga------------~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~ 144 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGA------------VPVDLVIDEAHDAQELIPFKGNIDVAKLEKL 144 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCC------------EeEEEecccccccccccCCCCCcCHHHHHHH
Confidence 999987 57789999987 689999999888888994 677777754322 22 33221
Q ss_pred -C----CCccEEEEcCCCCcc-ccCCCHHHHHHHHHHHHHcCCEEEEecccccc--cc-----CC-CCCcccccCCCCcc
Q 045431 203 -V----ARTDIIFFCSPNNPT-GAAATREQLTRLVQFAKDNGSIIVYDSAYALY--IS-----DD-NPRSIFEIPGAKEV 268 (433)
Q Consensus 203 -~----~~~~~i~l~~p~nPt-G~~~~~~~~~~i~~~a~~~~~~li~De~~~~~--~~-----~~-~~~~~~~~~~~~~~ 268 (433)
. .++++|++++|+||+ |+++|.+++++|.++|++||++||+|+++... .+ ++ ...++.+ .
T Consensus 145 I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e------i 218 (431)
T cd00617 145 IDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE------I 218 (431)
T ss_pred hCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH------H
Confidence 1 247889999999998 99999999999999999999999999996521 11 11 1223322 2
Q ss_pred eEEEecccccccccccc------eeeeecccc-ccccCCcchhHHHHHHH----hhcc-CCCcHHHHHHHHHhcCcCChh
Q 045431 269 AIETSSFSKYAGFTGVR------LGWTVIPKE-LLFSDGFPVAKDFNRIV----CTCF-NGASNISQAGGLACLSPEGFK 336 (433)
Q Consensus 269 vi~i~S~sK~~~~~G~r------~G~l~~~~~-~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~q~~~~~~l~~~~~~ 336 (433)
++.++|++|.+.++|+| .||++++++ ++ +.++... .... .+.+.....++...|+....
T Consensus 219 ~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~--------~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~- 289 (431)
T cd00617 219 AREMFSYADGCTMSAKKDGLVNIGGFLALRDDELY--------EEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE- 289 (431)
T ss_pred HHHhhccCCEEEEEeecCCCCccceEEEeCcHHHH--------HHHHHhccccCCccccccccHHHHHHHHHHHHhccc-
Confidence 35567888888888887 569999875 53 4444321 1111 12222322333325542211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCC---------CChHHHHHHHHHcCCeEecC-CCCC---C
Q 045431 337 AVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPG---------RSSWDVFSEILEKTHVVTTP-GSGF---G 403 (433)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~---------~~~~~~~~~l~~~~gi~v~~-g~~f---~ 403 (433)
.+.+.+.++ +++++.+.|++.|+.+..|.+|+++|++++. .++.++..+|+++.||.+.- |... .
T Consensus 290 -~~~l~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~ 367 (431)
T cd00617 290 -EDYLRHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD 367 (431)
T ss_pred -HHHHHHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence 133333444 5589999999999999999999999999762 14778888999999999643 4421 1
Q ss_pred CC-------CCCeEEEee---ccChhHHHHHHHHHHHhh
Q 045431 404 PG-------GEGFIRVSA---FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 404 ~~-------~~~~iRi~~---~~~~~~l~~~l~~l~~~l 432 (433)
+. .-..+||++ .-+.++++...++|..++
T Consensus 368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~ 406 (431)
T cd00617 368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALY 406 (431)
T ss_pred CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHH
Confidence 11 136799996 338899999998888765
No 126
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=5.1e-28 Score=233.49 Aligned_cols=337 Identities=14% Similarity=0.133 Sum_probs=218.4
Q ss_pred cCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 59 KYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 59 ~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
..++...|||..|.. .+ +.++.+.+++.+++..... ....| +.....+|.+.+++++ +. +++++++|+
T Consensus 23 ~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~~~-~~~~~~~l~~~la~~~----g~--~~~~~~~sg 93 (379)
T TIGR00707 23 DVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVH--VSNLY-YTEPQEELAEKLVEHS----GA--DRVFFCNSG 93 (379)
T ss_pred eCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc--ccccc-CCHHHHHHHHHHHhhC----CC--CEEEEeCCc
Confidence 345678999988632 23 3558999999998876431 11234 3333455555555553 54 499999999
Q ss_pred HHHHHHHHHhc----C----CCCEEEEeCCCChhhhhhHHHhCCcccccccc-cccceEEEeecCccCCcccCCCC--CC
Q 045431 136 KCDISRLQIVF----G----SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDA-EKYGKIEYMRCTAENGFFPDLST--VA 204 (433)
Q Consensus 136 ~~al~~l~~l~----~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~ 204 (433)
++++.++..++ . +||+|++.+|+|+++.......+....+.... ....+...++.++ ..++++ .+
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~~~~ 169 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYND----IESLKKAIDD 169 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCC----HHHHHHHhhh
Confidence 99988643322 2 37999999999998876666665432210000 0000111222111 111111 24
Q ss_pred CccEEEEcCCCCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccc
Q 045431 205 RTDIIFFCSPNNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTG 283 (433)
Q Consensus 205 ~~~~i~l~~p~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G 283 (433)
++++|+++.++||+|.. ++.+++++|.++|++|++++|+||+|.++.+.+.+.+..... ..++++ ||||.++ +|
T Consensus 170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~-~~~d~~---t~sK~~~-~G 244 (379)
T TIGR00707 170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYG-IEPDII---TLAKGLG-GG 244 (379)
T ss_pred CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcC-CCCCEE---EEccccc-CC
Confidence 67888886556777764 799999999999999999999999999876654332222221 222333 7899998 99
Q ss_pred cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCee
Q 045431 284 VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKV 363 (433)
Q Consensus 284 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 363 (433)
+|+||++++++++ +.+.........+.++++|.++.++|+.... ....++++++++.+.+.|++.+...
T Consensus 245 ~riG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (379)
T TIGR00707 245 VPIGATLAKEEVA--------EAFTPGDHGSTFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNY 313 (379)
T ss_pred cccEEEEEcHHHH--------hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999998775 4444332334455788999999888762211 3455677777777777776642211
Q ss_pred ---ecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 364 ---YGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 ---~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
..+..|+++|+.++. +..++...+ .+.||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 314 ~~~~~~~~g~~~~~~~~~-~~~~~~~~l-~~~Gv~v~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 314 PNKEVRGKGLMLGIELEA-PCKDIVKKA-LEKGLLVNCAG------PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred CCCccccCceEEEEEecC-cHHHHHHHH-HHCCcEEeeCC------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 112368899999864 345566665 45699999852 47899995 468999999999998864
No 127
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=1.3e-27 Score=232.60 Aligned_cols=337 Identities=14% Similarity=0.132 Sum_probs=225.5
Q ss_pred CCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCC--CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 62 DAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEG--YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
+.++++|+++++ .+..+|.+.+++.+++.++....+ ...|++.....+|++.+|+++ + .++.+++++|+.+.
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~----g-~~~~~~~~sG~~an 119 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH----G-KEAALVFTSGYVSN 119 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh----C-CCcEEEECcHHHHH
Confidence 357899998876 577889999999999877542111 112334455677888888876 5 35678888887554
Q ss_pred HHHHHHhc--CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC--CCccEEEEcCC
Q 045431 139 ISRLQIVF--GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV--ARTDIIFFCSP 214 (433)
Q Consensus 139 l~~l~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~p 214 (433)
..++..++ .+++.|+.....|......+...+. ++..++..+...+..-++.. +++++|++++|
T Consensus 120 ~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~------------~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v 187 (407)
T PRK09064 120 DATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRC------------EKHIFRHNDVAHLEELLAAADPDRPKLIAFESV 187 (407)
T ss_pred HHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCC------------cEEEECCCCHHHHHHHHHhccCCCCeEEEEeCC
Confidence 54555444 3788777777777776666665552 44444432111111111211 46789999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC-CcceEEEecccccccccccceeeeeccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
+||+|.+.+ +++|.++|++||+++|+||+|+...+......+.+..+. .+..++++||||.+|++| ||+++++
T Consensus 188 ~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~ 261 (407)
T PRK09064 188 YSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSA 261 (407)
T ss_pred CCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCH
Confidence 999999888 888889999999999999999843332222222222221 233688999999999878 9999988
Q ss_pred cccccCCcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 294 ELLFSDGFPVAKDFNRIVCT--CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
+++ +.+...... ...+.++..+.++.+.++.... ....+++++++++++.+.|++.|+++.++ .+++
T Consensus 262 ~~~--------~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~i 330 (407)
T PRK09064 262 ALV--------DAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAAGIPVMPN-ESHI 330 (407)
T ss_pred HHH--------HHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCE
Confidence 774 444432221 1234566667766666652211 13446788899999999999988887654 5667
Q ss_pred EEEECCC-CChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 372 VWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 372 ~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+++.++. ....++...+++++||.+.+..... +.+.+++||++ +.+++|++++++.|++++
T Consensus 331 v~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 331 VPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVW 395 (407)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 7777753 2345677777666799998864332 22446899995 568999999999998875
No 128
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=5.9e-28 Score=234.21 Aligned_cols=343 Identities=10% Similarity=0.081 Sum_probs=225.0
Q ss_pred hcCCCCceEEecCCCC--CCC-ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC-CCCcEEEcC
Q 045431 58 LKYPDAEVISLGIGDT--TEP-IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI-EEGDIFVSD 133 (433)
Q Consensus 58 ~~~~~~~~i~l~~g~~--~~~-~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~-~~~~i~~~~ 133 (433)
...+++..|||..|.. .+. .++.+.+++.+++.+... ....|.+.. ..+|.+.+++++ +. ++++|++++
T Consensus 38 ~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~--~~~~~~~~~-~~~la~~l~~~~----~~~~~~~v~~~~ 110 (398)
T PRK03244 38 WDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGH--VSNLFATEP-QIALAERLVELL----GAPEGGRVFFCN 110 (398)
T ss_pred EECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccC--ccCccCCHH-HHHHHHHHHHhC----CCCCCCEEEEeC
Confidence 3345778999988643 334 378999999999986432 223464322 245555555543 43 357999999
Q ss_pred ChHHHHHH-HHHhcCCC-CEEEEeCCCChhhhhhHHHhCCc-ccccccccccceEEEeecCccCCcccCCCCCCCccEEE
Q 045431 134 GAKCDISR-LQIVFGSN-VTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIF 210 (433)
Q Consensus 134 G~~~al~~-l~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 210 (433)
|+++++.. +.....+| +.|+..+++|+++.......+.. .....+.....++..+|..+...+...+ .+++++|+
T Consensus 111 sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~avi 188 (398)
T PRK03244 111 SGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAV--DDDTAAVF 188 (398)
T ss_pred chHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhh--cCCeEEEE
Confidence 99999987 44334455 56777888998875444433211 1100010000133444432111111111 25788888
Q ss_pred EcCCCCccccCCCHHH-HHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeee
Q 045431 211 FCSPNNPTGAAATREQ-LTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~-~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
++.++||||.+++.++ +++|.++|++||+++|+||+|.++...+.+..+....-.+| +.+|||.++ +|+|+||+
T Consensus 189 iep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD----i~t~sK~l~-~G~~ig~~ 263 (398)
T PRK03244 189 LEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD----VVTLAKGLG-GGLPIGAC 263 (398)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC----EEEEchhhh-CCcccEEE
Confidence 8888999999997655 99999999999999999999987765543221111111233 348899998 99999999
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeee--cCC
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVY--GGK 367 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~ 367 (433)
+++++++ +.+.......+.+.+++.+.++.+.|+.... ++..++++++.+.+.+.|++++.... ...
T Consensus 264 ~~~~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g 332 (398)
T PRK03244 264 LAFGPAA--------DLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRG 332 (398)
T ss_pred EEcHHHH--------hhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEee
Confidence 9998874 4444333444567889999999998762211 34566777778888899988654221 123
Q ss_pred CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.|+++|+.++......+..++++ +||.+.+. +.+.+|++. ..+++++++++++|++++
T Consensus 333 ~g~~~~i~~~~~~~~~~~~~l~~-~Gv~~~~~------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 333 RGLLLGIVLTAPVAKAVEAAARE-AGFLVNAV------APDVIRLAPPLIITDAQVDAFVAALPAIL 392 (398)
T ss_pred ccEEEEEEEeccHHHHHHHHHHH-CCeEEeec------CCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 78899999974344556666655 59999873 236899994 468999999999999876
No 129
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=3e-27 Score=229.76 Aligned_cols=336 Identities=14% Similarity=0.131 Sum_probs=224.6
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCC----CCCCCHHHHHHHHHHHhccCCC-CCCcEEEcCChHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYG----AEQGEKPLRAAIASTFYKDLGI-EEGDIFVSDGAKCD 138 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~la~~l~~~~~~-~~~~i~~~~G~~~a 138 (433)
++|.|..+... +.|+.+.+++.+.+...........|. ...-..++|+++|+++ ++ ++++|++|+|++++
T Consensus 23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~~ 97 (406)
T PRK09295 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NARSAEELVFVRGTTEG 97 (406)
T ss_pred ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----CcCCCCeEEEeCCHHHH
Confidence 47888887754 578889999988886432101011110 0123568888888887 76 67899999999999
Q ss_pred HHHH-HH----hcCCCCEEEEeCCCChhhh----hhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCc
Q 045431 139 ISRL-QI----VFGSNVTMAVQDPSYPAYV----DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VART 206 (433)
Q Consensus 139 l~~l-~~----l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~ 206 (433)
++++ .. .+++||+|++.+++|++.. ...+..| .+++.++.+.++....+ +++ .+++
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~d~~~l~~~i~~~t 165 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVG------------AELRVIPLNPDGTLQLETLPALFDERT 165 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcC------------cEEEEEecCCCCCCCHHHHHHhcCCCc
Confidence 9974 43 4689999999999987643 2333445 47778887654332222 222 3578
Q ss_pred cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccce
Q 045431 207 DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 207 ~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+++++++|+||||.+++ +++|.++|+++|+++++|++|+.... +.++... +..+++.|++|.+|.+| +
T Consensus 166 ~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~~~~----~~D~~~~s~~K~~gp~G--~ 233 (406)
T PRK09295 166 RLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHH---PVDVQAL----DCDFYVFSGHKLYGPTG--I 233 (406)
T ss_pred EEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCcc---ccCchhc----CCCEEEeehhhccCCCC--c
Confidence 99999999999999998 78889999999999999999974321 3333322 23488999999888556 8
Q ss_pred eeeeccccccccCCcc-----------------hhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHH
Q 045431 287 GWTVIPKELLFSDGFP-----------------VAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (433)
||++++++++....+. +...-.++. ..+.+.....++.++++......+++..++.++.+
T Consensus 234 G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e---~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 310 (406)
T PRK09295 234 GILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFE---AGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLM 310 (406)
T ss_pred EEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcC---CCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9999988774211000 000001111 12344444444444443211123467778888889
Q ss_pred HHHHHHHhhc-CCeeecCC-CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEee--ccChh
Q 045431 350 DIIVETFNSL-GFKVYGGK-NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSA--FGHRG 419 (433)
Q Consensus 350 ~~l~~~l~~~-g~~~~~~~-~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~--~~~~~ 419 (433)
+++.+.|++. |+.+..+. .+..+.+.+++....++... +.++||.++.|..|.. ..++.+|+|+ +++++
T Consensus 311 ~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~ 389 (406)
T PRK09295 311 HYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHE 389 (406)
T ss_pred HHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHH-HHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHH
Confidence 9999999887 77776542 23455666776566666555 4667999999886542 1246899995 67999
Q ss_pred HHHHHHHHHHHhh
Q 045431 420 NVLEACKRFKHLY 432 (433)
Q Consensus 420 ~l~~~l~~l~~~l 432 (433)
|++.+++.|+++.
T Consensus 390 did~l~~~l~~i~ 402 (406)
T PRK09295 390 EVDRLVAGLQRIH 402 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998763
No 130
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=3.8e-27 Score=228.72 Aligned_cols=336 Identities=16% Similarity=0.153 Sum_probs=221.7
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCC--CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYS--GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
.++++|+.+++ .+..+|.+.+++.+++.+++.....+ .|+......+|++.+|+++ +. ++.+++++|+.+..
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~----g~-~~~l~~~sG~~an~ 119 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH----GK-ESALVFTSGYVAND 119 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh----CC-CeEEEECchHHHHH
Confidence 56899998886 57789999999999998764322111 2233344677888888886 53 45667777644433
Q ss_pred HHHHHhcC--CCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC--CCccEEEEcCCC
Q 045431 140 SRLQIVFG--SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV--ARTDIIFFCSPN 215 (433)
Q Consensus 140 ~~l~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~p~ 215 (433)
.++..+.. +++.|+.+...|......+...|. ++..++..+...+..-+... .++++|++++|+
T Consensus 120 ~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~ 187 (402)
T TIGR01821 120 ATLATLAKIIPGCVIFSDELNHASMIEGIRHSGA------------EKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVY 187 (402)
T ss_pred HHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCC------------eEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence 34555543 777777776677666666665552 44444432111111111111 357888999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC-CcceEEEecccccccccccceeeeecccc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
||||.+.+ +++|.++|++||+++|+||+|+...+......+....+. .+..++++||||.+|++| ||++++++
T Consensus 188 ~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~ 261 (402)
T TIGR01821 188 SMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRK 261 (402)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHH
Confidence 99999988 788889999999999999999843333222222222111 223588899999999878 99998887
Q ss_pred ccccCCcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 295 LLFSDGFPVAKDFNRIVCT--CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++ +.+...... .+.+.++..+.++.+.++..... ...++.++++++++.+.|+++|+++.++ .+.++
T Consensus 262 ~~--------~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~i~ 330 (402)
T TIGR01821 262 LI--------DAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN-PSHIV 330 (402)
T ss_pred HH--------HHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEE
Confidence 74 444432211 12345677777777777532211 4455667788999999999988887665 56666
Q ss_pred EEECCCC-ChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 373 WVQFPGR-SSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
++.++.. ...++...+++++||.+.+..... +.+..++||++ +.+++|++++++.|++++
T Consensus 331 ~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 331 PVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVW 394 (402)
T ss_pred EEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 6766531 345666776666799998854322 23457899996 569999999999998875
No 131
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=2.9e-27 Score=231.03 Aligned_cols=338 Identities=15% Similarity=0.141 Sum_probs=227.7
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCC-CCCCC---CCCCHHHHHHHHHHHhccCCCC-CCcEEEcCChHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGY-SGYGA---EQGEKPLRAAIASTFYKDLGIE-EGDIFVSDGAKC 137 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~Y~~---~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~G~~~ 137 (433)
.+.+.|..+... +.|+.+.+++.+.+......... ..|.. .....++|+.+++++ +++ +++|++|+|+++
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NASTSREIVFTRNATE 105 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCHHH
Confidence 357899888775 68888999998887654211111 11111 123468899999987 774 589999999999
Q ss_pred HHHHH-HH----hcCCCCEEEEeCCCChhhhhhH----HHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCC
Q 045431 138 DISRL-QI----VFGSNVTMAVQDPSYPAYVDSS----VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VAR 205 (433)
Q Consensus 138 al~~l-~~----l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~ 205 (433)
++.++ .. .+++||+|++.++.|++....+ +..| .+++.++.+.++.+..+ +++ .++
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g------------~~v~~v~~~~~~~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTG------------AVLKFVGLTPDEVLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcC------------CEEEEEecCCCCCcCHHHHHHHhccC
Confidence 99974 33 3689999999999888644333 3445 37778887654332222 222 358
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccc
Q 045431 206 TDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVR 285 (433)
Q Consensus 206 ~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r 285 (433)
+++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.. ..+..+..+ +..+++.|++|.+|.+|
T Consensus 174 t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g---~~~~~~~~~----~~d~~~~s~~K~~gp~G-- 241 (424)
T PLN02855 174 TKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVP---HMPVDVQTL----GADFLVASSHKMCGPTG-- 241 (424)
T ss_pred ceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcC---CcCCCchhc----CCCEEEeecccccCCCc--
Confidence 899999999999999999 678889999999999999999631 112333322 22478999999877555
Q ss_pred eeeeeccccccccCCcch----------------hHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHH
Q 045431 286 LGWTVIPKELLFSDGFPV----------------AKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 286 ~G~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (433)
+||++++++++....+.. ...-.++. ..+.+.....++.++++......+++.+++..+.+
T Consensus 242 ~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e---~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 318 (424)
T PLN02855 242 IGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFE---AGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELG 318 (424)
T ss_pred cEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhcc---CCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 899999988753211100 00001111 11233333333333333111124578888889999
Q ss_pred HHHHHHHhhc-CCeeecCC------CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEee--
Q 045431 350 DIIVETFNSL-GFKVYGGK------NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSA-- 414 (433)
Q Consensus 350 ~~l~~~l~~~-g~~~~~~~------~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~-- 414 (433)
+.+.+.|+++ |+++..+. .+.++.+.+++....++...|.+++||.++.|..+.. .-++++|+|+
T Consensus 319 ~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ 398 (424)
T PLN02855 319 TYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYF 398 (424)
T ss_pred HHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEecc
Confidence 9999999887 88877532 2457778887666677777766556999998876532 1246899995
Q ss_pred ccChhHHHHHHHHHHHhh
Q 045431 415 FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 415 ~~~~~~l~~~l~~l~~~l 432 (433)
+++++|++.+++.|++++
T Consensus 399 ynt~~di~~l~~~l~~~~ 416 (424)
T PLN02855 399 YNTKEEVDAFIHALKDTI 416 (424)
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 789999999999998875
No 132
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=6.3e-27 Score=227.46 Aligned_cols=335 Identities=16% Similarity=0.150 Sum_probs=218.0
Q ss_pred CCCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCC-CC-CCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHH
Q 045431 61 PDAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYS-GY-GAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~-~Y-~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~ 137 (433)
++..+++|+.+++ ++...|.+.+++.+++.+++.....+ .+ .......+|++.+|+++ +. +.+++++|+++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~--~~~~~~~sG~~ 125 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF--ESCLLCQSGWA 125 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC--CcEEEECCHHH
Confidence 4567899988876 67788999999999998764322111 12 11235678888888886 54 45677888888
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCC
Q 045431 138 DISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNN 216 (433)
Q Consensus 138 al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~n 216 (433)
++.+ +..++.+||.|+++.+.|......+...|. +++.++..+.+.+...+. ..++++|++++|+|
T Consensus 126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~-~~~~~lV~v~~v~n 192 (407)
T PRK07179 126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGA------------QAHPFRHNDVDHLRRQIE-RHGPGIIVVDSVYS 192 (407)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCC------------eEEEecCCCHHHHHHHHH-hcCCeEEEECCCCC
Confidence 8876 677889999999999999888777766662 444444321111111111 12467778889999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc-ccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF-EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|||.+++ +++|.++|++||+++|+||+|+....+....++. .++..+...+++.|+||.+| + |+||+++++++
T Consensus 193 ~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~--~~G~l~~~~~~ 266 (407)
T PRK07179 193 TTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-G--RAGIITCPREL 266 (407)
T ss_pred CCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-c--cCeEEEeCHHH
Confidence 9999999 6788999999999999999998533322222222 22211122488999999986 3 68999998877
Q ss_pred cccCCcchhHHHHHHHhh-ccCCC-cHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEE
Q 045431 296 LFSDGFPVAKDFNRIVCT-CFNGA-SNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVW 373 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~ 373 (433)
+ +.+...... ...++ ++....++.++++.. ...+..+++++++++++.+.|+++|+.+.. .+.+++
T Consensus 267 ~--------~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~g~~v~~--~~~i~~ 334 (407)
T PRK07179 267 A--------EYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSELGYNIRS--ESQIIA 334 (407)
T ss_pred H--------HHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCEEE
Confidence 4 333322111 11122 222222233333321 112557788999999999999988887662 467888
Q ss_pred EECCCCChHHHHHHHHHcCCeEecCCC-CCCCCCCCeEEEeec--cChhHHHHHHHHHHHhh
Q 045431 374 VQFPGRSSWDVFSEILEKTHVVTTPGS-GFGPGGEGFIRVSAF--GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~gi~v~~g~-~f~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~l 432 (433)
+.++.....+.+...+.++||.+..-. ...+.+.+++||++. .+++++++++++|++++
T Consensus 335 l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~ 396 (407)
T PRK07179 335 LETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREAR 396 (407)
T ss_pred EEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 887532233444444555699742100 001223578999974 58999999999998875
No 133
>PLN02721 threonine aldolase
Probab=99.96 E-value=5.9e-27 Score=224.03 Aligned_cols=320 Identities=18% Similarity=0.227 Sum_probs=205.7
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQ 143 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~ 143 (433)
.+++|+.+.++. +++.+.+++.+... . .....| .....+|++++++++ +.+. .+++++|+.+.+.++.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~--~--~~~~~~--~~~~~~l~~~la~~~----~~~~-~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEV--D--DDVLGY--DPTALRLEEEMAKIF----GKEA-ALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccC--C--CcccCC--CHHHHHHHHHHHHHh----CCce-eEEecCccHHHHHHHH
Confidence 368999999885 56777777765311 1 222234 334799999999998 5442 4556666655554456
Q ss_pred HhcC-CCCEEEEeCCCChhhhh---hHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--C-------CCccEE
Q 045431 144 IVFG-SNVTMAVQDPSYPAYVD---SSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--V-------ARTDII 209 (433)
Q Consensus 144 ~l~~-~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-------~~~~~i 209 (433)
.++. +||+|++++|+|..... .....| .+++.++.+++...+.+ +++ . +++++|
T Consensus 74 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 74 VHCDVRGSEVILGDNSHIHLYENGGISTLGG------------VHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHccCCCCeEEEcCccceehhcccchhhhcC------------ceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 6676 99999999999865444 344455 36777776543322222 221 1 478899
Q ss_pred EEcC-CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceee
Q 045431 210 FFCS-PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 210 ~l~~-p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
++++ |+||||.+++.+++++|.++|++||++||+|++|..........+...+....+ .++.|+||+++. ++|+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~ 216 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGS 216 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceee
Confidence 9986 588999999999999999999999999999999863221100111111111122 445589999863 3565
Q ss_pred -eeccccccccCCcchhHHHHHHHhhccCCCcHHHHHH--HHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCee-
Q 045431 289 -TVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAG--GLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKV- 363 (433)
Q Consensus 289 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~--~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~- 363 (433)
++++++++ +.+...........+...+.+ +...++ .+.+++ ++..++++.+.+.|+++ ++.+
T Consensus 217 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~ 283 (353)
T PLN02721 217 VIVGSKSFI--------RKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPKL-EDDHKKAKLLAEGLNQIKGLRVN 283 (353)
T ss_pred EEecCHHHH--------HhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHHHHHhCCCcEEe
Confidence 66777764 444444332222222222222 222232 223333 33456778899999987 7754
Q ss_pred ecCCCccEEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 364 YGGKNAPYVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 ~~~~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
..+..++++|++++. ....++...|. ++||.+.|+. .+++|+++ +.+++++++++++|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 284 VAAVETNIVYFDITDGSRITAEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTLSCFQQAA 350 (353)
T ss_pred cCCccceEEEEEccCCccccHHHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHHHHHHHHh
Confidence 334456789999874 35566666665 6699999873 46899996 458999999999999876
No 134
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=4.7e-27 Score=228.52 Aligned_cols=341 Identities=15% Similarity=0.170 Sum_probs=225.4
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCC----CCCCCHHHHHHHHHHHhccCCCC-CCcEEEcCChH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYG----AEQGEKPLRAAIASTFYKDLGIE-EGDIFVSDGAK 136 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~G~~ 136 (433)
+.+++.|..+... ++|+.+.+++.+.+...........+. ......++|+.+++++ +++ +++|++|+|++
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~~~~~v~~~~g~t 90 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAASDEEIVFTRGTT 90 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHH
Confidence 3467889888876 577888899888775421101110110 1134668899999987 776 78999999999
Q ss_pred HHHHHH-HHh----cCCCCEEEEeCCCChhhhh----hHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CC
Q 045431 137 CDISRL-QIV----FGSNVTMAVQDPSYPAYVD----SSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VA 204 (433)
Q Consensus 137 ~al~~l-~~l----~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~ 204 (433)
+++.++ ..+ +++||+|+++++.|++... .....| .+++.++.+.++.+..+ +++ .+
T Consensus 91 ~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~i~~ 158 (403)
T TIGR01979 91 ESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTG------------ATLKFIPLDDDGTLDLDDLEKLLTE 158 (403)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcC------------cEEEEEecCCCCCCCHHHHHHHhcc
Confidence 999874 433 5899999999999887543 333445 47778887643322222 221 36
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccc
Q 045431 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGV 284 (433)
Q Consensus 205 ~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~ 284 (433)
+++++++++|+||||..++ +++|.++|++||+++|+|++|+.... +..+... +..+++.|++|.+|.+|
T Consensus 159 ~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~~gp~G- 227 (403)
T TIGR01979 159 KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM---PVDVQAL----DCDFYVFSGHKMYGPTG- 227 (403)
T ss_pred CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc---ccCcccc----CCCEEEEecccccCCCC-
Confidence 7899999999999999999 77888999999999999999974211 2333222 23488999999988666
Q ss_pred ceeeeeccccccccCCcchh-----H-------HHHH-HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHH
Q 045431 285 RLGWTVIPKELLFSDGFPVA-----K-------DFNR-IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDI 351 (433)
Q Consensus 285 r~G~l~~~~~~~~~~~~~~~-----~-------~~~~-~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 351 (433)
+|+++++++++..-.+... + .+.. .......+++.....++.++++......+++.+++..+.++.
T Consensus 228 -~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 228 -IGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAY 306 (403)
T ss_pred -ceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 8999998876421100000 0 0000 000011123444444444444321112346778888899999
Q ss_pred HHHHHhhc-CCeeecCC----CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCC------CCCCCeEEEee--ccCh
Q 045431 352 IVETFNSL-GFKVYGGK----NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFG------PGGEGFIRVSA--FGHR 418 (433)
Q Consensus 352 l~~~l~~~-g~~~~~~~----~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~------~~~~~~iRi~~--~~~~ 418 (433)
+.+.|+++ |+++..|. .+.++.+.+++.+..++.. .++++||.+.+|..+. ...++++|+|+ ++++
T Consensus 307 l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~ 385 (403)
T TIGR01979 307 ALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTE 385 (403)
T ss_pred HHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCH
Confidence 99999887 78887653 2556667777655556655 4556799999886432 11257899996 5689
Q ss_pred hHHHHHHHHHHHhh
Q 045431 419 GNVLEACKRFKHLY 432 (433)
Q Consensus 419 ~~l~~~l~~l~~~l 432 (433)
+|++++++.|++++
T Consensus 386 ~di~~l~~~l~~~~ 399 (403)
T TIGR01979 386 EDIDALVEALKKVR 399 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 135
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=4.4e-27 Score=223.48 Aligned_cols=309 Identities=15% Similarity=0.095 Sum_probs=208.1
Q ss_pred CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEE
Q 045431 74 TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTM 152 (433)
Q Consensus 74 ~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~V 152 (433)
++++|+.+++++.+.... ...|++.....++++.+++++ + ++++++++|+++++.+ +..++++||.|
T Consensus 7 ~~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~~a~~~----g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v 74 (338)
T cd06502 7 VTGPTPEMLEAMAAANVG------DDVYGEDPTTAKLEARAAELF----G--KEAALFVPSGTAANQLALAAHTQPGGSV 74 (338)
T ss_pred CCCCCHHHHHHHHhcccC------CcccCCCHHHHHHHHHHHHHh----C--CCeEEEecCchHHHHHHHHHhcCCCCeE
Confidence 457888999999886531 126766777888999998887 5 4567777777788876 57788999999
Q ss_pred EEeCCCChhhhh---hHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--C-------CCccEEEEcCCCCccc
Q 045431 153 AVQDPSYPAYVD---SSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--V-------ARTDIIFFCSPNNPTG 219 (433)
Q Consensus 153 l~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-------~~~~~i~l~~p~nPtG 219 (433)
+++.|+|..+.. .....| .+++.++.+. ...+.+ +++ . +++++|++++|+|| |
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g 140 (338)
T cd06502 75 ICHETAHIYTDEAGAPEFLSG------------VKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-G 140 (338)
T ss_pred EEecCcceeeecCCcHHHHcC------------ceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-c
Confidence 999999976543 233456 3666776643 222111 111 1 26889999999997 6
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
.+++.+++++|+++|++||+++|+|++|..+.......++.......+ +++.|+||+++++| .++++++++++
T Consensus 141 ~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~~~~~--g~~~~~~~~~~--- 213 (338)
T cd06502 141 TVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD--SVSFCLSKGGGAPV--GAVVVGNRDFI--- 213 (338)
T ss_pred cccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC--EEEEeccccCCCcc--ceEEECCHHHH---
Confidence 677999999999999999999999999864322111112322221122 56889999999877 23455677664
Q ss_pred CcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC
Q 045431 300 GFPVAKDFNRIVCT--CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP 377 (433)
Q Consensus 300 ~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~ 377 (433)
+.+...... .....+.+.+.++...|+...+ .+..+++.++++++.+.|+++|+.+.+ ..++++.+.++
T Consensus 214 -----~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~v~~~ 284 (338)
T cd06502 214 -----ARARRRRKQAGGGMRQSGFLAAAGLAALENDLW---LRRLRHDHEMARRLAEALEELGGLESE-VQTNIVLLDPV 284 (338)
T ss_pred -----HHHHHHHHHhCCChhhHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHHHHhcCCCccc-ccCCeEEEecC
Confidence 455443322 2233566778888888875432 445577778889999999998876544 45667777765
Q ss_pred CCC--hHHHHHHHH--HcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHH
Q 045431 378 GRS--SWDVFSEIL--EKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKH 430 (433)
Q Consensus 378 ~~~--~~~~~~~l~--~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 430 (433)
... ...+...+. .++|+.+.+.. .+++|++. ..++++++++++++++
T Consensus 285 ~~~~~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 285 EANAVFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CccHHHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 211 112222222 14599987642 27899995 4589999999999875
No 136
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.4e-26 Score=221.63 Aligned_cols=314 Identities=13% Similarity=0.153 Sum_probs=211.8
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCC--CCHHHHHHHHHHHhccCCCCC-CcEEEcCChHHHHHH-HHHhcCCCC
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQ--GEKPLRAAIASTFYKDLGIEE-GDIFVSDGAKCDISR-LQIVFGSNV 150 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~--g~~~lr~~la~~l~~~~~~~~-~~i~~~~G~~~al~~-l~~l~~~gd 150 (433)
.+.|+.+++++.+.+.. ..| +.. -..++++.+++++ ++++ +.+++++|+++++.+ +.+++++||
T Consensus 8 ~~~~~~v~~a~~~~~~~-------~~~-~~~~~~~~~~~~~la~~~----g~~~~~~~~~~~~~t~al~~~~~~~~~~g~ 75 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG-------HRS-PEFLALMDEILEGLRYVF----QTENGLTFLLSGSGTGAMEAALSNLLEPGD 75 (356)
T ss_pred cCCCHHHHHHhCCCccC-------CCC-HHHHHHHHHHHHHHHHHh----cCCCCCEEEEecCcHHHHHHHHHHhCCCCC
Confidence 45778888888653321 122 211 1446667777776 7754 457788888999987 578889999
Q ss_pred EEEEeCCCChh--hhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CC-CccEEEEcCCCCccccCCCH
Q 045431 151 TMAVQDPSYPA--YVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VA-RTDIIFFCSPNNPTGAAATR 224 (433)
Q Consensus 151 ~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~-~~~~i~l~~p~nPtG~~~~~ 224 (433)
+|++..++|++ +...++..| .+++.++.+++.....+ +++ .+ ++++|++++|+||||.+++
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~- 142 (356)
T cd06451 76 KVLVGVNGVFGDRWADMAERYG------------ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP- 142 (356)
T ss_pred EEEEecCCchhHHHHHHHHHhC------------CCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC-
Confidence 99999988776 345666677 47777877643222211 222 23 7899999999999999988
Q ss_pred HHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchh
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVA 304 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 304 (433)
+++|.++|+++|+++++|++|+. +..+.++... +..++++|++|+++ .+.++||++.+++++
T Consensus 143 --~~~i~~~a~~~~~~li~D~~~~~---g~~~~~~~~~----~~d~~~~s~~K~l~-~p~g~G~l~~~~~~~-------- 204 (356)
T cd06451 143 --LEGIGALAKKHDALLIVDAVSSL---GGEPFRMDEW----GVDVAYTGSQKALG-APPGLGPIAFSERAL-------- 204 (356)
T ss_pred --HHHHHHHHHhcCCEEEEeeehhc---cCcccccccc----CccEEEecCchhcc-CCCCcceeEECHHHH--------
Confidence 66788888999999999998873 1112333222 12366778999997 445689999988875
Q ss_pred HHHHH----------------HHh---hccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeec
Q 045431 305 KDFNR----------------IVC---TCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYG 365 (433)
Q Consensus 305 ~~~~~----------------~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 365 (433)
+.+.. ... ....+++...+.++.++++......+++..++.+++++++.+.|++.|+.+..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 284 (356)
T cd06451 205 ERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLA 284 (356)
T ss_pred HHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 22211 000 11222344444444455442222345778888899999999999988887754
Q ss_pred CC---CccEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhhC
Q 045431 366 GK---NAPYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 366 ~~---~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
+. .+.++|+.++ +.+..++...|.+++||.+.+|..+ ..+++||+++ +++++++++++++|+++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~--~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 285 KPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGP--TAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEeccccc--ccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 32 3455678877 4456667767665559999998743 2346999996 4689999999999999875
No 137
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=1.4e-26 Score=225.19 Aligned_cols=333 Identities=17% Similarity=0.162 Sum_probs=217.6
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHh-hccc-CCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSY-ALST-QEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~-~~~~-~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
..++|..++. ..++.+.+++.+.+. ++.. ..+...|....+.+.+++.+++++.+.++++..+|++++| ++++.+
T Consensus 20 ~~~~~~~~~~--~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sg-t~a~~~ 96 (402)
T cd00378 20 ETLELIASEN--FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSG-SQANLA 96 (402)
T ss_pred hCeeeeccCC--cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCc-HHHHHH
Confidence 3688877765 357889998887653 3211 1223346556677888887666665545776666777765 577775
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhh-----HHHhCCcccccccccccceEEEeecCccC-CcccCCC---C---CCCccE
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDS-----SVIMGQTGEFQKDAEKYGKIEYMRCTAEN-GFFPDLS---T---VARTDI 208 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~---~~~~~~ 208 (433)
+..+++|||+|++++|+|+++... ++..| ..+..++.+.+. ++..+++ + ..++++
T Consensus 97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~ 164 (402)
T cd00378 97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASG------------KLFESVPYGVDPETGLIDYDALEKMALEFKPKL 164 (402)
T ss_pred HHHHhcCCCCEEEEecCccCccccccccccccccc------------eeEEEecCCcCcccCCcCHHHHHHHHHhCCCCE
Confidence 688899999999999999876543 33344 244445443321 2233322 1 247899
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccc-cccccCCC-CCcccccCCCCcceEEEecccccccccccce
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAY-ALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~-~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+++++|+||+ ..+ +++|+++|++||+++|+|++| .++.+.+. +.++. . .+ ++++|+||++ +|+|.
T Consensus 165 v~~~~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~-~d--v~~~s~sK~l--~G~~g 231 (402)
T cd00378 165 IVAGASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---G-AD--VVTTTTHKTL--RGPRG 231 (402)
T ss_pred EEecCcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc---C-Cc--EEEeccccCC--CCCCc
Confidence 9988888864 333 889999999999999999996 44444432 22222 1 22 7899999987 78999
Q ss_pred eeeeccc-cccccCCcchhHHHHHHHhhccCCCcHH-HHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeee
Q 045431 287 GWTVIPK-ELLFSDGFPVAKDFNRIVCTCFNGASNI-SQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVY 364 (433)
Q Consensus 287 G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 364 (433)
||+++++ +++ +.+.+.......+.+.+ .+.++..++......+.++.+++++++++.+.+.|+++|+.+.
T Consensus 232 g~i~~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 303 (402)
T cd00378 232 GLILTRKGELA--------KKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVV 303 (402)
T ss_pred eEEEeccHHHH--------HHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEe
Confidence 9999987 553 55544333222222222 2222222232111124567788899999999999999998875
Q ss_pred -cCCCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCC----CCCCCCCeEEEeecc------ChhHHHHHHHHHHHhh
Q 045431 365 -GGKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSG----FGPGGEGFIRVSAFG------HRGNVLEACKRFKHLY 432 (433)
Q Consensus 365 -~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~----f~~~~~~~iRi~~~~------~~~~l~~~l~~l~~~l 432 (433)
.+.+++++|+++++ ......+..+++++||.+.++.. ++.....++|+++.. ++++++++++.|++++
T Consensus 304 ~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 304 SGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred ecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 45688999999973 22334455566778999986432 111234689999622 5899999999999875
No 138
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.7e-26 Score=207.37 Aligned_cols=343 Identities=20% Similarity=0.235 Sum_probs=242.7
Q ss_pred CCCceEEecCCCCC-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-cCC-CCCCcE--EEcCCh
Q 045431 61 PDAEVISLGIGDTT-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-DLG-IEEGDI--FVSDGA 135 (433)
Q Consensus 61 ~~~~~i~l~~g~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~~~-~~~~~i--~~~~G~ 135 (433)
+.++-|||+.|.+. ...-..+.+++.++-.+.........|-+..|.+++++++++.+.. ... +..+.| +-|.|+
T Consensus 24 ~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GG 103 (396)
T COG1448 24 PRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGG 103 (396)
T ss_pred CCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCc
Confidence 34467999999862 2222223333333333332235566899999999999999999853 111 233444 467899
Q ss_pred HHHHHHH---HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-------CCCCCC
Q 045431 136 KCDISRL---QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-------LSTVAR 205 (433)
Q Consensus 136 ~~al~~l---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 205 (433)
+.||.+. ..-+.+...|.+++|+|+++..++..+| .++..+|.-+...-..+ +...+.
T Consensus 104 TGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aG------------l~v~~Y~Yyd~~~~~~df~~mla~L~~a~~ 171 (396)
T COG1448 104 TGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAG------------LEVETYPYYDAETKGLDFDGMLADLKTAPE 171 (396)
T ss_pred chHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcC------------CceeeeeccccccccccHHHHHHHHHhCCC
Confidence 9998863 4445677889999999999999999999 46666665332222222 333455
Q ss_pred ccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcccccCCCCcceEEEeccccccccc
Q 045431 206 TDIIFFC-SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN--PRSIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 206 ~~~i~l~-~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
-.+|+|. .+|||||.-++.+++++|+++.++.+.+.+.|-+|.+|..+-. ...+..+.....-+++..||||.||+-
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLY 251 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLY 251 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhh
Confidence 5677776 5599999999999999999999999999999999998865421 111211111122379999999999999
Q ss_pred ccceeeee--ccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-----hHHHHHHHHHHHHHHHHHHH
Q 045431 283 GVRLGWTV--IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-----KAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 283 G~r~G~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~ 355 (433)
|-|+|.+. +.+... ..++...+........+.++.-...++...|++... ..++.+++++.++|..|.+.
T Consensus 252 gERVGa~~vva~~~~~---a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~ 328 (396)
T COG1448 252 GERVGALSVVAEDAEE---ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDA 328 (396)
T ss_pred hhccceeEEEeCCHHH---HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999643 333332 122233445555555666777777777888886554 34788999999999999999
Q ss_pred Hhhc----CCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc-ChhHHHHHHHHHHH
Q 045431 356 FNSL----GFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG-HRGNVLEACKRFKH 430 (433)
Q Consensus 356 l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~~l~~ 430 (433)
|+++ .+.++..+.|||.+..+ +.+.+.+|.+++||.+..+ | |||++. ++..++...+.+.+
T Consensus 329 L~~~~~~~~f~~i~~Q~GMFsy~Gl----s~~QV~rLree~~IY~v~s--------G--Ri~vaGl~~~ni~~va~ai~~ 394 (396)
T COG1448 329 LKALGAPRNFDFIISQRGMFSYTGL----SPEQVDRLREEFGIYLVAS--------G--RINVAGLNTSNIDYVAKAIAA 394 (396)
T ss_pred HHhhCCCcccchHhhcCceeecCCC----CHHHHHHHHHhccEEEecC--------C--eeeeccCChhhHHHHHHHHHh
Confidence 9985 47778888999988754 3567788899999999742 2 899754 99999999999987
Q ss_pred hh
Q 045431 431 LY 432 (433)
Q Consensus 431 ~l 432 (433)
++
T Consensus 395 v~ 396 (396)
T COG1448 395 VL 396 (396)
T ss_pred hC
Confidence 63
No 139
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=6.8e-27 Score=225.61 Aligned_cols=335 Identities=15% Similarity=0.118 Sum_probs=222.0
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCC----CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYG----AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.|..+... ++|+.+.+++.+.+........ ..|. ...-..++|+.+++++ ++++++|++|+|+++++.+
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~i~~~~g~t~a~~~ 75 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNES-SLHDIGGTASSLLQVCRKTFAEMI----GGEEQGIYFTSGGTESNYL 75 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCc-cccHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCcHHHHHHH
Confidence 445555543 5788899999887764321111 1110 0122456777777776 8889999999999999886
Q ss_pred -HHHhc----CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcC
Q 045431 142 -LQIVF----GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCS 213 (433)
Q Consensus 142 -l~~l~----~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~ 213 (433)
+..++ ++||.|++..+.|+.+...+..+...+ .++..++.+.++..+.+ +++ .+++++|++++
T Consensus 76 ~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~ 146 (381)
T PRK02948 76 AIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQG---------YTVTEIPVDKSGLIRLVDLERAITPDTVLASIQH 146 (381)
T ss_pred HHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCC---------CEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEEC
Confidence 45554 578999999988887766554443222 37778887644322222 222 25788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|+||||.+++ +++|.++|+++|+++|+|+++.. .. .+..+... +..+++.|+||.+|.+| +|++++++
T Consensus 147 ~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~-g~--~~~~~~~~----~~d~~~~s~~K~~gp~G--~G~l~~~~ 214 (381)
T PRK02948 147 ANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTF-GK--LPIDVFEM----GIDSLSVSAHKIYGPKG--VGAVYINP 214 (381)
T ss_pred CcCCcEeehh---HHHHHHHHHHcCCEEEEEChhhc-cc--cccCcccC----CCCEEEecHHhcCCCCc--EEEEEEcC
Confidence 9999999988 67888999999999999987663 21 12222222 34588999999998778 79998887
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCcc---
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAP--- 370 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~--- 370 (433)
++... ...............+++.+++.++.++++.. .+++++.++++++.++++.+.|+++|+++.......
T Consensus 215 ~~~~~---~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~ 290 (381)
T PRK02948 215 QVRWK---PVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCL 290 (381)
T ss_pred CCCCC---CcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCc
Confidence 65100 00000000011123457778888778777632 245788889999999999999999887654321111
Q ss_pred --EEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC-----------------CCCCeEEEee--ccChhHHHHHHHHHH
Q 045431 371 --YVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP-----------------GGEGFIRVSA--FGHRGNVLEACKRFK 429 (433)
Q Consensus 371 --~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-----------------~~~~~iRi~~--~~~~~~l~~~l~~l~ 429 (433)
.+.+.+++.+..++...+ .++||.+++|..|.. ...+++|+|+ +++++|++++++.|+
T Consensus 291 ~~i~~~~~~~~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~ 369 (381)
T PRK02948 291 PHIIGVTIKGIEGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALE 369 (381)
T ss_pred CCEEEEEeCCCCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHH
Confidence 233344554556666665 566999999886421 1147899996 468999999999998
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
+++
T Consensus 370 ~~~ 372 (381)
T PRK02948 370 TIG 372 (381)
T ss_pred HHH
Confidence 865
No 140
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=1.5e-26 Score=221.69 Aligned_cols=280 Identities=14% Similarity=0.125 Sum_probs=191.3
Q ss_pred CHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceE
Q 045431 107 EKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKI 185 (433)
Q Consensus 107 ~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 185 (433)
..++++.+|+++ +++ ++++++|+++++.. +..++++||.|+++.+.|.+....++..| .++
T Consensus 53 ~~~~~e~lA~~~----g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g------------~~~ 114 (370)
T TIGR02539 53 IHDFLEDLAEFL----GMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAG------------LNV 114 (370)
T ss_pred HHHHHHHHHHHh----CCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcC------------CEE
Confidence 567888899887 654 56678999999987 57788999999999999777666677777 477
Q ss_pred EEeecCccCCcccCCC---C-C--------CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 186 EYMRCTAENGFFPDLS---T-V--------ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 186 ~~~~~~~~~~~~~~~~---~-~--------~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
+.++.+.+.++..+++ + . .++++|++++|+||||...+ +++|.++|+++|+++|+|++|+....
T Consensus 115 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~- 190 (370)
T TIGR02539 115 KEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRM- 190 (370)
T ss_pred EEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCc-
Confidence 7888753322333322 1 1 26789999999999999877 77888899999999999999996321
Q ss_pred CCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhcc--------CCCcHHHHHH
Q 045431 254 DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCF--------NGASNISQAG 325 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~q~~ 325 (433)
+.+.... +..++++||||+++ +|.|+||++++++++ +.+........ .......+.+
T Consensus 191 --~~~~~~~----~~di~v~s~sK~~~-~~g~~G~l~~~~~~i--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (370)
T TIGR02539 191 --PVSAKEI----GADFIVGSGHKSMA-ASGPCGVLGMSEEWE--------DIVLRKSRYSPVKEVELLGCTSRGAPIVT 255 (370)
T ss_pred --CCCHHHc----CCCEEEeeCccccc-CCCCEEEEEECHHHH--------hhhcccccCCccceeeeecccccccHHHH
Confidence 2222222 23477899999998 677899999998886 33333221100 1111123443
Q ss_pred HHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeee--cCCCccEEEEECCCC---------ChHHHHHHHHHcCCe
Q 045431 326 GLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVY--GGKNAPYVWVQFPGR---------SSWDVFSEILEKTHV 394 (433)
Q Consensus 326 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~g~~~~~~~~~~---------~~~~~~~~l~~~~gi 394 (433)
+.+++... .+++++..+.++. ++++.+.|+++|+.+. .+..++|++++++.. ....+.+.| +++||
T Consensus 256 ~~~al~~~-~~~l~~~~~~~~~-~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L-~e~GI 332 (370)
T TIGR02539 256 MMASFPHV-VERVKRWDEEVKK-TRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEEL-KKRGI 332 (370)
T ss_pred HHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHH-HhCCC
Confidence 44444311 2334444444444 4689999999998863 356788999998632 122355555 45599
Q ss_pred E-ecCCCCCCCCCCCeEEEee-ccChhHHHHHHHHHHHhh
Q 045431 395 V-TTPGSGFGPGGEGFIRVSA-FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 395 ~-v~~g~~f~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~l 432 (433)
. +++| .++++|+++ ..+++++++++++|++++
T Consensus 333 ~~ir~~------~~~~iRis~~~~t~e~i~~l~~~L~~~~ 366 (370)
T TIGR02539 333 HGIRSG------QTKYFKLSVYGLTKEQVEYVVDSFEEIV 366 (370)
T ss_pred ccccCC------cceEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 7 5543 246899995 459999999999998875
No 141
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=2e-26 Score=222.73 Aligned_cols=341 Identities=13% Similarity=0.167 Sum_probs=214.9
Q ss_pred HhcCCCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....+++..+|+..|.. --..+|.+.+++.+++.+... .. ..| ..+....+++.+.+.. ..+++++++
T Consensus 25 ~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~-~~-~~~-----~~~~~~~la~~l~~~~--~~~~v~~~~ 95 (389)
T PRK01278 25 LIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH-VS-NLY-----RIPEQERLAERLVENS--FADKVFFTN 95 (389)
T ss_pred EEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCc-cc-ccc-----CChHHHHHHHHHHhhC--CCCEEEEcC
Confidence 34456778999987532 123678999999999875321 11 112 1233344555543322 347999999
Q ss_pred ChHHHHHH-HHHh----cCCCC----EEEEeCCCChhhhhhHHHhCCcccccc-cccccceEEEeecCccCCcccCCCCC
Q 045431 134 GAKCDISR-LQIV----FGSNV----TMAVQDPSYPAYVDSSVIMGQTGEFQK-DAEKYGKIEYMRCTAENGFFPDLSTV 203 (433)
Q Consensus 134 G~~~al~~-l~~l----~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (433)
|+++++.. +..+ ..+|| +|++.+++|+++.......+....+.. +.........++..+...+...+ .
T Consensus 96 sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l--~ 173 (389)
T PRK01278 96 SGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAI--T 173 (389)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhh--C
Confidence 99999986 4332 35676 899999999998766665553221110 00000111122221111111111 2
Q ss_pred CCccEEEEcCCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccc
Q 045431 204 ARTDIIFFCSPNNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 204 ~~~~~i~l~~p~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
+++++|++..++||+| .+++.+++++|.++|++||+++|+||+|.++.+.+.........-.+| +.||||.++ +
T Consensus 174 ~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~ 248 (389)
T PRK01278 174 PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD----IMAVAKGIG-G 248 (389)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC----EEEEehhcc-C
Confidence 4788888876688888 788999999999999999999999999998766554322211111133 358999998 9
Q ss_pred ccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcC---Ch-hHHHHHHHHHHHHHHHHHHHHhh
Q 045431 283 GVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPE---GF-KAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 283 G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~-~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
|+|+||++++++++ +.+.......+.+.+++.|.++.+.++.. .. ++++++.+.++++.+.+. ++
T Consensus 249 G~~ig~~~~~~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~---~~ 317 (389)
T PRK01278 249 GFPLGACLATEEAA--------KGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLV---DR 317 (389)
T ss_pred CcceEEEEEcHHHH--------hccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH---hh
Confidence 99999999998874 33433344455568899999987777521 11 223333333333333322 22
Q ss_pred cC-C-eeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhhC
Q 045431 359 LG-F-KVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 359 ~g-~-~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
+. + ....+ .|.++|+.++. +..++...++++ ||.+.|+. .+++||++ ..+++++++++++|+++++
T Consensus 318 ~~~~~~~v~g-~G~~~~i~~~~-~~~~~~~~l~~~-GV~~~p~~------~~~lR~~p~~~~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 318 FPDVIEEVRG-KGLLLGLKCVV-PNRDLVQALRDE-GLLTVGAG------DNVVRLLPPLIITEEEIDEALERLERAAE 387 (389)
T ss_pred CCCceeeEec-ccEEEEEEEec-CHHHHHHHHHHC-CeEEeecC------CCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 21 2 22333 67888888753 566777787776 99998863 47899994 5689999999999998763
No 142
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=3.5e-26 Score=218.90 Aligned_cols=316 Identities=13% Similarity=0.097 Sum_probs=208.0
Q ss_pred CCCCChHHHHHHHHHHHhhcccCCCCC---CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCC
Q 045431 73 TTEPIPEVITSALAKRSYALSTQEGYS---GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGS 148 (433)
Q Consensus 73 ~~~~~~~~~~~a~~~~~~~~~~~~~~~---~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~ 148 (433)
++.+..+.+.+++.+......+..... .+....-..++++.+++++ ++ +++++|+|+++++.+ +..++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 345677888888888764433211111 1111234678999999987 66 789999999999987 6778899
Q ss_pred CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----C-------CCccEEEEcCCCC
Q 045431 149 NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----V-------ARTDIIFFCSPNN 216 (433)
Q Consensus 149 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~i~l~~p~n 216 (433)
||+|++++++|.+....++..| .+++.++.+.++.+..+++. . ++++++++++|+|
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAG------------LNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcC------------CEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 9999999999888776777777 47888887654423333211 1 3688999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELL 296 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~ 296 (433)
|||...+ +++|.++|+++|+++|+|++|+.... +.+...+ +..++++|+||+++ ++.|+||++++++++
T Consensus 151 ~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~---~~~~~~~----~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~ 219 (361)
T cd06452 151 NYGNLHD---AKKIAKVCHEYGVPLLLNGAYTVGRM---PVSGKEL----GADFIVGSGHKSMA-ASAPIGVLATTEEWA 219 (361)
T ss_pred CCeeecc---HHHHHHHHHHcCCeEEEECCcccCCc---CCCHHHc----CCCEEEecCCcccc-CCCCeEEEEECHHHH
Confidence 9998765 78999999999999999999983211 2223222 23589999999997 667999999998775
Q ss_pred ccCCcchhHHHHHHHhh------cc--CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeec--
Q 045431 297 FSDGFPVAKDFNRIVCT------CF--NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYG-- 365 (433)
Q Consensus 297 ~~~~~~~~~~~~~~~~~------~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-- 365 (433)
+.+.+.... .. .......+.++.+.+.. ..++++...+ ..++++++.+.|+++ |+++..
T Consensus 220 --------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~-~~~~~~~l~~~L~~l~g~~v~~~~ 289 (361)
T cd06452 220 --------DIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPH-VKERVKRWDE-EVEKARWFVAELEKIEGIKQLGEK 289 (361)
T ss_pred --------HHHhccccccccceeeeeccccCchHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHhcCCCeEEECCC
Confidence 333322210 00 01111122222333321 0122333332 334557888999998 888762
Q ss_pred CCCccEEEEECCCC---------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee-ccChhHHHHHHHHHHHhhC
Q 045431 366 GKNAPYVWVQFPGR---------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA-FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 366 ~~~g~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~l~ 433 (433)
+...+++.++.+.. ...++.+.|++ +||.+.+ ....+++|++. ..++++++.+++.|+++++
T Consensus 290 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~-----~~~~~~~ri~~~g~~~e~~~~l~~al~~~~~ 361 (361)
T cd06452 290 PKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIK-----PGLTRYFKLSTYGLTWEQVEYVVDAFKEIAE 361 (361)
T ss_pred CCCCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEc-----CCCceEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 34556777776521 12246666655 4998532 22245899996 4599999999999998764
No 143
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=8.6e-27 Score=209.61 Aligned_cols=307 Identities=18% Similarity=0.272 Sum_probs=204.8
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH-HH-HH-HHhc----C--------CCCEEEEeCCCChh
Q 045431 98 YSGY-GAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD-IS-RL-QIVF----G--------SNVTMAVQDPSYPA 161 (433)
Q Consensus 98 ~~~Y-~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a-l~-~l-~~l~----~--------~gd~Vl~~~p~~~~ 161 (433)
..+| +...|++++|+-+|+.+ +++++||++..+++-. +. ++ .+++ . +.-+.+++.|+|..
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll----gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR 136 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL----GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR 136 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH----TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH
T ss_pred ccCCCCccCChHHHHHHHHHHh----CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH
Confidence 4589 88999999999999999 9999999988776644 33 23 3332 1 12367999999999
Q ss_pred hhhhHHHhCCcccccccccccceEEEeecCccCCcccC----C-CCCCCccEEEEcCC--CCccccCCCHHHHHHHHHH-
Q 045431 162 YVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD----L-STVARTDIIFFCSP--NNPTGAAATREQLTRLVQF- 233 (433)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~i~l~~p--~nPtG~~~~~~~~~~i~~~- 233 (433)
+..+++.+| ++++.+|+.+++ .+.+ + ...+.+|.|+ |.| +||||.+||.|..++++.+
T Consensus 137 HFai~E~~G------------iemi~VpM~~dG-PDmD~Ve~LV~~D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m~ 202 (425)
T PF12897_consen 137 HFAITEHFG------------IEMIPVPMTEDG-PDMDMVEELVAEDPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAMK 202 (425)
T ss_dssp HHHHHHHCT-------------EEEEEEEETTE-E-HHHHHHHTHTSTTEEEEE-E-SSS-TTT-----HHHHHHHHHS-
T ss_pred HHHHHHhhC------------cEEEecCCCCCC-CCHHHHHHHHhcCCccceEE-eCCCccCCCCccCCHHHHHHHhcCC
Confidence 999999999 588899987653 2222 2 2357889877 455 8999999999999999998
Q ss_pred HHHcCCEEEEecccccccc-CCCC----Ccccc---cCCCCcceEEEecccccccccccceeeeeccccccccCCcchhH
Q 045431 234 AKDNGSIIVYDSAYALYIS-DDNP----RSIFE---IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAK 305 (433)
Q Consensus 234 a~~~~~~li~De~~~~~~~-~~~~----~~~~~---~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 305 (433)
+...+..|+.|++|+-... +..+ ..+.+ -.+.+++++.+.|+||.. +||-+++|+.++...+ +
T Consensus 203 ~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl--------~ 273 (425)
T PF12897_consen 203 TAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANL--------A 273 (425)
T ss_dssp -SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHH--------H
T ss_pred cCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHH--------H
Confidence 3357999999999986443 2211 12332 246689999999999988 6999999999999886 7
Q ss_pred HHHHHHhhccCCCcHHHHHHHHHhcCcCC--h-hHHHHHHHHHHHHHHHHHHHHhhc-C-----CeeecCCCccEEEEEC
Q 045431 306 DFNRIVCTCFNGASNISQAGGLACLSPEG--F-KAVHEVIGFYKENTDIIVETFNSL-G-----FKVYGGKNAPYVWVQF 376 (433)
Q Consensus 306 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~-~~~~~~~~~~~~~~~~l~~~l~~~-g-----~~~~~~~~g~~~~~~~ 376 (433)
.+.+.....+.++..+.|..-.++|.+.. . .|+++.++.++-+.+.+.+.|++. | ..|..|.+|+|++++.
T Consensus 274 ~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~ 353 (425)
T PF12897_consen 274 WIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDV 353 (425)
T ss_dssp HHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEE
T ss_pred HHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEec
Confidence 78888888888899999999899998643 2 689999999999999888887653 3 4788999999999999
Q ss_pred CCCChHHHHHHHHHcCCeEecC-CCCCCC---CCCCeEEEee-ccChhHHHHHHHHHHHhh
Q 045431 377 PGRSSWDVFSEILEKTHVVTTP-GSGFGP---GGEGFIRVSA-FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 377 ~~~~~~~~~~~l~~~~gi~v~~-g~~f~~---~~~~~iRi~~-~~~~~~l~~~l~~l~~~l 432 (433)
....+.. ..+++++.||.+.| |..|.. ..+..|||+- +-+.+|++.+.+.+.-++
T Consensus 354 ~~G~Akr-vV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 354 LDGTAKR-VVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCV 413 (425)
T ss_dssp STT-HHH-HHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHH
T ss_pred CCChHHH-HHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHH
Confidence 8645544 45667788999999 777742 2356899995 568999999999887654
No 144
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=2.3e-26 Score=221.89 Aligned_cols=329 Identities=13% Similarity=0.159 Sum_probs=222.6
Q ss_pred CChHHHHHHHHHHHhhc-ccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC-CCCcEEEcCChHHHHHH-HHHh-----cC
Q 045431 76 PIPEVITSALAKRSYAL-STQEGYSGYGAEQGEKPLRAAIASTFYKDLGI-EEGDIFVSDGAKCDISR-LQIV-----FG 147 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~-~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~-~~~~i~~~~G~~~al~~-l~~l-----~~ 147 (433)
+.++.+.+++.+.+... .+......|+ ..+...+++++++++. .+++ ++++|++|+|+++++.+ +..+ ++
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~-~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~ 87 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYK-GINARDLDDIIITSCATESNNWVLKGVYFDEILK 87 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHH-HcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhccc
Confidence 46778999998888653 2222333453 4567889999888864 3444 68999999999999997 4443 24
Q ss_pred C-CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCCC
Q 045431 148 S-NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAAT 223 (433)
Q Consensus 148 ~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~~ 223 (433)
+ +++|++..+.|+++...+..+...+ .+++.++.++++.+..+ +++ .++++++++++|+||||.+++
T Consensus 88 ~~~~~vi~~~~e~ps~~~~~~~~~~~G---------~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 88 GGKNHIITTEVEHPAVRATCAFLESLG---------VEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred CCCCEEEEcCCccHHHHHHHHHHHHCC---------CEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC
Confidence 5 4789999888887766554332222 37888888654333222 222 357889999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
+++|.++|+++|+++++|++++... .+..+... +..+++.|++|++|.+| +|++++++.... .+.+
T Consensus 159 ---~~~I~~la~~~g~~~ivD~a~~~g~---~~~~~~~~----~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~--~p~~ 224 (382)
T TIGR03403 159 ---IKEIGEICKERGVLFHTDAVQAIGK---IPVDVQKA----GVDFLSFSAHKFHGPKG--VGGLYIRKGVEL--TPLF 224 (382)
T ss_pred ---HHHHHHHHHHcCCEEEEechhhcCC---CccCcccc----CCCEEEEcchhhCCCCc--eEEEEECCCCCC--CCcc
Confidence 6688888999999999999987321 12222221 12388899999988777 688887765421 0100
Q ss_pred hHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCC---ccEEEEECCCC
Q 045431 304 AKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKN---APYVWVQFPGR 379 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~~~~~~~~~~ 379 (433)
... .........+++.+.+.++.++++. ..+.++...+++++.++++.+.|+++ |+.+..+.. ..++.+.+++.
T Consensus 225 ~g~-~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (382)
T TIGR03403 225 HGG-EHMGGRRSGTLNVPYIVAMGEAMRL-ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV 302 (382)
T ss_pred cCC-CCCCCcccCCcChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC
Confidence 000 0000111244667777666666652 22346777889999999999999886 788776532 44667777766
Q ss_pred ChHHHHHHHHHcCCeEecCCCCCCCC-----------------CCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 380 SSWDVFSEILEKTHVVTTPGSGFGPG-----------------GEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 380 ~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+..++...| .++||.++.|..|... ..+.||+|+ +++++|++++++.|++++
T Consensus 303 ~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~ 373 (382)
T TIGR03403 303 EGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAV 373 (382)
T ss_pred CHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 777777665 4569999988766311 136799995 679999999999998765
No 145
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.95 E-value=2.1e-26 Score=224.96 Aligned_cols=344 Identities=10% Similarity=0.071 Sum_probs=218.6
Q ss_pred cCCCCceEEecCCC--CCCC-ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 59 KYPDAEVISLGIGD--TTEP-IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 59 ~~~~~~~i~l~~g~--~~~~-~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
..++...|||..|. ..+. .++.+.+++.+++... ..|....+..++...+++.+.+.++.++++|++++|+
T Consensus 32 d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sg 105 (413)
T cd00610 32 DVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL------THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSG 105 (413)
T ss_pred eCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC------cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcH
Confidence 34567899998863 2344 7889999999988542 2332222345555555555555446678899999999
Q ss_pred HHHHHHH-HHh--cCCCCEEEEeCCCChhhhhhHHHhCCcc-cccccccccceEEEeecCccC----CcccC---CC---
Q 045431 136 KCDISRL-QIV--FGSNVTMAVQDPSYPAYVDSSVIMGQTG-EFQKDAEKYGKIEYMRCTAEN----GFFPD---LS--- 201 (433)
Q Consensus 136 ~~al~~l-~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~--- 201 (433)
++++..+ ..+ ..++++|++.+++|++........+... ....+.....+++.++.+... .+..+ ++
T Consensus 106 sea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 185 (413)
T cd00610 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEAL 185 (413)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHH
Confidence 9999874 333 3678999999999998765554443211 000001111235556554210 01111 11
Q ss_pred -CC-CCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccc
Q 045431 202 -TV-ARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSK 277 (433)
Q Consensus 202 -~~-~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK 277 (433)
.. .++++ ++++| +|++|.++ +.+++++|.++|++||+++|+||+|+.+...+...........++ +.|+||
T Consensus 186 ~~~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d----~~t~sK 260 (413)
T cd00610 186 EEHPEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD----IVTLGK 260 (413)
T ss_pred hcCCCCEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCC----eEEEcc
Confidence 11 24444 44556 67779876 677899999999999999999999997644433222111211122 458999
Q ss_pred cccccccceeeeeccccccccCCcchhHHH--HHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHH
Q 045431 278 YAGFTGVRLGWTVIPKELLFSDGFPVAKDF--NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 278 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (433)
.++ +|+|+||++++++++ +.+ .......+.+.+++++.++.+.++.... ..+.++++++.+.+.+.
T Consensus 261 ~l~-~g~~~g~~~~~~~~~--------~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~ 328 (413)
T cd00610 261 GLG-GGLPLGAVLGREEIM--------DAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRER 328 (413)
T ss_pred ccc-CccccEEEEEcHHHH--------HhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Confidence 998 689999999988775 332 2233334556788888888777652111 34556677777777777
Q ss_pred Hhhc----CCeeecCCCccEEEEECCCC---------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhH
Q 045431 356 FNSL----GFKVYGGKNAPYVWVQFPGR---------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGN 420 (433)
Q Consensus 356 l~~~----g~~~~~~~~g~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~ 420 (433)
|++. ++.......|.++|+.++.. ....+...+. ++||.+.|+. .+++|+++ ..++++
T Consensus 329 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~------~~~lR~~~~~~~t~~~ 401 (413)
T cd00610 329 LRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG------GNVIRLLPPLIITEEE 401 (413)
T ss_pred HHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC------CCEEEEECCCcCCHHH
Confidence 7664 22221224678888888632 2344555555 4599999874 46799984 458999
Q ss_pred HHHHHHHHHHhh
Q 045431 421 VLEACKRFKHLY 432 (433)
Q Consensus 421 l~~~l~~l~~~l 432 (433)
+++++++|++++
T Consensus 402 i~~~~~~l~~~l 413 (413)
T cd00610 402 IDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHhC
Confidence 999999998864
No 146
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=8.3e-26 Score=215.33 Aligned_cols=341 Identities=19% Similarity=0.220 Sum_probs=247.9
Q ss_pred CCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCC----CCCHHHHHHHHHHHhccCCCCC-CcEEEcCChH
Q 045431 62 DAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAE----QGEKPLRAAIASTFYKDLGIEE-GDIFVSDGAK 136 (433)
Q Consensus 62 ~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~----~g~~~lr~~la~~l~~~~~~~~-~~i~~~~G~~ 136 (433)
+.+++.|..+.... .|..+.+++.+.+.++....+...|... .-+.+.|+.+++++ ++++ ++|++|.|+|
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~----~a~~~~eIvft~~tT 94 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL----NADSSDEIVFTRGTT 94 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCChh
Confidence 44578888877653 8999999999988765432332233222 25677888888887 8884 9999999999
Q ss_pred HHHHHH-HHh---cCCCCEEEEeCCCChhhhhhHHHhCCc-ccccccccccceEEEeecCccCCcccC-CCC--CCCccE
Q 045431 137 CDISRL-QIV---FGSNVTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDI 208 (433)
Q Consensus 137 ~al~~l-~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~ 208 (433)
++++++ .++ +.+||+|++.+-.|++....++.+..+ | .++..+|.++++.+..+ ++. .++||+
T Consensus 95 ~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~G---------a~v~~i~~~~~g~~~~~~~~~~i~~~Tkl 165 (405)
T COG0520 95 EALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTG---------AKVRVIPLDDDGLLDLDALEKLITPKTKL 165 (405)
T ss_pred HHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcC---------cEEEEEecCCCCCcCHHHHHHhcCCCceE
Confidence 999984 555 699999999999998877666665543 3 37899998855444433 222 478999
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccc-ccccccccee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSK-YAGFTGVRLG 287 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK-~~~~~G~r~G 287 (433)
|.+++-+|.||++.+ +++|+++|+++|+++++|.+++--.. +..+..+ +..+++.|.+| .+|..| +|
T Consensus 166 vais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~h~---~idv~~l----~~Df~afsgHKwl~gP~G--iG 233 (405)
T COG0520 166 VALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAAGHL---PIDVQEL----GCDFLAFSGHKWLLGPTG--IG 233 (405)
T ss_pred EEEECccccccccch---HHHHHHHHHHcCCEEEEECccccCcc---CCCchhc----CCCEEEEcccccccCCCc--eE
Confidence 999999999999988 89999999999999999999883211 3444443 34599999999 555335 89
Q ss_pred eeeccccccccCCc-----------------chhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHH
Q 045431 288 WTVIPKELLFSDGF-----------------PVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 288 ~l~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 350 (433)
+++++++++....+ .......++...+.+....+...++..+++..+ ++++.++.++..+
T Consensus 234 vLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig---~~~i~~~e~~L~~ 310 (405)
T COG0520 234 VLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG---MEAIEAHERELTE 310 (405)
T ss_pred EEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh---HHHHHHHHHHHHH
Confidence 99999998743111 011122333333333333444444455555443 5788888999999
Q ss_pred HHHHHHhhc-CCeeecCC---CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCC------CCCeEEEee--ccCh
Q 045431 351 IIVETFNSL-GFKVYGGK---NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPG------GEGFIRVSA--FGHR 418 (433)
Q Consensus 351 ~l~~~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~------~~~~iRi~~--~~~~ 418 (433)
++.+.|+++ ++.+..+. .+..+.+.+++....++...|.++ ||.++.|..|... -...+|+|+ |++.
T Consensus 311 ~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~ 389 (405)
T COG0520 311 YLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTE 389 (405)
T ss_pred HHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecCCH
Confidence 999999998 78887764 466788888887888888887766 8999999887532 134599994 7899
Q ss_pred hHHHHHHHHHHHhh
Q 045431 419 GNVLEACKRFKHLY 432 (433)
Q Consensus 419 ~~l~~~l~~l~~~l 432 (433)
+|++.+++.|+++.
T Consensus 390 edid~l~~aL~~~~ 403 (405)
T COG0520 390 EDVDRLLEALKKAL 403 (405)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 147
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=7.9e-26 Score=219.58 Aligned_cols=336 Identities=14% Similarity=0.148 Sum_probs=220.8
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCC--CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYS--GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
.++++|+.+++ .+..++++.+++.+++.+++...... .++...-..+|++.+|+++ +. +..+++++|+....
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~-~~~~~~~SG~~An~ 119 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH----GK-EAALLFTSGYVSNW 119 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh----CC-CcEEEeCCcHHHHH
Confidence 56899998876 46678999999999998764311111 1112223466777777776 53 45677777775433
Q ss_pred HHHHHhcC--CCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCC
Q 045431 140 SRLQIVFG--SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPN 215 (433)
Q Consensus 140 ~~l~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~ 215 (433)
.++..+.+ +||.|+.....|......+...|. ++..++..+...+...+.. .+++++|++++++
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~ 187 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEGIRHSRA------------EKRIFRHNDPADLERKLSDLDPHRPKLVAFESVY 187 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCC------------eEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCC
Confidence 34555554 788888888888887777776662 4555554321111111111 1356788888999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC-CcceEEEecccccccccccceeeeecccc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
||+|.+.+ +++|.++|++|++++|+||+|+...++.....+....+. ++..|+++||||.+|++| ||++++++
T Consensus 188 ~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~ 261 (406)
T PRK13393 188 SMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAA 261 (406)
T ss_pred CCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHH
Confidence 99999998 888889999999999999999843333222222222222 223577899999999878 99998887
Q ss_pred ccccCCcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEE
Q 045431 295 LLFSDGFPVAKDFNRIVCT--CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYV 372 (433)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~ 372 (433)
++ +.+...... ...+.+++.+.++.++++..... ...+.+++++++++.+.|++.|+.+..+ .++++
T Consensus 262 ~~--------~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~i~ 330 (406)
T PRK13393 262 LC--------DFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKAGIPHLPN-PSHIV 330 (406)
T ss_pred HH--------HHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCeE
Confidence 74 445443322 12345666677777777532111 2234667888999999999888876654 55566
Q ss_pred EEECCCC-ChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 373 WVQFPGR-SSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+.++.. ...++...+++++||.+.++.... +.+.+++||+. +.+++|+++++++|++++
T Consensus 331 ~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 331 PVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIW 394 (406)
T ss_pred EEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 6655431 335666677665699998865322 23457899995 569999999999998874
No 148
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=6.4e-26 Score=218.68 Aligned_cols=333 Identities=17% Similarity=0.178 Sum_probs=220.5
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC----CCCCHHHHHHHHHHHhccCCCC-CCcEEEcCChHHHHHH-
Q 045431 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA----EQGEKPLRAAIASTFYKDLGIE-EGDIFVSDGAKCDISR- 141 (433)
Q Consensus 68 l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~G~~~al~~- 141 (433)
|..+..++++|+.+.+++.+.+...........|.. ..+..++|+.+++++ +++ +++|++|+|+++++.+
T Consensus 3 ld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~~~~~v~~~~g~t~al~~~ 78 (376)
T TIGR01977 3 FDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAPSSAHVVFTNNATTALNIA 78 (376)
T ss_pred ccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHHHHHHHH
Confidence 455555677889999999998875421122223422 256678899999987 664 4589999999999987
Q ss_pred HHHhcCCCCEEEEeCCCChhhhhhHH----HhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCC
Q 045431 142 LQIVFGSNVTMAVQDPSYPAYVDSSV----IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSP 214 (433)
Q Consensus 142 l~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p 214 (433)
+.+++++||+|++.+++|+.+...+. ..| .+++.++.+.++..+.+ +++ .++++++++++|
T Consensus 79 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~ 146 (376)
T TIGR01977 79 LKGLLKEGDHVITTPMEHNSVARPLECLKEQIG------------VEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHA 146 (376)
T ss_pred HHhccCCCCEEEECcchhhHHHHHHHHHHHHcC------------cEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECC
Confidence 57778999999999999988754433 335 36777777643322221 221 357899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
+||||.+++ +++|.++|+++|+++|+|++++.... +..+.. .+..+++.|++|+++.| -.+|++++++.
T Consensus 147 ~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g~~---~~~~~~----~~~D~~~~s~~K~l~~p-~g~g~l~~~~~ 215 (376)
T TIGR01977 147 SNVTGTILP---IEEIGELAQENGIFFILDAAQTAGVI---PIDMTE----LAIDMLAFTGHKGLLGP-QGTGGLYIREG 215 (376)
T ss_pred CCCccccCC---HHHHHHHHHHcCCEEEEEhhhccCcc---CCCchh----cCCCEEEecccccccCC-CCceEEEEcCC
Confidence 999999999 67788899999999999999984221 222221 12348889999988533 23677766655
Q ss_pred ccccCCcc----h-h------HHH-HHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CC
Q 045431 295 LLFSDGFP----V-A------KDF-NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GF 361 (433)
Q Consensus 295 ~~~~~~~~----~-~------~~~-~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 361 (433)
........ . . ..+ .++.. .+.+.....+..++++......++.++++.++..+.+.+.|++. |+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~---~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~ 292 (376)
T TIGR01977 216 IKLKPLKSGGTGSHSALIDQPSELPDRFES---GTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKV 292 (376)
T ss_pred cCcCceecCCCccccccccccccchhhccC---CCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 41000000 0 0 000 11111 12333333333334432111234677788888999999999876 77
Q ss_pred eeecCC----CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC--------CCCCeEEEee--ccChhHHHHHHHH
Q 045431 362 KVYGGK----NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP--------GGEGFIRVSA--FGHRGNVLEACKR 427 (433)
Q Consensus 362 ~~~~~~----~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~--------~~~~~iRi~~--~~~~~~l~~~l~~ 427 (433)
.+..+. .+..+++.+++.+..++...|.+++||.+.+|..+.. ...+.||+++ +++++|++.++++
T Consensus 293 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~ 372 (376)
T TIGR01977 293 KIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEA 372 (376)
T ss_pred EEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHH
Confidence 776431 3567888888766667777766656999999886642 2457899995 5699999999999
Q ss_pred HHH
Q 045431 428 FKH 430 (433)
Q Consensus 428 l~~ 430 (433)
|++
T Consensus 373 l~~ 375 (376)
T TIGR01977 373 LSE 375 (376)
T ss_pred Hhh
Confidence 976
No 149
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=1.1e-25 Score=218.53 Aligned_cols=331 Identities=15% Similarity=0.172 Sum_probs=217.3
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCC----CHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQG----EKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
.+.|..+.+. ++|+.+.+++.+.+..... .....|....+ ..++|+.+++++ ++++++|++++|+++++.
T Consensus 18 ~~yl~~~~~~-~~p~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ia~~~----~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAGT-QIPQSVADAVSAALTRSNA-NRGGAYESSRRADQVVDDAREAVADLL----NADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCccC-CCCHHHHHHHHHHHHhcCC-CCCCCchHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEeCCHHHHHH
Confidence 6888877664 5788899999988864321 11123533333 357888888876 777778999999999987
Q ss_pred H-HHH---hcCCCCEEEEeCCCChhhhhh----HHHhCCcccccccccccceEEEeecCccCCcccC---CCC--CCCcc
Q 045431 141 R-LQI---VFGSNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD---LST--VARTD 207 (433)
Q Consensus 141 ~-l~~---l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~ 207 (433)
+ +.. .+++||+|++.+|+|++.... .+..| .+++.++.+.+++ ..+ +++ .++++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g------------~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~ 158 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAG------------AKVKWARVDEATG-ELHPDDLASLLSPRTR 158 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcC------------CEEEEEeccccCC-CcCHHHHHHhcCCCce
Confidence 5 333 368999999999999776433 34455 4777777764221 222 222 35789
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
+|++++|+||||.+++ +++|.++|++||+++|+|++++.. ..+..+... +..+++.|++|++| .|+|
T Consensus 159 lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~---~~~~~~~~~----~~d~~~~s~~K~~g---~~~G 225 (397)
T TIGR01976 159 LVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYAP---HGLIDVQAT----GADFLTCSAYKFFG---PHMG 225 (397)
T ss_pred EEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhcc---ccCCCHHHc----CCCEEEEechhhcC---CceE
Confidence 9999999999999987 888899999999999999998521 112222222 22367789999885 3589
Q ss_pred eeeccccccccCCcchh-----HHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-----------hHHHHHHHHHHHHHHH
Q 045431 288 WTVIPKELLFSDGFPVA-----KDFNRIVCTCFNGASNISQAGGLACLSPEGF-----------KAVHEVIGFYKENTDI 351 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~ 351 (433)
|++++++++..-.+... ....++...+.+.....+..++++.+...+. ..+++.+++..+.+++
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 99999887521110000 0001111111111122334445555543321 1256677778888889
Q ss_pred HHHHHhhc-CCeeecC----CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCC---------CCCCCeEEEee--c
Q 045431 352 IVETFNSL-GFKVYGG----KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFG---------PGGEGFIRVSA--F 415 (433)
Q Consensus 352 l~~~l~~~-g~~~~~~----~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~---------~~~~~~iRi~~--~ 415 (433)
+.+.|+++ ++.+..+ ..+.++.+.+++....++.+.|. ++||.+..|..|. +...++||+|+ +
T Consensus 306 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 384 (397)
T TIGR01976 306 LLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLA-DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHY 384 (397)
T ss_pred HHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHH-HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeecc
Confidence 99999887 4777654 24567777777655666776665 4599999886653 12346899996 5
Q ss_pred cChhHHHHHHHHH
Q 045431 416 GHRGNVLEACKRF 428 (433)
Q Consensus 416 ~~~~~l~~~l~~l 428 (433)
++++|++++++.|
T Consensus 385 ~t~~di~~l~~~l 397 (397)
T TIGR01976 385 NTAEEVDRLLEAL 397 (397)
T ss_pred CCHHHHHHHHHhC
Confidence 6899999998764
No 150
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.95 E-value=9.6e-26 Score=218.64 Aligned_cols=341 Identities=13% Similarity=0.083 Sum_probs=215.2
Q ss_pred HhcCCCCceEEecCCC---CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGD---TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....++..+|||..|. +--..+|.+.+++.+++.+... ..... . .+....+++.+.+..+ .+.+++++
T Consensus 34 ~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~---~~~~~---~-~~~~~~l~~~l~~~~~--~~~~~~~~ 104 (403)
T PRK05093 34 VWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH---ISNVF---T-NEPALRLAKKLIDATF--AERVFFAN 104 (403)
T ss_pred EEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc---ccCcc---C-CHHHHHHHHHHHhhCC--CCEEEEeC
Confidence 3445677899997762 2223789999999998875321 11110 1 1222344444433222 36888888
Q ss_pred ChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCccCCcccCCCCC
Q 045431 134 GAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV 203 (433)
Q Consensus 134 G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (433)
+++++......++ ...+.|+..+-+|++.......+ +........+....+++.++.++...+...+ .
T Consensus 105 sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l--~ 182 (403)
T PRK05093 105 SGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVI--D 182 (403)
T ss_pred chHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHh--c
Confidence 8888877532222 12356777887777754322222 2110000011111133444443211111111 1
Q ss_pred CCccEEEEcCCCCccccCC--CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc
Q 045431 204 ARTDIIFFCSPNNPTGAAA--TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF 281 (433)
Q Consensus 204 ~~~~~i~l~~p~nPtG~~~--~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~ 281 (433)
+++++|++ +|.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+.+.+.....-.+| +.||||.++
T Consensus 183 ~~~aaiii-ep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd----i~s~sK~l~- 256 (403)
T PRK05093 183 DHTCAVVV-EPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD----ILTSAKALG- 256 (403)
T ss_pred CCeEEEEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC----EEEeccccc-
Confidence 45666665 5988888765 889999999999999999999999998866664333222221233 569999998
Q ss_pred cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-
Q 045431 282 TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG- 360 (433)
Q Consensus 282 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g- 360 (433)
+|+|+||++++++++ +.+.......+.+.+++.|.++.+.|+.... .+..+.++++++++.+.|++++
T Consensus 257 ~G~rig~vv~~~~i~--------~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 325 (403)
T PRK05093 257 GGFPIGAMLTTAEIA--------SHFKVGTHGSTYGGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQ 325 (403)
T ss_pred CCcceEEEEEcHHHH--------hhcCCCCCCCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998885 3343323334556789999988887653211 3456788899999999998763
Q ss_pred ---CeeecCCCccEEEEECCCC---ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 361 ---FKVYGGKNAPYVWVQFPGR---SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 361 ---~~~~~~~~g~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+....+..|.++|+.++.. ...++...++++ ||.+.|+ +.+++|++ +..+++++++++++|++++
T Consensus 326 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l 398 (403)
T PRK05093 326 KYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVA------GPDVLRFAPSLVIEEADIDEGLARFEKAV 398 (403)
T ss_pred hCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 2222334688999998632 345677776665 9999874 24789996 4558999999999999875
No 151
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=1.8e-25 Score=213.93 Aligned_cols=319 Identities=13% Similarity=0.137 Sum_probs=206.6
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC--cEEEcCChHHHHHH-HHHhcCCCCE
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISR-LQIVFGSNVT 151 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~--~i~~~~G~~~al~~-l~~l~~~gd~ 151 (433)
..+++.+.+++..... .....|. .-..++|+.+++++ +++++ .|++++|+++++.. +..++.+||+
T Consensus 8 ~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~la~~~----~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~ 76 (355)
T TIGR03301 8 LSTSATVRDAMLVDWC-----HWDSEFN--DVTDQVRDRLLALA----GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGK 76 (355)
T ss_pred CCCCHHHHHHhhhhcc-----CCCHHHH--HHHHHHHHHHHHHh----cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCe
Confidence 3466777777666221 1112342 34567777777776 77654 57789999999987 5777888888
Q ss_pred EEEeCCCChh--hhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC----CCCccEEEEcCCCCccccCCCH
Q 045431 152 MAVQDPSYPA--YVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST----VARTDIIFFCSPNNPTGAAATR 224 (433)
Q Consensus 152 Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~i~l~~p~nPtG~~~~~ 224 (433)
|++.++.+.+ +...++..| .+++.++.+.+...+.+ +++ .++++++++++++||||+..+
T Consensus 77 vi~~~~~~~~~~~~~~a~~~g------------~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~- 143 (355)
T TIGR03301 77 LLVLINGAYGERLAKICEYLG------------IPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP- 143 (355)
T ss_pred EEEECCCchhhHHHHHHHHcC------------CceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH-
Confidence 7776665544 345556667 36777776543332222 221 245667778899999999887
Q ss_pred HHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc-cccccceeeeeccccccccCCc--
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA-GFTGVRLGWTVIPKELLFSDGF-- 301 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~-- 301 (433)
+++|+++|++|++++|+|++++.. ..+.++... +..++++|++|++ |++| +||++++++++..-..
T Consensus 144 --~~~i~~l~~~~~~~livD~~~s~g---~~~~~~~~~----~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~ 212 (355)
T TIGR03301 144 --LEAIAKVARSHGAVLIVDAMSSFG---AIPIDIEEL----DVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNA 212 (355)
T ss_pred --HHHHHHHHHHcCCEEEEEeccccC---Ccccchhhc----CccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCC
Confidence 789999999999999999987632 123333332 3348899999987 4445 7999999887521000
Q ss_pred -----chhHHHHHHH--hhccCCCcHHHHHHHHHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhcCCeeecC---CCcc
Q 045431 302 -----PVAKDFNRIV--CTCFNGASNISQAGGLACLSPEGFK-AVHEVIGFYKENTDIIVETFNSLGFKVYGG---KNAP 370 (433)
Q Consensus 302 -----~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~ 370 (433)
.....+.... .....+++...+.++.+++...... ++++..++++++++++.+.|+++|+.+..+ ..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~ 292 (355)
T TIGR03301 213 RSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI 292 (355)
T ss_pred CCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc
Confidence 0000000000 1112345666666555555421111 257777888999999999999888876543 2345
Q ss_pred EEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 371 YVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 371 ~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
++|+.++. .+..++...+. ++||.+.+|..+. .+++||++ +.+.++++++++.|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~l~-~~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 293 IVSFLYPDDPDFDFDDFYQELK-ERGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EEEEECCCCCcchHHHHHHHHH-HCCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 78898874 23345666654 5599999986543 26899996 348999999999998864
No 152
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=3.1e-25 Score=213.70 Aligned_cols=339 Identities=10% Similarity=0.066 Sum_probs=222.1
Q ss_pred hcCCCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCC
Q 045431 58 LKYPDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDG 134 (433)
Q Consensus 58 ~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G 134 (433)
...+++..+|+..|.. --..++.+.+++.+++.+.. . . ......+++..+++++.+..+ .+.++++++
T Consensus 24 ~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~---~---~-~~~~~~~~~~~la~~l~~~~~--~~~~~~~~s 94 (377)
T PRK02936 24 TDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW---H---V-SNLFTNSLQEEVASLLAENSA--GDLVFFCNS 94 (377)
T ss_pred EeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc---c---c-ccccCCHHHHHHHHHHHhcCC--CCEEEEeCC
Confidence 3456778999988862 22378999999999987532 1 1 123457899999999865322 358999999
Q ss_pred hHHHHHHHHHh---cCCCCEEEEeCCCChhhhhh-HHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEE
Q 045431 135 AKCDISRLQIV---FGSNVTMAVQDPSYPAYVDS-SVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIF 210 (433)
Q Consensus 135 ~~~al~~l~~l---~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 210 (433)
+++++.....+ ....++|++.+++|++.... ....+.......+......+..++.++...+...+ .+++++|+
T Consensus 95 G~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~ii 172 (377)
T PRK02936 95 GAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVM--NEEVAAVM 172 (377)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhc--cCCeEEEE
Confidence 99998863332 23346799999999865432 22222211100011111123334432211111111 24678877
Q ss_pred EcCCCCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeee
Q 045431 211 FCSPNNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 211 l~~p~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
+..+++++|.. .+++.+++|.++|++||+++|+||+|.++.+.+.+.+.......+| +.||||.++ +|+|+||+
T Consensus 173 ~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d----i~t~sK~l~-~G~~ig~v 247 (377)
T PRK02936 173 LEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD----IVTVAKGLG-NGIPVGAM 247 (377)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc----EEEEccccc-CCCccEEE
Confidence 77778998876 5889999999999999999999999998766654333222321233 237999998 99999999
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc--CCee---e
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL--GFKV---Y 364 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~---~ 364 (433)
++++++. +.+.......+.+.++++|.++.++++.... +...++++++.+.+.+.|++. ++.. .
T Consensus 248 ~~~~~~~--------~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 316 (377)
T PRK02936 248 IGKKELG--------TAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNI 316 (377)
T ss_pred EEcHHHH--------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE
Confidence 9998874 4443333334556799999999999874311 234466667777777777653 2222 2
Q ss_pred cCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 365 GGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 365 ~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
. ..|+++|+.++.. ...+... +.++||.+.|+ +.+++||+ +..+++++++++++|++++
T Consensus 317 ~-~~g~~~~i~~~~~-~~~~~~~-l~~~gv~v~~~------g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 317 R-GKGLMIGIECTEE-VAPVIEQ-LREEGLLVLSA------GPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred e-ecceEEEEEecch-HHHHHHH-HHHCCeEEecC------CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 2 3578999999742 4445554 45569999874 24789999 4679999999999998864
No 153
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=7e-26 Score=218.13 Aligned_cols=321 Identities=14% Similarity=0.145 Sum_probs=210.4
Q ss_pred CChHHHHHHHHHHHhhcccCC--CCCCCC--CCCCCHHHHHHHHHHHhccCCCC-CCcEEEcCChHHHHHH-HHHhcC--
Q 045431 76 PIPEVITSALAKRSYALSTQE--GYSGYG--AEQGEKPLRAAIASTFYKDLGIE-EGDIFVSDGAKCDISR-LQIVFG-- 147 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~--~~~~Y~--~~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~G~~~al~~-l~~l~~-- 147 (433)
++|+.+.+++.+.+....... +...++ ......++|+.+++++ +++ +++|++|+|+++++.+ +.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----NAPSPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCCCCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 467888889988875432101 111111 1234567888888887 776 7899999999999987 567766
Q ss_pred -CCCEEEEeCCCChhhhhh----HHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccc
Q 045431 148 -SNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTG 219 (433)
Q Consensus 148 -~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG 219 (433)
+||+|++++++|++.... .+..| .+++.++.+.++....+ +++ .+++++|++++|+||||
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG 153 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTG------------AKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLG 153 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcC------------cEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccC
Confidence 899999999999885433 23445 47788887643322222 221 35789999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 220 AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 220 ~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
.+++ +++|.++|++||++|++|++|+.... +.++... +..+++.|++|+++ + .++||++++++++..-
T Consensus 154 ~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~---~~~~~~~----~~d~~~~s~~K~~~-~-~g~g~~~~~~~~~~~~ 221 (373)
T cd06453 154 TINP---VKEIGEIAHEAGVPVLVDGAQSAGHM---PVDVQDL----GCDFLAFSGHKMLG-P-TGIGVLYGKEELLEEM 221 (373)
T ss_pred CcCC---HHHHHHHHHHcCCEEEEEhhhhcCce---eeecccc----CCCEEEeccccccC-C-CCcEEEEEchHHhhcC
Confidence 9998 67888889999999999999873221 2222222 12367789999997 3 5689999998875321
Q ss_pred CcchhH-----H----HHHHH----hhccCCCcHHHH---HHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCe
Q 045431 300 GFPVAK-----D----FNRIV----CTCFNGASNISQ---AGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFK 362 (433)
Q Consensus 300 ~~~~~~-----~----~~~~~----~~~~~~~~~~~q---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 362 (433)
.+.... . ..... ......++.... .+++..+...+ ++.++++.++.++++.+.|+++ +++
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g---~~~~~~~~~~~~~~l~~~l~~~~~~~ 298 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIG---MEAIAAHEHELTAYALERLSEIPGVR 298 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 110000 0 00000 000112333333 33334443333 4777788888899999999888 677
Q ss_pred eecC--CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEee--ccChhHHHHHHHHH
Q 045431 363 VYGG--KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSA--FGHRGNVLEACKRF 428 (433)
Q Consensus 363 ~~~~--~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~--~~~~~~l~~~l~~l 428 (433)
+..+ ..+.++++.+++.+..++.+.+.+ +||.+.+|..+.. ...+++|+++ +++.+|++++++.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 299 VYGDAEDRAGVVSFNLEGIHPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EeCCccccCCeEEEEECCcCHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 7642 235677888876566666666654 6999988875431 2257899997 46999999998864
No 154
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=2.7e-25 Score=213.65 Aligned_cols=332 Identities=13% Similarity=0.121 Sum_probs=221.3
Q ss_pred EEecCCCC-CCCChHHHHHHHHHHHhhcccCCC--CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH
Q 045431 66 ISLGIGDT-TEPIPEVITSALAKRSYALSTQEG--YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL 142 (433)
Q Consensus 66 i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l 142 (433)
++|+++++ .+...+.+.+++.+++.+++.... ...|+...+..+|++++|+++ +.+ +.+++++|.++.+.++
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g~e-~al~~~sG~~a~~~~i 75 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----GTE-SAILYSDGASTTSSTV 75 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----CCC-cEEEecCcHHHHHHHH
Confidence 36666665 466788999999999987543222 224777778999999999997 654 7899999999999888
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC---CC---------CCCCccEEE
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD---LS---------TVARTDIIF 210 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~i~ 210 (433)
..++++||.|+++++.|+++...+...+ .+++.++..+..++... +. ..+++++|+
T Consensus 76 ~~l~~~GD~Vl~~~~~h~s~~~~~~l~~------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi 143 (392)
T PLN03227 76 AAFAKRGDLLVVDRGVNEALLVGVSLSR------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLV 143 (392)
T ss_pred HHhCCCCCEEEEeccccHHHHHHHHHcC------------CeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEE
Confidence 8899999999999999999887776555 35555555422221111 11 113577788
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccc---cCCCCcceEEEecccccccccccce
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFE---IPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~---~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
+.+++||+|.+.+ +++|.++|++||+++|+||+|+ +...+. .....+ +....+..+++.|+||.+|.. .
T Consensus 144 ~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---g 216 (392)
T PLN03227 144 VEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---G 216 (392)
T ss_pred EcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---C
Confidence 7788999999999 7789999999999999999998 333221 112222 111123458888999987644 4
Q ss_pred eeeeccccccccCCcchhHHHHHHHhhccCCC--cHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeee
Q 045431 287 GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGA--SNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVY 364 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 364 (433)
|+++++++++ +.+.........+. +++.+.++.+.+..... .+++.++++++.+++.+.|++.++...
T Consensus 217 g~v~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~ 286 (392)
T PLN03227 217 GMTVGSEEVV--------DHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYA 286 (392)
T ss_pred cEEecCHHHH--------HHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 8888887764 33332222222223 35556666655542211 256778889999999999986543321
Q ss_pred ----------cCCCccEEEEECCCCC----------hHHHHHHHHHcCCeEecCCCC-----CCCCCCCeEEEee--ccC
Q 045431 365 ----------GGKNAPYVWVQFPGRS----------SWDVFSEILEKTHVVTTPGSG-----FGPGGEGFIRVSA--FGH 417 (433)
Q Consensus 365 ----------~~~~g~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~-----f~~~~~~~iRi~~--~~~ 417 (433)
....++.+.+.+.+.. ..++...+++ +|+.+.+... +..-.+..+|+++ ..+
T Consensus 287 ~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t 365 (392)
T PLN03227 287 LKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCLRVVANASHT 365 (392)
T ss_pred cccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceEEEEecCCCC
Confidence 1224566777775311 1245555554 5999865211 1112256799996 348
Q ss_pred hhHHHHHHHHHHHhh
Q 045431 418 RGNVLEACKRFKHLY 432 (433)
Q Consensus 418 ~~~l~~~l~~l~~~l 432 (433)
++|++++++.|++++
T Consensus 366 ~eei~~~~~~l~~~~ 380 (392)
T PLN03227 366 REDIDKLLTVLGEAV 380 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999875
No 155
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=2.5e-25 Score=213.26 Aligned_cols=296 Identities=11% Similarity=0.069 Sum_probs=200.2
Q ss_pred CHHHHHHHHHHHhccCCCCC--CcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhh--hhhHHHhCCcccccccccc
Q 045431 107 EKPLRAAIASTFYKDLGIEE--GDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAY--VDSSVIMGQTGEFQKDAEK 181 (433)
Q Consensus 107 ~~~lr~~la~~l~~~~~~~~--~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~ 181 (433)
..++|+.+++++ ++++ ++|++|+|+++++++ +.+++.+||.+++..+++++. ...++..|
T Consensus 37 ~~~~r~~la~l~----~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g----------- 101 (363)
T TIGR02326 37 VEQIRQQLLALA----TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLG----------- 101 (363)
T ss_pred HHHHHHHHHHHh----CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcC-----------
Confidence 455566677765 7765 379999999999997 577888998888877766554 34456666
Q ss_pred cceEEEeecCccCCcccC-CC----CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 182 YGKIEYMRCTAENGFFPD-LS----TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~-~~----~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.+++.++.+++.....+ ++ ..++++++.+++++||||+.++ +++|.++|++||+++|+|++++. +..+
T Consensus 102 -~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~---g~~~ 174 (363)
T TIGR02326 102 -IPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF---GGIP 174 (363)
T ss_pred -CceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc---cCcc
Confidence 47777777654333322 21 2245677888899999999998 78999999999999999998762 2224
Q ss_pred CcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch-------hHHHHHHH---hhccCCCcHHHHHHH
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV-------AKDFNRIV---CTCFNGASNISQAGG 326 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~q~~~ 326 (433)
.++..++ ..++++|++|+++ ++.++||++++++.+.+..... ...+.... .....+.+.+.+.++
T Consensus 175 ~~~~~~~----~D~~~~s~~K~l~-~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al 249 (363)
T TIGR02326 175 IDIAELH----IDYLISSANKCIQ-GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAF 249 (363)
T ss_pred cchhhcC----ccEEEecCccccc-cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence 4444432 2388899999884 3334899999988753211000 00011110 001123566666665
Q ss_pred HHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhcCCeeecC---CCccEEEEECCC---CChHHHHHHHHHcCCeEecCC
Q 045431 327 LACLSPEGFK-AVHEVIGFYKENTDIIVETFNSLGFKVYGG---KNAPYVWVQFPG---RSSWDVFSEILEKTHVVTTPG 399 (433)
Q Consensus 327 ~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g 399 (433)
.++++..... .+++.+++++++++++.+.|+++|+....+ ..+...|+.++. .+..++.+.+ +++||.+.||
T Consensus 250 ~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L-~~~gi~v~~g 328 (363)
T TIGR02326 250 AQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRL-KEQGFVIYPG 328 (363)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHH-HHCCEEEECC
Confidence 5555422111 256788999999999999999888877543 234567888874 3445666665 4559999999
Q ss_pred CCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhhC
Q 045431 400 SGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 400 ~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
..+ ..++||+++ +.+.+++++++++|++++.
T Consensus 329 ~~~---~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 329 KVS---QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred cCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 765 246899995 3589999999999998863
No 156
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1e-25 Score=218.95 Aligned_cols=337 Identities=12% Similarity=0.125 Sum_probs=217.6
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC--CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChH-HHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA--EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAK-CDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~-~al 139 (433)
..+++++.+.++++.|+.+.++..+. . .. ..+..|.+ ..|.+++++++++++.+.++++.++++++++++ ++.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~--~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~ 95 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-E-FY--TAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAE 95 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-c-Cc--ccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHH
Confidence 35799999999988888888776665 1 10 12222333 689999999999999987777776787777544 454
Q ss_pred HHH-HHhcCC--CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcC
Q 045431 140 SRL-QIVFGS--NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCS 213 (433)
Q Consensus 140 ~~l-~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~ 213 (433)
.++ ..++.+ ||+|++++|.|+.+...+..++.... .+++.++.+++.....+ +++ .+++++|++++
T Consensus 96 ~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g--------~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 96 AAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLG--------IEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred HHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCC--------cEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEEC
Confidence 444 445565 99999999999999888887773211 26677776543211111 222 35789999888
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccc----ccceeee
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT----GVRLGWT 289 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~----G~r~G~l 289 (433)
|+ |||.+. +.+++|.++|++||+++|+|+++...... ..... .+..++++|+||++ +| |+++||+
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~---~~~~~----~~~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL---KPPGE----YGADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC---CChHH----cCCCEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899983 45699999999999999999987642211 11111 12358999999998 45 7899999
Q ss_pred eccccccccCCcchh----------------H---HHHH---HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHH
Q 045431 290 VIPKELLFSDGFPVA----------------K---DFNR---IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKE 347 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~----------------~---~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 347 (433)
+++++++........ . ...+ .......+.....|.+ ...+.......++++++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a-~~~l~~~~~~g~~~~~~~~~~ 315 (398)
T cd00613 237 AVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMA-AMYIVYLGPEGLKEIAERAHL 315 (398)
T ss_pred EEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHH-HHHHHHhCHHHHHHHHHHHHH
Confidence 998877522100000 0 0000 0011111122333333 333332333457888999999
Q ss_pred HHHHHHHHHhhcCCeeecCCCccE--EEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhH
Q 045431 348 NTDIIVETFNSLGFKVYGGKNAPY--VWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGN 420 (433)
Q Consensus 348 ~~~~l~~~l~~~g~~~~~~~~g~~--~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~ 420 (433)
+++++.+.|++++.... +.+..+ ++++++. ....++...|++ +||.+.... +...+.+|++ ++++++|
T Consensus 316 ~~~~l~~~L~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~-~gi~~~~~~---~~~~~~lRis~~~~~t~ed 390 (398)
T cd00613 316 NANYLAKRLKEVGGVLP-FNGPFFHEFVLRLPPLYGIRAEDLAKALID-GGFHAPTMY---LPVDGTLMIEPTETETKEE 390 (398)
T ss_pred HHHHHHHHHHhcCCccc-CCCCeeEEEEEEcCCcchHHHHHHHHhhhh-cCccccccc---cCCCCeEEEEcCCCCCHHH
Confidence 99999999998754332 223322 5777763 234566666655 488764321 2345789999 4779999
Q ss_pred HHHHHHHH
Q 045431 421 VLEACKRF 428 (433)
Q Consensus 421 l~~~l~~l 428 (433)
++++++.|
T Consensus 391 id~~~~~L 398 (398)
T cd00613 391 LDALLEAL 398 (398)
T ss_pred HHHHHHhC
Confidence 99998864
No 157
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=2.7e-25 Score=214.90 Aligned_cols=325 Identities=12% Similarity=0.058 Sum_probs=221.3
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC-CcEEEcCChHHHHHH-HHHhcCCCCEE
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE-GDIFVSDGAKCDISR-LQIVFGSNVTM 152 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~-~~i~~~~G~~~al~~-l~~l~~~gd~V 152 (433)
...|+.+.+++.+.. ..| ...+..++++++.+.+.+.++++. +.+++++|+++++.+ +..++++||+|
T Consensus 18 ~~~~~~V~~a~~~~~---------~~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~V 87 (401)
T PLN02409 18 VNIPERVLRAMNRPN---------EDH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKV 87 (401)
T ss_pred CCCCHHHHHHhcCCC---------CCC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 356777777765422 112 234678888888888877667764 567888899999987 57788999999
Q ss_pred EEeCCCChhhh--hhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--C----CCccEEEEcCCCCccccCCC
Q 045431 153 AVQDPSYPAYV--DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--V----ARTDIIFFCSPNNPTGAAAT 223 (433)
Q Consensus 153 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~----~~~~~i~l~~p~nPtG~~~~ 223 (433)
++.+++|++.. ..++..| .+++.++.+.+..+..+ +++ . ++++++++++++||||.+++
T Consensus 88 lv~~~~~~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 88 VSFRIGQFSLLWIDQMQRLN------------FDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred EEeCCCchhHHHHHHHHHcC------------CceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 99999997653 4455556 47777777643332222 221 1 37899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCc--
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF-- 301 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~-- 301 (433)
.+++.++++ |+++|+++|+|++++.. ..+..+..+ +..+++.|.+|+++ .+.++||++++++.+.+-.+
T Consensus 156 ~~~i~~l~~-~~~~g~~~vvD~v~s~g---~~~id~~~~----~~D~~~~s~~K~l~-~P~G~G~l~~~~~~~~~~~~~~ 226 (401)
T PLN02409 156 LAGVRKLLD-CAQHPALLLVDGVSSIG---ALDFRMDEW----GVDVALTGSQKALS-LPTGLGIVCASPKALEASKTAK 226 (401)
T ss_pred HHHHHHHHh-hhccCcEEEEEcccccC---Ccccccccc----CccEEEEcCccccC-cCCCcceeEECHHHHHHHhcCC
Confidence 666666666 99999999999998731 112222222 23377778899996 43479999999887522000
Q ss_pred --chhHHH---HHHHhhc---cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCC----Cc
Q 045431 302 --PVAKDF---NRIVCTC---FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK----NA 369 (433)
Q Consensus 302 --~~~~~~---~~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g 369 (433)
...-.+ .+..... ..+++...+.++.++++......++++++++++.++.+.+.|++.|+++..+. ..
T Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~ 306 (401)
T PLN02409 227 SPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSD 306 (401)
T ss_pred CCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhccc
Confidence 000001 1111111 22455555555555555322245788899999999999999998888876542 22
Q ss_pred cEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 370 PYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 370 ~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
...|+.+| +.+..++...+++++||.+.+|.. ......|||+. +.+.+++..++.+|.++|
T Consensus 307 ~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~--~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 307 TVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLN--KVAGKVFRIGHLGNVNELQLLGALAGVEMVL 370 (401)
T ss_pred ceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCC--cccCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 45678876 556677878888888999998864 32357899995 558999999999998875
No 158
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.94 E-value=3.2e-25 Score=214.50 Aligned_cols=347 Identities=10% Similarity=0.029 Sum_probs=219.7
Q ss_pred HHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..+|+..|... + ..+|.+.+++.+++.+... ...+.......+|.+.++++. + .+.
T Consensus 29 ~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~----~--~~~ 99 (396)
T PRK04073 29 AEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL---TSRAFHSDQLGPWYEKVAKLT----G--KDM 99 (396)
T ss_pred eeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhcC----C--CCe
Confidence 33444455667789999766432 2 3679999999999876431 111112222344555555442 3 368
Q ss_pred EEEcCChHHHHHHHHHhc----------CCC-CEEEEeCCCChhhh-hhHHHhCCcccccccccccceEEEeecCccCCc
Q 045431 129 IFVSDGAKCDISRLQIVF----------GSN-VTMAVQDPSYPAYV-DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF 196 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l~----------~~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (433)
+++++++++|+.....+. ++| ++|+..+-+|++.. ......+.......++.....+..++.++.+.+
T Consensus 100 ~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 179 (396)
T PRK04073 100 VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEAL 179 (396)
T ss_pred EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHH
Confidence 999999998887532221 134 67888877777654 333333321111111111222334444321111
Q ss_pred ccCCCCCCCccEEEEcCCCCccccCCCHH-HHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecc
Q 045431 197 FPDLSTVARTDIIFFCSPNNPTGAAATRE-QLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSF 275 (433)
Q Consensus 197 ~~~~~~~~~~~~i~l~~p~nPtG~~~~~~-~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 275 (433)
...+ .+++++|+++.++||||.+++.+ .+++|.++|++||+++|+||+|.++...+...........+| +.+|
T Consensus 180 ~~~i--~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd----i~~~ 253 (396)
T PRK04073 180 KAAI--TPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD----MYIL 253 (396)
T ss_pred HHhc--ccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC----EEEe
Confidence 1111 24677777777799999998764 699999999999999999999998765543222111111122 3368
Q ss_pred cccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHH
Q 045431 276 SKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 276 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (433)
||.+|.+|+|+||++++++++ +.+.......+.+.+++++.++.+.|+.... +...++.+++++++.+.
T Consensus 254 sK~lg~gg~~ig~~~~~~~i~--------~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~ 322 (396)
T PRK04073 254 GKALGGGVFPISCVAANRDIL--------GVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQ 322 (396)
T ss_pred cccccCCCCcceEEEEcHHHH--------hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence 999997789999999998875 4443333444556789999999988863211 23446667778888888
Q ss_pred HhhcC---CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHH
Q 045431 356 FNSLG---FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKH 430 (433)
Q Consensus 356 l~~~g---~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~ 430 (433)
|++++ +....+ .|++++++++. ...++...+++ +||.+.+. +++++||+ +..+++++++++++|++
T Consensus 323 L~~l~~~~i~~~~~-~g~~~~~~~~~-~~~~~~~~l~~-~Gv~~~~~------~~~~iRi~p~l~~t~e~i~~~~~~l~~ 393 (396)
T PRK04073 323 LKEIDNPMIKEVRG-RGLFIGVELNE-PARPYCEALKE-EGLLCKET------HETVIRFAPPLVITKEELDWAFEKIKA 393 (396)
T ss_pred HHhhcCCcccceec-ceEEEEEEecc-hHHHHHHHHHH-CCeEEecC------CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 88763 222333 57788888863 45566666655 59999753 24689999 57799999999999998
Q ss_pred hhC
Q 045431 431 LYK 433 (433)
Q Consensus 431 ~l~ 433 (433)
++.
T Consensus 394 ~l~ 396 (396)
T PRK04073 394 VLS 396 (396)
T ss_pred HhC
Confidence 863
No 159
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=2.4e-24 Score=207.61 Aligned_cols=324 Identities=13% Similarity=0.094 Sum_probs=212.0
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCC---CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEG---YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
+.|++..-.-.-|+++.+.+++.+......+... ...+.......++|+.+|+++ ++ +++++++|+++++.
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~--~~~~~~~g~t~a~~ 92 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM--DEARVTHGAREGKF 92 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHH
Confidence 4677654443457889999999998854432111 222333446899999999997 65 46888999999998
Q ss_pred H-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeec--CccCCcccC-CCC---------CCCcc
Q 045431 141 R-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRC--TAENGFFPD-LST---------VARTD 207 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~---------~~~~~ 207 (433)
+ +..++++||+|+++.++|.+....++..| .+++.++. +.+..+..+ +++ .++++
T Consensus 93 ~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G------------~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 160 (387)
T PRK09331 93 AVMHSLCKKGDYVVLDGLAHYTSYVAAERAG------------LNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPA 160 (387)
T ss_pred HHHHHhcCCCCEEEECCCchHHHHHHHHHcC------------CEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCE
Confidence 7 67888999999999999988877777777 47788877 332222221 111 13689
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
+|++++|+||||...+ +++|.++|++||+++|+|++|+.... +.+.... +..++++|++|+++ ++.++|
T Consensus 161 lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~---~~~~~~~----g~D~~~~s~~K~l~-~~~~~G 229 (387)
T PRK09331 161 LALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRM---PVDGKKL----GADFIVGSGHKSMA-ASAPSG 229 (387)
T ss_pred EEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCc---CCCHHHc----CCCEEEeeCccccc-CCCCEE
Confidence 9999999999998776 88999999999999999999984211 2333222 23488999999997 667899
Q ss_pred eeeccccccccCCcchhHHHHHHHhh--------ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 288 WTVIPKELLFSDGFPVAKDFNRIVCT--------CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
|++++++++ +.+.+.... ...+.......++.+.+.. ..+.++ ..++..++.+++.+.|+++
T Consensus 230 ~l~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~-~~~~~~-~~~~~~~~~~~l~~~L~~l 299 (387)
T PRK09331 230 VLATTEEYA--------DKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH-VVERVK-RWDEEVKKARWFVDELEKI 299 (387)
T ss_pred EEEECHHHH--------hhcccccCCCcccceeeeceecCchHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhcC
Confidence 999998875 222111000 0001111111112222221 011222 3445567778899999999
Q ss_pred -CCeeec--CCCccEEEEECCCC---------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee-ccChhHHHHHHH
Q 045431 360 -GFKVYG--GKNAPYVWVQFPGR---------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA-FGHRGNVLEACK 426 (433)
Q Consensus 360 -g~~~~~--~~~g~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~-~~~~~~l~~~l~ 426 (433)
|+++.. +....++.++.+.. ...++.+.| +++||...+ ......+|+.. ..+.++++.+++
T Consensus 300 ~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~-----~~~~~i~ri~~~g~t~~di~~l~~ 373 (387)
T PRK09331 300 EGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIK-----PGATKEFKLSTYGLTWEQVEYVAD 373 (387)
T ss_pred CCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEc-----cCCceEEEEEeccCCHHHHHHHHH
Confidence 988873 23455666665522 113355555 456998432 12245677775 459999999999
Q ss_pred HHHHhh
Q 045431 427 RFKHLY 432 (433)
Q Consensus 427 ~l~~~l 432 (433)
.|++++
T Consensus 374 aL~~i~ 379 (387)
T PRK09331 374 AFKEIA 379 (387)
T ss_pred HHHHHH
Confidence 999875
No 160
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.94 E-value=3.9e-24 Score=208.33 Aligned_cols=352 Identities=9% Similarity=0.048 Sum_probs=215.4
Q ss_pred HHHHhcCCCCceEEecCCCCCC---CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC-CcE
Q 045431 54 AAHMLKYPDAEVISLGIGDTTE---PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE-GDI 129 (433)
Q Consensus 54 ~~~~~~~~~~~~i~l~~g~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~-~~i 129 (433)
+......+++..+|+..|.... ..++.+.+++.+++.+.. . .+.+..+.+. ..++|+++....+.+. +.+
T Consensus 32 G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~----~-~~~~~~~~~~-~~~la~~l~~~~~~~~~~~~ 105 (425)
T PRK08088 32 NCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS----H-TCFQVLAYEP-YLELCEKMNQKVPGDFAKKT 105 (425)
T ss_pred eCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC----C-ccccccCCHH-HHHHHHHHHHhCCCCCCCEE
Confidence 3334455677899998775433 258999999999987532 1 1111122333 3477777765223221 345
Q ss_pred EEcCChHHHHH----HHHHhcCCCCEEEEeCCCChhhhhhHHHhCCccc-c-cccccccceEEE--eecCccCCccc---
Q 045431 130 FVSDGAKCDIS----RLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGE-F-QKDAEKYGKIEY--MRCTAENGFFP--- 198 (433)
Q Consensus 130 ~~~~G~~~al~----~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~--~~~~~~~~~~~--- 198 (433)
++++++++++. ++....++ ..|+..+++|++........+.... + ...+.....+.. +|.+.. +...
T Consensus 106 ~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~ 183 (425)
T PRK08088 106 LLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDA 183 (425)
T ss_pred EEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHH
Confidence 44444445444 33333344 4566669999998766665543110 0 000000011111 222111 1100
Q ss_pred --CCCC-------CCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcc
Q 045431 199 --DLST-------VARTDIIFFC-SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEV 268 (433)
Q Consensus 199 --~~~~-------~~~~~~i~l~-~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 268 (433)
+++. ..++.++++. ..++++....+.+.+++|.++|++||+++|+||+|.++.+.+.+.++... +.
T Consensus 184 ~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~----~~ 259 (425)
T PRK08088 184 IASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQM----GV 259 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhc----CC
Confidence 0111 1345555543 33788778889999999999999999999999999986555433222122 22
Q ss_pred eEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHH
Q 045431 269 AIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKE 347 (433)
Q Consensus 269 vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~ 347 (433)
+..+.||||.++ +|+|+||++++++++ +.+.......+.+.+++.|.++.++++.... ++++++++..+.
T Consensus 260 ~pdi~s~sK~l~-~G~rig~v~~~~~~~--------~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 330 (425)
T PRK08088 260 AADLTTFAKSIA-GGFPLAGVTGRAEVM--------DAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEK 330 (425)
T ss_pred CCCEEEEecccc-CCCcceeeEecHHHH--------hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 345789999998 999999999998885 4444444555667899999999999985433 456666666555
Q ss_pred HHHHHHHHHhhcCC-eeecCCCccEEEEECCC-C--------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec--
Q 045431 348 NTDIIVETFNSLGF-KVYGGKNAPYVWVQFPG-R--------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF-- 415 (433)
Q Consensus 348 ~~~~l~~~l~~~g~-~~~~~~~g~~~~~~~~~-~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-- 415 (433)
.++.+.+.+..++. ....+ .|+++|+.+.. . ....+...+++ .||.+.|+..| .+.+||++.
T Consensus 331 ~~~~l~~l~~~~~~~~~v~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~----~~~iRl~~~~~ 404 (425)
T PRK08088 331 LKDGLLAIAEKHPEIGDVRG-LGAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPY----YNVLRILVPLT 404 (425)
T ss_pred HHHHHHHHHHhCCCeEEEec-cceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCC----CCEEEEECCCC
Confidence 55555555555532 22222 28899999831 1 13445555554 59988876544 368999964
Q ss_pred cChhHHHHHHHHHHHhh
Q 045431 416 GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 416 ~~~~~l~~~l~~l~~~l 432 (433)
.+++++++++++|++++
T Consensus 405 ~t~~ei~~~i~~l~~~l 421 (425)
T PRK08088 405 IEDAQIRQGLEIIAQCF 421 (425)
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 47999999999999876
No 161
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=2.3e-24 Score=207.93 Aligned_cols=325 Identities=15% Similarity=0.149 Sum_probs=208.0
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCC--C--CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhc---C
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYG--A--EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVF---G 147 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~--~--~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~---~ 147 (433)
+.|+.+.+++.+.+..... .....+. . ..-..++|+.+++++ ++++++|++|+|+++++.+ +..++ .
T Consensus 10 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~i~~t~~~t~a~~~al~~~~~~~~ 84 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFG-NPSSMHSFGGEVGKAVEEAREQVAKLL----GAEPDEIIFTSGGTESDNTAIKSALAAQP 84 (379)
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCcHHHHHHHHHHHHHHhcC
Confidence 5778899999887753211 1111110 0 112456667777776 8888999999999999986 44443 5
Q ss_pred CCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCCCH
Q 045431 148 SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAATR 224 (433)
Q Consensus 148 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~~~ 224 (433)
+||+|++...+|+++...+..+...+ .+++.++.+.++....+ +++ .++++++++++++||||.+++
T Consensus 85 ~~~~vv~~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~- 154 (379)
T TIGR03402 85 EKRHIITTAVEHPAVLSLCQHLEKQG---------YKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFP- 154 (379)
T ss_pred CCCeEEEcccccHHHHHHHHHHHHcC---------CEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc-
Confidence 67899999999988766555442222 37778877644322222 221 357889999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchh
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVA 304 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 304 (433)
+++|.++|+++|+++++|++++.. ..+..+... +..+++.|.+|.+|.+| +|++++++.... .+...
T Consensus 155 --~~~I~~l~~~~g~~vivD~~~~~g---~~~~~~~~~----~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~--~p~~~ 221 (379)
T TIGR03402 155 --IEEIGEIAKERGALFHTDAVQAVG---KIPIDLKEM----NIDMLSLSGHKLHGPKG--VGALYIRKGTRF--RPLLR 221 (379)
T ss_pred --HHHHHHHHHHcCCEEEEECccccc---ccccCcccC----CCCEEEEcHHHcCCCCc--eEEEEECCCCCC--CCccc
Confidence 568899999999999999999831 113333322 22377888899776556 888888766521 11110
Q ss_pred HHH-HHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh-c-CCeeecCCC---ccEEEEECCC
Q 045431 305 KDF-NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS-L-GFKVYGGKN---APYVWVQFPG 378 (433)
Q Consensus 305 ~~~-~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~---g~~~~~~~~~ 378 (433)
... .... ...+.+.....++.++++. ..+++++..++.++.++.+.+.|.+ . ++.+..+.. ...+.+.+++
T Consensus 222 g~~~~~~~--~~gt~~~~~~~~l~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR03402 222 GGHQERGR--RAGTENVPGIVGLGKAAEL-ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY 298 (379)
T ss_pred CCccCCCc--CCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC
Confidence 000 0001 1122333333333344431 1235677778888999999999885 5 666654321 1123233344
Q ss_pred CChHHHHHHHHHcCCeEecCCCCCCCCC-----------------CCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 379 RSSWDVFSEILEKTHVVTTPGSGFGPGG-----------------EGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 379 ~~~~~~~~~l~~~~gi~v~~g~~f~~~~-----------------~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+..++...| +++||.+.+|..|.... .+.+|+|+ +++++|++++++.|++++
T Consensus 299 ~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~ 370 (379)
T TIGR03402 299 IEGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPII 370 (379)
T ss_pred CCHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 4556666654 56699999998875331 36899995 679999999999998875
No 162
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=1.4e-24 Score=208.69 Aligned_cols=319 Identities=13% Similarity=0.090 Sum_probs=202.9
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC--CcEEEcCChHHHHHH-HHHhcCCCCE
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE--GDIFVSDGAKCDISR-LQIVFGSNVT 151 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~--~~i~~~~G~~~al~~-l~~l~~~gd~ 151 (433)
.++++.+.+++.+... .....|. .-..++|+.+++++ ++++ +.|++++|+++++.. +.+++.+||.
T Consensus 14 ~~~~~~~~~a~~~~~~-----~~~~~~~--~~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~ 82 (368)
T PRK13479 14 LTTSRTVREAMLRDWG-----SWDDDFN--ALTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGK 82 (368)
T ss_pred CCCCHHHHHHhCCCCC-----CCChHHH--HHHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhccCCCCe
Confidence 3456666666555321 1111232 24567777777776 6654 568899999999997 6788899999
Q ss_pred EEEeCCCChhhh--hhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC----CCCccEEEEcCCCCccccCCCH
Q 045431 152 MAVQDPSYPAYV--DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST----VARTDIIFFCSPNNPTGAAATR 224 (433)
Q Consensus 152 Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~i~l~~p~nPtG~~~~~ 224 (433)
|++++++|++.. ..++..| .+++.++.+.+..++.+ +++ .++++++++++|+||||...+
T Consensus 83 vlv~~~~~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~- 149 (368)
T PRK13479 83 VLVPDNGAYGARIAQIAEYLG------------IAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP- 149 (368)
T ss_pred EEEEeCCchHHHHHHHHHHcC------------CcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC-
Confidence 999988887653 5556666 47777887643333222 221 245678899999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc-cccccceeeeeccccccccCCcc-
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA-GFTGVRLGWTVIPKELLFSDGFP- 302 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~-~~~G~r~G~l~~~~~~~~~~~~~- 302 (433)
+++|.++|+++|+++|+|++++ +. ..+.++...+ ..++++|++|++ |++| +||++++++.+......
T Consensus 150 --~~~i~~l~~~~~~~livDa~~~-~g--~~~~~~~~~~----~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~ 218 (368)
T PRK13479 150 --LDEIAAVAKRHGKRLIVDAMSS-FG--AIPIDIAELG----IDALISSANKCIEGVPG--FGFVIARRSELEACKGNS 218 (368)
T ss_pred --HHHHHHHHHHcCCEEEEEcccc-cC--CccccccccC----ceEEEecCccccccCCC--ceEEEECHHHHHHhhcCC
Confidence 6788899999999999997664 32 2233343331 237778999976 5566 79999998875210000
Q ss_pred ---hhHHHHHHH-----hhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCC---Ccc
Q 045431 303 ---VAKDFNRIV-----CTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSLGFKVYGGK---NAP 370 (433)
Q Consensus 303 ---~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~ 370 (433)
..+...... .....+++...+.++.+++..... .++++..++++++++.+.+.|+++|+.+..+. ...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 298 (368)
T PRK13479 219 RSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPI 298 (368)
T ss_pred CCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCce
Confidence 000000000 011123444444444444331111 13567778999999999999999988765332 112
Q ss_pred EEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 371 YVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 371 ~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+.+.++. .+..++...+.++ ||.+.+|..+ ..+++|++. +.++++++.+++.|++++
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~-gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 299 IVTFHAPADPAYDFKEFYERLKEQ-GFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred EEEEECCCCCCcCHHHHHHHHHHC-CEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 23333332 3556677776655 9999988643 246899985 348999999999999875
No 163
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1e-23 Score=202.73 Aligned_cols=344 Identities=10% Similarity=0.069 Sum_probs=221.3
Q ss_pred HHHHhcCCCCceEEecCCC--CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC-cEE
Q 045431 54 AAHMLKYPDAEVISLGIGD--TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG-DIF 130 (433)
Q Consensus 54 ~~~~~~~~~~~~i~l~~g~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~-~i~ 130 (433)
+......++...||+..|. ..+...|.+.+++.+++.... .+ +..-..++++++++.+. ..++ .++
T Consensus 20 G~~l~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~------~~-~~~~~~~~~~~la~~l~----~~~~~~~~ 88 (375)
T PRK04260 20 GNYLIDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW------HS-PNLYLNSLQEEVAQKLI----GDKDYLAF 88 (375)
T ss_pred eCEEEeCCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcC------cc-cCccCCHHHHHHHHHHh----cCcCCEEE
Confidence 3334445677899997763 234557789999999886531 11 12234678889998763 2234 357
Q ss_pred EcCChHHHHHH-HHHh--cCCCCEEEEeCCCChhhh-hhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCc
Q 045431 131 VSDGAKCDISR-LQIV--FGSNVTMAVQDPSYPAYV-DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVART 206 (433)
Q Consensus 131 ~~~G~~~al~~-l~~l--~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (433)
++++++++... +... ...+++|++.+.+|++.. ......+....-..++.....+...+.++...+...+ .+++
T Consensus 89 ~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l--~~~~ 166 (375)
T PRK04260 89 FCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALV--NKNT 166 (375)
T ss_pred EcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhc--CCCe
Confidence 88888888875 3222 355678999888887643 3333333211100111111111111111100111111 1456
Q ss_pred cEEEEcCCCCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccc
Q 045431 207 DIIFFCSPNNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVR 285 (433)
Q Consensus 207 ~~i~l~~p~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r 285 (433)
.+|++..++|++|+.. +.+.++++.++|+++|+++|+||+|.++...+.+.+.......+| +.||||.++ +|+|
T Consensus 167 a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd----i~t~sK~l~-~G~~ 241 (375)
T PRK04260 167 AAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD----IFTLAKGLA-NGVP 241 (375)
T ss_pred EEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC----EEEeccccc-CCcc
Confidence 6777778899999875 467899999999999999999999987755543332212222234 348999998 8999
Q ss_pred eeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhcC-Cee
Q 045431 286 LGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSLG-FKV 363 (433)
Q Consensus 286 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g-~~~ 363 (433)
+||+++++++. +.+.......+.+.+++.+.++.++++.... .++++.++..+..++.+.+.+.+++ +..
T Consensus 242 ig~~~~~~~~~--------~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 313 (375)
T PRK04260 242 VGAMLAKSSLG--------GAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTT 313 (375)
T ss_pred eEEEEEcHHHH--------hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeE
Confidence 99999998874 4443333344556789999999999864332 4567777777777777777777664 333
Q ss_pred ecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 364 YGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.. ..|+++|++++. ...++..++.+ +||.+.|+ +.+.+|++. ..+++++++++++|++++
T Consensus 314 ~~-~~g~~~~~~~~~-~~~~~~~~l~~-~Gi~v~~~------~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 314 VR-GLGYMIGIETTA-DLSQLVEAARD-KGLIVLTA------GTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred Ee-ccceEEEEEecC-cHHHHHHHHHh-CCCEEecC------CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 33 378999999843 45566666555 59999764 247799996 348999999999998764
No 164
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=6.8e-24 Score=205.28 Aligned_cols=224 Identities=14% Similarity=0.118 Sum_probs=163.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHH----HhCCc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSV----IMGQT 172 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~ 172 (433)
+..|+ ......|++.||++. + .+++++++|+++++.+ +..++++||+|++++|+|+.+...+. ..|
T Consensus 77 y~R~~-~Pt~~~Le~~lA~le----g--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G-- 147 (427)
T PRK07049 77 YSRFN-HPNSEIVEDRLAVYE----G--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG-- 147 (427)
T ss_pred ccCCC-CcCHHHHHHHHHHHh----C--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC--
Confidence 34564 455689999999986 4 3468888888888887 67889999999999999999876643 345
Q ss_pred ccccccccccceEEEeecCcc-CCcccCCC---CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHH---cCCEEEEec
Q 045431 173 GEFQKDAEKYGKIEYMRCTAE-NGFFPDLS---TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKD---NGSIIVYDS 245 (433)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~---~~~~li~De 245 (433)
.+++.++...+ ..+...+. ..+++++|++++|+||||.+++.+++.+|++.|.+ +++++|+||
T Consensus 148 ----------i~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDe 217 (427)
T PRK07049 148 ----------VGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDN 217 (427)
T ss_pred ----------cEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEEC
Confidence 24444442211 11111111 12578999999999999999999999999888654 789999999
Q ss_pred cccccccCCCCCcccccCCCCcceEEEeccccccc-ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHH
Q 045431 246 AYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG-FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQA 324 (433)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 324 (433)
+|...... .++ .. +..|++.|+||.+| .+|+|+||++++++++ +.+...........+++.|.
T Consensus 218 ty~~~~~~---~pl-~~----g~divv~S~SK~~gG~~glr~G~vv~~~~l~--------~~l~~~~~~~g~~ls~~~a~ 281 (427)
T PRK07049 218 TLLGPVFQ---KPL-EH----GADLSVYSLTKYVGGHSDLVAGAVLGRKALI--------RQVRALRSAIGTQLDPHSCW 281 (427)
T ss_pred CccccccC---Ccc-cc----CCCEEEEcCceeecCCCCcEEEEEECCHHHH--------HHHHHHHHhcCCCCCHHHHH
Confidence 98754321 122 11 23588889999998 6899999999988774 66666665555668888888
Q ss_pred HHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CC
Q 045431 325 GGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GF 361 (433)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 361 (433)
++.+.++ .+..+.++..++++.+.+.|+++ ++
T Consensus 282 l~~r~L~-----tl~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 282 MLGRSLE-----TLVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred HHHcCCC-----hHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8777775 23555566689999999999987 54
No 165
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=9.2e-24 Score=203.61 Aligned_cols=220 Identities=16% Similarity=0.154 Sum_probs=160.0
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHH-----HhCCcccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSV-----IMGQTGEFQK 177 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~-----~~g~~~~~~~ 177 (433)
..-..+|++.+|++. +. +.+++++|+++++.+ +.+++++||+|+++.|.|+.+...+. ..|
T Consensus 75 ~Pt~~~LE~~lA~l~----g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G------- 141 (418)
T PLN02242 75 NPTVLNLGRQMAALE----GT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCN------- 141 (418)
T ss_pred ChhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccC-------
Confidence 556788999999986 44 466788999999986 67889999999999999988876553 233
Q ss_pred cccccceEEEeecCccCCcccCCCCCC-CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 178 DAEKYGKIEYMRCTAENGFFPDLSTVA-RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.+++.++.++...+...+ .+ ++++|++++|+||||.+++ +++|+++|++||++||+|++|..+.+. +
T Consensus 142 -----~~~~~~d~~d~e~l~~~i--~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~--~ 209 (418)
T PLN02242 142 -----ITTTFVDITDLEAVKKAV--VPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLS--P 209 (418)
T ss_pred -----ceEEEcCCCCHHHHHHhc--CcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCC--H
Confidence 255555543211111111 24 5899999999999999886 889999999999999999999865442 1
Q ss_pred CcccccCCCCcceEEEecccccccccccc-eeeeeccccccccCCcchhHHHHHHHh--hccCCCcHHHHHHHHHhcCcC
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTGVR-LGWTVIPKELLFSDGFPVAKDFNRIVC--TCFNGASNISQAGGLACLSPE 333 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G~r-~G~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~q~~~~~~l~~~ 333 (433)
..+ +..|++.||||.++.+|.+ .||++++++++ +.+.+... ....+.+...|.++..+...
T Consensus 210 ---~~~----g~divv~S~SK~l~g~g~~~gG~iv~~~~li--------~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l- 273 (418)
T PLN02242 210 ---ARL----GADVVVHSISKFISGGADIIAGAVCGPAELV--------NSMMDLHHGALMLLGPTMNPKVAFELSERL- 273 (418)
T ss_pred ---HHc----CCcEEEEeCccccCCCCCceEEEEEcCHHHH--------HHHHHHhhhhhhccCCCCCHHHHHHHHcCC-
Confidence 122 2358899999999878887 59999988875 45554433 12344566667766666542
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecC
Q 045431 334 GFKAVHEVIGFYKENTDIIVETFNSLGFKVYGG 366 (433)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 366 (433)
..+..+.++++++++.+.+.|+++++.+..|
T Consensus 274 --~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP 304 (418)
T PLN02242 274 --PHLSLRMKEHCRRAMEYAKRMKELGLKVIYP 304 (418)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHhCCCEEECC
Confidence 2446677899999999999999987776543
No 166
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.93 E-value=7.9e-24 Score=208.31 Aligned_cols=337 Identities=15% Similarity=0.162 Sum_probs=216.2
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHH---hccCCCCCCcEEEcCChHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTF---YKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l---~~~~~~~~~~i~~~~G~~~al~ 140 (433)
.++.++.|.++...|..+.+++...-. . ..+..|.+ .-...++++++++. .+.++++++++++|+|+++++.
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~-~---~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~ 143 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEF-Y---TAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAE 143 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhH-H---HhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHH
Confidence 578899999888778777665543311 0 11222222 22344666666443 5556888889999999999998
Q ss_pred H-HHHh-cCCCCEEEEeCCCChhhhhhHHHhCC-cccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCC
Q 045431 141 R-LQIV-FGSNVTMAVQDPSYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSP 214 (433)
Q Consensus 141 ~-l~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p 214 (433)
+ +.++ +.+||+|++.++.|+.+...+..++. .| .+++.++.+++ ..+.+ +++ .+++++|++++|
T Consensus 144 ~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G---------~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p 213 (447)
T PRK00451 144 AALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQG---------IEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP 213 (447)
T ss_pred HHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCC---------cEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC
Confidence 7 4555 47999999999999998877765311 11 47888887653 22222 221 367899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEE--eccccccccCCCCCcccccCCCCcceEEEe---cccccccccccceeee
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVY--DSAYALYISDDNPRSIFEIPGAKEVAIETS---SFSKYAGFTGVRLGWT 289 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~vi~i~---S~sK~~~~~G~r~G~l 289 (433)
||||.+.+ +++|.++|+++|+++++ |.+.... ..... ..+..++++ +|||.++++|+++||+
T Consensus 214 -n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~-----~~~~~----~~~~D~~~~s~~k~~~~~~~~Gpg~G~l 280 (447)
T PRK00451 214 -NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGL-----LKPPG----EYGADIVVGEGQPLGIPLSFGGPYLGFF 280 (447)
T ss_pred -CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhcc-----CCCcc----cCCCCEEEECCCcCCCCCCCCCCCchHH
Confidence 89999876 88999999999999988 4332111 11111 122336555 6777777889999999
Q ss_pred eccccccccCCcch-------------------h-HHHHHHHhhccCCCcHHHH-HHHHHhcCcCChhHHHHHHHHHHHH
Q 045431 290 VIPKELLFSDGFPV-------------------A-KDFNRIVCTCFNGASNISQ-AGGLACLSPEGFKAVHEVIGFYKEN 348 (433)
Q Consensus 290 ~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~ 348 (433)
+++++++......+ . ..+++.......+.+...| .++..++...+...+++.++++.++
T Consensus 281 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~ 360 (447)
T PRK00451 281 ATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQK 360 (447)
T ss_pred HhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99888763210000 0 0011111122222222233 2333233322335678999999999
Q ss_pred HHHHHHHHhhc-CCeeecCCCccEEE--EECCCCChHHHHHHHHHcCCeE-ecCCCCCCCCCCCeEEEee--ccChhHHH
Q 045431 349 TDIIVETFNSL-GFKVYGGKNAPYVW--VQFPGRSSWDVFSEILEKTHVV-TTPGSGFGPGGEGFIRVSA--FGHRGNVL 422 (433)
Q Consensus 349 ~~~l~~~l~~~-g~~~~~~~~g~~~~--~~~~~~~~~~~~~~l~~~~gi~-v~~g~~f~~~~~~~iRi~~--~~~~~~l~ 422 (433)
++++.+.|+++ |+.+. .+++|.+ ++++ ....++.++|.++ ||. ..++..|.+...+++|+++ ++++++++
T Consensus 361 ~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~-~~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~ 436 (447)
T PRK00451 361 AHYLAERLAEIGGVELF--DGPFFNEFVVRLP-KPAEEVNEALLEK-GILGGYDLGRYYPELGNHLLVCVTEKRTKEDID 436 (447)
T ss_pred HHHHHHHHhhcCCEEec--CCCeEEEEEEecC-CCHHHHHHHHHhc-CCCCCcccccccCCcCCEEEEecCCCCCHHHHH
Confidence 99999999988 67765 3444433 5554 3567788887766 665 3456655544457899997 57899999
Q ss_pred HHHHHHHHhh
Q 045431 423 EACKRFKHLY 432 (433)
Q Consensus 423 ~~l~~l~~~l 432 (433)
++++.|++++
T Consensus 437 ~l~~~L~~~~ 446 (447)
T PRK00451 437 ALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 167
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.93 E-value=6.4e-24 Score=207.37 Aligned_cols=350 Identities=12% Similarity=0.080 Sum_probs=222.6
Q ss_pred HHHHHHhcCCCCceEEecCCCCCC---CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTTE---PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
..+......+++..+|+..|.... ..++.+.+++.+++.+.. ..+.+..+..+|+++|++++ +. .++
T Consensus 37 ~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-----~~~~~~~~~~~lae~l~~~~----~~-~~~ 106 (423)
T TIGR00713 37 GKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-----SYGAPTEAEILLAKEIISRV----PS-VEM 106 (423)
T ss_pred ccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC-----cCCCCCHHHHHHHHHHHHhC----Cc-ccE
Confidence 344444556778899998886542 478999999999997521 11224568899999999986 22 368
Q ss_pred EEEcCChHHHHHHHHH---hcCCCCEEEEeCCCChhhhhhHHHhCCccc---ccccccc-----cceEEEeecCccCCcc
Q 045431 129 IFVSDGAKCDISRLQI---VFGSNVTMAVQDPSYPAYVDSSVIMGQTGE---FQKDAEK-----YGKIEYMRCTAENGFF 197 (433)
Q Consensus 129 i~~~~G~~~al~~l~~---l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~ 197 (433)
|++++|+++++..... .....++|+..+++|++...........+. ....... ......++.++...+.
T Consensus 107 v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 186 (423)
T TIGR00713 107 VRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALE 186 (423)
T ss_pred EEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHH
Confidence 9999999999986322 234568999999999997544332111110 0000000 0112233322111111
Q ss_pred cCCCC-CCCccEEEEc-CCCCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEec
Q 045431 198 PDLST-VARTDIIFFC-SPNNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSS 274 (433)
Q Consensus 198 ~~~~~-~~~~~~i~l~-~p~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 274 (433)
..+.. ..++++|++. .|+| +|.+++ ++.+++|.++|++||+++|+||+|.++..+.. .....+...+| +.+
T Consensus 187 ~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~-~~~~~~~~~pD----i~t 260 (423)
T TIGR00713 187 EVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG-GAQEYFGVEPD----LTT 260 (423)
T ss_pred HHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc-hhHHHhCCCcc----hhh
Confidence 00111 1467788875 7788 798887 68999999999999999999999988744221 11111221233 237
Q ss_pred ccccccccccceeeeeccccccccCCcchhHHHHH---HHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHH
Q 045431 275 FSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNR---IVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTD 350 (433)
Q Consensus 275 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 350 (433)
|||.++ +|+|+||++++++++ +.+.. ....++.+.++++++++.+.++.... ..+++.++..+..++
T Consensus 261 ~sK~l~-~G~pig~v~~~~~i~--------~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~ 331 (423)
T TIGR00713 261 LGKIIG-GGLPVGAFGGRREIM--------ERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAE 331 (423)
T ss_pred hhhhhc-CCCceeeeeEHHHHH--------HhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 999998 999999999998875 43431 22334556899999988888763221 245677777777777
Q ss_pred HHHHHHhhcCCeee-cCCCccE-EEEECCCC---------Ch---HHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc
Q 045431 351 IIVETFNSLGFKVY-GGKNAPY-VWVQFPGR---------SS---WDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG 416 (433)
Q Consensus 351 ~l~~~l~~~g~~~~-~~~~g~~-~~~~~~~~---------~~---~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~ 416 (433)
.+.+.++++++... .+.++++ +++..+.. +. ..+...+++ +||.+.++ .| +.+|++...
T Consensus 332 ~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~-~~-----~~~~l~~~~ 404 (423)
T TIGR00713 332 GLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPS-QF-----EACFLSAAH 404 (423)
T ss_pred HHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecC-Cc-----cceeeECCC
Confidence 78777877765542 2233332 33432211 11 135556665 69998654 22 357888878
Q ss_pred ChhHHHHHHHHHHHhhC
Q 045431 417 HRGNVLEACKRFKHLYK 433 (433)
Q Consensus 417 ~~~~l~~~l~~l~~~l~ 433 (433)
+++++++++++|.++++
T Consensus 405 t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 405 TEEDIENTIEAAEEVFA 421 (423)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999998763
No 168
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.93 E-value=1.9e-23 Score=202.38 Aligned_cols=344 Identities=12% Similarity=0.096 Sum_probs=217.9
Q ss_pred HHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEE
Q 045431 54 AAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIF 130 (433)
Q Consensus 54 ~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~ 130 (433)
+......+++..||+..|.. .+ ..+|.+.+++.+++.+... . ...|. .....+|.+.+++.. ..+.++
T Consensus 30 G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~-~-~~~~~-~~~~~~la~~l~~~~------~~~~v~ 100 (406)
T PRK12381 30 GSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH-T-GNGYT-NEPVLRLAKKLIDAT------FADRVF 100 (406)
T ss_pred cCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc-c-cCccC-CHHHHHHHHHHHhhC------CCCeEE
Confidence 33344456778999977532 12 2578999999999875321 1 11231 222344555555442 347999
Q ss_pred EcCChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhHHHhCCccccc-ccccccceEEEeecCccCCcccCC
Q 045431 131 VSDGAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQ-KDAEKYGKIEYMRCTAENGFFPDL 200 (433)
Q Consensus 131 ~~~G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (433)
+++++++|+.....+. ....+|+..+.+|++.......++....+. .++.....+..++.++...+...+
T Consensus 101 ~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 180 (406)
T PRK12381 101 FCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALI 180 (406)
T ss_pred EcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhc
Confidence 9999999988632222 245789999999988765444433221111 011111122333332111111111
Q ss_pred CCCCCccEEEEcCCCCccccCC--CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccc
Q 045431 201 STVARTDIIFFCSPNNPTGAAA--TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKY 278 (433)
Q Consensus 201 ~~~~~~~~i~l~~p~nPtG~~~--~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~ 278 (433)
.+++.+|++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.+.+.......-.+| +.||||.
T Consensus 181 --~~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD----i~t~sK~ 253 (406)
T PRK12381 181 --DDQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----VLTTAKA 253 (406)
T ss_pred --cCCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC----EEEehhh
Confidence 135666665 8999998655 789999999999999999999999987766554332222221233 3599999
Q ss_pred ccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh
Q 045431 279 AGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 279 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
++ +|+|+||++++++++ +.+.......+.+.+++.+.++.+.++... -++++++++++.+++.+.|++
T Consensus 254 l~-gG~~ig~~~~~~~~~--------~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~ 321 (406)
T PRK12381 254 LG-GGFPIGAMLTTEKCA--------SVMTVGTHGTTYGGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNT 321 (406)
T ss_pred hh-CCCceEEEEEcHHHH--------hhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHH
Confidence 98 999999999998875 444333334455678999998888775321 145678888889999888887
Q ss_pred cC--Cee-e-cCCCccEEEEECCCC---ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHH
Q 045431 359 LG--FKV-Y-GGKNAPYVWVQFPGR---SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFK 429 (433)
Q Consensus 359 ~g--~~~-~-~~~~g~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 429 (433)
++ ..+ . ....|.++|+.++.. ....+... +.++||.+.+. +++.+||++ ..+++++++++++|.
T Consensus 322 l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~-l~~~Gv~v~~~------g~~~lRl~p~~~~t~~~i~~~~~~l~ 394 (406)
T PRK12381 322 INARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQE-AAKAGVMVLIA------GPNVVRFAPALNISEEEITTGLDRFA 394 (406)
T ss_pred HHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHH-HHHCCcEEeeC------CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 63 221 1 123578889988642 22344444 55569999753 246899985 468999999999998
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
+++
T Consensus 395 ~~l 397 (406)
T PRK12381 395 RAC 397 (406)
T ss_pred HHH
Confidence 875
No 169
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.93 E-value=4.3e-24 Score=203.55 Aligned_cols=299 Identities=14% Similarity=0.167 Sum_probs=205.6
Q ss_pred ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC--CCcEEEcCChHHHHHH-HHHhcC------
Q 045431 77 IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--EGDIFVSDGAKCDISR-LQIVFG------ 147 (433)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~--~~~i~~~~G~~~al~~-l~~l~~------ 147 (433)
++..+.+.+...+. .....|+...+..++++++++|+.+.++++ ++++++|+|+++++.+ +..+..
T Consensus 11 ~~~~~~~~~~~~~n-----~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~ 85 (345)
T cd06450 11 PPALLLEMLTSAKN-----AIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRL 85 (345)
T ss_pred HHHHHHHHHHHhcC-----CCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhh
Confidence 34445555555543 233458888899999999999998855653 5689999999999886 444431
Q ss_pred ------CC--CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CC------CccEEE
Q 045431 148 ------SN--VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VA------RTDIIF 210 (433)
Q Consensus 148 ------~g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~------~~~~i~ 210 (433)
++ +.|++++++|..+...+..+| .+++.++.++++..+.+ +++ .+ ++++++
T Consensus 86 ~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~ 153 (345)
T cd06450 86 KAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD------------VKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVV 153 (345)
T ss_pred hcccccccCCeEEEEcCcchhHHHHHHHHHh------------cCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEE
Confidence 33 478889999999888888777 47788887654332222 221 12 677888
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEEEecccccccccccceeee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
+++|+||||.+.+ +++|.++|+++|+++++|++|+.+..... .... .....+...+..|++|+++ ++.++|++
T Consensus 154 ~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~l~-~p~g~g~~ 227 (345)
T cd06450 154 ATAGTTDTGAIDP---LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKYGL-VPLGCSAV 227 (345)
T ss_pred EecccCCCCCCCC---HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHhhC-CCcchHHH
Confidence 8899999999866 88999999999999999999987654321 1111 1111222356779999885 77889987
Q ss_pred eccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCC
Q 045431 290 VIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKN 368 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~ 368 (433)
+++ .+.+.++..++.. ..+++..++..+.++++.+.|+++ ++.+..+..
T Consensus 228 ~~~---------------------------~~~~~~~l~~l~~---~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 277 (345)
T cd06450 228 LVR---------------------------ALKLWATLRRFGR---DGYGEHIDRIVDLAKYLAELIRADPGFELLGEPN 277 (345)
T ss_pred HHH---------------------------HHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc
Confidence 654 3344444555542 345777888889999999999887 777665445
Q ss_pred ccEEEEECCC-----CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec--c-ChhHHHHHHHHHHHh
Q 045431 369 APYVWVQFPG-----RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF--G-HRGNVLEACKRFKHL 431 (433)
Q Consensus 369 g~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~-~~~~l~~~l~~l~~~ 431 (433)
+.++.+.+++ ....++.+.+. ++|+.+.++..+. .++++|+++. . +.++++++++.|+++
T Consensus 278 ~~iv~f~~~~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 278 LSLVCFRLKPSVKLDELNYDLSDRLN-ERGGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred eeEEEEEECCcchhhHHHHHHHHHHH-hcCCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 5566666654 23456666665 4466555554443 4578999963 3 789999999999763
No 170
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.92 E-value=4.8e-23 Score=200.09 Aligned_cols=341 Identities=12% Similarity=0.053 Sum_probs=214.6
Q ss_pred HhcCCCCceEEecCCCCCCC---ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGDTTEP---IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....+++..+|+..|..... .++.+.+++.+++.+... ...+.......+|.+.++++. + .+.+++++
T Consensus 35 ~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~----~--~~~~~~~~ 105 (401)
T PRK00854 35 VWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTL---TSRAFRNDQLAPLYEELAALT----G--SHKVLPMN 105 (401)
T ss_pred EEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhC----C--CCEEEEeC
Confidence 34456678899877754333 488999999999986532 111112334556667776653 3 35888888
Q ss_pred ChHHHHHH-HHHhc---------CCC-CEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccCCcccCCC
Q 045431 134 GAKCDISR-LQIVF---------GSN-VTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAENGFFPDLS 201 (433)
Q Consensus 134 G~~~al~~-l~~l~---------~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (433)
++++|+.. +..+. .+| ++|++.+-+|++........+..... ..++....++..++..+...+...+
T Consensus 106 SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i- 184 (401)
T PRK00854 106 SGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAI- 184 (401)
T ss_pred CcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHh-
Confidence 88888886 43332 123 67888887776654333333321110 0011111234444433211111111
Q ss_pred CCCCccEEEEcCCCCccccCCCH-HHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc
Q 045431 202 TVARTDIIFFCSPNNPTGAAATR-EQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 202 ~~~~~~~i~l~~p~nPtG~~~~~-~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
.+++++|++++|+||+|.+++. +++++|.++|++||+++|+||+|.++.+.+...........+|.++ ++|.++
T Consensus 185 -~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~----~~K~l~ 259 (401)
T PRK00854 185 -TPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL----IGKALS 259 (401)
T ss_pred -CCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE----eccccc
Confidence 2578899999999999999974 5699999999999999999999987655443211111111234222 479997
Q ss_pred ccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 281 FTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 281 ~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.| +|+||++++++++ +.+.......+.+.+++.+.++.+.|+.... +...+.++++.+++.+.|+++
T Consensus 260 -gg~~~ig~v~~~~~~~--------~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 260 -GGFYPVSAVLSNSEVL--------GVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred -CCccCeEEEEEcHHHH--------hcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhh
Confidence 56 7999999998875 3333222333455788999988888863211 335678888889999999887
Q ss_pred CCee---ecCCCccEEEEEC-CC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 360 GFKV---YGGKNAPYVWVQF-PG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 360 g~~~---~~~~~g~~~~~~~-~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+... ..+ .|.++.+.+ +. ....++.+.|+++ ||.+.+. +.+++|++. ..+++++++++++|++++
T Consensus 328 ~~~~~~~~~g-~g~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 328 RSNIVREVRG-RGLMLAVELEPEAGGARQYCEALKER-GLLAKDT------HDHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred ccCceEEEec-cceEEEEEEecCchhHHHHHHHHHHC-CeEEecC------CCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 4322 233 344444444 32 3455677776655 9999642 246899994 679999999999999876
No 171
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.92 E-value=3.8e-23 Score=189.71 Aligned_cols=336 Identities=16% Similarity=0.218 Sum_probs=235.8
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhc-ccCCCCCCCCC--CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYAL-STQEGYSGYGA--EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR- 141 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~Y~~--~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~- 141 (433)
|-|+.+.. -|+.+++.+++...+... ++..+.+.|+. .....+-|+.+|+.+ ++++++|++|+|++++.++
T Consensus 3 iYlD~~AT-Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll----ga~~~eIiFTSG~TEsnNla 77 (386)
T COG1104 3 IYLDNAAT-TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL----GADPEEIIFTSGATESNNLA 77 (386)
T ss_pred cccccccc-CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh----CCCCCeEEEecCCcHHHHHH
Confidence 44444443 367789999999988766 55566666653 345677788888887 9999999999999999996
Q ss_pred HHHh--c----CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEc
Q 045431 142 LQIV--F----GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFC 212 (433)
Q Consensus 142 l~~l--~----~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~ 212 (433)
|... . +.|.+|++..-.|+.+.+.++.+..+| .++.+++++.++-..++ +++ .+++.+|.++
T Consensus 78 I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g---------~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim 148 (386)
T COG1104 78 IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQG---------FEVTYLPVDSNGLVDLEQLEEALRPDTILVSIM 148 (386)
T ss_pred HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcC---------CeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEE
Confidence 5542 2 257899999999999999999884334 48999999886544443 222 3678888888
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
..||-||++.| +++|.++|+++++++.+|.+++. +.-|..+..+. -.+..-|-+|..|..| +|+++.+
T Consensus 149 ~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~---Gkipi~~~~~~----vD~ls~SaHK~~GpkG--iGaLyv~ 216 (386)
T COG1104 149 HANNETGTIQP---IAEIGEICKERGILFHVDAVQAV---GKIPIDLEELG----VDLLSFSAHKFGGPKG--IGALYVR 216 (386)
T ss_pred ecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc---CceeccccccC----cceEEeehhhccCCCc--eEEEEEC
Confidence 99999999988 88899999999999999999883 11144444332 1255667799999778 8999886
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc--CCeeecC---C
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL--GFKVYGG---K 367 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~~---~ 367 (433)
+..... .+..--.+.......+.+.+...+...+++ ...+.++....++...++++.+.|.+. ++.+.+. .
T Consensus 217 ~~~~~~---p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r 292 (386)
T COG1104 217 PGVRLE---PLIHGGGQERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR 292 (386)
T ss_pred CCCccC---ceeccCcCCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC
Confidence 655210 000000011111122234444444455554 233456778888999999999999875 4444432 2
Q ss_pred CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCC-----------------CCCeEEEee--ccChhHHHHHHHHH
Q 045431 368 NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPG-----------------GEGFIRVSA--FGHRGNVLEACKRF 428 (433)
Q Consensus 368 ~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~--~~~~~~l~~~l~~l 428 (433)
-...+.+.+++...+.+... ++.+||.+..|+.|... ..+.+|||| .++++|++.+++.|
T Consensus 293 lP~~~~~~f~gv~gE~ll~~-L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l 371 (386)
T COG1104 293 LPNILNFSFPGVEGESLLLA-LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEAL 371 (386)
T ss_pred CCCeEEEEeCCCcHHHHHHh-ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHH
Confidence 23567788888777666555 45669999999999632 136799998 45899999999999
Q ss_pred HHhh
Q 045431 429 KHLY 432 (433)
Q Consensus 429 ~~~l 432 (433)
++++
T Consensus 372 ~~~i 375 (386)
T COG1104 372 KEII 375 (386)
T ss_pred HHHH
Confidence 8875
No 172
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=3.6e-23 Score=200.69 Aligned_cols=335 Identities=14% Similarity=0.138 Sum_probs=212.1
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCC----CCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGY----GAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y----~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
+.|+.+... +.|+.+.+++.+.+...........+ .......++|+.+++++ ++++++|++|+|+++++.+
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~v~~~~g~t~a~~~ 79 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI----GADSREIVFTSGATESNNL 79 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCCHHHHHHH
Confidence 566666654 67888999988877432110110011 11134566788888886 8888999999999999986
Q ss_pred -HHHh----cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcC
Q 045431 142 -LQIV----FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCS 213 (433)
Q Consensus 142 -l~~l----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~ 213 (433)
+..+ .++||+|++..++|+.+...+..+...+ .+++.++.++++.++.+ +++ .++++++++++
T Consensus 80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~ 150 (402)
T TIGR02006 80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREG---------FEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMH 150 (402)
T ss_pred HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEEC
Confidence 4443 3689999999999998776655442222 37778877644322222 222 25788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
++||||.+.+ +++|.++|+++|+++++|++++.... +..+... +..+++.|++|.+|.+| +|++++++
T Consensus 151 ~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~---~~~~~~~----~~D~~~~s~~K~~gp~G--~G~l~~~~ 218 (402)
T TIGR02006 151 VNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGKI---PINVNEL----KVDLMSISGHKIYGPKG--IGALYVRR 218 (402)
T ss_pred CCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCCc---ccCcccc----CCCEEEEehhhhcCCCc--eEEEEEcc
Confidence 9999999988 77889999999999999999973211 2223222 22378889999887446 89998887
Q ss_pred cccccCCcchhH-HHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCC--Cc
Q 045431 294 ELLFSDGFPVAK-DFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGK--NA 369 (433)
Q Consensus 294 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~--~g 369 (433)
+......+.... ...+ .....+.+.....+..++++.. ..+++...+++++.++.+.+.|+++ ++.+..+. ..
T Consensus 219 ~~~~~~~~~~~g~~~~~--~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~ 295 (402)
T TIGR02006 219 KPRVRLEALIHGGGHER--GMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRV 295 (402)
T ss_pred CCCCCCCceecCCCccC--CccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 653211110000 0000 0111223333333333444311 1346777888999999999999876 66654321 11
Q ss_pred c-EEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCC-----------------CCCeEEEee--ccChhHHHHHHHHHH
Q 045431 370 P-YVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPG-----------------GEGFIRVSA--FGHRGNVLEACKRFK 429 (433)
Q Consensus 370 ~-~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~--~~~~~~l~~~l~~l~ 429 (433)
. .+.+.++.....++...+ .++.+..|..|... ..+.+|+|+ +++++|++++++.|+
T Consensus 296 p~~~~v~f~~~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~ 372 (402)
T TIGR02006 296 PGNLNVSFNYVEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVK 372 (402)
T ss_pred CCeEEEEEeCcCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHH
Confidence 1 123444443444444332 38888888776431 137899996 568999999999998
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
+++
T Consensus 373 ~~~ 375 (402)
T TIGR02006 373 SAI 375 (402)
T ss_pred HHH
Confidence 875
No 173
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=7.8e-23 Score=191.18 Aligned_cols=335 Identities=16% Similarity=0.178 Sum_probs=238.6
Q ss_pred CCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCC--CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 62 DAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYS--GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 62 ~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
+..++||+++++ .+...+.+.+++.+++.+++.....+ -++...-..+|.+.||+|+ + .++.+++++|-.+.
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~----g-~e~al~f~SGy~AN 112 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL----G-AEAALLFSSGFVAN 112 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh----C-CCcEEEEcccchhH
Confidence 467999999997 56778889999999999865323322 3555666778888999987 5 44789999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CC--CccEEEEcCC
Q 045431 139 ISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VA--RTDIIFFCSP 214 (433)
Q Consensus 139 l~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~i~l~~p 214 (433)
+.++.++++++|.|+.++-.|.+..+.++..+ .+.+.+.+++-..+...+++ .. +.++|+...-
T Consensus 113 ~~~i~~l~~~~dli~~D~lnHASiidG~rls~------------a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegV 180 (388)
T COG0156 113 LGLLSALLKKGDLIFSDELNHASIIDGIRLSR------------AEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGV 180 (388)
T ss_pred HHHHHHhcCCCcEEEEechhhhhHHHHHHhCC------------CcEEEecCCCHHHHHHHHHhhhccCCCceEEEEecc
Confidence 99999999999999999999999999999777 46777776432222111222 11 2344443344
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC--CcceEEEecccccccccccceeeeecc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA--KEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
-.-.|.+-+ +++|++++++|++++++||+|+-..+++....+.+..+. .+..|+++||||.+|..| ||+.++
T Consensus 181 fSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~ 254 (388)
T COG0156 181 FSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS 254 (388)
T ss_pred ccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCc
Confidence 556788777 899999999999999999999976666554444433222 344799999999999888 999999
Q ss_pred ccccccCCcchhHHHHHH-HhhccC-CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCcc
Q 045431 293 KELLFSDGFPVAKDFNRI-VCTCFN-GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAP 370 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~ 370 (433)
..++ +.+... ....+. ..++...+++.+.++... .-..++++++++...+...+...|+.+.+ ....
T Consensus 255 ~~~~--------d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~~~~-s~s~ 323 (388)
T COG0156 255 AALI--------DYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLVLLP-SESP 323 (388)
T ss_pred HHHH--------HHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccCC-CCCC
Confidence 8885 444332 222222 234444444455554221 22667888889999988777777877643 4667
Q ss_pred EEEEECCC-CChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHh
Q 045431 371 YVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHL 431 (433)
Q Consensus 371 ~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 431 (433)
.+.+.+.. ....+....++++ ||.+.+...-. +.+...+|+++ ..++++|+.+++.|.++
T Consensus 324 I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 77777764 3456667777776 99998765433 44567899996 44899999999999875
No 174
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=2.7e-22 Score=195.77 Aligned_cols=334 Identities=14% Similarity=0.119 Sum_probs=201.0
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHh-hcccCCCCCCCCC-CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSY-ALSTQEGYSGYGA-EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~Y~~-~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
..|+|..+++. .|+.+.+++...+. .+........|.. ..-...+.+...+.+++.++++..+|++++|+ +++.+
T Consensus 26 ~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt-~al~~ 102 (416)
T PRK00011 26 EHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGS-QANAA 102 (416)
T ss_pred cCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCch-HHHHH
Confidence 47999988865 68889988877653 2211111112211 11122222211223333347777778777775 56665
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHH--HhCCcccccccccccceEEEeecCccCCcccCC---CC---CCCccEEEEc
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSV--IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---ST---VARTDIIFFC 212 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~i~l~ 212 (433)
+..++++||+|+++.|+|.++..... ..+..+ .+++.++.+.+. +..++ ++ ..++++|+++
T Consensus 103 ~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~-~~~d~~~l~~~i~~~~~k~v~~~ 172 (416)
T PRK00011 103 VYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKL---------YNVVSYGVDEET-GLIDYDEVEKLALEHKPKLIIAG 172 (416)
T ss_pred HHHHhcCCCCEEEEeccccCCccccccccccccce---------eeEeecCcCccc-CCcCHHHHHHHHHhcCCCEEEEC
Confidence 67788999999999999976532211 111111 256666665321 22222 21 1368888887
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCC-CCcccccCCCCcceEEEecccccccccccceeeee
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL-YISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~-~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
+++|| ...+ +++|.++|++||+++|+|++|+. +.+.+. +..+. ...++++|+||++ +|+|.||++
T Consensus 173 ~~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~------~~di~~~S~~K~l--~g~~gg~i~ 239 (416)
T PRK00011 173 ASAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP------HADVVTTTTHKTL--RGPRGGLIL 239 (416)
T ss_pred CCcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC------CCcEEEecCCcCC--CCCCceEEE
Confidence 66554 4444 78999999999999999999863 222221 22221 1237899999976 688999999
Q ss_pred ccc-cccccCCcchhHHHHHHHhhccCCCc-HHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeec-CC
Q 045431 291 IPK-ELLFSDGFPVAKDFNRIVCTCFNGAS-NISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYG-GK 367 (433)
Q Consensus 291 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~ 367 (433)
+++ +++ +.+.........+.+ ...+.++..++.....+++++..++++++++++.+.|++.|+.+.. ..
T Consensus 240 ~~~~~~~--------~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 311 (416)
T PRK00011 240 TNDEELA--------KKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVSGGT 311 (416)
T ss_pred eCCHHHH--------HHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCC
Confidence 974 553 555443322222222 2222222222221112346778889999999999999998887653 22
Q ss_pred CccEEEEECCCC--ChHHHHHHHHHcCCeEecCCC-CC---CCCCCCeEEEee------ccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPGR--SSWDVFSEILEKTHVVTTPGS-GF---GPGGEGFIRVSA------FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~-~f---~~~~~~~iRi~~------~~~~~~l~~~l~~l~~~l 432 (433)
.++++|+.+++. +..++.. .++++||.+..+. .+ .+..+..+|++. ..++++++..++.|++++
T Consensus 312 ~~~~~~i~~~~~~~~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 312 DNHLVLVDLRSKGLTGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred CCeEEEEeCcccCCCHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 458899998632 4455554 4556699997432 11 122345699963 236899999999998875
No 175
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=4.5e-23 Score=200.34 Aligned_cols=341 Identities=9% Similarity=0.063 Sum_probs=205.1
Q ss_pred hcCCCCceEEecCCCCCCC---ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCC
Q 045431 58 LKYPDAEVISLGIGDTTEP---IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDG 134 (433)
Q Consensus 58 ~~~~~~~~i~l~~g~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G 134 (433)
...+++.++|+..|..... .+|.+.+++.+.+....... ..+ ......++++.++++ .+ .+.++++++
T Consensus 26 ~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~~----~~--~~~~~~~~S 96 (400)
T PTZ00125 26 WDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS--RAF-YNDVLGLAEKYITDL----FG--YDKVLPMNS 96 (400)
T ss_pred EeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc--ccc-cCHHHHHHHHHHHhC----CC--CCEEEEeCC
Confidence 3445678999987754332 68899999999887543111 111 112233444444443 23 357888888
Q ss_pred hHHHHHH-HHHhc----------CCCCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCccCCcccCCCC
Q 045431 135 AKCDISR-LQIVF----------GSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST 202 (433)
Q Consensus 135 ~~~al~~-l~~l~----------~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (433)
+++++.. +.... ..+++|++.+-+|++........ +.......+......+..++..+...+...+.
T Consensus 97 Gs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~- 175 (400)
T PTZ00125 97 GAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ- 175 (400)
T ss_pred cHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhC-
Confidence 8888775 43321 13578888888887754333222 21111000110001223333321111111121
Q ss_pred CCCccEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc
Q 045431 203 VARTDIIFFCSPNNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF 281 (433)
Q Consensus 203 ~~~~~~i~l~~p~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~ 281 (433)
.+++++|++..++||||.+++ .+.+++|.++|++||+++|+||+|.++...+.+.........+| ++ ++||.++
T Consensus 176 ~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd-~~---~~sK~l~- 250 (400)
T PTZ00125 176 DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD-IV---LLGKALS- 250 (400)
T ss_pred CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC-EE---EEccccc-
Confidence 257888888777999999986 55699999999999999999999987765553222111111123 22 5789997
Q ss_pred cc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-
Q 045431 282 TG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL- 359 (433)
Q Consensus 282 ~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 359 (433)
+| +|+||++++++++ +.+.......+.+.+++.+.++.+.++.... +...++.+++.+.+.+.|++.
T Consensus 251 ~g~~~ig~v~~~~~~~--------~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~---~~~~~~~~~~~~~l~~~l~~l~ 319 (400)
T PTZ00125 251 GGLYPISAVLANDDVM--------LVIKPGEHGSTYGGNPLACAVAVEALEVLKE---EKLAENAQRLGEVFRDGLKELL 319 (400)
T ss_pred CCCcCcEEEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 56 5999999998875 3333322334455788888888776652111 122344445555555555543
Q ss_pred ---CC-eeecCCCccEEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHH
Q 045431 360 ---GF-KVYGGKNAPYVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKH 430 (433)
Q Consensus 360 ---g~-~~~~~~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~ 430 (433)
++ ....+ .|.++|+.++. ....++...+++ +||.+.|+ +.+++||+ +..+++++++++++|.+
T Consensus 320 ~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~------~~~~lRi~~~~~~~~~~i~~~l~~l~~ 391 (400)
T PTZ00125 320 KKSPWVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLKE-NGLLAKPT------HDNIIRFAPPLVITKEQLDQALEIIKK 391 (400)
T ss_pred hcCCCeEEEec-ccEEEEEEEccCcchHHHHHHHHHHH-CCeEEeec------CCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 32 22333 67888888763 234556666664 59999875 24789999 45799999999999988
Q ss_pred hh
Q 045431 431 LY 432 (433)
Q Consensus 431 ~l 432 (433)
++
T Consensus 392 ~l 393 (400)
T PTZ00125 392 VL 393 (400)
T ss_pred HH
Confidence 75
No 176
>PRK07505 hypothetical protein; Provisional
Probab=99.91 E-value=9.1e-23 Score=197.90 Aligned_cols=339 Identities=13% Similarity=0.083 Sum_probs=196.0
Q ss_pred HhcCCCCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCC-C--CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEc
Q 045431 57 MLKYPDAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGY-S--GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVS 132 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~-~--~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~ 132 (433)
....++...+||+.+.+ .+..++++.+++.+++.+.+..... + .+ ......++++.+++++ +. +.++++
T Consensus 40 ~~d~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~-~~~~~~~l~~~la~~~----~~--~~~~~~ 112 (402)
T PRK07505 40 ITLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRV-RSQILKDLEEALSELF----GA--SVLTFT 112 (402)
T ss_pred EEecCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhh-hhHHHHHHHHHHHHHh----CC--CEEEEC
Confidence 33445677899976543 3367899999999999864310111 1 12 1234566777777665 54 667777
Q ss_pred CChHHHHHHHHH----hcCCCC-EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCcc
Q 045431 133 DGAKCDISRLQI----VFGSNV-TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTD 207 (433)
Q Consensus 133 ~G~~~al~~l~~----l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (433)
+|+.+...++.. .+.+|+ .|++.+..|++...........+ .+++.++..+...+...+ .++++
T Consensus 113 sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~---------~~v~~~~~~d~~~l~~~~--~~~~~ 181 (402)
T PRK07505 113 SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADE---------TEVETIDHNDLDALEDIC--KTNKT 181 (402)
T ss_pred ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcC---------CeEEEeCCCCHHHHHHHH--hcCCC
Confidence 776655444422 223232 35566655544221101000000 256666653221111111 23568
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC--CCCCcccccCC-CCcceEEEeccccccccccc
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD--DNPRSIFEIPG-AKEVAIETSSFSKYAGFTGV 284 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~--~~~~~~~~~~~-~~~~vi~i~S~sK~~~~~G~ 284 (433)
++++++|+||||.+++ +++|.++|++|++++|+||+|+...+. +.......+.. .++++++++|+||.+|.+|
T Consensus 182 ~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G- 257 (402)
T PRK07505 182 VAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG- 257 (402)
T ss_pred EEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC-
Confidence 8999999999999999 688888899999999999999643332 22222222322 3678899999999998666
Q ss_pred ceeeeec-cccccccCCcchhHHHHHHHhhccC--CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 045431 285 RLGWTVI-PKELLFSDGFPVAKDFNRIVCTCFN--GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF 361 (433)
Q Consensus 285 r~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 361 (433)
||+++ +++++ +.+......... .++.++..++.+.++....+++.++.+.++++.+.+...+..
T Consensus 258 --g~~~~~~~~~~--------~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 324 (402)
T PRK07505 258 --GVIMLGDAEQI--------ELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--- 324 (402)
T ss_pred --eEEEeCCHHHH--------HHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh---
Confidence 88765 44553 445443322222 234566666666654111123344555565655544333221
Q ss_pred eeecCCCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCCC-CCCCeEEEeec--cChhHHHHHHHHHHHhh
Q 045431 362 KVYGGKNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGP-GGEGFIRVSAF--GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 362 ~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~iRi~~~--~~~~~l~~~l~~l~~~l 432 (433)
. ......++.++.++.. ...++...|++ +||.+.++..+.. .+++++||+.. .+++++++++++|++++
T Consensus 325 ~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 325 E-QSGSFLPIRLIYIGDEDTAIKAAKQLLD-RGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred c-CCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 1 1112223334444321 34566677665 5999998743321 23468999964 59999999999999876
No 177
>PLN00144 acetylornithine transaminase
Probab=99.91 E-value=9.1e-23 Score=195.50 Aligned_cols=338 Identities=10% Similarity=0.106 Sum_probs=207.4
Q ss_pred hcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCC
Q 045431 58 LKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDG 134 (433)
Q Consensus 58 ~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G 134 (433)
...+++..||+..|.. .+ ..+|.+.+++.+++.+... ...+ ...+....+|+.+.... ..+.++++++
T Consensus 10 ~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~~----~~~~~~~~la~~l~~~~--~~~~v~f~~s 80 (382)
T PLN00144 10 YDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH---VSNV----YHTIPQVELAKRLVASS--FADRVFFCNS 80 (382)
T ss_pred EeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC---cccc----ccCHHHHHHHHHHHhcC--CCCeEEEeCC
Confidence 3456778999976642 22 3679999999999976421 1111 11233445555554322 3469999999
Q ss_pred hHHHHHH-HH---HhcC------C------CCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccCCcc
Q 045431 135 AKCDISR-LQ---IVFG------S------NVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAENGFF 197 (433)
Q Consensus 135 ~~~al~~-l~---~l~~------~------gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 197 (433)
++++... +. .... + ..+|+..+.+|++.............+ ..+......+..++.++...+.
T Consensus 81 GseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 160 (382)
T PLN00144 81 GTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAAR 160 (382)
T ss_pred cHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHH
Confidence 9999885 31 1121 1 257888898898865444333321111 1111111233444443211111
Q ss_pred cCCCCCCCccEEEEcCCCCccccCCC--HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc--ccccCCCCcceEEEe
Q 045431 198 PDLSTVARTDIIFFCSPNNPTGAAAT--REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS--IFEIPGAKEVAIETS 273 (433)
Q Consensus 198 ~~~~~~~~~~~i~l~~p~nPtG~~~~--~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~vi~i~ 273 (433)
..+ ...++++|++.--+|| |.+++ .+.+++|.++|++||+++|+||+|.++...+.+.+ +..+ .+| +.
T Consensus 161 ~~~-~~~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~--~PD----i~ 232 (382)
T PLN00144 161 KLI-QKGKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV--EPD----IM 232 (382)
T ss_pred Hhc-CCCCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC--CCC----EE
Confidence 111 1245667665422899 44444 55599999999999999999999998877664332 3333 244 67
Q ss_pred cccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHH---hcCcCCh-hHHHHHHHHHHHHH
Q 045431 274 SFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLA---CLSPEGF-KAVHEVIGFYKENT 349 (433)
Q Consensus 274 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~---~l~~~~~-~~~~~~~~~~~~~~ 349 (433)
||||.++ +|+|+||+++++++. +.+.......+.+.++++++++.+ ++++... +++.++.+.+ +
T Consensus 233 t~sK~l~-~G~pig~v~~~~~~~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l---~ 300 (382)
T PLN00144 233 TLAKPLA-GGLPIGAVLVTEKVA--------SAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYL---R 300 (382)
T ss_pred Eeccccc-CCcceEEEEEcHHHH--------hccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---H
Confidence 8999997 999999999998875 333323344566788999998884 4443332 3334443333 3
Q ss_pred HHHHHHHhhcC-CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHH
Q 045431 350 DIIVETFNSLG-FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACK 426 (433)
Q Consensus 350 ~~l~~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~ 426 (433)
+.+.+.+.+++ +.-+.. .|+++|+.+. .....+...+. ++||.+.|+.. .+.+|++. ..++++++++++
T Consensus 301 ~~l~~~~~~~~~~~~vrg-~G~~~~l~l~-~~~~~~~~~~~-~~Gv~i~~~~~-----~~~lrl~p~~~~~~~~i~~~~~ 372 (382)
T PLN00144 301 ELLRRKLGGNPHVKEVRG-VGLLVGIQLD-VPAGPLVDACR-DSGLLVLTAGK-----GDVVRLVPPLVISEAELEQAVE 372 (382)
T ss_pred HHHHHHHhhCCCceeeec-CceEEEEEec-CccHHHHHHHH-HCCeEEeecCC-----CCEEEEeCCCccCHHHHHHHHH
Confidence 34444455542 222222 8899999984 23455666655 45999988621 37899995 358999999999
Q ss_pred HHHHhh
Q 045431 427 RFKHLY 432 (433)
Q Consensus 427 ~l~~~l 432 (433)
+|.+++
T Consensus 373 ~l~~~l 378 (382)
T PLN00144 373 ILADCL 378 (382)
T ss_pred HHHHHH
Confidence 999876
No 178
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.91 E-value=3.7e-22 Score=190.92 Aligned_cols=333 Identities=14% Similarity=0.112 Sum_probs=217.8
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCC--CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYS--GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
.++++|+.+++ .+...+.+.++..+++.+++.....+ -++...-..+|.++||+|+ + .++.+++++|..+.+
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g-~e~all~sSGy~AN~ 176 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K-KEDCLVCPTGFAANM 176 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C-CCcEEEECChHHHHH
Confidence 47899999987 57788999999999999886422211 1111223377888999987 4 456788888888877
Q ss_pred HHHHHh--------------cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCC
Q 045431 140 SRLQIV--------------FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVAR 205 (433)
Q Consensus 140 ~~l~~l--------------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (433)
.++..+ ..++|.|+++.-+|.+....++....++- .++..+++++-+.+...++...+
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~--------a~~~~f~HND~~~Le~~L~~~~~ 248 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGN--------VEVFVYRHCDMYHLNSLLSSCKM 248 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCC--------ceEEEeCCCCHHHHHHHHHhCCC
Confidence 776555 24667899999999999988887743211 25666666543332222332222
Q ss_pred ccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc-cCCCCcceEEEecccccccccc
Q 045431 206 TDIIFFCSP-NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE-IPGAKEVAIETSSFSKYAGFTG 283 (433)
Q Consensus 206 ~~~i~l~~p-~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~vi~i~S~sK~~~~~G 283 (433)
.+.++++.+ -++.|.+.+ +++|.++|++||+++|+||+|+.+..+.......+ +.-.++..|+++||||.+|+.|
T Consensus 249 ~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G 325 (476)
T PLN02955 249 KRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG 325 (476)
T ss_pred CceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC
Confidence 234555655 788899888 78888888999999999999997766543333332 2212466799999999998777
Q ss_pred cceeeeeccccccccCCcchhHHHHHHHhh-ccCC-CcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 045431 284 VRLGWTVIPKELLFSDGFPVAKDFNRIVCT-CFNG-ASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF 361 (433)
Q Consensus 284 ~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 361 (433)
||++++++++ +.+...... .+.+ .++....++.+.++.... -..++++++++.+++.+. .|+
T Consensus 326 ---Gfi~gs~~~~--------~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~---~G~ 389 (476)
T PLN02955 326 ---GFIACSKKWK--------QLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL---SGV 389 (476)
T ss_pred ---ceeecHHHHH--------HHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh---cCC
Confidence 9999998774 444432211 1122 233333444444432111 134667788888877763 365
Q ss_pred eeecCCCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 362 KVYGGKNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 362 ~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+ .++.+.+.+... ...++.+.|++ +||.+.+...-. +.+...+||++ ..+++||+.+++.|.+++
T Consensus 390 ~~----~sPI~pI~ig~~~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~ 459 (476)
T PLN02955 390 DI----SSPIISLVVGNQEKALKASRYLLK-SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCL 459 (476)
T ss_pred CC----CCCEEEEEeCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHH
Confidence 53 355666666532 33445666555 599997654432 34556799997 348999999999998764
No 179
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=1.8e-22 Score=192.63 Aligned_cols=274 Identities=17% Similarity=0.166 Sum_probs=180.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHH----HhCCcc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSV----IMGQTG 173 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~ 173 (433)
+..|+ .....+|++.+|++. +.+. .++++|+++++.++..++++||+|++++|+|++....+. ..|
T Consensus 46 y~r~~-~pt~~~le~~la~l~----g~~~--~~~~~sG~~ai~~~~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G--- 115 (366)
T PRK08247 46 YSRTG-NPTRGVLEQAIADLE----GGDQ--GFACSSGMAAIQLVMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWN--- 115 (366)
T ss_pred ccCCC-CchHHHHHHHHHHHh----CCCc--EEEEcCHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHhhccC---
Confidence 44553 456789999999997 6543 366777788988766788999999999999987544333 345
Q ss_pred cccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
.+++.++..+...+...+ .+++++|++++|+||+|. ..++++|+++|++||+++|+|++|+.....
T Consensus 116 ---------~~v~~vd~~d~~~l~~~i--~~~tklv~le~P~NP~~~---~~dl~~I~~la~~~g~~lIvD~t~~~~~~~ 181 (366)
T PRK08247 116 ---------VRFVYVNTASLKAIEQAI--TPNTKAIFIETPTNPLMQ---ETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ 181 (366)
T ss_pred ---------ceEEEECCCCHHHHHHhc--ccCceEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcccccc
Confidence 366666653211111111 257899999999999764 677999999999999999999999632111
Q ss_pred CCCCcccccCCCCcceEEEecccccccc-cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCc
Q 045431 254 DNPRSIFEIPGAKEVAIETSSFSKYAGF-TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP 332 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~vi~i~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 332 (433)
.++. .+..++++|+||.++. ++++.|+++++++.+ .+.+...+.......+++.|..+...++
T Consensus 182 ---~p~~-----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l-------~~~~~~~~~~~g~~~s~~~a~l~~~~l~- 245 (366)
T PRK08247 182 ---RPLE-----EGADIVIHSATKYLGGHNDVLAGLVVAKGQEL-------CERLAYYQNAAGAVLSPFDSWLLIRGMK- 245 (366)
T ss_pred ---Cchh-----cCCcEEEeecceeccCCCceeeeEEecChHHH-------HHHHHHHHHhcCCCCChHHHHHHHhccC-
Confidence 1111 2345999999999963 246889999874332 3555555544445567777776666554
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhc-CCe-eecC-CCccEEEEECCCCC-hHHHHHH---------HHHcCCeEecCC
Q 045431 333 EGFKAVHEVIGFYKENTDIIVETFNSL-GFK-VYGG-KNAPYVWVQFPGRS-SWDVFSE---------ILEKTHVVTTPG 399 (433)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~-~~g~~~~~~~~~~~-~~~~~~~---------l~~~~gi~v~~g 399 (433)
.+..+.++.+++++.+.+.|+++ ++. +..| .+|++.| .+.+.. ...++.. +.....+.+.|+
T Consensus 246 ----tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~ 320 (366)
T PRK08247 246 ----TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEEWVNPFLKSLKLITFAESLGGVESFITYPA 320 (366)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHHHHHHHHHcCCcceEccCCCCCceEEECCc
Confidence 23455567799999999999997 665 3344 6777766 564211 1112221 112335666777
Q ss_pred CCCCC-----------CCCCeEEEeecc
Q 045431 400 SGFGP-----------GGEGFIRVSAFG 416 (433)
Q Consensus 400 ~~f~~-----------~~~~~iRi~~~~ 416 (433)
..+.. -.++.+|||++.
T Consensus 321 ~~~~~~~~~~~r~~~gi~~~~~R~svGl 348 (366)
T PRK08247 321 TQTHADIPEEIRIANGVCNRLLRFSVGI 348 (366)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 65421 125689999765
No 180
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=1.1e-21 Score=188.94 Aligned_cols=318 Identities=14% Similarity=0.118 Sum_probs=203.6
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhc----CCCC
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVF----GSNV 150 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~----~~gd 150 (433)
++.+.+.+++.+.+.... .....| .+..++.+.+.+++.+.++++++++++++|+++++.. +..+. .+||
T Consensus 31 ~~~~~~~~a~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~ 105 (371)
T PRK13520 31 EPHPIARKAHEMFLETNL--GDPGLF---PGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKP 105 (371)
T ss_pred CchHHHHHHHHHHHhcCC--CCcccC---ccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence 456777788888775421 111122 2334433444444444347777789999999999876 44443 3579
Q ss_pred EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCCCHHHH
Q 045431 151 TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAATREQL 227 (433)
Q Consensus 151 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~~~~~~ 227 (433)
+|++.+++|..+...++..| .+++.++.+.++....+ +++ .+++++|++++++||||.+.+ +
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l 170 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLG------------VELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---I 170 (371)
T ss_pred eEEecCcchHHHHHHHHHcC------------ceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---H
Confidence 99999999999888777777 46777777543222221 222 246677777788999999988 8
Q ss_pred HHHHHHHHHcCCEEEEeccccccccC--CCCCcccccCCCCcceEEEecccccccccccceeeeecccc-ccccCCcchh
Q 045431 228 TRLVQFAKDNGSIIVYDSAYALYISD--DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE-LLFSDGFPVA 304 (433)
Q Consensus 228 ~~i~~~a~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~-~~~~~~~~~~ 304 (433)
++|.++|+++|+++++|++|+.+... ..... .... ..+...+..|.+|+. ++|.++|++++.++ ++
T Consensus 171 ~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~-~~~~-~~~vd~~~~s~~K~~-~a~~~~G~~~~~~~~~~-------- 239 (371)
T PRK13520 171 PELSKIALENGIFLHVDAAFGGFVIPFLDDPPN-FDFS-LPGVDSITIDPHKMG-LAPIPAGGILFRDESYL-------- 239 (371)
T ss_pred HHHHHHHHHcCCCEEEEecchhHHHHhhcCCCC-cccc-CCCCceEEECCcccc-CccCCceEEEEcCHHHH--------
Confidence 88888899999999999999865421 11111 1111 112235556888965 57889998776443 43
Q ss_pred HHHHHHHhh--------ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCe-eecCCCccEEEEE
Q 045431 305 KDFNRIVCT--------CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFK-VYGGKNAPYVWVQ 375 (433)
Q Consensus 305 ~~~~~~~~~--------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~g~~~~~~ 375 (433)
+.+...... ...+.+.....++.++++......+++.+++..++++++.+.|++.|+. +..+ ...++.+.
T Consensus 240 ~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v~~~ 318 (371)
T PRK13520 240 DALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-VLNIVAFD 318 (371)
T ss_pred HhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-CceEEEEe
Confidence 221100000 0001122334444555543333446788889999999999999988887 4443 45577777
Q ss_pred CCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhhC
Q 045431 376 FPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 376 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
++ +..++...|.++ ||.+.++. ..+++|+++ +.+++|++.+++.|+++++
T Consensus 319 ~~--~~~~v~~~L~~~-gi~v~~~~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 319 DP--NPDEVREKLRER-GWRVSVTR-----CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred cC--CHHHHHHHHHHC-CceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 76 455666666555 99987643 246899986 3689999999999998763
No 181
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=6.9e-23 Score=195.65 Aligned_cols=318 Identities=13% Similarity=0.118 Sum_probs=203.4
Q ss_pred CChHHHHHHHHHHHhhcccCCCC--CCCCC--CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhc----
Q 045431 76 PIPEVITSALAKRSYALSTQEGY--SGYGA--EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVF---- 146 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~--~~Y~~--~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~---- 146 (433)
++|+.+.+++.+.+.......+. ..++. ..-..++|+.+++++ ++++++|++|+|+++++.+ +..++
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~v~~~~g~t~a~~~~l~~l~~~~~ 84 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL----GADTEEVIFTSGATESNNLAILGLARAGE 84 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 57888999998887532110111 01110 012457788888876 8888999999999999986 45554
Q ss_pred CCC-CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCC
Q 045431 147 GSN-VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAA 222 (433)
Q Consensus 147 ~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~ 222 (433)
.+| +.|++....|+.+...+..+...+ .+++.++.+.++.++.+ +++ .++++++++++|+||||.++
T Consensus 85 ~~g~~~vi~~~~~~~s~~~~~~~~~~~G---------~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~ 155 (353)
T TIGR03235 85 QKGKKHIITSAIEHPAVLEPIRALERNG---------FTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQ 155 (353)
T ss_pred cCCCCeeeEcccccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceecc
Confidence 356 788888888887766555443223 37788887644333222 222 25788999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC-Cc
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD-GF 301 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~-~~ 301 (433)
+ +++|.++|+++|+++|+|++++.... +..+.. .+..+++.|++|++|.+| +|+++++++.+... ..
T Consensus 156 ~---~~~I~~l~~~~~~~~ivD~a~~~g~~---~~~~~~----~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~ 223 (353)
T TIGR03235 156 P---IREIAEVLEAHEAFFHVDAAQVVGKI---TVDLSA----DRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLK 223 (353)
T ss_pred C---HHHHHHHHHHcCCEEEEEchhhcCCc---cccccc----cCCCEEEeehhhcCCCCc--eEEEEEccCcccccccC
Confidence 8 78999999999999999999884221 222222 123477889999987556 89999988753110 00
Q ss_pred ch-h--HHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCC---ccEEEEE
Q 045431 302 PV-A--KDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKN---APYVWVQ 375 (433)
Q Consensus 302 ~~-~--~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~~~~~~ 375 (433)
.. . ....+.. ..+.+.....+..++++.. ...+++.+++++++++.+.+.|++.|+++..+.. ...+.+.
T Consensus 224 ~~~~~~~~~~~~~---~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~ 299 (353)
T TIGR03235 224 PIMFGGGQERGLR---PGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFS 299 (353)
T ss_pred ceeeCCCCcCccc---cCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEE
Confidence 00 0 0000111 1223333333333444311 1346788899999999999999888888764322 2245555
Q ss_pred CCCCChHHHHHHHHHcCCeEecCCCCCCCCC--CCeEEEeeccChhHHHHH
Q 045431 376 FPGRSSWDVFSEILEKTHVVTTPGSGFGPGG--EGFIRVSAFGHRGNVLEA 424 (433)
Q Consensus 376 ~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~--~~~iRi~~~~~~~~l~~~ 424 (433)
+++.+..++...| ++ +|.+.+|..|+... +.++|.+++.+++++..+
T Consensus 300 ~~~~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 300 IDGVNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred eCCcCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 6665656665555 56 99999999996543 347788877766655443
No 182
>PRK14012 cysteine desulfurase; Provisional
Probab=99.91 E-value=2.3e-22 Score=195.32 Aligned_cols=332 Identities=14% Similarity=0.132 Sum_probs=205.0
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHh---hcccCCC-C--CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSY---ALSTQEG-Y--SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~---~~~~~~~-~--~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
|-|..+... +.|+.+.+++.+.+. ...+... . ..+.......++|+.+++++ ++++++|++++|+++++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----g~~~~~v~~~~g~t~al 79 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI----GADPREIVFTSGATESD 79 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc----CcCcCeEEEeCCHHHHH
Confidence 556666554 678889999988775 1111000 0 01111124567788888886 88889999999999999
Q ss_pred HH-HHHh----cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEE
Q 045431 140 SR-LQIV----FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFF 211 (433)
Q Consensus 140 ~~-l~~l----~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l 211 (433)
.+ +..+ +++||+|++++++|+.+...+..+...+ .+++.++.++++.++.+ +++ .++++++++
T Consensus 80 ~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g---------~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~ 150 (404)
T PRK14012 80 NLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREG---------FEVTYLDPQSNGIIDLEKLEAAMRDDTILVSI 150 (404)
T ss_pred HHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCC---------CEEEEEccCCCCcCCHHHHHHhcCCCCEEEEE
Confidence 86 4444 3789999999999988766655442112 47778877654332222 222 357889999
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
++++||||.+++ +++|.++|+++|+++|+|++++... .+..+... +..+++.|++|.+| |+ ++|++++
T Consensus 151 ~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~---~~~~~~~~----~~D~~~~s~~K~~g-p~-g~G~l~~ 218 (404)
T PRK14012 151 MHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGK---VPIDLSKL----KVDLMSFSAHKIYG-PK-GIGALYV 218 (404)
T ss_pred ECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCC---cccCcccC----CCCEEEEehhhccC-CC-ceEEEEE
Confidence 999999999887 7888999999999999999987311 12223222 12377789999886 43 5899988
Q ss_pred cccccccCCcchhHH--HHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecC--
Q 045431 292 PKELLFSDGFPVAKD--FNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGG-- 366 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-- 366 (433)
+++...+..+..... ..+.. ..+.+.....+..+++... ...+....++.++.++++.+.|+++ ++.+.+.
T Consensus 219 ~~~~~~~~~~~~~g~~~~~~~~---~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~ 294 (404)
T PRK14012 219 RRKPRVRLEAQMHGGGHERGMR---SGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLE 294 (404)
T ss_pred ecCCCCCCCceecCCCccCCcc---CCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcc
Confidence 876532111100000 00011 1112222222222222211 1234556777888888888888876 5554321
Q ss_pred ---CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCC-----------------CCCeEEEee--ccChhHHHHH
Q 045431 367 ---KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPG-----------------GEGFIRVSA--FGHRGNVLEA 424 (433)
Q Consensus 367 ---~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~--~~~~~~l~~~ 424 (433)
....++|+.+. +..++...+ + ++.+..|..|.+. ..+.||+++ +.+++|++.+
T Consensus 295 ~~~~~~~~~~~~~~--~~~~~~~~l--~-~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~ 369 (404)
T PRK14012 295 QRVPGNLNVSFNYV--EGESLIMAL--K-DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYA 369 (404)
T ss_pred ccCCCEEEEEEeCc--CHHHHHHhC--C-CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 12234555553 233444433 2 7777777666431 136899996 4689999999
Q ss_pred HHHHHHhh
Q 045431 425 CKRFKHLY 432 (433)
Q Consensus 425 l~~l~~~l 432 (433)
++.|++++
T Consensus 370 ~~~l~~~~ 377 (404)
T PRK14012 370 IELVRKSI 377 (404)
T ss_pred HHHHHHHH
Confidence 99998875
No 183
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=9.6e-22 Score=189.44 Aligned_cols=213 Identities=14% Similarity=0.153 Sum_probs=148.7
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhH----HHhCCcccccc
Q 045431 103 AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSS----VIMGQTGEFQK 177 (433)
Q Consensus 103 ~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~ 177 (433)
+..+..+|++++|++. +. +++++++|+++++.+ +..++++||+|+++.|.|+...... +..|
T Consensus 62 ~~p~~~~Le~~iA~~~----g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G------- 128 (400)
T PRK06234 62 GNPTSTEVENKLALLE----GG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYG------- 128 (400)
T ss_pred CCccHHHHHHHHHHHh----CC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCC-------
Confidence 5678999999999997 43 357778888888876 6788999999999999998765443 4455
Q ss_pred cccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc--CCEEEEeccccccccCCC
Q 045431 178 DAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDN--GSIIVYDSAYALYISDDN 255 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~--~~~li~De~~~~~~~~~~ 255 (433)
.+++.++..+...+...+ .+++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|+.....
T Consensus 129 -----~~v~~vd~~d~e~l~~~i--~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~-- 196 (400)
T PRK06234 129 -----VEVTFVDTSNLEEVRNAL--KANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ-- 196 (400)
T ss_pred -----eEEEEECCCCHHHHHHHh--ccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC--
Confidence 366666653211111111 357899999999999999988 78888889887 9999999999865332
Q ss_pred CCcccccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHH--HhhccCCCcHHHHHHHHHhcCc
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRI--VCTCFNGASNISQAGGLACLSP 332 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~ 332 (433)
.++ .. +..+++.|+||.++.+|+++ ||++++++++ +.+... ........++.....+...++
T Consensus 197 -~~l-~~----g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~--------~~l~~~~~~~~~g~~l~p~~a~l~~~~l~- 261 (400)
T PRK06234 197 -RPL-QL----GADVVVHSATKYLNGHGDVIAGFVVGKEEFI--------NQVKLFGIKDMTGSVIGPFEAFLIIRGMK- 261 (400)
T ss_pred -Cch-hh----CCcEEEeeccccccCCCCceeEEEEecHHHH--------HHHHHHHHHHhcCCCCCHHHHHHHHhccC-
Confidence 112 11 23489999999998788875 9999988764 444321 111223345554444443333
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 333 EGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+..+.++..++...+.+.|+++
T Consensus 262 ----tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 262 ----TLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHcC
Confidence 33555666677888888888876
No 184
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.91 E-value=4.8e-22 Score=192.82 Aligned_cols=357 Identities=8% Similarity=0.032 Sum_probs=213.8
Q ss_pred HHHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC-CC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI-EE 126 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~-~~ 126 (433)
+.++......+++..||+..|.-. -..+|.+.+++.+++.+.. ...+. ....+....+|+.+....+. ..
T Consensus 28 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~----~~~~~--~~~~~~~~~la~~l~~~~p~~~~ 101 (421)
T PRK09792 28 SAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFT----HTAYQ--IVPYESYVTLAEKINALAPVSGQ 101 (421)
T ss_pred eccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhcc----CcccC--ccCCHHHHHHHHHHHHhCCCCCC
Confidence 344444556677889999766432 2368899999999987632 11111 11233334555555432222 23
Q ss_pred CcEEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcc-cccccccccceEEEeecCccC-Ccc---
Q 045431 127 GDIFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTG-EFQKDAEKYGKIEYMRCTAEN-GFF--- 197 (433)
Q Consensus 127 ~~i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~-~~~--- 197 (433)
+.+++++++++|+.. + ........+|+..+.+|++........ +... ....++.....+..+|...+. +..
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~ 181 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQD 181 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHH
Confidence 688888899998875 3 122234467888898898865433333 2110 111111111123333332111 110
Q ss_pred --cCCCC-------CCCccEEEEcCCCCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCc
Q 045431 198 --PDLST-------VARTDIIFFCSPNNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKE 267 (433)
Q Consensus 198 --~~~~~-------~~~~~~i~l~~p~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 267 (433)
..++. ..++.+|++.-.++|+|..+ +.+.+++|.++|++||+++|+||++.++.+.+.+.....+...+|
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD 261 (421)
T PRK09792 182 SLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD 261 (421)
T ss_pred HHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc
Confidence 01111 13566666543389999876 899999999999999999999999999877665544444433344
Q ss_pred ceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHH
Q 045431 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYK 346 (433)
Q Consensus 268 ~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~ 346 (433)
+.||||.++ +|+|+||++++++++ +.+.......+.+.++++++++.+.++.... +++++.+ .+.
T Consensus 262 ----i~t~gK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g 327 (421)
T PRK09792 262 ----LMTMAKSLA-GGMPLSGVVGNANIM--------DAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLG 327 (421)
T ss_pred ----EEEeehhhc-CCCceEEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHH
Confidence 578999998 999999999988875 2232223445667889999977666652211 2333333 223
Q ss_pred HHHHHHHHHHh-hcCCeeecCCC-ccEEEEECCCC--------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--
Q 045431 347 ENTDIIVETFN-SLGFKVYGGKN-APYVWVQFPGR--------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA-- 414 (433)
Q Consensus 347 ~~~~~l~~~l~-~~g~~~~~~~~-g~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~-- 414 (433)
++.+...+.|. +++. +..+.+ |+++|+.++.. ....+...+++ +||.+.+.. ...+.|||..
T Consensus 328 ~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g----~~~~~irl~P~l 401 (421)
T PRK09792 328 QRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCG----AYGNVIRFLYPL 401 (421)
T ss_pred HHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecC----CCCCEEEEeCCC
Confidence 33222222332 2332 223445 89999999732 12345555555 599995421 1247899994
Q ss_pred ccChhHHHHHHHHHHHhhC
Q 045431 415 FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 415 ~~~~~~l~~~l~~l~~~l~ 433 (433)
..+++++++++++|.++++
T Consensus 402 ~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 402 TIPDAQFDAAMKILQDALS 420 (421)
T ss_pred cCCHHHHHHHHHHHHHHHh
Confidence 4689999999999998863
No 185
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.90 E-value=5e-21 Score=184.45 Aligned_cols=286 Identities=14% Similarity=0.152 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhc------CCCCEEEEeCCCChhhhhhHHHhCCccccccccc
Q 045431 108 KPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVF------GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180 (433)
Q Consensus 108 ~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 180 (433)
.++++.+++++ +++++++++++|+++++.+ +..+. ++||+|++++++|.++...++..|
T Consensus 62 ~~~~~~la~~~----g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G---------- 127 (373)
T TIGR03812 62 EEVVGSLGNLL----HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLG---------- 127 (373)
T ss_pred HHHHHHHHHHh----CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcC----------
Confidence 44555555554 8888889999999998765 43332 477999999999999888888888
Q ss_pred ccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC--C-
Q 045431 181 KYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD--D- 254 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~--~- 254 (433)
.+++.++.+.+.....+ +++ .+++..+++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+... .
T Consensus 128 --~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~ 202 (373)
T TIGR03812 128 --LELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKK 202 (373)
T ss_pred --CeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhc
Confidence 47777777543222111 221 234544555568999999877 778888899999999999999864321 0
Q ss_pred --CCCcccccCCCCcceEEEecccccccccccceeeee-ccccccccCCcchhHHHHHHHhhcc--------CCCcHHHH
Q 045431 255 --NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV-IPKELLFSDGFPVAKDFNRIVCTCF--------NGASNISQ 323 (433)
Q Consensus 255 --~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~q 323 (433)
....+ .+. ...-..+..|.+|+ ++++.+.|+++ .+++++ +.+........ .+.+....
T Consensus 203 ~~~~~~~-d~~-~~~~d~~~~s~~K~-~~~~~~~G~~~~~~~~~~--------~~l~~~~~~~~~~~~~~~~gt~~~~~~ 271 (373)
T TIGR03812 203 GYNPPPF-DFS-LPGVQSITIDPHKM-GLSPIPAGGILFRSKSYL--------KYLSVDAPYLTVKKQATITGTRSGASA 271 (373)
T ss_pred CCCCCCc-ccc-CCCCCEEEECcccc-CCCcCCceEEEEeCHHHH--------hhhcccCcccCCCCCcceEeechhHHH
Confidence 00011 010 01112445678894 45788888655 455553 22210000000 11233445
Q ss_pred HHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCC
Q 045431 324 AGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFG 403 (433)
Q Consensus 324 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~ 403 (433)
.++.++++......+++..++..++++++.+.|+++|+....+....++.+.+++ ..++.+.|.+ +||.+.++.
T Consensus 272 ~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~~--~~~v~~~L~~-~gi~v~~~~--- 345 (373)
T TIGR03812 272 AATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLNIVAFEVDD--PEEVRKKLRD-RGWYVSVTR--- 345 (373)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCceEEEEEeCC--HHHHHHHHHH-CCceeccCC---
Confidence 5555555543345678888999999999999999987754333355677777763 3466666655 499997642
Q ss_pred CCCCCeEEEeec--cChhHHHHHHHHHHHh
Q 045431 404 PGGEGFIRVSAF--GHRGNVLEACKRFKHL 431 (433)
Q Consensus 404 ~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 431 (433)
.++++|+++. ++++|++.+++.|+++
T Consensus 346 --~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 346 --CPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred --CCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 3568999964 6899999999999763
No 186
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.90 E-value=1.3e-21 Score=189.07 Aligned_cols=345 Identities=12% Similarity=0.099 Sum_probs=208.8
Q ss_pred HHHHHhcCCCCceEEecCCC---CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGD---TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
++......+++..||+..|. +--..+|.+.+++.+++.+... ....|. .....+|.+.|+++. + .+.+
T Consensus 25 ~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~~~-~~~~~~la~~L~~~~----~--~~~~ 95 (397)
T TIGR03246 25 EGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWH--IGNGYT-NEPVLRLAKKLVDAT----F--ADKV 95 (397)
T ss_pred ecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccc--ccCccC-CHHHHHHHHHHHhhC----C--CCEE
Confidence 33334455677899997763 2123689999999999875321 111221 222344555555442 3 3689
Q ss_pred EEcCChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhH-HHhCCcccccccccccceEEEeecCccCCcccC
Q 045431 130 FVSDGAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSS-VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD 199 (433)
Q Consensus 130 ~~~~G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (433)
+++++++++......+. ...+.|+..+-+|++..... ...+.......++.....+..++.++...+...
T Consensus 96 ~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 175 (397)
T TIGR03246 96 FFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKAL 175 (397)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHH
Confidence 99988888887632222 12356777777777754333 222211110001111123344444321111111
Q ss_pred CCCCCCccEEEEcCCCCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccc
Q 045431 200 LSTVARTDIIFFCSPNNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKY 278 (433)
Q Consensus 200 ~~~~~~~~~i~l~~p~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~ 278 (433)
+ .+++++|++..++++.|+.. +.+.+++|.++|++||+++|.||+|.++...+.......+.-.+| +-++||.
T Consensus 176 l--~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD----i~t~~K~ 249 (397)
T TIGR03246 176 I--SDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD----ILTSAKA 249 (397)
T ss_pred h--ccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC----EEEeehh
Confidence 1 14677766653344555443 889999999999999999999999987755554322222221233 3389999
Q ss_pred ccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh
Q 045431 279 AGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 279 ~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
++ +|+++||++++++++ +.+.......+.+.++++++++.+.++... -+++.++++++.+++.+.|++
T Consensus 250 lg-gG~pigav~~~~~i~--------~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~ 317 (397)
T TIGR03246 250 LG-GGFPIGAMLTTTEIA--------AHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEK 317 (397)
T ss_pred hh-CCcceeEEEEcHHHH--------HhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHH
Confidence 98 899999999998874 334322233445578888888888886321 145677888888888888887
Q ss_pred cC--C---eeecCCCccEEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHH
Q 045431 359 LG--F---KVYGGKNAPYVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRF 428 (433)
Q Consensus 359 ~g--~---~~~~~~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l 428 (433)
++ . ....+ .|.++.+.+.. .....+...+++ +||.+.+. +.+++|++ +..+++++++++++|
T Consensus 318 l~~~~~~~~~vrg-~G~~~~i~~~~~~~~~~~~~~~~l~~-~Gv~~~~~------g~~~lR~~p~~~~t~~~i~~~~~~l 389 (397)
T TIGR03246 318 INARYNVFSEIRG-KGLLIGAVLTEAYQGKAKQFVNAAAE-EGVIALIA------GPNVVRFAPSLVISDDDIDEGLARF 389 (397)
T ss_pred HHhcCCCeEeeec-CceEEEEEEcCchhhHHHHHHHHHHH-CCeEEeec------CCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 53 2 12222 34555555542 134455566555 59998763 24689996 667999999999999
Q ss_pred HHhh
Q 045431 429 KHLY 432 (433)
Q Consensus 429 ~~~l 432 (433)
.+++
T Consensus 390 ~~~l 393 (397)
T TIGR03246 390 ERAI 393 (397)
T ss_pred HHHH
Confidence 8876
No 187
>PLN02651 cysteine desulfurase
Probab=99.90 E-value=8.1e-22 Score=188.86 Aligned_cols=315 Identities=16% Similarity=0.164 Sum_probs=201.3
Q ss_pred CChHHHHHHHHHHHhhcccCCC--CCCCCC--CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh----c
Q 045431 76 PIPEVITSALAKRSYALSTQEG--YSGYGA--EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV----F 146 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~--~~~Y~~--~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l----~ 146 (433)
+.|+.+.+++.+.+........ ...++. ..-..++|+.+++++ ++++++|++|+|+++++++ +..+ .
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~v~~t~~~t~a~~~~l~~~~~~~~ 85 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI----GADPKEIIFTSGATESNNLAIKGVMHFYK 85 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh----CCCCCeEEEeCCHHHHHHHHHHHHHHhcc
Confidence 6788899999887753211011 001110 112446667777765 8888999999999999775 4332 4
Q ss_pred CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCCC
Q 045431 147 GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAAT 223 (433)
Q Consensus 147 ~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~~ 223 (433)
++||+|++....|+++...+..+...+ .+++.++.+.++.+..+ +++ .++++++++++++||||.+++
T Consensus 86 ~~g~~vl~~~~~h~s~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~ 156 (364)
T PLN02651 86 DKKKHVITTQTEHKCVLDSCRHLQQEG---------FEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP 156 (364)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHhcC---------CEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc
Confidence 789999999989988766555443223 37777877644332221 221 357899999999999999988
Q ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
+++|.++|+++|+++++|.+++.... +..+..+ +..+++.|.+|++|.+| +|+++++++.+....+.+
T Consensus 157 ---l~~I~~~~~~~g~~~~vD~a~~~g~~---~~~~~~~----~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~ 224 (364)
T PLN02651 157 ---VEEIGELCREKKVLFHTDAAQAVGKI---PVDVDDL----GVDLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLM 224 (364)
T ss_pred ---HHHHHHHHHHcCCEEEEEcchhhCCc---ccCcccC----CCCEEEechhhhCCCCc--eEEEEEcCCCCCCCCccc
Confidence 77889999999999999999984211 3333322 23488899999765334 899999887653211111
Q ss_pred hHH-H-HHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh-c-CCeeecCCC-----ccEEEE
Q 045431 304 AKD-F-NRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS-L-GFKVYGGKN-----APYVWV 374 (433)
Q Consensus 304 ~~~-~-~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~-----g~~~~~ 374 (433)
... . .... ..+.+.....++.++++.. ....++.+++.++.++++.+.|++ . |+++..+.. ...+.+
T Consensus 225 ~g~~~~~~~~---~GT~~~~~~~~l~~al~~~-~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~ 300 (364)
T PLN02651 225 SGGGQERGRR---SGTENTPLVVGLGAACELA-MKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNL 300 (364)
T ss_pred cCCCccCCcc---CCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEE
Confidence 100 0 0111 1223444444344444311 123477778888889999999876 3 788776411 335666
Q ss_pred ECCCCChHHHHHHHHHcCCeEecCCCCCCCC-----------------CCCeEEEee--ccChhHHH
Q 045431 375 QFPGRSSWDVFSEILEKTHVVTTPGSGFGPG-----------------GEGFIRVSA--FGHRGNVL 422 (433)
Q Consensus 375 ~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~-----------------~~~~iRi~~--~~~~~~l~ 422 (433)
.+++.+..++...| .+ |.+..|..|... ..+.+|+|+ ++|++|++
T Consensus 301 ~~~~~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 301 SFAYVEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EeCCCCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 77777777777666 33 999989877432 137899996 66888874
No 188
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=3.8e-21 Score=183.78 Aligned_cols=212 Identities=18% Similarity=0.197 Sum_probs=148.2
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCCh----hhhhhHHHhCCccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYP----AYVDSSVIMGQTGEFQKD 178 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~----~~~~~~~~~g~~~~~~~~ 178 (433)
.....+|++++|++. +.+ ..+++++| ++++.. +..++++||+|+++.|.|. .+...++..|
T Consensus 44 ~p~~~~L~~~lA~l~----g~~-~~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G-------- 109 (376)
T PRK06460 44 NPTVLELTKKIVELE----NAE-MGVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWG-------- 109 (376)
T ss_pred CccHHHHHHHHHHHh----CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhC--------
Confidence 467899999999997 654 35666666 578876 6778999999999987664 3345555566
Q ss_pred ccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 179 AEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
.++..++.+.+ +....+ ..+++++|++++|+||||.+++. ++|.++|+++|+++|+|++|+.... ..+
T Consensus 110 ----~~v~~~~~~~~-~~l~~~-~~~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~~---~~~ 177 (376)
T PRK06460 110 ----VNVDASNPGSD-NIIEKA-KSKRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPIN---QKP 177 (376)
T ss_pred ----cEEEEECCCCH-HHHHHh-cCCCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCcccc---CCh
Confidence 36666665432 222222 13578999999999999999994 5688889999999999999975311 111
Q ss_pred ccccCCCCcceEEEecccccccc-cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhH
Q 045431 259 IFEIPGAKEVAIETSSFSKYAGF-TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKA 337 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 337 (433)
+. .+..+++.|+||+++. .+.+.||++++++++ +.+.+.........++. .+..+++ +.++
T Consensus 178 ---l~--~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~--------~~l~~~~~~~g~~~~~~---~a~~~l~--~~~~ 239 (376)
T PRK06460 178 ---LE--LGADIVVHSASKFLAGHNDVIAGLAAGYGKLL--------NVIDQMRRTLGTSLDPH---AAYLTLR--GIKT 239 (376)
T ss_pred ---hh--cCCCEEEeecceeccCCCCceEEEEecCHHHH--------HHHHHHHHhcCCCCCHH---HHHHHHh--chhh
Confidence 11 1245899999999851 236799999988874 56655444333333332 2333333 3466
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 045431 338 VHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
++.+.++..++++.+.+.|+++
T Consensus 240 l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 240 LKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 7888889999999999999986
No 189
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.90 E-value=3.4e-21 Score=184.20 Aligned_cols=221 Identities=14% Similarity=0.215 Sum_probs=153.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF 175 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~ 175 (433)
+..| +.....+|++.+|++. + .+++++++|+++++.+ +..++++||+|+++.|+|++....+... +..+
T Consensus 45 Y~R~-~~p~~~~le~~lA~l~----g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~-- 115 (382)
T TIGR02080 45 YSRS-GNPTRDLLQQALAELE----G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC-- 115 (382)
T ss_pred ccCC-CCchHHHHHHHHHHHh----C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC--
Confidence 4566 3456789999999986 4 4689999999999997 5778999999999999999766555433 2211
Q ss_pred cccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
..+..++.++...+...+ .+++++|++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 116 -------~~v~~~d~~d~~~l~~ai--~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~-- 181 (382)
T TIGR02080 116 -------FRVLFVDQGDEQALRAAL--AQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ-- 181 (382)
T ss_pred -------eEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC--
Confidence 244444322111111111 257899999999999999998 678888899999999999999854322
Q ss_pred CCcccccCCCCcceEEEeccccccc-ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAG-FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG 334 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 334 (433)
.++ .+ + . .++++|+||.++ .++++.|++++++..+ .+++...........+++.+..+..-
T Consensus 182 -~pl-~~-g-a--Divv~S~sK~l~G~~~~~~G~i~~~~~~~-------~~~l~~~~~~~g~~~sp~~a~l~lr~----- 243 (382)
T TIGR02080 182 -NPL-AL-G-A--DLVLHSCTKYLNGHSDVIAGAVIAKDPQV-------AEELAWWANNLGVTGGAFDSYLTLRG----- 243 (382)
T ss_pred -Cch-hh-C-C--CEEEeecceeccCCCCceeEEEEeCCHHH-------HHHHHHHHHccCCCCCHHHHHHHHcc-----
Confidence 122 11 1 1 388999999885 4678999988754432 35555555544455666665544332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 335 FKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+.+..+.++..++...+.+.|+++
T Consensus 244 l~tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 244 LRTLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhC
Confidence 3345555677778888999999886
No 190
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.90 E-value=5e-21 Score=182.44 Aligned_cols=282 Identities=16% Similarity=0.173 Sum_probs=180.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH-hCCcccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEF 175 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~ 175 (433)
+..| +.....+|++++|++. .++.|++++| ++++.+ +.+++++||+|++.+|+|+++...+.. +...|
T Consensus 45 y~ry-~~p~~~~Le~~lA~l~------~~~~v~~~sG-~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G-- 114 (366)
T PRK07582 45 YGRA-SNPTWRALEAALGELE------GAEALVFPSG-MAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG-- 114 (366)
T ss_pred eECC-CCccHHHHHHHHHHHc------CCCEEEECCH-HHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe--
Confidence 4456 5668899999999984 3455555555 568876 677899999999999999888765532 11112
Q ss_pred cccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
.+++.++.+++.. ...+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.... ...
T Consensus 115 -------~~v~~v~~~~~~~-----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~~~ 178 (366)
T PRK07582 115 -------VTVREAPTAGMAE-----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-GQR 178 (366)
T ss_pred -------EEEEEECCCChHH-----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-ccC
Confidence 3777777653311 12357899999999999998776 8999999999999999999996321 111
Q ss_pred CCcccccCCCCcceEEEeccccccc-ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAG-FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG 334 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 334 (433)
+ + .+ + . .++++|+||.++ .+|+|+||++++++.+ .+.+..........++++....+...++
T Consensus 179 p--~-~~-g-~--Divv~S~sK~l~G~~g~~~G~v~~~~~~l-------~~~l~~~~~~~g~~~~~~~a~l~~r~l~--- 241 (366)
T PRK07582 179 P--L-EL-G-A--DLVVASDTKALTGHSDLLLGYVAGRDPEL-------MAAVERWRLLAGAIPGPFEAWLAHRSLG--- 241 (366)
T ss_pred c--h-hc-C-C--cEEEecccccccCCCCeeEEEEEcCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhccc---
Confidence 2 2 12 1 1 278899999884 3579999999864332 3555555554455566676665555554
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc-CCe-eec------C----------CCccEEEEECCCCChHHHHHHHHHcCCeEe
Q 045431 335 FKAVHEVIGFYKENTDIIVETFNSL-GFK-VYG------G----------KNAPYVWVQFPGRSSWDVFSEILEKTHVVT 396 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~------~----------~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v 396 (433)
.+..+.++..++...+.+.|+++ .+. +.. | ..|-.+.+.+. + .+...+++++.++..
T Consensus 242 --tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~-~~~~~~~~~~l~~~~ 316 (366)
T PRK07582 242 --TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--D-AAAAERFVAASRLVV 316 (366)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--C-HHHHHHHHHhCCcce
Confidence 23455567778889999999887 432 221 1 13445666775 2 334445555556544
Q ss_pred cCCCCCCC--------------CCCCeEEEeecc-C-hhHHHHHHHHH
Q 045431 397 TPGSGFGP--------------GGEGFIRVSAFG-H-RGNVLEACKRF 428 (433)
Q Consensus 397 ~~g~~f~~--------------~~~~~iRi~~~~-~-~~~l~~~l~~l 428 (433)
. +..++. ..++.||+|+.. + ++.++.+.++|
T Consensus 317 ~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al 363 (366)
T PRK07582 317 A-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERAL 363 (366)
T ss_pred e-cccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 2 122211 124689999754 2 33344444444
No 191
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=3.8e-21 Score=183.22 Aligned_cols=298 Identities=15% Similarity=0.151 Sum_probs=194.3
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCC----
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNV---- 150 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd---- 150 (433)
.+|+++.+++.++... |. +.+++++++++++.+.++. +++++|+|+++++.+ +.+++++||
T Consensus 24 ~~~~~v~~a~~~~~~~---------~~---~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~ 89 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN---------YF---EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLV 89 (363)
T ss_pred CCCHHHHHHHHHHHhc---------CC---CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchh
Confidence 3789999999988642 21 4567788887777665554 478999999999997 688889998
Q ss_pred -----------EEEEeCCCChhh----hhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEE-E
Q 045431 151 -----------TMAVQDPSYPAY----VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIF-F 211 (433)
Q Consensus 151 -----------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~-l 211 (433)
+|+++.|.|..+ .......| ..++.++.+ ...+++ +++ .+++++++ +
T Consensus 90 ~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g------------~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v 155 (363)
T TIGR01437 90 ENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGG------------GKVVEAGYA--NECSAEQLEAAITEKTAAILYI 155 (363)
T ss_pred hcccccccccceEEEECccchhcCCchHHHHHhcC------------CeEEEEcCC--CCCCHHHHHHhcChhceEEEEE
Confidence 999999888765 34555666 356666542 222221 222 36788766 4
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeec
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
++||||+|.+.+ +++|.++|++||+++|+|++|+.- .....++ + ..+++.|++|++ +|++.|+++.
T Consensus 156 ~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~-----~~~~~~~-g---~D~~~~S~~K~l--~gp~~G~l~~ 221 (363)
T TIGR01437 156 KSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED-----LQKYYRL-G---ADLVIYSGAKAI--EGPTSGLVLG 221 (363)
T ss_pred ecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc-----hHHHHHc-C---CCEEEEeCCccc--CCCceEEEEE
Confidence 688999999988 677899999999999999999721 1111222 1 237789999977 6788999998
Q ss_pred cccccccCCcchhHHHHHHHhhc-----cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeec
Q 045431 292 PKELLFSDGFPVAKDFNRIVCTC-----FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYG 365 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 365 (433)
+++++ +.+....... ....+..++.++...+...+. +..+.+.++++.+.+.|.+. |+.+..
T Consensus 222 ~~~~i--------~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~----~~~~~~~~~~~~l~~~L~~i~g~~~~~ 289 (363)
T TIGR01437 222 KKKYI--------EWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGK----ESGAEMVAKLTPFIEALNTLKGVSASI 289 (363)
T ss_pred cHHHH--------HHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCc----ccHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 87765 2221111000 011233455555655543332 22334445677899999987 887653
Q ss_pred C--CCcc-----EEEEECC--CCChHHHHHHHHHcCC--eEecCCCCCCCCCCCeEEEee-ccChhHHHHHHHHHHHhh
Q 045431 366 G--KNAP-----YVWVQFP--GRSSWDVFSEILEKTH--VVTTPGSGFGPGGEGFIRVSA-FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 366 ~--~~g~-----~~~~~~~--~~~~~~~~~~l~~~~g--i~v~~g~~f~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~l 432 (433)
+ ..+. -+.++.. +.+..++.+.| ++++ |.+++ . ...++.+|+++ +.+++|++.++++|++++
T Consensus 290 ~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L-~~~~~~I~~r~--~--~~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 290 VQDEAGRDIARAEIRFDESELGMTAADVVQAL-RQGEPAIYTRG--Y--KANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred ecCCCCCcCceEEEEEeccCCCCCHHHHHHHH-hcCCCCEEEee--e--eecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 2 1111 1223332 44566777666 4446 77765 2 23457899996 457999999999998864
No 192
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=6.6e-21 Score=183.02 Aligned_cols=213 Identities=16% Similarity=0.204 Sum_probs=149.8
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh----HHHhCCcccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDA 179 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 179 (433)
+-..+|++.+++++ +. +++++++|+++++.+ +..++++||+|+++.+.|++.... +...|
T Consensus 61 p~~~~le~~la~l~----g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G--------- 125 (390)
T PRK08133 61 PTVTMFQERLAALE----GA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFG--------- 125 (390)
T ss_pred hHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcC---------
Confidence 34678889999886 53 468889999999986 678899999999999999876543 33455
Q ss_pred cccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc
Q 045431 180 EKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI 259 (433)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 259 (433)
.+++.++.++...+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..... .++
T Consensus 126 ---~~v~~vd~~d~~~l~~~i--~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~---~pl 194 (390)
T PRK08133 126 ---IETTFVDLTDLDAWRAAV--RPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ---QPL 194 (390)
T ss_pred ---cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC---Cch
Confidence 377777765332332222 368899999999999999987 789999999999999999998743221 112
Q ss_pred cccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 260 FEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 260 ~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
.. +..+++.|+||+++.+|.++ ||++++++.+ +.+...........+...+.. +++ +.+.+
T Consensus 195 -~~----g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~--------~~~~~~~~~~g~~~~~~~a~~---~l~--gl~tl 256 (390)
T PRK08133 195 -KL----GADVVIHSATKYLDGQGRVLGGAVVGSKELM--------EEVFGFLRTAGPTLSPFNAWV---FLK--GLETL 256 (390)
T ss_pred -hh----CCcEEEeecceeecCCcceEeEEEEcCHHHH--------HHHHHHHHHhCCCCCHHHHHH---HHc--ccchH
Confidence 11 12388999999998788888 5677776654 444443433333344444333 332 22345
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CC
Q 045431 339 HEVIGFYKENTDIIVETFNSL-GF 361 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~-g~ 361 (433)
..+.++..+++..+.+.|+++ ++
T Consensus 257 ~~R~~~~~~~a~~la~~L~~~p~v 280 (390)
T PRK08133 257 SLRMEAHSANALALAEWLEAHPGV 280 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCe
Confidence 666677778888999999887 44
No 193
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=4.3e-21 Score=184.36 Aligned_cols=262 Identities=16% Similarity=0.159 Sum_probs=166.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCccccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQ 176 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 176 (433)
+..|+ .....+|++.+|++. +. ++.|++++|. +++.+ +..++++||+|+++.|.|++....+........
T Consensus 55 y~r~~-~pt~~~Le~~lA~l~----G~-~~al~~~sG~-~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g-- 125 (386)
T PRK06767 55 YSRLG-NPTVKLFEERMAVLE----GG-EEALAFGSGM-AAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM-- 125 (386)
T ss_pred ccCCC-CcchHHHHHHHHHHh----CC-CcEEEECCHH-HHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC--
Confidence 44553 445789999999997 54 3566666665 57765 678899999999999999887666554432110
Q ss_pred ccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 177 KDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.++..++..+...+...+ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.....
T Consensus 126 ------i~~~~~~~~d~~~l~~~i--~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~--- 191 (386)
T PRK06767 126 ------ITHSFCDMETEADIENKI--RPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ--- 191 (386)
T ss_pred ------eEEEEeCCCCHHHHHHhh--CcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 234334332111111111 357899999999999999998 688888899999999999999742221
Q ss_pred CcccccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHH-HHHHhhccCCCcHHHHHHHHHhcCcCC
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDF-NRIVCTCFNGASNISQAGGLACLSPEG 334 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~q~~~~~~l~~~~ 334 (433)
.++. . +..+++.|+||.++.+|.++ ||++++++.+ ..+ ...........+++.+.++...++
T Consensus 192 ~pl~-~----g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i--------~~~~~~~~~~~g~~~~~~~a~l~~~~L~--- 255 (386)
T PRK06767 192 RPLE-L----GCDAVVHSATKYIGGHGDVVAGVTICKTRAL--------AEKIRPMRKDIGGIMAPFDAWLLLRGLK--- 255 (386)
T ss_pred Cchh-c----CCcEEEecCcceecCCCCceeEEEEeChHHH--------HHHHHHHHHHhCCCCCHHHHHHHHcCCC---
Confidence 1221 1 12378889999998778885 8999988875 332 222222223345555444443333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc-CCee-ecC----------CCccEEEEECCCC--ChHHHHHHHHHcCCeEecCCC
Q 045431 335 FKAVHEVIGFYKENTDIIVETFNSL-GFKV-YGG----------KNAPYVWVQFPGR--SSWDVFSEILEKTHVVTTPGS 400 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~-~~~----------~~g~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~ 400 (433)
.+..+.++.+++...+.+.|+++ ++.. ..| ..|..+.+.+.+. ....++..+ +..++.+.-|.
T Consensus 256 --tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l-~~~~~~~s~G~ 332 (386)
T PRK06767 256 --TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL-HFITIAVSLGD 332 (386)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-CccEEecCCCC
Confidence 34556677889999999999988 6653 212 1234566667532 233444443 44566665554
Q ss_pred C
Q 045431 401 G 401 (433)
Q Consensus 401 ~ 401 (433)
.
T Consensus 333 ~ 333 (386)
T PRK06767 333 T 333 (386)
T ss_pred c
Confidence 3
No 194
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.89 E-value=8.2e-21 Score=184.60 Aligned_cols=356 Identities=8% Similarity=-0.002 Sum_probs=205.8
Q ss_pred HHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCC-CCCC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG-IEEG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~-~~~~ 127 (433)
.++......+++..||+..|.-. + ..++.+.+++.+++.+.. ...+. ....+.+..+|+.+.+..+ ...+
T Consensus 22 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~----~~~~~--~~~~~~~~~la~~l~~~~p~~~~~ 95 (420)
T TIGR00700 22 AEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFT----HTCFM--VTPYEGYVALAEKLNRIAPGSGPK 95 (420)
T ss_pred eeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhcc----Ccccc--ccCChHHHHHHHHHHHhCCCCCCC
Confidence 33444455667789999777432 2 367899999999997642 11111 0112223344444433122 1236
Q ss_pred cEEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcc-cccccccccceEEEeecCcc---------
Q 045431 128 DIFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTG-EFQKDAEKYGKIEYMRCTAE--------- 193 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~--------- 193 (433)
.+++++++++|+.. + ........+|+..+.+|++.......+ +... ....++.....+..++....
T Consensus 96 ~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (420)
T TIGR00700 96 KSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQ 175 (420)
T ss_pred EEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccc
Confidence 89999999999885 3 222334467888888898865444333 2110 00001111112222332100
Q ss_pred CCcc---cCCC-------CCCCccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc
Q 045431 194 NGFF---PDLS-------TVARTDIIFFCSP-NNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261 (433)
Q Consensus 194 ~~~~---~~~~-------~~~~~~~i~l~~p-~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~ 261 (433)
..+. ..++ ..+++.+|+ ..| +.-+|..++ .+.+++|.++|++||+++|+||+|.++.+.+.+..+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~iAavi-~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~ 254 (420)
T TIGR00700 176 LSTDGELAAARAIFVIDVGANNVAALV-IEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEH 254 (420)
T ss_pred hhHHHHHHHHHHHHHhhcCCCcEEEEE-ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhh
Confidence 0000 0011 113455554 456 666787664 55599999999999999999999998877664333333
Q ss_pred cCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHH
Q 045431 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHE 340 (433)
Q Consensus 262 ~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~ 340 (433)
+...+| +.+|||.++ +|+|+||++++++++ +.+.......+.+.++++|+++.+.++.... ...++
T Consensus 255 ~~~~pD----i~~lsK~l~-~G~pig~v~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~ 321 (420)
T TIGR00700 255 EGPEPD----LITTAKSLA-DGLPLSGVTGRAEIM--------DAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIER 321 (420)
T ss_pred cCCCCC----EEEeecccc-CCcceEEEEecHHHH--------hhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHH
Confidence 322233 456999998 999999999998875 3333333455667889999999776642111 11122
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CeeecCCCccEEEEECCCC----C----hHHHHHHHHHcCCeEecCCCCCCCCCCCeEE
Q 045431 341 VIGFYKENTDIIVETFNSLG-FKVYGGKNAPYVWVQFPGR----S----SWDVFSEILEKTHVVTTPGSGFGPGGEGFIR 411 (433)
Q Consensus 341 ~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~~~~~~~~~~----~----~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iR 411 (433)
..+.-+..++.+.+...+++ +..+.+ .|.++|+.+... . ...+...+ .++||.+.|+..|+ +++|
T Consensus 322 ~~~~g~~l~~~L~~l~~~~~~~~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~----~~lR 395 (420)
T TIGR00700 322 ARQIGRLVTDRLTTLKAVDPRIGDVRG-LGAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMFG----NIIR 395 (420)
T ss_pred HHHHHHHHHHHHHHHHhhCCCEEEeec-cceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCCC----CEEE
Confidence 22222222222222223333 333444 478888877311 1 12333333 45699999987663 6899
Q ss_pred Eee--ccChhHHHHHHHHHHHhhC
Q 045431 412 VSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 412 i~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
|++ ..+++++++++++|.++++
T Consensus 396 l~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 396 FLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EECCCCcCHHHHHHHHHHHHHHhh
Confidence 996 3589999999999998863
No 195
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=4.6e-21 Score=183.79 Aligned_cols=324 Identities=17% Similarity=0.136 Sum_probs=193.9
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccC-----CCCCCC----CCCCCCHHHHHHHHHHHhccCCCCCCcEEEc
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQ-----EGYSGY----GAEQGEKPLRAAIASTFYKDLGIEEGDIFVS 132 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~-----~~~~~Y----~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~ 132 (433)
.++|+|+++++ ++...+.+.+++.+++.++... .+..+. +...-..++++.+|+++ +.+ +.++++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~----~~~-~~l~~~ 78 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH----GAP-EAFIVP 78 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh----CCC-eEEEEC
Confidence 46899999987 6777888888888888765210 111111 12334677888888887 653 458888
Q ss_pred CChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC---C-CCccE
Q 045431 133 DGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST---V-ARTDI 208 (433)
Q Consensus 133 ~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~ 208 (433)
+|+...+.++..+.++||.|+++.-.|......++.... ..+.++..+-+.+...+.. . +++.+
T Consensus 79 sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 146 (370)
T PRK05937 79 SGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISG------------WHQSFRHNDLDHLESLLESCRQRSFGRIF 146 (370)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHhhhccCCCcEE
Confidence 888766655555667889999989899888777766531 1222332211111111111 1 23456
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
|++++++|+||.+.| +++|.++|+++|+++++|++|+..........+....+..+..+.+.||||.+|..| .|
T Consensus 147 v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~~- 220 (370)
T PRK05937 147 IFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--AA- 220 (370)
T ss_pred EEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--eE-
Confidence 667899999999999 788888899999999999999853332211111111111223367899999998667 33
Q ss_pred eeccccccccCCcchhHHHHHH-H-hhccCCCcHHHHHHHHHhc---CcCChhHHHHHHHHHHHHHHHHHHHHhhcCCee
Q 045431 289 TVIPKELLFSDGFPVAKDFNRI-V-CTCFNGASNISQAGGLACL---SPEGFKAVHEVIGFYKENTDIIVETFNSLGFKV 363 (433)
Q Consensus 289 l~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 363 (433)
++..++.. ..+... . .....+.+++...++.+++ .+.+ +..++++++.++++.+.|...+.
T Consensus 221 vl~~~~~~--------~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~----~~~~~~l~~l~~~l~~~l~~~~~-- 286 (370)
T PRK05937 221 LLSSSEVK--------QDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG----ELARKQLFRLKEYFAQKFSSAAP-- 286 (370)
T ss_pred EEcCHHHH--------HHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHhcCCCCC--
Confidence 34444432 222211 0 1111223444444333333 3222 34456777777777776653211
Q ss_pred ecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 364 YGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+....+.+++.....+...| .++||.+... + ....+.+|+++ +++++|++.+++.|++++
T Consensus 287 -----~~~~~i~~~~~~~~~~~~~L-~~~gi~v~~~--~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~ 348 (370)
T PRK05937 287 -----GCVQPIFLPGISEQELYSKL-VETGIRVGVV--C-FPTGPFLRVNLHAFNTEDEVDILVSVLATYL 348 (370)
T ss_pred -----CCEEEEEeCChhHHHHHHHH-HHCCeeEEee--C-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 11222445544444555554 5569988632 1 12346899996 579999999999998875
No 196
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.89 E-value=7e-21 Score=186.49 Aligned_cols=355 Identities=12% Similarity=0.077 Sum_probs=207.5
Q ss_pred HHHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC-
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE- 126 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~- 126 (433)
+..+......+++..||+..|.-. + ..+|.+.+++.+++.+... .....+ ..+.+..+|+.|....+...
T Consensus 42 ~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~-----~~~~~~~la~~L~~~~p~~~~ 115 (451)
T PRK06918 42 SANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH-TGFNVM-----MYEPYIELAEKLAALAPGSFD 115 (451)
T ss_pred eccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC-cccccc-----ccHHHHHHHHHHHHhCCCCCC
Confidence 344555556678889999777532 2 3678999999999875321 111111 12444555555544223222
Q ss_pred CcEEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCcc----CCcc
Q 045431 127 GDIFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAE----NGFF 197 (433)
Q Consensus 127 ~~i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~----~~~~ 197 (433)
+.+++++++++|... + ........+|+..+.+|++.......+ +....+ ..++.....+..+|.... .+..
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 589999999999886 3 222334467888888898865444333 211101 001111112222322100 0000
Q ss_pred c---------CC----CC--CCCccEEEEcCCCCcc-ccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc
Q 045431 198 P---------DL----ST--VARTDIIFFCSPNNPT-GAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 198 ~---------~~----~~--~~~~~~i~l~~p~nPt-G~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 260 (433)
. .+ .. .++..+.++..|.... |.++ +.+.+++|.++|++||+++|+||+|.++.+.+.+.++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~ 275 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIE 275 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhH
Confidence 0 00 00 1223344556785444 6645 55669999999999999999999999887766544444
Q ss_pred ccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcC---cCCh-h
Q 045431 261 EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS---PEGF-K 336 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~-~ 336 (433)
.++..+| +.||||.++ +|+|+||++++++++ +.+.......+.+.++++|.++.+.++ +... +
T Consensus 276 ~~~v~pD----i~t~sK~l~-~G~pig~v~~~~~i~--------~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~ 342 (451)
T PRK06918 276 HFDVVPD----LITVSKSLG-AGVPISGVIGRKEIM--------DESAPGELGGTYAGSPLGCAAALAVLDIIEKENLND 342 (451)
T ss_pred hcCCCCC----EEeeehhhc-CCCccEEEEEcHHHH--------hccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHH
Confidence 4443344 448999998 999999999998875 333333445566789999999776665 2222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-CeeecCCCccEEEEECCC----CC----hHHHHHHHHHcCCeEecCCCCCCCCCC
Q 045431 337 AVHEVIGFYKENTDIIVETFNSLG-FKVYGGKNAPYVWVQFPG----RS----SWDVFSEILEKTHVVTTPGSGFGPGGE 407 (433)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~~~~~~~~~----~~----~~~~~~~l~~~~gi~v~~g~~f~~~~~ 407 (433)
+++.+.+.+.++.+.+. .+++ +..+.+.++++.|..... .. ...+... +.++||.+.|+..|+
T Consensus 343 ~~~~~g~~l~~~l~~l~---~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~Gvlv~~~~~~~---- 414 (451)
T PRK06918 343 RAIELGKVVMNRFEEMK---NKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKE-ANKRGLLLLSAGTYG---- 414 (451)
T ss_pred HHHHHHHHHHHHHHHHH---hhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHH-HHHCCeEEeecCCCC----
Confidence 23333333332222222 2232 222445566666655411 11 1233333 345699999976553
Q ss_pred CeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 408 GFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 408 ~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+++||++ ..+++++++++++|.+++
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l 441 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESL 441 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 6899996 468999999999999876
No 197
>PLN02624 ornithine-delta-aminotransferase
Probab=99.89 E-value=3.2e-21 Score=189.39 Aligned_cols=347 Identities=9% Similarity=0.057 Sum_probs=208.8
Q ss_pred HHHHhcCCCCceEEecCCCCCC---CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEE
Q 045431 54 AAHMLKYPDAEVISLGIGDTTE---PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIF 130 (433)
Q Consensus 54 ~~~~~~~~~~~~i~l~~g~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~ 130 (433)
+......++...|||..|.... ..+|.+.+++.+++.+... ....+ ......+|.+.++++. + .+.++
T Consensus 66 G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~--~~~~~-~~~~~~~la~~L~~~~----~--~~~~~ 136 (474)
T PLN02624 66 GSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTL--SSRAF-YNDKFPEFAEYLTSMF----G--YDMVL 136 (474)
T ss_pred eCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCC--ccccc-CCHHHHHHHHHHHhhc----C--CCeEE
Confidence 3334445677889998775433 3589999999999986432 11122 2334556666666653 3 36888
Q ss_pred EcCChHHHHHHHHHhcC----------CCC-EEEEeCCCChhhhhhHHHhCCcc-cccccccccceEEEeecCccCCccc
Q 045431 131 VSDGAKCDISRLQIVFG----------SNV-TMAVQDPSYPAYVDSSVIMGQTG-EFQKDAEKYGKIEYMRCTAENGFFP 198 (433)
Q Consensus 131 ~~~G~~~al~~l~~l~~----------~gd-~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (433)
++++++++......+.+ ++. .|+...-+|.+............ ....++.....+..++.++...+..
T Consensus 137 f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 216 (474)
T PLN02624 137 PMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEK 216 (474)
T ss_pred EeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHH
Confidence 88888888875221211 133 57777777776543332222111 1111111112233444432111111
Q ss_pred CCCC-CCCccEEEEcCCCCccccCCCHH-HHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccc
Q 045431 199 DLST-VARTDIIFFCSPNNPTGAAATRE-QLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFS 276 (433)
Q Consensus 199 ~~~~-~~~~~~i~l~~p~nPtG~~~~~~-~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~s 276 (433)
.++. ..++.+|++..++|++|.+++.+ .+++|.++|++||+++|.||+|.++...+..... +..+.... +.++|
T Consensus 217 ~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~-~~~~i~pD---iv~ls 292 (474)
T PLN02624 217 IFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLAC-DWEEVRPD---VVILG 292 (474)
T ss_pred HHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhH-HhcCCCCC---EEEec
Confidence 1211 24577777778899999988766 5999999999999999999999876555542222 11122222 33478
Q ss_pred ccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHH
Q 045431 277 KYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETF 356 (433)
Q Consensus 277 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 356 (433)
|.+|.+++++|+++++++++ ..+.......+.+.+++.+.++.+.|+.... .++.++..++.+.+.+.|
T Consensus 293 K~lggG~~pigav~~~~~i~--------~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L 361 (474)
T PLN02624 293 KALGGGVIPVSAVLADKDVM--------LCIKPGEHGSTFGGNPLASAVAMAALQVVQD---EKLAERSAKLGQELRDQL 361 (474)
T ss_pred ccccCCCCcceeeeecHHHH--------hHhccCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHH
Confidence 99996669999999987764 3333333444556788999988888863211 233444555555565555
Q ss_pred hhcC------CeeecCCCccEEEEECCC-----CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHH
Q 045431 357 NSLG------FKVYGGKNAPYVWVQFPG-----RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLE 423 (433)
Q Consensus 357 ~~~g------~~~~~~~~g~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~ 423 (433)
+++. +..+.+ .|.++.+.+.. ....++...+ .++||.+.|+ +.+++||+ +..+++++++
T Consensus 362 ~~l~~~~~~~i~~vrg-~G~~~~i~l~~~~~~~~~a~~~~~~L-~e~GV~v~p~------~~~~lR~~p~l~~t~e~id~ 433 (474)
T PLN02624 362 QKIQKQFPKLIKEVRG-RGLLNAVVLNSPKLGPVSAYDVCLKL-KERGLLAKPT------HDTIIRLAPPLSISEDELQE 433 (474)
T ss_pred HHHHHhCCCceEEEEe-eEEEEEEEecCCCcChHHHHHHHHHH-HhCCeEEecC------CCCEEEEECCccCCHHHHHH
Confidence 5431 222333 34454454532 1234556555 5569999875 24789998 4679999999
Q ss_pred HHHHHHHhh
Q 045431 424 ACKRFKHLY 432 (433)
Q Consensus 424 ~l~~l~~~l 432 (433)
++++|++++
T Consensus 434 ~l~~L~~~l 442 (474)
T PLN02624 434 CSKALSDVL 442 (474)
T ss_pred HHHHHHHHH
Confidence 999998875
No 198
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-20 Score=182.81 Aligned_cols=353 Identities=11% Similarity=0.056 Sum_probs=214.7
Q ss_pred HHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC-CCCc
Q 045431 53 KAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI-EEGD 128 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~-~~~~ 128 (433)
.+......+++..+|+..|.. . -..+|.+.+++.+++.+... ..+. ....+....+++.+....+. ..+.
T Consensus 30 ~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~----~~~~--~~~~~~~~~la~~l~~~~p~~~~~~ 103 (421)
T PRK06777 30 ENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTH----TAYQ--IVPYASYVTLAERINALAPIDGPAK 103 (421)
T ss_pred ecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccc----cccc--ccCChHHHHHHHHHHHhCCCCCCce
Confidence 344445566778999977642 2 23678899999999876421 1111 01122333444444332232 2468
Q ss_pred EEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCc-ccccccccccceEEEeecCccC-Cc-----c
Q 045431 129 IFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQT-GEFQKDAEKYGKIEYMRCTAEN-GF-----F 197 (433)
Q Consensus 129 i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~-~~-----~ 197 (433)
+++++++++|... + ........+|+..+.+|++.......+ +.. .....++.....+..++..... +. .
T Consensus 104 ~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 183 (421)
T PRK06777 104 TAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEAL 183 (421)
T ss_pred EEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHH
Confidence 9999999999885 3 222334467888888888875444332 211 1101111111122222222110 00 0
Q ss_pred cCCCC-------CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcc
Q 045431 198 PDLST-------VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEV 268 (433)
Q Consensus 198 ~~~~~-------~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 268 (433)
..+++ ..++.+|++ .| ++..|. +++.+.+++|.++|++||+++|.||+|.++.+.+.+.....++..+|
T Consensus 184 ~~l~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD- 261 (421)
T PRK06777 184 SSVERLFKADIAPDQVAAILL-EPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD- 261 (421)
T ss_pred HHHHHHHHhccCCCceEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC-
Confidence 00111 134555554 55 777885 57899999999999999999999999998866665433333432344
Q ss_pred eEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHH
Q 045431 269 AIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKEN 348 (433)
Q Consensus 269 vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 348 (433)
+ .++||.++ +|+|+||++++++++ +.+.......+.+.++++++++.+.|+.... +++.++++++
T Consensus 262 i---v~~sK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~ 326 (421)
T PRK06777 262 L---ITMAKSLG-GGMPISAVVGRAEVM--------DAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALIL 326 (421)
T ss_pred E---Eeeehhhc-CCCceEEEEEcHHHH--------hccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHH
Confidence 2 27999998 999999999998875 3333233445666899999999999863221 4566777788
Q ss_pred HHHHHHHHhhc----C-CeeecCCCccEEE-EECC--CCChH----HHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--
Q 045431 349 TDIIVETFNSL----G-FKVYGGKNAPYVW-VQFP--GRSSW----DVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA-- 414 (433)
Q Consensus 349 ~~~l~~~l~~~----g-~~~~~~~~g~~~~-~~~~--~~~~~----~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~-- 414 (433)
.+++.+.|+++ + +..+.+.+.++.+ +..+ +.... .+...+ .++||.+.|+..|+ +++||+.
T Consensus 327 g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~~~~g----~~lr~~ppl 401 (421)
T PRK06777 327 GAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQA-LEEGLLLLSCGVHG----NVIRFLYPL 401 (421)
T ss_pred HHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHH-HhCCeEEeecCCCC----CEEEEeCCC
Confidence 88888877764 2 2334555555432 3222 11122 233333 45699999986553 5899995
Q ss_pred ccChhHHHHHHHHHHHhhC
Q 045431 415 FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 415 ~~~~~~l~~~l~~l~~~l~ 433 (433)
..+++++++++++|.+++.
T Consensus 402 ~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 402 TIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 6799999999999998763
No 199
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.7e-20 Score=179.41 Aligned_cols=222 Identities=14% Similarity=0.198 Sum_probs=156.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCccccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQ 176 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 176 (433)
+..|+ ......|++++|++. +. +++++++|+++++.+ +..++++||+|++++|+|++....+......+.
T Consensus 46 Y~R~~-~pt~~~L~~~lA~l~----g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g-- 116 (386)
T PRK08045 46 YSRRG-NPTRDVVQRALAELE----GG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC-- 116 (386)
T ss_pred eeCCC-CccHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC--
Confidence 45663 456789999999986 42 469999999999997 577899999999999999975544443321111
Q ss_pred ccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 177 KDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.++..++..+...+...+ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 117 ------i~v~~vd~~d~e~l~~~l--~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~--- 182 (386)
T PRK08045 117 ------YRVLFVDQGDEQALRAAL--AEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ--- 182 (386)
T ss_pred ------eEEEEeCCCCHHHHHHhc--ccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 244444321111111111 257899999999999999998 678888899999999999999854321
Q ss_pred CcccccCCCCcceEEEeccccccc-ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAG-FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF 335 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 335 (433)
.++ .. + .| +++.|++|.++ .++.+.|+++++++.+ .+.+...........+++.+..+...|+.
T Consensus 183 ~pl-~~-g-aD--ivv~S~tK~l~G~~d~~~G~vi~~~~~~-------~~~l~~~~~~~g~~~~p~~~~l~~rgl~t--- 247 (386)
T PRK08045 183 NPL-AL-G-AD--LVLHSCTKYLNGHSDVVAGVVIAKDPDV-------VTELAWWANNIGVTGGAFDSYLLLRGLRT--- 247 (386)
T ss_pred Cch-hh-C-CC--EEEeecceeccCCCCceeEEEEeCcHHH-------HHHHHHHHHhcCCCCCHHHHHHHHhhhcc---
Confidence 222 12 1 12 88999999885 4567789988753322 35555555555556788888777766653
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 336 KAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+..+.++..+++..+.+.|+++
T Consensus 248 --l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 248 --LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcC
Confidence 5777888889999999999987
No 200
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.89 E-value=1.1e-20 Score=180.84 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=184.1
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHH----HhCCcccccc
Q 045431 103 AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSV----IMGQTGEFQK 177 (433)
Q Consensus 103 ~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~ 177 (433)
......+|++.++++. +. +..++++++++|+.+ +..++++||+|+++.++|.+....+. ..|
T Consensus 38 ~~p~~~~le~~la~l~----g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g------- 104 (369)
T cd00614 38 GNPTVDALEKKLAALE----GG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLG------- 104 (369)
T ss_pred CChhHHHHHHHHHHHH----CC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcC-------
Confidence 4556789999999986 43 456666777888886 67888999999999999988765443 334
Q ss_pred cccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 178 DAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
.++..++.++.+.+...+ .+++++|++.+|+||+|.+.+ +++|.++|++||+++|+|++|+..... .
T Consensus 105 -----~~~~~v~~~d~~~l~~~i--~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~---~ 171 (369)
T cd00614 105 -----IEVTFVDPDDPEALEAAI--KPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ---R 171 (369)
T ss_pred -----eEEEEeCCCCHHHHHHhc--CCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC---C
Confidence 366666654211221112 247899999999999999988 788999999999999999999853321 1
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccc-cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPK-ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF 335 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 335 (433)
++ .+ +..+++.|+||.++.+| .+.||+++++ +++ +.+...........+++.+.++...++
T Consensus 172 ~~-~~----g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~--------~~l~~~~~~~g~~~~p~~a~~~l~~l~---- 234 (369)
T cd00614 172 PL-EL----GADIVVHSATKYIGGHSDVIAGVVVGSGEALI--------QRLRFLRLALGTILSPFDAWLLLRGLK---- 234 (369)
T ss_pred hh-hh----CCcEEEeccceeccCCCCceEEEEEeCcHHHH--------HHHHHHHHhhCCCCCHHHHHHHHcCCC----
Confidence 11 11 23488999999997555 7899999987 553 555554443444466666665555553
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-CCe-eecC----------------CCccEEEEECCCCChHHHHHHHHHcCCeEe-
Q 045431 336 KAVHEVIGFYKENTDIIVETFNSL-GFK-VYGG----------------KNAPYVWVQFPGRSSWDVFSEILEKTHVVT- 396 (433)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v- 396 (433)
.+..+.++..++.+.+.+.|+++ ++. +..| ..|..+.+.+.+ + .+....+++.-.+.-
T Consensus 235 -tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~-~~~~~~f~~~l~~~~~ 311 (369)
T cd00614 235 -TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-G-LEAAKKFLNALKLFSL 311 (369)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-C-HHHHHHHHHcCCcceE
Confidence 23556777788999999999987 343 2222 235567777753 2 233334444433331
Q ss_pred --cCCCCCC---------------------CCCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 397 --TPGSGFG---------------------PGGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 397 --~~g~~f~---------------------~~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.-|.... .-.++.+|||++. |+.+.+++.|.+++
T Consensus 312 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al 368 (369)
T cd00614 312 AVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL 368 (369)
T ss_pred cccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 1111110 0114689999866 45666666666665
No 201
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.88 E-value=7.1e-21 Score=184.60 Aligned_cols=343 Identities=8% Similarity=0.070 Sum_probs=210.2
Q ss_pred cCCCCceEEecCCCCCCC---ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 59 KYPDAEVISLGIGDTTEP---IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 59 ~~~~~~~i~l~~g~~~~~---~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
..++...||+..+..... .+|.+.+++.+.+.+... ....+ ......+|.+.+++++ + .+.+++++++
T Consensus 33 ~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~--~~~~~-~~~~~~~l~~~l~~~~----~--~~~~~~~~SG 103 (401)
T TIGR01885 33 DVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL--SSRAF-YNDVFGEFAEYVTKLF----G--YDKVLPMNTG 103 (401)
T ss_pred eCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc--ccccc-CCHHHHHHHHHHHhhc----C--CCEEEEeCcc
Confidence 345678999988754433 489999999998876431 11112 2233456666666654 4 3578888888
Q ss_pred HHHHHH-HHHh---------cCC-CCEEEEeCCCChhh-hhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-
Q 045431 136 KCDISR-LQIV---------FGS-NVTMAVQDPSYPAY-VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST- 202 (433)
Q Consensus 136 ~~al~~-l~~l---------~~~-gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (433)
++++.. +..+ +.+ .+.|+..+-+|.+. ...+...+.......++.....+..++.++...+...++.
T Consensus 104 s~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 183 (401)
T TIGR01885 104 AEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDH 183 (401)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhc
Confidence 888775 4322 123 46778888888763 3333333311100011111123344444321111111211
Q ss_pred CCCccEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc
Q 045431 203 VARTDIIFFCSPNNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF 281 (433)
Q Consensus 203 ~~~~~~i~l~~p~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~ 281 (433)
.+++.+|++..+++++|...+ .+.+++|.++|++||+++|+||+|..+.+.+.+... +..+..+.++ ++||.++.
T Consensus 184 ~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~-~~~~~~~di~---~~gK~l~~ 259 (401)
T TIGR01885 184 GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCV-DHENVKPDIV---LLGKALSG 259 (401)
T ss_pred CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHH-hhcCCCCCEE---EeeccccC
Confidence 135566665566999999886 447999999999999999999999876655543322 2222222233 46899985
Q ss_pred cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 045431 282 TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF 361 (433)
Q Consensus 282 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 361 (433)
+++|+|+++++++++ +.+.......+.+.+++++.++.+.|+.... +.+.++.++..+++.+.|++++.
T Consensus 260 g~~~ig~v~~~~~i~--------~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~---~~l~~~~~~~~~~~~~~L~~l~~ 328 (401)
T TIGR01885 260 GVYPVSAVLADDDVM--------LTIKPGEHGSTYGGNPLACAVAVAALEVLEE---EKLAENAEKLGEIFRDQLKKLPK 328 (401)
T ss_pred CCCCcEEEEEcHHHH--------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhccC
Confidence 558999999998875 3333212223445678889888888863322 23445677778889999988743
Q ss_pred ee---ecCCCccEEEEECCCC----ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 362 KV---YGGKNAPYVWVQFPGR----SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 362 ~~---~~~~~g~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+ ..+ .|.+..+.++.. ...++...+. ++||.+.|+ +++.+||+. ..+++++++++++|++++
T Consensus 329 ~~~~~~~g-~g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 329 PIITEVRG-RGLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPT------HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CceeEEee-cCeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEec------CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 33 223 344444444421 3455666665 559999764 246899995 569999999999999887
Q ss_pred C
Q 045431 433 K 433 (433)
Q Consensus 433 ~ 433 (433)
.
T Consensus 401 ~ 401 (401)
T TIGR01885 401 D 401 (401)
T ss_pred C
Confidence 4
No 202
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2.7e-20 Score=179.01 Aligned_cols=221 Identities=18% Similarity=0.191 Sum_probs=148.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhC-Ccccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMG-QTGEF 175 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~ 175 (433)
+..|+ ......|++.+|++. +. ++++++++| ++++.+ +..++++||+|+++.|+|++....+.... ..+
T Consensus 54 y~R~~-~p~~~~Le~~lA~l~----g~-~~~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g-- 124 (405)
T PRK08776 54 YTRSG-NPTRDLLGEALAELE----GG-AGGVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH-- 124 (405)
T ss_pred ccCCC-ChHHHHHHHHHHHHh----CC-CceEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC--
Confidence 34443 234577888888875 54 456666665 688887 57789999999999999987443333221 111
Q ss_pred cccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
..++.++..+...+...+ .+++++|++++|+||||.+.+ +++|+++|+++|++||+|++|+....
T Consensus 125 -------~~v~~v~~~d~~~l~~~i--~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~--- 189 (405)
T PRK08776 125 -------FALITADLTDPRSLADAL--AQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL--- 189 (405)
T ss_pred -------cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc---
Confidence 255566543211221111 257899999999999999866 88999999999999999999984211
Q ss_pred CCcccccCCCCcceEEEeccccccccc-ccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG 334 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 334 (433)
..++ .+ + ..+++.|.+|.++.+ ++..|+++++++.+ .+++...........+++.+.++.. +
T Consensus 190 ~~pl-~~-g---aDivv~S~tK~l~g~~~~~~G~vv~~~~~l-------~~~l~~~~~~~g~~~s~~~a~l~~~-----g 252 (405)
T PRK08776 190 QKPL-EF-G---ADLVLHSTTKYINGHSDVVGGAVVARDAEL-------HQQLVWWANALGLTGSPFDAFLTLR-----G 252 (405)
T ss_pred CCcc-cc-c---CCEEEecCceeecCCCCceEEEEEeCCHHH-------HHHHHHHHHhcCCCCCHHHHHHHHh-----h
Confidence 1222 12 1 128899999999744 46789888764433 3455444433333456666655443 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 335 FKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.++++.+.++..++...+.+.|+++
T Consensus 253 l~tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 253 LRTLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 3567888889999999999999886
No 203
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.88 E-value=2.9e-20 Score=183.14 Aligned_cols=334 Identities=13% Similarity=0.100 Sum_probs=216.8
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCC---CCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH---
Q 045431 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGY---GAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR--- 141 (433)
Q Consensus 68 l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y---~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~--- 141 (433)
++.|+++...|+.+.+++.+.... ..++.| ....|..+++.++.+++++..+.+...+..++|+.+.+..
T Consensus 73 ~g~G~~~~~~~p~i~~~~~~~~~~----~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 73 YPLGSCTMKYNPKINEKVARLPGF----AELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLM 148 (481)
T ss_pred ecCcccCCCCCHHHHHHHHhCcch----hcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHH
Confidence 677877788899888888875221 345667 3467999999999999988667665566666777766553
Q ss_pred HH-HhcCCCC----EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcC
Q 045431 142 LQ-IVFGSNV----TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCS 213 (433)
Q Consensus 142 l~-~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~ 213 (433)
+. .++++|| +|++++|+|+.+...+...| .+++.++.+.++..+.+ ++. .+++++|++++
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G------------~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~ 216 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAG------------FKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTN 216 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcC------------CEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeC
Confidence 22 3457776 99999999999998888888 47888887543322222 221 35788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccc----ccceeee
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT----GVRLGWT 289 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~----G~r~G~l 289 (433)
|+ |||.. .+++++|+++|+++|+++++|.++..... + ..+...+ +..++++|.+|+++.| |..+|++
T Consensus 217 Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g-~~~~~~~----GaD~~~~~~hK~l~~P~g~Ggp~~G~l 287 (481)
T PRK04366 217 PN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAIL-G-KARPGDM----GFDVVHLNLHKTFSTPHGGGGPGSGPV 287 (481)
T ss_pred CC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhc-c-cCCcccc----CCCEEEEechhhcCCCCCCCCCCeeee
Confidence 98 99964 35699999999999999999999862211 1 1111122 2348899999998643 4457888
Q ss_pred eccccccccCCcchh--------------HHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHH
Q 045431 290 VIPKELLFSDGFPVA--------------KDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (433)
.+++.+.......+. +.+++.+. ...+.+...++..++...+.+.+++..++...+.+++.+.
T Consensus 288 ~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a---~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~ 364 (481)
T PRK04366 288 GVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRA---FYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKAR 364 (481)
T ss_pred eehhhhHhhCCCCeeeccCCceeecccccccCCCccc---ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887765421100000 00011111 1123344455556665555566777778888889999999
Q ss_pred HhhcCCeeecCCCc-cEEEEEC-----CCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHH
Q 045431 356 FNSLGFKVYGGKNA-PYVWVQF-----PGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKR 427 (433)
Q Consensus 356 l~~~g~~~~~~~~g-~~~~~~~-----~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~ 427 (433)
|+++ +.+..+... .-+.+.+ ++.+..++.++|.++ ||.+. +..|.....+.+|+++ +.+.+||+.+++.
T Consensus 365 L~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~-Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~ 441 (481)
T PRK04366 365 LKDI-YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDY-GFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAA 441 (481)
T ss_pred hHhh-CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHC-CccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHH
Confidence 9886 333221111 1133332 234566777777654 99865 2222112256899996 5689999999999
Q ss_pred HHHhh
Q 045431 428 FKHLY 432 (433)
Q Consensus 428 l~~~l 432 (433)
|+++.
T Consensus 442 l~~i~ 446 (481)
T PRK04366 442 MKQIA 446 (481)
T ss_pred HHHHH
Confidence 98764
No 204
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=3.4e-20 Score=178.45 Aligned_cols=252 Identities=14% Similarity=0.127 Sum_probs=158.4
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
++|.++.+.. ++.+..+.+.... .. ....+..| +..-..+|++.+|++. +++.. + ++++++.++.. +
T Consensus 30 ~pi~~~~~~~-~~~~~~~~~~~~~---~~-~~~~y~r~-~~p~~~~Le~~lA~l~----G~~~~-~-~~~sG~~Ai~~~l 97 (398)
T PRK07504 30 EALFLTQGFV-YDTAEAAEARFKG---ED-PGFIYSRY-SNPTVDMFEKRMCALE----GAEDA-R-ATASGMAAVTAAI 97 (398)
T ss_pred CCeECCCCcc-CCCHHHHHHHhcc---Cc-CCceeecC-CCchHHHHHHHHHHHh----CCCee-e-EecCHHHHHHHHH
Confidence 3577777654 2344444332211 11 00123355 3446789999999987 66543 3 45566667665 6
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccC
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~ 221 (433)
..++++||+|+++.|.|+++...+... ...+ .++..++..+...+...+ .+++++|++++|+||||.+
T Consensus 98 ~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G---------~~v~~vd~~d~e~l~~ai--~~~tklV~lesp~NptG~v 166 (398)
T PRK07504 98 LCQVKAGDHVVAARALFGSCRYVVETLLPRYG---------IESTLVDGLDLDNWEKAV--RPNTKVFFLESPTNPTLEV 166 (398)
T ss_pred HHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC---------eEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCcEe
Confidence 778899999999999999876554322 1111 255555421111111111 3689999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee-eeeccccccccCC
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG-WTVIPKELLFSDG 300 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G-~l~~~~~~~~~~~ 300 (433)
++ +++|.++|+++|+++|+|++|+..... .++ .+ +..+++.|+||.++.+|+++| +++++++.+
T Consensus 167 ~d---l~~I~~la~~~gi~lvvD~a~a~~~~~---~~~-~~----gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i---- 231 (398)
T PRK07504 167 ID---IAAVAKIANQAGAKLVVDNVFATPLFQ---KPL-EL----GAHIVVYSATKHIDGQGRCLGGVVLSDKAWI---- 231 (398)
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccccC---Cch-hh----CCCEEEeeccccccCCccceEEEEEeCcHHH----
Confidence 98 788888899999999999999854332 111 22 234889999999988899996 666666654
Q ss_pred cchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CC
Q 045431 301 FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GF 361 (433)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 361 (433)
.+.+...........+++.+..+.+.++ .+..+.++..++...+.+.|+++ ++
T Consensus 232 ---~~~~~~~~~~~g~~~s~~~A~~~l~~L~-----tl~~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 232 ---EEHLQDYFRHTGPSLSPFNAWTLLKGLE-----TLPVRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred ---HHHHHHHHHHhCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 1233333333333445555444444333 35666667778888899999886 44
No 205
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=3.6e-20 Score=178.55 Aligned_cols=346 Identities=10% Similarity=0.088 Sum_probs=211.5
Q ss_pred HHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
++......+++..||+..|.. .+ ..+|.+.+++.+++.+... .. .. -..+....+++.|....+. .+.+
T Consensus 30 ~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~---~~-~~~~~~~~la~~L~~~~~~-~~~v 101 (408)
T PRK04612 30 QGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWH---TS---NV-FYSAPPLKLAEELVTASRF-AEKV 101 (408)
T ss_pred eeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc---cc---cc-cCCHHHHHHHHHHHhhCCC-CCEE
Confidence 344445567788999977643 22 3688999999998875321 11 11 1123344555555432221 2689
Q ss_pred EEcCChHHHHHH-HH---Hhc---C--C-CCEEEEeCCCChhhhhhHHHhCCccccc-ccccccceEEEeecCccCCccc
Q 045431 130 FVSDGAKCDISR-LQ---IVF---G--S-NVTMAVQDPSYPAYVDSSVIMGQTGEFQ-KDAEKYGKIEYMRCTAENGFFP 198 (433)
Q Consensus 130 ~~~~G~~~al~~-l~---~l~---~--~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 198 (433)
++++++++|... +. ... . + ..+|+..+.+|++.............+. .+......+..++.++...+..
T Consensus 102 ~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 181 (408)
T PRK04612 102 FLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEA 181 (408)
T ss_pred EEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHH
Confidence 999999999885 31 111 1 1 2468888888888654333222111110 0110011222333221111111
Q ss_pred CCCCCCCccEEEEcCCCCccccCCC--HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccc
Q 045431 199 DLSTVARTDIIFFCSPNNPTGAAAT--REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFS 276 (433)
Q Consensus 199 ~~~~~~~~~~i~l~~p~nPtG~~~~--~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~s 276 (433)
.+. .+..+.+++.|.+++|.+++ .+.+++|.++|++||+++|+||+|..+...+.+. ... ..+.+..+.|||
T Consensus 182 ~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~--a~~--~~~~~pdi~t~~ 255 (408)
T PRK04612 182 AMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF--AHW--QEQVTPDIVTLA 255 (408)
T ss_pred hhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh--hhh--hcCCCCCEEEEc
Confidence 111 23455667789888886665 6789999999999999999999999876654322 111 123456688999
Q ss_pred ccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHH
Q 045431 277 KYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETF 356 (433)
Q Consensus 277 K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 356 (433)
|.++ +|+|+||++++++++ +.+.......+.+.+++++.++.+.|+.... +++.++.+++.+++.+.|
T Consensus 256 K~l~-~G~piga~~~~~~~~--------~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l 323 (408)
T PRK04612 256 KALG-GGFPIGAMLAGPKVA--------ETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGL 323 (408)
T ss_pred chhc-CCCceEEEEECHHHH--------hhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHH
Confidence 9998 999999999987764 3333333444556789999999988863221 345666677777777777
Q ss_pred hhc----CC-eeecCCCccEEEEECCCC---ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHH
Q 045431 357 NSL----GF-KVYGGKNAPYVWVQFPGR---SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACK 426 (433)
Q Consensus 357 ~~~----g~-~~~~~~~g~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~ 426 (433)
+++ ++ ..+.+ .|.++.+.+... ....+...+ .++||.+.+. +.+.+|+. +..++++++++++
T Consensus 324 ~~l~~~~~~i~~vrg-~Gl~~~i~~~~~~~~~a~~i~~~l-~~~Gvlv~~~------g~~~lRl~Ppl~it~eeid~~l~ 395 (408)
T PRK04612 324 EALNAEFGVFAQVRG-RGLMLGAVLAPAHAGQAGAILDLA-AEHGLLLLQA------GPDVLRFVPALNLTDAELADGLA 395 (408)
T ss_pred HHHHhhCCCeeeeec-cceEEEEEecCchhhHHHHHHHHH-HHCCeEEeeC------CCCEEEEcCCccCCHHHHHHHHH
Confidence 664 22 12232 466666666421 233444444 4569999763 34789998 5669999999999
Q ss_pred HHHHhh
Q 045431 427 RFKHLY 432 (433)
Q Consensus 427 ~l~~~l 432 (433)
+|.+++
T Consensus 396 ~l~~~l 401 (408)
T PRK04612 396 RLRLAL 401 (408)
T ss_pred HHHHHH
Confidence 998876
No 206
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=2.9e-20 Score=180.17 Aligned_cols=352 Identities=11% Similarity=0.027 Sum_probs=209.3
Q ss_pred HHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-CC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-EG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~~ 127 (433)
.++......+++..||+..|.. . -..+|.+.+++.+++.+... ....+.+ .+....+++.+....+-. .+
T Consensus 29 ~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~----~~~~~~la~~l~~~~p~~~~~ 102 (425)
T PRK07495 29 AENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH--TCHQVVP----YENYVRLAERLNALVPGDFAK 102 (425)
T ss_pred eeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC--cccCccC----CHHHHHHHHHHHHhCCCCCCC
Confidence 4444455667788999977743 2 23688899999999876421 1111112 233344555544322322 26
Q ss_pred cEEEcCChHHHHHH-HH--HhcCCCCEEEEeCCCChhhhhhHHHh-CCc-ccccccccccceEEEeecCccC-Ccc----
Q 045431 128 DIFVSDGAKCDISR-LQ--IVFGSNVTMAVQDPSYPAYVDSSVIM-GQT-GEFQKDAEKYGKIEYMRCTAEN-GFF---- 197 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l~--~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~-~~~---- 197 (433)
.+++++++++|... +. .......+|+..+.+|++.......+ +.. .....++.....+..+|..... +..
T Consensus 103 ~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 182 (425)
T PRK07495 103 KTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQS 182 (425)
T ss_pred EEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHH
Confidence 89999999999886 31 22344567888888898865333222 211 1111112112234445443211 110
Q ss_pred ----cC-CC---CCCCccEEEEc-CCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCc
Q 045431 198 ----PD-LS---TVARTDIIFFC-SPNNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKE 267 (433)
Q Consensus 198 ----~~-~~---~~~~~~~i~l~-~p~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 267 (433)
.. +. ...++.+|++. ..+| +| ..+|.+.+++|.++|++||+++|+||+|.++...+.+...... +
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~----g 257 (425)
T PRK07495 183 LAALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHH----E 257 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeeccc----C
Confidence 00 11 11346666654 2255 78 4579999999999999999999999999987665543222112 2
Q ss_pred ceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHH
Q 045431 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKE 347 (433)
Q Consensus 268 ~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 347 (433)
.+..+.||||.++ +|+++|+++++++++ +.+.......+++.++++++++.+.++.... ..+.++.++
T Consensus 258 v~pDi~tlsK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l~~~~~~ 325 (425)
T PRK07495 258 VAADLTTMAKGLA-GGFPLAAVTGRAEIM--------DAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE---EDLCERANQ 325 (425)
T ss_pred CCCCEEeehhhhc-CCccceEEEEcHHHH--------hccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---chHHHHHHH
Confidence 3345789999998 999999999998875 2232223345667889999976666652111 223344444
Q ss_pred HHHHHHHHHhhc----C-CeeecCCCccEEEEECCCCC--------hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe-
Q 045431 348 NTDIIVETFNSL----G-FKVYGGKNAPYVWVQFPGRS--------SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS- 413 (433)
Q Consensus 348 ~~~~l~~~l~~~----g-~~~~~~~~g~~~~~~~~~~~--------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~- 413 (433)
+.+.+.+.|+++ . +.-+.. .|+++|+.+.... ...+...++ ++|+.+.+.. . ..+.+||.
T Consensus 326 ~g~~l~~~L~~l~~~~~~i~~vrG-~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g---~-~~~~~r~~P 399 (425)
T PRK07495 326 LGNRLKQRLASLRETVPEIADIRG-PGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCG---V-HGNVIRFLA 399 (425)
T ss_pred HHHHHHHHHHHHHhhCCCeeeeec-CceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecC---C-CCCEEEEeC
Confidence 444554444432 2 211222 4899999985211 123444444 5699996532 1 13679999
Q ss_pred -eccChhHHHHHHHHHHHhh
Q 045431 414 -AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 414 -~~~~~~~l~~~l~~l~~~l 432 (433)
+..+++++++++++|.+++
T Consensus 400 pl~it~~~id~~~~~l~~~l 419 (425)
T PRK07495 400 PITIQDDVFAEALDILEASI 419 (425)
T ss_pred CCccCHHHHHHHHHHHHHHH
Confidence 5679999999999999876
No 207
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.1e-20 Score=173.32 Aligned_cols=349 Identities=12% Similarity=0.106 Sum_probs=233.7
Q ss_pred HHHHHHHhcCCCCceEEecCCC--CCC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGD--TTE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
++.+....+.++...|||..|. ..+ ..+|.+.+++.+++.+.. .....| ..+.+.++++.|.+..+ ..+
T Consensus 30 ~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~--h~sn~~-----~~~~~~~la~~L~~~s~-~~d 101 (404)
T COG4992 30 RGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLW--HVSNLF-----YNEPQAELAEKLVELSP-FAD 101 (404)
T ss_pred eccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhh--hccccc-----CChHHHHHHHHHHhhCc-ccc
Confidence 3444555566778899986664 333 478999999999888753 112223 23555666666654334 589
Q ss_pred cEEEcCChHHHHHH-H---HHhcC-C-CCEEEEeCCCChhhhhhHHHhCCcc-cccccccccceEEEeecCccCCcccCC
Q 045431 128 DIFVSDGAKCDISR-L---QIVFG-S-NVTMAVQDPSYPAYVDSSVIMGQTG-EFQKDAEKYGKIEYMRCTAENGFFPDL 200 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l---~~l~~-~-gd~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (433)
.|+++|++++|++. + ..... + ..+|+....+|++-......++.+. ....+++....+..+|.++-+.+...+
T Consensus 102 ~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai 181 (404)
T COG4992 102 RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAI 181 (404)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHh
Confidence 99999999999986 3 22222 2 2477777777776433333333222 223334444455666654322221112
Q ss_pred CCCCCccEEEEcCCCCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc
Q 045431 201 STVARTDIIFFCSPNNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA 279 (433)
Q Consensus 201 ~~~~~~~~i~l~~p~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~ 279 (433)
.+++.+|++---+.-.|+.. +++.++++.++|++||+++|.||++.++...|.......+.-.+| |-++.|.+
T Consensus 182 --~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PD----I~tlaK~L 255 (404)
T COG4992 182 --DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPD----ILTLAKAL 255 (404)
T ss_pred --ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCC----EEEeeccc
Confidence 24777766543388888665 566889999999999999999999999888776544444433345 33689999
Q ss_pred cccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 280 GFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 280 ~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
| .|+++|.+++.+... +.+....+.++.+.++++.+++.+.++-... +.+.+..+++.+++.+.|+++
T Consensus 256 g-GG~PigA~la~~~~~--------~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l 323 (404)
T COG4992 256 G-GGFPIGAMLATEEIA--------SAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLREL 323 (404)
T ss_pred c-CCccceeeEEchhhh--------hcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHH
Confidence 8 999999999984432 3455566778889999999999988874333 556666777778888888775
Q ss_pred --CCeeecC--CCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 360 --GFKVYGG--KNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 360 --g~~~~~~--~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
.+.+... ..|+++-+.+... ...++...+.++ |+.+.+. +++.+|+. +..+++++++++++|++++
T Consensus 324 ~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a------~~~ViR~~PpL~i~~eei~~~~~~l~~~l 396 (404)
T COG4992 324 KRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREE-GVLVLPA------GPNVIRFLPPLVITEEEIDEALDALERAL 396 (404)
T ss_pred hhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHC-CeEEecC------CCCeEEecCCccCCHHHHHHHHHHHHHHH
Confidence 2222222 2467777777643 356777776655 9999864 35689999 5779999999999999876
No 208
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=1.4e-19 Score=176.16 Aligned_cols=349 Identities=11% Similarity=0.072 Sum_probs=210.8
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.- .+ ..++.+.+++.+++.+... ....| ...+.+.++|+.|....+..-+.
T Consensus 30 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~----~~~~~~~~la~~L~~~~p~~~~~ 103 (443)
T PRK08360 30 AENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH--YTPIY----GFPVEPLLLAEKLIEIAPGDNPK 103 (443)
T ss_pred cceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC--ccccc----cCcHHHHHHHHHHHHhCCCCCCE
Confidence 3444455567788999977742 22 3689999999999875321 11112 22344555666654423333368
Q ss_pred EEEcCChHHHHHHHHH---hcCCCCEEEEeCCCChhhhhhHHHh-CCccc-ccccccccceEEEeecCccCC--c-----
Q 045431 129 IFVSDGAKCDISRLQI---VFGSNVTMAVQDPSYPAYVDSSVIM-GQTGE-FQKDAEKYGKIEYMRCTAENG--F----- 196 (433)
Q Consensus 129 i~~~~G~~~al~~l~~---l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~--~----- 196 (433)
+++++++++|+..... ......+|+....+|++........ +.... ...++. ...+..++...... +
T Consensus 104 v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 182 (443)
T PRK08360 104 VSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCYRCPFGKEPG 182 (443)
T ss_pred EEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccccccccCchh
Confidence 9999999999986322 2344567888888887764332222 21111 111111 12233333321000 0
Q ss_pred ---------ccC-CCC---CCCccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc
Q 045431 197 ---------FPD-LST---VARTDIIFFCSP-NNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261 (433)
Q Consensus 197 ---------~~~-~~~---~~~~~~i~l~~p-~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~ 261 (433)
..+ ++. ..++.+|++ .| +||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+.+.....
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~iAAvi~-eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~ 261 (443)
T PRK08360 183 SCKMECVEYIKEKFEGEVYAEGVAALFA-EPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEH 261 (443)
T ss_pred hhHHHHHHHHHHHHHhccCCCCeEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhh
Confidence 000 111 145777665 56 799999887 55799999999999999999999998766654332222
Q ss_pred cCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHH
Q 045431 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEV 341 (433)
Q Consensus 262 ~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 341 (433)
+.-.+| ++ ++||.++ +|+|+||++++++++ +.+.......+.+.+++.+.++.+.++.... +.+
T Consensus 262 ~~~~pD-ii---tlsK~l~-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~---~~l 325 (443)
T PRK08360 262 FGVEPD-II---TLGKPLG-GGLPISATIGRAEIM--------DSLPPLAHAFTLSGNPVASAAALAVIEEIEE---KNL 325 (443)
T ss_pred cCCCCC-EE---Eeccccc-CCceeEEEEEcHHHH--------hhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCH
Confidence 222233 33 7799998 999999999998874 4443333444566788889888888874222 234
Q ss_pred HHHHHHHHHHHHHHHhhc----CC-eeecCCCccEEEEECCCC---------ChHHHHHHHHHcCCeEecCCCCCCCCCC
Q 045431 342 IGFYKENTDIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR---------SSWDVFSEILEKTHVVTTPGSGFGPGGE 407 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~f~~~~~ 407 (433)
.++.+++.+++.+.|+++ ++ ..+.+ .|.++-+.+... ....+...++ ++||.+.+. ..
T Consensus 326 ~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg-~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~ 397 (443)
T PRK08360 326 LKRAEKLGNYTKKRLEEMKKKHELIGDVRG-IGLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFF------SG 397 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeeec-cceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeec------CC
Confidence 455555556666655543 22 12222 456666665311 1123445544 569998642 13
Q ss_pred CeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 408 GFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 408 ~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+|++ +..+++++++++++|.+++
T Consensus 398 ~~lr~~P~l~~t~~~id~~~~~l~~~l 424 (443)
T PRK08360 398 NVLRIQPPLTIEKEVLDEGLDILEEAI 424 (443)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 679996 6779999999999998876
No 209
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=5.9e-20 Score=176.45 Aligned_cols=213 Identities=15% Similarity=0.164 Sum_probs=146.8
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHH----HhCCcccccc
Q 045431 103 AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSV----IMGQTGEFQK 177 (433)
Q Consensus 103 ~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~ 177 (433)
..+...+|++.+|++. +. +..++++++++++.+ +..++++||+|+++.|+|.+....+. ..|
T Consensus 62 ~~p~~~~le~~lA~l~----g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~G------- 128 (398)
T PRK08249 62 TNPTVQAFEEKVRILE----GA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMG------- 128 (398)
T ss_pred CChHHHHHHHHHHHHh----CC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCC-------
Confidence 3456789999999987 53 345555666778886 57889999999999999988654443 334
Q ss_pred cccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 178 DAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
+++..++..+...+...+ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+......
T Consensus 129 -----i~v~~vd~~d~e~l~~~i--~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~--- 195 (398)
T PRK08249 129 -----VDVTLCETGDHEQIEAEI--AKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN--- 195 (398)
T ss_pred -----eEEEEcCCCCHHHHHHhc--CCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC---
Confidence 355555532111111112 257899999999999999998 7778888999999999999998543221
Q ss_pred cccccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChh
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFK 336 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 336 (433)
++ .. + . .+++.|+||.++.+|.++ ||++++++++ +.+...........++..+..+.+.++
T Consensus 196 ~l-~~-~-~--Divv~S~sK~l~g~~~~~gG~vv~~~~l~--------~~l~~~~~~~g~~~s~~~a~l~l~~l~----- 257 (398)
T PRK08249 196 PL-AL-G-A--DLVIHSATKFLSGHADALGGVVCGSKELM--------EQVYHYREINGATMDPMSAYLILRGMK----- 257 (398)
T ss_pred ch-hh-C-C--CEEeccCceecCCCCCceEEEEECCHHHH--------HHHHHHHHhcCCCCCHHHHHHHHhCcc-----
Confidence 12 11 1 2 277899999997567665 6777776664 555555554445566666655554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 045431 337 AVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+..+.++..+++..+.+.|+++
T Consensus 258 tL~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 258 TLKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcC
Confidence 34556677788888899999886
No 210
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1e-19 Score=173.55 Aligned_cols=221 Identities=14% Similarity=0.194 Sum_probs=151.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF 175 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~ 175 (433)
+.+|+ ......|++++|++. + .+++++++|+++++.+ +..++++||+|+++.|+|++....+... ...+
T Consensus 47 Y~R~~-npt~~~Le~~lA~le----g--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g-- 117 (388)
T PRK08861 47 YTRSG-NPNRGLLEQTLSELE----S--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD-- 117 (388)
T ss_pred ccCCC-CchHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC--
Confidence 45553 456889999999986 4 5899999999999997 5778999999999999998755444322 2112
Q ss_pred cccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
.++..++..+...+...+ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .
T Consensus 118 -------i~v~~vd~~d~e~l~~~i--~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~-~ 184 (388)
T PRK08861 118 -------FKVQFVDQSDAAALDAAL--AKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ-K 184 (388)
T ss_pred -------eEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC-C
Confidence 255555432111111111 258899999999999999999 678888899999999999999853322 1
Q ss_pred CCcccccCCCCcceEEEeccccccccc-ccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCC
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEG 334 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 334 (433)
|. .+ + -.+++.|++|.++-+ ++..|+++++++.+ .+++...........++.....+.. +
T Consensus 185 pl---~~-G---aDivv~S~tK~l~G~~d~~gG~i~~~~~~~-------~~~~~~~~~~~G~~~~p~~a~l~~r-----g 245 (388)
T PRK08861 185 PL---EL-G---ADFVIHSTTKYINGHSDVIGGVLITKTKEH-------AEELAWWGNCIGATGTPFDSYMTLR-----G 245 (388)
T ss_pred Cc---cc-C---CCEEEeecceeccCCCcceeEEEEecHHHH-------HHHHHHHHhccCCCCChHHHHHHHh-----c
Confidence 22 12 1 238899999998632 46789988755432 3445444444344455555443333 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 335 FKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+.+.-+.++..++...+.+.|+++
T Consensus 246 l~Tl~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 246 IRTLGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3445666777788888999999887
No 211
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=2.5e-20 Score=179.16 Aligned_cols=323 Identities=16% Similarity=0.179 Sum_probs=212.5
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCC----CCCCHHHHHHHHHHHhccCCCCC-CcEEEcCChHHHHHH-HHHh---c
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGA----EQGEKPLRAAIASTFYKDLGIEE-GDIFVSDGAKCDISR-LQIV---F 146 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~la~~l~~~~~~~~-~~i~~~~G~~~al~~-l~~l---~ 146 (433)
+.|+.+++++.+.+...........+.. ..-..+.|+.+++++ ++++ ++|++++|++.+++. +..+ +
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l----g~~~~~~v~~~~~~t~a~~~~~~~l~~~~ 85 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL----GAPPDEEVVFTSNGTEALNAVASSLLNPL 85 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH----TSSTTEEEEEESSHHHHHHHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc----CCccccccccccccchhhhhhhhcccccc
Confidence 6889999999998875532121111211 123346777788877 8888 899999999999997 5666 7
Q ss_pred CCCCEEEEeCCCChhhhhhHHHhC-CcccccccccccceEEEeecCccCCcccC-CCC--CCCccEEEEcCCCCccccCC
Q 045431 147 GSNVTMAVQDPSYPAYVDSSVIMG-QTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDIIFFCSPNNPTGAAA 222 (433)
Q Consensus 147 ~~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~ 222 (433)
++||+|++.+-.|++....+.... ..+ .++..++.+.++....+ ++. .++++++++++.+|.||+.+
T Consensus 86 ~~g~~vl~~~~~~~s~~~~~~~~~~~~g---------~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~ 156 (371)
T PF00266_consen 86 KPGDEVLVTSNEHPSNRYPWEEIAKRKG---------AEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRN 156 (371)
T ss_dssp TTTCEEEEEESSHHHHHHHHHHHHHHTT---------EEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBS
T ss_pred ccccccccccccccccccccccccccch---------hhhccccccccchhhhhhhhhhhccccceEEeecccccccEEe
Confidence 999999999999998774444332 112 47777877654433322 211 37899999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCC--
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDG-- 300 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~-- 300 (433)
+ +++|.++|+++|+++++|.+++.... +..+..+ +..++++|..|.+|.+| +|+++++++.+.+..
T Consensus 157 p---i~~I~~~~~~~~~~~~vD~~~~~g~~---~id~~~~----~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~ 224 (371)
T PF00266_consen 157 P---IEEIAKLAHEYGALLVVDAAQSAGCV---PIDLDEL----GADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPA 224 (371)
T ss_dssp S---HHHHHHHHHHTTSEEEEE-TTTTTTS---S--TTTT----TESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTS
T ss_pred e---eceehhhhhccCCceeEechhccccc---ccccccc----ccceeeecccccCCCCc--hhhheehhhhhhccccc
Confidence 9 88899999999999999999984222 3333322 23488999999554444 899999997752210
Q ss_pred ---cchhHH--HHHHH------hhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecC--
Q 045431 301 ---FPVAKD--FNRIV------CTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGG-- 366 (433)
Q Consensus 301 ---~~~~~~--~~~~~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-- 366 (433)
...... ..... .....+++.+...++..+++......+++.+++..+..+++.+.|+++ ++.+..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 304 (371)
T PF00266_consen 225 KPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDD 304 (371)
T ss_dssp SSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSC
T ss_pred cccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecc
Confidence 000000 01000 001113444444444445543322457888889999999999999998 5566442
Q ss_pred --CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCC------CCCCeEEEee--ccChhHHHHH
Q 045431 367 --KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGP------GGEGFIRVSA--FGHRGNVLEA 424 (433)
Q Consensus 367 --~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~------~~~~~iRi~~--~~~~~~l~~~ 424 (433)
..+..+.+.+++.+..++...|.++ ||.+..|..+.. ...+.||+|+ +++++|++++
T Consensus 305 ~~~~~~i~~~~~~~~~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 305 EPRRPSIVSFNLPGSDADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp GGBGTTEEEEEETTSSHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cccccceEEEeecCCCHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 3355677777877777777777666 999999876540 1137999995 6799999874
No 212
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.87 E-value=7.7e-20 Score=175.96 Aligned_cols=221 Identities=14% Similarity=0.173 Sum_probs=151.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhh----hhhHHHhCCc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAY----VDSSVIMGQT 172 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~ 172 (433)
+..|+. ....+|++.+|++. +. ++.+++++++.++.. +..++++||+|+++...|.+. ...+...|
T Consensus 64 Y~r~~~-p~~~~le~~lA~l~----g~--~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G-- 134 (403)
T PRK07810 64 YSRYGN-PTVSMFEERLRLIE----GA--EACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG-- 134 (403)
T ss_pred eeCCCC-chHHHHHHHHHHHh----CC--CcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC--
Confidence 455644 45789999999986 53 356666666677665 677899999999988666443 33444556
Q ss_pred ccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Q 045431 173 GEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252 (433)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~ 252 (433)
.+++.++.++...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+....
T Consensus 135 ----------~~v~~vd~~d~~~l~~ai--~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~ 199 (403)
T PRK07810 135 ----------VETVFVDGEDLSQWEEAL--SVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLL 199 (403)
T ss_pred ----------cEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCcccc
Confidence 367777653211111111 357899999999999999887 88889999999999999999985333
Q ss_pred CCCCCcccccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcC
Q 045431 253 DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS 331 (433)
Q Consensus 253 ~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 331 (433)
.. + + .. +..+++.|++|.++..|.++ |+++++++.+ .+.+...........++..+..+.+.|+
T Consensus 200 ~~-~--~-~~----gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~-------~~~l~~~~~~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 200 QR-G--L-PL----GADVVVYSGTKHIDGQGRVLGGAILGDREYI-------DGPVQKLMRHTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred CC-h--h-hc----CCcEEEccCCceecCCcCceeEEEEeChHHH-------HHHHHHHHHHhCCCCCHHHHHHHHhccC
Confidence 21 2 1 11 22488999999998678887 7888887764 2234433333334567777766665554
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHhhc-CCe
Q 045431 332 PEGFKAVHEVIGFYKENTDIIVETFNSL-GFK 362 (433)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 362 (433)
.+..+.++..++...+.+.|+++ ++.
T Consensus 265 -----tl~~R~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 265 -----TLALRVRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 34666677778888888889886 443
No 213
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.87 E-value=3.7e-20 Score=180.23 Aligned_cols=347 Identities=11% Similarity=0.062 Sum_probs=207.2
Q ss_pred HHHHhcCCCCceEEecCCCCCC---CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEE
Q 045431 54 AAHMLKYPDAEVISLGIGDTTE---PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIF 130 (433)
Q Consensus 54 ~~~~~~~~~~~~i~l~~g~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~ 130 (433)
+......++...+|+..|.+.. ..++.+.+++.+++.+. ...|.+..+..+|.+.+++.+ . ..+.++
T Consensus 41 G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~-----~~~~~~~~~~~~la~~L~~~~----~-~~~~v~ 110 (426)
T PRK00062 41 GAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG-----LSFGAPTELEVELAELVIELV----P-SIEMVR 110 (426)
T ss_pred CCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC-----CcCCCCCHHHHHHHHHHHHhC----C-CCCEEE
Confidence 3334445677899998886432 47899999999999752 123334556666777776653 2 357899
Q ss_pred EcCChHHHHHH-HHHh--cCCCCEEEEeCCCChhhhhhHHHh-CCccc-cc-ccccc-----cceEEEeecCccCCcccC
Q 045431 131 VSDGAKCDISR-LQIV--FGSNVTMAVQDPSYPAYVDSSVIM-GQTGE-FQ-KDAEK-----YGKIEYMRCTAENGFFPD 199 (433)
Q Consensus 131 ~~~G~~~al~~-l~~l--~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~-~~-~~~~~-----~~~~~~~~~~~~~~~~~~ 199 (433)
+++++++|+.. +... ...+++|+..+++|++........ +.... +. ..... ......++.++...+...
T Consensus 111 ~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 190 (426)
T PRK00062 111 MVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEEL 190 (426)
T ss_pred EecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHH
Confidence 99999999986 4322 234688999999999976433322 11000 00 00000 001122222111111111
Q ss_pred CCC-CCCccEEEEcCCCCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccc
Q 045431 200 LST-VARTDIIFFCSPNNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSK 277 (433)
Q Consensus 200 ~~~-~~~~~~i~l~~p~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK 277 (433)
++. ..++.+|++..-..-+|.+.+ .+.+++|.++|++||+++|+||+|..+.. +.......+...+| +.+|||
T Consensus 191 i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~~~~~~~~~~pD----i~~~gK 265 (426)
T PRK00062 191 FEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALGGAQGYYGVTPD----LTTLGK 265 (426)
T ss_pred HHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCccHHHHhCCCcc----hHhhhh
Confidence 111 135556555422344787775 88899999999999999999999997733 32211111221233 358999
Q ss_pred cccccccceeeeeccccccccCCcchhHHHH---HHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHH
Q 045431 278 YAGFTGVRLGWTVIPKELLFSDGFPVAKDFN---RIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIV 353 (433)
Q Consensus 278 ~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 353 (433)
.++ +|+++|+++++++++ +.+. .....++.+.+++.++++.+.|+.... +..++.++.....++.+.
T Consensus 266 ~l~-~G~p~ga~~~~~~i~--------~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 266 IIG-GGLPVGAFGGRREIM--------EQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLK 336 (426)
T ss_pred Hhh-CCCcceeeeEHHHHH--------HhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 998 899999999988775 3332 122334456788999888888763222 233444444444444444
Q ss_pred HHHhhcCCee-ecCCCccEEEEECCCC-----------C---hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccCh
Q 045431 354 ETFNSLGFKV-YGGKNAPYVWVQFPGR-----------S---SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHR 418 (433)
Q Consensus 354 ~~l~~~g~~~-~~~~~g~~~~~~~~~~-----------~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~ 418 (433)
+.++++++.. ..+ .|.++-+.+... + ...+...++ ++||.+.|.. .+.+++++..++
T Consensus 337 ~~~~~~~~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~------~~~~~~~~~~t~ 408 (426)
T PRK00062 337 EAAKKAGIPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ------FEAGFVSAAHTD 408 (426)
T ss_pred HHHHHcCCceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC------cCceeeeccCCH
Confidence 4444555543 223 444444444210 1 134555555 4599997742 134778887899
Q ss_pred hHHHHHHHHHHHhh
Q 045431 419 GNVLEACKRFKHLY 432 (433)
Q Consensus 419 ~~l~~~l~~l~~~l 432 (433)
+++++++++|++++
T Consensus 409 ~ei~~~~~~l~~~l 422 (426)
T PRK00062 409 EDIEKTLEAARKAF 422 (426)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998876
No 214
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=2e-19 Score=171.27 Aligned_cols=246 Identities=16% Similarity=0.168 Sum_probs=159.2
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC--CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-H
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA--EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-L 142 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l 142 (433)
|..+.. ++++.++.+.++..... .....|+. ..+...|+++||++. + .+++++++|+++|+.+ +
T Consensus 27 i~~sst-~~~~~~~~~~~~~~~~~------~~~~~Y~r~~npt~~~Le~~iA~le----~--~~~~~~~~sG~~Ai~~~l 93 (394)
T PRK09028 27 VFRAST-VVFDTVAEMRHAAKNRA------NGEMFYGRRGTPTHFAFQAAIVELE----G--GAGTALYPSGAAAISNAL 93 (394)
T ss_pred eeCCCC-cccCCHHHHHHHhccCc------cCCceecCCCCchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHH
Confidence 444433 23455666555443321 11234654 334579999999885 3 2478999999999996 6
Q ss_pred HHhcCCCCEEEEeCCCChhhhhhHHH-hCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccC
Q 045431 143 QIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 143 ~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~ 221 (433)
.+++++||+|++.+|.|++....+.. +...+ .++..++..+...+...+ .+++++|++++|+||||.+
T Consensus 94 ~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~G---------i~v~~v~~~~~e~l~~~l--~~~TklV~lespsNPtg~v 162 (394)
T PRK09028 94 LSFLKAGDHLLMVDSCYEPTRDLCDKILKGFG---------IETTYYDPMIGEGIRELI--RPNTKVLFLESPGSITMEV 162 (394)
T ss_pred HHHhCCCCEEEEECCCcHHHHHHHHHhhhhcc---------eEEEEECCCCHHHHHHhc--CcCceEEEEECCCCCCCcH
Confidence 78899999999999999887654421 11111 255555433221221112 3689999999999999875
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc-ccccceeeeeccccccccCC
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG-FTGVRLGWTVIPKELLFSDG 300 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~-~~G~r~G~l~~~~~~~~~~~ 300 (433)
.++++|+++|+++|+++|+|++|+.... ..++ .+ +-.+++.|.+|+++ -++.-.|+++.++++.
T Consensus 163 ---~dl~~I~~la~~~g~~lvvD~t~a~p~~---~~Pl-~~----GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~---- 227 (394)
T PRK09028 163 ---QDVPTLSRIAHEHDIVVMLDNTWASPIN---SRPF-EM----GVDISIQAATKYIVGHSDVMLGTATANEKHW---- 227 (394)
T ss_pred ---HHHHHHHHHHHHcCCEEEEECCcccccc---CCcc-cc----CceEEEEeCCeEecCCCCEEEEEEECCHHHH----
Confidence 5589999999999999999999984211 1112 12 23499999999995 3345678777665542
Q ss_pred cchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 301 FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+...........++.....+. .+.+.+.-+.++..++...+.+.|+++
T Consensus 228 ----~~l~~~~~~~G~~~~p~~a~l~~-----rgl~TL~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 228 ----DQLREHSYLMGQCTSPDDVYLAM-----RGLRTLGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred ----HHHHHHHHhcCCCCCHHHHHHHH-----cccCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 44443333333334454433222 344556777888889999999999987
No 215
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=1.3e-19 Score=173.80 Aligned_cols=216 Identities=16% Similarity=0.208 Sum_probs=148.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhh----hHHHhCCcc
Q 045431 99 SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVD----SSVIMGQTG 173 (433)
Q Consensus 99 ~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~ 173 (433)
..|+ ..-..+|++.++++. +. +++++++++++++.+ +..++++||+|+++.+.|.+... .+...|
T Consensus 49 ~r~~-~p~~~~le~~la~l~----g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g--- 118 (380)
T TIGR01325 49 SRYA-NPTVAAFEERIAALE----GA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG--- 118 (380)
T ss_pred ecCC-CchHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC---
Confidence 4553 445789999999986 54 467888889999886 67788999999999998876433 334455
Q ss_pred cccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
.++..++.++...+...+ .+++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 119 ---------~~v~~v~~~d~~~l~~~i--~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~ 184 (380)
T TIGR01325 119 ---------IEVSFVDPTDLNAWEAAV--KPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ 184 (380)
T ss_pred ---------CEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 366677654221221111 257899999999999999987 788889999999999999999854322
Q ss_pred CCCCcccccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCc
Q 045431 254 DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP 332 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 332 (433)
. + + .. +..+++.|+||.++.+|.++ |+++++++++ +.+...........++..... ++.
T Consensus 185 ~-p--l-~~----g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~--------~~l~~~~~~~g~~~~p~~a~~---~l~- 244 (380)
T TIGR01325 185 Q-P--L-KL----GADVVVYSATKHIDGQGRVMGGVIAGSEELM--------AEVAVYLRHTGPAMSPFNAWV---LLK- 244 (380)
T ss_pred C-c--h-hh----CCCEEEeeccceecCCCCeEEEEEEeCHHHH--------HHHHHHHHhhCCCCCHHHHHH---HHh-
Confidence 1 2 2 12 12388889999998677776 7788777764 445544433333334444332 332
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 333 EGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+.+..+.++..+++..+.+.|+++
T Consensus 245 -~l~tl~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 245 -GLETLSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred -ccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 22344566777888888899999887
No 216
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=2.3e-19 Score=174.37 Aligned_cols=329 Identities=14% Similarity=0.147 Sum_probs=199.4
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCC---CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYG---AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~---~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
+..+.|+.+... +.|+.+.+++.+.+...........+. ......+.++++ ++ +++++++|++|+|+++++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l----~g~~~~~v~~~~~~t~~l 99 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RL----VGAKEDEVVVMNTLTINL 99 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cc----cCCCCCcEEEeCCchHHH
Confidence 457889877755 568889999988776543211111111 111122222333 33 488999999999999999
Q ss_pred HH-HHHhcCCC---CEEEEeCCCChhhhhhHH----HhCCcccccccccccceE----EEeecCccCCccc-CCCC----
Q 045431 140 SR-LQIVFGSN---VTMAVQDPSYPAYVDSSV----IMGQTGEFQKDAEKYGKI----EYMRCTAENGFFP-DLST---- 202 (433)
Q Consensus 140 ~~-l~~l~~~g---d~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~---- 202 (433)
++ +.++++++ +.|++.+.+|++....+. ..|. ++ +.++.+.++.... +++.
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 167 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGL------------TVEESMVQIEPREEETLRLEDILDTIEK 167 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCC------------CcccceEEeccCCCCccCHHHHHHHHHh
Confidence 97 56667664 368888899988554433 3342 33 3444433222221 1211
Q ss_pred -CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc-
Q 045431 203 -VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG- 280 (433)
Q Consensus 203 -~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~- 280 (433)
.+++++|++++++|.||..++ +++|.++|+++|+++++|++++.... +..+... +..+++.|.+|+++
T Consensus 168 ~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~~---~id~~~~----gvD~~~~s~hK~l~g 237 (406)
T TIGR01814 168 NGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGNV---PLDLHDW----GVDFACWCTYKYLNA 237 (406)
T ss_pred cCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCCc---ccccccC----CCCEEEEcCccccCC
Confidence 267899999999999999998 88899999999999999999984211 3333222 33489999999873
Q ss_pred ccccceeeeeccccccccCCcchhHH--------HH------HH-HhhccCCCcHHHHHH---HHHhcCcCChhHHHHHH
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKD--------FN------RI-VCTCFNGASNISQAG---GLACLSPEGFKAVHEVI 342 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~--------~~------~~-~~~~~~~~~~~~q~~---~~~~l~~~~~~~~~~~~ 342 (433)
.|| |.+++.++.+....+..... +. .. ......+++.+...+ ++.++...+ +++.+
T Consensus 238 ~pG---~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g---~~~i~ 311 (406)
T TIGR01814 238 GPG---AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAG---MEALR 311 (406)
T ss_pred CCC---eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcC---HHHHH
Confidence 234 43443322221100100000 00 00 000011233333333 334443333 47777
Q ss_pred HHHHHHHHHHHHHHhhc-----CCeeecCC----CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe
Q 045431 343 GFYKENTDIIVETFNSL-----GFKVYGGK----NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS 413 (433)
Q Consensus 343 ~~~~~~~~~l~~~l~~~-----g~~~~~~~----~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~ 413 (433)
++.+...+++.+.|++. |+.+..+. .+..+.+.++ ....++...|.+ +||.+.. ...+.||+|
T Consensus 312 ~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~~~~~~~~L~~-~gi~v~~------~~~~~iRiS 383 (406)
T TIGR01814 312 KKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VPGKAVFQALIK-RGVIGDK------REPSVIRVA 383 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CCHHHHHHHHHH-CCEEEec------cCCCeEEEe
Confidence 88888888888888764 36666542 2345666776 456667777654 5998753 124689999
Q ss_pred e---ccChhHHHHHHHHHHHhhC
Q 045431 414 A---FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 414 ~---~~~~~~l~~~l~~l~~~l~ 433 (433)
+ +++++|++.++++|++++.
T Consensus 384 ~~~~~nt~~did~l~~~l~~~~~ 406 (406)
T TIGR01814 384 PVPLYNTFVDVYDAVNVLEEILD 406 (406)
T ss_pred chhccCCHHHHHHHHHHHHHHhC
Confidence 5 5689999999999998763
No 217
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=3e-19 Score=171.48 Aligned_cols=219 Identities=16% Similarity=0.159 Sum_probs=144.5
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH-hCCccccccccc
Q 045431 103 AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEFQKDAE 180 (433)
Q Consensus 103 ~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~ 180 (433)
+.....+|++++|++. +.+ ..+++++ +++++.+ +..++++||+|+++.|+|++....+.. +...+
T Consensus 59 ~~p~~~~Le~~lA~~~----g~~-~~i~~~s-G~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~g------- 125 (388)
T PRK07811 59 GNPTRTALEEQLAALE----GGA-YGRAFSS-GMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWG------- 125 (388)
T ss_pred CCccHHHHHHHHHHHh----CCC-ceEEeCC-HHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCC-------
Confidence 4567899999999997 544 3455555 5788886 678899999999999999865544332 22222
Q ss_pred ccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc
Q 045431 181 KYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 260 (433)
.++..++..+...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .++.
T Consensus 126 --i~~~~~d~~d~e~l~~~i--~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~---~p~~ 195 (388)
T PRK07811 126 --VEYTPVDLSDLDAVRAAI--TPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ---QPLA 195 (388)
T ss_pred --eEEEEeCCCCHHHHHHhc--CcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC---Cchh
Confidence 255555542211111111 257899999999999998765 888999999999999999999854321 1221
Q ss_pred ccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHH
Q 045431 261 EIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVH 339 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 339 (433)
. +..+++.|++|.++.+| .+.||++++++.+ .+.+...........++.....+...++ .+.
T Consensus 196 -~----gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l-------~~~~~~~~~~~g~~~s~~~a~l~~~~L~-----tl~ 258 (388)
T PRK07811 196 -L----GADVVVHSTTKYIGGHSDVVGGALVTNDEEL-------DEAFAFLQNGAGAVPGPFDAYLTLRGLK-----TLA 258 (388)
T ss_pred -h----CCcEEEecCceeecCCCCcEEEEEEECCHHH-------HHHHHHHHHhcCCCCCHHHHHHHHhccC-----cHH
Confidence 1 12388999999997544 4679998865443 2444433333333344444433333333 345
Q ss_pred HHHHHHHHHHHHHHHHHhhc-CC
Q 045431 340 EVIGFYKENTDIIVETFNSL-GF 361 (433)
Q Consensus 340 ~~~~~~~~~~~~l~~~l~~~-g~ 361 (433)
.+.++..++...+.+.|+++ ++
T Consensus 259 ~R~~~~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 259 VRMDRHSENAEAVAEFLAGHPEV 281 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCe
Confidence 66667788888999999887 44
No 218
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=2e-19 Score=173.41 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=144.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhH----HHhCCcc
Q 045431 99 SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSS----VIMGQTG 173 (433)
Q Consensus 99 ~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~ 173 (433)
..| +.....+|++.++++. +.+ + .++++++++++.+ +..++++||+|+++.|+|....... ...|
T Consensus 60 ~r~-~~p~~~~le~~lA~l~----g~~-~-~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G--- 129 (403)
T PRK07503 60 SRI-SNPTLALLEQRMASLE----GGE-A-AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG--- 129 (403)
T ss_pred eCC-CCchHHHHHHHHHHHh----CCC-c-EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC---
Confidence 344 3446789999999986 553 3 4555566678876 5678899999999999997644333 3344
Q ss_pred cccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
.++..++.++...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 130 ---------~~v~~vd~~d~~~l~~~i--~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~ 195 (403)
T PRK07503 130 ---------VTVRHVDLTDPAALKAAI--SDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ 195 (403)
T ss_pred ---------EEEEEeCCCCHHHHHHhc--CccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 366666654211111111 357899999999999999887 788899999999999999999853221
Q ss_pred CCCCcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHH--HhhccCCCcHHHHHHHHHhc
Q 045431 254 DNPRSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRI--VCTCFNGASNISQAGGLACL 330 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l 330 (433)
.++ .. +..+++.|+||.++.+| .+.|+++.+++++ +++... ........+++.+..+.+.+
T Consensus 196 ---~~l-~~----g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~--------~~l~~~~~~~~~g~~~s~~~a~l~l~~L 259 (403)
T PRK07503 196 ---RPL-EL----GADLVVHSATKYLGGHGDITAGLVVGGKALA--------DRIRLEGLKDMTGAVMSPFDAFLLMRGL 259 (403)
T ss_pred ---Cch-hh----CCCEEEccccccccCCCceeEEEEEcCHHHH--------HHHHhhhHHhCcCCCCCHHHHHHHHcCc
Confidence 122 12 12388999999998655 7789998777664 444321 22223345555554444333
Q ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 331 SPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+..+.++..++...+.+.|+++
T Consensus 260 -----~tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 260 -----KTLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHhC
Confidence 334555566667888888888876
No 219
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2.3e-19 Score=172.33 Aligned_cols=218 Identities=16% Similarity=0.155 Sum_probs=148.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh----HHHhCC
Q 045431 97 GYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQ 171 (433)
Q Consensus 97 ~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~ 171 (433)
.+..|+ .+...+|++.++++. + .+++++++|+++++.+ +..++++||+|++++|+|..+... ....|
T Consensus 58 ~Y~r~~-~pt~~~Le~~lA~l~----g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G- 129 (394)
T PRK07050 58 RYGLHA-TPTSLALAQRLAEIE----G--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG- 129 (394)
T ss_pred ccCCCC-CHHHHHHHHHHHHHh----C--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC-
Confidence 345563 445678888888875 4 4689999999999997 677899999999999999987653 33445
Q ss_pred cccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccc
Q 045431 172 TGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYI 251 (433)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~ 251 (433)
+++..++..+...+...+ .+++++|++++|+||+|. ..++++|+++|+++|+++|+|++|+...
T Consensus 130 -----------i~v~~vd~~~~~~l~~~i--~~~tklV~le~p~Np~~~---~~di~~I~~ia~~~gi~livD~a~a~~~ 193 (394)
T PRK07050 130 -----------ITVRFYDPLIGAGIADLI--QPNTRLIWLEAPGSVTME---VPDVPAITAAARARGVVTAIDNTYSAGL 193 (394)
T ss_pred -----------eEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCcc---HhhHHHHHHHHHHcCCEEEEECCccccc
Confidence 366666543211111111 368999999999999975 6669999999999999999999998522
Q ss_pred cCCCCCcccccCCCCcceEEEecccccccccc--cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHh
Q 045431 252 SDDNPRSIFEIPGAKEVAIETSSFSKYAGFTG--VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLAC 329 (433)
Q Consensus 252 ~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G--~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 329 (433)
.. .++ .. +..+++.|++|.++ ++ .+.|++++.++.+ .+++...+.....+.++.....+...
T Consensus 194 ~~---~~l-~~----GaDi~v~S~tK~~~-g~~~~~gG~v~~~~~~~-------~~~~~~~~~~~G~~~~~~~a~l~lr~ 257 (394)
T PRK07050 194 AF---KPF-EH----GVDISVQALTKYQS-GGSDVLMGATITADAEL-------HAKLKLARMRLGIGVSADDCSLVLRG 257 (394)
T ss_pred cc---CHH-Hc----CCeEEEEECCceec-CCCCeeEEEEEECCHHH-------HHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 11 111 11 22488999999996 44 4578877754332 35565555444444555554433333
Q ss_pred cCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
++ .+..+.++..++...+.+.|+++
T Consensus 258 l~-----tl~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 258 LP-----SLQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred CC-----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 34455666677777888888876
No 220
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.4e-18 Score=169.87 Aligned_cols=352 Identities=10% Similarity=0.051 Sum_probs=206.2
Q ss_pred HHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
.+......+++..||+..|.. .+ ..+|.+.+++.+++.+... .....+ ......+|.+.|+++. +-..+.+
T Consensus 33 ~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~-~~~~~~-~~~~~~~la~~L~~~~----~~~~~~v 106 (433)
T PRK08117 33 EGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMH-GPSGVI-YYESILKLAEELAEIT----PGGLDCF 106 (433)
T ss_pred eeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccC-cccccc-CCHHHHHHHHHHHHhC----CCCCCEE
Confidence 333344556778999987743 22 3678999999999876421 111112 2223344444444442 3334689
Q ss_pred EEcCChHHHHHH-HH--HhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCccCC---------
Q 045431 130 FVSDGAKCDISR-LQ--IVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAENG--------- 195 (433)
Q Consensus 130 ~~~~G~~~al~~-l~--~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~--------- 195 (433)
++++++++|... +. .......+|+..+-+|++.......+ +....+ ..+......+..+|......
T Consensus 107 ~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (433)
T PRK08117 107 FFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEV 186 (433)
T ss_pred EEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhH
Confidence 998888888875 42 12333467888888887754333222 211110 00111111233333321000
Q ss_pred ----cccCCCC-------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc
Q 045431 196 ----FFPDLST-------VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 196 ----~~~~~~~-------~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
...+++. ..++.+ ++..| +.-.|.+ .+.+.+++|.++|++||+++|+||+|.++...+.......+
T Consensus 187 ~~~~~~~~l~~~~~~~~~~~~~aa-vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~ 265 (433)
T PRK08117 187 CFLECLRDLESLFKHQVTPEEVAA-VIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTF 265 (433)
T ss_pred HHHHHHHHHHHHHHhccCCCcEEE-EEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhc
Confidence 0001111 123444 44566 5556665 47889999999999999999999999987665543222222
Q ss_pred CCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHH
Q 045431 263 PGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVI 342 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 342 (433)
+..+| +.||||.+| +|+++|+++++++++ +.+.......+.+.++++++++.+.|+.... +.+.
T Consensus 266 gv~pD----i~t~sK~lg-~G~pigav~~~~~i~--------~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~---~~l~ 329 (433)
T PRK08117 266 GVVPD----IMTIAKGIA-SGLPLSAVVASKELM--------EQWPLGSHGTTFGGNPVACAAALATLEVIKE---EKLL 329 (433)
T ss_pred CCCCC----Eeehhhhcc-CCCcceeEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHH
Confidence 21222 469999998 999999999998875 3333333444456789999988888873211 2344
Q ss_pred HHHHHHHHHHHHHHhhc----CCeeecCCCccEEEEECCCC------C-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEE
Q 045431 343 GFYKENTDIIVETFNSL----GFKVYGGKNAPYVWVQFPGR------S-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIR 411 (433)
Q Consensus 343 ~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~~~~~~~------~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iR 411 (433)
++++++.+++.+.|+++ ++.......|.++++.+... . ...+...+ .++||.+.+.. ...+++|
T Consensus 330 ~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g----~~~~~lR 404 (433)
T PRK08117 330 DNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKC-LEKGLLFYLCG----NAGNVLR 404 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHH-HHCCCEEeecC----CCCCEEE
Confidence 55555566666666553 22221223567777777421 1 22344444 45699887632 1246899
Q ss_pred Ee--eccChhHHHHHHHHHHHhh
Q 045431 412 VS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 412 i~--~~~~~~~l~~~l~~l~~~l 432 (433)
++ +..+++++++++++|.+++
T Consensus 405 l~p~~~~t~~~i~~~~~~l~~~l 427 (433)
T PRK08117 405 MIPPLTVTKEEIDEGLDILDEAL 427 (433)
T ss_pred EeCCccCCHHHHHHHHHHHHHHH
Confidence 99 5679999999999998875
No 221
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.85 E-value=9.1e-19 Score=167.26 Aligned_cols=301 Identities=12% Similarity=0.147 Sum_probs=181.1
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh-cCCCCEEEEe
Q 045431 78 PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV-FGSNVTMAVQ 155 (433)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l-~~~gd~Vl~~ 155 (433)
.+...+++.+.+.. ... .|..++++++.+++.+..+ .+++++|+|+++++.+ +..+ ++|||+|+++
T Consensus 10 ~~~e~~a~~~~~~~----~~~------~~~g~~~~~~e~~la~~~g--~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~ 77 (376)
T TIGR02379 10 TGQELEYIAEAISE----GKL------SGDGPFSRRCETWLENRTG--TKKALLTPSCTAALEMAALLLDIQPGDEVIMP 77 (376)
T ss_pred CHHHHHHHHHHHHc----CCc------cCCcHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence 45557778777653 111 1234566666666654334 4689999999999987 4565 7999999999
Q ss_pred CCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCC---CC--CCCccEEEEcCCCCccccCCCHHHHHHH
Q 045431 156 DPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---ST--VARTDIIFFCSPNNPTGAAATREQLTRL 230 (433)
Q Consensus 156 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i 230 (433)
+|+|..+...+...| .+++.++++++ ++..++ ++ .+++++|+ |+||+|...+ +++|
T Consensus 78 ~~t~~~~~~~~~~~G------------~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I 138 (376)
T TIGR02379 78 SYTFVSTANAFVLRG------------AKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTI 138 (376)
T ss_pred CCCcHHHHHHHHHcC------------CEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHH
Confidence 999999988888888 58888888764 333343 21 35788876 6778999887 7789
Q ss_pred HHHHHHcCCEEEEeccccccc-cCCCCCcccccCCCCcceEEEeccc----ccccccccceeeeeccccccccCCcchhH
Q 045431 231 VQFAKDNGSIIVYDSAYALYI-SDDNPRSIFEIPGAKEVAIETSSFS----KYAGFTGVRLGWTVIPKELLFSDGFPVAK 305 (433)
Q Consensus 231 ~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~vi~i~S~s----K~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 305 (433)
.++|++||++||+|++|+... +.+.+ +..+ ..+++|| |.+. +|.+.|+++++++.+ .+
T Consensus 139 ~~la~~~~i~vIeDaa~~~g~~~~~~~--~g~~-------~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~-------~~ 201 (376)
T TIGR02379 139 MALANKHQLFVIEDAAQGVMSTYKGRA--LGSI-------GHLGTFSFHETKNYT-SGGEGGALLINDQAF-------IE 201 (376)
T ss_pred HHHHHHCCCEEEEECccccCCccCCcc--cCCC-------CCEEEEeCCCCCcCc-ccCCceEEEECCHHH-------HH
Confidence 999999999999999998653 43321 2111 2234444 8885 788899988875443 24
Q ss_pred HHHHHHhhcc---------------------CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc---C-
Q 045431 306 DFNRIVCTCF---------------------NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL---G- 360 (433)
Q Consensus 306 ~~~~~~~~~~---------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g- 360 (433)
+++.+..... ...+.+..+.+..-| +.+++..++-++..++..+.|.++ +
T Consensus 202 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~ 276 (376)
T TIGR02379 202 RAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGI 276 (376)
T ss_pred HHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCe
Confidence 4444332110 111122211111112 223444444444444555666543 1
Q ss_pred Ceeec-CCCc----cEEEEECCC-CChHHHHHHHHHcCCeEecCCC----CCC------C-CC---------CCeEEEee
Q 045431 361 FKVYG-GKNA----PYVWVQFPG-RSSWDVFSEILEKTHVVTTPGS----GFG------P-GG---------EGFIRVSA 414 (433)
Q Consensus 361 ~~~~~-~~~g----~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~----~f~------~-~~---------~~~iRi~~ 414 (433)
..... +.+. .++++.++. .+..++...| +++||.+++.. ... . .. ...+.|-+
T Consensus 277 ~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~ 355 (376)
T TIGR02379 277 IELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL 355 (376)
T ss_pred eeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC
Confidence 22211 1121 234566653 2345555555 55699887432 110 0 00 22355554
Q ss_pred c--cChhHHHHHHHHHHHhh
Q 045431 415 F--GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 415 ~--~~~~~l~~~l~~l~~~l 432 (433)
. .++++++..++.|++++
T Consensus 356 ~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 356 YYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 3 37999999999998875
No 222
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.85 E-value=7.8e-19 Score=168.61 Aligned_cols=220 Identities=19% Similarity=0.206 Sum_probs=144.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF 175 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~ 175 (433)
+..|+ .+...+|++.+|++. +.+ ..++++++++++.+ +..++++||+|+++.|.|......+... ...|
T Consensus 53 y~r~~-~p~~~~le~~lA~l~----g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G-- 123 (391)
T TIGR01328 53 YSRLG-NPTVSNLEGRIAFLE----GTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG-- 123 (391)
T ss_pred eeCCC-CchHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC--
Confidence 34553 345678999999997 543 35666666778876 6778899999999999887654443321 1111
Q ss_pred cccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
..+..++.++...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 124 -------~~~~~vd~~d~e~l~~~i--~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~-- 189 (391)
T TIGR01328 124 -------IQVDFINMAIPEEVKAHI--KDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT-- 189 (391)
T ss_pred -------eEEEEECCCCHHHHHHhh--ccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC--
Confidence 366666654211111111 357899999999999999988 778888899999999999999853221
Q ss_pred CCcccccCCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhh--ccCCCcHHHHHHHHHhcCc
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCT--CFNGASNISQAGGLACLSP 332 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~ 332 (433)
.++ .. +..+++.|+||.+|.+|.++ |+++++++++ +.+...... .....++.....+...++
T Consensus 190 -~~~-~~----g~Divv~S~sK~lgg~g~~~gG~v~~~~~li--------~~l~~~~~~~~~g~~l~~~~a~l~l~~L~- 254 (391)
T TIGR01328 190 -NPV-AL----GVDVVVHSATKYIGGHGDVVAGLICGKAELL--------QQIRMVGIKDMTGSVISPFDAWLILRGLK- 254 (391)
T ss_pred -Cch-hc----CCCEEEccccccccCCCCceEEEEEcCHHHH--------HHHHHHHHHhCCCCCCCcHHHHHHHhCcC-
Confidence 112 11 12388899999998788774 7777777664 444432211 122234444443333332
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 333 EGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+..+.++.+++...+.+.|+++
T Consensus 255 ----tl~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 255 ----TLNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 34556677788888899999886
No 223
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.3e-18 Score=159.70 Aligned_cols=323 Identities=13% Similarity=0.160 Sum_probs=219.1
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC-CcEEEcCChHHHHHH-HHHhcCCCCEE
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE-GDIFVSDGAKCDISR-LQIVFGSNVTM 152 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~-~~i~~~~G~~~al~~-l~~l~~~gd~V 152 (433)
.+.++.+++++.+.. .... +.-..++-+.+.+.+..-++.+. +-++++++++.++.+ +.++++|||+|
T Consensus 14 ~~v~~~V~~am~~~~--------~~h~--s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkV 83 (383)
T COG0075 14 VPVPPRVLLAMARPM--------VGHR--SPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKV 83 (383)
T ss_pred CCCCHHHHHHhcCCC--------CCCC--CHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeE
Confidence 457788887777633 2222 22233444444444443445553 556677888889987 79999999999
Q ss_pred EEeCCCChhh--hhhHHHhCCcccccccccccceEEEeecCccCCcccC-----CCCCCCccEEEEcCCCCccccCCCHH
Q 045431 153 AVQDPSYPAY--VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-----LSTVARTDIIFFCSPNNPTGAAATRE 225 (433)
Q Consensus 153 l~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~l~~p~nPtG~~~~~~ 225 (433)
++...+.++. .++++.+|. +++.+.......+.++ +++.+++++|.++|...+||+..+
T Consensus 84 Lv~~nG~FG~R~~~ia~~~g~------------~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp-- 149 (383)
T COG0075 84 LVVVNGKFGERFAEIAERYGA------------EVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP-- 149 (383)
T ss_pred EEEeCChHHHHHHHHHHHhCC------------ceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc--
Confidence 9999988774 577777773 6666666543333332 334578899999999999999887
Q ss_pred HHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC------
Q 045431 226 QLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD------ 299 (433)
Q Consensus 226 ~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~------ 299 (433)
+++|+++|++||.++|+|.+-+. ++.+..+.++ +..+++++..|.++.| -.+|++.++++.+..-
T Consensus 150 -l~~I~~~~k~~g~l~iVDaVsS~---Gg~~~~vd~w----giDv~itgSQK~l~~P-PGla~v~~S~~a~e~~~~~~~~ 220 (383)
T COG0075 150 -LKEIAKAAKEHGALLIVDAVSSL---GGEPLKVDEW----GIDVAITGSQKALGAP-PGLAFVAVSERALEAIEERKHP 220 (383)
T ss_pred -HHHHHHHHHHcCCEEEEEecccC---CCcccchhhc----CccEEEecCchhccCC-CccceeEECHHHHHHHhcCCCC
Confidence 89999999999999999998772 2224434333 2348888889988733 2379999887775321
Q ss_pred -CcchhHHHHHHH---hhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCC---CccEE
Q 045431 300 -GFPVAKDFNRIV---CTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK---NAPYV 372 (433)
Q Consensus 300 -~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~~~ 372 (433)
..-....+.+.. .....+++.....+..++|+....+.++.+.++++++.+.+++.++++|++..... .....
T Consensus 221 ~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvt 300 (383)
T COG0075 221 SFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVT 300 (383)
T ss_pred ceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceE
Confidence 111112222222 23334455555555566666544466899999999999999999999999886621 22345
Q ss_pred EEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec--cChhHHHHHHHHHHHhh
Q 045431 373 WVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF--GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~l 432 (433)
.+..| +.+..+....+++++|+.+.+|.. +.....|||+.+ .+..++..++.+|..+|
T Consensus 301 a~~~P~g~~~~~~~~~~~~~~g~~i~gg~~--~l~gkifRIGhMG~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 301 AIKVPEGVDDKKVRRALLKEYGVEIAGGQG--PLKGKIFRIGHMGNVRPEDVLAALAALEAAL 361 (383)
T ss_pred EEECCCCCCcHHHHHHHHHhCCEEeccccc--ccCccEEEEecCccCCHHHHHHHHHHHHHHH
Confidence 56666 455556666788888999988764 445678999953 37899999999998775
No 224
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=5.8e-19 Score=167.58 Aligned_cols=290 Identities=16% Similarity=0.144 Sum_probs=176.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK 177 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 177 (433)
+..| +.+...+|++++|++. ..+++++++|+++|+.++..++++||+|+++.+.|.+....+......+.
T Consensus 48 Y~R~-~~p~~~~le~~lA~le------g~~~~v~~~sG~aAi~~~l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~--- 117 (364)
T PRK07269 48 YTRT-KNPTRAKLEETLAAIE------SADYALATSSGMSAIVLAFSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGR--- 117 (364)
T ss_pred eeCC-CCccHHHHHHHHHHHh------CCCeEEEeCCHHHHHHHHHHHhCCCCEEEEecCCcCchHHHHHHHHhcCc---
Confidence 4455 3457899999999996 35799999999999998556789999999999999776554433321100
Q ss_pred cccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 178 DAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
..+... .+.+ .+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.-... .
T Consensus 118 -----~~~~~~-~d~~-~l~~~i--~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~---~ 182 (364)
T PRK07269 118 -----FHFTYA-NTEE-ELIAAI--EEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ---R 182 (364)
T ss_pred -----EEEEec-CCHH-HHHHhc--CcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC---C
Confidence 111111 1111 111111 368899999999999999876 888999999999999999997632211 2
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChh
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFK 336 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 336 (433)
++ .. .-.+++.|++|.++-.| .=.|+++++++.+ .+++...........+++....+..-|+
T Consensus 183 pl-~~----gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l-------~~~~~~~~~~~G~~~s~~~a~l~~~~L~----- 245 (364)
T PRK07269 183 PI-EL----GADIVLHSATKYLSGHNDVLAGVVVTNDLEL-------YEKLFYNLNTTGAVLSPFDSYLLMRGLK----- 245 (364)
T ss_pred ch-hh----CCcEEEecCceeccCCCcccceEEEeCcHHH-------HHHHHHHHHHhCCCCCHHHHHHHHcCCC-----
Confidence 22 11 12388999999996322 1247878754432 2444433332223345555544444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CC-eee-cCCCccEEEEECCCCC-hHHHHHH---------HHHcCCeEecCCCCCC
Q 045431 337 AVHEVIGFYKENTDIIVETFNSL-GF-KVY-GGKNAPYVWVQFPGRS-SWDVFSE---------ILEKTHVVTTPGSGFG 403 (433)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~-~~~~g~~~~~~~~~~~-~~~~~~~---------l~~~~gi~v~~g~~f~ 403 (433)
.+..+.++.+++...+.+.|+++ ++ .+. ++.+|+ +.+.+.+.. ...++.. +....++.+.|+..+.
T Consensus 246 tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~-~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~ 324 (364)
T PRK07269 246 TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGM-ISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTH 324 (364)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcE-EEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCccccc
Confidence 35777778889999999999987 44 444 444454 444443211 1122221 1112345555654332
Q ss_pred C-----------CCCCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 404 P-----------GGEGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 404 ~-----------~~~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
. ..++.||||+..+ +.+.++.-|.++|
T Consensus 325 ~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al 362 (364)
T PRK07269 325 ADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQAL 362 (364)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 1 1257899997653 3444555555544
No 225
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.84 E-value=6.1e-19 Score=170.71 Aligned_cols=354 Identities=12% Similarity=0.063 Sum_probs=202.0
Q ss_pred HHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC---
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--- 125 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~--- 125 (433)
..+......+++..||+..|.-. -..+|.+.+++.+++.+... .+.. ....+.+..+++.|.+....+
T Consensus 24 ~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~---~~~~---~~~~~~~~~lae~l~~~~~~~~~~ 97 (412)
T TIGR02407 24 AKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI---IHSL---DMATEAKREFLETFNEIILKPRGL 97 (412)
T ss_pred cccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc---eecc---ccCcHHHHHHHHHHHHhccCccCC
Confidence 33444455667789999776432 24689999999999875321 1110 112344555666554321111
Q ss_pred CCcEEE-cCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCccC----Cc
Q 045431 126 EGDIFV-SDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAEN----GF 196 (433)
Q Consensus 126 ~~~i~~-~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~----~~ 196 (433)
.+.+++ +++++++... + ........+|+..+.+|++........ +.......++.....+..+|..... +.
T Consensus 98 ~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 177 (412)
T TIGR02407 98 DYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDT 177 (412)
T ss_pred CceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhH
Confidence 134655 5788888775 3 122234478998899998876444333 2211111122111233444432110 00
Q ss_pred ccCCC----CC----CCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCC
Q 045431 197 FPDLS----TV----ARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK 266 (433)
Q Consensus 197 ~~~~~----~~----~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 266 (433)
...++ .. +++.+|+ ..| +++.|. ..+.+.+++|.++|++||+++|+||++..+...|.........-.+
T Consensus 178 ~~~l~~~~~~~~~~~~~~aavi-~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~P 256 (412)
T TIGR02407 178 IAYFEKLLEDSSSGVDLPAAVI-LETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEP 256 (412)
T ss_pred HHHHHHHHHhccCCCCceEEEE-eccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCC
Confidence 00011 11 2445555 455 788898 6799999999999999999999999998775544322221122224
Q ss_pred cceEEEeccccccccc-ccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcC----cCCh-hHHHH
Q 045431 267 EVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLS----PEGF-KAVHE 340 (433)
Q Consensus 267 ~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~----~~~~-~~~~~ 340 (433)
| +.++||.++ + |+|+|++++++++ . .+.......+.+.++++.+++.+.++ +... +++++
T Consensus 257 D----i~~~~K~lg-~~G~pigav~~~~~~-~--------~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~ 322 (412)
T TIGR02407 257 D----IVCLSKSIS-GYGLPLALTLIKPEL-D--------VWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQR 322 (412)
T ss_pred C----EEEechhcc-CCccceeEEEEchhh-h--------ccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 4 336899998 7 9999999998775 1 11112234455567775555454443 2211 22333
Q ss_pred HHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccC
Q 045431 341 VIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGH 417 (433)
Q Consensus 341 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~ 417 (433)
+.+.++++.+.+.+.+. ++.......|+++|+.++... ...+...++ ++||.+.+... ..+.+|++ +..+
T Consensus 323 ~g~~l~~~l~~l~~~~~--~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~-~~Gv~v~~~~~----~~~~lr~~p~l~~t 395 (412)
T TIGR02407 323 KSEIIQERLDRIVAEYP--ELIKQVRGRGLMQGIECGDGDLAGKIAKAAF-ENGLIIETSGP----NDEVIKLLPPLTID 395 (412)
T ss_pred HHHHHHHHHHHHHhhCC--CceEeeecceeEEEEEecChHHHHHHHHHHH-HCCCEEeccCC----CCCEEEEECCCCCC
Confidence 33333333333222221 122222347899999997433 334555555 45999976432 24679998 4679
Q ss_pred hhHHHHHHHHHHHhhC
Q 045431 418 RGNVLEACKRFKHLYK 433 (433)
Q Consensus 418 ~~~l~~~l~~l~~~l~ 433 (433)
++++++++++|.++++
T Consensus 396 ~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 396 EETLQQGLDILEQAVE 411 (412)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998864
No 226
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.6e-18 Score=165.89 Aligned_cols=214 Identities=17% Similarity=0.143 Sum_probs=143.2
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCccccccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKY 182 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 182 (433)
.+...+|++.+|+++ +. +++++++|+++++.+ +..++++||+|+++.|+|.+....++.+...+
T Consensus 52 np~~~~lE~~lA~l~----g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g--------- 116 (385)
T PRK08574 52 NPTLRPLEEALAKLE----GG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFG--------- 116 (385)
T ss_pred CccHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccC---------
Confidence 457889999999997 43 467778888888886 67889999999999999999877765443222
Q ss_pred ceEEEeecCccCCcccCCCCCC-CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc
Q 045431 183 GKIEYMRCTAENGFFPDLSTVA-RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~ 261 (433)
.++..+..+.+ .+...+ .+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.... ..++ .
T Consensus 117 ~~v~~~~~d~~-~l~~~i--~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~---~~~l-~ 186 (385)
T PRK08574 117 VKVVLAYPSTE-DIIEAI--KEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL---YRPL-R 186 (385)
T ss_pred cEEEEECCCHH-HHHHhc--CccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc---CChh-h
Confidence 24544433211 111111 23 7899999999999999998 67889999999999999999963211 1112 1
Q ss_pred cCCCCcceEEEecccccccccccce-eeeecc-ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHH
Q 045431 262 IPGAKEVAIETSSFSKYAGFTGVRL-GWTVIP-KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVH 339 (433)
Q Consensus 262 ~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 339 (433)
. +..+++.|++|.++.+|-.+ |++++. +++ .+++...........+++....+...++ .+.
T Consensus 187 ~----GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~--------~~~~~~~~~~~g~~~~p~~a~l~l~~l~-----tL~ 249 (385)
T PRK08574 187 H----GADFVVHSLTKYIAGHNDVVGGVAVAWSGEF--------LEELWEWRRRLGTIMQPFEAYLVLRGLK-----TLE 249 (385)
T ss_pred h----CCcEEEeeCceeecCCCCceeEEEEECcHHH--------HHHHHHHHHhcCCCCCHHHHHHHHcccC-----cHH
Confidence 1 23489999999997555544 656654 444 2444444433333344444433333333 345
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 045431 340 EVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 340 ~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+.++..++...+.+.|+++
T Consensus 250 ~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 250 VRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 56666677888888888876
No 227
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=2e-18 Score=165.19 Aligned_cols=266 Identities=16% Similarity=0.118 Sum_probs=168.7
Q ss_pred CHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHH----HhCCccccccccccc
Q 045431 107 EKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSV----IMGQTGEFQKDAEKY 182 (433)
Q Consensus 107 ~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~ 182 (433)
..+|++.+++++ +. ++++++++++.++.++..++++||+|+++++.|.+....+. ..|
T Consensus 49 ~~~le~~la~l~----g~--~~~l~~~sG~~al~~~l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G------------ 110 (378)
T TIGR01329 49 RTALESLLAKLD----KA--DRAFAFSSGMAALDVITRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSG------------ 110 (378)
T ss_pred HHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHHHHHcC------------
Confidence 456666677665 54 45666666677888765688999999999999988765433 345
Q ss_pred ceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc
Q 045431 183 GKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
.+++.++..+...+...+ .+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+.... ..++ ..
T Consensus 111 ~~v~~vd~~d~~~le~~i--~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~---~~~l-~~ 181 (378)
T TIGR01329 111 VVVVHVDTTDLDKVKAAL--GPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL---CNPL-EL 181 (378)
T ss_pred cEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc---CChh-hc
Confidence 367777664222222112 268899999999999999887 89999999999999999999853211 1222 22
Q ss_pred CCCCcceEEEeccccccccc-ccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHH
Q 045431 263 PGAKEVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEV 341 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 341 (433)
+ -.+++.|++|.++.+ +++.|+++++++.+ .+++...........++.....+. .+.+.+..+
T Consensus 182 -g---~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~-------~~~~~~~~~~~G~~~~~~~a~l~~-----~~l~tl~~R 245 (378)
T TIGR01329 182 -G---ADIVYHSATKFLAGHSDVMAGVLAVKGEEI-------AKKVYFLQNSTGSGLAPFDCWLLL-----RGIKTLAIR 245 (378)
T ss_pred -C---CcEEEEecceeccCCccceeEEEEeCcHHH-------HHHHHHHHHhcCCcCCHHHHHHHH-----ccCCCHHHH
Confidence 1 238899999988632 46789998865543 244444443223333444332222 223345666
Q ss_pred HHHHHHHHHHHHHHHhhc-CC-eeecC----------------CCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCC
Q 045431 342 IGFYKENTDIIVETFNSL-GF-KVYGG----------------KNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGF 402 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~-g~-~~~~~----------------~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f 402 (433)
.++-.++...+.+.|+++ .+ .+..| ..|..+.+.+.+.. ..+++..| +..++.+.-|...
T Consensus 246 ~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L-~~~~i~~s~G~~~ 324 (378)
T TIGR01329 246 IEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEAT-KLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhC-cCcccccCCCCCC
Confidence 777778888888888876 22 22111 12345667774333 33555554 6667777777654
Q ss_pred CC---------------------CCCCeEEEeecc
Q 045431 403 GP---------------------GGEGFIRVSAFG 416 (433)
Q Consensus 403 ~~---------------------~~~~~iRi~~~~ 416 (433)
.- -.++.||||++.
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl 359 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI 359 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 20 125689999865
No 228
>PRK05968 hypothetical protein; Provisional
Probab=99.84 E-value=2.2e-18 Score=165.59 Aligned_cols=265 Identities=16% Similarity=0.126 Sum_probs=168.4
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhh----hHHHhCCccccccccc
Q 045431 106 GEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVD----SSVIMGQTGEFQKDAE 180 (433)
Q Consensus 106 g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~ 180 (433)
-..+|++.+|++. +.+ +.+++++| +.++.+ +..++++||+|+++.++|.+... .+...|
T Consensus 64 ~~~~le~~lA~l~----g~~-~av~~~sG-~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G---------- 127 (389)
T PRK05968 64 TVRAFEEMLAKLE----GAE-DARGFASG-MAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMG---------- 127 (389)
T ss_pred hHHHHHHHHHHHh----CCC-cEEEECCH-HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcC----------
Confidence 4679999999986 553 45666555 567775 67788999999999999987543 334445
Q ss_pred ccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc
Q 045431 181 KYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 260 (433)
.+++.++.++...+.. ..+++++|++++|+||+ ++..++++|.++|++||+++|+|++|+...+.. + +
T Consensus 128 --~~v~~vd~~d~~~l~~---~i~~tklV~ie~pt~~~---~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p--~- 195 (389)
T PRK05968 128 --VEVDYVDGRDEEAVAK---ALPGAKLLYLESPTSWV---FELQDVAALAALAKRHGVVTMIDNSWASPVFQR-P--I- 195 (389)
T ss_pred --ceEEEeCCCCHHHHHH---hcccCCEEEEECCCCCC---CcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-c--h-
Confidence 3666665532212211 12578999997666655 556789999999999999999999998643321 2 2
Q ss_pred ccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHh-hccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 261 EIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVC-TCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
.. + ..+++.|+||.++.+| ++.|+++++++++ +++..... ......+++.+..+...|+ .+
T Consensus 196 ~~-g---~Divv~S~tK~l~g~~~~~gG~i~~~~~~~--------~~l~~~~~~~~g~~~~~~~A~~~l~~L~-----tl 258 (389)
T PRK05968 196 TL-G---VDLVIHSASKYLGGHSDTVAGVVAGSKEHI--------ARINAEAYPYLGAKLSPFEAWLLLRGLR-----TL 258 (389)
T ss_pred hc-C---CcEEEeeccccccCCCCeEEEEEEECHHHH--------HHHHHHHHHhCCCCCChHHHHHHHcccC-----cH
Confidence 11 1 2378889999997544 5789998887764 44443222 1223355555554444444 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCeeec-C-----------CCccEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCC-
Q 045431 339 HEVIGFYKENTDIIVETFNSL-GFKVYG-G-----------KNAPYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFG- 403 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~-----------~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~- 403 (433)
..+.++..++.+.+.+.|+++ ++..+. | ..|..+.+.+. +....++...| +..++.+.-|..+.
T Consensus 259 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L-~~~~~~~s~G~~~sl 337 (389)
T PRK05968 259 PLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADAL-KLFRLGVSWGGHESL 337 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhC-CccEEecCCCCCCce
Confidence 555666667788888999887 554332 2 12335666665 33334444444 44466666665554
Q ss_pred --C------------------CCCCeEEEeecc
Q 045431 404 --P------------------GGEGFIRVSAFG 416 (433)
Q Consensus 404 --~------------------~~~~~iRi~~~~ 416 (433)
+ ..++.||+|++.
T Consensus 338 v~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl 370 (389)
T PRK05968 338 VVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL 370 (389)
T ss_pred eeeCcccccccCCHHHHHhcCCCCCeEEEEecc
Confidence 0 115789999755
No 229
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-18 Score=169.35 Aligned_cols=354 Identities=10% Similarity=0.074 Sum_probs=213.6
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-C
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-E 126 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~ 126 (433)
+..+......+++..||+..|.- .+ ..++.+.+++.+++.+.. .+.......+.+..+|+.+.+..+.. .
T Consensus 44 ~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~------~~~~~~~~~~~~~~la~~l~~~~p~~~~ 117 (443)
T PRK06058 44 RAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT------HTCFMVTPYEGYVAVAEQLNRLTPGDHE 117 (443)
T ss_pred eeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc------CccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 34444455567788999977652 22 468999999999987531 11111223466666777765432322 2
Q ss_pred CcEEEcCChHHHHHH-HH--HhcCCCCEEEEeCCCChhhhhhHHHhCC-cccc-cccccccceEEEeecCcc-CC---c-
Q 045431 127 GDIFVSDGAKCDISR-LQ--IVFGSNVTMAVQDPSYPAYVDSSVIMGQ-TGEF-QKDAEKYGKIEYMRCTAE-NG---F- 196 (433)
Q Consensus 127 ~~i~~~~G~~~al~~-l~--~l~~~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~-~~~~~~~~~~~~~~~~~~-~~---~- 196 (433)
+.+++++++++|... +. ......++|+..+++|++.......+.. ...+ ..++.....+..++.... .. .
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLA 197 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccc
Confidence 578888888998875 32 2233457899999999987654443321 1000 000100112222221100 00 0
Q ss_pred ----------ccCCCC---CCCccEEEEcCCCCccc-cC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc
Q 045431 197 ----------FPDLST---VARTDIIFFCSPNNPTG-AA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261 (433)
Q Consensus 197 ----------~~~~~~---~~~~~~i~l~~p~nPtG-~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~ 261 (433)
...+++ ..++.+| +..|.+..| .. .+++.+++|.++|++||+++|.||++.+|...+.......
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~iAav-i~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~ 276 (443)
T PRK06058 198 TDGEEAAARAITVIEKQVGADNLAAV-IIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEH 276 (443)
T ss_pred cchHHHHHHHHHHHHHhhCCCceEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHh
Confidence 000111 1345554 467865554 43 4688999999999999999999999998866554322222
Q ss_pred cCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHH
Q 045431 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEV 341 (433)
Q Consensus 262 ~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 341 (433)
++-.+| ++ +++|.++ +|+++|+++++++++ +.+.......+.+.++++++++.+.|+.... +++
T Consensus 277 ~gv~PD-iv---~~gK~l~-~G~Pi~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~l 340 (443)
T PRK06058 277 EGIVPD-LI---TTAKGIA-GGLPLSAVTGRAEIM--------DAPHPGGLGGTYGGNPVACAAALAAIETIEE---DDL 340 (443)
T ss_pred cCCCCC-EE---EEccccc-CCCccEEEEEcHHHH--------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCH
Confidence 222244 33 5689998 999999999998874 3333333455667899999999999863221 345
Q ss_pred HHHHHHHHHHHHHHHhhc----CC-eeecCCCccEEEEECCCC----C----hHHHHHHHHHcCCeEecCCCCCCCCCCC
Q 045431 342 IGFYKENTDIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR----S----SWDVFSEILEKTHVVTTPGSGFGPGGEG 408 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~----~----~~~~~~~l~~~~gi~v~~g~~f~~~~~~ 408 (433)
.++++++.+++.+.|+++ ++ .-+.+ .|.++.+.+... . ...+...++ ++||.+.++..|+ +
T Consensus 341 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~~----~ 414 (443)
T PRK06058 341 VARARQIEALMTDRLRALAAEDDRIGDVRG-RGAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTYG----N 414 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEeeec-cceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCCC----C
Confidence 566666777777777654 22 11333 445555555311 1 123444444 4599998865442 5
Q ss_pred eEEEe--eccChhHHHHHHHHHHHhhC
Q 045431 409 FIRVS--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 409 ~iRi~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
.+|+. +..+++++++++++|.++++
T Consensus 415 ~lr~~Ppl~~t~~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 415 VIRLLPPLVIGDELLREGLDVLEAALA 441 (443)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHH
Confidence 89997 67799999999999998863
No 230
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=3.1e-18 Score=164.56 Aligned_cols=280 Identities=15% Similarity=0.184 Sum_probs=174.0
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhh----HHHhCCccccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDAE 180 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~ 180 (433)
.-..+|++.+|++. +.+ +.+++++| +.++.++..++++||+|++++|.|++.... ++..|
T Consensus 54 p~~~~le~~lA~l~----g~~-~~v~~~sG-~~ai~~~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G---------- 117 (390)
T PRK08064 54 PTREALEDIIAELE----GGT-KGFAFASG-MAAISTAFLLLSKGDHVLISEDVYGGTYRMITEVLSRFG---------- 117 (390)
T ss_pred hhHHHHHHHHHHHh----CCC-CeEEECCH-HHHHHHHHHHhCCCCEEEEccCccchHHHHHHHHHHHcC----------
Confidence 34678899999986 655 56777666 557776445789999999999999864433 33345
Q ss_pred ccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc
Q 045431 181 KYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 260 (433)
.++..++.++...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .++
T Consensus 118 --~~v~~v~~~d~~~l~~~l--~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---~~~- 186 (390)
T PRK08064 118 --IEHTFVDMTNLEEVAQNI--KPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ---KPL- 186 (390)
T ss_pred --CEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc---Cch-
Confidence 367777663211111111 357899999999999999987 788888899999999999998854221 112
Q ss_pred ccCCCCcceEEEeccccccc-ccccceeeeeccc-cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 261 EIPGAKEVAIETSSFSKYAG-FTGVRLGWTVIPK-ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~-~~G~r~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
.+ +..+++.|+||.++ .+|...|++++++ ++ .+.+...........++ +.+.. .+ .+.+.+
T Consensus 187 ~~----g~Divv~S~tK~~~G~~~~laG~~v~~~~~~--------~~~l~~~~~~~g~~~~~--~~a~l-~~--~gl~tl 249 (390)
T PRK08064 187 DL----GADVVLHSATKFLAGHSDVLAGLAVVKDEEL--------AQKLYFLQNSFGAVLGV--QDCWL-VL--RGLKTL 249 (390)
T ss_pred hh----CCcEEEeecceeccCCccceeEEEEeCCHHH--------HHHHHHHHHhcCCCCCH--HHHHH-HH--cccCcH
Confidence 22 23488999999985 2334567777654 44 35555554433322222 33222 22 233445
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC-C-eeecC----------------CCccEEEEECCCCChHHHHHHHHHcCCe---Eec
Q 045431 339 HEVIGFYKENTDIIVETFNSLG-F-KVYGG----------------KNAPYVWVQFPGRSSWDVFSEILEKTHV---VTT 397 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~g-~-~~~~~----------------~~g~~~~~~~~~~~~~~~~~~l~~~~gi---~v~ 397 (433)
..+.++..++...+.+.|+++. + .+..| ..|..+.+.+.+ .+.+..++...++ .+.
T Consensus 250 ~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~---~~~~~~f~~~l~l~~~~~s 326 (390)
T PRK08064 250 HVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS---EEAVRQFVSHVKLPVFAVS 326 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHhCCcceEccc
Confidence 6777777888888888888762 2 22111 123456677753 2334455566566 444
Q ss_pred CCCCC------------CC---------CCCCeEEEeecc--ChhHHHHHHHHHHHh
Q 045431 398 PGSGF------------GP---------GGEGFIRVSAFG--HRGNVLEACKRFKHL 431 (433)
Q Consensus 398 ~g~~f------------~~---------~~~~~iRi~~~~--~~~~l~~~l~~l~~~ 431 (433)
-|..+ .. -.++.+|+|++. .++.++.+.++|+++
T Consensus 327 ~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 327 LGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred CCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 44211 10 125789999754 455566666666553
No 231
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.83 E-value=2.7e-18 Score=178.93 Aligned_cols=342 Identities=15% Similarity=0.118 Sum_probs=211.8
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC----CCCCHHHHHHHHHHHhccCCCCCC--cEEEcCChHHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA----EQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCD 138 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~la~~l~~~~~~~~~--~i~~~~G~~~a 138 (433)
++.|..+....+++..+.+++.+.+.......+ ..|.. ..-..+.|+.+++++ +++++ +|++|+|++++
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~l----ga~~~~~~VvFtsnaT~a 109 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYF----NAPPSDYACVFTSGATAA 109 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHh----CCCccceEEEEeCChHHH
Confidence 688887765544555666665555443211111 12211 223667888888887 88665 58999999999
Q ss_pred HHHH-HHh-cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCc--------cCCcc---cCCCC---
Q 045431 139 ISRL-QIV-FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTA--------ENGFF---PDLST--- 202 (433)
Q Consensus 139 l~~l-~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~--- 202 (433)
++++ ..+ +++||+|++..-.|++.....+.+...| ..+..++.+. .+... .+++.
T Consensus 110 lnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G---------~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 180 (805)
T PLN02724 110 LKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKG---------AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNT 180 (805)
T ss_pred HHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcC---------CeEEeccchhccccccccccccccchhhhhhhhh
Confidence 9985 444 6899999998888888776554443333 2666666541 11111 11111
Q ss_pred ---------CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc-----CCEEEEeccccccccCCCCCcccccCCCCcc
Q 045431 203 ---------VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDN-----GSIIVYDSAYALYISDDNPRSIFEIPGAKEV 268 (433)
Q Consensus 203 ---------~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 268 (433)
.++++++.+++-+|-||..+|.+.++++.+.++.+ ++++++|.+++--. .+..+..++ .
T Consensus 181 ~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~---~piDv~~~~----~ 253 (805)
T PLN02724 181 SKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT---SPPDLSRYP----A 253 (805)
T ss_pred hhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC---CCCChhhcC----C
Confidence 13567888889999999999976554444433222 36899999987321 144444432 2
Q ss_pred eEEEeccccccc-ccccceeeeeccccccccCCcchh------------------H-HHHHHHhhccCCCcHHHHHHHHH
Q 045431 269 AIETSSFSKYAG-FTGVRLGWTVIPKELLFSDGFPVA------------------K-DFNRIVCTCFNGASNISQAGGLA 328 (433)
Q Consensus 269 vi~i~S~sK~~~-~~G~r~G~l~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~q~~~~~ 328 (433)
.+++.|++|++| ..| +|+++++++.+....+... . .-.++...+.+..+.++..+++.
T Consensus 254 Dfl~~S~HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~ 331 (805)
T PLN02724 254 DFVVVSFYKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK 331 (805)
T ss_pred CEEEEecceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence 488999999997 334 8999988876421111000 0 01222333333333344444444
Q ss_pred hcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-------CCeeecCC--------CccEEEEECCCCC----hHHHHHHHH
Q 045431 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSL-------GFKVYGGK--------NAPYVWVQFPGRS----SWDVFSEIL 389 (433)
Q Consensus 329 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------g~~~~~~~--------~g~~~~~~~~~~~----~~~~~~~l~ 389 (433)
++...+ ++++.++.++..+++.+.|+++ ++.++++. .+..+.+.+.+.+ ....+..++
T Consensus 332 ~l~~ig---~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~ 408 (805)
T PLN02724 332 LLNRLT---ISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLA 408 (805)
T ss_pred HHHHhC---hHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHH
Confidence 554333 4777888888999999999876 25666532 3445555555332 223356667
Q ss_pred HcCCeEecCCCCCCCC---------------------------------CCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 390 EKTHVVTTPGSGFGPG---------------------------------GEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 390 ~~~gi~v~~g~~f~~~---------------------------------~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.++||.++.|..|.+. ..+.+|+|| +++.+|++.+++.|++..
T Consensus 409 ~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 409 SLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 7789999999887521 137899996 679999999999998853
No 232
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.83 E-value=5.9e-18 Score=164.17 Aligned_cols=165 Identities=16% Similarity=0.197 Sum_probs=119.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh----HHHhCCc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQT 172 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~ 172 (433)
+..|+ .+-..+|++.+|++. +. +..++++++++++.. +..++++||+|++..+.|++.... +...|
T Consensus 51 ysr~~-~p~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G-- 121 (418)
T TIGR01326 51 YSRLM-NPTTDVLEQRIAALE----GG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG-- 121 (418)
T ss_pred eECCC-ChhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC--
Confidence 34453 345688999999986 53 456778888888876 678899999999999999765433 34455
Q ss_pred ccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Q 045431 173 GEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252 (433)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~ 252 (433)
.+++.++.++...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+....
T Consensus 122 ----------~~v~~v~~~d~~~l~~~l--~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~ 186 (418)
T TIGR01326 122 ----------IEVRFVDPDDPEEFEKAI--DENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL 186 (418)
T ss_pred ----------cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc
Confidence 366666653211111111 257899999999999999887 78899999999999999999974211
Q ss_pred CCCCCcccccCCCCcceEEEecccccccccccceeeeecccc
Q 045431 253 DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE 294 (433)
Q Consensus 253 ~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~ 294 (433)
..++ . .+..+++.|+||.++.+|+|+||+++++.
T Consensus 187 ---~~~l-~----~g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 187 ---CRPI-D----HGADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred ---CCch-h----cCCeEEEECccccccCCccceEEEEEecc
Confidence 1111 1 13469999999999988999999998653
No 233
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=7.6e-18 Score=160.55 Aligned_cols=214 Identities=16% Similarity=0.197 Sum_probs=144.9
Q ss_pred CCCCCCCCC---HHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhH----HHhC
Q 045431 99 SGYGAEQGE---KPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSS----VIMG 170 (433)
Q Consensus 99 ~~Y~~~~g~---~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g 170 (433)
..|+. .|+ ..|++.+|++. + .+++++++|+++|+.+ +.+++++||+|++++|.|++....+ ...|
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~----g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~g 114 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE----G--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMG 114 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh----C--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcC
Confidence 34653 455 59999999986 4 3589999999999986 6788999999999999998765433 2334
Q ss_pred CcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccc
Q 045431 171 QTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.++..++...+ ..+++ .+++|+|++++|+||+|.. .++++|+++|+++|+++|+|++|+
T Consensus 115 ------------i~v~~~d~~~~----e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 115 ------------VDITYYDPLIG----EDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred ------------cEEEEECCCCH----HHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCc
Confidence 25555443221 12222 3679999999999999875 459999999999999999999998
Q ss_pred ccccCCCCCcccccCCCCcceEEEeccccccccc-ccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHH
Q 045431 249 LYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 327 (433)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 327 (433)
..... .++ .. +..+++.|++|.++-+ +...|+++++++.+ +.+...........++....
T Consensus 176 ~g~~~---~pl-~~----gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~--------~~l~~~~~~~G~~l~p~~a~--- 236 (377)
T TIGR01324 176 AGLLF---KPL-EH----GVDISIQAGTKYLVGHSDIMIGTVVANARTW--------DQLREHSYLMGQMVDADDAY--- 236 (377)
T ss_pred ccccc---Ccc-cc----CceEEEecCceeccCCCCceEEEEEeCHHHH--------HHHHHHHHHhCCCCCHHHHH---
Confidence 42211 111 11 2348999999999633 35678888887653 33433222222233443322
Q ss_pred HhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 328 ACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 328 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
..+ .+.+.+..+.++..++...+.+.|+++
T Consensus 237 ~~~--rgl~tl~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 237 TTL--RGLRTLGVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred HHH--hhhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 222 233455666777788888888888876
No 234
>PLN02509 cystathionine beta-lyase
Probab=99.82 E-value=7.2e-18 Score=163.46 Aligned_cols=220 Identities=18% Similarity=0.202 Sum_probs=143.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhH----HHhCCccc
Q 045431 99 SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSS----VIMGQTGE 174 (433)
Q Consensus 99 ~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~ 174 (433)
..|+.. |.+ .++++.+++++..+ .++.++++|+++++.++..++++||+|++++|.|+++...+ ...|
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G---- 196 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK--ADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSG---- 196 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCC----
Confidence 467554 665 57777777765333 35666767778888876678999999999999999876444 3445
Q ss_pred ccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Q 045431 175 FQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDD 254 (433)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~ 254 (433)
..+..++..+...+...+ .+++++|++++|+||||.+ .++++|+++|++||+++|+|++|+.... +
T Consensus 197 --------~~v~~vd~~d~e~l~~ai--~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~ 262 (464)
T PLN02509 197 --------VVVKRVNTTNLDEVAAAI--GPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVL-S 262 (464)
T ss_pred --------eEEEEeCCCCHHHHHHhC--CcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccccc-C
Confidence 355555543211111111 3578999999999999985 5599999999999999999999874322 1
Q ss_pred CCCcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcC
Q 045431 255 NPRSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPE 333 (433)
Q Consensus 255 ~~~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 333 (433)
.+ + .. +..+++.|++|.++.+| .-.|++++.++.+ .+.+...........++.....+. .
T Consensus 263 ~p--l-~~----gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l-------~~~~~~~~~~~g~~l~p~~A~l~l-----r 323 (464)
T PLN02509 263 RP--L-EL----GADIVMHSATKFIAGHSDVMAGVLAVKGEKL-------AKEVYFLQNSEGSGLAPFDCWLCL-----R 323 (464)
T ss_pred Ch--h-hc----CCcEEEecCcccccCCCccceeEEEeccHHH-------HHHHHHHHHhcCCCcCHHHHHHHH-----h
Confidence 11 1 11 12388999999986323 2357777655543 233332222222223333322222 2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 334 GFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+.+..+.++.+++++.+.+.|+++
T Consensus 324 ~L~tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 324 GIKTMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 34556778888889999999999887
No 235
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.82 E-value=1.1e-17 Score=160.66 Aligned_cols=305 Identities=11% Similarity=0.113 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh-cCCCCEEEEeC
Q 045431 79 EVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV-FGSNVTMAVQD 156 (433)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l-~~~gd~Vl~~~ 156 (433)
+.-.+++.+.+.. .. .| |..++++++++++++.++. +++++++|+++++.+ +..+ +++||+|+++.
T Consensus 11 ~~~~~~~~~~l~~----~~--~~----g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~ 78 (375)
T PRK11706 11 GTELDYIQQAMSS----GK--LC----GDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPS 78 (375)
T ss_pred HHHHHHHHHHHHc----CC--cc----CCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECC
Confidence 3445667766642 11 12 3456667776666554344 689999999999987 4444 68999999999
Q ss_pred CCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCC---CC--CCCccEEEEcCCCCccccCCCHHHHHHHH
Q 045431 157 PSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---ST--VARTDIIFFCSPNNPTGAAATREQLTRLV 231 (433)
Q Consensus 157 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~ 231 (433)
|+|+.+...+...| .+++.+++++++ +..++ ++ .+++++|+++ |+||...+ +++|.
T Consensus 79 ~t~~~~~~~~~~~G------------~~~v~~d~d~~~-~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~---~~~i~ 139 (375)
T PRK11706 79 YTFVSTANAFVLRG------------AKIVFVDIRPDT-MNIDETLIEAAITPKTRAIVPV---HYAGVACE---MDTIM 139 (375)
T ss_pred CCcHHHHHHHHHcC------------CEEEEEecCCCc-CCcCHHHHHHhcCCCCeEEEEe---CCCCCccC---HHHHH
Confidence 99999999999888 478888887543 33332 22 3578888875 46898766 78899
Q ss_pred HHHHHcCCEEEEeccccccc-cCCCCCcccccCCCCcceEEEeccc--ccccccccceeeeeccccccccCCcchhHHHH
Q 045431 232 QFAKDNGSIIVYDSAYALYI-SDDNPRSIFEIPGAKEVAIETSSFS--KYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN 308 (433)
Q Consensus 232 ~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~vi~i~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 308 (433)
++|++||++||+|++|+.+. +.+. ++..+ .+ +.+.||+ |.++ +|.+.++++.++++. +++.
T Consensus 140 ~la~~~~i~vIeD~a~a~g~~~~~~--~~g~~---~~--~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~--------~~~~ 203 (375)
T PRK11706 140 ALAKKHNLFVVEDAAQGVMSTYKGR--ALGTI---GH--IGCFSFHETKNYT-AGEGGALLINDPALI--------ERAE 203 (375)
T ss_pred HHHHHcCCEEEEECccccccccCCe--eeecC---cC--EEEEeCCCCcccc-ccCCeEEEECCHHHH--------HHHH
Confidence 99999999999999999654 3322 22222 11 3334544 9996 788877777666664 3333
Q ss_pred HHHhhc-----------------cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC----Ceee-cC
Q 045431 309 RIVCTC-----------------FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG----FKVY-GG 366 (433)
Q Consensus 309 ~~~~~~-----------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~-~~ 366 (433)
...... ..+.+...+....++.. ...+.+++..++-+++.+.+.+.|.++. +.+. .+
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~ 282 (375)
T PRK11706 204 IIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIP 282 (375)
T ss_pred HHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCC
Confidence 333211 01222221111111111 1113345556666666677777777652 3322 12
Q ss_pred CC----ccEEEEECCC-CChHHHHHHHHHcCCeEecCCC----CC---CC----CC---------CCeEEEeec--cChh
Q 045431 367 KN----APYVWVQFPG-RSSWDVFSEILEKTHVVTTPGS----GF---GP----GG---------EGFIRVSAF--GHRG 419 (433)
Q Consensus 367 ~~----g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~----~f---~~----~~---------~~~iRi~~~--~~~~ 419 (433)
.+ ..++|+.++. ....++.+.|. ++||.+.... .. .. .. ...+-|-+. .+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~ 361 (375)
T PRK11706 283 DDCKHNAHMFYIKLRDLEDRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDV 361 (375)
T ss_pred CCCceeeEEEEEEECCcCCHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHH
Confidence 12 2356777763 34455665554 4599875432 00 00 00 123444332 3789
Q ss_pred HHHHHHHHHHHhh
Q 045431 420 NVLEACKRFKHLY 432 (433)
Q Consensus 420 ~l~~~l~~l~~~l 432 (433)
+++..++.|++++
T Consensus 362 ~~~~i~~~i~~~~ 374 (375)
T PRK11706 362 EQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998875
No 236
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1.1e-17 Score=159.87 Aligned_cols=216 Identities=19% Similarity=0.222 Sum_probs=140.3
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHH-HhCCccccccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSV-IMGQTGEFQKDAEKY 182 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~ 182 (433)
.....+|++.+|++. +.+ +.+++.+| ++++.++..++++||+|++++|+|++....+. .+...+
T Consensus 49 ~p~~~~Le~~lA~l~----g~~-~~~~~~sG-~aai~~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G--------- 113 (377)
T PRK07671 49 NPTRAALEELIAVLE----GGH-AGFAFGSG-MAAITAVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFG--------- 113 (377)
T ss_pred ChHHHHHHHHHHHHh----CCC-ceEEeCCH-HHHHHHHHHHhCCCCEEEECCCccchHHHHHHHHHhcCC---------
Confidence 345788999999986 543 45666666 46777666788999999999999985443332 222222
Q ss_pred ceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc
Q 045431 183 GKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
.+++.++..+...+...+ .+++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .+ + ..
T Consensus 114 ~~v~~v~~~d~~~l~~ai--~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~p--~-~~ 184 (377)
T PRK07671 114 IEHTFVDTSNLEEVEEAI--RPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-SP--I-SL 184 (377)
T ss_pred eEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-Ch--h-hh
Confidence 366666543211211111 357899999999999999876 888888899999999999999753222 12 2 12
Q ss_pred CCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHH
Q 045431 263 PGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEV 341 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 341 (433)
+..+++.|+||.++.++ .-.|+++++++.+ .+.+...+.......++.....+. + +.+.+..+
T Consensus 185 ----g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l-------~~~~~~~~~~~g~~~~~~~a~l~~---~--~l~tl~~R 248 (377)
T PRK07671 185 ----GADIVLHSATKYLGGHSDVVAGLVVVNSPEL-------AEDLHFVQNSTGGILGPQDSWLLL---R--GLKTLGIR 248 (377)
T ss_pred ----CCeEEEecCcccccCCccceeEEEEeCcHHH-------HHHHHHHHHhhcCCCCHHHHHHHH---c--CcChHHHH
Confidence 12488999999997332 2346666654332 355555444433334443333222 2 23445667
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 045431 342 IGFYKENTDIIVETFNSL 359 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~ 359 (433)
.++..++...+.+.|+++
T Consensus 249 ~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 778889999999999886
No 237
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.82 E-value=2.3e-18 Score=167.56 Aligned_cols=354 Identities=11% Similarity=0.061 Sum_probs=202.8
Q ss_pred HHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC--CC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EE 126 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~--~~ 126 (433)
..+......+++..||+..|... -..+|.+.+++.+++.+...... ..+ ..+.+..+++.+.+.+.. ..
T Consensus 28 ~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~-----~~~~~~~lae~l~~~~~~~~~~ 101 (425)
T PRK09264 28 AKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHG-LDM-----HTTAKREFLETFEETILKPRGL 101 (425)
T ss_pred eecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccc-ccc-----CcHHHHHHHHHHHHhhcCCcCC
Confidence 33444445667789999777432 23689999999998875321111 111 124455555555432111 12
Q ss_pred C-cEEE-cCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCcc-----CC
Q 045431 127 G-DIFV-SDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAE-----NG 195 (433)
Q Consensus 127 ~-~i~~-~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----~~ 195 (433)
+ .+++ ++++++|... + ........+|+..+.+|++........ +.......++.....+..+|.... ++
T Consensus 102 ~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (425)
T PRK09264 102 DYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDT 181 (425)
T ss_pred CceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhH
Confidence 2 5655 5788888775 3 222334467888888888865443333 221111112221223444544311 01
Q ss_pred c---ccCCCCC----CCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCC
Q 045431 196 F---FPDLSTV----ARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK 266 (433)
Q Consensus 196 ~---~~~~~~~----~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 266 (433)
+ ...++.. +++.+| +..| +.-.|. +.+.+.+++|.++|++||+++|+||++.++...|........+-.+
T Consensus 182 ~~~l~~~l~~~~~~~~~~aav-i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P 260 (425)
T PRK09264 182 LAYLEKLLEDSSSGVDLPAAV-IVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP 260 (425)
T ss_pred HHHHHHHHHhccCCCCceEEE-EEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC
Confidence 0 0001111 234454 4556 555675 5689999999999999999999999998775555332222222224
Q ss_pred cceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHH
Q 045431 267 EVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYK 346 (433)
Q Consensus 267 ~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 346 (433)
| +.++||.++..|+++|++++++++. .+.......+.+.++++..++.+.++..-.+ .+..++++
T Consensus 261 D----i~t~~K~l~~~G~pigav~~~~~i~---------~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~ 325 (425)
T PRK09264 261 D----IVTLSKSISGYGLPMALVLIKPELD---------VWKPGEHNGTFRGNNLAFVTATAALEEYWSD--DAFEKEVK 325 (425)
T ss_pred C----EEEeccccCCCccceEEEEEchhhh---------ccCCCccCCCCCCCHHHHHHHHHHHHHHHhh--hHHHHHHH
Confidence 4 3377999984399999999987752 1211123344556677776666666311111 23455555
Q ss_pred HHHHHHHHHHhhc----C-CeeecCCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccCh
Q 045431 347 ENTDIIVETFNSL----G-FKVYGGKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHR 418 (433)
Q Consensus 347 ~~~~~l~~~l~~~----g-~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~ 418 (433)
++.+.+.+.|+++ + +.......|+++|+.++... ...+...++ +.||.+.+...+ ...+|++. ..++
T Consensus 326 ~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~ 400 (425)
T PRK09264 326 AKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAF-ENGLIIETSGPE----DEVVKLLPPLTIDE 400 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHH-HCCCEEeccCCC----CCEEEEeCCCCCCH
Confidence 6666666555442 2 21111235788899997432 334555555 459999875322 36788883 4689
Q ss_pred hHHHHHHHHHHHhh
Q 045431 419 GNVLEACKRFKHLY 432 (433)
Q Consensus 419 ~~l~~~l~~l~~~l 432 (433)
+++++++++|.+++
T Consensus 401 ~ei~~~~~~l~~~l 414 (425)
T PRK09264 401 EELEEGLDILEEAV 414 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998875
No 238
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=2.9e-18 Score=167.05 Aligned_cols=352 Identities=12% Similarity=0.045 Sum_probs=208.1
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+.++......+++..+|+..|.. .+ ..+|.+.+++.+++.+... .....|. .+.+..+|+.+.+..+...+
T Consensus 30 ~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~-----~~~~~~la~~l~~~~p~~~~ 103 (423)
T PRK05964 30 RAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDH-VIFAGFT-----HEPAERLAQRLVALTPGGLD 103 (423)
T ss_pred eccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCC-ccccccC-----CHHHHHHHHHHHHhCCCCCC
Confidence 34444455566788999977643 22 3678999999999876421 1111221 24445556665442232346
Q ss_pred cEEEcCChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhHHHhCCcccccc-cccccceEEEeecCccCCc-
Q 045431 128 DIFVSDGAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK-DAEKYGKIEYMRCTAENGF- 196 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~- 196 (433)
.+++++++++|+.....+. ....+|+..+-+|++.......+.....+.. +.........++...++..
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 183 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQ 183 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHH
Confidence 8999999999988632221 1236788889999886544433332221110 0000012233333221100
Q ss_pred --ccCCC----C-CCCccEEEEcCC--CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCC
Q 045431 197 --FPDLS----T-VARTDIIFFCSP--NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAK 266 (433)
Q Consensus 197 --~~~~~----~-~~~~~~i~l~~p--~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 266 (433)
...++ . ..++.+|++ .| ++..|... +.+.+++|.++|++||+++|+||++.++...+...........+
T Consensus 184 ~~~~~l~~~l~~~~~~iaavi~-Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~p 262 (423)
T PRK05964 184 ATLDALEALLEKHAGEIAAFIV-EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSP 262 (423)
T ss_pred HHHHHHHHHHHhCCCcEEEEEE-ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCC
Confidence 11111 1 134555554 55 67778766 89999999999999999999999998775555322221222123
Q ss_pred cceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH------HHhhccCCCcHHHHHHHHHhcCcCChhHHH
Q 045431 267 EVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR------IVCTCFNGASNISQAGGLACLSPEGFKAVH 339 (433)
Q Consensus 267 ~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 339 (433)
| +.+++|.++ .| +++|++++++++. +.+.. ....++.+.++++.+++.+.++.... +
T Consensus 263 D----i~~~~K~l~-gG~~p~~av~~~~~i~--------~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~ 326 (423)
T PRK05964 263 D----IMCLSKGLT-GGYLPLAATLCTAEIF--------EAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---E 326 (423)
T ss_pred C----eeeeehhhh-cCcccceEEEEcHHHH--------HhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---c
Confidence 3 347899997 56 8999999988874 33321 12233445688888888777762211 2
Q ss_pred HHHHHHHHHHHHHHHHHhhc-CCeeec--CCCccEEEEECCCCC----hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEE
Q 045431 340 EVIGFYKENTDIIVETFNSL-GFKVYG--GKNAPYVWVQFPGRS----SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRV 412 (433)
Q Consensus 340 ~~~~~~~~~~~~l~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~----~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 412 (433)
.+.++.++..+.+.+.|+++ +..... ...|+++.+.+.... ...+...++ ++||.+.+. .+.+|+
T Consensus 327 ~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~-------~~~lR~ 398 (423)
T PRK05964 327 PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL-------GNTIYL 398 (423)
T ss_pred CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec-------CCEEEE
Confidence 34455566666666666654 222211 124566667765322 344555555 459999763 147999
Q ss_pred e--eccChhHHHHHHHHHHHhhC
Q 045431 413 S--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 413 ~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
+ +..+++|+++++++|+++++
T Consensus 399 ~p~l~~t~edId~~v~~l~~al~ 421 (423)
T PRK05964 399 MPPYIITAEELDRITDAIVEVAD 421 (423)
T ss_pred eCCcccCHHHHHHHHHHHHHHHh
Confidence 9 46799999999999998863
No 239
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.81 E-value=1.3e-17 Score=157.57 Aligned_cols=320 Identities=13% Similarity=0.123 Sum_probs=201.3
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCH---HHHHHHHHHHhccCCCC-CCcEEEcCC-hHHHHHH-HHHhcCCC
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEK---PLRAAIASTFYKDLGIE-EGDIFVSDG-AKCDISR-LQIVFGSN 149 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~---~lr~~la~~l~~~~~~~-~~~i~~~~G-~~~al~~-l~~l~~~g 149 (433)
..|..+.+++.+.+....+ .+...|....-.+ ++-+.+.+.+.+-++.+ ..+|++++| ++.++++ +..++.+|
T Consensus 2 ~~p~~v~~~~~~~~~~~~~-~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~ 80 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNG-TGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEG 80 (349)
T ss_pred CCCHHHHHHHHHHHhCccC-CCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCC
Confidence 3688899999999886542 4444443333344 44333444444444653 457888877 9999998 68888899
Q ss_pred CEEEEeCCCChhh--hhhHHHhCCcccccccccccceEEEeecCccC----CcccC-CCCCCCccEEEEcCCCCccccCC
Q 045431 150 VTMAVQDPSYPAY--VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN----GFFPD-LSTVARTDIIFFCSPNNPTGAAA 222 (433)
Q Consensus 150 d~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~l~~p~nPtG~~~ 222 (433)
|++++...+..+. ...++..|. +..+..++.. ....+ ++..+++++|.+++..+.||+..
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~ 147 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-------------VNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEF 147 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-------------cEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEec
Confidence 9998888777664 344455552 3333322111 11111 23345889999999999999976
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcc
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFP 302 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 302 (433)
+ ++++.+++++++|.+.+-. ..+..+..+ + +++.|..|.+|.+| +|+++++++.+.+..+.
T Consensus 148 ~--------~l~~~~~~l~iVDavss~g---~~~id~~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~ 208 (349)
T TIGR01364 148 R--------ELPDVKNAPLVADMSSNIL---SRPIDVSKF----G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRI 208 (349)
T ss_pred c--------eecccCCCeEEEEcccccc---CccCCHHHc----c--EEEEecccccCCCc--eEEEEECHHHHhhcccC
Confidence 5 5566789999999998832 123434332 2 88889999999777 89999999886432111
Q ss_pred hhH--HHHHHH--hhccCCCcHHHHHHHHHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhc-CCeeec--C--CCccEE
Q 045431 303 VAK--DFNRIV--CTCFNGASNISQAGGLACLSPEGFK-AVHEVIGFYKENTDIIVETFNSL-GFKVYG--G--KNAPYV 372 (433)
Q Consensus 303 ~~~--~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--~--~~g~~~ 372 (433)
... ++.... .....+++.....+..++++..... .++++.++.++..+++++.|+++ |+.... + .....+
T Consensus 209 ~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~ 288 (349)
T TIGR01364 209 TPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNV 288 (349)
T ss_pred CCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEE
Confidence 000 111111 1112344444444444444422223 36899999999999999999999 564432 1 122446
Q ss_pred EEECCCC-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhhC
Q 045431 373 WVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 373 ~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
.+.+++. ...++...+ .+.|+.+.+|.. ..+.||+|+ +++.+|++.+++.|+++++
T Consensus 289 sf~~~~~~~~~~~~~~~-~~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 289 VFTLGNEELEKRFLKEA-EERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred EEecCChhHhHHHHHHH-HHCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 6676643 223444444 456997777654 236899995 5689999999999998753
No 240
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.81 E-value=6.4e-19 Score=163.47 Aligned_cols=165 Identities=15% Similarity=0.183 Sum_probs=119.8
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccc
Q 045431 103 AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEK 181 (433)
Q Consensus 103 ~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 181 (433)
|..-..++++.+|+++ +.+ +-+++|+|+++++.+ +.+++++||+|++++|+|.++...+...|.
T Consensus 57 ~~g~i~~~~~~~A~~~----ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~---------- 121 (294)
T cd00615 57 PTGPIKEAQELAARAF----GAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGA---------- 121 (294)
T ss_pred CChHHHHHHHHHHHHh----CCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCC----------
Confidence 3444778889999987 643 445569999999886 688899999999999999999888888883
Q ss_pred cceEEEeecCccCCc----ccC---CC----CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc-
Q 045431 182 YGKIEYMRCTAENGF----FPD---LS----TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL- 249 (433)
Q Consensus 182 ~~~~~~~~~~~~~~~----~~~---~~----~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~- 249 (433)
.++.++.+.+.++ ..+ ++ +.++++++++++| ||||.+++ +++|+++|+++|+++|+|++|+.
T Consensus 122 --~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~ 195 (294)
T cd00615 122 --VPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAH 195 (294)
T ss_pred --EEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhh
Confidence 5666655433211 112 11 1257899999999 78999998 78999999999999999999975
Q ss_pred cccCCC-CCcccccCCCCcceEEEeccccccccccccee-eeecccc
Q 045431 250 YISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG-WTVIPKE 294 (433)
Q Consensus 250 ~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G-~l~~~~~ 294 (433)
+.+.+. +.+... .+..+++.|++|++ +|++.| ++..+..
T Consensus 196 ~~~~~~~~~~~~~----~~~div~~S~hK~l--~g~~~~~~l~~~~~ 236 (294)
T cd00615 196 FRFHPILPSSAAM----AGADIVVQSTHKTL--PALTQGSMIHVKGD 236 (294)
T ss_pred hccCcccCcchhh----cCCcEEEEchhccc--chHhHHHHHHhCCC
Confidence 334332 211111 24569999999986 778765 4555554
No 241
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=1.4e-17 Score=161.50 Aligned_cols=335 Identities=12% Similarity=0.050 Sum_probs=190.2
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHH-hhcccCCCCCCC-CCCCCCHHHHH----HHHHHHhccCCCCCCcEEEcCChHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRS-YALSTQEGYSGY-GAEQGEKPLRA----AIASTFYKDLGIEEGDIFVSDGAKC 137 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~Y-~~~~g~~~lr~----~la~~l~~~~~~~~~~i~~~~G~~~ 137 (433)
..+++-.+++- .+|.+.+++...+ .+++.......+ +-.....+|.+ .+++++ +.+ ..++.+++++.
T Consensus 29 ~~~~l~~sen~--~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~----g~~-~alv~~~SG~~ 101 (416)
T PRK13034 29 DHLELIASENF--TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF----GCD-YANVQPHSGSQ 101 (416)
T ss_pred cCeeecccccC--CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh----CCC-ceEEecCCcHH
Confidence 35776655543 5888898988885 555322222222 11234556666 677765 544 33344555566
Q ss_pred HHHH-HHHhcCCCCEEEEeCCCChhh-hhhHHHhCCcccccccccccceEEEeecCccCC-cccC-CCC---CCCccEEE
Q 045431 138 DISR-LQIVFGSNVTMAVQDPSYPAY-VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENG-FFPD-LST---VARTDIIF 210 (433)
Q Consensus 138 al~~-l~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~---~~~~~~i~ 210 (433)
|+.+ +.++++|||+|+++..+|.+. ....+...... ......++++.... .+.+ +++ ..++++|+
T Consensus 102 A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi 173 (416)
T PRK13034 102 ANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGK--------WYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLII 173 (416)
T ss_pred HHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccc--------eeeeEEcccccccCCcCHHHHHHHHhhcCCeEEE
Confidence 6654 788899999999999999762 22111100000 01112333322111 1111 111 23578877
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 290 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~ 290 (433)
+.++. +|+..+ +.+|.++|++||+++|+|++|+....... .....+ .+..++++|++|+++.+. -|+++
T Consensus 174 ~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g-~~~~~~---~~~Di~~~s~~K~l~g~~--GG~v~ 242 (416)
T PRK13034 174 AGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAG-EHPNPF---PHAHVVTTTTHKTLRGPR--GGMIL 242 (416)
T ss_pred ECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccC-CCCCCC---CCceEEEEeCcccCCCCC--CeEEE
Confidence 65554 466555 77888889999999999999985333221 111111 123488999999994222 37777
Q ss_pred ccccccccCCcchhHHHHHHHhhcc-CCCcHHHHHHHH-HhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecC-C
Q 045431 291 IPKELLFSDGFPVAKDFNRIVCTCF-NGASNISQAGGL-ACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGG-K 367 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~ 367 (433)
++++.+ ...++....... ....+...+++. ++++... ....+.++++.++.+++.+.|++.|+.+..+ .
T Consensus 243 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~-~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~ 314 (416)
T PRK13034 243 TNDEEI-------AKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ-PEFKTYAKQVIANAQALAEVLKERGYDLVSGGT 314 (416)
T ss_pred ECcHHH-------HHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCC
Confidence 766553 233332221111 112222222222 2222111 1224567899999999999999889988643 4
Q ss_pred CccEEEEECCC-CChHHHHHHHHHcCCeEecC----CCCCCCCCCCeEEEee------ccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPG-RSSWDVFSEILEKTHVVTTP----GSGFGPGGEGFIRVSA------FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~----g~~f~~~~~~~iRi~~------~~~~~~l~~~l~~l~~~l 432 (433)
.+..+++.+.. ......+...++++||.+.+ +..-.+..+..+|++. ..+++|++++++.|++++
T Consensus 315 ~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~ 390 (416)
T PRK13034 315 DNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVL 390 (416)
T ss_pred CCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 56777787763 22434444445666999964 2110122356799994 236899999999998875
No 242
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.81 E-value=1.9e-17 Score=158.29 Aligned_cols=277 Identities=17% Similarity=0.177 Sum_probs=177.7
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh-cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV-FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEK 181 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 181 (433)
.....++++.+++++ +. +++++++|+++++.+ +..+ +++||+|+++.++|..+...+...|
T Consensus 17 ~~~~~~~~~~la~~~----~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g----------- 79 (352)
T cd00616 17 GPKVREFEKAFAEYL----GV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLG----------- 79 (352)
T ss_pred CHHHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcC-----------
Confidence 346889999999997 53 467778888889887 5556 5899999999999999988888888
Q ss_pred cceEEEeecCccCCcccCC---CC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 182 YGKIEYMRCTAENGFFPDL---ST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~---~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.+++.++.+.+ .+..++ +. .+++++|+++ ||+|...+ +++|.++|+++|+++|+|++|+...... .
T Consensus 80 -~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~-~ 150 (352)
T cd00616 80 -ATPVFVDIDPD-TYNIDPELIEAAITPRTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYK-G 150 (352)
T ss_pred -CeEEEEecCCC-cCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeEC-C
Confidence 47777777542 222222 21 3578888875 46898877 7888888999999999999998432211 1
Q ss_pred CcccccCCCCcceEEEeccc--ccccccccceeeeeccc-cccccCCcchhHHHHHHHhhc---------------cCCC
Q 045431 257 RSIFEIPGAKEVAIETSSFS--KYAGFTGVRLGWTVIPK-ELLFSDGFPVAKDFNRIVCTC---------------FNGA 318 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~s--K~~~~~G~r~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 318 (433)
..+... . .+.+.|++ |.++ +.+.|++++++ +++ +.+....... ....
T Consensus 151 ~~~~~~---~--d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd00616 151 RKVGTF---G--DAGAFSFHPTKNLT--TGEGGAVVTNDEELA--------ERARLLRNHGRDRDRFKYEHEILGYNYRL 215 (352)
T ss_pred EEcccC---c--ceeEEcCCCCCCCc--ccCceEEEECCHHHH--------HHHHHHHHcCCCCCCCccccceeeeccCc
Confidence 111111 1 25666766 9884 33468888765 442 3333222111 1112
Q ss_pred cHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCC-----ccEEEEECC---CCChHHHHHHHH
Q 045431 319 SNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKN-----APYVWVQFP---GRSSWDVFSEIL 389 (433)
Q Consensus 319 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-----g~~~~~~~~---~~~~~~~~~~l~ 389 (433)
+.+...++... ...+++..++.+++.+++.+.|.++ |+++..+.. ...+.+.++ +.+..++.+.|.
T Consensus 216 ~~~~aa~~~~~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~ 290 (352)
T cd00616 216 SEIQAAIGLAQ-----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALK 290 (352)
T ss_pred CHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHH
Confidence 23322222221 2334667777888899999999986 777654322 234455555 345666776665
Q ss_pred HcCCeEecCCCCCCCC----------------C-------CCeEEEee--ccChhHHHHHHHHHH
Q 045431 390 EKTHVVTTPGSGFGPG----------------G-------EGFIRVSA--FGHRGNVLEACKRFK 429 (433)
Q Consensus 390 ~~~gi~v~~g~~f~~~----------------~-------~~~iRi~~--~~~~~~l~~~l~~l~ 429 (433)
++||.+.. .|.+. . .+.+|+++ +.+++|++..++.|+
T Consensus 291 -~~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 291 -EAGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred -HCCCCeee--ecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 45996642 22110 0 25799995 568999999998874
No 243
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.81 E-value=6e-18 Score=161.08 Aligned_cols=317 Identities=14% Similarity=0.146 Sum_probs=194.0
Q ss_pred CCCChHHHHHHHHHHHhhcccCCCCCCCCCC-------CCCHHHHHHHHHHHhccCCC-CCCcEEEcCC-hHHHHHH-HH
Q 045431 74 TEPIPEVITSALAKRSYALSTQEGYSGYGAE-------QGEKPLRAAIASTFYKDLGI-EEGDIFVSDG-AKCDISR-LQ 143 (433)
Q Consensus 74 ~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~-------~g~~~lr~~la~~l~~~~~~-~~~~i~~~~G-~~~al~~-l~ 143 (433)
+.+.|+.+.+++.+.+..+. ..+...|... .-..+.|+.+++++ ++ ++++|++|+| +|+++++ +.
T Consensus 7 p~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~----~~~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELL----NIPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCCchHHHHHHHH
Confidence 35689999999999886543 2333334332 22456777777776 76 5678999988 9999997 57
Q ss_pred HhcC---CCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCc-c-cC---CCCCCCccEEEEcCCC
Q 045431 144 IVFG---SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF-F-PD---LSTVARTDIIFFCSPN 215 (433)
Q Consensus 144 ~l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~~~~~~~~~i~l~~p~ 215 (433)
.++. +||.|++ .|.........+..| .++..++.+.++.+ . ++ .+..+++++|.+++.+
T Consensus 82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~ 148 (355)
T cd00611 82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYG------------GVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNE 148 (355)
T ss_pred hcCCCCCeEEEEEC-CHHHHHHHHHHHhcC------------CCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCc
Confidence 7776 5555543 222222233445555 35666665432222 1 22 1224689999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|.||+.++ ++++.||+++++|.+.+... .+..+..+ + +.+.|..|.+|.+| +|+++++++.
T Consensus 149 t~tG~~~~--------~i~~~~g~~~~VDa~qs~g~---~~idv~~~----~--~~~ss~~K~lGP~G--~g~l~~~~~~ 209 (355)
T cd00611 149 TIHGVEFD--------EVPDTGGVPLVADMSSNILS---RPIDVSKF----G--VIYAGAQKNLGPAG--VTVVIVRKDL 209 (355)
T ss_pred ccccEEcc--------eecccCCCeEEEEccccccC---CCCCHHHh----C--EEEeecccccCCCc--eEEEEECHHH
Confidence 99999743 33445999999999988421 13444332 2 45666899998777 8999999988
Q ss_pred cccCCcchhH--HHHH-HHhhc-cCCCcHHHHHHHHHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhc-CCe-ee-cC-
Q 045431 296 LFSDGFPVAK--DFNR-IVCTC-FNGASNISQAGGLACLSPEGFK-AVHEVIGFYKENTDIIVETFNSL-GFK-VY-GG- 366 (433)
Q Consensus 296 ~~~~~~~~~~--~~~~-~~~~~-~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~-~~- 366 (433)
+.+..+.... .+.. ..... ..+++.....+..++++-.... .++.+.++.++..+++.+.|+++ |+. .. .+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~ 289 (355)
T cd00611 210 LGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKR 289 (355)
T ss_pred HhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHH
Confidence 6431111000 0111 01111 2334433444333443311112 36888999999999999999998 863 21 11
Q ss_pred -CCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 367 -KNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 367 -~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
..+..+.+.+++. ...++...+ .+.|+.+.+|.. ..+.+|+|+ +++.+|++.+++.|+++.
T Consensus 290 ~rs~~vvsf~~~~~~l~~~~~~~~-~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 290 ARSRMNVPFRLGKEELEKEFLKEA-EAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred HcCceEEEEEcCChhhhHHHHHHH-HHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 2224466676653 123333444 445998666543 236899996 559999999999999864
No 244
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.81 E-value=1.8e-17 Score=156.85 Aligned_cols=354 Identities=10% Similarity=0.088 Sum_probs=227.1
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC-CC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI-EE 126 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~-~~ 126 (433)
+..+....+.+++..|||..|.. . -..+|.+.+++.+++.+.. +..+.|.. .+-..++|+.|....+. ..
T Consensus 44 ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~--h~~~~~~~----~e~~v~~ae~L~~~~p~~~~ 117 (447)
T COG0160 44 RAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN--HTHTRDLY----YEPYVELAEKLTALAPGSGL 117 (447)
T ss_pred ecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh--cccCCccc----chhHHHHHHHHHHhCCcccC
Confidence 34444556677888999988543 3 3478999999999988754 12223322 24455555555543344 46
Q ss_pred CcEEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhh-hhHHHhCCcccc-cccccccceEEEeecCccC--Ccc--
Q 045431 127 GDIFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYV-DSSVIMGQTGEF-QKDAEKYGKIEYMRCTAEN--GFF-- 197 (433)
Q Consensus 127 ~~i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-- 197 (433)
..+++++++++|.++ + ......+..|+...-.|++-. ......|..... ..++.....+..+|....- .+.
T Consensus 118 ~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~ 197 (447)
T COG0160 118 KKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIG 197 (447)
T ss_pred CeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCc
Confidence 789999999999986 3 223344556777777776644 444444433221 1122222235555553211 000
Q ss_pred -cC--------CCC--------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 198 -PD--------LST--------VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 198 -~~--------~~~--------~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
.+ ++. ..++.++++ .| +.-.|.. .|.+.++++.++|++||+++|.||++.++...|....
T Consensus 198 ~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~-EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa 276 (447)
T COG0160 198 GEECGDDALEYIERALFDLEVGPEEVAAIII-EPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFA 276 (447)
T ss_pred hhhhhHHHHHHHHHHHHhhcCCCCceeEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchh
Confidence 00 110 124455554 55 7777754 4677889999999999999999999999988886555
Q ss_pred ccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 259 IFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
+-...-.+| +| ++||.+| .|+.+|.++.++++. + +.......+++.++++.+++.+.|+....
T Consensus 277 ~E~~gv~PD-iv---t~aK~ig-~G~Pl~avv~r~ei~--------~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~--- 339 (447)
T COG0160 277 FEHFGVEPD-IV---TLAKSLG-GGLPLSAVVGRAEIM--------D-WPPGGHGGTFGGNPVACAAALAVLDVIEE--- 339 (447)
T ss_pred hhhcCCCCC-EE---Eeccccc-CCCceeEEeccHHhc--------c-cCCcccCCCCCcCHHHHHHHHHHHHHHHH---
Confidence 544433344 33 7899998 799999999999985 3 44445555678899999999998873222
Q ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeecC--CCccEEEEECCC------CC---hHHHHHHHHHcCCeEecCCCCCCCC
Q 045431 339 HEVIGFYKENTDIIVETFNSL--GFKVYGG--KNAPYVWVQFPG------RS---SWDVFSEILEKTHVVTTPGSGFGPG 405 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~--g~~~~~~--~~g~~~~~~~~~------~~---~~~~~~~l~~~~gi~v~~g~~f~~~ 405 (433)
+++.++.++.-+++.+.|.++ ....++. --|+++-+.+.. .+ ...+..+++++ |+.+..+..+
T Consensus 340 e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~~--- 415 (447)
T COG0160 340 ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGPH--- 415 (447)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCCC---
Confidence 356666777777777777665 2323222 145777777641 11 23455565554 9888664332
Q ss_pred CCCeEEEe--eccChhHHHHHHHHHHHhhC
Q 045431 406 GEGFIRVS--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 406 ~~~~iRi~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
.+.+||. +..++++++++++.|.++++
T Consensus 416 -~nviRi~PPL~is~e~~d~~l~il~~al~ 444 (447)
T COG0160 416 -GNVLRILPPLTISDEELDEGLDILEEALK 444 (447)
T ss_pred -CcEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 4789999 57799999999999998763
No 245
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.81 E-value=1.1e-17 Score=154.45 Aligned_cols=205 Identities=19% Similarity=0.243 Sum_probs=157.7
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCC--CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYS--GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
.+...+.+..+... |.++.|++++.+.+.+....+... .|..-.+..+-|+.+|+++ ++++.+|++|+|+|++
T Consensus 40 ~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI----nAd~~dIiFts~ATEs 114 (428)
T KOG1549|consen 40 HGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI----NADPSDIVFTSGATES 114 (428)
T ss_pred CCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh----CCCCCcEEEeCCchHH
Confidence 34467777777653 789999999999887654323322 3333445788999999997 8999889999999999
Q ss_pred HHH-HHHh-cCCCC----EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCcc
Q 045431 139 ISR-LQIV-FGSNV----TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTD 207 (433)
Q Consensus 139 l~~-l~~l-~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 207 (433)
+++ +..+ ...+| +|++..-.|+.....++.+..+|. .+.++|++.++ ..+++. .++|+
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~---------~Vt~lpv~~~~--~~d~~~~~~~i~~~T~ 183 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGL---------EVTYLPVEDSG--LVDISKLREAIRSKTR 183 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCe---------EEEEeccCccc--cccHHHHHHhcCCCce
Confidence 998 5444 34566 899999999999888888776663 89999998433 233322 47999
Q ss_pred EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee
Q 045431 208 IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 208 ~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
++.+.+-+|-+|+++| +++|+++|+++++.+++|.+++-. .-+..+.++.. .++..|.+|++|++| +|
T Consensus 184 lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQavG---~i~vDV~eln~----D~~s~s~HK~ygp~~--iG 251 (428)
T KOG1549|consen 184 LVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAVG---KIPVDVQELNA----DFLSISAHKIYGPPG--IG 251 (428)
T ss_pred EEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhcC---CccccHHHcCc----hheeeecccccCCCc--ce
Confidence 9999899999999999 889999999999999999999831 11455555532 277788999999999 99
Q ss_pred eeeccc
Q 045431 288 WTVIPK 293 (433)
Q Consensus 288 ~l~~~~ 293 (433)
++++++
T Consensus 252 aLYvr~ 257 (428)
T KOG1549|consen 252 ALYVRR 257 (428)
T ss_pred EEEEcc
Confidence 999986
No 246
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.5e-17 Score=161.04 Aligned_cols=158 Identities=16% Similarity=0.239 Sum_probs=115.7
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhH----HHhCCccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSS----VIMGQTGEFQKD 178 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 178 (433)
..-...|.+.+|++. + .+..++++|+++++.+ +..++++||+|+++.+.|++....+ +..|
T Consensus 63 ~p~~~~Le~~lA~le----g--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~G-------- 128 (431)
T PRK08248 63 NPTTDVFEKRIAALE----G--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLG-------- 128 (431)
T ss_pred CchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCC--------
Confidence 345678888888885 4 3466778888888886 6788999999999999997654433 3445
Q ss_pred ccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 179 AEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
.+++.++..+...+...+ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.- .. ..+
T Consensus 129 ----v~v~~vd~~d~e~l~~ai--~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~--~~p 196 (431)
T PRK08248 129 ----ITVKFVDPSDPENFEAAI--TDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YL--LRP 196 (431)
T ss_pred ----EEEEEECCCCHHHHHHhc--CCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-cc--CCh
Confidence 367777654222222112 257899999999999999998 678899999999999999998721 11 122
Q ss_pred ccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 259 IFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
+ . .+..+++.|++|.+|.+|.++|++++.
T Consensus 197 l-~----~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 197 I-E----HGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred h-H----cCCCEEEEcCccccCCCCCceEEEEEe
Confidence 2 1 233488999999999899999987764
No 247
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.81 E-value=1.1e-17 Score=163.24 Aligned_cols=352 Identities=10% Similarity=0.059 Sum_probs=207.0
Q ss_pred HHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC--C
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--E 126 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~--~ 126 (433)
.++......+++..||+..|... -..+|.+.+++.+++..... ....+.+ .+.+..+|+.|....+.. .
T Consensus 28 ~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~--~~~~~~~----~~~~~~lae~L~~~~p~~~~~ 101 (442)
T TIGR00709 28 AQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP--LHTLDLT----TPLKDAFIEALLNIIPKRKMD 101 (442)
T ss_pred ccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC--ccccccC----cHHHHHHHHHHHHhCCCcCCC
Confidence 44444555677889999777532 24688999999999875211 1111112 345555566554322211 1
Q ss_pred Cc-EEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHhCC-cccccccccccceEEEeecCccCC------
Q 045431 127 GD-IFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYMRCTAENG------ 195 (433)
Q Consensus 127 ~~-i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~------ 195 (433)
.. +++++++++|... + ........+|+....+|++.......... ......++.....+..++......
T Consensus 102 ~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (442)
T TIGR00709 102 YKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIG 181 (442)
T ss_pred ccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCC
Confidence 34 4566788888875 3 12233446788899999887654443321 110000111111222222211000
Q ss_pred --------------cccCCCC-CCCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc
Q 045431 196 --------------FFPDLST-VARTDIIFFCSP-NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI 259 (433)
Q Consensus 196 --------------~~~~~~~-~~~~~~i~l~~p-~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 259 (433)
...+++. ..++.++++... .|+.....+++.+++|.++|++||+++|.||++.+|...+.....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~ 261 (442)
T TIGR00709 182 GEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAF 261 (442)
T ss_pred chhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHH
Confidence 0000111 135566665533 444445589999999999999999999999999988776654443
Q ss_pred cccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHH
Q 045431 260 FEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVH 339 (433)
Q Consensus 260 ~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 339 (433)
..+...+| ++ ++||.++ .|+++|+++++++. +.+......++.+.++++++++.+.|+.... +
T Consensus 262 ~~~gv~PD-iv---~~gK~l~-~G~Pigav~~~~~~---------~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~---~ 324 (442)
T TIGR00709 262 EHAGIEPD-FV---VMSKAVG-GGLPLAVLLIAPEF---------DAWQPAGHTGTFRGNQLAMVTGTEALNYWKD---D 324 (442)
T ss_pred HHcCCCCc-EE---EEccccc-CCcccEEEEEchHH---------hccCCCcCCCCCCcCHHHHHHHHHHHHHHHh---c
Confidence 33433344 33 3899998 69999999998773 1111122345667899999999998863222 3
Q ss_pred HHHHHHHHHHHHHHHHHhhc----CC-eeecCCCccEEEEECCCCC---------------hHHHHHHHHHcCCeEecCC
Q 045431 340 EVIGFYKENTDIIVETFNSL----GF-KVYGGKNAPYVWVQFPGRS---------------SWDVFSEILEKTHVVTTPG 399 (433)
Q Consensus 340 ~~~~~~~~~~~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~~---------------~~~~~~~l~~~~gi~v~~g 399 (433)
.+.+.++++.+++.+.|+++ ++ .-+. ..|.++.+.+.... ...+...+ .++||.+.+.
T Consensus 325 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~ 402 (442)
T TIGR00709 325 NLAQNAQERGERITSFLDDMIKEHPCIGNVR-GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGLLLETG 402 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeeeee-ccceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCeEEeec
Confidence 44556677777777777653 21 1122 24666666663110 12333344 4569999764
Q ss_pred CCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 400 SGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 400 ~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
.. ..+.+|+. +..+++++++++++|.+++
T Consensus 403 ~~----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l 433 (442)
T TIGR00709 403 GR----EGEVFRLLCPITIDQEECEEGISRFKQAV 433 (442)
T ss_pred CC----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 21 23678988 5679999999999998876
No 248
>PRK05939 hypothetical protein; Provisional
Probab=99.81 E-value=3.5e-17 Score=157.11 Aligned_cols=222 Identities=16% Similarity=0.159 Sum_probs=141.1
Q ss_pred CCCCCCCCH---HHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh---HHHhCCc
Q 045431 100 GYGAEQGEK---PLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS---SVIMGQT 172 (433)
Q Consensus 100 ~Y~~~~g~~---~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~ 172 (433)
.|+. .|.+ .|+++++++. +.. ..|++++| ++++.. +..++++||+|+++++.|++.... +...|
T Consensus 40 ~Y~r-~g~p~~~~lE~~la~le----g~~-~~v~~ssG-~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G-- 110 (397)
T PRK05939 40 TYAR-QGTPTTAALEAKITKME----GGV-GTVCFATG-MAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLG-- 110 (397)
T ss_pred CcCC-CCCHHHHHHHHHHHHHh----CCC-eEEEeCCH-HHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcC--
Confidence 4533 3566 8999999985 433 45666665 778876 678899999999999999875443 33445
Q ss_pred ccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccc-c
Q 045431 173 GEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALY-I 251 (433)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~-~ 251 (433)
.+++.++..+...+...+ .+++++|++++|+||||.+. ++++|+++|+++|+++|+|++|+.. .
T Consensus 111 ----------~~v~~v~~~d~e~l~~~l--~~~tklV~vesp~NptG~v~---dl~~I~~la~~~gi~livD~t~a~~~~ 175 (397)
T PRK05939 111 ----------VEVTMVDATDVQNVAAAI--RPNTRMVFVETIANPGTQVA---DLAGIGALCRERGLLYVVDNTMTSPWL 175 (397)
T ss_pred ----------CEEEEECCCCHHHHHHhC--CCCCeEEEEECCCCCCCCHH---hHHHHHHHHHHcCCEEEEECCcccccc
Confidence 367777653222222112 36899999999999999874 5999999999999999999998632 1
Q ss_pred cCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccccc-CCcchhH--------H--HHHHH----hhccC
Q 045431 252 SDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS-DGFPVAK--------D--FNRIV----CTCFN 316 (433)
Q Consensus 252 ~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~-~~~~~~~--------~--~~~~~----~~~~~ 316 (433)
+. +. . .+..+++.|+||.++..|.++|++++++..... ....... . +.... .....
T Consensus 176 ~~--~~---~----~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 246 (397)
T PRK05939 176 FR--PK---D----VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGA 246 (397)
T ss_pred cC--cc---c----cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCC
Confidence 11 11 1 134599999999999789999998875332100 0000000 0 11111 11111
Q ss_pred CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 317 GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 317 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
..++.. +..++ .+.+.+..+.++..++...+.+.|+++
T Consensus 247 ~~~p~~---a~l~~--rgl~tl~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 247 TLSSEA---AHRIA--IGAETLALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred CCCHHH---HHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 222322 22222 344555666777777899999999987
No 249
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=2e-17 Score=158.70 Aligned_cols=343 Identities=14% Similarity=0.097 Sum_probs=212.1
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCC---CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGY---SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
..|+|--+++ -.++.+.+++...+..... .++ .-|+-.....++.....+..++.++++-.+|..-||+++.+.
T Consensus 50 ~~l~LiasEN--~~s~~v~~a~~s~l~nkya-eg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~ 126 (493)
T PRK13580 50 SSLKLIASEN--YSSLAVQLAMGNLLTDKYA-EGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLV 126 (493)
T ss_pred cCceEecccc--cCCHHHHHHhcccccccCc-CCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHH
Confidence 3577766665 3567777777776654322 221 234334555556555555555567888889999999999998
Q ss_pred HHHHhcCC-------------------------------CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEee
Q 045431 141 RLQIVFGS-------------------------------NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMR 189 (433)
Q Consensus 141 ~l~~l~~~-------------------------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 189 (433)
.+.++++| ||+|+-.++...++.......+. ...+.....++
T Consensus 127 v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~-------~~~~~~~~~y~ 199 (493)
T PRK13580 127 AFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNI-------SGKMFHQRSYG 199 (493)
T ss_pred HHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccch-------hhheeeeEecc
Confidence 88888876 79999888777665322111111 11123566666
Q ss_pred cCccCCcccCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC
Q 045431 190 CTAENGFFPDLST-----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG 264 (433)
Q Consensus 190 ~~~~~~~~~~~~~-----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 264 (433)
++++.+ ..+++. .+.++.|+++..+|- |...+ +++|.++|+++|+++++|++|+.....+.... .....
T Consensus 200 vd~~~g-~iD~d~l~~~~~~~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~-~~~~~ 273 (493)
T PRK13580 200 VDPDTG-LLDYDEIAALAREFKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFAGLVAGKVFT-GDEDP 273 (493)
T ss_pred cCcccC-ccCHHHHHHHHhhcCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhhceeccccch-hhcCC
Confidence 664432 223222 356667777777665 44556 88888889999999999999986444322110 00000
Q ss_pred CCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHH
Q 045431 265 AKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGF 344 (433)
Q Consensus 265 ~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 344 (433)
..+..++++|++|++ .|.+.|+++++++++ +.+.+.......++.++..+++...+...........+++
T Consensus 274 ~~~~D~vtgT~hKaL--~GP~GG~I~~~~~l~--------~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~ 343 (493)
T PRK13580 274 VPHADIVTTTTHKTL--RGPRGGLVLAKKEYA--------DAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQ 343 (493)
T ss_pred CCCCcEEEeCChhhc--cCCCeEEEEecHHHH--------HHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHH
Confidence 122348899999998 334459999988774 4443222222222233333222223321111112567889
Q ss_pred HHHHHHHHHHHHhhcCCeeec-CCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCC-CCCC---CCeEEEeecc--
Q 045431 345 YKENTDIIVETFNSLGFKVYG-GKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGF-GPGG---EGFIRVSAFG-- 416 (433)
Q Consensus 345 ~~~~~~~l~~~l~~~g~~~~~-~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f-~~~~---~~~iRi~~~~-- 416 (433)
+.++.+.|.+.|.+.|+.+.. ...+..+++.+.+.. ....+...|.+.||.+.+-... .+.+ ...|||+...
T Consensus 344 l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~t 423 (493)
T PRK13580 344 VVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALT 423 (493)
T ss_pred HHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhh
Confidence 999999999999999998753 245678888887433 3335555666779999753322 1233 5679999532
Q ss_pred ----ChhHHHHHHHHHHHhh
Q 045431 417 ----HRGNVLEACKRFKHLY 432 (433)
Q Consensus 417 ----~~~~l~~~l~~l~~~l 432 (433)
+++|+++.++.|.+++
T Consensus 424 trg~teedi~~iad~l~~~l 443 (493)
T PRK13580 424 TLGMGSDEMDEVAELIVKVL 443 (493)
T ss_pred hcCCCHHHHHHHHHHHHHHH
Confidence 5899999999998765
No 250
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=4.1e-17 Score=156.66 Aligned_cols=304 Identities=14% Similarity=0.137 Sum_probs=183.6
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh-cCCCCEEEEe
Q 045431 78 PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV-FGSNVTMAVQ 155 (433)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l-~~~gd~Vl~~ 155 (433)
.+.-.+++.+.+.. +...+ .....+|++++|+++ +. +++++++|+++++.+ +..+ +++||+|+++
T Consensus 13 ~~~e~~~~~~~l~~-----~~~~~--g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~ 79 (379)
T PRK11658 13 GDEELAAVKEVLRS-----GWITT--GPKNQALEQAFCQLT----GN--QHAIAVSSATAGMHITLMALGIGPGDEVITP 79 (379)
T ss_pred CHHHHHHHHHHHHc-----CCccC--CHhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 34556777777652 22223 336799999999997 54 367888999999997 5666 7899999999
Q ss_pred CCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCC---CC--CCCccEEEEcCCCCccccCCCHHHHHHH
Q 045431 156 DPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---ST--VARTDIIFFCSPNNPTGAAATREQLTRL 230 (433)
Q Consensus 156 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i 230 (433)
+|+|..+...+...| .+++.++++.++ +..++ ++ .+++++|+ |+||+|...+ +++|
T Consensus 80 ~~~~~~~~~~~~~~G------------~~~v~vd~~~~~-~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i 140 (379)
T PRK11658 80 SLTWVSTLNMIVLLG------------ATPVMVDVDRDT-LMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAI 140 (379)
T ss_pred CCcHHHHHHHHHHcC------------CEEEEEecCCCc-CCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHH
Confidence 999999988888888 478888886543 32232 22 35788876 5667999876 7888
Q ss_pred HHHHHHcCCEEEEeccccc-cccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHH
Q 045431 231 VQFAKDNGSIIVYDSAYAL-YISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNR 309 (433)
Q Consensus 231 ~~~a~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~ 309 (433)
.++|++||++||+|++|+. ..+.+.+ +... + +.+.||++...+++.+.|+++.+++-+ .++++.
T Consensus 141 ~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~----g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~-------~~~~~~ 205 (379)
T PRK11658 141 RAIGERYGIPVIEDAAHAVGTYYKGRH--IGAR----G--TAIFSFHAIKNITCAEGGLVVTDDDEL-------ADRLRS 205 (379)
T ss_pred HHHHHHcCCeEEEECCCccCCeECCee--cCCC----C--CEEEeCCCCCcCcccCceEEEECCHHH-------HHHHHH
Confidence 9999999999999999984 3333221 1111 1 134566644444666788888764332 233333
Q ss_pred HHhhcc--------------------CCC--cHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCe-eecC
Q 045431 310 IVCTCF--------------------NGA--SNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFK-VYGG 366 (433)
Q Consensus 310 ~~~~~~--------------------~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~ 366 (433)
...... .+. ......|++...+ .+.+++..++-++..+.+.+.|+++++. +..+
T Consensus 206 ~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~ 282 (379)
T PRK11658 206 LKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQ---LAKLEALNARRREIAARYLQALADLPFQPLSLP 282 (379)
T ss_pred HHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCC
Confidence 221110 000 0111122232222 2345666677777777788888776432 2222
Q ss_pred CC----ccE-EEEECC----CCChHHHHHHHHHcCCeEecCCC----C---CCC---C---------CCCeEEEeec--c
Q 045431 367 KN----APY-VWVQFP----GRSSWDVFSEILEKTHVVTTPGS----G---FGP---G---------GEGFIRVSAF--G 416 (433)
Q Consensus 367 ~~----g~~-~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~----~---f~~---~---------~~~~iRi~~~--~ 416 (433)
.. .++ ..+.++ +.+..++.+.|. ++||.+.+.. . |.. . ....+.|-+. .
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l 361 (379)
T PRK11658 283 AWPHQHAWHLFIIRVDEERCGISRDALMEALK-ERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDM 361 (379)
T ss_pred CCCCceeEEEEEEEECCccccCCHHHHHHHHH-HCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCC
Confidence 11 222 223443 234556666654 5598765321 0 000 0 0123444432 4
Q ss_pred ChhHHHHHHHHHHHhh
Q 045431 417 HRGNVLEACKRFKHLY 432 (433)
Q Consensus 417 ~~~~l~~~l~~l~~~l 432 (433)
++++++..++.|++++
T Consensus 362 ~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 362 TDADVDRVITALQQIA 377 (379)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 7999999999998865
No 251
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.80 E-value=3.3e-17 Score=158.68 Aligned_cols=346 Identities=12% Similarity=0.078 Sum_probs=206.3
Q ss_pred HhcCCCCceEEecCC--CCCC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIG--DTTE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g--~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....+++..+|+..| ...+ ..+|.+.+++.+++.+.. ....|-. .+.+..+|+.|....+...+.+++++
T Consensus 69 l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~---~~~~~~~----~~~~~~lAe~L~~~~p~~~~~v~f~~ 141 (442)
T TIGR03372 69 LIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQP---LHSQELL----DPLRALLAKTLAALTPGKLKYSFFCN 141 (442)
T ss_pred EEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCC---CcccccC----CHHHHHHHHHHHHhCCCCcCEEEEeC
Confidence 344567788998776 3333 478899999999987642 2223322 33444455554432232336799999
Q ss_pred ChHHHHHHHHHh---c---CCCCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccCCcccCCCC----
Q 045431 134 GAKCDISRLQIV---F---GSNVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAENGFFPDLST---- 202 (433)
Q Consensus 134 G~~~al~~l~~l---~---~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 202 (433)
++++|.++...+ . ....+|+..+.+|++.............+ ..++.....+..+|.++.......++.
T Consensus 142 SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~ 221 (442)
T TIGR03372 142 SGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKT 221 (442)
T ss_pred CchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcC
Confidence 999998863222 2 12367888888888865444333211111 111111122344444321111111211
Q ss_pred CCCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc
Q 045431 203 VARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 203 ~~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
..++.+|+ ..| +.--|... +++.++++.++|++||+++|.||++..+...|.......+.-.+| ++ +++|.+|
T Consensus 222 ~~~vAavI-vEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD-iv---t~gK~lg 296 (442)
T TIGR03372 222 GDDVAAII-LEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPD-IL---CLAKALG 296 (442)
T ss_pred CCcEEEEE-EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCC-ee---eehhhhc
Confidence 12345544 456 55556655 688999999999999999999999987655554322222322344 22 5899998
Q ss_pred ccc-cceeeeeccccccccCCcchhHHHH--HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHh
Q 045431 281 FTG-VRLGWTVIPKELLFSDGFPVAKDFN--RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFN 357 (433)
Q Consensus 281 ~~G-~r~G~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 357 (433)
.| +.+|.+++++++. +.+. .....++.+.++++.+++.+.|+.... +++.++.++.-+++.+.|+
T Consensus 297 -~G~~Pigavv~~~~i~--------~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~---~~l~~~~~~~G~~l~~~L~ 364 (442)
T TIGR03372 297 -GGVMPIGATIATEAVF--------SVLFDNPFLHTTTFGGNPLACAAALATINELLE---KNLPAQAAIKGDFLLDGFQ 364 (442)
T ss_pred -CCcccceEEEecHHHH--------HhhhccCccccCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 88 6999999987774 3332 123345566788888888888763221 2334455566666666665
Q ss_pred hc----C--CeeecCCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHH
Q 045431 358 SL----G--FKVYGGKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRF 428 (433)
Q Consensus 358 ~~----g--~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l 428 (433)
++ . +.-+. ..|.++.+.+.... ...+...+++ +||.+.+... +.+.+||. +..+++++++++++|
T Consensus 365 ~l~~~~~~~i~~vR-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~----~~~~lr~~Ppl~~t~~~id~~~~~l 438 (442)
T TIGR03372 365 QLAAEYPDLIIEAR-GKGLLMAIEFRDNEIGYAFAKELFQ-QNILVAGTLN----NAKSIRIEPPLTITIEQCALVIKAA 438 (442)
T ss_pred HHHHhCCCceEEEe-cceEEEEEEeCChHHHHHHHHHHHH-CCcEEeecCC----CCCEEEEECCcccCHHHHHHHHHHH
Confidence 53 2 11122 25677778876322 3445555555 5999965311 23689988 467999999999999
Q ss_pred HHhh
Q 045431 429 KHLY 432 (433)
Q Consensus 429 ~~~l 432 (433)
.+++
T Consensus 439 ~~~~ 442 (442)
T TIGR03372 439 KDAL 442 (442)
T ss_pred HHhC
Confidence 8875
No 252
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.80 E-value=7.9e-19 Score=154.88 Aligned_cols=323 Identities=15% Similarity=0.174 Sum_probs=214.5
Q ss_pred cCCCCceEEecCCCCC--CC---ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc-cCC-CCCCcEEE
Q 045431 59 KYPDAEVISLGIGDTT--EP---IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK-DLG-IEEGDIFV 131 (433)
Q Consensus 59 ~~~~~~~i~l~~g~~~--~~---~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~-~~~-~~~~~i~~ 131 (433)
+.+++.-|||+.|.+. .. ..+.|.+|=.+.+.. .....|-|..|.+++.+.-++++.. +-. +....|+.
T Consensus 48 ~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~----~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~t 123 (427)
T KOG1411|consen 48 KDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASL----SLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVT 123 (427)
T ss_pred cCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhh----cccchhccccchHHHHHHHHHHhhcCCchhhhccceeE
Confidence 3445567999999872 22 234555554444432 4445899999999999999999753 222 23344443
Q ss_pred c--CChHHHHHH---HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCc
Q 045431 132 S--DGAKCDISR---LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVART 206 (433)
Q Consensus 132 ~--~G~~~al~~---l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (433)
+ -+++.++.+ +...+-++..|.+++|+|.+....+..+|... ..++|........|- .++..++...+.-
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~----~~yrYyd~~t~gld~-~g~ledl~~~p~g 198 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPV----KFYRYYDPKTRGLDF-KGMLEDLGEAPEG 198 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcce----eeeeeccccccccch-HHHHHHHhcCCCC
Confidence 3 233444433 45556678999999999999999999998421 111111222222221 2334444444444
Q ss_pred cEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC---cccccCCCCcceEEEeccccccccc
Q 045431 207 DIIFFC-SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR---SIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 207 ~~i~l~-~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~---~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
..|++. ..|||||+-.+.|.+++|.++.++.+.+-+.|.+|..|..++... .+.-+.....++++.-||.|.+|+-
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLY 278 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLY 278 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchh
Confidence 455554 449999999999999999999999999999999999987764322 2222222245688899999999999
Q ss_pred ccceee--eeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-----hHHHHHHHHHHHHHHHHHHH
Q 045431 283 GVRLGW--TVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-----KAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 283 G~r~G~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~l~~~ 355 (433)
|-|+|. +++.+.-. ..++...+..+.......++.-....+...|.+... ..++.+..++...|+.+.+.
T Consensus 279 gERvGa~svvc~~ad~---A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~ 355 (427)
T KOG1411|consen 279 GERVGALSVVCKDADE---AKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDA 355 (427)
T ss_pred hhccceeEEEecCHHH---HHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHH
Confidence 999996 35554442 223334455555555666666677777778876544 33677777888889999999
Q ss_pred HhhcC----CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEec
Q 045431 356 FNSLG----FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTT 397 (433)
Q Consensus 356 l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 397 (433)
|+..| |.....+-|+|.+-.+. .+..+.+.+++.|.+.
T Consensus 356 L~~~gs~~~W~hI~~QIGMF~fTgl~----peQv~~l~ke~~iYmT 397 (427)
T KOG1411|consen 356 LEKEGSPGNWSHITKQIGMFCFTGLN----PEQVDWLTKEYHIYLT 397 (427)
T ss_pred hhcCCCCccHHHHHHhhheeeecCCC----HHHHHHHHhhheeeec
Confidence 98764 44455567898886664 3677888889899885
No 253
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.80 E-value=2e-18 Score=153.96 Aligned_cols=288 Identities=18% Similarity=0.235 Sum_probs=177.0
Q ss_pred CCCHHHHHHHHHHHhc-c-CCCCCCcEEEcCChHHHHHH-HHHhcCC----C--CEEEEeCCCChhhhhhHHHhCCcccc
Q 045431 105 QGEKPLRAAIASTFYK-D-LGIEEGDIFVSDGAKCDISR-LQIVFGS----N--VTMAVQDPSYPAYVDSSVIMGQTGEF 175 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~-~-~~~~~~~i~~~~G~~~al~~-l~~l~~~----g--d~Vl~~~p~~~~~~~~~~~~g~~~~~ 175 (433)
--.++|.+.|.+.-.- | -..+...|++++|+++.+++ +.+|... + -.|+...|.|+.|......+...
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~--- 119 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSR--- 119 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BT---
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhcccc---
Confidence 3457888888765332 3 22356789999999999997 5555322 1 47899999999998765444321
Q ss_pred cccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
.....-|. ..+. + .....+-.=++++||||.|.. ++.++ +.-+..+|.|-+|.+=.
T Consensus 120 ---------~y~w~Gda-~~~~-~-~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPh---- 175 (363)
T PF04864_consen 120 ---------LYKWAGDA-SNFK-N-SDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPH---- 175 (363)
T ss_dssp ---------TEEEEEEC-CCGT-T--S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STT----
T ss_pred ---------CccccccH-Hhhc-c-CCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccc----
Confidence 11111111 1121 0 011233334667999999985 34454 34456679999998522
Q ss_pred CCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF 335 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 335 (433)
.+++.+. .|..|.+.|+||.-|-+|.|+||.++.++.+ .+++..+....+.++|.=+|.-++.+|+....
T Consensus 176 yTpI~~~---aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~V-------a~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~ 245 (363)
T PF04864_consen 176 YTPITAP---ADHDIMLFTLSKLTGHAGSRFGWALVKDEEV-------AKKMTKYMELNTIGVSRDSQLRALKILKVVLD 245 (363)
T ss_dssp TS---S----B--SEEEEEHHHHCS-GGG-EEEEEES-HHH-------HHHHHHHHHHHCSS--HHHHHHHHHHHHHHHH
T ss_pred ccccCCC---CCCceEEEEEecccCccccccceeeecCHHH-------HHHHHHHHHHhcccCcHHHHHHHHHHHHHHHh
Confidence 2333332 2345889999999999999999999988876 67888888889999999999888887762111
Q ss_pred ---------hHHHHHHHHHHHHHHHHHHHHhhcC-Ceee--cC-----------CCccEEEEECCCCChHHHHHHHHHcC
Q 045431 336 ---------KAVHEVIGFYKENTDIIVETFNSLG-FKVY--GG-----------KNAPYVWVQFPGRSSWDVFSEILEKT 392 (433)
Q Consensus 336 ---------~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~--~~-----------~~g~~~~~~~~~~~~~~~~~~l~~~~ 392 (433)
+..+--++.+++|.+.|.+.+..-+ +.+. .| ....|.|+++...... -....++++
T Consensus 246 ~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~-DC~~~l~~~ 324 (363)
T PF04864_consen 246 GYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDE-DCYAVLREA 324 (363)
T ss_dssp HCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGS-SHHHHHHCT
T ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccc-cHHHHHHhC
Confidence 2345567788899999999987652 2221 11 2456899999854332 334556788
Q ss_pred CeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 393 HVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 393 gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
||..+.|..|+. +..++|||+-.++++++.++++|..+
T Consensus 325 ~I~tr~G~~fga-~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 325 KIITRSGVLFGA-DSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp TEEEEEGGGGTS--TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred CcccCCCCccCC-CCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 999999999985 56899999989999999999999865
No 254
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=4.7e-17 Score=156.57 Aligned_cols=337 Identities=12% Similarity=0.038 Sum_probs=201.5
Q ss_pred HhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....+++..|||..|.. .+ ..+|.+.+++.+++.+... .+ .....++...+++++.+.. ..+.+++++
T Consensus 30 ~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~-----~~--~~~~~~~~~~la~~l~~~~--~~~~v~f~~ 100 (395)
T PRK03715 30 LYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLIN-----PS--PAFYNEPMAKLAGLLTQHS--CFDKVFFAN 100 (395)
T ss_pred EEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccc-----cc--ccccCHHHHHHHHHHhhcc--CCCEEEEeC
Confidence 33456778999986532 12 2478999999998875321 11 1133567778888885422 246899999
Q ss_pred ChHHHHHHHHHhc-------CCC-CEEEEeCCCChhhhh-hHHHhCCcccccccccccceEEEeecCccCCcccCCCC--
Q 045431 134 GAKCDISRLQIVF-------GSN-VTMAVQDPSYPAYVD-SSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-- 202 (433)
Q Consensus 134 G~~~al~~l~~l~-------~~g-d~Vl~~~p~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (433)
++++|......++ ++| .+|+..+.+|++... .+...+.......+......+...+.++ ..+++.
T Consensus 101 SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d----~~~l~~~l 176 (395)
T PRK03715 101 SGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELND----IASVEKLI 176 (395)
T ss_pred CcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCch----HHHHHHHc
Confidence 9999988632222 123 578888888877543 3333332111000100000111111111 011111
Q ss_pred CCCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc
Q 045431 203 VARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 203 ~~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
.+++.+|++ .| ++..|... +++.+++|.++|++||+++|.||++..+...|.......+.-.+| +.+++|.+|
T Consensus 177 ~~~~aavi~-Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD----i~t~gK~lg 251 (395)
T PRK03715 177 TDKTVAVML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD----IMTLGKGIG 251 (395)
T ss_pred CCCceEEEE-eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc----eeeehhhhh
Confidence 135555554 55 55566654 689999999999999999999999998655554322222222244 357899998
Q ss_pred ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL- 359 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 359 (433)
.|+.+|.+++++++. .+......++.+.++++.+++.+.|+.... +++.++++++.+++.+.|+++
T Consensus 252 -~G~p~~av~~~~~i~---------~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~ 318 (395)
T PRK03715 252 -GGVPLAALLAKAEVA---------VFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELS 318 (395)
T ss_pred -CCcceEEEEEccccc---------cccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHh
Confidence 789999999988873 111112234445678888878777763211 345666667777777777653
Q ss_pred ---CCeeecCCCccEEEEECCCCChHHHHHHHHHcC---CeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHh
Q 045431 360 ---GFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKT---HVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 360 ---g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~---gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~ 431 (433)
++..+. ..|.++-+.+.......+. ..+.+. ||.+.+. ....+||+ +..+++++++++++|+++
T Consensus 319 ~~~~i~~vr-G~Glm~~i~l~~~~~~~~~-~~~~~~~~~Gi~~~~~------~~~~lR~~p~l~~t~~ei~~~~~~l~~~ 390 (395)
T PRK03715 319 EERGLEGER-GEGLLRALLLGKDIGPQIV-EKARDMQPDGLLLNAP------RPNLLRFMPALNVTTEEIDQMIAMLRSV 390 (395)
T ss_pred hcCCcCeEE-cceeEEEEEecCchHHHHH-HHHHhccCCCEEEeec------CCCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 443333 2467777777532222222 223344 9998642 13579999 456999999999999987
Q ss_pred h
Q 045431 432 Y 432 (433)
Q Consensus 432 l 432 (433)
+
T Consensus 391 l 391 (395)
T PRK03715 391 L 391 (395)
T ss_pred H
Confidence 6
No 255
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=4.6e-17 Score=159.79 Aligned_cols=343 Identities=12% Similarity=0.079 Sum_probs=198.1
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcc-cCCCCCCCCC-CCCCHHH----HHHHHHHHhccCCCCCCcEEEc---CC
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALS-TQEGYSGYGA-EQGEKPL----RAAIASTFYKDLGIEEGDIFVS---DG 134 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~Y~~-~~g~~~l----r~~la~~l~~~~~~~~~~i~~~---~G 134 (433)
..|+|-.+++ ..++.+++++...+.... .......|.. ......+ |+.+++++ +++++++.++ +|
T Consensus 35 ~~l~l~~sen--~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~a~~~~~~~~~~~~s 108 (452)
T PTZ00094 35 EGLELIASEN--FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----GLDPEEWGVNVQPYS 108 (452)
T ss_pred cCeeEecccc--cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----CCCcccceeecCCCc
Confidence 4688888876 367888888888875332 0111122211 1112222 33455554 7888887666 67
Q ss_pred hHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC---CCCccEE
Q 045431 135 AKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST---VARTDII 209 (433)
Q Consensus 135 ~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i 209 (433)
++++..+ +.+++++||+|++....|.++...+.......+ .......++..++++.++..+.+ +++ ..+++++
T Consensus 109 gt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~--~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lv 186 (452)
T PTZ00094 109 GSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKV--SATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLI 186 (452)
T ss_pred hHHHHHHHHHHhcCCCCEEEecccccCCccccccccccccc--ccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEE
Confidence 7777776 788899999999988888776543321110000 00000123444555543332222 221 1356766
Q ss_pred EEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcccccCCCCcceEEEeccccccccccccee
Q 045431 210 FFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN--PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG 287 (433)
Q Consensus 210 ~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G 287 (433)
++. ++.+|+..+ +++|.++|+++|+++++|++++....... +.++ + +..++++|++|+++ |.+.|
T Consensus 187 i~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~---~---~~D~l~~S~hK~l~--GP~Gg 253 (452)
T PTZ00094 187 IAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPF---P---YADVVTTTTHKSLR--GPRSG 253 (452)
T ss_pred EEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCC---C---CCcEEEcCCccCCC--CCCce
Confidence 653 334899888 67777889999999999999985333221 1121 1 23488999999883 33348
Q ss_pred eeeccccccccCCcchhHHHHHHHhhcc-CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecC
Q 045431 288 WTVIPKELLFSDGFPVAKDFNRIVCTCF-NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGG 366 (433)
Q Consensus 288 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 366 (433)
++++++..... +...+........ .+++....++..++++.......+..++++.++++++.+.|.+.|+.+..+
T Consensus 254 ~l~~~~~~~~~----l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~ 329 (452)
T PTZ00094 254 LIFYRKKVKPD----IENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTG 329 (452)
T ss_pred EEEEecccchH----HHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecC
Confidence 88887665310 0111111111111 123333333333344322112346778899999999999998888887643
Q ss_pred C-CccEEEEECC--CCChHHHHHHHHHcCCeEe-cCCCCCCC--CCCCeEEEee--ccC----hhHHHHHHHHHHHhh
Q 045431 367 K-NAPYVWVQFP--GRSSWDVFSEILEKTHVVT-TPGSGFGP--GGEGFIRVSA--FGH----RGNVLEACKRFKHLY 432 (433)
Q Consensus 367 ~-~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v-~~g~~f~~--~~~~~iRi~~--~~~----~~~l~~~l~~l~~~l 432 (433)
. .....++.+. +.+... +..+++++||.+ .++..+.+ ..++.+|+++ +++ ++|++++++.|.+++
T Consensus 330 ~~~~~~~~v~~~~~~~~~~~-~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 330 GTDNHLVLVDLRPFGITGSK-MEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred CCCCceEeecCCcCCCCHHH-HHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 2 1234555554 334444 445556679999 55554432 2357899994 444 899999999998875
No 256
>PRK06541 hypothetical protein; Provisional
Probab=99.80 E-value=3e-17 Score=160.46 Aligned_cols=354 Identities=12% Similarity=0.092 Sum_probs=210.2
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+..+......+++..||+..|.- . -..+|.+.+++.+++.+... .....| ..+.+..+|+.+.+..+.+.+
T Consensus 40 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~-~~~~~~-----~~~~~~~la~~l~~~~p~~~~ 113 (460)
T PRK06541 40 RGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAF-FPLWSY-----AHPPAIELAERLAALAPGDLN 113 (460)
T ss_pred eCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcC-cccccc-----CCHHHHHHHHHHHHhCCCCcC
Confidence 34444455567788999977632 2 23679999999999976421 111122 123344455555432233346
Q ss_pred cEEEcCChHHHHHH-HH-H-hc---C---CCCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCcc----
Q 045431 128 DIFVSDGAKCDISR-LQ-I-VF---G---SNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAE---- 193 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l~-~-l~---~---~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~---- 193 (433)
.+++++++++|... +. + .. . ...+|+..+-+|++........ +.......++.....+..+|....
T Consensus 114 ~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 193 (460)
T PRK06541 114 RVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAP 193 (460)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCcccccc
Confidence 89999999999885 31 1 11 1 2367888888888765433322 211100001111112232332110
Q ss_pred ---CCc-------ccCCCC-----CCCccEEEEcCC-CCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 194 ---NGF-------FPDLST-----VARTDIIFFCSP-NNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 194 ---~~~-------~~~~~~-----~~~~~~i~l~~p-~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
++. ...+++ .++..+.+++.| +++.|.+.+ .+.+++|.++|++||+++|.||++..|...+..
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~ 273 (460)
T PRK06541 194 ELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEM 273 (460)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchh
Confidence 000 001111 123445666778 899998765 889999999999999999999999777444432
Q ss_pred CcccccCCCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHHH----HHhhccCCCcHHHHHHHHHhcC
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFNR----IVCTCFNGASNISQAGGLACLS 331 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~ 331 (433)
.....++-.+| ++ +|+|.++ .|+ ++|+++++++++ +.+.. +....+.+.++++.+++.+.++
T Consensus 274 ~a~~~~gv~PD-iv---t~gK~l~-~G~~pigav~~~~~i~--------~~~~~~~~~~~~~~T~~gnp~~~aaala~l~ 340 (460)
T PRK06541 274 FGCERFGYVPD-II---TCAKGIT-SGYSPLGAMIASDRLF--------EPFLDGPTMFLHGYTFGGHPVSAAVALANLD 340 (460)
T ss_pred hhhhhcCCCCC-EE---Eeccccc-CCccceeEEEEcHHHH--------HHhhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 22222222234 23 5899998 887 999999998885 33321 1223455577888888887776
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHhhc-CCee---ecCCCccEEEEECCCC-------Ch--------HHHHHHHHHcC
Q 045431 332 PEGFKAVHEVIGFYKENTDIIVETFNSL-GFKV---YGGKNAPYVWVQFPGR-------SS--------WDVFSEILEKT 392 (433)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~---~~~~~g~~~~~~~~~~-------~~--------~~~~~~l~~~~ 392 (433)
.... +.+.++++++.+++.+.|+++ ...+ +.. .|.++-+.+... .. ..+...++ ++
T Consensus 341 ~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 415 (460)
T PRK06541 341 IFER---EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRG-DGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EA 415 (460)
T ss_pred HHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe-cceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hC
Confidence 3211 345677788888888888775 2222 222 455666665310 00 12334444 56
Q ss_pred CeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 393 HVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 393 gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
||.+.+. +.+.+.+||+. ..+++++++++++|.+++
T Consensus 416 Gi~~~~~----~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l 453 (460)
T PRK06541 416 GLYCRAD----DRGDPVVQLAPPLISGQEEFDEIEQILRSVL 453 (460)
T ss_pred CeEEEec----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 9999763 12346899994 579999999999998876
No 257
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=5.8e-17 Score=154.98 Aligned_cols=221 Identities=19% Similarity=0.164 Sum_probs=137.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHh-CCccccc
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQ 176 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~ 176 (433)
+..|+. +-...|++.++++. +. +..+++++| +.++.++..+++|||+|++++|.|++....+... ...+
T Consensus 44 y~r~~~-p~~~~Le~~la~l~----g~-~~al~~~SG-~~Al~~~l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g--- 113 (380)
T PRK06176 44 YSRSGN-PTRFALEELIADLE----GG-VKGFAFASG-LAGIHAVFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNG--- 113 (380)
T ss_pred ccCCCC-hhHHHHHHHHHHHh----CC-CCEEEECCH-HHHHHHHHHHcCCCCEEEEcCCChhHHHHHHHHHHHhcC---
Confidence 334432 34788899999886 53 345666666 5577776678899999999999998765444321 1111
Q ss_pred ccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 177 KDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.++..++..+...+...+ .+++++|++.+|+||||.+++ +++|.++|+++|+++|+|++|+..... .+
T Consensus 114 ------i~v~~vd~~d~e~l~~ai--~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~p 181 (380)
T PRK06176 114 ------LSCTIIDTSDLSQIKKAI--KPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-NP 181 (380)
T ss_pred ------eEEEEcCCCCHHHHHHhc--CcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-Cc
Confidence 356655543211111111 357899999999999999988 778889999999999999999853222 12
Q ss_pred CcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF 335 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 335 (433)
+ .. +..+++.|++|.++.+| .-.|+++++++.+ .+.+...+.......++....... .+.
T Consensus 182 --~-~~----gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~~~~~~~~~l~~-----~gl 242 (380)
T PRK06176 182 --L-LL----GADIVVHSGTKYLGGHSDVVAGLVTTNNEAL-------AQEIAFFQNAIGGVLGPQDSWLLQ-----RGI 242 (380)
T ss_pred --c-cc----CCCEEEecCceeccCCccceeeEEEecHHHH-------HHHHHHHHHHhcCCCCHHHHHHHH-----hcc
Confidence 2 12 12388999999996444 3356777654333 244443333322223333322222 222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 336 KAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 336 ~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+..+.++..++...+.+.|+++
T Consensus 243 ~tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 243 KTLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 334555556667777788888775
No 258
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.79 E-value=2.5e-17 Score=160.70 Aligned_cols=348 Identities=13% Similarity=0.103 Sum_probs=208.8
Q ss_pred HHHhcCCCCceEEecCCC--CCC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEE
Q 045431 55 AHMLKYPDAEVISLGIGD--TTE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFV 131 (433)
Q Consensus 55 ~~~~~~~~~~~i~l~~g~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~ 131 (433)
......+++..+|+..|. ..+ ..+|.+.+++.+++.+.. ....|.. .+.+..+|+.|....+...+.+++
T Consensus 74 ~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~---~~~~~~~----~~~~~~lae~L~~~~p~~~~~v~f 146 (459)
T PRK11522 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQP---LHSQELL----DPLRAMLAKTLAALTPGKLKYSFF 146 (459)
T ss_pred EEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCc---ccccccC----CHHHHHHHHHHHHhCCCCCCEEEE
Confidence 334455677889987763 322 468999999999997642 1222222 344455555554322333468999
Q ss_pred cCChHHHHHHHHHh---cC--C-CCEEEEeCCCChhhhhhHHHhCCccccc-ccccccceEEEeecCccCCcccCCCC--
Q 045431 132 SDGAKCDISRLQIV---FG--S-NVTMAVQDPSYPAYVDSSVIMGQTGEFQ-KDAEKYGKIEYMRCTAENGFFPDLST-- 202 (433)
Q Consensus 132 ~~G~~~al~~l~~l---~~--~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (433)
++++++|.+....+ .. + ...|+..+.+|++.............+. .++.....+..+|.++...+...++.
T Consensus 147 ~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 226 (459)
T PRK11522 147 CNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECK 226 (459)
T ss_pred eCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhh
Confidence 99999998863222 22 2 2468888888888654433332211111 11111122333433221111111111
Q ss_pred --CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccc
Q 045431 203 --VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKY 278 (433)
Q Consensus 203 --~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~ 278 (433)
..++.+ ++..| +.-.|.. .+.+.++++.++|++||+++|.||++..+...|.......+.-.+| ++ +++|.
T Consensus 227 ~~~~~iAa-vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD-iv---t~gK~ 301 (459)
T PRK11522 227 KTGDDVAA-VILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD-IL---CLAKA 301 (459)
T ss_pred ccCCcEEE-EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC-EE---Eechh
Confidence 123444 44555 5556764 4677899999999999999999999987655444322222322344 22 78999
Q ss_pred ccccc-cceeeeeccccccccCCcchhHHHH--HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHH
Q 045431 279 AGFTG-VRLGWTVIPKELLFSDGFPVAKDFN--RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 279 ~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (433)
+| .| +.+|.+++++++. +.+. .....++.+.++++.+++.+.|+.... +.+.++.+++.+++.+.
T Consensus 302 lg-gG~~Pigav~~~~~i~--------~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l~~~ 369 (459)
T PRK11522 302 LG-GGVMPIGATIATEEVF--------SVLFDNPFLHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYLLDG 369 (459)
T ss_pred hh-CCCccceeEEEcHHHH--------HHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHHHHH
Confidence 98 78 6999999988774 3332 123445566688888888888763322 34566777777777777
Q ss_pred Hhhc--CCe-e---ecCCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHH
Q 045431 356 FNSL--GFK-V---YGGKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACK 426 (433)
Q Consensus 356 l~~~--g~~-~---~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~ 426 (433)
|+++ ... + +. ..|.++.+.+.... ...+...+++ +||.+.+.. .+.+.+|+. +..++++++++++
T Consensus 370 L~~l~~~~~~~i~~Vr-G~Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~----~~~~~lr~~Ppl~~t~~~id~~l~ 443 (459)
T PRK11522 370 FRQLAREYPDLVQEAR-GKGMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTL----NNAKTIRIEPPLTLTIEQCEQVLK 443 (459)
T ss_pred HHHHHHhCCCceeeEE-eceeEEEEEecCchHHHHHHHHHHH-CCeEEEecC----CCCCEEEEECCccCCHHHHHHHHH
Confidence 7664 222 1 22 24677777776422 3345555554 599997532 234689998 4669999999999
Q ss_pred HHHHhh
Q 045431 427 RFKHLY 432 (433)
Q Consensus 427 ~l~~~l 432 (433)
+|.+++
T Consensus 444 ~l~~~l 449 (459)
T PRK11522 444 AARKAL 449 (459)
T ss_pred HHHHHH
Confidence 998875
No 259
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=6.6e-17 Score=156.49 Aligned_cols=160 Identities=18% Similarity=0.193 Sum_probs=112.2
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHh-CCccccccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKY 182 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~ 182 (433)
+...+|++.+|++. +. +..++++++++++.+ +..++++||+|+++.+.|.+....+... ...+
T Consensus 58 pt~~~Le~~lA~l~----g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~g--------- 122 (425)
T PRK06084 58 PTNDVLEQRVAALE----GG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIG--------- 122 (425)
T ss_pred chHHHHHHHHHHHh----CC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccce---------
Confidence 45678999999886 42 345566777788887 6788999999999999998655544322 1111
Q ss_pred ceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc
Q 045431 183 GKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
.++..++..+...+...+ .+++++|++++|+||||.+++ +++|.++|+++|++||+|++|+..... .++ ..
T Consensus 123 i~v~~~d~~d~e~le~ai--~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~---~p~-~~ 193 (425)
T PRK06084 123 IETRFAAHDDIAALEALI--DERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC---RPF-EH 193 (425)
T ss_pred eEEEEECCCCHHHHHHHh--ccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---Chh-hc
Confidence 244444432111111111 257899999999999999998 788999999999999999999842211 111 11
Q ss_pred CCCCcceEEEecccccccccccceeeeecc
Q 045431 263 PGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
+..+++.|++|.++.+|.++|.+++.
T Consensus 194 ----gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 194 ----GADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred ----CCCEEEECchhcccccccceeEEEEe
Confidence 12389999999998888999877764
No 260
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=5.6e-17 Score=146.07 Aligned_cols=317 Identities=15% Similarity=0.129 Sum_probs=192.3
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQI 144 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~ 144 (433)
++|.+... ..+.+++++++.++-. .....|+.+.-...+.+.+++.+ +. +.++++.++|++..+ |..
T Consensus 2 ~~f~SDn~-~g~~~~m~eam~~a~~-----~~~~~YG~D~~~~~~e~~~ae~~----g~--~a~~Fv~sGT~aN~lal~~ 69 (342)
T COG2008 2 IDFRSDNV-AGPTPEMREALAAANA-----VGDDVYGEDPTTNALEQRIAELF----GK--EAALFVPSGTQANQLALAA 69 (342)
T ss_pred CccccCcc-CCCCHHHHHHHHhccc-----cCCCCCCCCHHHHHHHHHHHHHh----CC--ceEEEecCccHHHHHHHHH
Confidence 34444332 2456788888888653 33446765555555555555544 65 677777777777776 888
Q ss_pred hcCCCCEEEEeCCCChhhhh--hHHHhCCcccccccccccceEEEeecCc--cCCcccC-CCC--------CCCccEEEE
Q 045431 145 VFGSNVTMAVQDPSYPAYVD--SSVIMGQTGEFQKDAEKYGKIEYMRCTA--ENGFFPD-LST--------VARTDIIFF 211 (433)
Q Consensus 145 l~~~gd~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~--------~~~~~~i~l 211 (433)
.++||+.|++..-.|-...+ ....++ ++..++..+ ++-+.++ ++. ...+.++++
T Consensus 70 ~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-------------~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~ 136 (342)
T COG2008 70 HCQPGESVICHETAHIYTDECGAPEFFG-------------GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVL 136 (342)
T ss_pred hcCCCCeEEEeccccceecccCcHHHHc-------------CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEE
Confidence 99999999998887754332 223333 223333332 2222221 111 134455555
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc--cccCCCCCcccccCCCCcceEEEecccccccccccceeee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL--YISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~--~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
.|++|--|+++|.+++++|.++|++||++|..|.+--. ....+ .+.+++...-| ++.-++||..+.|+ |.|
T Consensus 137 e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D--~v~~~~tK~g~~~~---gAi 209 (342)
T COG2008 137 ENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVD--SVSFCLTKGGGAPV---GAI 209 (342)
T ss_pred eeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCC--EEEEecccCCccee---eeE
Confidence 56666789999999999999999999999999987442 22222 44555543233 44557899887555 654
Q ss_pred -eccccccccCCcchhHHHHHHH--hhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeec
Q 045431 290 -VIPKELLFSDGFPVAKDFNRIV--CTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYG 365 (433)
Q Consensus 290 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 365 (433)
+++.+++ +++..++ ......-+.+..++...+|++..+ .....+-.+..+.|.+.|+.. |+++..
T Consensus 210 v~gn~~~~--------~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~---~~~~~Han~mA~~La~~~~~~~G~~~~~ 278 (342)
T COG2008 210 VFGNRDFA--------KRARRWRKRAGGLMRKARFLAAQGLYALEDDVW---RLAADHANAMAARLAEGLEAKPGVKLAF 278 (342)
T ss_pred EEcCHHHH--------HHHHHHHHHhcccHhhhhHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhhhcCCceecc
Confidence 4555554 4443333 222222344444556667765433 222333444588899999965 999988
Q ss_pred CCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 366 GKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 366 ~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|..++.++++++... ........+...|+.+.+++ ..+|+. +..+++++++++..++.++
T Consensus 279 ~~~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 279 PVETNMVFVRLPESAIEALRLAGALFYRGVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred CCcccEEEEECChHHHHHHHhhchhheeeeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 889999999998411 11111112223355543321 368888 4668999999999998765
No 261
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=1.9e-16 Score=150.58 Aligned_cols=219 Identities=16% Similarity=0.180 Sum_probs=138.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhH----HHhCCcc
Q 045431 99 SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSS----VIMGQTG 173 (433)
Q Consensus 99 ~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~ 173 (433)
..|+ -.| .+.++++++.+... ...++.|++++ +++|+.+ +..++++||+|++++|.|+++...+ +..|
T Consensus 56 y~Ys-R~g-nPt~~~Le~~la~l-e~~~~~v~~sS-G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~G--- 128 (395)
T PRK05967 56 YTYG-TRG-TPTTDALCKAIDAL-EGSAGTILVPS-GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLG--- 128 (395)
T ss_pred CccC-CCC-ChHHHHHHHHHHHH-hCCCCEEEECc-HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcC---
Confidence 3464 223 34444444444321 22445666666 6788886 6889999999999999999977544 4445
Q ss_pred cccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 174 EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
.++..++.+....+...+ .+++++|++++|+||++. ..++++|+++|+++|+++|+|++|+...+.
T Consensus 129 ---------i~v~~vd~~~~e~l~~al--~~~TklV~lesPsNP~l~---v~dl~~I~~la~~~g~~vvVD~t~a~p~~~ 194 (395)
T PRK05967 129 ---------VEVEYYDPEIGAGIAKLM--RPNTKVVHTEAPGSNTFE---MQDIPAIAEAAHRHGAIVMMDNTWATPLYF 194 (395)
T ss_pred ---------eEEEEeCCCCHHHHHHhc--CcCceEEEEECCCCCCCc---HHHHHHHHHHHHHhCCEEEEECCccCceec
Confidence 366666543211111111 367999999999999765 666999999999999999999999853221
Q ss_pred CCCCcccccCCCCcceEEEecccccccc-cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCc
Q 045431 254 DNPRSIFEIPGAKEVAIETSSFSKYAGF-TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP 332 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~vi~i~S~sK~~~~-~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 332 (433)
.++ .+ +-.|++.|.+|.++- ++.-.|+++.+++.. +.+...........++.. +..++
T Consensus 195 ---~pl-~~----GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~--------~~l~~~~~~~G~~~~p~d---a~l~~-- 253 (395)
T PRK05967 195 ---RPL-DF----GVDISIHAATKYPSGHSDILLGTVSANEKCW--------PQLLEAHGTLGLCAGPDD---TYQIL-- 253 (395)
T ss_pred ---Chh-Hc----CCCEEEEecccccCCCCCeeEEEEEcCHHHH--------HHHHHHHHHcCCCCCHHH---HHHHH--
Confidence 111 12 223899999998751 235578777665542 334333332223334443 22232
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 333 EGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.+.+.+.-+.++..++...+.+.|+++
T Consensus 254 rgl~Tl~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 254 RGLRTMGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 344556777777888888899999887
No 262
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.77 E-value=5.2e-17 Score=155.93 Aligned_cols=323 Identities=12% Similarity=0.063 Sum_probs=192.8
Q ss_pred EEecCCCCCCCChHH-HHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-CCcEEEcC-ChHHHHHH-
Q 045431 66 ISLGIGDTTEPIPEV-ITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-EGDIFVSD-GAKCDISR- 141 (433)
Q Consensus 66 i~l~~g~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~-G~~~al~~- 141 (433)
+.|..|. ...++. +++++.+..... ......-..-..+.|+.+++++ +++ +++|++++ |++.++++
T Consensus 14 ~~f~~Gp--~~~~~~~v~~a~~~~~~~~----~hr~~~f~~~~~~~r~~l~~l~----~~~~~~~v~~~~gs~T~~~~~~ 83 (378)
T PRK03080 14 PRFSSGP--CKKRPGWQLEALADALLGR----SHRQKPVKALLKRVIEGTRELL----SLPEGYEVGIVPGSDTGAWEMA 83 (378)
T ss_pred CCcCCCC--cCCChHHHHHHHHhhhccc----CcCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEECCchHHHHHHH
Confidence 3344443 345556 888888654310 0101101234456666666665 764 45798875 88999997
Q ss_pred HHHhcCC-CCEEEEeCCCChhhhh--hHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCcc
Q 045431 142 LQIVFGS-NVTMAVQDPSYPAYVD--SSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPT 218 (433)
Q Consensus 142 l~~l~~~-gd~Vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPt 218 (433)
+..++++ ++.|+. .-.|+.-.. ..+..|. .++..++.+.. ...+++....+++|.+++.+|.|
T Consensus 84 ~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~-----------~~v~~~~~~~g--~~~d~~~i~~~~~V~~~h~~t~t 149 (378)
T PRK03080 84 LWSLLGARRVDHLA-WESFGSKWATDVVKQLKL-----------EDPRVLEADYG--SLPDLSAVDFDRDVVFTWNGTTT 149 (378)
T ss_pred HHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCC-----------CCceEeccCCC--CCCCHhhcCCCCCEEEEecCCcc
Confidence 5777774 444444 444444211 1133442 15555555432 22334333346678888999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeecccccccc
Q 045431 219 GAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 219 G~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~ 298 (433)
|..++ +++|++ +++|+++|+|.+++.... +..+..+ .+++.|.+|+++ +...+|+++++++.+.+
T Consensus 150 G~~~p---i~~I~~--~~~g~~~vVDa~qs~G~~---pidv~~i------D~~~~s~~K~l~-~P~G~g~l~v~~~~~~~ 214 (378)
T PRK03080 150 GVRVP---VARWIG--ADREGLTICDATSAAFAL---PLDWSKL------DVYTFSWQKVLG-GEGGHGMAILSPRAVER 214 (378)
T ss_pred ceecc---chhhcc--ccCCCeEEEecccccccC---CCCHHHC------cEEEEehhhhCC-CCCceEEEEECHHHHHh
Confidence 99999 666666 788999999999884221 3333332 388999999985 32348999999887632
Q ss_pred CCcchh-----------H---HHH-HHHhhccCCCcHHHH---HHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC
Q 045431 299 DGFPVA-----------K---DFN-RIVCTCFNGASNISQ---AGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG 360 (433)
Q Consensus 299 ~~~~~~-----------~---~~~-~~~~~~~~~~~~~~q---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 360 (433)
..+... . ... +....+.+.++.... .+++.++...+ .++++.++.++..+++.+.|++.+
T Consensus 215 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~g--G~e~i~~r~~~l~~~l~~~l~~~~ 292 (378)
T PRK03080 215 LESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIG--GLDALIARTAANASVLYDWAEKTP 292 (378)
T ss_pred hhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111100 0 011 111112233343333 33444554331 257888889999999999999885
Q ss_pred -Ceeec--C--CCccEEEEECCC---CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHH
Q 045431 361 -FKVYG--G--KNAPYVWVQFPG---RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKH 430 (433)
Q Consensus 361 -~~~~~--~--~~g~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~ 430 (433)
+.+.. + .++..+.+.+++ ....++...++++ |+.+..|... . ..+.+|+|+ +++.+|++.+++.|++
T Consensus 293 ~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~-~-~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 293 WATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYR-D-APNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeecccccc-C-CCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 55542 1 123456667765 2334566666665 8888776432 1 347899994 6799999999999988
Q ss_pred hh
Q 045431 431 LY 432 (433)
Q Consensus 431 ~l 432 (433)
++
T Consensus 370 ~~ 371 (378)
T PRK03080 370 AF 371 (378)
T ss_pred HH
Confidence 75
No 263
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.77 E-value=4.1e-17 Score=141.10 Aligned_cols=326 Identities=18% Similarity=0.195 Sum_probs=209.6
Q ss_pred CCceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCC----CHHHHHHHHHHHhccCCCCCCcEEEcCChH
Q 045431 62 DAEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSGYGAEQG----EKPLRAAIASTFYKDLGIEEGDIFVSDGAK 136 (433)
Q Consensus 62 ~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~la~~l~~~~~~~~~~i~~~~G~~ 136 (433)
+.++++|+.+++ .+...|++.++-++++.+++ .+..+-.-.-| ...|.+.||++ .-.+|.|+..++..
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyG--aGlssvrfIcGtq~iHk~LE~kiAqf-----h~rED~ilypscfd 138 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYG--AGLSSVRFICGTQDIHKLLESKIAQF-----HGREDTILYPSCFD 138 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhC--CCccceeEEecchHHHHHHHHHHHHH-----hCCCceEEeccccc
Confidence 457899998886 46788999999999999876 33332111333 35566666666 44667788777777
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCC
Q 045431 137 CDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSP 214 (433)
Q Consensus 137 ~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p 214 (433)
+...++.+++.|.|.|+-++..|.+..+.+++..+.+. + .+ ..+...+.. ..+-++|+....
T Consensus 139 ANag~feail~pedAvfSDeLNhASIIdGirLckry~h----------~---dv---~~l~~~l~~a~k~r~klv~TDg~ 202 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRH----------V---DV---FDLEHCLISACKMRLKLVVTDGV 202 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhhhhhHHHhhhcc----------c---hh---HHHHHHHHHhhhheEEEEEecce
Confidence 77777888899999999999999998888777663221 1 00 011111111 124454443344
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC-CCcceEEEeccccccc-ccccceeeeecc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG-AKEVAIETSSFSKYAG-FTGVRLGWTVIP 292 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~vi~i~S~sK~~~-~~G~r~G~l~~~ 292 (433)
-...|-+.| +++|.++++|||.++++||+|+.+.++.......+..+ ..+..+..++++|.+| +.| ||..+|
T Consensus 203 FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gyttgp 276 (417)
T KOG1359|consen 203 FSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTTGP 276 (417)
T ss_pred eccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCccCC
Confidence 566787777 88899999999999999999998666644433443322 2344588899999987 455 999999
Q ss_pred ccccccCCcchhHHHHHHH-hhccC-CCcH--H-HHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCC
Q 045431 293 KELLFSDGFPVAKDFNRIV-CTCFN-GASN--I-SQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGK 367 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 367 (433)
.+++ .-+++.- ...+. ..++ + ....+..++... .......+.+.+++++..+..|+.+.+.
T Consensus 277 ~~li--------~llrqr~RpylFSnslppavV~~a~ka~dllm~s-----~~~i~~~~a~~qrfr~~me~aGftIsg~- 342 (417)
T KOG1359|consen 277 KPLI--------SLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS-----SKEIQSRQANTQRFREFMEAAGFTISGA- 342 (417)
T ss_pred hhHH--------HHHHhcCCceeecCCCChhhhhhhHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHhcCceecCC-
Confidence 9995 3333211 11111 1121 1 111222222211 3445566778888888888889998763
Q ss_pred CccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCC--CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFG--PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~--~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.-+.+-+-+.. ..+.....++++. ||.|.. ..|. |.+...+|+.+ ..++++++++++++.++.
T Consensus 343 ~hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vig-fs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vg 410 (417)
T KOG1359|consen 343 SHPICPVMLGDARLASKMADELLKR-GIYVIG-FSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVG 410 (417)
T ss_pred CCCccceecccHHHHHHHHHHHHhc-CceEEe-ecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHH
Confidence 33444444442 2345677788876 999963 3332 34555677775 458999999999998864
No 264
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=2.6e-16 Score=153.55 Aligned_cols=351 Identities=12% Similarity=0.074 Sum_probs=202.3
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-CC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-EG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~~ 127 (433)
..+......+++..||+..|.- .+ ..+|.+.+++.+++.+... ....+.. .+....+++.|.+..+.. .+
T Consensus 31 a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~--~~~~~~~----~~~~~~lae~L~~~~p~~~~~ 104 (445)
T PRK08593 31 GYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIH--YTPAYMY----HEPLVRLAKKLCELAPGDFEK 104 (445)
T ss_pred eeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccC--ccccccC----CHHHHHHHHHHHHhCCCCCCC
Confidence 3344444566788999966642 22 3689999999999875421 1111112 233344444444322322 25
Q ss_pred cEEEcCChHHHHHHHHH---hcCCCCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCccCC-----c-
Q 045431 128 DIFVSDGAKCDISRLQI---VFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAENG-----F- 196 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~---l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~-----~- 196 (433)
.|+++++++++...... ......+|+..+.+|++.......+ +...-+ ..++.....+..+|..+... .
T Consensus 105 ~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 184 (445)
T PRK08593 105 RVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPD 184 (445)
T ss_pred EEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCc
Confidence 89999999999886322 2233457888888888765333322 211100 00111112233333221100 0
Q ss_pred ---c----cCCC-------CCCCccEEEEcCCCCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc
Q 045431 197 ---F----PDLS-------TVARTDIIFFCSPNNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261 (433)
Q Consensus 197 ---~----~~~~-------~~~~~~~i~l~~p~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~ 261 (433)
. ..++ ...++.+|++-..++..|.. .+++.+++|.++|++||+++|.||++..+...+.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~ 264 (445)
T PRK08593 185 ANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISH 264 (445)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHh
Confidence 0 0011 01345555543336667876 6899999999999999999999999987755543222222
Q ss_pred cCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHH
Q 045431 262 IPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEV 341 (433)
Q Consensus 262 ~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 341 (433)
+.-.+| +.+++|.++ .|+++|+++++++++ +.+.......+.+.++++++++.+.++.... +++
T Consensus 265 ~gv~pD----i~t~gK~l~-~G~p~gav~~~~~i~--------~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~---~~l 328 (445)
T PRK08593 265 FNITPD----LMSFGKSLA-GGMPMSAIVGRKEIM--------ESLEAPAHLFTTGANPVSCAAALATIDMIED---ESL 328 (445)
T ss_pred cCCCCC----Eeeeccccc-CCcccEEEEEcHHHH--------hhhccCCCCCCCCCCHHHHHHHHHHHHHHHh---ccH
Confidence 222234 337899998 889999999998875 3332222334556788888888887763221 234
Q ss_pred HHHHHHHHHHHHHHHhhc----CC-eeecCCCccEEEEECCCC------C---hHHHHHHHHHcCCeEecCCCCCCCCCC
Q 045431 342 IGFYKENTDIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR------S---SWDVFSEILEKTHVVTTPGSGFGPGGE 407 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~------~---~~~~~~~l~~~~gi~v~~g~~f~~~~~ 407 (433)
.++.+++.+++.+.|+++ ++ .-+. ..|.++.+.+... + ...+...++ ++||.+.+. ..
T Consensus 329 ~~~~~~~g~~l~~~L~~l~~~~~~v~~vr-G~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~------~~ 400 (445)
T PRK08593 329 LQRSAEKGEYARKRFDQWVSKYNFVGDVR-GYGLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAV------AG 400 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEe-ccceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEecc------CC
Confidence 555566666666666543 22 1122 2345555555310 1 234555555 459998653 13
Q ss_pred CeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 408 GFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 408 ~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+|++ +..+++++++++++|.+++
T Consensus 401 ~~lr~~p~l~~t~~~id~~~~~l~~~l 427 (445)
T PRK08593 401 NVLRFQPPLVITYEQLDTALNTIEQAF 427 (445)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 579988 4569999999999998875
No 265
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=3.5e-16 Score=150.43 Aligned_cols=219 Identities=13% Similarity=0.089 Sum_probs=142.8
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh----HHHhCCcccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDA 179 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 179 (433)
+-...|.+.+|++. +. +..++++++++|+.+ +.+++++||+|+++.++|.+.... +...|
T Consensus 61 Ptv~~lE~~la~le----g~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~G--------- 125 (432)
T PRK06702 61 PTLAAFEQKLAELE----GG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLG--------- 125 (432)
T ss_pred cHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCC---------
Confidence 35678888888885 33 457889999999986 678899999999999999876665 45566
Q ss_pred cccceEEEeecCcc-CCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 180 EKYGKIEYMRCTAE-NGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
+++.++....+ ..+... ..+++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|+. | .
T Consensus 126 ---i~v~~vd~~~d~~~l~~~--I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t------P-~ 190 (432)
T PRK06702 126 ---IDVTFFNPNLTADEIVAL--ANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT------P-Y 190 (432)
T ss_pred ---CEEEEECCCCCHHHHHHh--CCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc------h-h
Confidence 36666654211 111111 1368999998899999999998 88999999999999999999862 1 1
Q ss_pred ccccCCCCcceEEEecccc-----cccccccce-----eeeeccccccccCC--------------cchhH-HHHHHHhh
Q 045431 259 IFEIPGAKEVAIETSSFSK-----YAGFTGVRL-----GWTVIPKELLFSDG--------------FPVAK-DFNRIVCT 313 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK-----~~~~~G~r~-----G~l~~~~~~~~~~~--------------~~~~~-~~~~~~~~ 313 (433)
+...- ..+-.|++.|+|| ..+++|.++ +|...+...+.... ..+.. ........
T Consensus 191 ~~~pl-~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
T PRK06702 191 LCQAF-EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRD 269 (432)
T ss_pred hCChh-hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHH
Confidence 11100 0112399999999 555666665 45544322221000 00000 11111222
Q ss_pred ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 314 CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 314 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.....+++....+...|+ .+..+.++..++...+.+.|+++
T Consensus 270 ~g~~~sp~~a~l~~rgL~-----Tl~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 270 YGNCMSPFNAYISNIGLE-----TLHLRMERHSENALAVAKWLADH 310 (432)
T ss_pred ccCCCCHHHHHHHHhccC-----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 234566666665555554 34555666678999999999987
No 266
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.76 E-value=8.3e-17 Score=149.48 Aligned_cols=350 Identities=12% Similarity=0.151 Sum_probs=211.6
Q ss_pred HHHHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC
Q 045431 50 ARRKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE 126 (433)
Q Consensus 50 ~~~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~ 126 (433)
.+.++....+.+++..||+..+.-+ -..+|.+.+++.+++.+- ..|+.+ .++.-.+|+.+.+.++ ..
T Consensus 40 ~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G------~~fg~P---te~Ei~~Aell~~~~p-~~ 109 (432)
T COG0001 40 ERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG------LSFGAP---TELEVELAELLIERVP-SI 109 (432)
T ss_pred EeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhc------CCCCCC---CHHHHHHHHHHHHhcC-cc
Confidence 3445555666778889999888754 236788999999999752 345433 3455555555544333 34
Q ss_pred CcEEEcCChHHHHH-HH--HHhcCCCCEEEEeCCCChhhhhhHHH-hCCcccc-----cc---cccccceEEEeecCccC
Q 045431 127 GDIFVSDGAKCDIS-RL--QIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEF-----QK---DAEKYGKIEYMRCTAEN 194 (433)
Q Consensus 127 ~~i~~~~G~~~al~-~l--~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~-----~~---~~~~~~~~~~~~~~~~~ 194 (433)
|.|-+++++|+|.. ++ .+-....|+|+..+-||++..+.+.. +| .+.- .. .......+..+|.++..
T Consensus 110 e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~ag-sg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~ 188 (432)
T COG0001 110 EKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAG-SGAATLGSPSSPGVPADVAKHTLVLPYNDLE 188 (432)
T ss_pred cEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcC-cCcccCCCCCCCCCChhhhccEEEecCCCHH
Confidence 88989988888854 43 33455668999999999887665543 22 1110 00 00001123334443322
Q ss_pred CcccCCCCC-CCccEEEEcCC--CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCcccccCCCCcce
Q 045431 195 GFFPDLSTV-ARTDIIFFCSP--NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISD-DNPRSIFEIPGAKEVA 269 (433)
Q Consensus 195 ~~~~~~~~~-~~~~~i~l~~p--~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~v 269 (433)
.+...++.. .++.+|+ +.| .| .|.+. .++.+++|.++|++||+++|.||+...|... +....+..+. +|
T Consensus 189 al~~~~~~~g~~IAaVI-vEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~--PD-- 262 (432)
T COG0001 189 ALEEAFEEYGDDIAAVI-VEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVE--PD-- 262 (432)
T ss_pred HHHHHHHHcCCcEEEEE-eccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcC--cc--
Confidence 222222222 3556555 455 55 56644 5668899999999999999999999887655 3334444432 34
Q ss_pred EEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-h-HHHHHHHHHHH
Q 045431 270 IETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-K-AVHEVIGFYKE 347 (433)
Q Consensus 270 i~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~-~~~~~~~~~~~ 347 (433)
+.+|.|.+| .|+.+|.+.++.+++.. ......+....+...++++..|..+.++.... + ..+++.+.-.+
T Consensus 263 --lttlGKiIG-GGlP~ga~gGr~eiM~~-----~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~ 334 (432)
T COG0001 263 --LTTLGKIIG-GGLPIGAFGGRAEIMEQ-----LAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGER 334 (432)
T ss_pred --hhhhhhhhc-CCcceeeeccHHHHHhh-----hCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 558999998 99999999999888622 11222334445556788888888877763221 1 12333333333
Q ss_pred HHHHHHHHHhhcCCeeecC-CCccEEEEECCC--C------------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEE
Q 045431 348 NTDIIVETFNSLGFKVYGG-KNAPYVWVQFPG--R------------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRV 412 (433)
Q Consensus 348 ~~~~l~~~l~~~g~~~~~~-~~g~~~~~~~~~--~------------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 412 (433)
.++-+.+.+.++|+.+... .+++|- +.+.. . .-..++..++++ ||.+.|+.. +..+ +
T Consensus 335 L~~gl~~~~~~~g~~~~v~~~gsm~~-i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~-----ea~f-l 406 (432)
T COG0001 335 LAEGLRAAAERHGIPLTVNRVGSMFG-IFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQF-----EAGF-L 406 (432)
T ss_pred HHHHHHHHHHHhCCCeEEeeecceEE-EEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCccc-----ccee-e
Confidence 3344444455567766433 244432 22221 0 123456666665 999988642 2222 6
Q ss_pred eeccChhHHHHHHHHHHHhh
Q 045431 413 SAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 413 ~~~~~~~~l~~~l~~l~~~l 432 (433)
|...++++|++.++++.+++
T Consensus 407 S~ahte~di~~~~~a~~~~~ 426 (432)
T COG0001 407 STAHTEEDIDRTLEAADEAF 426 (432)
T ss_pred ecccCHHHHHHHHHHHHHHH
Confidence 77889999999999998765
No 267
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.76 E-value=3.6e-16 Score=148.53 Aligned_cols=320 Identities=13% Similarity=0.135 Sum_probs=195.4
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCH---HHHHHHHHHHhccCCCC-CCcEEEc-CChHHHHHH-HHHhcCC
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEK---PLRAAIASTFYKDLGIE-EGDIFVS-DGAKCDISR-LQIVFGS 148 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~---~lr~~la~~l~~~~~~~-~~~i~~~-~G~~~al~~-l~~l~~~ 148 (433)
...|+.+++++...+.++. ..+...+....-.+ ++-+.+.+.+.+-++.+ ..+|+++ ++++.++++ +..++.+
T Consensus 12 ~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~ 90 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGG 90 (360)
T ss_pred CCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCC
Confidence 4689999999999875432 12222232222223 34344444444434653 3456655 556777887 6889999
Q ss_pred CCEEEEeCCCChhh--hhhHHHhCCcccccccccccceEEEeecCccCCc--ccCCCC---CCCccEEEEcCCCCccccC
Q 045431 149 NVTMAVQDPSYPAY--VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF--FPDLST---VARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 149 gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~i~l~~p~nPtG~~ 221 (433)
||++++...+..+. ...++..|. . ..+..++..+. ..++++ .+++++|.+++..+.||+.
T Consensus 91 g~~~l~i~~G~fg~r~~~~a~~~g~------------~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 91 GKKADYVDTGSWSKKAIKEAKKYGE------------V-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTE 157 (360)
T ss_pred CCeEEEEECCHHHHHHHHHHHHhCC------------c-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEe
Confidence 99998887777664 344555552 2 23332211111 112111 2478999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCc
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF 301 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~ 301 (433)
.+ .+++| +|+++|+|.+.+.. ..+..+..+ + +++.|..|.+|.+| +|+++++++.+.+..+
T Consensus 158 ~~--~i~~i------~g~l~vVDavss~g---~~~idv~~~----d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~ 218 (360)
T PRK05355 158 FH--ELPDT------GDVPLVADMSSDIL---SRPIDVSKF----G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALP 218 (360)
T ss_pred cC--ccccc------CCCcEEEEcCcccc---CccCCHHHc----c--EEEEeccccccCCc--eEEEEECHHHHhhccc
Confidence 84 25554 89999999998832 123434332 2 77888899998767 8999999988744222
Q ss_pred chh--HHHHH-HH-hhccCCCcHHHHHHHHHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhcCCe-e-ec--CCCccEE
Q 045431 302 PVA--KDFNR-IV-CTCFNGASNISQAGGLACLSPEGFK-AVHEVIGFYKENTDIIVETFNSLGFK-V-YG--GKNAPYV 372 (433)
Q Consensus 302 ~~~--~~~~~-~~-~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~-~-~~--~~~g~~~ 372 (433)
... -++.. .. .....+++.....+..++|+..... .++++.++.++..+.+++.|+++++. . .. ......+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~ 298 (360)
T PRK05355 219 SIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNV 298 (360)
T ss_pred CCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEE
Confidence 111 11111 11 1122334444444444444422123 36888999999999999999998742 2 11 1223456
Q ss_pred EEECCCC-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 373 WVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 373 ~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+.+++. ...++...+. ++|+.+.+|.. ..+.+|+|+ +++.+|++.+++.|++++
T Consensus 299 sf~~~~~~~~~~~~~~~~-~~Gi~~~~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~ 356 (360)
T PRK05355 299 PFTLADEELDKKFLAEAK-AAGLVGLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFE 356 (360)
T ss_pred EEEcCChHHHHHHHHHHH-HCCCcccCCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 6777753 2234445544 45999877652 246899996 568999999999999875
No 268
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.75 E-value=2e-15 Score=145.49 Aligned_cols=303 Identities=15% Similarity=0.110 Sum_probs=183.6
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh-cCCCCEEEEe
Q 045431 78 PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV-FGSNVTMAVQ 155 (433)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l-~~~gd~Vl~~ 155 (433)
.+.-.+++.+.+.. .. |.......+|++++++++ +.+ +.++++|+++++.+ +.++ +++||+|+++
T Consensus 9 ~~~~~~~v~~~~~~-----~~--~~~g~~~~~le~~la~~~----g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~ 75 (380)
T TIGR03588 9 DQDDIDAVVEVLKS-----DF--LTQGPTVPAFEEALAEYV----GAK--YAVAFNSATSALHIACLALGVGPGDRVWTT 75 (380)
T ss_pred CHHHHHHHHHHHhc-----CC--ccCChhHHHHHHHHHHHH----CCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeC
Confidence 44456677776652 11 223446799999999998 543 45566678889887 5666 7899999999
Q ss_pred CCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--C----CCccEEEEcCCCCccccCCCHHH
Q 045431 156 DPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--V----ARTDIIFFCSPNNPTGAAATREQ 226 (433)
Q Consensus 156 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~----~~~~~i~l~~p~nPtG~~~~~~~ 226 (433)
.|+|.++...+...| .+++.++.+++. +..+++ + . +++++|++ .|++|...+
T Consensus 76 ~~~~~~~~~~~~~~G------------~~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~--- 136 (380)
T TIGR03588 76 PITFVATANCALYCG------------AKVDFVDIDPDT-GNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD--- 136 (380)
T ss_pred CcchHHHHHHHHHcC------------CEEEEEecCCCc-CCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---
Confidence 999999988888888 478888876432 222221 1 2 46788775 456898766
Q ss_pred HHHHHHHHHHcCCEEEEecccccc-ccCCCCCcccccCCCCcceEEEeccc--ccccccccceeeeeccccccccCCcch
Q 045431 227 LTRLVQFAKDNGSIIVYDSAYALY-ISDDNPRSIFEIPGAKEVAIETSSFS--KYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 227 ~~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~vi~i~S~s--K~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
+++|.++|++||++||+|++++.. .+++.+ +... ...| +.+.||+ |.++ .| ..|+++.+++.+
T Consensus 137 ~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~--~g~~-~~~d--~~~~S~~~~K~~~-~~-~GG~v~~~~~~~------- 202 (380)
T TIGR03588 137 MQAIAALAKKHGLKIIEDASHALGAEYGGKP--VGNC-RYAD--ATVFSFHPVKIIT-TA-EGGAVTTNDEEL------- 202 (380)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccCccCCEe--CCCc-cccc--eEEEecCCCCccc-cc-CceEEEECCHHH-------
Confidence 788899999999999999999853 233322 2111 0123 6666765 8886 33 457777665443
Q ss_pred hHHHHHHHhhcc-------------------------CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh
Q 045431 304 AKDFNRIVCTCF-------------------------NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 304 ~~~~~~~~~~~~-------------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
.+.++....... ...+.+..+.+..-| +.+++..++-+++.+++.+.|.+
T Consensus 203 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~ 277 (380)
T TIGR03588 203 AERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKD 277 (380)
T ss_pred HHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcC
Confidence 233332221110 011222222122212 23466666677777788888887
Q ss_pred c-CCeeecCC-C---ccE-EEEECC---CCChHHHHHHHHHcCCeEecCCCCC-------CC--C-C---------CCeE
Q 045431 359 L-GFKVYGGK-N---APY-VWVQFP---GRSSWDVFSEILEKTHVVTTPGSGF-------GP--G-G---------EGFI 410 (433)
Q Consensus 359 ~-g~~~~~~~-~---g~~-~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f-------~~--~-~---------~~~i 410 (433)
. ++....+. + .++ ..+.++ +....++...| +++||.++..... .. . . ...+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l 356 (380)
T TIGR03588 278 LPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEI 356 (380)
T ss_pred CCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceE
Confidence 6 34433221 1 122 223333 23455666665 5569988744311 00 0 0 1457
Q ss_pred EEee--ccChhHHHHHHHHHHHhh
Q 045431 411 RVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 411 Ri~~--~~~~~~l~~~l~~l~~~l 432 (433)
++.+ ..++++++..++.|+++|
T Consensus 357 ~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 357 SLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred EcCCCCCCCHHHHHHHHHHHHHhC
Confidence 7765 348999999999999875
No 269
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.75 E-value=1.5e-16 Score=138.62 Aligned_cols=317 Identities=17% Similarity=0.194 Sum_probs=204.0
Q ss_pred CCceEEecCCCCC-CCChHH---HHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEE--EcC
Q 045431 62 DAEVISLGIGDTT-EPIPEV---ITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIF--VSD 133 (433)
Q Consensus 62 ~~~~i~l~~g~~~-~~~~~~---~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~--~~~ 133 (433)
++.-++|+.|.+. ....|- +.+.....+.+. ...-+.|-|..|.+.++++.++.+-. -..+..+.++ -+-
T Consensus 29 ~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d--~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQsl 106 (410)
T KOG1412|consen 29 DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIAND--QSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSL 106 (410)
T ss_pred CcceeecccceEEcCCCCeeEehhhhhhhhhccCc--hhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeec
Confidence 3345888888762 122222 222333333221 13345899999999999999998743 2223444432 223
Q ss_pred ChHHHHHH---HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccC-------CcccCCCCC
Q 045431 134 GAKCDISR---LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN-------GFFPDLSTV 203 (433)
Q Consensus 134 G~~~al~~---l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 203 (433)
+++.|+.+ +..-+-....|.+..|+|.+...+++.+|-.. +..++.=+.+ +++.+++..
T Consensus 107 sGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~t-----------v~~Y~yWd~~~k~~d~e~~Lsdl~~A 175 (410)
T KOG1412|consen 107 SGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTT-----------VATYPYWDAENKCVDLEGFLSDLESA 175 (410)
T ss_pred cccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCce-----------eeeeeeecCCCceecHHHHHHHHhhC
Confidence 34444432 33333345679999999999999999998432 2222221111 223334444
Q ss_pred CCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc---cCCCCcceEEEecccccc
Q 045431 204 ARTDIIFFCSP-NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE---IPGAKEVAIETSSFSKYA 279 (433)
Q Consensus 204 ~~~~~i~l~~p-~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~---~~~~~~~vi~i~S~sK~~ 279 (433)
+.-..+++..+ |||||+-.+.|+++.|++..++.+.+.+.|-+|.+|..++....... +-....-++++-||+|.+
T Consensus 176 Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNf 255 (410)
T KOG1412|consen 176 PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNF 255 (410)
T ss_pred CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhc
Confidence 44455566655 99999999999999999999999999999999999877653222221 111123478999999999
Q ss_pred cccccceeeee--ccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh--h---HHHHHHHHHHHHHHHH
Q 045431 280 GFTGVRLGWTV--IPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF--K---AVHEVIGFYKENTDII 352 (433)
Q Consensus 280 ~~~G~r~G~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~--~---~~~~~~~~~~~~~~~l 352 (433)
|+-+-|+|-+. +.+.-. ...+...+..+.......++......+...|..... + .++.+..+++++|..|
T Consensus 256 GlYneRvGnltvv~~n~a~---i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aL 332 (410)
T KOG1412|consen 256 GLYNERVGNLTVVVNNPAV---IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTAL 332 (410)
T ss_pred ccccccccceEEEecChhH---HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999643 333321 222334455555556666777777878888885544 2 3677777899999999
Q ss_pred HHHHhhcC----CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecC
Q 045431 353 VETFNSLG----FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTP 398 (433)
Q Consensus 353 ~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 398 (433)
++.|..++ |+-+..+.|+|-+-.+. + ..++.|.+++.|.+.+
T Consensus 333 rd~L~aL~TPGtWDHI~~QiGMFSyTGLt---p-~qV~~li~~h~vyLl~ 378 (410)
T KOG1412|consen 333 RDHLVALKTPGTWDHITQQIGMFSYTGLT---P-AQVDHLIENHKVYLLS 378 (410)
T ss_pred HHHHHhcCCCCcHHHHHhhccceeecCCC---H-HHHHHHHHhceEEEec
Confidence 99998873 44444567888765553 2 4567788888999865
No 270
>PRK07678 aminotransferase; Validated
Probab=99.73 E-value=2.1e-15 Score=147.52 Aligned_cols=354 Identities=10% Similarity=0.037 Sum_probs=202.6
Q ss_pred HHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.. . -..+|.+.+++.+++.+... .. ..|. . +....+|+.+.+..+. .+.
T Consensus 36 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~-~~~~-~----~~~~~lae~l~~~~~~-~~~ 107 (451)
T PRK07678 36 AEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY-FP-LTQS-H----EPAIKLAEKLNEWLGG-EYV 107 (451)
T ss_pred eeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc-cc-cccC-C----HHHHHHHHHHHHhCCC-CCE
Confidence 4444455667788999876642 2 23678999999999876421 11 1121 1 2233444444432232 358
Q ss_pred EEEcCChHHHHHH-H---HHhc----CCC-CEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccCCc--
Q 045431 129 IFVSDGAKCDISR-L---QIVF----GSN-VTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAENGF-- 196 (433)
Q Consensus 129 i~~~~G~~~al~~-l---~~l~----~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 196 (433)
+++++++++|... + .... ++| .+|+..+.+|++.............+ ..++.....+..++.......
T Consensus 108 v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (451)
T PRK07678 108 IFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPG 187 (451)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccc
Confidence 9999999998875 3 1122 123 57888888888865433322211100 001111112222322110000
Q ss_pred -------cc----CCC-----C-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 197 -------FP----DLS-----T-VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 197 -------~~----~~~-----~-~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
.. .++ . .+++.+|+ ..| +.-.|.+ .+++.++++.++|++||+++|.||++..|...|...
T Consensus 188 ~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi-~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 266 (451)
T PRK07678 188 IESEDIYDLECVKEIDRVMTWELSETIAAVI-MEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF 266 (451)
T ss_pred cCChHHHHHHHHHHHHHHHHhcCCCceEEEE-EccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH
Confidence 00 011 1 13455544 456 4445655 577899999999999999999999998886655433
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH------HHhhccCCCcHHHHHHHHHhc
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR------IVCTCFNGASNISQAGGLACL 330 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l 330 (433)
....+.-.+| ++ +++|.+| .| +.+|.+++++++. +.+.. +...++.+.++++.+++.+.|
T Consensus 267 ~~~~~gv~PD-iv---t~gK~lg-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l 333 (451)
T PRK07678 267 GFMNYGVKPD-II---TMAKGIT-SAYLPLSATAVKKEIY--------EAFKGKGEYEHFRHVNTFGGNPAACALALKNL 333 (451)
T ss_pred HHHhcCCCCC-EE---Eeecccc-cCCcceeEEEEcHHHH--------HHHhccCcccccccCCCCCcCHHHHHHHHHHH
Confidence 3333332345 23 6899998 77 6999999998874 33331 234566778899999888888
Q ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHh----hcCCee-ecCCCccEEEEECCCC-------C---hHHHHHHHHHcCCeE
Q 045431 331 SPEGFKAVHEVIGFYKENTDIIVETFN----SLGFKV-YGGKNAPYVWVQFPGR-------S---SWDVFSEILEKTHVV 395 (433)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~-~~~~~g~~~~~~~~~~-------~---~~~~~~~l~~~~gi~ 395 (433)
+.... +.+.++.++..+++.+.|+ ++++.. +. ..|.++-+.+... + ...+...++ ++||.
T Consensus 334 ~~l~~---~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vr-g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~ 408 (451)
T PRK07678 334 EIMEN---ENLIERSAQLGELLLEQLKEELGEHPLVGDIR-GKGLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLI 408 (451)
T ss_pred HHHHh---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-eeceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcE
Confidence 63221 2334445555555555553 333221 22 2455555665310 1 223444544 45999
Q ss_pred ecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 396 TTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 396 v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+....-+...+.+||+ +..+++|+++++++|.+++
T Consensus 409 ~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l 447 (451)
T PRK07678 409 IGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTAL 447 (451)
T ss_pred EeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 976322111234679998 4569999999999999876
No 271
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.73 E-value=2.6e-15 Score=142.08 Aligned_cols=331 Identities=8% Similarity=0.037 Sum_probs=197.0
Q ss_pred HhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....+++..+|+..|.. .+ ..+|.+.+++.+++.+... ....| ......+|.+.++++. + .+.+++++
T Consensus 18 l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~--~~~~~-~~~~~~~la~~l~~~~----~--~~~v~~~~ 88 (364)
T PRK04013 18 VWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVV--AGPMF-EHEEKEEMLEELSKWV----N--YEYVYMGN 88 (364)
T ss_pred EEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCC--ccCCc-CCHHHHHHHHHHHhhc----C--CCEEEEeC
Confidence 44556778999977642 22 3668888999999876421 11123 2233344555555542 3 36899999
Q ss_pred ChHHHHHHHHHh--cCCC-CEEEEeCCCChhhhhhHHHhC-CcccccccccccceEEEeecCccCCcccCCCCCCCccEE
Q 045431 134 GAKCDISRLQIV--FGSN-VTMAVQDPSYPAYVDSSVIMG-QTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDII 209 (433)
Q Consensus 134 G~~~al~~l~~l--~~~g-d~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 209 (433)
++++|+.+...+ ...| ++|+..+.+|++......... .......++.....+..++.++...+...+ ..++.+|
T Consensus 89 SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i--~~~~aAv 166 (364)
T PRK04013 89 SGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAI--TKETAAV 166 (364)
T ss_pred chHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHh--cCCcEEE
Confidence 999999863222 2244 899999999988653333221 111001111112233444433111111111 2467776
Q ss_pred EEcCCCCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceee
Q 045431 210 FFCSPNNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 210 ~l~~p~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
++...+...|. ..+.+.++++.++|++||+++|+||++..+ ..|.......+.-.+| +-+++|.+| .|+.+|.
T Consensus 167 ivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PD----iv~~gK~lg-gG~P~~a 240 (364)
T PRK04013 167 IFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD----IVTMGKGIG-NGVPVSL 240 (364)
T ss_pred EEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCC----EEEeccccc-CCceeEE
Confidence 66443554555 456789999999999999999999999987 5554333333322344 335799998 7899999
Q ss_pred eeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCC
Q 045431 289 TVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKN 368 (433)
Q Consensus 289 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 368 (433)
++.+.++. . ....++++.++++.+++.+.|+....+ ++.++.++. + +.+..--+.-+. ..
T Consensus 241 ~~~~~~~~--------~----~~~~~T~~gnp~~~aaa~a~l~~i~~~---~l~~~~~~~---l-~~l~~~~v~~vR-G~ 300 (364)
T PRK04013 241 TLTNFDVE--------R----GKHGSTFGGNPLACKAVAVTLRILRRE---RLVEKAGEK---F-IEIKGERVVTTR-GR 300 (364)
T ss_pred EEeccccc--------C----CCcCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHH---H-HHhccCcceeee-eC
Confidence 98876651 1 134556678899998888887632221 112222221 1 122211111122 24
Q ss_pred ccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 369 APYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 369 g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|+++-+.+.. ....+...+++ +|+.+.+. +.+.+||. +..+++++++++++|.+++
T Consensus 301 Gl~~gve~~~-~~~~i~~~~~~-~Gll~~~~------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l 358 (364)
T PRK04013 301 GLMIGIVLKK-PVGKYVEELQN-RGYLVHTA------GQRVIRLLPPLIISKDTMEEAKSAIEGVI 358 (364)
T ss_pred cEEEEEEeCC-cHHHHHHHHHh-CCcEEeeC------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 6777777753 24455556555 59999653 24679999 5679999999999999876
No 272
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.73 E-value=1.9e-15 Score=145.11 Aligned_cols=296 Identities=15% Similarity=0.100 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHhccCCCC-CCcEEEcCChH-HHHHHHHHhcC----CCCEEEEeCCCChhhhhhHHHhCCcccccccccc
Q 045431 108 KPLRAAIASTFYKDLGIE-EGDIFVSDGAK-CDISRLQIVFG----SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEK 181 (433)
Q Consensus 108 ~~lr~~la~~l~~~~~~~-~~~i~~~~G~~-~al~~l~~l~~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 181 (433)
..+...+.+++.+.+|++ .+..++++|++ .++.++...++ +||.|+++.-+|.+...++..+|
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G----------- 172 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAG----------- 172 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcC-----------
Confidence 344444444444434664 34588888888 46665444444 68999999999999999999999
Q ss_pred cceEEEeecC-ccCCcccCCCC-----CC---CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Q 045431 182 YGKIEYMRCT-AENGFFPDLST-----VA---RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252 (433)
Q Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~-----~~---~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~ 252 (433)
++++.++.. +++.+..+++. .+ +..++++++|+ |+...+.+++++|.++|++||+++|+|++|+....
T Consensus 173 -~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~ 249 (444)
T TIGR03531 173 -FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN 249 (444)
T ss_pred -CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh
Confidence 467777741 22344444332 12 45566666665 55555677899999999999999999999995211
Q ss_pred CCCCCcc--cccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhc
Q 045431 253 DDNPRSI--FEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACL 330 (433)
Q Consensus 253 ~~~~~~~--~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 330 (433)
. ...+ .... ...-.+++.|++|++.++|+ .|.++++++.+ .+.+..... ....+.+.|.+...++
T Consensus 250 ~--~~~~~~~g~~-~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el-------~~~i~~~y~--g~~~~s~~~~~~~~ll 316 (444)
T TIGR03531 250 K--YMELINKAIK-VGRVDAVVSSTDKNFMVPVG-GAIIYSFDENF-------IQEISKSYP--GRASASPSLDVLITLL 316 (444)
T ss_pred h--hhhhhhcccc-ccCCCeEEEeCccCCCCCCC-EEEEEECCHHH-------HHHHHHhcc--CCCCChHHHHHHHHHH
Confidence 1 1111 1111 00113667899999987775 34444633332 244433221 1224456777666666
Q ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHhhc----CCeeecC-CCccEEEEECC---CCChHHHHHHHHHcCCe----EecC
Q 045431 331 SPEGFKAVHEVIGFYKENTDIIVETFNSL----GFKVYGG-KNAPYVWVQFP---GRSSWDVFSEILEKTHV----VTTP 398 (433)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~-~~g~~~~~~~~---~~~~~~~~~~l~~~~gi----~v~~ 398 (433)
. .+.+.++++.++..++++++.+.|+++ |..+... ....-+.+.+. +.+...+-..|..+ +| .|.|
T Consensus 317 ~-~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~-~v~g~r~v~~ 394 (444)
T TIGR03531 317 S-LGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSR-RVTGPRVVTN 394 (444)
T ss_pred H-hCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhC-CCCCceeecC
Confidence 4 555778899999999999998888764 6666543 22233444444 33444444444433 55 2456
Q ss_pred CC-------CC---CCCCC----CeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 399 GS-------GF---GPGGE----GFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 399 g~-------~f---~~~~~----~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|. .| +.+.+ .++-++ +..+.+|++..+++|.+++
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 395 GDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 66 23 22111 144344 3558999999999998864
No 273
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.73 E-value=7.2e-15 Score=143.29 Aligned_cols=349 Identities=10% Similarity=0.059 Sum_probs=205.9
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC-CCC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI-EEG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~-~~~ 127 (433)
..+......+++..||+..|.. .+ ..++.+.+++.+++.+... .....|. .+....+|+.+....+- ..+
T Consensus 43 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~-----~~~~~~lAe~L~~~~p~~~~~ 116 (441)
T PRK05769 43 GEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLH-YSLTDFY-----YEPAVELAERLVEIAPGGFEK 116 (441)
T ss_pred cceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccC-ccCcccC-----CHHHHHHHHHHHHhCCCCCCC
Confidence 3344445566788999977753 22 3678899999999876321 1111121 23445556655432222 236
Q ss_pred cEEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCcc-------CC
Q 045431 128 DIFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAE-------NG 195 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~-------~~ 195 (433)
.+++++++++|... + .......++|+..+-+|++.......+ +..... ..++.....+..++.... .+
T Consensus 117 ~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (441)
T PRK05769 117 KVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIEN 196 (441)
T ss_pred EEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCc
Confidence 89999999999886 4 122234567888888888866443333 211110 111111122333333110 00
Q ss_pred c-------ccCCC--------CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 196 F-------FPDLS--------TVARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 196 ~-------~~~~~--------~~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
. ...++ ...++.+| +..| +.-.|.. .+.+.+++|.++|++||+++|.||++..+...+....
T Consensus 197 ~~~~~~~~~~~le~~~~~~~~~~~~iaav-i~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a 275 (441)
T PRK05769 197 PEECGNAVLDFIEDYLFKKLVPPEEVAAI-IVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFA 275 (441)
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCceEEE-EECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceeh
Confidence 0 00011 11344554 4466 4555664 4688999999999999999999999997755554332
Q ss_pred ccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 259 IFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
...+.-.+| ++ +|||.++ .|+++|++++++++. . +.......+.+.++++++++.+.|+.. +.
T Consensus 276 ~~~~gv~pD-iv---t~~K~l~-~G~p~gav~~~~~i~--------~-~~~~~~~~T~~g~p~~~aaa~a~L~~l--~~- 338 (441)
T PRK05769 276 IEHFGVEPD-II---TLAKAIA-GGLPLGAVIGRAELM--------F-LPPGSHANTFGGNPVAAAAALATLEEL--EE- 338 (441)
T ss_pred hhccCCCCC-EE---EEccccc-CCcccEEEEEehhhh--------h-cCCCCCCCCCCcCHHHHHHHHHHHHHH--HH-
Confidence 222322234 33 5899998 899999999988874 1 111123344456888888888887622 11
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC--Ceeec--CCCccEEEEECCCC-------ChHHHHHHHHHcCCeEecCCCCCCCCCC
Q 045431 339 HEVIGFYKENTDIIVETFNSLG--FKVYG--GKNAPYVWVQFPGR-------SSWDVFSEILEKTHVVTTPGSGFGPGGE 407 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~g--~~~~~--~~~g~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~ 407 (433)
++.++.+++.+++.+.|+++. ..+.. ...|.++-+.+... ....+...++ ++||.+.+. +.
T Consensus 339 -~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~~------~~ 410 (441)
T PRK05769 339 -GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLGA------GK 410 (441)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEecC------CC
Confidence 556677777777777776642 22211 12355666666321 1223444544 459998652 23
Q ss_pred CeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 408 GFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 408 ~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+|++ +..+++++++++++|.+++
T Consensus 411 ~~lr~~p~l~~t~~~id~~~~~l~~~l 437 (441)
T PRK05769 411 SAIRIIPPLIITEEEADIGLEILEEAI 437 (441)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 679998 4569999999999998876
No 274
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=1.3e-15 Score=148.82 Aligned_cols=349 Identities=11% Similarity=0.071 Sum_probs=206.6
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.. .+ ..+|.+.+++.+++.+... .....+. .+.+..+|+.+.+..+...+.
T Consensus 43 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~~-----~~~~~~lAe~L~~~~p~~~~~ 116 (453)
T PRK06943 43 GEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEH-AMLAGCT-----HEPAIELAERLAALTGGTLGH 116 (453)
T ss_pred cccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCC-ccccccC-----CHHHHHHHHHHHHhCCCCCCE
Confidence 3444445566788999976642 22 3679999999999876421 1111221 234455666554422333368
Q ss_pred EEEcCChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccCCc--
Q 045431 129 IFVSDGAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAENGF-- 196 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 196 (433)
+++++++++|......+. ....+|+..+.+|++.......+.....+ ..++.....+..++.......
T Consensus 117 v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 196 (453)
T PRK06943 117 AFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARP 196 (453)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcccccc
Confidence 999999999988632221 12367898999998865332222211111 111111112222322111000
Q ss_pred -----------ccCCC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 197 -----------FPDLS----T-VARTDIIFFCSP--NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 197 -----------~~~~~----~-~~~~~~i~l~~p--~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
..+++ . ..++.+|++ .| +.-.|. ..+++.++++.++|++||+++|.||++..+...|...
T Consensus 197 ~~~~~~~~~~~~~~l~~~l~~~~~~iAAvii-EPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f 275 (453)
T PRK06943 197 GETAADVAARALADVRRLFAERAGKIAALIV-EPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF 275 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEE-eccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh
Confidence 00111 1 134555554 55 566676 4588899999999999999999999999886655433
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH------HHhhccCCCcHHHHHHHHHhc
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR------IVCTCFNGASNISQAGGLACL 330 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l 330 (433)
....+.-.+| ++ +++|.++ .| +.+|.+++++++. +.+.. +...++.+.++++.+++.+.|
T Consensus 276 a~~~~gv~PD-iv---t~gKgl~-gG~~Pi~av~~~~ei~--------~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L 342 (453)
T PRK06943 276 ACEQAGVWPD-FL---CLSKGIS-GGYLPLSLVLSRDAIF--------AAFYDDDVTRGFLHSHSYTGNPLACRAALATL 342 (453)
T ss_pred HHHhCCCCCC-eE---eeehhhc-cCcccceEEEEcHHHH--------HhhcccCccCCccCCCCCCCCHHHHHHHHHHH
Confidence 3333333345 33 5799998 88 5999999998874 33321 224455667889988888887
Q ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHhhc----CCeeecCCCccEEEEECC-CCC-----hHHHHHHHHHcCCeEecCCC
Q 045431 331 SPEGFKAVHEVIGFYKENTDIIVETFNSL----GFKVYGGKNAPYVWVQFP-GRS-----SWDVFSEILEKTHVVTTPGS 400 (433)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~~~~~-~~~-----~~~~~~~l~~~~gi~v~~g~ 400 (433)
+.... +++.++.+++-+++.+.|+++ ++.-+. ..|+++-+.+. ..+ ...+...++ ++||.+.+.
T Consensus 343 ~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~~~~~~~~~i~~~~~-~~Gll~~~~- 416 (453)
T PRK06943 343 DLFAE---DDVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIFAFDVALDGDAARTFSRRFFEAAL-ERELLLRPI- 416 (453)
T ss_pred HHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEEEEEEccCCCcchHHHHHHHHHHH-HCCcEEEec-
Confidence 63221 234455555566666666553 232232 24566666664 111 223445555 459999753
Q ss_pred CCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 401 GFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 401 ~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+ +.+||+ +..+++++++++++|.+++
T Consensus 417 -----g-~~l~~~Ppl~it~~eid~~~~~l~~al 444 (453)
T PRK06943 417 -----G-TTVYLMPPYVLDDDEIAWLAERTRATL 444 (453)
T ss_pred -----C-CEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 1 359998 6789999999999998876
No 275
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=1.2e-15 Score=148.01 Aligned_cols=350 Identities=7% Similarity=0.023 Sum_probs=203.7
Q ss_pred HHHHHHhcCCCCceEEecCCC--CCC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGD--TTE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
..+......+++..+|+..|. ..+ ..+|.+.+++.+++.+... .....+ ......+|-+.+++.+ +...+.
T Consensus 33 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~-~~~~~~~lae~L~~~~----p~~~~~ 106 (429)
T PRK06173 33 ADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSH-IMFGGF-THEPAVELAQKLLEIL----PPSLNK 106 (429)
T ss_pred ceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCC-cccccc-CCHHHHHHHHHHHhhC----CCCcCE
Confidence 334444556677899987653 222 3678999999999876421 111112 2223334444444432 334578
Q ss_pred EEEcCChHHHHHHHHHh---c-----CC-CCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCccC---
Q 045431 129 IFVSDGAKCDISRLQIV---F-----GS-NVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAEN--- 194 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l---~-----~~-gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~--- 194 (433)
+++++++++|++....+ . ++ ..+|+....+|++.......+ +....+ ..++.....+..+|.....
T Consensus 107 v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 186 (429)
T PRK06173 107 IFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGE 186 (429)
T ss_pred EEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccch
Confidence 99999999998863222 1 13 357888888888853222111 211000 0011111112223221100
Q ss_pred C----cc----cCCCC-CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc
Q 045431 195 G----FF----PDLST-VARTDIIFFCSP--NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 195 ~----~~----~~~~~-~~~~~~i~l~~p--~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
. .. ..++. ..++.+|+ ..| +.-.|.. .+++.++++.++|++||+++|.||++..+...|.......+
T Consensus 187 ~~~~~~l~~l~~~i~~~~~~iAAvi-~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~ 265 (429)
T PRK06173 187 EWNDEAIEPLQDLLEQKGDEIAALI-LEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHA 265 (429)
T ss_pred hHHHHHHHHHHHHHHhCCCcEEEEE-EcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhc
Confidence 0 00 00111 13455555 455 5666765 68889999999999999999999999776444433222223
Q ss_pred CCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-----HHhhccCCCcHHHHHHHHHhcCcCChh
Q 045431 263 PGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-----IVCTCFNGASNISQAGGLACLSPEGFK 336 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~q~~~~~~l~~~~~~ 336 (433)
.-.+| ++ +|+|.++ .| +.++.+++++++. +.+.. +...++.+.++++.+++.+.|+....
T Consensus 266 gv~PD-iv---~~gK~l~-gG~~p~~a~~~~~~i~--------~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~- 331 (429)
T PRK06173 266 GVVPD-IM---CIGKALT-GGYLTLSATITTEAIA--------QTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE- 331 (429)
T ss_pred CCCCC-EE---Eeehhhh-CCccccceEEecHHHH--------HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-
Confidence 22344 22 4899997 78 4788888887764 33321 22334455678888888887763211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CCeeecC--CCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEE
Q 045431 337 AVHEVIGFYKENTDIIVETFNSL-GFKVYGG--KNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRV 412 (433)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 412 (433)
+...++++++.+.+.+.|++. +...+.. ..|+++-+.+... ....+...++ ++||.+.+. + +.+||
T Consensus 332 --~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~-e~Gi~v~~~------g-~~l~~ 401 (429)
T PRK06173 332 --SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFV-EHGIWVRPF------G-KLVYI 401 (429)
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHH-HCCeEEEec------C-CEEEE
Confidence 234666777777777777754 3332221 2466666777532 3345555555 459999763 1 47999
Q ss_pred e--eccChhHHHHHHHHHHHhh
Q 045431 413 S--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 413 ~--~~~~~~~l~~~l~~l~~~l 432 (433)
. +..+++++++++++|.+++
T Consensus 402 ~Ppl~it~~ei~~~~~~l~~~l 423 (429)
T PRK06173 402 MPPFIISPDELSQLTSGLLRVL 423 (429)
T ss_pred eCCccCCHHHHHHHHHHHHHHH
Confidence 9 5679999999999999876
No 276
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=6.1e-15 Score=144.02 Aligned_cols=351 Identities=10% Similarity=0.040 Sum_probs=204.0
Q ss_pred HHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.. . -..+|.+.+++.+++.+.. .....|... +....+++.|.+..+...+.
T Consensus 42 ~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~--~~~~~~~~~----~~~~~lae~L~~~~p~~~~~ 115 (457)
T PRK05639 42 GFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ--HSMIGYTHS----ERAIRVAEKLAEISPIENPK 115 (457)
T ss_pred eecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcc--ccccCccCC----HHHHHHHHHHHhhCCCCcCE
Confidence 4444455667788999977742 2 2367899999999987542 111123222 33334444443322433468
Q ss_pred EEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCccCC--c-----
Q 045431 129 IFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAENG--F----- 196 (433)
Q Consensus 129 i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~--~----- 196 (433)
+++++++++|... + ........+|+..+.+|++.......+ +..... ..++....++..+|...... +
T Consensus 116 v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 195 (457)
T PRK05639 116 VLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGY 195 (457)
T ss_pred EEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccccccc
Confidence 9999999999886 3 222344567888888888865433332 211100 00111112344444321100 0
Q ss_pred -cc---------CCCC--------CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 197 -FP---------DLST--------VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 197 -~~---------~~~~--------~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.. .++. ..++.+|++ .| +...|. ..+.+.+++|.++|++||+++|.||++..|...|..
T Consensus 196 ~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~-EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 274 (457)
T PRK05639 196 EEPDELINRFLDYLENYVFSHVVPPDEVAALFA-EPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKW 274 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchH
Confidence 00 0111 234555554 56 555676 457889999999999999999999999976554432
Q ss_pred CcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChh
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFK 336 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 336 (433)
.....++-.+| ++ +|+|.++ .|+.+|.+++++++. + +.......+.+.++++.+++.+.|+....
T Consensus 275 ~a~~~~gv~PD-iv---~~gK~l~-gG~pi~av~~~~~i~--------~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~- 339 (457)
T PRK05639 275 FASEWFEVKPD-LI---IFGKGVA-SGMGLSGVIGRKELM--------D-LTSGSALLTPAANPVISAAAEATLEIIEE- 339 (457)
T ss_pred HHHHhcCCCCC-EE---Eechhhc-CCCcceeEEehHHHH--------h-hcCCCcccCCCcCHHHHHHHHHHHHHHHH-
Confidence 22222222344 33 3899998 899999999998885 2 11111223455778888878877763222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc----CCee-ecCCCccEEEEECCC-C---C---hHHHHHHHHHcCCeEecCCCCCCC
Q 045431 337 AVHEVIGFYKENTDIIVETFNSL----GFKV-YGGKNAPYVWVQFPG-R---S---SWDVFSEILEKTHVVTTPGSGFGP 404 (433)
Q Consensus 337 ~~~~~~~~~~~~~~~l~~~l~~~----g~~~-~~~~~g~~~~~~~~~-~---~---~~~~~~~l~~~~gi~v~~g~~f~~ 404 (433)
++..+..+++.+++.+.|+++ ++.. +. ..|.++.+.+.. . + ...+...++ ++|+.+.+..
T Consensus 340 --~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~Vr-G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g---- 411 (457)
T PRK05639 340 --ENLLKNALKVGEFIKKRLLEMKESFEVIGDVR-GKGLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYG---- 411 (457)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHhCCCEEeec-cceeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecC----
Confidence 234455555666666666553 3211 22 245666666531 1 1 223444555 4599997641
Q ss_pred CCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 405 GGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 405 ~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
...+.+|+. +..+++++++++++|.+++
T Consensus 412 ~~~~~lr~~Ppl~it~~~id~~~~~l~~~l 441 (457)
T PRK05639 412 MFGNVIRITPPLVITKEIAEKGLEIMERAI 441 (457)
T ss_pred CCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 124689999 4669999999999999876
No 277
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=2e-16 Score=134.42 Aligned_cols=160 Identities=16% Similarity=0.114 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhh-hhHHHhCCcccccccccccceE
Q 045431 108 KPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYV-DSSVIMGQTGEFQKDAEKYGKI 185 (433)
Q Consensus 108 ~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~ 185 (433)
.++++.+++++ +.+++++++++|+++++.+ +..+..++++|++++++|++.. ......| .++
T Consensus 3 ~~~~~~l~~~~----~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g------------~~~ 66 (170)
T cd01494 3 EELEEKLARLL----QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAG------------AKP 66 (170)
T ss_pred HHHHHHHHHHc----CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcC------------CEE
Confidence 57889999987 4678899999999999998 5666788999999999999988 6666666 467
Q ss_pred EEeecCccCCcccC---C---CCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc
Q 045431 186 EYMRCTAENGFFPD---L---STVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI 259 (433)
Q Consensus 186 ~~~~~~~~~~~~~~---~---~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 259 (433)
..++.+.......+ + ...++++++++++|+||+|..++. ++|.++|+++|+++|+|++|..+......
T Consensus 67 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~--- 140 (170)
T cd01494 67 VPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG--- 140 (170)
T ss_pred EEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc---
Confidence 77776654332221 1 124678899999999999998884 88888899999999999999976654321
Q ss_pred cccCCCCcceEEEecccccccccccceeeeecc
Q 045431 260 FEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 260 ~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
..... .+..+++.|++|.++ + .++|+++++
T Consensus 141 ~~~~~-~~~d~~~~s~~K~~~-~-~~~G~l~~~ 170 (170)
T cd01494 141 VLIPE-GGADVVTFSLHKNLG-G-EGGGVVIVK 170 (170)
T ss_pred ccccc-ccCCEEEEEcccccC-C-CceEEEEeC
Confidence 11111 234588899999997 3 679998763
No 278
>PRK05965 hypothetical protein; Provisional
Probab=99.72 E-value=2e-15 Score=147.84 Aligned_cols=351 Identities=11% Similarity=0.092 Sum_probs=205.0
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.. .+ ..+|++.+++.+++.+.......+.+ ..+.+..+|+.|....+.+.+.
T Consensus 35 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~~ 109 (459)
T PRK05965 35 AKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHF-----GSEPAIRLAAKLAERAPGSLNH 109 (459)
T ss_pred eeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccccccc-----CCHHHHHHHHHHHhhCCCCcCE
Confidence 3344445566778999976643 22 35789999999998764210111122 1233344555554322334578
Q ss_pred EEEcCChHHHHHH-HH---Hhc---C-C-CCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCc------
Q 045431 129 IFVSDGAKCDISR-LQ---IVF---G-S-NVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTA------ 192 (433)
Q Consensus 129 i~~~~G~~~al~~-l~---~l~---~-~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~------ 192 (433)
+++++++++|++. +. ... . + ..+|+..+.+|++.............+ ..++.....+..++...
T Consensus 110 v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (459)
T PRK05965 110 VYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPV 189 (459)
T ss_pred EEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccccc
Confidence 9999999999885 42 111 1 2 357888999998865332222211111 11111111122222211
Q ss_pred cCCcc-------cCC----CC--CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 193 ENGFF-------PDL----ST--VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 193 ~~~~~-------~~~----~~--~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
.++.. ..+ +. ..++.+|++ .| +...|+ ..+++.++++.++|++||+++|.||+...|...|...
T Consensus 190 ~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIv-EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~ 268 (459)
T PRK05965 190 GDDPQAIIAASVAALRAKVAELGADNVAAFFC-EPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF 268 (459)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEE-eccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh
Confidence 00100 011 11 134555554 55 555676 4578899999999999999999999999886665543
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHHHh
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGLAC 329 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~ 329 (433)
....+.-.+| ++ +++|.++ .| +.+|.+++++++. +.+.. +...++++.++++.+++.+.
T Consensus 269 a~~~~gv~PD-iv---~~gKgl~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~ 335 (459)
T PRK05965 269 ACEAEGVVPD-LM---TVAKGLT-SGYVPMGAVLMSDHVY--------QGIADGAGAAAPVGHGYTYSAHPVSAAVGLEV 335 (459)
T ss_pred hHhhcCCCCC-eE---Eechhhc-cCCcceeEEEEcHHHH--------HHHhccccccccccccCCCCCCHHHHHHHHHH
Confidence 3333333345 33 5799998 88 5999999998874 33321 23445667889998888888
Q ss_pred cCcCChhHHHHHHHHHHHHHHHHHHHHhhc---C-CeeecCCCccEEEEECCC-C------C-----hHHHHHHHHHcCC
Q 045431 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSL---G-FKVYGGKNAPYVWVQFPG-R------S-----SWDVFSEILEKTH 393 (433)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g-~~~~~~~~g~~~~~~~~~-~------~-----~~~~~~~l~~~~g 393 (433)
|+-... +++.++.++.-+++.+.|+++ . +.-+. ..|+++-+.+.. . + ...+...++ ++|
T Consensus 336 L~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~G 410 (459)
T PRK05965 336 LRLYHE---GGLLANGQKAGPRFAAGLDALRAHPLVGDVR-GRGLLGALELVADKATKTPFDAALDPADRIFDRAY-ANG 410 (459)
T ss_pred HHHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEe-ecceEEEEEEeccccccCCCCchhHHHHHHHHHHH-hCC
Confidence 763221 334555666666666666654 1 11122 245555565531 0 0 123444444 559
Q ss_pred eEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 394 VVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 394 i~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|.+.+. +.+.+|++ +..+++++++++++|.+++
T Consensus 411 ll~~~~------g~~~i~~~PpL~it~~ei~~~~~~l~~~l 445 (459)
T PRK05965 411 LVFRAF------GDGVLGFAPALCCTEGEFDLIFERTRKTL 445 (459)
T ss_pred eEEEec------CCcEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 999752 24678988 5679999999999998876
No 279
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.72 E-value=2.1e-15 Score=145.99 Aligned_cols=349 Identities=9% Similarity=0.027 Sum_probs=201.9
Q ss_pred HHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
++......+++..+|+..|.- . -..+|.+.+++.+++.+... .....+ ..+.+..+|+.|.+..+.+.+.+
T Consensus 33 ~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~-~~~~~~-----~~~~~~~la~~L~~~~p~~~~~v 106 (428)
T PRK07986 33 EGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH-VMFGGI-----THPPAIELCRKLVAMTPQPLECV 106 (428)
T ss_pred eeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCC-cccccc-----CCHHHHHHHHHHHhhCCCCcCEE
Confidence 333344556778999977642 2 24678999999999876421 111111 12445556666544233334789
Q ss_pred EEcCChHHHHHH-HH--Hhc-----CCCCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCccC---Cc
Q 045431 130 FVSDGAKCDISR-LQ--IVF-----GSNVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAEN---GF 196 (433)
Q Consensus 130 ~~~~G~~~al~~-l~--~l~-----~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~---~~ 196 (433)
++++++++|... +. ... ....+|+..+.+|++.......+ +....+ ..+......+..++..... .+
T Consensus 107 ~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 186 (428)
T PRK07986 107 FLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEW 186 (428)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhh
Confidence 999999999885 31 111 22467899999998754322222 211000 0011111112222221100 00
Q ss_pred ----ccCC----CCC-CCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC
Q 045431 197 ----FPDL----STV-ARTDIIFFCSP--NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG 264 (433)
Q Consensus 197 ----~~~~----~~~-~~~~~i~l~~p--~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 264 (433)
..++ +.. .++.+ ++..| +.-.|+ ..+++.+++|.++|++||+++|.||++..+...|.......+.-
T Consensus 187 ~~~d~~~l~~~l~~~~~~iaa-vi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv 265 (428)
T PRK07986 187 DERDIAPFARLMAAHRHEIAA-VILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI 265 (428)
T ss_pred HHHHHHHHHHHHHhCCCcEEE-EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC
Confidence 0011 111 23444 44455 455565 44678999999999999999999999987644443322222222
Q ss_pred CCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-----HHhhccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 265 AKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-----IVCTCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 265 ~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
.+| ++ +++|.++ .| +.+|.+++++++. +.+.. +....+.+.++++.+++.+.|+....
T Consensus 266 ~PD-i~---t~gK~l~-gG~~p~~av~~~~~i~--------~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~--- 329 (428)
T PRK07986 266 APD-IL---CLGKALT-GGTMTLSATLTTREVA--------ETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES--- 329 (428)
T ss_pred CCC-EE---Eechhhh-CCcccCcchhchHHHH--------HHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---
Confidence 234 23 5899997 88 5899999888874 33432 12334555788888888877763221
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCe---eecCCCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe
Q 045431 339 HEVIGFYKENTDIIVETFNSL-GFK---VYGGKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS 413 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~-g~~---~~~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~ 413 (433)
+++.++.+++.+++.+.|+++ ... -+.. .|.++-+.+.. .....+...++ ++||.+.+. + +.+|++
T Consensus 330 ~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg-~Gl~~~ve~~~~~~~~~~~~~l~-~~Gl~~~~~------g-~~i~~~ 400 (428)
T PRK07986 330 GDWQQQVAAIEAQLREELAPLRDAPMVADVRV-LGAIGVVETTRPVNMAALQRFFV-EQGVWIRPF------G-KLIYLM 400 (428)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEec-cceEEEEEeCCcccHHHHHHHHH-HCCcEEEec------C-CEEEEe
Confidence 234556666666666666654 221 1221 35666666653 23345555554 559999763 1 479997
Q ss_pred --eccChhHHHHHHHHHHHhhC
Q 045431 414 --AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 414 --~~~~~~~l~~~l~~l~~~l~ 433 (433)
+..+++++++++++|.++++
T Consensus 401 Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 401 PPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred CCCCCCHHHHHHHHHHHHHHHh
Confidence 67899999999999998763
No 280
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=6e-15 Score=143.24 Aligned_cols=155 Identities=17% Similarity=0.238 Sum_probs=109.8
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh----HHHhCCccccccccc
Q 045431 106 GEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDAE 180 (433)
Q Consensus 106 g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~ 180 (433)
-..+|++.+|++. +.+ ..++++++++++.+ +..++++||+|+++.++|.+.... +...|
T Consensus 64 ~~~~le~~lA~l~----g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G---------- 127 (427)
T PRK05994 64 TNAVLEERVAALE----GGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFG---------- 127 (427)
T ss_pred cHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcC----------
Confidence 4577888888885 443 46677777777776 677899999999999999875443 34445
Q ss_pred ccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc
Q 045431 181 KYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 260 (433)
..++.++.++...+...+ .+++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..++
T Consensus 128 --~~v~~vd~~d~~~l~~ai--~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~---~~pl- 196 (427)
T PRK05994 128 --WQVRWADADDPASFERAI--TPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL---IRPI- 196 (427)
T ss_pred --cEEEEECCCCHHHHHHhc--CcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc---CCcc-
Confidence 366666653211221111 357899999999999999998 78999999999999999999974211 1122
Q ss_pred ccCCCCcceEEEecccccccccccceeeeec
Q 045431 261 EIPGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
.+ +-.+++.|++|.+|-+|-.+|.+++
T Consensus 197 ~~----gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 197 EH----GADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred cc----CCcEEEEcCccccCCCCCcEEEEEE
Confidence 11 1238899999999855655776555
No 281
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.71 E-value=4.7e-15 Score=144.89 Aligned_cols=345 Identities=12% Similarity=0.095 Sum_probs=197.8
Q ss_pred HHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
++....+.+++..||+..|... + ..+|.+.+++.+++.+.. .++. ..++...+|+.+.+..+. .+.+
T Consensus 89 ~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~------~~~~---~~~~~~~lAe~l~~~~p~-~~~v 158 (474)
T PLN02482 89 KGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT------SFGA---PCLLENVLAEMVIDAVPS-VEMV 158 (474)
T ss_pred eeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC------CCCC---CCHHHHHHHHHHHHhCCC-CCEE
Confidence 3344455667889999766532 2 367899999999997531 1211 224555666666543332 5799
Q ss_pred EEcCChHHHHHHHHHh---cCCCCEEEEeCCCChhhhhhHHHhCCccc--c---ccccc---ccceEEEeecCccCCccc
Q 045431 130 FVSDGAKCDISRLQIV---FGSNVTMAVQDPSYPAYVDSSVIMGQTGE--F---QKDAE---KYGKIEYMRCTAENGFFP 198 (433)
Q Consensus 130 ~~~~G~~~al~~l~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~--~---~~~~~---~~~~~~~~~~~~~~~~~~ 198 (433)
.+++++++|......+ ....++|+..+-+|++....+......+. . ...+. ....+..++.++.+.+..
T Consensus 159 ~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~ 238 (474)
T PLN02482 159 RFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKK 238 (474)
T ss_pred EEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHH
Confidence 9999999998863222 33457888888889886533211100000 0 00000 001223334322111111
Q ss_pred CCCCC-CCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecc
Q 045431 199 DLSTV-ARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSF 275 (433)
Q Consensus 199 ~~~~~-~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 275 (433)
.++.. .++.+ ++..| ..-.|.+. +++.+++|.++|++||+++|.||++..+ ..+.......+.-.+| +.+|
T Consensus 239 ~l~~~~~~iAa-vI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PD----i~t~ 312 (474)
T PLN02482 239 LFEANKGEIAA-VILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPD----LTTL 312 (474)
T ss_pred HHHhCCCceEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCC----EEEe
Confidence 12211 23444 44556 55567655 4788999999999999999999999876 3332211111222244 3478
Q ss_pred cccccccccceeeeeccccccccCCcchhHHHH---HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHH
Q 045431 276 SKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN---RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDII 352 (433)
Q Consensus 276 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 352 (433)
+|.+| .|+.+|.++++++++ +.+. ......+.+.++++.+++.+.|+.... +...++++++.+++
T Consensus 313 gK~lg-gG~Pigav~g~~ei~--------~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l 380 (474)
T PLN02482 313 GKVIG-GGLPVGAYGGRREIM--------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKL 380 (474)
T ss_pred cchhh-CCCceEEEEEcHHHH--------HhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHH
Confidence 99998 899999999988875 3332 122334445678888877777663221 23455555566666
Q ss_pred HHHHhhc----CCeee-cCCCccEEEEECC--C---------CC---hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe
Q 045431 353 VETFNSL----GFKVY-GGKNAPYVWVQFP--G---------RS---SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS 413 (433)
Q Consensus 353 ~~~l~~~----g~~~~-~~~~g~~~~~~~~--~---------~~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~ 413 (433)
.+.|++. ++.+. ..-++++ .+.+. . .+ ...+...+++ +||.+.|... + .++ ++
T Consensus 381 ~~~L~~l~~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~--~--~~~--ps 452 (474)
T PLN02482 381 IQGILEAGKKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQF--E--AGF--TS 452 (474)
T ss_pred HHHHHHHHHhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCC--C--CCc--CC
Confidence 6666543 44443 2224433 22221 1 01 1234555554 5999977321 1 111 56
Q ss_pred eccChhHHHHHHHHHHHhhC
Q 045431 414 AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 414 ~~~~~~~l~~~l~~l~~~l~ 433 (433)
+..+++||+++++++.++++
T Consensus 453 l~ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 453 LAHTEEDIDFTIAAAERVLA 472 (474)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 77899999999999998763
No 282
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=9e-15 Score=141.74 Aligned_cols=159 Identities=14% Similarity=0.203 Sum_probs=114.4
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH-hCCccccccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEFQKDAEKY 182 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~ 182 (433)
+-..+|++.+|++. +.. ..++++++++|+.+ +..++++||+|+++...|.+....+.. +...|
T Consensus 64 p~~~~le~~lA~l~----g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~G--------- 128 (433)
T PRK08134 64 PTVAVLEERVAALE----GGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFG--------- 128 (433)
T ss_pred hHHHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCC---------
Confidence 34788899999886 543 46889999999987 677899999999999999876555432 11112
Q ss_pred ceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccccc
Q 045431 183 GKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEI 262 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~ 262 (433)
++++.++.++...+...+ .+++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|.+++.-.. ..++ .+
T Consensus 129 i~v~~vd~~d~~~l~~~i--~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~---~~pl-~~ 199 (433)
T PRK08134 129 IETTFVKPGDIDGWRAAI--RPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL---LRPF-EH 199 (433)
T ss_pred eEEEEECCCCHHHHHHhc--CCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc---CCch-hc
Confidence 367777764211211111 368999999999999999998 88899999999999999999874221 1222 22
Q ss_pred CCCCcceEEEecccccccccccceeeeec
Q 045431 263 PGAKEVAIETSSFSKYAGFTGVRLGWTVI 291 (433)
Q Consensus 263 ~~~~~~vi~i~S~sK~~~~~G~r~G~l~~ 291 (433)
+..+++.|.+|.++.+|-.+|.+++
T Consensus 200 ----GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 200 ----GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred ----CCCEEEeccccccCCCCCceEEEEE
Confidence 2248899999999866766776654
No 283
>PRK07482 hypothetical protein; Provisional
Probab=99.71 E-value=1.2e-14 Score=142.48 Aligned_cols=353 Identities=10% Similarity=0.025 Sum_probs=205.5
Q ss_pred HHHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+.++......+++..||+..|... + ..+|.+.+++.+++.+.........+ ..+.+..+|+.|.+..+.+.+
T Consensus 38 ~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~-----~~~~~~~lAe~L~~~~p~~~~ 112 (461)
T PRK07482 38 GGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGH-----GTEASITLSKRIIDRAPAGMS 112 (461)
T ss_pred eeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcccccccc-----CCHHHHHHHHHHHHhCCCCcC
Confidence 344444555677889999877532 2 36899999999999764210111122 234455566655442333457
Q ss_pred cEEEcCChHHHHHHHHHhc-------C-C-CCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCcc-C--
Q 045431 128 DIFVSDGAKCDISRLQIVF-------G-S-NVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAE-N-- 194 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l~-------~-~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~-- 194 (433)
.+++++++++|+.....+. . + ..+|+..+.+|++.......+.....+ ..++.....+..++.... .
T Consensus 113 ~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 192 (461)
T PRK07482 113 KVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRA 192 (461)
T ss_pred EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCcccccc
Confidence 8999999999998632221 1 1 357888888898854322222211100 001111112222221110 0
Q ss_pred --C-----c----ccC----CCC--CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 195 --G-----F----FPD----LST--VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 195 --~-----~----~~~----~~~--~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
+ + ... ++. .+++.+|+ ..| +...|+. .+++.+++|.++|++||+++|.||++..|...+.
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi-~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~ 271 (461)
T PRK07482 193 DAGMSEEQFSAYCADELEELILAEGPDTIAAFI-AEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271 (461)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc
Confidence 0 0 000 111 13455544 456 5555766 5788999999999999999999999998866654
Q ss_pred CCcccccCCCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHH-------HHHhhccCCCcHHHHHHHH
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFN-------RIVCTCFNGASNISQAGGL 327 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~q~~~~ 327 (433)
......++-.+| ++ +++|.++ .|. .+|.+++++++. +.+. .+...++.+.++++.+++.
T Consensus 272 ~~a~~~~gv~PD-iv---~~gKgl~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~ 338 (461)
T PRK07482 272 MFGSDHYGIEPD-LI---TVAKGLT-SAYAPLSGSIVGEKVW--------DVLEQGSDEHGAIGHGWTYSGHPICAAAAL 338 (461)
T ss_pred hhhHHhcCCCCC-EE---EEccccc-cCccccceeeecHHHH--------HHHhcccccCCccccCCCCCcCHHHHHHHH
Confidence 333333333345 33 5799997 885 899999888763 3332 1124456668899999888
Q ss_pred HhcCcCChhHHHHHHHHHHHHHHHHHHHHhh----cCCe-eecCCCccEEEEECCC-C------C-----hHHHHHHHHH
Q 045431 328 ACLSPEGFKAVHEVIGFYKENTDIIVETFNS----LGFK-VYGGKNAPYVWVQFPG-R------S-----SWDVFSEILE 390 (433)
Q Consensus 328 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~-~~~~~~g~~~~~~~~~-~------~-----~~~~~~~l~~ 390 (433)
+.|+.... ++..++.++..+++.+.|++ +++. -+. ..|.++.+.+.. . + ...+...++
T Consensus 339 a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr-G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~- 413 (461)
T PRK07482 339 ANLDILER---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVR-GVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL- 413 (461)
T ss_pred HHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe-eceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH-
Confidence 88763222 23344455555666666654 3321 122 245666666641 1 0 123445555
Q ss_pred cCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 391 KTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 391 ~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
++||.+.++. ..+.+|+. +..+++++++++++|.+++
T Consensus 414 ~~Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l 452 (461)
T PRK07482 414 ERGVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAV 452 (461)
T ss_pred HCCcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 4599986521 13578887 5679999999999998876
No 284
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.71 E-value=2.7e-15 Score=146.25 Aligned_cols=349 Identities=13% Similarity=0.160 Sum_probs=202.4
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.- .+ ..+|.+.+++.+++.+... .....+. .+....+++.|....+...+.
T Consensus 38 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~~-----~~~~~~la~~L~~~~p~~~~~ 111 (445)
T PRK09221 38 AEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDY-APAFQMG-----HPLAFELAERLAELAPGGLDH 111 (445)
T ss_pred ccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccC-ccccccC-----CHHHHHHHHHHHHhCCCCCCE
Confidence 3444445566778999977642 22 3678899999999876421 1111221 233344555554322323468
Q ss_pred EEEcCChHHHHHHHHHh---c----C-C-CCEEEEeCCCChhhhhhHHHhC-CcccccccccccceEEEeecCc---cCC
Q 045431 129 IFVSDGAKCDISRLQIV---F----G-S-NVTMAVQDPSYPAYVDSSVIMG-QTGEFQKDAEKYGKIEYMRCTA---ENG 195 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l---~----~-~-gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~---~~~ 195 (433)
|++++++++++.....+ . . + ..+|+....+|++........+ .......++.....+..++... ...
T Consensus 112 v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK09221 112 VFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENA 191 (445)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccc
Confidence 99999999998863221 1 1 1 3578888889987643322222 1111111111111222333211 000
Q ss_pred c-----------ccCCC----CC--CCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 196 F-----------FPDLS----TV--ARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 196 ~-----------~~~~~----~~--~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
+ ..+++ .. .++.+|+ ..| +...|.. .+.+.+++|.++|++||+++|.||++..|...|..
T Consensus 192 ~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi-~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 270 (445)
T PRK09221 192 FSKGQPEHGAELADDLERLVALHDASTIAAVI-VEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAA 270 (445)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCcEEEEE-EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchh
Confidence 0 00111 11 2444544 455 5556764 46788999999999999999999999876554443
Q ss_pred CcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHHH
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGLA 328 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~ 328 (433)
.....+.-.+| +-+++|.++ .| +.+|.++++++++ +.+.. +....+.+.++++.+++.+
T Consensus 271 ~~~~~~gv~PD----i~~~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a 337 (445)
T PRK09221 271 FAAERFGVTPD----IITFAKGLT-NGAIPMGAVIASDEIY--------DAFMQGPEYAIEFFHGYTYSAHPVACAAGLA 337 (445)
T ss_pred hHHHhcCCCCC----EEEeccccc-cCcccceeeEEcHHHH--------HhhccCcccccccccccCCCcCHHHHHHHHH
Confidence 22222322244 347899997 66 6899999988774 22211 1233455578888887777
Q ss_pred hcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCee---ecCCCccEEEEECCC--C----ChHHHHHHHHHcCCeEecC
Q 045431 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKV---YGGKNAPYVWVQFPG--R----SSWDVFSEILEKTHVVTTP 398 (433)
Q Consensus 329 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~---~~~~~g~~~~~~~~~--~----~~~~~~~~l~~~~gi~v~~ 398 (433)
.|+.... +.+.++.++..+++.+.|+++ +... +.. .|.+.-+.+.. . ....+...+++ +||.+.+
T Consensus 338 ~L~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg-~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~ 412 (445)
T PRK09221 338 TLDIYRE---EDLFERAAELAPYFEDAVHSLKGLPHVIDIRN-IGLVAGIELAPRPGAPGARGYEAFMKCFE-KGLLVRY 412 (445)
T ss_pred HHHHHHh---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEec-CceEEEEEEecccccccchHHHHHHHHHH-CCeEEee
Confidence 7763211 244566777777777777765 2221 221 34455555531 1 12345555554 5999975
Q ss_pred CCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 399 GSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 399 g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+ .+.+||+ +..+++++++++++|.+++
T Consensus 413 ~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l 441 (445)
T PRK09221 413 T-------GDTIALSPPLIIEKAQIDELVDALGDAL 441 (445)
T ss_pred c-------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 3 2579999 5679999999999999876
No 285
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.70 E-value=3.4e-15 Score=155.07 Aligned_cols=337 Identities=11% Similarity=0.044 Sum_probs=212.8
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC---CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChH---
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA---EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAK--- 136 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~--- 136 (433)
..+|.|++..+.+.+-....-+-...+ ..++-|.| .+|+.++-..+.+++++-++. ++|.++++++
T Consensus 525 ~~~~plgsctmk~n~~~~~~~~~~~~~------~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~g 596 (993)
T PLN02414 525 HSMIPLGSCTMKLNATTEMMPVTWPEF------ANIHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAG 596 (993)
T ss_pred cCCccCcccccccCchhhhhhhcCcch------hhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHH
Confidence 356777777765433222111111111 22333333 356555555555555443365 8999999998
Q ss_pred -HHHHH-HHHhcCC-CC----EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--C---
Q 045431 137 -CDISR-LQIVFGS-NV----TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--V--- 203 (433)
Q Consensus 137 -~al~~-l~~l~~~-gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~--- 203 (433)
.++.+ +..++++ || .|+++...|......+...| .+++.++.+.++..+.+ +++ .
T Consensus 597 e~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G------------~~vv~v~~d~~G~vDle~L~~~i~~~~ 664 (993)
T PLN02414 597 EYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCG------------MKIVVVGTDAKGNINIEELRKAAEAHK 664 (993)
T ss_pred HHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCC------------CEEEEeccCCCCCcCHHHHHHHHhccC
Confidence 66665 6777865 88 89999999999888888877 58999998765443332 221 1
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc---
Q 045431 204 ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG--- 280 (433)
Q Consensus 204 ~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~--- 280 (433)
+++++|++++|+|-+|...+ +++|+++|+++|+++++|.++.--... .....++ +..++.+|.+|+|+
T Consensus 665 ~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~~--l~~p~~~----GaD~~~~s~HK~f~~P~ 735 (993)
T PLN02414 665 DNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQVG--LTSPGFI----GADVCHLNLHKTFCIPH 735 (993)
T ss_pred CCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHhccC--cCCcccc----CCCEEEecCCccCCcCc
Confidence 36889999999999998755 899999999999999999998631101 1111222 23488999999775
Q ss_pred -ccccceeeeeccccccccCCcchh-H---HHHHHHhhccCC------CcHHHHHHHHHhcCcCChhHHHHHHHHHHHHH
Q 045431 281 -FTGVRLGWTVIPKELLFSDGFPVA-K---DFNRIVCTCFNG------ASNISQAGGLACLSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 281 -~~G~r~G~l~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (433)
.+|-.+|++.+.+.+...--.... . ...+........ .+.....++..++...+.+.+++..++...+.
T Consensus 736 G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nA 815 (993)
T PLN02414 736 GGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNA 815 (993)
T ss_pred ccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHH
Confidence 234458999998877521110000 0 011111111111 12244445566666666677888889999999
Q ss_pred HHHHHHHhhc-CCeeecCCCccE--EEEECC------CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccCh
Q 045431 350 DIIVETFNSL-GFKVYGGKNAPY--VWVQFP------GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHR 418 (433)
Q Consensus 350 ~~l~~~l~~~-g~~~~~~~~g~~--~~~~~~------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~ 418 (433)
+++.+.|++. ++.+..+.+..+ +.++++ +.+..++.++|+ ++||..-. ..| + ..+++|++. +.+.
T Consensus 816 nYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt-~~~-p-v~~~lmiepTE~~sk 891 (993)
T PLN02414 816 NYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPT-MSW-P-VPGTLMIEPTESESK 891 (993)
T ss_pred HHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEee-ecc-c-cCCEEEEEeeeeCCH
Confidence 9999999774 555544333211 234443 245577888887 66997643 334 2 367899995 6689
Q ss_pred hHHHHHHHHHHHhh
Q 045431 419 GNVLEACKRFKHLY 432 (433)
Q Consensus 419 ~~l~~~l~~l~~~l 432 (433)
+||++.+++|+++.
T Consensus 892 eelDrf~~al~~i~ 905 (993)
T PLN02414 892 AELDRFCDALISIR 905 (993)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 286
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.70 E-value=4.3e-15 Score=144.77 Aligned_cols=349 Identities=12% Similarity=0.098 Sum_probs=200.0
Q ss_pred HHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
.+......++...||+..|.. . -..+|.+.+++.+++.+... .....+ ..+....+|+.+.+..+...+.+
T Consensus 36 ~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~-----~~~~~~~la~~l~~~~p~~~~~v 109 (442)
T PRK13360 36 KGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDY-APAFQM-----GHPKAFELANRIAEIAPGGLNHV 109 (442)
T ss_pred eeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCC-cccCCc-----CCHHHHHHHHHHHHhCCCCCCEE
Confidence 333344556778999976642 2 24688999999999876421 111112 12334455555543223234689
Q ss_pred EEcCChHHHHHHHHHh---c-----CC-CCEEEEeCCCChhhhhhH-HHhCCcccccccccccceEEEeecCcc---CCc
Q 045431 130 FVSDGAKCDISRLQIV---F-----GS-NVTMAVQDPSYPAYVDSS-VIMGQTGEFQKDAEKYGKIEYMRCTAE---NGF 196 (433)
Q Consensus 130 ~~~~G~~~al~~l~~l---~-----~~-gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~ 196 (433)
++++++++|+.....+ . ++ ..+|+....+|++..... ...|.......++.....+..+|.... ..+
T Consensus 110 ~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 189 (442)
T PRK13360 110 FFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAF 189 (442)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhcccc
Confidence 9999999998853221 1 12 357998998998864322 222211111111111112233332210 000
Q ss_pred c-----------cCCCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 197 F-----------PDLST------VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 197 ~-----------~~~~~------~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
. .++++ ..++.+ +++.| +...|.. .+.+.+++|.++|++||+++|.||++..+...|...
T Consensus 190 ~~~~~~~~~~~~~~le~~l~~~~~~~~aa-vivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~ 268 (442)
T PRK13360 190 SKGQPEHGAELADELERLVTLHDASTIAA-VIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF 268 (442)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCcEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch
Confidence 0 01111 123444 44566 5555665 578899999999999999999999998775544432
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHHHh
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGLAC 329 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~ 329 (433)
....++-.+| +-+|+|.++ .| +.+|.+++++++. +.+.. +....+.+.++++.+++.+.
T Consensus 269 a~~~~gv~PD----ivt~gK~l~-gG~~P~gav~~~~~i~--------~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~ 335 (442)
T PRK13360 269 AAQYFGVTPD----LLTCAKGLT-NGAIPMGAVFVSSEIH--------DAFMQGPEAGIEFFHGYTYSGHPLACAAALAT 335 (442)
T ss_pred hhhhcCCCCc----eeeeeeccc-cCccceEEEEEcHHHH--------HHhhcCCccccccccCCCCCCCHHHHHHHHHH
Confidence 2222222244 237899997 67 7899999988874 22221 12334555788888888887
Q ss_pred cCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-CeeecC--CCccEEEEECCC------CChHHHHHHHHHcCCeEecCCC
Q 045431 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSLG-FKVYGG--KNAPYVWVQFPG------RSSWDVFSEILEKTHVVTTPGS 400 (433)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~--~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~ 400 (433)
|+.... +.+.++.+++.+++.+.|+++. ...+.. ..|++.-+.+.. ....++...+++ +||.+.++
T Consensus 336 L~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~- 410 (442)
T PRK13360 336 LDLYER---EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFE-KGLMIRYT- 410 (442)
T ss_pred HHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHH-CCcEEEec-
Confidence 763211 2345666667777777776541 211111 124443444421 112355666555 59999753
Q ss_pred CCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 401 GFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 401 ~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
.+.+||+ +..+++++++++++|.+++
T Consensus 411 ------~~~lr~~Ppl~~t~~eid~~~~~l~~~l 438 (442)
T PRK13360 411 ------GDILALSPPLIIEEAQIDELFDILAQAL 438 (442)
T ss_pred ------CCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 2479999 5679999999999998876
No 287
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=1.3e-14 Score=141.91 Aligned_cols=349 Identities=13% Similarity=0.110 Sum_probs=192.5
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHH-hhcccCCCCCCC-CCCCCCHHHHHHHHHHHhccCCCCCCcEEE----cCChHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRS-YALSTQEGYSGY-GAEQGEKPLRAAIASTFYKDLGIEEGDIFV----SDGAKC 137 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~Y-~~~~g~~~lr~~la~~l~~~~~~~~~~i~~----~~G~~~ 137 (433)
..|+|--+++ ..++.+.+++...+ .++........| +-.....++.+...+...+.++...+.+.+ .+|+++
T Consensus 35 ~~l~liasen--~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~A 112 (475)
T PLN03226 35 KGLELIASEN--FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPA 112 (475)
T ss_pred cCeeEecCCc--cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHH
Confidence 3577766665 36788888888888 454422222233 222333333331111222344666655544 677777
Q ss_pred HHHHHHHhcCCCCEEEEeCCCChhhh-hhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C---CCCccEEE
Q 045431 138 DISRLQIVFGSNVTMAVQDPSYPAYV-DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T---VARTDIIF 210 (433)
Q Consensus 138 al~~l~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~i~ 210 (433)
.+.++.++++|||+|+..+....++. +.....|.+.- ....+.+...+.++.+++ ..+++ + ..++++|+
T Consensus 113 N~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s---~~~~~~~~~~y~~~~~~g-~iD~d~Le~~l~~~~pklIv 188 (475)
T PLN03226 113 NFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKIS---ATSIYFESMPYRLDESTG-LIDYDKLEKKAMLFRPKLII 188 (475)
T ss_pred HHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccc---cceEEEEeeeeeecCCCC-CcCHHHHHHHHhhcCCeEEE
Confidence 77778999999999998553222221 11111111000 000001233444443322 22322 1 24677655
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcccccCCCCcceEEEecccccccccccceee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN--PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
+ ..++ +|+..+ +++|.++|+++|+++++|++|........ +.++ + ...++++|++|++ .|.+-|+
T Consensus 189 ~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~---~---~~Div~~t~hK~L--~GP~Gg~ 255 (475)
T PLN03226 189 A-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPF---E---YCDVVTTTTHKSL--RGPRGGM 255 (475)
T ss_pred E-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC---C---CCeEEEecCcccc--cCCCceE
Confidence 4 3333 677666 66888999999999999999985333221 2222 1 2238899999998 2333488
Q ss_pred eeccccccccCCc------chhHHHHHHHhhccCCCcHHHHHHHH-HhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 045431 289 TVIPKELLFSDGF------PVAKDFNRIVCTCFNGASNISQAGGL-ACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGF 361 (433)
Q Consensus 289 l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 361 (433)
+++++..+..... .+...+.........+.+.+.+.+++ .+++.......+..++++.++.+++.+.|.+.|+
T Consensus 256 I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~ 335 (475)
T PLN03226 256 IFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGY 335 (475)
T ss_pred EEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8887764311000 00111111111112222333333333 3333111122366788999999999999999999
Q ss_pred eeecC-CCccEEEEECC--CCChHHHHHHHHHcCCeEecCCCCCC---CCCCCeEEEee------ccChhHHHHHHHHHH
Q 045431 362 KVYGG-KNAPYVWVQFP--GRSSWDVFSEILEKTHVVTTPGSGFG---PGGEGFIRVSA------FGHRGNVLEACKRFK 429 (433)
Q Consensus 362 ~~~~~-~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~------~~~~~~l~~~l~~l~ 429 (433)
.+..+ .....+++++. +.+..+ +...+++.||.+..+...+ +..+..+|++. ..+++++++..+.|.
T Consensus 336 ~l~~~~t~~hi~lv~~~~~gi~~~~-~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~ 414 (475)
T PLN03226 336 KLVTGGTDNHLVLWDLRPLGLTGSR-VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLH 414 (475)
T ss_pred EEEcCCCCCCEEEEEccCCCCCHHH-HHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHH
Confidence 98753 23566778884 334444 4455666799998764221 12345699962 336899999999888
Q ss_pred Hhh
Q 045431 430 HLY 432 (433)
Q Consensus 430 ~~l 432 (433)
+++
T Consensus 415 ~~~ 417 (475)
T PLN03226 415 RAV 417 (475)
T ss_pred HHH
Confidence 776
No 288
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.70 E-value=3.6e-15 Score=129.49 Aligned_cols=320 Identities=18% Similarity=0.191 Sum_probs=200.4
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQI 144 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~ 144 (433)
.+||-+-... -+-.++.+++.++.. +-.-|+.+.....|.+..|+.+ | ++.-++++||++..+-.+..
T Consensus 23 ~vDLRSDTvT-~PTdeMr~am~eA~v------gDdVyGeD~tt~rLE~~vA~l~----G-KEAgLFv~SGTmgNllaIm~ 90 (384)
T KOG1368|consen 23 SVDLRSDTVT-VPTDEMRRAMAEASV------GDDVYGEDPTTNRLEQRVAELF----G-KEAGLFVPSGTMGNLLAIMV 90 (384)
T ss_pred cccccccccc-CChHHHHHHHhhccc------CcccccCCccHHHHHHHHHHHh----C-ccceeeecccccccHHHHHH
Confidence 3555543322 233567777777653 3345777778899999999986 4 56789999999998887755
Q ss_pred hc-CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCC---CC----------CCCccEEE
Q 045431 145 VF-GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---ST----------VARTDIIF 210 (433)
Q Consensus 145 l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~~i~ 210 (433)
-| ++|..|++.+-+|--..+..-.... ..+...++.++.+-..++ +. .+.+++|+
T Consensus 91 Hc~~rg~eii~gd~~HI~~~E~gg~s~l-----------~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIc 159 (384)
T KOG1368|consen 91 HCHQRGSEIIVGDRAHIHRYEQGGISQL-----------AGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLIC 159 (384)
T ss_pred HhcCCCceEEeccchheeehhccChhhh-----------ccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEE
Confidence 55 6999999998877433222111111 123333333332222222 21 25689999
Q ss_pred EcCCCCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccccee-e
Q 045431 211 FCSPNNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLG-W 288 (433)
Q Consensus 211 l~~p~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G-~ 288 (433)
|-|-||-+| .++|.|++.++.+||++||+.+..|.+--+-..-....++..+-...|.| --++||.+|.| +| .
T Consensus 160 lENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSV--siCLSKglgAP---VGSV 234 (384)
T KOG1368|consen 160 LENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSV--SICLSKGLGAP---VGSV 234 (384)
T ss_pred eeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhh--hhhhhccCCCC---cccE
Confidence 988877666 99999999999999999999999998765322111234444443222322 22689998743 56 6
Q ss_pred eeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-CeeecC-
Q 045431 289 TVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG-FKVYGG- 366 (433)
Q Consensus 289 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~- 366 (433)
+++++.++.+ ...+++ .....+..+.+..++++-+|++. . ...+.-.++...+.+.++..+ +.+.-+
T Consensus 235 iVG~k~FI~k-----A~~~RK-alGGGmRQsGvLaaaaLval~~~-~----~~L~~dHk~A~~lAe~~~~~~~i~v~v~a 303 (384)
T KOG1368|consen 235 IVGSKDFIDK-----ARHFRK-ALGGGMRQSGVLAAAALVALDEN-V----PLLRADHKRAKELAEYINTPEEIRVEVPA 303 (384)
T ss_pred EEccHHHHHH-----HHHHHH-HhcCchhHHHHHHHHHHHHhhcc-h----HHHHHHHHHHHHHHHHhccccceeeecch
Confidence 7788888732 122222 22233334455555556566532 2 133445566667777777764 766444
Q ss_pred CCccEEEEECC--CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec--cChhHHHHHHHHHHH
Q 045431 367 KNAPYVWVQFP--GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF--GHRGNVLEACKRFKH 430 (433)
Q Consensus 367 ~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~l~~~l~~l~~ 430 (433)
...+++.+.+. ..+..++...+ +++||.+.+|.. ..+|+.+. .++++++..+..+.+
T Consensus 304 ~etNiv~~~l~q~~~~~~~l~~~~-~k~gi~lm~~~s------~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 304 VETNIVNMVLCQARLTAEELCKFL-EKNGILLMGGAS------RRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred hhcceeeeecccccCCHHHHHHHH-HHCCeEEeeccc------cceEEEEEEecCHHHHHHHHHHHHH
Confidence 45677776664 55666666665 566999988754 34899974 489999999988843
No 289
>PLN02271 serine hydroxymethyltransferase
Probab=99.70 E-value=1.6e-14 Score=139.39 Aligned_cols=345 Identities=13% Similarity=0.122 Sum_probs=208.1
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCC--CC-CCCCCCHHHHHHHHHHHhccCCCCC----CcEEEcCChH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYS--GY-GAEQGEKPLRAAIASTFYKDLGIEE----GDIFVSDGAK 136 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y-~~~~g~~~lr~~la~~l~~~~~~~~----~~i~~~~G~~ 136 (433)
.-|+|--+++ -..+.+.+++-..+.+... .++. .| +-.....++.....+...+.++++. .||..-+|+.
T Consensus 149 ~~l~LIASEN--~~S~av~~algS~ltnkYa-EG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~ 225 (586)
T PLN02271 149 KGIELIASEN--FVCRAVMEALGSHLTNKYS-EGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTS 225 (586)
T ss_pred cCeeeccccc--cCCHHHHHHhcCcccccCC-CCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHH
Confidence 3466655554 3567777777776654322 1211 33 2233334444333344334556655 6788888888
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCChhhhhhHH------HhCCcccccccccccceEEEeecCccCCcccCC---C---CCC
Q 045431 137 CDISRLQIVFGSNVTMAVQDPSYPAYVDSSV------IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL---S---TVA 204 (433)
Q Consensus 137 ~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~ 204 (433)
+.+.++.++++|||+|+..+..|.++..... .....++ +.+.++++++++.+ ..++ + ...
T Consensus 226 AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~-------~~~~vpY~~d~~~g-~IDyd~lek~a~~~ 297 (586)
T PLN02271 226 ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI-------FFESLPYKVNPQTG-YIDYDKLEEKALDF 297 (586)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccc-------eEEEEEcccccccC-ccCHHHHHHHhhhc
Confidence 8888889999999999999888887654321 1111111 13455555654322 2222 2 246
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCC-CCcccccCCCCcceEEEeccccccccc
Q 045431 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL-YISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 205 ~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~-~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
++|+|++..-.|| ..++ +++|.++|+++|+++++|.+|.. +...+. +.++. ...++.+|.+|++ .
T Consensus 298 rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~------~aDvvt~TTHKtL--r 364 (586)
T PLN02271 298 RPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD------YCDIVTSTTHKSL--R 364 (586)
T ss_pred CCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc------CCcEEEeCCcccC--C
Confidence 8998888666777 4455 77888889999999999999985 332221 22222 1238899999998 5
Q ss_pred ccceeeeecccccccc------------CCcchhHHHHHHHhhccCCCcHHHHHHHHHh-cCcCChhHHHHHHHHHHHHH
Q 045431 283 GVRLGWTVIPKELLFS------------DGFPVAKDFNRIVCTCFNGASNISQAGGLAC-LSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 283 G~r~G~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~-l~~~~~~~~~~~~~~~~~~~ 349 (433)
|-|-|+++.+++.... ..+.+.+++.........+.+.....|+++. +........+...+++.++.
T Consensus 365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NA 444 (586)
T PLN02271 365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNA 444 (586)
T ss_pred CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 7677988887643100 0011233333322222223333333333332 22111223477888899999
Q ss_pred HHHHHHHhhcCCeeec-CCCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCC---CCCCCeEEEee------ccCh
Q 045431 350 DIIVETFNSLGFKVYG-GKNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFG---PGGEGFIRVSA------FGHR 418 (433)
Q Consensus 350 ~~l~~~l~~~g~~~~~-~~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~------~~~~ 418 (433)
+.|.+.|.+.|+.++. ......+++++... .....++..+++.||.++--..++ +..++.|||.. ...+
T Consensus 445 kaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e 524 (586)
T PLN02271 445 QALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLE 524 (586)
T ss_pred HHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCc
Confidence 9999999999999864 33445688998632 245667777888899985433222 22356799994 2257
Q ss_pred hHHHHHHHHHHHhh
Q 045431 419 GNVLEACKRFKHLY 432 (433)
Q Consensus 419 ~~l~~~l~~l~~~l 432 (433)
+|+++..+-|.+++
T Consensus 525 ~d~~~iA~~i~~~~ 538 (586)
T PLN02271 525 SDFETIADFLLRAA 538 (586)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777776654
No 290
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.70 E-value=9.7e-15 Score=142.19 Aligned_cols=345 Identities=12% Similarity=0.101 Sum_probs=199.3
Q ss_pred HHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|... + ..+|.+.+++.+++.+.. ...+ +. +.+..+++.+....+ ..+.
T Consensus 42 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~~~-~~----~~~~~la~~l~~~~p-~~~~ 111 (428)
T PRK12389 42 GKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGV----LYGT-PT----ELEIEFAKMLKEAIP-SLEK 111 (428)
T ss_pred ccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC----ccCC-CC----HHHHHHHHHHHHhCC-CCcE
Confidence 34444455667889999766532 2 367899999999987531 1122 22 334455555543223 3478
Q ss_pred EEEcCChHHHHHHHHHh---cCCCCEEEEeCCCChhhhhhHHHhCCccccc-----cccc---ccceEEEeecCccCCcc
Q 045431 129 IFVSDGAKCDISRLQIV---FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQ-----KDAE---KYGKIEYMRCTAENGFF 197 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~ 197 (433)
+++++++++|......+ .....+|+..+-+|++.............+. ..+. ...++..++.++...+.
T Consensus 112 v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 191 (428)
T PRK12389 112 VRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALK 191 (428)
T ss_pred EEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHH
Confidence 99999999998863222 2345678888888888654333222110000 0000 01123333332111111
Q ss_pred cCCCCC-CCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEec
Q 045431 198 PDLSTV-ARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSS 274 (433)
Q Consensus 198 ~~~~~~-~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 274 (433)
..++.. .++.+|+ ..| +.-.|.+. +.+.+++|.++|++||+++|.||++..+ ..+.......++-.+| +-+
T Consensus 192 ~~l~~~~~~vaavi-~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PD----ivt 265 (428)
T PRK12389 192 EALDKWGDEVAAVL-VEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPD----LTA 265 (428)
T ss_pred HHHHhcCCcEEEEE-EeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCC----eee
Confidence 111111 3444544 455 55567654 6889999999999999999999999977 3321111111222244 237
Q ss_pred ccccccccccceeeeeccccccccCCcchhHHHH---HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHH
Q 045431 275 FSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN---RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDI 351 (433)
Q Consensus 275 ~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 351 (433)
++|.+| .|+.+|.++++++++ +.+. .....++.+.++++.+++.+.|+.... +++.++.+++.++
T Consensus 266 ~gK~lg-gG~Pi~av~~~~~i~--------~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~---~~l~~~~~~~g~~ 333 (428)
T PRK12389 266 LGKIIG-GGLPIGAYGGRKDIM--------EQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ---EGVYEKLDRLGAM 333 (428)
T ss_pred echhhc-CCCceeEEeEHHHHH--------hhhccCCCcccccCCccCHHHHHHHHHHHHHHhc---ccHHHHHHHHHHH
Confidence 899997 899999999988874 3332 122344556788888888888763221 2345556666666
Q ss_pred HHHHHhh----cCC--eeecCCCccEEEEECC--CC---------C---hHHHHHHHHHcCCeEecCCCCCCCCCCCeEE
Q 045431 352 IVETFNS----LGF--KVYGGKNAPYVWVQFP--GR---------S---SWDVFSEILEKTHVVTTPGSGFGPGGEGFIR 411 (433)
Q Consensus 352 l~~~l~~----~g~--~~~~~~~g~~~~~~~~--~~---------~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iR 411 (433)
+.+.|++ +++ .+... .|++ -+.+. .. + ...+...++ ++||.+.+.. .+.+.
T Consensus 334 l~~~L~~l~~~~~~~~~v~r~-~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~ 404 (428)
T PRK12389 334 LEEGILEAAEKHGITITINRL-KGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSK------YEAWF 404 (428)
T ss_pred HHHHHHHHHHhCCCCEEEEec-CcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCC------CCCee
Confidence 6666654 343 23232 3332 33332 11 1 123444444 5699998742 12356
Q ss_pred EeeccChhHHHHHHHHHHHhhC
Q 045431 412 VSAFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 412 i~~~~~~~~l~~~l~~l~~~l~ 433 (433)
+++..++++++++++++.++++
T Consensus 405 ~~l~~t~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 405 LTTAHTEEDIEETLEAVDRAFA 426 (428)
T ss_pred ecCCCCHHHHHHHHHHHHHHHH
Confidence 7777899999999999998763
No 291
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=1.4e-14 Score=141.66 Aligned_cols=347 Identities=10% Similarity=0.023 Sum_probs=200.4
Q ss_pred HHHHhcCCCCceEEecCCCC-CCC-ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEE
Q 045431 54 AAHMLKYPDAEVISLGIGDT-TEP-IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFV 131 (433)
Q Consensus 54 ~~~~~~~~~~~~i~l~~g~~-~~~-~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~ 131 (433)
+......+++..||+..+.. .+. .+|.+.+++.+++.+... ....| . .+....+++.|....+...+.+++
T Consensus 63 G~~l~D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~-~----~~~~~~lae~L~~~~p~~~~~v~f 135 (459)
T PRK06082 63 GIYIEDVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRF-T----NETAIECAEKLTEIAGGELNRVLF 135 (459)
T ss_pred eeEEEECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCC--ccCcc-C----CHHHHHHHHHHHHhCCCCCCEEEE
Confidence 33344456778999863322 233 678999999999976431 11122 1 244445555554322333478999
Q ss_pred cCChHHHHHHHHHhc---CCCCEEEEeCCCChhhhh-hHHHhCCcccccccccccceEEEeecC--------ccCC----
Q 045431 132 SDGAKCDISRLQIVF---GSNVTMAVQDPSYPAYVD-SSVIMGQTGEFQKDAEKYGKIEYMRCT--------AENG---- 195 (433)
Q Consensus 132 ~~G~~~al~~l~~l~---~~gd~Vl~~~p~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~---- 195 (433)
+++++++..+...+. ....+|+....+|++... .+...+.......++.....+..++.. +.+.
T Consensus 136 ~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (459)
T PRK06082 136 APGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVH 215 (459)
T ss_pred CCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHH
Confidence 999999998643332 344778888888877643 322222211101111111122222211 0000
Q ss_pred ----cccCCCCCCCccEEEEcCC-CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceE
Q 045431 196 ----FFPDLSTVARTDIIFFCSP-NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAI 270 (433)
Q Consensus 196 ----~~~~~~~~~~~~~i~l~~p-~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi 270 (433)
+...++...++.+ ++..| ++..+...+.+.+++|.++|++||+++|.||++..+...|.......+.-.+| ++
T Consensus 216 ~~~~l~~~i~~~~~vAa-vIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD-iv 293 (459)
T PRK06082 216 YADYLEYVIEKEGGIGA-FIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD-IL 293 (459)
T ss_pred HHHHHHHHHhcCCCEEE-EEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC-EE
Confidence 0000111134444 44566 44444567889999999999999999999999998755554322222322344 23
Q ss_pred EEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHH
Q 045431 271 ETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 271 ~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (433)
+++|.+| .| +.+|.+++++++. ..........+.+.++++.+++.+.|+.... +++.++.+++.
T Consensus 294 ---~~gKgl~-gG~~P~~av~~~~~i~--------~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g 358 (459)
T PRK06082 294 ---CIGKGLG-GGLVPIAAMITKDKYN--------TAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADS 358 (459)
T ss_pred ---Eeccccc-CCCCcceEEEEcHHHH--------hhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHH
Confidence 4899998 77 5999999987763 1111101113556788888888887763211 23455666666
Q ss_pred HHHHHHHhhc----CC-eeecCCCccEEEEECCCC-----C----hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--
Q 045431 350 DIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR-----S----SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS-- 413 (433)
Q Consensus 350 ~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~-----~----~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~-- 413 (433)
+++.+.|+++ ++ .-+. ..|.++.+.+... . ...+...++ ++||.+.+. +.+.+|++
T Consensus 359 ~~l~~~L~~l~~~~~~i~~vr-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~------~~~~i~~~Pp 430 (459)
T PRK06082 359 QFMRERLLEMKAKYPLIGDVR-GIGLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS------QGNVIQLSPP 430 (459)
T ss_pred HHHHHHHHHHHhhCCCeeeee-eccceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec------CCCEEEEeCC
Confidence 6666666553 32 1122 2466666666411 0 223444555 459998762 23679999
Q ss_pred eccChhHHHHHHHHHHHhh
Q 045431 414 AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 414 ~~~~~~~l~~~l~~l~~~l 432 (433)
+..++++++++++++.+++
T Consensus 431 l~it~~eid~~~~~l~~~l 449 (459)
T PRK06082 431 LIITREELTQALAILEEAI 449 (459)
T ss_pred CccCHHHHHHHHHHHHHHH
Confidence 5679999999999998876
No 292
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.69 E-value=6.2e-15 Score=132.81 Aligned_cols=337 Identities=13% Similarity=0.100 Sum_probs=222.0
Q ss_pred CceEEecCCCC-CCCChHHHHHHHHHHHhhcccCCCCCC--CCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDT-TEPIPEVITSALAKRSYALSTQEGYSG--YGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~--Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
..+--.+++++ ...-.|.+.+|+++.+.+++...+-.+ -+...-...|.+.+|+. .-++..+++++ +--|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~L-----HqK~aALlFsS-CfVAN 244 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADL-----HQKEAALLFSS-CFVAN 244 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHH-----hcCcceeeeee-eeecc
Confidence 34555677765 355789999999999998763332221 12334456778888876 34544444443 33333
Q ss_pred HH-HHHh--cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC--CCccEEEEcCC
Q 045431 140 SR-LQIV--FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV--ARTDIIFFCSP 214 (433)
Q Consensus 140 ~~-l~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~p 214 (433)
+. +..+ .=||..|.-++-.|.+....++..+. +-..+..++-+.+..-++.. .-+|.|-+-+.
T Consensus 245 DstLftLak~lpgcei~SD~gNHASMI~GIrns~v------------~K~IFrHND~~hL~~lL~~~~~svPKivAFEtV 312 (570)
T KOG1360|consen 245 DSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRV------------PKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETV 312 (570)
T ss_pred chHHHHHHHHCCCcEEeccccchHHHHHHhhhcCC------------cceeeccCCHHHHHHHHHhCCCCCCceEEEeee
Confidence 32 3333 34888999899899888887777773 33334443222211112222 35777777788
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC-CcceEEEecccccccccccceeeeeccc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA-KEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
|..+|.+.| +++|++++++||.+-++||+|+-..|+.....+.+-++. +...|.-|++.|+||+-| ||+.+..
T Consensus 313 hSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~ 386 (570)
T KOG1360|consen 313 HSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR 386 (570)
T ss_pred eccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh
Confidence 999999999 889999999999999999999976666544444444433 223378899999999999 9999999
Q ss_pred cccccCCcchhHHHHHHHhhccCC--CcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccE
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNG--ASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPY 371 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~ 371 (433)
.++ +.++.+......+ .++.....++++.+...-+.-..++..-+++..++++.|.+.|+.+.+. ..-.
T Consensus 387 ~Lv--------DmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~-pSHI 457 (570)
T KOG1360|consen 387 KLV--------DMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPN-PSHI 457 (570)
T ss_pred hHH--------HHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCC-Ccce
Confidence 885 6666555433222 2333333344444311111125566677788889999999999999864 4455
Q ss_pred EEEECC-CCChHHHHHHHHHcCCeEecCCCCCC-CCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 372 VWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFG-PGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 372 ~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
+-+++. ...+.+....|+.++||.+..-..-. +.++..+||+- ..+++.++.+++.|..++
T Consensus 458 iPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 458 IPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred eeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHH
Confidence 666665 23456778888999999997654322 44667899983 458888999999888765
No 293
>PRK06105 aminotransferase; Provisional
Probab=99.69 E-value=2e-14 Score=140.86 Aligned_cols=350 Identities=10% Similarity=0.057 Sum_probs=202.1
Q ss_pred HHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
..+......+++..||+..|.. . -..+|.+.+++.+++.+.........| ..+.+.++++.|.+..+.+.+.
T Consensus 37 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~~ 111 (460)
T PRK06105 37 GEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHK-----SHGPVIDLAEKLVAMAPVPMSK 111 (460)
T ss_pred eeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeeccccc-----CCHHHHHHHHHHHHhCCCCCCE
Confidence 3334444566788999977742 2 246899999999999764210111112 2344445555554422333468
Q ss_pred EEEcCChHHHHHHHHHhc-------C-C-CCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCccCCc--
Q 045431 129 IFVSDGAKCDISRLQIVF-------G-S-NVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAENGF-- 196 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l~-------~-~-gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 196 (433)
+++++++++|..+...+. . + ..+|+..+-+|++.......+ +.......++.....+..++......+
T Consensus 112 v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 191 (460)
T PRK06105 112 VFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGL 191 (460)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccccc
Confidence 999999999998632221 1 2 357888888887754322221 211111111111112222222110000
Q ss_pred ------------ccCCCC------CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 197 ------------FPDLST------VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 197 ------------~~~~~~------~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
..+++. ..++.+|+ ..| +.-.|.. .+++.++++.++|++||+++|.||++..+...|..
T Consensus 192 ~~~~~~~~~~~~~~~le~~~~~~~~~~iAavI-vEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~ 270 (460)
T PRK06105 192 PGESEEAFATRLANELEALILAEGPDTIAAFI-GEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNM 270 (460)
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCCCceEEEE-EccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchh
Confidence 001111 12445544 456 5555665 58899999999999999999999999877555543
Q ss_pred CcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHHH
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGLA 328 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~ 328 (433)
.....++-.+| +.+++|.++ .| +.+|.+++++++. +.+.. ....++.+.++++.+++.+
T Consensus 271 f~~~~~~v~PD----i~~~gK~lg-gG~~P~~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a 337 (460)
T PRK06105 271 FGCETFGIKPD----ILVMSKQLS-SSYQPLSAVLMNEKVY--------DPIADESGKIGTFGHGFTASGHPVAAAVALE 337 (460)
T ss_pred hhHHhcCCCCC----eeeeecccc-cCcccceEEEEcHHHH--------HHHhcccccCcccccCCCCCCCHHHHHHHHH
Confidence 33222322344 337899998 67 6899999998874 33321 1134566678888888887
Q ss_pred hcCcCChhHHHHHHHHHHHHHHHHHHHHhhc---CC-eeecCCCccEEEEECCCC-------C-----hHHHHHHHHHcC
Q 045431 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSL---GF-KVYGGKNAPYVWVQFPGR-------S-----SWDVFSEILEKT 392 (433)
Q Consensus 329 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g~-~~~~~~~g~~~~~~~~~~-------~-----~~~~~~~l~~~~ 392 (433)
.|+.... +++.+..+++.+++.+.|+++ ++ .-+. .-|+++-+.+... + ...+...+ .++
T Consensus 338 ~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~-~~~ 412 (460)
T PRK06105 338 NLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVR-GVGLIAAVELVADKATKTPFEPPGKVGARANAAA-HEH 412 (460)
T ss_pred HHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEE-ecceEEEEEEecCcccCCCCCchhHHHHHHHHHH-HHC
Confidence 7763221 234555666666666666554 21 1122 2456655655310 0 12344444 456
Q ss_pred CeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 393 HVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 393 gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
||.+.+. .+.+||+ +..+++++++++++|.+++
T Consensus 413 Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l 447 (460)
T PRK06105 413 GVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRAL 447 (460)
T ss_pred CeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 9999763 1479998 4569999999999998876
No 294
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.7e-14 Score=130.90 Aligned_cols=338 Identities=17% Similarity=0.174 Sum_probs=220.6
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCC--C-CCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYS--G-YGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~-Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
+.|+|=-.++ -.++.+.++.-..+.+... .++. + |+-..-..++.....+..++.++++-.||...||+++.+.
T Consensus 27 ~~ieLIASEN--~~S~aV~~A~gS~ltnKYA-EGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~a 103 (413)
T COG0112 27 EHIELIASEN--FTSPAVMEAQGSDLTNKYA-EGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQA 103 (413)
T ss_pred hceeeeeccc--cCCHHHHHHHhhhhhhccc-cCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHHH
Confidence 3577765554 2677888888777764322 2222 3 4333344444444444444567888889999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC------CCCccEEEEcCC
Q 045431 141 RLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST------VARTDIIFFCSP 214 (433)
Q Consensus 141 ~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~l~~p 214 (433)
.+.++++|||+|+-.+..+.++.......+..|. +.+.+.++++.+.+ ..|.+. ..+||+|+.-..
T Consensus 104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~-------~~~~v~Y~vd~et~-~IDyD~~~k~a~e~kPK~ii~G~S 175 (413)
T COG0112 104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGK-------LFNVVSYGVDPETG-LIDYDEVEKLAKEVKPKLIIAGGS 175 (413)
T ss_pred HHHHHcCCCCeEecccCCCCCcccCCCCCCccce-------eEEeEecccccccC-ccCHHHHHHHHHHhCCCEEEECcc
Confidence 9999999999999998888876543322222221 24788888886643 334332 368998776333
Q ss_pred CCccccCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCC-CCcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 215 NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA-LYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~-~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
.+|- .+ +++++.++|.+.|.++++|-+|- ++...|. |.|+.. ..|+.+|.+|+| +|-|-|.+.++
T Consensus 176 aY~r--~i---d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~------AdvVTtTTHKTl--rGPrGG~Il~~ 242 (413)
T COG0112 176 AYSR--PI---DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH------ADVVTTTTHKTL--RGPRGGIILTN 242 (413)
T ss_pred cccc--cc---CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc------cceEeCCcccCC--CCCCceEEEec
Confidence 3332 22 48889999999999999999985 4655554 444432 238899999998 89999999998
Q ss_pred ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhcCCeeecC-CCcc
Q 045431 293 KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSLGFKVYGG-KNAP 370 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~ 370 (433)
++.+ .+++++.......+.+.+.-.|+.+.-..+.. ...+...+++-++++.|.+.|.+.|++++.. ...-
T Consensus 243 ~eel-------~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnH 315 (413)
T COG0112 243 DEEL-------AKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNH 315 (413)
T ss_pred cHHH-------HHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccce
Confidence 7443 46666544444444443333333322111111 2347778888899999999999999998752 2233
Q ss_pred EEEEECCC-CChHHHHHHHHHcCCeEec----CCCCCCCCCCCeEEEee------ccChhHHHHHHHHHHHhh
Q 045431 371 YVWVQFPG-RSSWDVFSEILEKTHVVTT----PGSGFGPGGEGFIRVSA------FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 371 ~~~~~~~~-~~~~~~~~~l~~~~gi~v~----~g~~f~~~~~~~iRi~~------~~~~~~l~~~l~~l~~~l 432 (433)
.+.+++.. .-.......++.+.||.++ |.+.-++..+..|||.. ...++++++..+-|.+++
T Consensus 316 l~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl 388 (413)
T COG0112 316 LVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVL 388 (413)
T ss_pred EEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 56778762 2245566677788899984 33322233456799994 125788888888887765
No 295
>PRK06062 hypothetical protein; Provisional
Probab=99.69 E-value=1.3e-14 Score=141.70 Aligned_cols=348 Identities=10% Similarity=0.057 Sum_probs=199.1
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
..+......+++..||+..|.- .+ ..+|.+.+++.+++.+... ....| ..+.+..+|+.|.+..+...+.
T Consensus 42 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~~~-----~~~~~~~lae~L~~~~p~~~~~ 114 (451)
T PRK06062 42 AEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT--VAPAH-----ANDARSEAARLIAERAPGDLSK 114 (451)
T ss_pred ceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC--cCCcc-----CCHHHHHHHHHHHHhCCCCCCE
Confidence 3444455667788999977642 22 3678999999999876421 11122 2333445555554322333479
Q ss_pred EEEcCChHHHHHHHHH---hcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccC--Cc-------
Q 045431 129 IFVSDGAKCDISRLQI---VFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN--GF------- 196 (433)
Q Consensus 129 i~~~~G~~~al~~l~~---l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~------- 196 (433)
+++++++++|...... ......+|+..+.+|++.............+.........+..++..... .+
T Consensus 115 v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 194 (451)
T PRK06062 115 VFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEE 194 (451)
T ss_pred EEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHH
Confidence 9999999999886322 22344678888888888654443332111110000001112222111000 00
Q ss_pred -----ccCCC----C--CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccC
Q 045431 197 -----FPDLS----T--VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIP 263 (433)
Q Consensus 197 -----~~~~~----~--~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~ 263 (433)
..+++ . ..++.+|+ ..| +.-.|.. .+.+.+++|.++|++||+++|.||++..|...+.......+.
T Consensus 195 ~~~~~~~~le~~l~~~~~~~iAavi-iEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~g 273 (451)
T PRK06062 195 ECERALAHLERVIELEGPSTIAAIL-LESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFG 273 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEE-EccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcC
Confidence 00111 1 12445544 456 4445665 478899999999999999999999999875544322222222
Q ss_pred CCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHHH--HHhhccCCCcHHHHHHHHHhcCcCChhHHHH
Q 045431 264 GAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFNR--IVCTCFNGASNISQAGGLACLSPEGFKAVHE 340 (433)
Q Consensus 264 ~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 340 (433)
-.+| +.+|+|.+| .|+ .+|.+++++++. +.+.. +...++.+.++++.+++.+.|+.... ++
T Consensus 274 v~PD----i~t~gK~lg-gG~~Pigav~~~~~i~--------~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~---~~ 337 (451)
T PRK06062 274 VVPD----LITFAKGVN-SGYVPLGGVAISEAIA--------ATFADRPYPGGLTYSGHPLACAAAVATINAMEE---EG 337 (451)
T ss_pred CCCC----eeeechhhh-cCCcCcEEEEEcHHHH--------HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh---cC
Confidence 2344 347899998 784 999999988774 33321 12334556788888888888763221 22
Q ss_pred HHHHHHHHH-HHHHHHHhhc----CC-eeecCCCccEEEEECCC--C-------------ChHHHHHHHHHcCCeEecCC
Q 045431 341 VIGFYKENT-DIIVETFNSL----GF-KVYGGKNAPYVWVQFPG--R-------------SSWDVFSEILEKTHVVTTPG 399 (433)
Q Consensus 341 ~~~~~~~~~-~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~--~-------------~~~~~~~~l~~~~gi~v~~g 399 (433)
+.++.++.- +++.+.|+++ +. .-+.. .|.++-+.+.. . ....+...++ ++||.+.+.
T Consensus 338 l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG-~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~ 415 (451)
T PRK06062 338 IVENAARIGAEVLGPGLRELAERHPSVGEVRG-LGVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFVN 415 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEec-cccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEeec
Confidence 344444443 3455555443 32 11222 45555555531 0 0224444544 559998642
Q ss_pred CCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 400 SGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 400 ~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.+.+||+. ..+++++++++++|.+++
T Consensus 416 -------~~~lrl~ppl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 416 -------GNRIHVVPPCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred -------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 25799983 679999999999998876
No 296
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=1.2e-14 Score=142.22 Aligned_cols=350 Identities=11% Similarity=0.080 Sum_probs=201.4
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCC---
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--- 124 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~--- 124 (433)
+..+......+++..||+..|.- .+ ..+|.+.+++.+++.+... .....+. .+.+..+++.+....+.
T Consensus 52 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~-~~~~~~~-----~~~~~~lae~L~~~~p~~~~ 125 (472)
T PRK08742 52 RGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQ-VMLAGFT-----HEPAVQLAEQLLAIAPRQDG 125 (472)
T ss_pred ecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCC-ccccccC-----CHHHHHHHHHHHHhCCCccc
Confidence 34444455567788999977642 22 3678899999998875421 1111221 23345566665432221
Q ss_pred --CCCcEEEcCChHHHHHHHHHh---c-----CC-CCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCc
Q 045431 125 --EEGDIFVSDGAKCDISRLQIV---F-----GS-NVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTA 192 (433)
Q Consensus 125 --~~~~i~~~~G~~~al~~l~~l---~-----~~-gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 192 (433)
+.+.+++++++++|......+ . ++ ..+|+..+.+|++........+....+ ..+.....++..+|...
T Consensus 126 ~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~ 205 (472)
T PRK08742 126 RAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPD 205 (472)
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCC
Confidence 236899999999998853222 1 12 367888999998865443333221111 11111111222333211
Q ss_pred cC----Cc---------ccC----CCC-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccc
Q 045431 193 EN----GF---------FPD----LST-VARTDIIFFCSP--NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYI 251 (433)
Q Consensus 193 ~~----~~---------~~~----~~~-~~~~~~i~l~~p--~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~ 251 (433)
.. +. ... ++. ..++.+|+ ..| ++-.|. ..+++.++++.++|++||+++|.||++..|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI-~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfG 284 (472)
T PRK08742 206 AYLAEPGQSAEDYALQAADALQALFEQSPGEICALI-LEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFG 284 (472)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEE-EccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 00 00 000 111 13455544 466 566676 5578899999999999999999999999886
Q ss_pred cCCCCCcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH------HHhhccCCCcHHHHH
Q 045431 252 SDDNPRSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR------IVCTCFNGASNISQA 324 (433)
Q Consensus 252 ~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~ 324 (433)
..|.......++-.+| ++ +++|.++ .| +.+|.+++++++. +.+.. +...++.+.++++.+
T Consensus 285 RtG~~~a~e~~gv~PD-iv---~~gKgl~-gG~~Plaav~~~~ei~--------~~~~~~~~~~~~~h~~T~~gnpl~~A 351 (472)
T PRK08742 285 RTGTLFACEQAGVMPD-LL---CLSKGLT-GGFLPLSAVLATQQLY--------DAFLDDSRERAFLHSHSYTGNPLACA 351 (472)
T ss_pred CCccchHHHhcCCCCC-EE---EEccccc-CCCCCcceeeccHHHH--------HHhhccCccCccCcCCCCCccHHHHH
Confidence 6654433333332345 33 5799997 88 4999999998874 33321 123455667888888
Q ss_pred HHHHhcCcCChhHHHHHHHHHHHHHHHH---HHHHhhcC-CeeecCCCccEEEEECCC--C-----C-----hHHHHHHH
Q 045431 325 GGLACLSPEGFKAVHEVIGFYKENTDII---VETFNSLG-FKVYGGKNAPYVWVQFPG--R-----S-----SWDVFSEI 388 (433)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l---~~~l~~~g-~~~~~~~~g~~~~~~~~~--~-----~-----~~~~~~~l 388 (433)
++.+.|+-...+ ++.+..++.-+++ .+.+.++. +.-+. ..|+++-+.+.. . . ...+...+
T Consensus 352 aa~a~L~~i~~~---~l~~~~~~~g~~l~~~~~~~~~~~~i~dvR-G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~ 427 (472)
T PRK08742 352 AALATLDIFADD---DVIARNQPTAARMTQLAAQIGEHPHVADVR-QAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAA 427 (472)
T ss_pred HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEe-ccceEEEEEeccCccccccCCchhHHHHHHHHHH
Confidence 888887632221 2222233333333 33344443 22222 246666666631 1 0 12344555
Q ss_pred HHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 389 LEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 389 ~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+ ++||.+.+. + +.+||. +..+++++++++++|.+++
T Consensus 428 ~-~~Gll~~~~------g-~vi~~~PpL~it~~ei~~~~~~l~~~l 465 (472)
T PRK08742 428 L-ARGVVLRPL------G-DVLYWMPPYCVDEAQLALLADTTRHAI 465 (472)
T ss_pred H-HCCeEEEec------C-CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 5 459999762 1 579999 5679999999999999876
No 297
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.69 E-value=4.1e-14 Score=137.61 Aligned_cols=191 Identities=15% Similarity=0.146 Sum_probs=126.2
Q ss_pred eEEecCCCCCCCC-----hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 65 VISLGIGDTTEPI-----PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 65 ~i~l~~g~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
+..|+.|.++.+. +..-.+++.+.+.. ....+++ -..+|++++|+++ +. +++++++|+++++
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~-----~~~~~G~--~~~~fe~~lA~~~----g~--~~~v~~~sGt~al 91 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASLD-----FWLTTGR--FNDAFEKKLAEFL----GV--RYALLVNSGSSAN 91 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHHh-----CcccCCh--hHHHHHHHHHHHh----CC--CeEEEECCHHHHH
Confidence 3446888876543 22333444444432 1122322 3589999999997 54 4688888888888
Q ss_pred HH-HHHh---------cCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CC
Q 045431 140 SR-LQIV---------FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VA 204 (433)
Q Consensus 140 ~~-l~~l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~ 204 (433)
.+ +..+ ++|||+|+++.|+|+.+...+...| ..++.++++.+ .+..+++ + .+
T Consensus 92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G------------~~pv~vdvd~~-~~~id~~~le~~i~~ 158 (438)
T PRK15407 92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNG------------LVPVFVDVELP-TYNIDASLLEAAVSP 158 (438)
T ss_pred HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcC------------CEEEEEecCCC-cCCcCHHHHHHHcCc
Confidence 76 5443 4899999999999999998888888 46777777542 2222322 2 36
Q ss_pred CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccc-cCCCCCcccccCCCCcceEEEecc--cccccc
Q 045431 205 RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYI-SDDNPRSIFEIPGAKEVAIETSSF--SKYAGF 281 (433)
Q Consensus 205 ~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~vi~i~S~--sK~~~~ 281 (433)
++++|+++++ +|... ++++|.++|++||++||+|++|+... +.+. .+.++ .+ +.+.|| +|.+.
T Consensus 159 ~tkaVi~~~~---~G~p~---dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~--~~G~~---gd--~~~fSf~~~k~~~- 224 (438)
T PRK15407 159 KTKAIMIAHT---LGNPF---DLAAVKAFCDKHNLWLIEDNCDALGSTYDGR--MTGTF---GD--IATLSFYPAHHIT- 224 (438)
T ss_pred CCeEEEEeCC---CCChh---hHHHHHHHHHHCCCEEEEECccchhhhcCCe--eeecc---Cc--eEEEeCCCCCCcc-
Confidence 7899888754 55533 48999999999999999999998532 2222 22222 12 555666 46664
Q ss_pred cccceeeeecccccc
Q 045431 282 TGVRLGWTVIPKELL 296 (433)
Q Consensus 282 ~G~r~G~l~~~~~~~ 296 (433)
.|- -|+++++++.+
T Consensus 225 ~ge-GG~l~t~d~~l 238 (438)
T PRK15407 225 MGE-GGAVFTNDPLL 238 (438)
T ss_pred ccC-ceEEEECCHHH
Confidence 343 48999988776
No 298
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=9e-15 Score=141.68 Aligned_cols=350 Identities=10% Similarity=0.048 Sum_probs=202.8
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.. .+ ..++.+.+++.+++.+... .....+ . .+....+++.+.+..+...+.
T Consensus 29 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-~~~~~~-~----~~~~~~lae~L~~~~p~~~~~ 102 (422)
T PRK05630 29 TDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSH-VMFGGL-T----HEPAIKLTRKLLNLTDNGLDH 102 (422)
T ss_pred ceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCC-cccCCc-C----CHHHHHHHHHHHhhCCCCcCE
Confidence 3444445566788999976643 22 3678999999999976421 111111 1 223344444444322323478
Q ss_pred EEEcCChHHHHHH-HH---Hhc-C---C-CCEEEEeCCCChhhhhhHHHh-CCcccc-cccccccceEEEeecCccCC--
Q 045431 129 IFVSDGAKCDISR-LQ---IVF-G---S-NVTMAVQDPSYPAYVDSSVIM-GQTGEF-QKDAEKYGKIEYMRCTAENG-- 195 (433)
Q Consensus 129 i~~~~G~~~al~~-l~---~l~-~---~-gd~Vl~~~p~~~~~~~~~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~-- 195 (433)
+++++++++|.+. +. ... . + ..+|+..+.+|++.......+ +....+ ..++..+.....+|......
T Consensus 103 v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 182 (422)
T PRK05630 103 VFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSS 182 (422)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCC
Confidence 9999999999885 31 111 1 2 357888899898854333222 211100 00111111222232221000
Q ss_pred c--c----cCCCC--CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC
Q 045431 196 F--F----PDLST--VARTDIIFFCSP--NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG 264 (433)
Q Consensus 196 ~--~----~~~~~--~~~~~~i~l~~p--~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 264 (433)
. . ..++. ..++.+|+ ..| +.-.|+. .+.+.+++|.++|++||+++|.||++..+...+.........-
T Consensus 183 ~~~~~~~~~~~~~~~~~~iAAvi-~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv 261 (422)
T PRK05630 183 PQEISEYLRSLELLIDETVAAII-IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV 261 (422)
T ss_pred hHHHHHHHHHHHHHHhhceEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC
Confidence 0 0 00111 13455554 455 6666764 5678999999999999999999999987754443322222222
Q ss_pred CCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH------HHhhccCCCcHHHHHHHHHhcCcCChhH
Q 045431 265 AKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR------IVCTCFNGASNISQAGGLACLSPEGFKA 337 (433)
Q Consensus 265 ~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 337 (433)
.+| ++ +++|.++ .| ..+|++++++++. +.+.. +....+.+.++++.+++.+.|+....
T Consensus 262 ~PD-i~---t~gK~l~-gG~~p~~av~~~~~i~--------~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~-- 326 (422)
T PRK05630 262 TPD-IM---CVGKALT-GGFMSFAATLCTDKVA--------QLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET-- 326 (422)
T ss_pred CCC-ee---eeechhh-cCccccceeeccHHHH--------HHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--
Confidence 344 23 7899996 77 5899999998874 33321 12345566788888888887763221
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc----CCeeecCCCccEEEEECCCC-ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEE
Q 045431 338 VHEVIGFYKENTDIIVETFNSL----GFKVYGGKNAPYVWVQFPGR-SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRV 412 (433)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 412 (433)
+...++++++.+++.+.|+++ .+.-+. ..|+++-+.+... ....+...++ ++||.+.+. + +.+||
T Consensus 327 -~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vR-g~Gl~~~ie~~~~~~~~~~~~~~~-~~Gl~~~~~------g-~~l~~ 396 (422)
T PRK05630 327 -GMWRKQVKRIEAELIAGLSPLAHLPGVADVR-VLGAIGVVEMEQPVDMEEATQAAV-DHGVWLRPF------G-RLVYV 396 (422)
T ss_pred -CcHHHHHHHHHHHHHHHHHHhhcCCCeeeee-ccccEEEEEECCcccHHHHHHHHH-HCCeEEEec------C-CEEEE
Confidence 233445556666666666543 111122 1467777777532 3445555555 459999652 2 57898
Q ss_pred e--eccChhHHHHHHHHHHHhhC
Q 045431 413 S--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 413 ~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
. +..+++++++++++|.++++
T Consensus 397 ~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 397 MPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred ECCccCCHHHHHHHHHHHHHHHh
Confidence 8 56799999999999998863
No 299
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=2.1e-14 Score=139.05 Aligned_cols=221 Identities=13% Similarity=0.125 Sum_probs=135.4
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH-hCCccccccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEFQKDAEKY 182 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~ 182 (433)
.....|++.+|++. +.+ ..++++++++|+.+ +.+++++||+|++....|.+....+.. +...+
T Consensus 69 p~~~~Le~~lA~l~----g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~G--------- 133 (436)
T PRK07812 69 PTQDVVEQRIAALE----GGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLG--------- 133 (436)
T ss_pred chHHHHHHHHHHHh----CCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCe---------
Confidence 34568888888875 543 35666666778875 788899999999999999876654432 12112
Q ss_pred ceEEEeecCccCCcccCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCccc
Q 045431 183 GKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~ 260 (433)
.+++.++ +.. + ..++++ .+++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.-.. ..++
T Consensus 134 i~v~~vd-d~~-d-~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~---~~pl- 203 (436)
T PRK07812 134 IEVSFVE-DPD-D-LDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL---IRPL- 203 (436)
T ss_pred EEEEEEC-CCC-C-HHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc---CCch-
Confidence 2555553 111 1 111221 367899999999999999998 78888999999999999999873111 1222
Q ss_pred ccCCCCcceEEEecccccccccccceeeeeccccccc-cC----------------------CcchhHHHH-HHHhhccC
Q 045431 261 EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLF-SD----------------------GFPVAKDFN-RIVCTCFN 316 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~-~~----------------------~~~~~~~~~-~~~~~~~~ 316 (433)
.. +-.+++.|++|.+|..|--+|.+++...... .. .+.+..... ........
T Consensus 204 ~~----GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 279 (436)
T PRK07812 204 EH----GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGS 279 (436)
T ss_pred hc----CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCC
Confidence 11 1237789999999866655776666432110 00 000000011 11111222
Q ss_pred CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 317 GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 317 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
..++... ..++ .+.+.+..+.++..++...+.+.|+++
T Consensus 280 ~l~p~~a---~l~~--rgl~tL~~R~~~~~~nA~~la~~L~~~ 317 (436)
T PRK07812 280 AISPFNA---FLIA--QGLETLSLRIERHVANAQRVAEFLEAR 317 (436)
T ss_pred CCCHHHH---HHHh--cCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 2333322 2222 344556777788889999999999987
No 300
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.69 E-value=8.7e-15 Score=141.84 Aligned_cols=348 Identities=11% Similarity=0.048 Sum_probs=194.8
Q ss_pred HHHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+.++......+++..||+..|... + ..+|.+.+++.+++.+.. ...+ + .+.+..+++.+....+...+
T Consensus 41 ~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~----~~~~-~----~~~~~~la~~L~~~~~~~~~ 111 (433)
T PRK00615 41 SASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT----SYGL-T----SEQEILFAEELFSYLGLEDH 111 (433)
T ss_pred EeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC----CCCC-C----CHHHHHHHHHHHHhCCCCcC
Confidence 344444556678889999776532 2 368999999999987531 1122 1 23344455554432233336
Q ss_pred cEEEcCChHHHHHHHHHh---cCCCCEEEEeCCCChhhhhh-H--HHhCCcc---ccccc--ccccceEEEeecCccCCc
Q 045431 128 DIFVSDGAKCDISRLQIV---FGSNVTMAVQDPSYPAYVDS-S--VIMGQTG---EFQKD--AEKYGKIEYMRCTAENGF 196 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l---~~~gd~Vl~~~p~~~~~~~~-~--~~~g~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 196 (433)
.+++++++++|......+ .....+|+...-+|++.... + ...+... ..... ...+.....++.++...+
T Consensus 112 ~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (433)
T PRK00615 112 KIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIF 191 (433)
T ss_pred EEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHH
Confidence 899999999998863222 23346788888888885422 1 1111000 00000 000011122222111111
Q ss_pred ccCCCC-CCCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEe
Q 045431 197 FPDLST-VARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETS 273 (433)
Q Consensus 197 ~~~~~~-~~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 273 (433)
...++. ..++.+ +++.| ..-.|... +++.+++|.++|++||+++|.||++..+ ..+.......+.-.+| + .
T Consensus 192 ~~~l~~~~~~~aa-vI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PD--i--~ 265 (433)
T PRK00615 192 QTVMNSLGHRVAG-VIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD--I--T 265 (433)
T ss_pred HHHHHhcCCceEE-EEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCC--e--E
Confidence 111111 133444 44566 44456654 5788999999999999999999999766 3332211111222244 2 2
Q ss_pred cccccccccccceeeeeccccccccCCcchhHHHH---HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHH
Q 045431 274 SFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN---RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 274 S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 350 (433)
+|+|.+| .|+.+|+++++++++ +.+. .....++.+.++++.+++.+.|+.... +...++++++.+
T Consensus 266 ~~gK~lg-gG~p~~av~~~~~i~--------~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~ 333 (433)
T PRK00615 266 VYGKILG-GGLPAAAVVAHKSIM--------DHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQ 333 (433)
T ss_pred EEccccc-CCcceeeeeecHHHH--------hhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHH
Confidence 5899997 789999999998885 3332 112233445678888888887763221 223444455555
Q ss_pred HHHHH----HhhcCCeeecCCCccEEEEECCCCC--------------hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEE
Q 045431 351 IIVET----FNSLGFKVYGGKNAPYVWVQFPGRS--------------SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRV 412 (433)
Q Consensus 351 ~l~~~----l~~~g~~~~~~~~g~~~~~~~~~~~--------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 412 (433)
++.+. +.+.|+.+.....|.++.+.+.... ...+...+++ +||.+.|...- .. =+
T Consensus 334 ~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~----~~--~l 406 (433)
T PRK00615 334 NFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFE----AS--FL 406 (433)
T ss_pred HHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCcccc----cc--ce
Confidence 55444 4444554322224666666664110 1134555554 59999875321 11 25
Q ss_pred eeccChhHHHHHHHHHHHhh
Q 045431 413 SAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 413 ~~~~~~~~l~~~l~~l~~~l 432 (433)
+...++++|++.++++.+++
T Consensus 407 s~~ht~~did~~~~a~~~~~ 426 (433)
T PRK00615 407 SSAHSMENLDYAQNVLIDSL 426 (433)
T ss_pred ecCCCHHHHHHHHHHHHHHH
Confidence 66679999999999999876
No 301
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=8.7e-15 Score=143.38 Aligned_cols=349 Identities=11% Similarity=0.033 Sum_probs=203.7
Q ss_pred HHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
..+......+++..||+..|.. . -..+|.+.+++.+++.+... .....+ .. +.+..+|+.|.+..+...+.
T Consensus 45 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-~~~~~~-~~----~~~~~lae~L~~~~p~~~~~ 118 (460)
T PRK06916 45 GEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAH-STLLGL-AN----VPSILLAEKLIEVVPEGLKK 118 (460)
T ss_pred ccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCC-cccccc-CC----HHHHHHHHHHHHhCCCCCCE
Confidence 4444455566788999876642 2 24788999999999986421 111112 12 33344455444322333468
Q ss_pred EEEcCChHHHHHHHHHhc--------CC-CCEEEEeCCCChhhhhhHHHhCCc-ccccccccccceEEEeecCc-----c
Q 045431 129 IFVSDGAKCDISRLQIVF--------GS-NVTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEKYGKIEYMRCTA-----E 193 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l~--------~~-gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~-----~ 193 (433)
+++++++++|......+. .+ ..+|+..+.+|++.......++.. .....++........+|... .
T Consensus 119 v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~ 198 (460)
T PRK06916 119 VFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPY 198 (460)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccccccc
Confidence 999999999988632221 13 367888999898855333333211 11111111112233333210 0
Q ss_pred C-Cc-------ccC----CCC-CCCccEEEEcCC--CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 194 N-GF-------FPD----LST-VARTDIIFFCSP--NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 194 ~-~~-------~~~----~~~-~~~~~~i~l~~p--~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
+ .. ... ++. ..++.+|+ ..| +.-.|+. .+++.++++.++|++||+++|.||++..+...|...
T Consensus 199 ~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi-~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~ 277 (460)
T PRK06916 199 GNDKAEIVKKHLEELEELLKEKHEEIAAII-VEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF 277 (460)
T ss_pred CCChHHHHHHHHHHHHHHHHhCCCcEEEEE-EeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh
Confidence 0 00 000 111 13455554 455 5666765 588999999999999999999999998775555433
Q ss_pred cccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHH-------HHHhhccCCCcHHHHHHHHHh
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFN-------RIVCTCFNGASNISQAGGLAC 329 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~q~~~~~~ 329 (433)
....+.-.+| ++ +++|.++ .| +.+|.+++++++. +.+. .....++.+.++++.+++.+.
T Consensus 278 a~~~~gv~PD-iv---~~gK~l~-gG~~Pi~av~~~~ei~--------~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~ 344 (460)
T PRK06916 278 ACEHENVTPD-IM---TAGKGLT-GGYLPIAITVTTDEIY--------NAFYGDYEEQKTFFHGHSYTGNPLGCAVALAN 344 (460)
T ss_pred HHHhcCCCCC-ee---eeehhhh-cCccccceeeecHHHH--------HHhhccccccCccccCCCCCCCHHHHHHHHHH
Confidence 2222332345 23 6799998 88 5999999998874 3222 122344555788888888888
Q ss_pred cCcCChhHHHHHHHHHHHHHHHHHHHHhhc---C-CeeecCCCccEEEEECCC--C------C----hHHHHHHHHHcCC
Q 045431 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSL---G-FKVYGGKNAPYVWVQFPG--R------S----SWDVFSEILEKTH 393 (433)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g-~~~~~~~~g~~~~~~~~~--~------~----~~~~~~~l~~~~g 393 (433)
|+.... +.+.++.+++-+++.+.|+++ . +.-+.. .|.++-+.+.. . . ...+...++ ++|
T Consensus 345 l~~l~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG-~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~G 419 (460)
T PRK06916 345 LELYEK---TNLIEQVARKTEYVATQLEDLFALKHVGDIRQ-LGLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELG 419 (460)
T ss_pred HHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeec-CCceeeEEeecccccccCCCchhhHHHHHHHHHH-HCC
Confidence 763221 234556666666777766654 1 111222 34555555531 0 0 123445544 459
Q ss_pred eEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 394 VVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 394 i~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|.+.|. + +.+|+. +..+++++++++++|.+++
T Consensus 420 vl~~~~------g-~~l~~~Ppl~it~~~id~~~~~l~~~l 453 (460)
T PRK06916 420 MLTRPL------G-NTIVFMPPLASTIDELDEMLRILYKAI 453 (460)
T ss_pred eEEEec------C-CEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 999763 1 468887 5679999999999999876
No 302
>PRK07481 hypothetical protein; Provisional
Probab=99.69 E-value=4e-14 Score=138.39 Aligned_cols=350 Identities=11% Similarity=0.078 Sum_probs=202.8
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCC-CCCC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG-IEEG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~-~~~~ 127 (433)
..+......+++..||+..|.- .+ ..+|.+.+++.+++.+.........+ ..+.+..+|+.|.+..+ -..+
T Consensus 31 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~-----~~~~~~~lae~L~~~~~~~~~~ 105 (449)
T PRK07481 31 GDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGT-----THPRAIELSYELIDMFAPEGMR 105 (449)
T ss_pred ccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceeccccc-----CCHHHHHHHHHHHHhcCCCCCC
Confidence 4444455567788999976632 22 36788999999998763210011112 22444556666544222 1246
Q ss_pred cEEEcCChHHHHHHHHHh----c----CCC-CEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccC--C
Q 045431 128 DIFVSDGAKCDISRLQIV----F----GSN-VTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAEN--G 195 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l----~----~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~ 195 (433)
.+++++++++|+.....+ . ++| .+|+..+.+|++.......++....+ ..++.....+..++..... .
T Consensus 106 ~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 185 (449)
T PRK07481 106 RVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNP 185 (449)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccc
Confidence 899999999998853222 1 123 57888888898855333232211111 0011111122222211000 0
Q ss_pred cc-cC-----------CC-----C-CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 196 FF-PD-----------LS-----T-VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 196 ~~-~~-----------~~-----~-~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
+. .+ ++ . ..++.+|+ ..| +.-.|. ..+.+.++++.++|++||+++|.||++..|...+.
T Consensus 186 ~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAvi-iEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 264 (449)
T PRK07481 186 FTEQDPEELARICARLLEREIAFQGPDTIAAFI-AEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS 264 (449)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEE-EecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch
Confidence 00 00 01 1 13455555 456 555566 45788899999999999999999999998765554
Q ss_pred CCcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHH
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGL 327 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~ 327 (433)
......++-.+| ++ +++|.++ .| +.+|.+++++++. +.+.. ....++.+.++++.+++.
T Consensus 265 ~~a~~~~gv~PD-iv---~~gKgl~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~ 331 (449)
T PRK07481 265 WFGSRGWGVKPD-IM---CLAKGIT-SGYVPLGATMVNARIA--------DAFEANADFGGAIMHGYTYSGHPVACAAAL 331 (449)
T ss_pred hhHhhhcCCCCC-EE---EEeeccc-CCCcCceEEEEcHHHH--------HHHhccCccccccccCCCCCCCHHHHHHHH
Confidence 322222322344 23 5799997 78 5999999998874 33321 134455667889888888
Q ss_pred HhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc----CC-eeecCCCccEEEEECCCC-------C-----hHHHHHHHHH
Q 045431 328 ACLSPEGFKAVHEVIGFYKENTDIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR-------S-----SWDVFSEILE 390 (433)
Q Consensus 328 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~-------~-----~~~~~~~l~~ 390 (433)
+.|+.... ++..++.++.-+.+.+.|+++ ++ .-+. ..|.++.+.+... + ...+...++
T Consensus 332 a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~- 406 (449)
T PRK07481 332 ATLDIVVR---EDLPANAAKRGAYLLEGLQPLKERFELVGDVR-GKGLMLALDLVADKATREPIDPSKGYANAVADVAR- 406 (449)
T ss_pred HHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEe-ecceEEEEEecccccccCCCCchhHHHHHHHHHHH-
Confidence 88763221 344555666666666666654 22 1122 2456666666311 1 123444444
Q ss_pred cCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 391 KTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 391 ~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
++||.+.+.. +.+||+ +..+++++++++++|.+++
T Consensus 407 ~~Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l 443 (449)
T PRK07481 407 ENGVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGL 443 (449)
T ss_pred hCCeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 4599997631 358888 5679999999999999876
No 303
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=1.2e-14 Score=142.34 Aligned_cols=350 Identities=11% Similarity=0.042 Sum_probs=205.8
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+.++......+++..||+..|.. . -..+|.+.+++.+++.+... .....| ..+.+..+|+.+....+...+
T Consensus 35 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~-~~~~~~-----~~~~~~~lae~L~~~~p~~~~ 108 (466)
T PRK07030 35 RGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEH-VILAGF-----SHEPVIELSERLVKITPPGLS 108 (466)
T ss_pred eeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCC-cccccc-----CCHHHHHHHHHHHHhCCCCcC
Confidence 34444455567788999976642 2 23678899999999876421 111122 124445555555432233346
Q ss_pred cEEEcCChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhHHHhCCccc-ccccccccceEEEeecCccC---
Q 045431 128 DIFVSDGAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSSVIMGQTGE-FQKDAEKYGKIEYMRCTAEN--- 194 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~--- 194 (433)
.+++++++++|......+. ....+|+....+|++.......++.... ...++.....+..+|.....
T Consensus 109 ~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~ 188 (466)
T PRK07030 109 RCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRP 188 (466)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccc
Confidence 8999999999988632221 1235788888888886544333322111 11111111123333321100
Q ss_pred -Cc---------ccCCC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 195 -GF---------FPDLS----T-VARTDIIFFCSP--NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 195 -~~---------~~~~~----~-~~~~~~i~l~~p--~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
+. ...++ . ..++.+|+ ..| +.-.|. ..+++.++++.++|++||+++|.||++..|...+..
T Consensus 189 ~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi-~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~ 267 (466)
T PRK07030 189 EGMSWEEHSRRMFAHMEQTLAEHHDEIAAVI-VEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTM 267 (466)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCceEEEE-EecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccc
Confidence 00 00011 1 13455544 456 555566 457789999999999999999999999988655543
Q ss_pred CcccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHH-------HHHhhccCCCcHHHHHHHHH
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFN-------RIVCTCFNGASNISQAGGLA 328 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~q~~~~~ 328 (433)
.....++-.+| ++ +++|.++ .| +.+|.+++++++. +.+. .....++.+.++++.+++.+
T Consensus 268 ~a~~~~gv~PD-iv---~~gKgl~-gG~~Pi~av~~~~ei~--------~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a 334 (466)
T PRK07030 268 FACEQAGIRPD-FL---CLSKALT-GGYLPLAAVLTTDTVY--------QAFYDDYPTLRAFLHSHSYTGNPLACAAALA 334 (466)
T ss_pred hHHHhcCCCCC-EE---eeehhcc-CCcccceEEEecHHHH--------HHHhcccccccccccCCCCCCCHHHHHHHHH
Confidence 32223332344 33 5799998 89 5999999998874 3332 12344566678999988888
Q ss_pred hcCcCChhHHHHHHHHHHHHHHHHHHHHhhc---C-CeeecCCCccEEEEECCCC---------C---hHHHHHHHHHcC
Q 045431 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSL---G-FKVYGGKNAPYVWVQFPGR---------S---SWDVFSEILEKT 392 (433)
Q Consensus 329 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g-~~~~~~~~g~~~~~~~~~~---------~---~~~~~~~l~~~~ 392 (433)
.|+.... +++.++.++.-+++.+.|+++ . +.-+.. .|+++-+.+... . ...+...+++ +
T Consensus 335 ~L~~i~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG-~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 409 (466)
T PRK07030 335 TLDIFEQ---DNVIENNRALARRMAEATAHLADHPHVAEVRQ-TGMILAIEMVQDKASKTPYPWQERRGLKVYQHALE-R 409 (466)
T ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEe-ceeEEEEEeccCccccccCcchhHHHHHHHHHHHH-C
Confidence 8763222 334455556666666666553 2 221222 456666666310 0 1234455554 5
Q ss_pred CeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 393 HVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 393 gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
||.+.+. + +.+|+. +..+++++++++++|.+++
T Consensus 410 Gvl~~~~------g-~~i~~~Ppl~it~~eid~~~~~l~~al 444 (466)
T PRK07030 410 GALLRPL------G-SVVYFLPPYVITPEQIDFLAEVASEGI 444 (466)
T ss_pred CeEEEec------C-CEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 9999752 1 468887 5679999999999999876
No 304
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.68 E-value=1e-14 Score=141.74 Aligned_cols=346 Identities=10% Similarity=0.002 Sum_probs=197.6
Q ss_pred HhcCCCCceEEecCCC---CCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 57 MLKYPDAEVISLGIGD---TTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 57 ~~~~~~~~~i~l~~g~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
....+++..+|+..|. +--..++.+.+++.+++.+... ....+.......++-+.+++. .+..-+.+++++
T Consensus 39 l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~----~~~~~~~v~f~~ 112 (427)
T TIGR00508 39 LTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSH--VMFGGFTHKPAIELCQKLVKM----TPNALDCVFLAD 112 (427)
T ss_pred EEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCC--ccccccCCHHHHHHHHHHHhh----CCCCCCEEEEeC
Confidence 3344577899997765 2224678999999999876431 111111122233444444443 233347899999
Q ss_pred ChHHHHHH-HHH-h--c----CC-CCEEEEeCCCChhhhhhHHHh-CCccccc-ccccccceEEEeecCcc--C-Cc---
Q 045431 134 GAKCDISR-LQI-V--F----GS-NVTMAVQDPSYPAYVDSSVIM-GQTGEFQ-KDAEKYGKIEYMRCTAE--N-GF--- 196 (433)
Q Consensus 134 G~~~al~~-l~~-l--~----~~-gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~-~~~~~~~~~~~~~~~~~--~-~~--- 196 (433)
+++++... +.. . . .+ ..+|+..+-+|.+.......+ +....+. .+.........++.... . .+
T Consensus 113 sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 192 (427)
T TIGR00508 113 SGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEE 192 (427)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHH
Confidence 99998875 421 1 1 12 367888888888765333322 2111000 00000011112211000 0 00
Q ss_pred -ccCCC----C-CCCccEEEEcCC--CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCc
Q 045431 197 -FPDLS----T-VARTDIIFFCSP--NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKE 267 (433)
Q Consensus 197 -~~~~~----~-~~~~~~i~l~~p--~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 267 (433)
..+++ . ..++.+ +++.| ++-.|. ..+.+.+++|.++|++||+++|+||++.++...+.......++-.+|
T Consensus 193 ~~~~l~~~l~~~~~~vaa-vivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD 271 (427)
T TIGR00508 193 AITPLAKLMELHSDEIAA-VILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD 271 (427)
T ss_pred HHHHHHHHHHhcCCcEEE-EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC
Confidence 01111 1 123444 55566 554555 44789999999999999999999999977655443322222222234
Q ss_pred ceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHHHH-----HhhccCCCcHHHHHHHHHhcCcCChhHHHHH
Q 045431 268 VAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFNRI-----VCTCFNGASNISQAGGLACLSPEGFKAVHEV 341 (433)
Q Consensus 268 ~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 341 (433)
++ +++|.++ .|+ .++.+++++++. +.+... ....+...++++.+++.+.|+.... +++
T Consensus 272 -i~---~~gK~l~-gG~~p~~a~~~~~~~~--------~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~~ 335 (427)
T TIGR00508 272 -IL---CVGKALT-GGYMTLSATVTTDKVA--------QTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE---GEW 335 (427)
T ss_pred -EE---Eechhhh-cCcccceEEEEcHHHH--------HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCH
Confidence 23 4799996 885 788888887764 333321 1233445678888888887762211 234
Q ss_pred HHHHHHHHHHHHHHHhhcCCe-eecC--CCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--c
Q 045431 342 IGFYKENTDIIVETFNSLGFK-VYGG--KNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--F 415 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~g~~-~~~~--~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~ 415 (433)
.++++++.+++.+.|++++.. .... ..|.++.+.+.. .....+...+++ +||.+.+.. ..+|++. .
T Consensus 336 ~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~-~Gv~~~~~~-------~~l~~~ppl~ 407 (427)
T TIGR00508 336 QKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVE-QGVWIRPFG-------KLIYVMPPYI 407 (427)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHH-CCeEEEecC-------CEEEEECCCC
Confidence 567777777788877765321 1111 135666666652 234556666555 499996531 3689984 5
Q ss_pred cChhHHHHHHHHHHHhhC
Q 045431 416 GHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 416 ~~~~~l~~~l~~l~~~l~ 433 (433)
.+++++++++++|.+++.
T Consensus 408 ~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 408 ITTEQLQKLTAALIEALH 425 (427)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 799999999999998863
No 305
>PRK07483 hypothetical protein; Provisional
Probab=99.68 E-value=4.1e-14 Score=137.98 Aligned_cols=352 Identities=10% Similarity=0.059 Sum_probs=201.9
Q ss_pred HHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEc
Q 045431 56 HMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVS 132 (433)
Q Consensus 56 ~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~ 132 (433)
.....+++..||+..|.. .+ ..+|.+.+++.+++.+... .....+ ..+....+++.|....+-..+.++++
T Consensus 23 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~-~~~~~~-----~~~~~~~lae~L~~~~p~~~~~v~f~ 96 (443)
T PRK07483 23 YLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY-AHTSFF-----TTEPAEALADRLVAAAPAGLEHVYFV 96 (443)
T ss_pred EEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC-cccccc-----CCHHHHHHHHHHHHhCCCCCCEEEEc
Confidence 344556778999977643 22 3678899999999875421 011112 12334455555543223234689999
Q ss_pred CChHHHHHH-HH--Hhc-----CCC-CEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCc-cCCcc----
Q 045431 133 DGAKCDISR-LQ--IVF-----GSN-VTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTA-ENGFF---- 197 (433)
Q Consensus 133 ~G~~~al~~-l~--~l~-----~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~~---- 197 (433)
++++++... +. ... ++| .+|+..+.+|++.......+.....+ ..++.....+..++... .....
T Consensus 97 ~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 176 (443)
T PRK07483 97 SGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGES 176 (443)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCC
Confidence 999999885 31 112 133 56888888888865333333211111 11111111222332210 00000
Q ss_pred ---------cCCC----C--CCCccEEEEcCC-CC-ccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc
Q 045431 198 ---------PDLS----T--VARTDIIFFCSP-NN-PTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI 259 (433)
Q Consensus 198 ---------~~~~----~--~~~~~~i~l~~p-~n-PtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 259 (433)
.+++ . .+++.+|+ ..| +. -.| ...+++.++++.++|++||+++|.||++..+...+.....
T Consensus 177 ~~~~~~~~~~~l~~~~~~~~~~~iAAvi-vEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~ 255 (443)
T PRK07483 177 DEAYGQRLADELEAKILELGPDTVAAFV-AETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFAC 255 (443)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEE-EeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHH
Confidence 0111 1 13445544 456 32 235 4567889999999999999999999999988655543322
Q ss_pred cccCCCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHHH----HHhhccCCCcHHHHHHHHHhcCcCC
Q 045431 260 FEIPGAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFNR----IVCTCFNGASNISQAGGLACLSPEG 334 (433)
Q Consensus 260 ~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~ 334 (433)
..+.-.+| ++ +++|.++ .|+ .+|.+++++++. +.+.. +...++.+.++++.+++.+.++...
T Consensus 256 ~~~gv~PD-iv---~~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~ 322 (443)
T PRK07483 256 EEDGVAPD-LV---TIAKGLG-AGYQPIGAVLASDRIY--------DAIADGSGFFQHGHTYLGHATACAAALAVQRVIA 322 (443)
T ss_pred hhcCCCCC-ee---eehhhhc-cCccccEEEEEcHHHH--------HHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 22332344 33 5799997 896 999999998874 33321 1234566678899888888876322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh----cCC-eeecCCCccEEEEECCCC-------C-----hHHHHHHHHHcCCeEec
Q 045431 335 FKAVHEVIGFYKENTDIIVETFNS----LGF-KVYGGKNAPYVWVQFPGR-------S-----SWDVFSEILEKTHVVTT 397 (433)
Q Consensus 335 ~~~~~~~~~~~~~~~~~l~~~l~~----~g~-~~~~~~~g~~~~~~~~~~-------~-----~~~~~~~l~~~~gi~v~ 397 (433)
. +++.++.++..+++.+.|++ ++. .-+.. .|+++-+.+... + ...+...+++ +||.+.
T Consensus 323 ~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG-~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~ 397 (443)
T PRK07483 323 E---DGLLANVRARGEQLRARLRERLGQHPHVGDIRG-RGLFVGVELVADRATKAPFDPALKLHARIKREAMA-RGLMVY 397 (443)
T ss_pred h---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEee-cccEEEEEEeecccccCCCCchhhHHHHHHHHHHH-CCcEEE
Confidence 1 33445555566666666654 221 11222 455555555310 0 1234555554 599997
Q ss_pred CCCC-CCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 398 PGSG-FGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 398 ~g~~-f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+... ......+.+||. +..+++++++++++|.+++
T Consensus 398 ~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l 435 (443)
T PRK07483 398 PMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAI 435 (443)
T ss_pred ecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 6421 001113679998 6779999999999999876
No 306
>PRK06917 hypothetical protein; Provisional
Probab=99.68 E-value=3.9e-14 Score=138.25 Aligned_cols=357 Identities=11% Similarity=0.028 Sum_probs=204.1
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+.++......+++..||+..|.. .+ ..+|.+.+++.+++.+... .....|. .+.+..+|+.|....+...+
T Consensus 19 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~-~~~~~~~-----~~~~~~lae~L~~~~p~~~~ 92 (447)
T PRK06917 19 HGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSF-VYRSQFT-----SEPAEKLAKKLSDLSPGDLN 92 (447)
T ss_pred eeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcC-ccccccC-----CHHHHHHHHHHHHhCCCCCC
Confidence 34444455566778999976642 22 3689999999999986321 1111221 24444555555442233346
Q ss_pred cEEEcCChHHHHHHHHHhc---------CCCCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccC--C
Q 045431 128 DIFVSDGAKCDISRLQIVF---------GSNVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAEN--G 195 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l~---------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~ 195 (433)
.+++++++++|......+. ....+|+..+.+|++.............+ ..++.....+..++..... .
T Consensus 93 ~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (447)
T PRK06917 93 WSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCP 172 (447)
T ss_pred EEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccc
Confidence 8999999999988632222 12367888898898865443333211110 0011100111112210000 0
Q ss_pred cc-----------cCCC----CC--CCccEEEEcCC-CC-cccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 196 FF-----------PDLS----TV--ARTDIIFFCSP-NN-PTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 196 ~~-----------~~~~----~~--~~~~~i~l~~p-~n-PtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
+. ..++ .. .++.+|++ .| +. --|+ ..+++.+++|.++|++||+++|.||++..|...+.
T Consensus 173 ~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~-EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~ 251 (447)
T PRK06917 173 VQKVYPTCQLACATELETAIERIGAEHIAAFIA-EPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA 251 (447)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCceEEEEE-eccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc
Confidence 00 0011 11 24555554 56 33 3344 55789999999999999999999999987755444
Q ss_pred CCcccccCCCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHHH----HHhhccCCCcHHHHHHHHHhc
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFNR----IVCTCFNGASNISQAGGLACL 330 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l 330 (433)
......++-.+| +-+++|.++ .|+ .+|.+++++++. +.+.. +...++.+.++++.+++.+.|
T Consensus 252 ~~a~~~~gv~PD----i~~~gK~l~-~G~~Pi~a~~~~~~i~--------~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l 318 (447)
T PRK06917 252 MFAMEHWGVEPD----IMTLGKGLG-AGYTPIAATVVSDRVM--------EPILRGSRSIMSGHTLSANPLSAATALAVL 318 (447)
T ss_pred hhhHHhcCCCCC----EEEeeehhc-cCCcceEEEEEcHHHH--------HHHhccCcccccccCCCCCHHHHHHHHHHH
Confidence 322222332344 236899998 885 999999988874 33321 123345567888888888887
Q ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHhhc----CCe-eecCCCccEEEEECCC-------C-C----hHHHHHHHHHcCC
Q 045431 331 SPEGFKAVHEVIGFYKENTDIIVETFNSL----GFK-VYGGKNAPYVWVQFPG-------R-S----SWDVFSEILEKTH 393 (433)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~-~~~~~~g~~~~~~~~~-------~-~----~~~~~~~l~~~~g 393 (433)
+.... +++.++++++-+.+.+.|+++ ++. -+. ..|.++.+.+.. . . ...+...++ ++|
T Consensus 319 ~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G 393 (447)
T PRK06917 319 EYMEK---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVR-GKGLLIGVEFVADKKTKQPFSKSQAVASELISVAA-KNG 393 (447)
T ss_pred HHHHH---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe-ecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHH-hCC
Confidence 63221 234455666666666666553 321 122 245555565521 0 1 223444554 459
Q ss_pred eEecCCCC-CCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 394 VVTTPGSG-FGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 394 i~v~~g~~-f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|.+.+... ......+.+|++ +..+++++++++++|.+++
T Consensus 394 vl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l 435 (447)
T PRK06917 394 LLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSV 435 (447)
T ss_pred cEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 99987421 111124679998 5689999999999998876
No 307
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.68 E-value=2.2e-14 Score=141.40 Aligned_cols=346 Identities=11% Similarity=0.057 Sum_probs=199.0
Q ss_pred HHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccC-CCCCCcEEE
Q 045431 56 HMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDL-GIEEGDIFV 131 (433)
Q Consensus 56 ~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~-~~~~~~i~~ 131 (433)
.....+++..||+..|.- . -..+|.+.+++.+++.+... ...+ ..+..+....+++.|...+ +.+.+.+++
T Consensus 82 ~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~---~~~~--~~~~~~~~~~lae~L~~~~~~~~~~~v~f 156 (504)
T PLN02760 82 YVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF---YHSF--WNRTTKPSLDLAKELLEMFTARKMGKVFF 156 (504)
T ss_pred EEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc---eecc--cccCcHHHHHHHHHHHhhcCCCCCCEEEE
Confidence 334456778999987642 2 24689999999999976421 1111 1123455555666654321 223457899
Q ss_pred cCChHHHHHHHHHhc--------CCC-CEEEEeCCCChhhhh-hHHHhCCcccccccccccceEEEeecCc-------c-
Q 045431 132 SDGAKCDISRLQIVF--------GSN-VTMAVQDPSYPAYVD-SSVIMGQTGEFQKDAEKYGKIEYMRCTA-------E- 193 (433)
Q Consensus 132 ~~G~~~al~~l~~l~--------~~g-d~Vl~~~p~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~- 193 (433)
++++++|......+. .++ .+|+..+-+|++... .....|.......++.....+..++... .
T Consensus 157 ~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 236 (504)
T PLN02760 157 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGE 236 (504)
T ss_pred eCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCC
Confidence 999999988632222 122 578888888877532 2222222110001111111121222110 0
Q ss_pred --CCc----ccCCC-----CC-CCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc
Q 045431 194 --NGF----FPDLS-----TV-ARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI 259 (433)
Q Consensus 194 --~~~----~~~~~-----~~-~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 259 (433)
..+ ..+++ .. .++.+ ++..| +.-.|.+ .+++.+++|.++|++||+++|.||++..|...|.....
T Consensus 237 ~~~~~~~~~~~~le~~l~~~~~~~iAA-vI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~ 315 (504)
T PLN02760 237 TEEEFSTRLADNLENLILKEGPETIAA-FIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGC 315 (504)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHH
Confidence 000 00111 11 23444 45566 5555654 47889999999999999999999999877555543322
Q ss_pred cccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHHHhcC
Q 045431 260 FEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGLACLS 331 (433)
Q Consensus 260 ~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~ 331 (433)
..+.-.+| +.+|+|.+| .| +.+|.+++++++. +.+.. +....+.+.++++.+++.+.|+
T Consensus 316 e~~gv~PD----ivtlgK~lg-gG~~PigAv~~~~~i~--------d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le 382 (504)
T PLN02760 316 DKYNIKPD----LVSLAKALS-SAYMPIGAVLVSPEIS--------DVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK 382 (504)
T ss_pred HhcCCCCc----EEEeccccc-CCccccceEeecHHHH--------hhhhcccccccCcccCCCCCCCHHHHHHHHHHHH
Confidence 22222244 457899997 67 5899999998874 33321 1234456678899988888886
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHhhc---CCe-eecCCCccEEEEECCC-CC-----------hHHHHHHHHHcCCeE
Q 045431 332 PEGFKAVHEVIGFYKENTDIIVETFNSL---GFK-VYGGKNAPYVWVQFPG-RS-----------SWDVFSEILEKTHVV 395 (433)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g~~-~~~~~~g~~~~~~~~~-~~-----------~~~~~~~l~~~~gi~ 395 (433)
.... +++.++.+++.+++.+.|+++ ++. -+. ..|.++-+.+.. .. ...+...++ ++||.
T Consensus 383 ~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl 457 (504)
T PLN02760 383 IYKE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIR-GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGML 457 (504)
T ss_pred HHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEE-eCceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcE
Confidence 3221 234555666666666666553 221 122 245666666631 10 123444444 55999
Q ss_pred ecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 396 TTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 396 v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+. .+.+||+ +..+++++++++++|.+++
T Consensus 458 ~~~~-------g~~lrl~Ppl~it~eeid~~~~~l~~al 489 (504)
T PLN02760 458 VRVA-------GDNIMMSPPLIITPEEVDELISIYGKAL 489 (504)
T ss_pred EEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 9763 1468999 5679999999999998876
No 308
>PRK15029 arginine decarboxylase; Provisional
Probab=99.68 E-value=6.4e-15 Score=148.97 Aligned_cols=182 Identities=10% Similarity=0.070 Sum_probs=117.1
Q ss_pred CCCCCCCCCHH-HHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCccccc
Q 045431 99 SGYGAEQGEKP-LRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQ 176 (433)
Q Consensus 99 ~~Y~~~~g~~~-lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 176 (433)
.+...+.|... ..+..|+.+ |.+ ...++++|++.++.+ +.+++++||+|+++..||.++.+.+.+.|..++|.
T Consensus 198 D~L~~p~G~I~eAq~~aA~~f----gA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 198 GSLLDHTGAFGESEKYAARVF----GAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred CCCCCCCcHHHHHHHHHHHHh----CCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 34334455544 444444444 654 578899999999886 78899999999999999999999999999765543
Q ss_pred ccccccceEEEeecCcc-CCccc-----CCCCCC--------CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 177 KDAEKYGKIEYMRCTAE-NGFFP-----DLSTVA--------RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~--------~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
..... -..+..... ..+.+ .+...+ ++++++|++|++ .|++++ +++|+++|++++++|+
T Consensus 273 ~P~~~---~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~ll 345 (755)
T PRK15029 273 VPSRN---RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLH 345 (755)
T ss_pred ccccc---ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEE
Confidence 22210 000000000 00000 111123 344899999966 899988 7899999999999999
Q ss_pred Eeccccc-cccCCCCCccccc-----CCCCcceEEEeccccccccccccee-eeecccc
Q 045431 243 YDSAYAL-YISDDNPRSIFEI-----PGAKEVAIETSSFSKYAGFTGVRLG-WTVIPKE 294 (433)
Q Consensus 243 ~De~~~~-~~~~~~~~~~~~~-----~~~~~~vi~i~S~sK~~~~~G~r~G-~l~~~~~ 294 (433)
+||+|+. +.|.+..+....+ ......++++-|.+|++ +++..| ++.....
T Consensus 346 vDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~ 402 (755)
T PRK15029 346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREG 402 (755)
T ss_pred EECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCC
Confidence 9999976 5555432211222 10112248899999998 566655 6666444
No 309
>PRK02769 histidine decarboxylase; Provisional
Probab=99.68 E-value=4.2e-14 Score=134.68 Aligned_cols=291 Identities=12% Similarity=0.090 Sum_probs=184.8
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcE--EEcCChHHHHHH-HHHh--cCCCCEEEEeCCCChhhhhhHHHhCCccccccccc
Q 045431 106 GEKPLRAAIASTFYKDLGIEEGDI--FVSDGAKCDISR-LQIV--FGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180 (433)
Q Consensus 106 g~~~lr~~la~~l~~~~~~~~~~i--~~~~G~~~al~~-l~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 180 (433)
...++.+.+.+++.+.++++++++ ++|+|++++... +... ..++++|++.+-.|++....++.+|.
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~--------- 132 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRI--------- 132 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCC---------
Confidence 345666666666666568876665 889999999654 3222 35788999999999999988888884
Q ss_pred ccceEEEeecCccCCcccC-CCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcC---CEEEEeccccccc
Q 045431 181 KYGKIEYMRCTAENGFFPD-LST-----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNG---SIIVYDSAYALYI 251 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~---~~li~De~~~~~~ 251 (433)
+...++.++++..+.+ +++ ..++.+|+++.++|+||.+-| +++|.++|++|| +++++|.+++.+.
T Consensus 133 ---~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~ 206 (380)
T PRK02769 133 ---KSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMI 206 (380)
T ss_pred ---CCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEeccccee
Confidence 4445555543322222 211 124788888899999999988 788888899998 6999999998643
Q ss_pred cC--CCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHh
Q 045431 252 SD--DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLAC 329 (433)
Q Consensus 252 ~~--~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 329 (433)
.. ....++ .+. .+...+..|.+|+++ ....+|+++++++.+..... ..+-+.........+.+.....++.+.
T Consensus 207 ~p~~~~~~~~-d~~--~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~-~~~yl~~~d~t~~GSR~g~~~l~lw~a 281 (380)
T PRK02769 207 LPFVNNPPPF-SFA--DGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISV-DVDYIGSRDQTISGSRNGHTALLLWAA 281 (380)
T ss_pred ecccCccccC-Ccc--CCCCEEEECCcccCC-CCCCcEEEEEehhhhhhccc-CccccCCCCCCccCCCCcHHHHHHHHH
Confidence 31 111111 111 122366779999986 45568999988776421000 000000000000111222333334444
Q ss_pred cCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCe
Q 045431 330 LSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGF 409 (433)
Q Consensus 330 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~ 409 (433)
++..+...+++..++..+..+++.+.|++.|++.......+.+.++.+. .++ . + |..+.+- ++.
T Consensus 282 L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~---~~~----~-~-~w~l~~~-------~~~ 345 (380)
T PRK02769 282 IRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS---ERI----W-K-KWHLATS-------GNQ 345 (380)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC---HHH----H-h-CeeEccc-------CCE
Confidence 4444445678888999999999999999889887765566666666542 121 1 2 5555432 247
Q ss_pred EEEeecc--ChhHHHHHHHHHHHhh
Q 045431 410 IRVSAFG--HRGNVLEACKRFKHLY 432 (433)
Q Consensus 410 iRi~~~~--~~~~l~~~l~~l~~~l 432 (433)
+|++++. +.+.+++.++.|...+
T Consensus 346 ~hi~~~~~~~~~~~~~f~~dl~~~~ 370 (380)
T PRK02769 346 AHIITMPHHNKQQIDSLIDELIFDL 370 (380)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHH
Confidence 9998643 6778999999887654
No 310
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.67 E-value=1.6e-14 Score=137.59 Aligned_cols=317 Identities=12% Similarity=0.090 Sum_probs=185.2
Q ss_pred CCChHHHHHHHHHHHhhcccCCCCCCCCC--CCCCHHHHHHHHHHHhccCCCCC-CcEEEc-CChHHHHHH-HHHhcCCC
Q 045431 75 EPIPEVITSALAKRSYALSTQEGYSGYGA--EQGEKPLRAAIASTFYKDLGIEE-GDIFVS-DGAKCDISR-LQIVFGSN 149 (433)
Q Consensus 75 ~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~la~~l~~~~~~~~-~~i~~~-~G~~~al~~-l~~l~~~g 149 (433)
...|+.+++++.+..... .....+++ ..-..+.|+.+++++ ++++ .+|+++ +|++.++++ +..++.+
T Consensus 12 ~~~~~~v~~a~~~~~~~~---~~~~hr~~~f~~~~~~~r~~l~~l~----~~~~~~~v~f~~gs~T~a~~~~~~~l~~~- 83 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASL---FGTSHRQAPVKNLVGRVREGLAELF----SLPDGYEVILGNGGATAFWDAATFGLIEK- 83 (361)
T ss_pred cCCCHHHHHHHHhcCccc---cccCcCChHHHHHHHHHHHHHHHHh----CCCCCceEEEECCchhHHHHHHHHhcccc-
Confidence 456788888876532110 00112211 234566677777776 7754 478886 559999997 5666643
Q ss_pred CEEEEeCCCChh-hhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHH
Q 045431 150 VTMAVQDPSYPA-YVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLT 228 (433)
Q Consensus 150 d~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~ 228 (433)
+.+++..-.|.. ..+........ .++..++.+... ..+....+++++|.+++.+|.||+..+.++
T Consensus 84 ~~l~i~~G~~~~~~~~~a~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~lV~~~h~et~tG~~~pi~~-- 149 (361)
T TIGR01366 84 KSLHLSFGEFSSKFAKAVKLAPWL----------GEPIIVTADPGS--APEPQADPGVDVIAWAHNETSTGVAVPVRR-- 149 (361)
T ss_pred cccEEecCHHHHHHHHHHHhhhcc----------CCceEEecCCCC--CCCCccCCCCCEEEEcccCCccceeccccc--
Confidence 333333333432 22222221100 123444443322 222233468999999999999999999544
Q ss_pred HHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCc-------
Q 045431 229 RLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF------- 301 (433)
Q Consensus 229 ~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~------- 301 (433)
| ++++|+++|+|.+.+.. ..+..+.. ..+++.|..|.+|.+| .+++++++++.+.+..+
T Consensus 150 -I---~~~~g~~~iVDavqs~g---~~~idv~~------~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~~~~~~~~~ 215 (361)
T TIGR01366 150 -P---EGSDDALVVIDATSGAG---GLPVDIAE------TDVYYFAPQKNFASDG-GLWLAIMSPAALERIEAIAASGRW 215 (361)
T ss_pred -c---cccCCCeEEEEcCcccc---CCCCCHHH------CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhhcccCCCCC
Confidence 4 47899999999998832 11333332 2378899999998764 26777778776522110
Q ss_pred --chhHHHHHHH-----hhccCCCcHH---HHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-Ceeec-CC--
Q 045431 302 --PVAKDFNRIV-----CTCFNGASNI---SQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG-FKVYG-GK-- 367 (433)
Q Consensus 302 --~~~~~~~~~~-----~~~~~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~-~~-- 367 (433)
... .+.... ..+.++++.. +..+++.++...+ .++.+.++.++..+.+.+.+.+.+ +.... ..
T Consensus 216 ~p~~~-d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~g--g~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 292 (361)
T TIGR01366 216 VPEFL-SLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNG--GLDWAVARTADSSSRLYSWAQERPYATPFVTDPGK 292 (361)
T ss_pred Cchhh-hHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence 011 111111 1223333444 2233444444331 247777889999999999999986 44432 11
Q ss_pred -CccEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhhC
Q 045431 368 -NAPYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 368 -~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l~ 433 (433)
......+.++ +.+..++...+ +++||.+.++.. .-+.+.+|+|+ +++.++++.+++.|+++++
T Consensus 293 ~s~~v~~v~~~~g~~~~~v~~~L-~~~gI~i~~~~~--~l~~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 293 RSQVVGTIDFVDDIDAATVAKIL-RANGIVDTEPYR--KLGRNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred cccceEEEECCCccCHHHHHHHH-HHCCCeeccCcc--ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 1122334444 45566666666 455999977642 22356899995 5689999999999998763
No 311
>PRK07480 putative aminotransferase; Validated
Probab=99.67 E-value=3e-14 Score=139.28 Aligned_cols=350 Identities=8% Similarity=0.030 Sum_probs=197.7
Q ss_pred HHHHHHhcCCCCceEEecCCCC--C-CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--T-EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~-~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|.. . -..+|.+.+++.+++.+.......+.+ ..+.+..+|+.+.+..+...+.
T Consensus 39 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~-----~~~~~~~lae~L~~~~p~~~~~ 113 (456)
T PRK07480 39 AEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKT-----THPPAIELAAKLAEVAPPGFNH 113 (456)
T ss_pred ceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccc-----CCHHHHHHHHHHHHhCCCCcCE
Confidence 3334444556778999976642 2 236789999999998764211111122 2344455555554323333468
Q ss_pred EEEcCChHHHHHH-HH--Hhc----C-C-CCEEEEeCCCChhhhhhHHHhCCccc-ccccccccceEEEeecCc------
Q 045431 129 IFVSDGAKCDISR-LQ--IVF----G-S-NVTMAVQDPSYPAYVDSSVIMGQTGE-FQKDAEKYGKIEYMRCTA------ 192 (433)
Q Consensus 129 i~~~~G~~~al~~-l~--~l~----~-~-gd~Vl~~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~------ 192 (433)
+++++++++|... +. ... . + ..+|+...-+|++..-....++.... ....+.....+..++...
T Consensus 114 v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 193 (456)
T PRK07480 114 VFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGG 193 (456)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccccc
Confidence 9999999999875 31 111 1 2 34688888888775422222221110 000111111122222110
Q ss_pred ---cCCc----ccCCC-----C-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 193 ---ENGF----FPDLS-----T-VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 193 ---~~~~----~~~~~-----~-~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
...+ ...++ . ..++.+|+ ..| +.-.|.. .+.+.+++|.++|++||+++|.||++..|...+...
T Consensus 194 ~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi-~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 272 (456)
T PRK07480 194 DMTPEEFGLAAARQLEAKILELGADNVAAFI-GEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF 272 (456)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCcEEEEE-EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh
Confidence 0000 00111 1 13455555 455 5545664 577789999999999999999999998875555433
Q ss_pred cccccCCCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHH----HHHhhccCCCcHHHHHHHHHhcCc
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFN----RIVCTCFNGASNISQAGGLACLSP 332 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~q~~~~~~l~~ 332 (433)
....++-.+| +-+|+|.++ .|. .+|.+++++++. +.+. .+...++++.++++.+++.+.|+.
T Consensus 273 a~~~~gv~PD----iv~~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~ 339 (456)
T PRK07480 273 GSQHFGIKPD----LMTIAKGLT-SGYIPMGAVGVGDRVA--------EVLIEEGGEFNHGFTYSGHPVAAAVALANLRI 339 (456)
T ss_pred hhhhcCCCCC----eeeeehhhc-cCCccceEEEEcHHHH--------HHHhcCCCCcccCCCCCcCHHHHHHHHHHHHH
Confidence 3333332344 336899997 784 899999988874 3331 123445667889999988888863
Q ss_pred CChhHHHHHHHHH-HHHHHHHHHHHhh---cCC-eeecCCCccEEEEECCCC--------C----hHHHHHHHHHcCCeE
Q 045431 333 EGFKAVHEVIGFY-KENTDIIVETFNS---LGF-KVYGGKNAPYVWVQFPGR--------S----SWDVFSEILEKTHVV 395 (433)
Q Consensus 333 ~~~~~~~~~~~~~-~~~~~~l~~~l~~---~g~-~~~~~~~g~~~~~~~~~~--------~----~~~~~~~l~~~~gi~ 395 (433)
... +.+.++. +++.+++.+.|++ +++ .-+.. .|+++-+.+... . ...+...++ ++||.
T Consensus 340 l~~---~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG-~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll 414 (456)
T PRK07480 340 LRD---EGIVERVRDDTGPYLQKRLRELADHPLVGEVRG-VGLVGAIELVKDKATRERFEAGGGVGTICRDHCF-ANGLI 414 (456)
T ss_pred HHh---CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEe-ecceEEEEEeccccccccCcchhhHHHHHHHHHH-HCCcE
Confidence 221 2233344 2444444444443 332 11222 456666666310 1 123334444 55999
Q ss_pred ecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 396 TTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 396 v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+. .+.+||+ +..+++++++++++|.+++
T Consensus 415 ~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al 446 (456)
T PRK07480 415 MRAV-------GDRMIISPPLVITHAEIDELVEKARKAL 446 (456)
T ss_pred Eeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 9652 1468998 4569999999999998876
No 312
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=5.7e-14 Score=133.60 Aligned_cols=214 Identities=10% Similarity=0.097 Sum_probs=141.2
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHH-hCCccccccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVI-MGQTGEFQKDAEKY 182 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~ 182 (433)
+....|.+.||+.- ..+..++++++++|+++ +..++++||+|++....|.+....+.. +...|
T Consensus 62 Pt~~~le~~la~LE------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~G--------- 126 (395)
T PRK08114 62 LTHFSLQEAMCELE------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLG--------- 126 (395)
T ss_pred hhHHHHHHHHHHHh------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcC---------
Confidence 34566777777752 23567777779999996 688899999999999999887766532 22122
Q ss_pred ceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcC--CEEEEeccccccccCCCCCccc
Q 045431 183 GKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNG--SIIVYDSAYALYISDDNPRSIF 260 (433)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~--~~li~De~~~~~~~~~~~~~~~ 260 (433)
.++..++..+...+...+ .+++++|++.+|.||||.+.+ +++|+++|++++ +++++|.+++.-.. ....
T Consensus 127 i~v~~vd~~d~~~l~~~l--~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~----~~pl 197 (395)
T PRK08114 127 VTTTWFDPLIGADIAKLI--QPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL----FKAL 197 (395)
T ss_pred cEEEEECCCCHHHHHHhc--CCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----cCHH
Confidence 366666543222222112 257899999999999999988 889999999984 99999999974111 1111
Q ss_pred ccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHH
Q 045431 261 EIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVH 339 (433)
Q Consensus 261 ~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 339 (433)
.+ +-.+++.|.+|.++-++ .-.|.++.+++.. +.+...........++.... +...+.+.+.
T Consensus 198 ~~----GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~--------~~l~~~~~~~G~~~~p~~a~-----l~~rgl~TL~ 260 (395)
T PRK08114 198 DF----GIDISIQAGTKYLVGHSDAMIGTAVANARCW--------EQLRENSYLMGQMVDADTAY-----MTSRGLRTLG 260 (395)
T ss_pred Hc----CCcEEEEcCcccccCCCcceeEEEEcCHHHH--------HHHHHHHHhccCCCCHHHHH-----HHHcCCCcHH
Confidence 22 23499999999876443 5678777665542 33433332222233333322 2223445567
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 045431 340 EVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 340 ~~~~~~~~~~~~l~~~l~~~ 359 (433)
-+.++..++...+.+.|+++
T Consensus 261 lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 261 VRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 77788889999999999987
No 313
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=4.9e-14 Score=137.90 Aligned_cols=351 Identities=11% Similarity=0.095 Sum_probs=199.8
Q ss_pred HHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-C-
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-E- 126 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~- 126 (433)
..+......+++..||+..|.-. -..+|.+.+++.+++.+.. ..... .-..+.+..+|+.+....+.. .
T Consensus 47 a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~---~~~~~---~~~~~~~~~lAe~L~~~~p~~~~~ 120 (459)
T PRK06931 47 AQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGL---PLHTL---DLTTPLKDAFSEYLLSLLPGQGKE 120 (459)
T ss_pred ccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhc---ccccc---ccCCHHHHHHHHHHHHhCCCcccc
Confidence 34444555677889999777532 2467899999999886421 01110 012355555666654322211 1
Q ss_pred -CcEEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHhCCc-ccccccccccceEEEeecCcc-----C--
Q 045431 127 -GDIFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEKYGKIEYMRCTAE-----N-- 194 (433)
Q Consensus 127 -~~i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~-----~-- 194 (433)
..+++++++++|... + .......++|+..+.+|++........+.. .....++.....+..++.... +
T Consensus 121 ~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK06931 121 YCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIG 200 (459)
T ss_pred ceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 234666777888775 3 222344568888999998876555433221 111111111122333332210 0
Q ss_pred ---Ccc------cC-CC----CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 195 ---GFF------PD-LS----TVARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 195 ---~~~------~~-~~----~~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
+.. .+ ++ ...++.+|+ .-| +.-.|.. .+.+.++++.++|++||+++|.||+..+|...|....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI-~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a 279 (459)
T PRK06931 201 GEAGVKALTYYFENFIEDVESGVRKPAAVI-LEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFA 279 (459)
T ss_pred chhHHHHHHHHHHHHHHhhhcCCCceEEEE-EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHH
Confidence 000 00 01 012345544 456 4444654 5788999999999999999999999998865554332
Q ss_pred ccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 259 IFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
...+.-.+| +-+++|.++ .|+.+|.+++++.+ +.+......++.+.++++.+++.+.|+....
T Consensus 280 ~~~~gv~PD----ivt~gK~l~-gG~Pi~av~~~~~~---------~~~~~~~~~~T~~gnpla~aaala~L~~l~~--- 342 (459)
T PRK06931 280 FEHAGIEPD----IIVMSKAVG-GGLPLAVLGIKKEF---------DAWQPGGHTGTFRGNQLAMATGLTTLKILKE--- 342 (459)
T ss_pred hhhcCCCCC----EEEeccccc-CCcceeeeeeHHHH---------hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 222332345 236799998 89999988876543 2222223455667889999888888763221
Q ss_pred HHHHHHHHHHHHHHHHHHhh----cCC-eeecCCCccEEEEECCCC------------C---hHHHHHHHHHcCCeEecC
Q 045431 339 HEVIGFYKENTDIIVETFNS----LGF-KVYGGKNAPYVWVQFPGR------------S---SWDVFSEILEKTHVVTTP 398 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~----~g~-~~~~~~~g~~~~~~~~~~------------~---~~~~~~~l~~~~gi~v~~ 398 (433)
+...++.++.-+++.+.|++ +++ .-+. ..|.++.+.+... + ...+...++ ++||.+.+
T Consensus 343 ~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr-G~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~ 420 (459)
T PRK06931 343 ENLAQNAAERGEWLKAQLAELQKRYPCIGNVR-GRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLER 420 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEe-cCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEee
Confidence 23344455555555555544 332 1122 2456666666311 0 123344444 45999976
Q ss_pred CCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 399 GSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 399 g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.. ..+.+|+. +..+++++++++++|.+++
T Consensus 421 ~~~----~~~~l~~~Ppl~it~~eid~~~~~l~~~l 452 (459)
T PRK06931 421 GGR----NGNVVRLLPPLLITQAECEEFIDRFEQAL 452 (459)
T ss_pred cCC----CCCEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 422 23678887 5679999999999998876
No 314
>PRK12403 putative aminotransferase; Provisional
Probab=99.66 E-value=3.4e-14 Score=139.24 Aligned_cols=350 Identities=10% Similarity=0.064 Sum_probs=193.2
Q ss_pred HHHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
+.++......+++..||+..|.- .+ ..+|.+.+++.+++.+... ...+ ..+..+....+++.+....+...+
T Consensus 42 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~---~~~~--~~~~~~~~~~lae~L~~~~p~~~~ 116 (460)
T PRK12403 42 RGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY---YNMF--FHTTHPAVIELSELLFSLLPGHYS 116 (460)
T ss_pred eceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCC---eecc--cccCCHHHHHHHHHHHHhCCCCcC
Confidence 34444455567778999866532 12 3679999999999986431 1111 012233444444444332233346
Q ss_pred cEEEcCChHHHHHHHHHhc--------CCCCE-EEEeCCCChhhhh-hHHHhCCcccccccccccceEEEeecCc----c
Q 045431 128 DIFVSDGAKCDISRLQIVF--------GSNVT-MAVQDPSYPAYVD-SSVIMGQTGEFQKDAEKYGKIEYMRCTA----E 193 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l~--------~~gd~-Vl~~~p~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~ 193 (433)
.+++++++++|......+. ++++. |+....+|++... .....+.. .+...+.....+..+|... .
T Consensus 117 ~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~-~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 117 HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMK-FMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCc-cccccCCCCCCCEEeCCCcccccc
Confidence 8999999999988632222 23333 4455667766532 22222211 1111111111122222110 0
Q ss_pred CCc---------ccCCC----C--CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Q 045431 194 NGF---------FPDLS----T--VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNP 256 (433)
Q Consensus 194 ~~~---------~~~~~----~--~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~ 256 (433)
.+. ..+++ . ..++.+ ++..| +.-.|.+ .+.+.+++|.++|++||+++|.||++..|...|..
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaa-vI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~ 274 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAG-FVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEW 274 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh
Confidence 000 00111 1 123444 44566 4555754 47789999999999999999999999877655543
Q ss_pred CcccccCCCCcceEEEeccccccccccc-ceeeeeccccccccCCcchhHHHHH----HHhhccCCCcHHHHHHHHHhcC
Q 045431 257 RSIFEIPGAKEVAIETSSFSKYAGFTGV-RLGWTVIPKELLFSDGFPVAKDFNR----IVCTCFNGASNISQAGGLACLS 331 (433)
Q Consensus 257 ~~~~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~ 331 (433)
.....++-.+| ++ +++|.++ .|. .+|.+++++++. +.+.. +...++.+.++++.+++.+.|+
T Consensus 275 ~a~e~~gv~PD-iv---~~gK~lg-gG~~Piga~v~~~~i~--------~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~ 341 (460)
T PRK12403 275 FAHEHFGFEPD-TL---SIAKGLT-SGYVPMGGLVLSKRIA--------EALVEQGGVFAHGLTYSGHPVAAAVAIANLK 341 (460)
T ss_pred hhhhhcCCCCC-eE---EEccccc-ccccceEEEEECHHHH--------HHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 32222322244 23 4899998 884 999988887764 33321 1234455678888888888876
Q ss_pred cCChhHHHHHHHHHH-HHHHHHHHHHhh----cCC-eeecCCCccEEEEECCC--C-----C-----hHHHHHHHHHcCC
Q 045431 332 PEGFKAVHEVIGFYK-ENTDIIVETFNS----LGF-KVYGGKNAPYVWVQFPG--R-----S-----SWDVFSEILEKTH 393 (433)
Q Consensus 332 ~~~~~~~~~~~~~~~-~~~~~l~~~l~~----~g~-~~~~~~~g~~~~~~~~~--~-----~-----~~~~~~~l~~~~g 393 (433)
.... +.+.++.+ ++-+++.+.|++ +++ .-+. ..|.++.+.+.. . . ...+...++ +.|
T Consensus 342 ~i~~---~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G 416 (460)
T PRK12403 342 ALRD---EGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQ-GAGLVAALQFAEDKATRKRFANENDLAWRCRTIGF-EEG 416 (460)
T ss_pred HHHh---ccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ecceEEEEEEccCccccccccchhHHHHHHHHHHH-hCC
Confidence 3221 22344443 455555555543 332 1122 256666666631 1 1 011223334 459
Q ss_pred eEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 394 VVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 394 i~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
+.+.+. .+.+|++ +..++++++++++.|.+++
T Consensus 417 ll~~~~-------~~~~~l~Ppl~it~~eid~~~~~l~~al 450 (460)
T PRK12403 417 VIIRST-------LGRMIMAPALVAGRAEIDELVDKTRIAV 450 (460)
T ss_pred EEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 999752 1358888 4569999999999999876
No 315
>PRK07036 hypothetical protein; Provisional
Probab=99.66 E-value=2.7e-13 Score=133.01 Aligned_cols=350 Identities=11% Similarity=0.073 Sum_probs=201.6
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
..+......+++..||+..|.. .+ ..+|.+.+++.+++.+.. ....+. ....+.+..+|+.+....+...+.
T Consensus 40 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~---~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~ 114 (466)
T PRK07036 40 AEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLP---YYTPFG--DMTNAPAAELAAKLAELAPGDLNH 114 (466)
T ss_pred CceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCc---cccccc--ccCCHHHHHHHHHHHHhCCCCcCE
Confidence 3444455567788999977642 22 367899999999987532 111111 012344555666654422333468
Q ss_pred EEEcCChHHHHHHHHHhc-------C-C-CCEEEEeCCCChhhhhhHHHhCCcc-cccccccccceEEEeecCcc----C
Q 045431 129 IFVSDGAKCDISRLQIVF-------G-S-NVTMAVQDPSYPAYVDSSVIMGQTG-EFQKDAEKYGKIEYMRCTAE----N 194 (433)
Q Consensus 129 i~~~~G~~~al~~l~~l~-------~-~-gd~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~----~ 194 (433)
+++++++++|+.....+. . + ..+|+..+-+|++............ ....+......+..++.... .
T Consensus 115 v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 194 (466)
T PRK07036 115 VFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPA 194 (466)
T ss_pred EEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccccc
Confidence 999999999988632221 1 2 3678888888888653332222111 11111111111222222110 0
Q ss_pred C-----cc----cCCC------CCCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 195 G-----FF----PDLS------TVARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 195 ~-----~~----~~~~------~~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
+ +. ..++ ...++.+|+ ..| +.-.|.. .+++.+++|.++|++||+++|.||++..|...|...
T Consensus 195 ~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi-~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 273 (466)
T PRK07036 195 GMSEAAFCDFLVDEFEDKILSLGADNIAAFI-AEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF 273 (466)
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCceEEEE-EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh
Confidence 0 00 0011 113455544 455 5555664 578899999999999999999999998775555433
Q ss_pred ccc-ccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHH-------HHhhccCCCcHHHHHHHHH
Q 045431 258 SIF-EIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNR-------IVCTCFNGASNISQAGGLA 328 (433)
Q Consensus 258 ~~~-~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~ 328 (433)
... .+.-.+| +-+++|.++ .| +.+|.+++++++. +.+.. +...++.+.++++.+++.+
T Consensus 274 ~~~~~~gv~PD----ivt~gK~l~-gG~~Pi~av~~~~~i~--------~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a 340 (466)
T PRK07036 274 ASEAVFGIQPD----IITFAKGLT-SGYQPLGAVIISERLL--------DVISGPNAKGNVFTHGFTYSGHPVACAAALK 340 (466)
T ss_pred hhhhhcCCCCC----EEEEccccc-cCccccEEEEEcHHHH--------HHHhcccCcCcccccCCCCCCCHHHHHHHHH
Confidence 222 1222344 336899997 88 5999999998874 33321 2233456678999888888
Q ss_pred hcCcCChhHHHHHHHHHHHHHHHHHHHHhhc---CC-eeecCCCccEEEEECCCC--------C----hHHHHHHHHHcC
Q 045431 329 CLSPEGFKAVHEVIGFYKENTDIIVETFNSL---GF-KVYGGKNAPYVWVQFPGR--------S----SWDVFSEILEKT 392 (433)
Q Consensus 329 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g~-~~~~~~~g~~~~~~~~~~--------~----~~~~~~~l~~~~ 392 (433)
.|+.... +++.+..+++.+++.+.|+++ ++ .-+. ..|.++.+.+... . ...+...++ ++
T Consensus 341 ~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vr-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 415 (466)
T PRK07036 341 NIEIMER---EGLCEHVREVGPYFEERLASLRELPLVGDVR-GDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQ-ER 415 (466)
T ss_pred HHHHHHh---CCHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eeceEEEEEEccCccccCCCCchhHHHHHHHHHHH-HC
Confidence 8763221 234445555556665555543 22 1122 2456666776311 0 123444444 55
Q ss_pred CeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 393 HVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 393 gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
||.+.+. + +.+|++ +..+++++++++++|.+++
T Consensus 416 Gvl~~~~------~-~~~~l~Ppl~it~~~id~~~~~l~~al 450 (466)
T PRK07036 416 GLLVRPL------E-HLCVLSPPLIITRAQIDEIVAILRAAI 450 (466)
T ss_pred CcEEeec------C-CEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 9999753 1 468888 5679999999999998775
No 316
>PRK07046 aminotransferase; Validated
Probab=99.66 E-value=9.6e-14 Score=135.50 Aligned_cols=340 Identities=13% Similarity=0.049 Sum_probs=191.8
Q ss_pred HHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD 128 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~ 128 (433)
.++......+++..||+..|... + ..+|.+.+++.+++.+.. ...+ + .+....+|+.+.+..+ .+.
T Consensus 64 a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~----~~~~-~----~~~~~~lAe~l~~~~~--~~~ 132 (453)
T PRK07046 64 ARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGL----TTML-P----SEDAAWVGEELARRFG--LPY 132 (453)
T ss_pred eeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCC----CCCC-C----CHHHHHHHHHHHHHhC--CCE
Confidence 34444455667889999766532 2 367899999999987521 1222 2 2444455555544333 579
Q ss_pred EEEcCChHHHHHH-H--HHhcCCCCEEEEeCCCChhhhhhHHHh--CCcccccc--ccc---ccceEEEeecCccCCccc
Q 045431 129 IFVSDGAKCDISR-L--QIVFGSNVTMAVQDPSYPAYVDSSVIM--GQTGEFQK--DAE---KYGKIEYMRCTAENGFFP 198 (433)
Q Consensus 129 i~~~~G~~~al~~-l--~~l~~~gd~Vl~~~p~~~~~~~~~~~~--g~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~ 198 (433)
+.+++++++|... + .......++|+..+-+|++........ +....... .+. ....+..++.++...+..
T Consensus 133 v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~ 212 (453)
T PRK07046 133 WQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEA 212 (453)
T ss_pred EEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHH
Confidence 9999999999875 3 222344578888888898864322211 10000000 000 001223333322111111
Q ss_pred CCCCCCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCcccccCCCCcceEEEecc
Q 045431 199 DLSTVARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISD-DNPRSIFEIPGAKEVAIETSSF 275 (433)
Q Consensus 199 ~~~~~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~vi~i~S~ 275 (433)
.+. ..++.+|+ ..| +.-.|. ..+.+.++++.++|++||+++|.||+.. |..+ +... ..++-.+| ++ ++
T Consensus 213 ~l~-~~~vAavi-~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PD-i~---t~ 283 (453)
T PRK07046 213 ALA-DGDVAAVL-AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPD-FL---VV 283 (453)
T ss_pred HhC-CCCeEEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCcc-ce---ee
Confidence 111 23455544 466 333454 4466799999999999999999999987 4221 1111 11222244 22 68
Q ss_pred cccccccccceeeeeccccccccCCcchhHHHHH---------HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHH
Q 045431 276 SKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNR---------IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYK 346 (433)
Q Consensus 276 sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 346 (433)
+|.+| .|+.+|.++++++++ +.+.. ....++.+.++++.+++.+.|+.... ++..++.+
T Consensus 284 gK~lg-gG~Pi~av~g~~~i~--------~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~ 351 (453)
T PRK07046 284 GKPIA-GGVPCAVYGFSAELA--------ERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT---EAAYAHML 351 (453)
T ss_pred hhhhc-CCCcceeeeehHHHH--------HHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHH
Confidence 99998 899999999988874 33321 11233556788888888888763211 12233444
Q ss_pred HHHHHHHHHH----hhcCCee-ecCCCccEEEEECC-C-C----------C---hHHHHHHHHHcCCeEecCCCCCCCCC
Q 045431 347 ENTDIIVETF----NSLGFKV-YGGKNAPYVWVQFP-G-R----------S---SWDVFSEILEKTHVVTTPGSGFGPGG 406 (433)
Q Consensus 347 ~~~~~l~~~l----~~~g~~~-~~~~~g~~~~~~~~-~-~----------~---~~~~~~~l~~~~gi~v~~g~~f~~~~ 406 (433)
+.-+.+.+.| .++++.+ +...+ ..+.+.+. + . + ...+...+++ +||.+.|.
T Consensus 352 ~~g~~l~~~L~~l~~~~~~~~~v~g~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~------- 422 (453)
T PRK07046 352 ALAARLAAGLRAVIARHGLPWHVTRVG-ARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLITPF------- 422 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEeC-cEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEecc-------
Confidence 4444444444 4455432 22223 33344431 1 0 1 1223444444 59999762
Q ss_pred CCeEEEeeccChhHHHHHHHHHHHhh
Q 045431 407 EGFIRVSAFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 407 ~~~iRi~~~~~~~~l~~~l~~l~~~l 432 (433)
.+.++++...+++|++++++++.+++
T Consensus 423 ~~~~~~~p~~t~~did~~~~~~~~~l 448 (453)
T PRK07046 423 HNMMLVCPATTAADVDRLVAAFDACL 448 (453)
T ss_pred cCcEEEeCCCCHHHHHHHHHHHHHHH
Confidence 13578887789999999999998876
No 317
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.65 E-value=1.6e-14 Score=140.21 Aligned_cols=351 Identities=7% Similarity=-0.018 Sum_probs=192.5
Q ss_pred HHHHHHHhcCCCCceEEecCCCCC--C-CChHHHHHHHHHH-HhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCC
Q 045431 51 RRKAAHMLKYPDAEVISLGIGDTT--E-PIPEVITSALAKR-SYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEE 126 (433)
Q Consensus 51 ~~~~~~~~~~~~~~~i~l~~g~~~--~-~~~~~~~~a~~~~-~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~ 126 (433)
+..+......+++..||+..|... + ..++.+.+++.++ ..... .....|. .....+|-+.+++.+.+..+-+.
T Consensus 46 ~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l--~~~~~~~-~~~~~~la~~l~~~l~~~~p~~~ 122 (464)
T TIGR00699 46 KSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTL--INRPALG-NFPSKDWAKILKEGILKVAPKGQ 122 (464)
T ss_pred ecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhh--cccccCC-cHHHHHHHHHHHHhHHhhCCCCc
Confidence 344444556677889999877542 2 3689999999984 22110 1112232 11223344444332222122234
Q ss_pred CcEEEcCChHHHHHHHHHhc----C-----------------------C---CCEEEEeCCCChhhhhhHHHhCCccccc
Q 045431 127 GDIFVSDGAKCDISRLQIVF----G-----------------------S---NVTMAVQDPSYPAYVDSSVIMGQTGEFQ 176 (433)
Q Consensus 127 ~~i~~~~G~~~al~~l~~l~----~-----------------------~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~ 176 (433)
+.+++++++++|.+....+. . + ..+|+....+|++.............+.
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 78999999999998632221 0 1 1268889999988654433332111000
Q ss_pred ccccccceEEEeecCcc----CCc-----------ccCCC----C-CCCccEEEEcCC-CCccccCC-CHHHHHHHHHHH
Q 045431 177 KDAEKYGKIEYMRCTAE----NGF-----------FPDLS----T-VARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFA 234 (433)
Q Consensus 177 ~~~~~~~~~~~~~~~~~----~~~-----------~~~~~----~-~~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a 234 (433)
..+........+|.... ... ...++ . ..++.+|+ ..| +.-.|... +.+.+++|.++|
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI-~EPv~g~~G~~~~~~~yl~~lr~lc 281 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAII-VEPIQSEGGDNHASPDFFRKLRDIT 281 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEE-EeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 00100011122222100 000 00011 1 13455555 456 55567666 788999999999
Q ss_pred HHcCCEEEEeccccccccCCCCCcccccCC--CCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHh
Q 045431 235 KDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVC 312 (433)
Q Consensus 235 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~ 312 (433)
++||+++|.||++..+...|.......++- .+| +.+++|.+| .| |+++.++ .+ ........
T Consensus 282 ~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PD----i~t~gK~lg-~g---G~~~~~~-~~--------~~~~~~~~ 344 (464)
T TIGR00699 282 KKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPD----MVTFSKKFQ-TA---GYFFHDP-AF--------RPNKPYRQ 344 (464)
T ss_pred HHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCC----EEEehhhhc-cC---Cccccch-hc--------cCCCCccc
Confidence 999999999999987755443322222221 144 346899985 33 4443332 21 11111234
Q ss_pred hccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC--Ce----eec-CCCccEEEEECCCCC-hHHH
Q 045431 313 TCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG--FK----VYG-GKNAPYVWVQFPGRS-SWDV 384 (433)
Q Consensus 313 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g--~~----~~~-~~~g~~~~~~~~~~~-~~~~ 384 (433)
.++.+.++++.+++.+.|+.... +++.++.+++-+++.+.|+++. +. -+. ...|+++-+.++... ...+
T Consensus 345 ~~T~~gnp~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i 421 (464)
T TIGR00699 345 FNTWMGDPSRALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKL 421 (464)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHH
Confidence 45666788888887777652211 3344455555566666665531 22 121 125677777776322 3445
Q ss_pred HHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 385 FSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 385 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
...+++ +||.+.+. +.+.+||. +..+++++++++++|.+++
T Consensus 422 ~~~~~~-~Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 422 LKKARN-NGVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHH-CCcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 555555 59999753 34679999 5679999999999998864
No 318
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.7e-13 Score=128.44 Aligned_cols=216 Identities=19% Similarity=0.212 Sum_probs=145.5
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCc-ccccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEK 181 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~ 181 (433)
.+....|.+.++++- ..++.+.++++.+|+.. +..++++||+|++.+..|.+....+.....+ +
T Consensus 62 nPT~~~lE~~~a~LE------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~g-------- 127 (396)
T COG0626 62 NPTRDALEEALAELE------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFG-------- 127 (396)
T ss_pred CccHHHHHHHHHHhh------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcC--------
Confidence 456678888888762 45788899999999997 7999999999999999999877666554322 2
Q ss_pred cceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc
Q 045431 182 YGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE 261 (433)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~ 261 (433)
.++.+++..........+.. +++++|++-+|.|||-.+.+ +++|+++|+++|+.+|+|++|+.-.+.. | + .
T Consensus 128 -i~~~~~d~~~~~~~~~~~~~-~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~-P--L-~ 198 (396)
T COG0626 128 -VEVTFVDPGDDEALEAAIKE-PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR-P--L-E 198 (396)
T ss_pred -eEEEEECCCChHHHHHHhcc-cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC-h--h-h
Confidence 25555543322111111111 58999999999999988777 8999999999999999999998533221 1 1 1
Q ss_pred cCCCCcceEEEecccccccccccc--eeeeeccccccccCCcchhHHHHHHHh-hccCCCcHHHHHHHHHhcCcCChhHH
Q 045431 262 IPGAKEVAIETSSFSKYAGFTGVR--LGWTVIPKELLFSDGFPVAKDFNRIVC-TCFNGASNISQAGGLACLSPEGFKAV 338 (433)
Q Consensus 262 ~~~~~~~vi~i~S~sK~~~~~G~r--~G~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~ 338 (433)
+ +-.|++.|.+|.++ ..-. .|.++++++.+ .+.+..... ......++.....+ + .+.+.+
T Consensus 199 ~----GaDIVvhSaTKyl~-GHsDvl~G~v~~~~~~~-------~~~~~~~~~~~~G~~l~p~dA~l~---l--RGlkTL 261 (396)
T COG0626 199 L----GADIVVHSATKYLG-GHSDVLGGVVLTPNEEL-------YELLFFAQRANTGAVLSPFDAWLL---L--RGLRTL 261 (396)
T ss_pred c----CCCEEEEecccccc-CCcceeeeEEecChHHH-------HHHHHHHHHhhcCCCCCHHHHHHH---H--hccchH
Confidence 1 22499999999986 4333 46666666664 233322222 22233344433222 2 344556
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 045431 339 HEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 339 ~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.-+.++..++...+.+.|+++
T Consensus 262 ~~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 262 ALRMERHNENALKIAEFLADH 282 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 777788888899999999986
No 319
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.65 E-value=3e-16 Score=148.07 Aligned_cols=224 Identities=14% Similarity=0.185 Sum_probs=133.0
Q ss_pred CCCCCCCC-HHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccc
Q 045431 100 GYGAEQGE-KPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK 177 (433)
Q Consensus 100 ~Y~~~~g~-~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 177 (433)
+...+.|. .+..+.+|+.+ |.+ ...++++|++.++.+ +.++++|||+|+++..||.++...+.+.|..+
T Consensus 60 ~L~~p~G~I~eAe~~aA~~f----GAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~P---- 130 (417)
T PF01276_consen 60 DLHDPEGIIKEAEELAARAF----GAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIP---- 130 (417)
T ss_dssp BTTTTBTHHHHHHHHHHHHH----TES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEE----
T ss_pred cccCCccHHHHHHHHHHHhc----CCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeE----
Confidence 33344444 45555555554 543 568899999999987 79999999999999999999999999999644
Q ss_pred cccccceEEEeecCcc-CC----ccc-----C-----CCCCCCccE---EEEcCCCCccccCCCHHHHHHHHHHHHHcCC
Q 045431 178 DAEKYGKIEYMRCTAE-NG----FFP-----D-----LSTVARTDI---IFFCSPNNPTGAAATREQLTRLVQFAKDNGS 239 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~-~~----~~~-----~-----~~~~~~~~~---i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~ 239 (433)
++++...+ .+ +.. + +++.+..++ ++|++|++ .|++++ +++|+++|+++++
T Consensus 131 --------vyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~ 198 (417)
T PF01276_consen 131 --------VYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGI 198 (417)
T ss_dssp --------EEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTEC
T ss_pred --------EEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCC
Confidence 33333211 11 111 1 122344444 99999976 899988 8999999999999
Q ss_pred EEEEeccccc-cccCCCCCcccccCC---CCcceEEEecccccccccccc-eeeeeccccc-cccCCcchhHHHHHHHhh
Q 045431 240 IIVYDSAYAL-YISDDNPRSIFEIPG---AKEVAIETSSFSKYAGFTGVR-LGWTVIPKEL-LFSDGFPVAKDFNRIVCT 313 (433)
Q Consensus 240 ~li~De~~~~-~~~~~~~~~~~~~~~---~~~~vi~i~S~sK~~~~~G~r-~G~l~~~~~~-~~~~~~~~~~~~~~~~~~ 313 (433)
+|++||+|+. +.|.+-+.+...+.. ....++++-|.+|++ +++. .+++....+. +. .+++++....
T Consensus 199 ~llvDEAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~------~~~~~~~l~~ 270 (417)
T PF01276_consen 199 PLLVDEAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVD------HERVNEALSM 270 (417)
T ss_dssp EEEEE-TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTT------HHHHHHHHHH
T ss_pred EEEEEccccccccCCCCccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCccc------HHHHHHHHHH
Confidence 9999999985 555532333332211 124679999999998 5665 5677777764 31 2444443322
Q ss_pred ccCCCcHH----HHHHHHHhcC-cCChhHHHHHHHHHHHHHHHHHHHH
Q 045431 314 CFNGASNI----SQAGGLACLS-PEGFKAVHEVIGFYKENTDIIVETF 356 (433)
Q Consensus 314 ~~~~~~~~----~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~l~~~l 356 (433)
...+++.. +..++.+.++ ..+ +++.+...++.+.+++.+
T Consensus 271 ~~TTSPSY~lmASlD~a~~~m~~~~G----~~l~~~~i~~a~~~R~~i 314 (417)
T PF01276_consen 271 HQTTSPSYPLMASLDVARAQMEEEEG----RELLEEAIELAEEFRKKI 314 (417)
T ss_dssp HS-SS--HHHHHHHHHHHHHHSHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HcCCChHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHH
Confidence 22222222 2333334442 222 444555556666666666
No 320
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.65 E-value=2.4e-13 Score=128.96 Aligned_cols=298 Identities=12% Similarity=0.105 Sum_probs=182.4
Q ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH-HHhcCCCCEEEEeCCCChhhhhh-HHHhCCcccccc
Q 045431 100 GYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL-QIVFGSNVTMAVQDPSYPAYVDS-SVIMGQTGEFQK 177 (433)
Q Consensus 100 ~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l-~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~ 177 (433)
.|..+....+|.+++++++ |. +.++.|++++.|+.++ ...++|||.| +.|+|...... +...|.
T Consensus 66 ~yag~~s~~~lE~~va~~~----G~--~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Ga------ 131 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELY----GF--KYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGA------ 131 (450)
T ss_pred hhcCCCcHHHHHHHHHHHH----CC--CeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCe------
Confidence 5877888999999999997 54 5799999999998875 4557999977 77777554443 566663
Q ss_pred cccccceEEEeecC---------c-cCCcccC-CCC--C----CCccEEEEcCCCCc-cccCCCHHHHHHHHHHHHHcCC
Q 045431 178 DAEKYGKIEYMRCT---------A-ENGFFPD-LST--V----ARTDIIFFCSPNNP-TGAAATREQLTRLVQFAKDNGS 239 (433)
Q Consensus 178 ~~~~~~~~~~~~~~---------~-~~~~~~~-~~~--~----~~~~~i~l~~p~nP-tG~~~~~~~~~~i~~~a~~~~~ 239 (433)
..+-++.+ + .+.++++ +++ . .++++|.+.+++|- .|.++|.+++++|.++|++||+
T Consensus 132 ------v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl 205 (450)
T TIGR02618 132 ------TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGI 205 (450)
T ss_pred ------EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCC
Confidence 22222211 1 1122221 111 1 24557788888884 5899999999999999999999
Q ss_pred EEEEecccccc--cc----C-C-CCCccc----ccCCCCcceEEEeccccccccc-ccceeeeeccccccccCCcchhHH
Q 045431 240 IIVYDSAYALY--IS----D-D-NPRSIF----EIPGAKEVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKD 306 (433)
Q Consensus 240 ~li~De~~~~~--~~----~-~-~~~~~~----~~~~~~~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~ 306 (433)
.||+|.+...- .+ + + ...++. ++....| .+..|..|..+.+ | |+++.+++.+ .++
T Consensus 206 ~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD--~~~~S~~Kd~~~~~G---G~l~~~d~~l-------~~k 273 (450)
T TIGR02618 206 KVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD--GCTMSGKKDCLVNIG---GFLCMNDDEM-------FQS 273 (450)
T ss_pred EEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc--EEEEeeccCCCCCCc---eEEEeCCHHH-------HHH
Confidence 99999998741 11 1 1 123342 2111122 4678899988655 4 7777555543 244
Q ss_pred HHHHHhh--cc--C-CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC----
Q 045431 307 FNRIVCT--CF--N-GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP---- 377 (433)
Q Consensus 307 ~~~~~~~--~~--~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~---- 377 (433)
.++.... .. . +.+.-...+....|.+... +...++-....++|.+.|.+.|+.+..|.+|..++++..
T Consensus 274 ~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lp 350 (450)
T TIGR02618 274 AKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLP 350 (450)
T ss_pred HHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCC
Confidence 4443211 11 1 1122222222223331111 122222333567888899888999988889999988753
Q ss_pred C-----CChHHHHHHHHHcCCeEecC-CCC-CC--CCC-------CCeEEEeec---cChhHHHHHHHHHHHhh
Q 045431 378 G-----RSSWDVFSEILEKTHVVTTP-GSG-FG--PGG-------EGFIRVSAF---GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 378 ~-----~~~~~~~~~l~~~~gi~v~~-g~~-f~--~~~-------~~~iRi~~~---~~~~~l~~~l~~l~~~l 432 (433)
+ .....+..+|..+.||.-.- |+. ++ +.+ -..+|+++- -|.+.++...++|..+.
T Consensus 351 h~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~ 424 (450)
T TIGR02618 351 HIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLY 424 (450)
T ss_pred CCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHH
Confidence 2 24556777777777876532 222 11 110 247999962 37888888888887654
No 321
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.65 E-value=1.2e-13 Score=133.49 Aligned_cols=331 Identities=10% Similarity=0.005 Sum_probs=198.2
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-C-CcEEE--cCChHHHHHH-HHHhc----
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-E-GDIFV--SDGAKCDISR-LQIVF---- 146 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~-~~i~~--~~G~~~al~~-l~~l~---- 146 (433)
++.+.+.+.+...+... ..++.......++.+.+.+|+.+.++++ + +++.. |+|++++..+ +....
T Consensus 52 ~~~p~~~~~~~~~l~~~-----~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~ 126 (431)
T TIGR01788 52 WMEPEARKLMDETINKN-----MIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWR 126 (431)
T ss_pred CCCHHHHHHHHHHHhcC-----CCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHH
Confidence 34566778888877531 1122223344578788888887766776 3 46655 8999999875 43221
Q ss_pred ----CC-----CCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccC-CcccC-CCC--CCCccEEEEcC
Q 045431 147 ----GS-----NVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN-GFFPD-LST--VARTDIIFFCS 213 (433)
Q Consensus 147 ----~~-----gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~--~~~~~~i~l~~ 213 (433)
.. ...|++.+-.|++....++.+| .++..+++++++ ..+.+ +++ .+++.+|+++.
T Consensus 127 ~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg------------~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~ 194 (431)
T TIGR01788 127 KRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFD------------VELREVPMDPGRYVIDPEQVVEAVDENTIGVVCIL 194 (431)
T ss_pred HHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcC------------ceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEe
Confidence 11 2368889999999988888888 478888887632 22222 222 25678888889
Q ss_pred CCCccccCCCHHHHHHHHHHHHHc------CCEEEEeccccccc----cCCCCCcccccCCCCcceEEEecccccccccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDN------GSIIVYDSAYALYI----SDDNPRSIFEIPGAKEVAIETSSFSKYAGFTG 283 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~------~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G 283 (433)
.+|.||.+.| +++|.++|+++ ++++.+|.+|+.+. ....+..+. .. .-..+.-|.+|++ +..
T Consensus 195 g~t~tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~---~~DSis~s~HK~~-~~P 266 (431)
T TIGR01788 195 GTTYTGEYED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LP---RVKSINVSGHKYG-LVY 266 (431)
T ss_pred CCCCCcccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CC---CceEEEECchhcc-CCC
Confidence 9999999988 78888888899 99999999999533 221122221 21 1224566899987 234
Q ss_pred cceeeeeccccc-cccCCcchhHHHHHHHhhccCCCcHHH-H-HHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-
Q 045431 284 VRLGWTVIPKEL-LFSDGFPVAKDFNRIVCTCFNGASNIS-Q-AGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL- 359 (433)
Q Consensus 284 ~r~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 359 (433)
..+|++++++.. +........+.+...........+... . ......+...+...+++..++..+..+++.+.|++.
T Consensus 267 ~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~ 346 (431)
T TIGR01788 267 PGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLG 346 (431)
T ss_pred CCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 448998887652 100000000000000000001111111 1 111222222333567888888999999999999988
Q ss_pred CCeeecC-CCccEEEEECCC-----CChHHHHHHHHHcCCeEecCCCCC-CCCCCCeEEEeec--cChhHHHHHHHHHHH
Q 045431 360 GFKVYGG-KNAPYVWVQFPG-----RSSWDVFSEILEKTHVVTTPGSGF-GPGGEGFIRVSAF--GHRGNVLEACKRFKH 430 (433)
Q Consensus 360 g~~~~~~-~~g~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~f-~~~~~~~iRi~~~--~~~~~l~~~l~~l~~ 430 (433)
++++..+ .....+.+++.+ .+..++.+.|. +.|+.+..-..- ...+..++|+++. .+.+.+++.++.|+.
T Consensus 347 ~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 347 PFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred CEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 5888765 345556677653 34456666655 459875321110 0123456899974 367788888888877
Q ss_pred hh
Q 045431 431 LY 432 (433)
Q Consensus 431 ~l 432 (433)
++
T Consensus 426 ~~ 427 (431)
T TIGR01788 426 AL 427 (431)
T ss_pred HH
Confidence 64
No 322
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=2.9e-13 Score=128.87 Aligned_cols=229 Identities=13% Similarity=0.116 Sum_probs=143.6
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhh----hHHHhCCccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVD----SSVIMGQTGEFQKD 178 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 178 (433)
.+...+|.+.++++. +. +..++++++++|+.+ +.+++++||+|+++.+.|.+... .+...|
T Consensus 63 ~P~~~~lE~~la~le----g~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~G-------- 128 (384)
T PRK06434 63 NPTVQAFEEKYAVLE----NA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLG-------- 128 (384)
T ss_pred ChhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcC--------
Confidence 345677888888875 43 456777777789886 67889999999999887766543 334445
Q ss_pred ccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Q 045431 179 AEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRS 258 (433)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 258 (433)
.++++++.++.+.+. +. ..++++|++.+|.|||+.+.+ +++|.++|++++ +++|.+++.- +.+ .+
T Consensus 129 ----i~v~fvd~~~~~~~~--l~-~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-~~~--~p 193 (384)
T PRK06434 129 ----IHVDYIDTDRLNSLD--FD-PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-YNQ--NP 193 (384)
T ss_pred ----cEEEEECCCChhhee--ec-CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-ccC--Cc
Confidence 377788776433333 22 136899998899999998766 888899999998 4669997521 111 12
Q ss_pred ccccCCCCcceEEEecccccccccc-cceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhH
Q 045431 259 IFEIPGAKEVAIETSSFSKYAGFTG-VRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKA 337 (433)
Q Consensus 259 ~~~~~~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 337 (433)
+. . +-.+++.|.+|.++.+| .=.|.++++++.+ .+.+...........+++...... .+.+.
T Consensus 194 l~-~----gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~-------~~~~~~~~~~~G~~~~~~~A~l~~-----~gL~t 256 (384)
T PRK06434 194 LD-L----GADVVIHSATKYISGHSDVVMGVAGTNNKSI-------FNNLVERRKTLGSNPDPIQAYLAL-----RGLKT 256 (384)
T ss_pred hh-c----CCCEEEeecccccCCCCCceEEEEecCcHHH-------HHHHHHHHHhcCCCCCHHHHHHHH-----hCCCc
Confidence 21 1 12388999999996323 2246666654432 233333322222223333222222 23344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-CC-eeecC----------CCccEEEEECCC
Q 045431 338 VHEVIGFYKENTDIIVETFNSL-GF-KVYGG----------KNAPYVWVQFPG 378 (433)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~----------~~g~~~~~~~~~ 378 (433)
+..+.++.+++...+.+.|+++ .+ .+..| ..|..+.+.+.+
T Consensus 257 L~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~ 309 (384)
T PRK06434 257 LGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS 309 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC
Confidence 5777788888899999999987 33 23222 134456677753
No 323
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=1.4e-13 Score=134.88 Aligned_cols=351 Identities=11% Similarity=0.057 Sum_probs=199.6
Q ss_pred HHHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC---
Q 045431 52 RKAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE--- 125 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~--- 125 (433)
.++......+++..||+..|.-. -..++.+.+++.+++.+... .....+ ..+.+..+++.+....+..
T Consensus 52 a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~-~~~~~~-----~~~~~~~la~~L~~~~p~~~~~ 125 (464)
T PRK06938 52 ARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHTLDL-----TTPVKDQFVQDLFASLPEAFAR 125 (464)
T ss_pred ccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhc-cccccc-----CCHHHHHHHHHHHHhCcccccc
Confidence 34444455667889999776532 23678999999998864211 001112 1244444555543311211
Q ss_pred CCcEEEc-CChHHHHHHHHHh---cCCCCEEEEeCCCChhhhhhHHHhCCcccc-cccccccceEEEeecCccCC--c--
Q 045431 126 EGDIFVS-DGAKCDISRLQIV---FGSNVTMAVQDPSYPAYVDSSVIMGQTGEF-QKDAEKYGKIEYMRCTAENG--F-- 196 (433)
Q Consensus 126 ~~~i~~~-~G~~~al~~l~~l---~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--~-- 196 (433)
.+.++++ +++++|......+ .....+|+..+-+|++.......+.....+ ..++....++..++...... +
T Consensus 126 ~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 205 (464)
T PRK06938 126 EAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGL 205 (464)
T ss_pred cceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccC
Confidence 1356554 6778887753222 234467888888888865443333211111 01111111223333321100 0
Q ss_pred ---------ccCCCC----C----CCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 197 ---------FPDLST----V----ARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 197 ---------~~~~~~----~----~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
...+++ . .++.+|+ ..| +.-.|.+ .+.+.++++.++|++||+++|.||+..+|...|...
T Consensus 206 ~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI-~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~ 284 (464)
T PRK06938 206 GGEAGVRANLHYLENLLDDPESGVVLPAAVI-LEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF 284 (464)
T ss_pred chhhHHHHHHHHHHHHHHhhccCCCceEEEE-EccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH
Confidence 000111 1 1345544 466 4445664 468999999999999999999999999886555433
Q ss_pred cccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhH
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKA 337 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 337 (433)
....++-.+| ++ +++|.+| .|+.+|.+++++++ +.+......++.+.++++.+++.+.|+....
T Consensus 285 a~e~~gv~PD-iv---~~gKglg-gG~PlsAv~~~~~~---------~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~-- 348 (464)
T PRK06938 285 AFEHAGIIPD-VV---VLSKAIG-GSLPLAVVVYREWL---------DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE-- 348 (464)
T ss_pred HHHhcCCCCC-EE---Eeecccc-CCCceEEEeehhHh---------hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH--
Confidence 2222332345 33 5799998 89999999987663 1121223445667889999988888863222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc----CC-eeecCCCccEEEEECCCC------------C---hHHHHHHHHHcCCeEec
Q 045431 338 VHEVIGFYKENTDIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR------------S---SWDVFSEILEKTHVVTT 397 (433)
Q Consensus 338 ~~~~~~~~~~~~~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~------------~---~~~~~~~l~~~~gi~v~ 397 (433)
+++.++.++.-+++.+.|+++ ++ .-+. ..|+++.+.+... + ...+...++ ++||.+.
T Consensus 349 -~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~Vr-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~ 425 (464)
T PRK06938 349 -HRLAEHAAAMGERLREHLRQLQRDYPQLGDVR-GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILE 425 (464)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhCCCeeeee-ccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEe
Confidence 334455555556666666543 32 1122 2466666766311 0 123444554 4699997
Q ss_pred CCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 398 PGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 398 ~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
++..+ .+.+|+. +..++++++++++++.+++
T Consensus 426 ~~g~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l 458 (464)
T PRK06938 426 LGGRH----GSVVRFLPPLIITAEQIDEVAEIFAEAV 458 (464)
T ss_pred ecCCC----CCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 64221 3679997 5679999999999998876
No 324
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.64 E-value=3.5e-14 Score=134.82 Aligned_cols=212 Identities=20% Similarity=0.225 Sum_probs=135.4
Q ss_pred CHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhC-Ccccccccccccce
Q 045431 107 EKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMG-QTGEFQKDAEKYGK 184 (433)
Q Consensus 107 ~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~ 184 (433)
...|.+.|++.- + .+.+++++++++|+.+ +.+++++||+|++....|.+....++..- ..+ ..
T Consensus 57 ~~~le~~la~Le----~--g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~g---------v~ 121 (386)
T PF01053_consen 57 VRALEQRLAALE----G--GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFG---------VE 121 (386)
T ss_dssp HHHHHHHHHHHH----T---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTT---------SE
T ss_pred HHHHHHHHHHhh----c--ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccC---------cE
Confidence 445666666653 3 3678999999999976 78999999999999999999876666421 112 36
Q ss_pred EEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcC-CEEEEeccccccccCCCCCcccccC
Q 045431 185 IEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNG-SIIVYDSAYALYISDDNPRSIFEIP 263 (433)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~-~~li~De~~~~~~~~~~~~~~~~~~ 263 (433)
+.+++..+...+...+ .+++++||+-+|.||+..+.+ +++|+++|+++| +++|+|+.++..... .++ .+
T Consensus 122 v~~~d~~d~~~l~~~l--~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~~---~pL-~~- 191 (386)
T PF01053_consen 122 VTFVDPTDLEALEAAL--RPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYNQ---NPL-EL- 191 (386)
T ss_dssp EEEESTTSHHHHHHHH--CTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC----GG-GG-
T ss_pred EEEeCchhHHHHHhhc--cccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceeee---ccC-cC-
Confidence 6666543222221112 258999999899999988777 899999999998 999999999742111 112 22
Q ss_pred CCCcceEEEecccccccccc-cceeeeeccc--cccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHH
Q 045431 264 GAKEVAIETSSFSKYAGFTG-VRLGWTVIPK--ELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHE 340 (433)
Q Consensus 264 ~~~~~vi~i~S~sK~~~~~G-~r~G~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 340 (433)
+-.|++.|.+|.++-.| .=.|.++++. ++ .+.+...........++.......+ +.+.+.-
T Consensus 192 ---GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~--------~~~l~~~~~~~G~~~~p~da~ll~r-----gl~Tl~~ 255 (386)
T PF01053_consen 192 ---GADIVVHSATKYLSGHSDVMGGAVVVNGSSEL--------YDRLREFRRLLGATLSPFDAWLLLR-----GLRTLPL 255 (386)
T ss_dssp ---T-SEEEEETTTTTTTSSSE-EEEEEESSHHHH--------HHHHHHHHHHHT-B--HHHHHHHHH-----HHTTHHH
T ss_pred ---CceEEEeeccccccCCcceeeEEEEECchhhh--------hhhhcchhhhcCccchHHHHHHHhc-----CCCcHHH
Confidence 12388999999885222 2257777665 33 2444444433333334433332232 3344677
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 045431 341 VIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 341 ~~~~~~~~~~~l~~~l~~~ 359 (433)
+.++..++...+.+.|+++
T Consensus 256 R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEH 274 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7788889999999999987
No 325
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.4e-14 Score=127.60 Aligned_cols=339 Identities=11% Similarity=0.128 Sum_probs=208.9
Q ss_pred cCCCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 59 KYPDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 59 ~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
..++...+||-.+.. --.+.|.+++++++...+.. ..+...|. .-..++.+.+.+++ + -+.++.++-+
T Consensus 55 D~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLt-lssrafYn--d~~~~f~~~vt~lf----~--~~kvlpmnTG 125 (427)
T KOG1402|consen 55 DPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLT-LSSRAFYN--DVLGEFAEYVTKLF----G--YDKVLPMNTG 125 (427)
T ss_pred CCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhh-hhhHHHhh--hhHHHHHHHHHHhc----C--cceeeecccc
Confidence 334555677644433 24689999999999998653 23333452 23445555555553 3 3566666655
Q ss_pred HHHHHHHHHhc-------C--CCC--EEEEeCCCChh-hhhhHHHhCCcccccccccccce-EEEeecCccCCcccCCCC
Q 045431 136 KCDISRLQIVF-------G--SNV--TMAVQDPSYPA-YVDSSVIMGQTGEFQKDAEKYGK-IEYMRCTAENGFFPDLST 202 (433)
Q Consensus 136 ~~al~~l~~l~-------~--~gd--~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 202 (433)
.++......+. + |.| .|+....+|++ ...++.+.+...-|..+|..... +..+|.++-..+...++
T Consensus 126 aEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~- 204 (427)
T KOG1402|consen 126 AEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALK- 204 (427)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhc-
Confidence 66665321111 2 322 34555555544 22222222222223333333222 34444443222222222
Q ss_pred CCCccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccc
Q 045431 203 VARTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 203 ~~~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~ 280 (433)
.+++.+ ++..| +.--|++. ++..+++..++|++|++++|.||++.++...|.......-...+|.++ +.|.++
T Consensus 205 ~~~vaa-FivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi----lgKalS 279 (427)
T KOG1402|consen 205 SPNVAA-FIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI----LGKALS 279 (427)
T ss_pred CCCeeE-EEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE----Eecccc
Confidence 256665 44567 88888766 456899999999999999999999998877765322111111355444 679886
Q ss_pred cccc-ceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 281 FTGV-RLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 281 ~~G~-r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
.|+ .++.++++++++ -.+....+.++.+.+++..+++.++|+-..+ +++.++.+..-..+++.|.++
T Consensus 280 -GG~~Pvsavl~~~~im--------~~~~pgeHgsTyggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l 347 (427)
T KOG1402|consen 280 -GGVYPVSAVLADDDIM--------LNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKL 347 (427)
T ss_pred -CCeeeeEEEEecHHHH--------hccCCCccccccCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhc
Confidence 664 788888888885 3355556778888999999999999874332 667777777888888888887
Q ss_pred C--C----eeecCCCccEEEEECC-----CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHH
Q 045431 360 G--F----KVYGGKNAPYVWVQFP-----GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACK 426 (433)
Q Consensus 360 g--~----~~~~~~~g~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~ 426 (433)
. + ..+.. .|++..+.+. +.++.++. ..+++.|+...|-. .+-||++ +..+++|++++++
T Consensus 348 ~~~~p~~v~~VRG-rGl~~ai~i~~~~~~~~~aw~~c-l~lk~~g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e 419 (427)
T KOG1402|consen 348 QKKFPHVVKEVRG-RGLLNAIVINPSKTSGQDAWDVC-LALKENGLLAKPTH------GNIIRFAPPLVISEEDLREGIE 419 (427)
T ss_pred cccccchhheeec-cceEEEEEeccccccchhHHHHH-HcccccccccCCCC------CCeEEecCCcccCHHHHHHHHH
Confidence 2 2 33332 5677666654 12233333 33566788887743 3589999 6789999999999
Q ss_pred HHHHhh
Q 045431 427 RFKHLY 432 (433)
Q Consensus 427 ~l~~~l 432 (433)
.+.+++
T Consensus 420 ~i~k~i 425 (427)
T KOG1402|consen 420 AIEKTI 425 (427)
T ss_pred HHHHHh
Confidence 999876
No 326
>PRK06148 hypothetical protein; Provisional
Probab=99.63 E-value=1.6e-13 Score=145.95 Aligned_cols=342 Identities=11% Similarity=0.035 Sum_probs=200.1
Q ss_pred CCCCceEEecCCCCCC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 60 YPDAEVISLGIGDTTE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 60 ~~~~~~i~l~~g~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
.+++..||+..|...+ ..+|.+.+++.+++.+... ...|. .+....+|+.|....+...+.+++++++++|
T Consensus 621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~---~~~~~-----~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA 692 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNT---NTRYL-----HDAIVAYAERLTATLPDGLTVAFFVNSGSEA 692 (1013)
T ss_pred CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCC---cCCcC-----CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHH
Confidence 4467788987775433 3689999999999976421 12332 2334445555443223334688999999999
Q ss_pred HHHHHH---hcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccc-cceEEE--------eecCccC-C--------cc
Q 045431 139 ISRLQI---VFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEK-YGKIEY--------MRCTAEN-G--------FF 197 (433)
Q Consensus 139 l~~l~~---l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~--------~~~~~~~-~--------~~ 197 (433)
..+... ......+|+..+.+|++.......+.........+.. ...+.. .+.+..+ . +.
T Consensus 693 ~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 772 (1013)
T PRK06148 693 NSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVA 772 (1013)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHH
Confidence 886322 2334567888888888765333222210000000000 001111 1111000 0 00
Q ss_pred cCCC---C-CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceE
Q 045431 198 PDLS---T-VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAI 270 (433)
Q Consensus 198 ~~~~---~-~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi 270 (433)
..++ . ..++.+| |..| +.-.|. ..+++.++++.++|++||+++|.||++.+|...|. ......++-.+|
T Consensus 773 ~~i~~~~~~~~~iAAv-I~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD--- 848 (1013)
T PRK06148 773 EQIAAMAAKGRGPAFF-IAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD--- 848 (1013)
T ss_pred HHHHhhhccCCceEEE-EEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcc---
Confidence 0011 1 1234554 4555 333454 55888999999999999999999999988865553 232222332344
Q ss_pred EEecccccccccccceeeeeccccccccCCcchhHHHHHH-HhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHH
Q 045431 271 ETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRI-VCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 271 ~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (433)
+-+++|.+| .|+.+|.+++++++. +.+... ...++.+.++++.+++.+.|+.... +++.+..++.-
T Consensus 849 -ivt~gK~lg-gG~Plgav~~~~ei~--------~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~---e~l~~~~~~~G 915 (1013)
T PRK06148 849 -IVTMGKPIG-NGHPMGAVVTTREIA--------DSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED---EDLQRNALEIG 915 (1013)
T ss_pred -eeeeccccc-CCcceEEEEEcHHHH--------hhccCCCccccCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Confidence 346899998 899999999998874 333211 1335666789999888888763222 34445556666
Q ss_pred HHHHHHHhhc----CC-eeecCCCccEEEEECCCC-----C----hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--
Q 045431 350 DIIVETFNSL----GF-KVYGGKNAPYVWVQFPGR-----S----SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS-- 413 (433)
Q Consensus 350 ~~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~~-----~----~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~-- 413 (433)
+++.+.|+++ ++ .-+. ..|.++-+.+... . ...+...++ ++||.+.+... ..+.+||.
T Consensus 916 ~~l~~~L~~l~~~~~~i~~Vr-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~----~~~vlr~~Pp 989 (1013)
T PRK06148 916 NYLLAGLRELQDRFDIIGDVR-GMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP----HDNVLKIRPP 989 (1013)
T ss_pred HHHHHHHHHHHHhCCCceEEe-eeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC----CCCEEEEeCC
Confidence 6666666553 22 1122 2466666666421 1 123444544 56999976421 23678888
Q ss_pred eccChhHHHHHHHHHHHhh
Q 045431 414 AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 414 ~~~~~~~l~~~l~~l~~~l 432 (433)
+..+++++++++++|.+++
T Consensus 990 l~it~~~id~~l~~l~~~l 1008 (1013)
T PRK06148 990 LIFSRADADHLLEVLDDVL 1008 (1013)
T ss_pred ccCCHHHHHHHHHHHHHHH
Confidence 5679999999999998876
No 327
>PRK06149 hypothetical protein; Provisional
Probab=99.62 E-value=3e-13 Score=143.98 Aligned_cols=343 Identities=12% Similarity=0.096 Sum_probs=196.1
Q ss_pred CCCCceEEecCCCCCCC-ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH
Q 045431 60 YPDAEVISLGIGDTTEP-IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD 138 (433)
Q Consensus 60 ~~~~~~i~l~~g~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a 138 (433)
.+++..||+..|...+. .+|.+.+++.+++.+... ...|. .+....+++.|....+-..+.+++++++++|
T Consensus 582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~---~~~~~-----~~~~~elae~L~~~~p~~~~~v~f~~SGsEA 653 (972)
T PRK06149 582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNT---NSRFH-----YAAVAEFSERLAALAPDGLDTVFLVNSGSEA 653 (972)
T ss_pred CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccc---ccccc-----CHHHHHHHHHHHHhCCCCcCEEEEeCCchHH
Confidence 34667889987764444 789999999999876432 11221 1333444444433223234689999999999
Q ss_pred HHH-HH--HhcCCCCEEEEeCCCChhhhhhHHHh-CCc-ccccccccccceEEEeecCc--------cCC---cccC---
Q 045431 139 ISR-LQ--IVFGSNVTMAVQDPSYPAYVDSSVIM-GQT-GEFQKDAEKYGKIEYMRCTA--------ENG---FFPD--- 199 (433)
Q Consensus 139 l~~-l~--~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~--- 199 (433)
... +. ........|+..+-+|++.......+ +.. ............+..++... ++. +..+
T Consensus 654 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 733 (972)
T PRK06149 654 NDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVA 733 (972)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHH
Confidence 886 42 12333456777777787644222111 110 00000000000111111100 000 0001
Q ss_pred -CC----CCCCccEEEEcCC-CCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-CCcccccCCCCcceEE
Q 045431 200 -LS----TVARTDIIFFCSP-NNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN-PRSIFEIPGAKEVAIE 271 (433)
Q Consensus 200 -~~----~~~~~~~i~l~~p-~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~vi~ 271 (433)
++ ...++.+ +++.| +...| ...+++.++++.++|++||+++|.||++.+|...|. ......+.-.+| ++
T Consensus 734 ~l~~~~~~~~~iAa-vI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD-iv- 810 (972)
T PRK06149 734 QLEELDASGRGLAG-FICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD-II- 810 (972)
T ss_pred HHHHHhhcCCceEE-EEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC-EE-
Confidence 11 1123444 44556 33334 566888999999999999999999999987755543 222222222344 23
Q ss_pred EecccccccccccceeeeeccccccccCCcchhHHHHH-HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHH
Q 045431 272 TSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNR-IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 272 i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 350 (433)
+++|.+| .|+.+|++++++++. +.+.. ....++.+.++++.+++.+.|+.... +++.+..++.-+
T Consensus 811 --t~gK~lg-~G~Pl~av~~~~~i~--------~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~---e~l~~~~~~~G~ 876 (972)
T PRK06149 811 --TMAKGMG-NGHPLGAVITRREIA--------EALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE---EKLQENARRVGD 876 (972)
T ss_pred --Eeccccc-CCeeeEEEEEcHHHH--------hhhccCCcccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHH
Confidence 7899998 899999999998874 33321 11223446788898888888763222 234455555556
Q ss_pred HHHHHHhhc----CC-eeecCCCccEEEEECCC------CC---hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--e
Q 045431 351 IIVETFNSL----GF-KVYGGKNAPYVWVQFPG------RS---SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--A 414 (433)
Q Consensus 351 ~l~~~l~~~----g~-~~~~~~~g~~~~~~~~~------~~---~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~ 414 (433)
++.+.|+++ ++ ..+. ..|+++-+.+.. .. ...+...++ ++||.+.+.. ...+.+||. +
T Consensus 877 ~l~~~L~~l~~~~~~i~~vr-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g----~~~~vl~~~Ppl 950 (972)
T PRK06149 877 HLKARLEALADRHPLIGAVH-GMGLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTG----DHLNILKIKPPL 950 (972)
T ss_pred HHHHHHHHHHHhCCCeEEEe-ecceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecC----CCCCEEEEECCC
Confidence 666666553 32 2222 246666666631 01 223445555 4599997742 123679988 5
Q ss_pred ccChhHHHHHHHHHHHhhC
Q 045431 415 FGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 415 ~~~~~~l~~~l~~l~~~l~ 433 (433)
..+++++++++++|.++++
T Consensus 951 ~it~~~id~~~~~l~~~l~ 969 (972)
T PRK06149 951 CLDRESADFFVDMLDRVLT 969 (972)
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 6799999999999998863
No 328
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.62 E-value=1.8e-13 Score=123.50 Aligned_cols=349 Identities=14% Similarity=0.111 Sum_probs=218.0
Q ss_pred HHHHHhcCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE
Q 045431 53 KAAHMLKYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI 129 (433)
Q Consensus 53 ~~~~~~~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i 129 (433)
+.......+++..+|+-.|-.. -.+.|++.+++.+++.... .....|. ..-..+|-+++++.+ .-+-.-+
T Consensus 40 ~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~--H~t~~~~-~~pi~~~Ae~L~s~~----P~~l~~v 112 (442)
T KOG1404|consen 40 EGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLY--HTTSGYL-NPPIHDLAEALVSKL----PGDLKVV 112 (442)
T ss_pred ceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhE--Eeecccc-CCcHHHHHHHHHHhC----CCCceEE
Confidence 3333444556667777666532 3578999999999997654 4455663 456788888888886 4455679
Q ss_pred EEcCChHHHHHHH--HHhc-CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccc-eEEEee-cCccCCc--------
Q 045431 130 FVSDGAKCDISRL--QIVF-GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYG-KIEYMR-CTAENGF-------- 196 (433)
Q Consensus 130 ~~~~G~~~al~~l--~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~-~~~~~~~-------- 196 (433)
+++|++++|.++. ++.+ .-.-.++--..+|.+.......+....-|+....... .+.... .++..+.
T Consensus 113 fF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e 192 (442)
T KOG1404|consen 113 FFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEE 192 (442)
T ss_pred EEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhh
Confidence 9999999999863 2222 2233566677788776544433333333333221110 011110 0110000
Q ss_pred -----ccCCCC-----CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC
Q 045431 197 -----FPDLST-----VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG 264 (433)
Q Consensus 197 -----~~~~~~-----~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 264 (433)
..+++. .+.+-+-++..+ +..-|+ .+++..+++..++|+++|.+.|.||+...|...|....+.+.+-
T Consensus 193 ~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v 272 (442)
T KOG1404|consen 193 ASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGV 272 (442)
T ss_pred hHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCC
Confidence 001111 123344455544 665564 45777999999999999999999999999888775444443333
Q ss_pred CCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHH-hhccCCCcHHHHHHHHHhcCcCChhHHHHHHH
Q 045431 265 AKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIV-CTCFNGASNISQAGGLACLSPEGFKAVHEVIG 343 (433)
Q Consensus 265 ~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 343 (433)
.+| |-|++|.+| .|+.+|.++..+++. +.+.+.. ...+.+.++++.+++.+.|+-... +++.+
T Consensus 273 ~PD----IvTmAKgiG-nG~Pl~AVvtt~EIa--------~v~~~~~~~fnTyggnP~a~avg~aVL~Vike---e~LqE 336 (442)
T KOG1404|consen 273 VPD----IVTMAKGIG-NGFPLGAVVTTPEIA--------DVLNQKSSHFNTYGGNPVACAVGLAVLKVIKE---ENLQE 336 (442)
T ss_pred Ccc----HHHHHhhcc-CCCcceeeecCHHHH--------HHHHhccccccccCCCchhHHHHHHHHHHHHH---HhHHH
Confidence 344 558999998 999999999999983 5555444 556677889999988888874433 45555
Q ss_pred HHHHHHHHHHHHHhhc--CCeeecCC--CccEEEEECCCC---------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeE
Q 045431 344 FYKENTDIIVETFNSL--GFKVYGGK--NAPYVWVQFPGR---------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFI 410 (433)
Q Consensus 344 ~~~~~~~~l~~~l~~~--g~~~~~~~--~g~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~i 410 (433)
..++.-.++.+.|.++ +.++++.- .|+++-+.+-.. ....++.+-.++.|+.+.-|..++ +.|
T Consensus 337 ~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G----~vf 412 (442)
T KOG1404|consen 337 NAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG----NVF 412 (442)
T ss_pred HHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc----eEE
Confidence 5556666777776665 34443322 345555554311 112344455567799997776654 389
Q ss_pred EEe--eccChhHHHHHHHHH
Q 045431 411 RVS--AFGHRGNVLEACKRF 428 (433)
Q Consensus 411 Ri~--~~~~~~~l~~~l~~l 428 (433)
||+ ++.+.+|++.+++..
T Consensus 413 riaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 413 RIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EecCCeeccHHHHHHHHHHH
Confidence 999 678999998777744
No 329
>PLN03032 serine decarboxylase; Provisional
Probab=99.62 E-value=3.6e-13 Score=127.40 Aligned_cols=318 Identities=12% Similarity=0.058 Sum_probs=196.2
Q ss_pred ChHHHHHHHHHHHh-hcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE--EEcCChHHHHHH-HHHhc--CCCC
Q 045431 77 IPEVITSALAKRSY-ALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI--FVSDGAKCDISR-LQIVF--GSNV 150 (433)
Q Consensus 77 ~~~~~~~a~~~~~~-~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i--~~~~G~~~al~~-l~~l~--~~gd 150 (433)
......+++.+.+. ..++....+.| .....++.+.+.+|+.+.++++++++ ++|+|+|++... +...- .+++
T Consensus 35 ~~~~~~~~~~~~~~~~~gnP~s~~~~--g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~ 112 (374)
T PLN03032 35 FDYGELSQLMKYSINNLGDPFIESNY--GVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDG 112 (374)
T ss_pred cChHHHHHHHHhcccCCCCCcccCCC--CccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCc
Confidence 33345666666654 33332222233 23457777777777777678888887 999999999875 43221 3456
Q ss_pred EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC-----CCCccEEEEcCCCCccccCCCH
Q 045431 151 TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST-----VARTDIIFFCSPNNPTGAAATR 224 (433)
Q Consensus 151 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~i~l~~p~nPtG~~~~~ 224 (433)
.|++..-.|+++...++.+|. .+..+|++.++..+.+ +++ ..++.+++++..+|+||.+-|
T Consensus 113 ~vi~s~~~H~Sv~kaa~~lg~------------~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp- 179 (374)
T PLN03032 113 ILYASRESHYSVFKAARMYRM------------EAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD- 179 (374)
T ss_pred EEEeCCCceeHHHHHHHHcCC------------CCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC-
Confidence 899999999999999888883 5667788765544333 221 124667777788999999877
Q ss_pred HHHHHHHHHHHHcC-----CEEEEecccccccc--CCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccc
Q 045431 225 EQLTRLVQFAKDNG-----SIIVYDSAYALYIS--DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLF 297 (433)
Q Consensus 225 ~~~~~i~~~a~~~~-----~~li~De~~~~~~~--~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~ 297 (433)
+++|.++|++|| +++.+|.+++.+.. ... .+...+. ..-..+.-|.+|.++ ....+|.++.++..+.
T Consensus 180 --i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~-~~~~~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~ 253 (374)
T PLN03032 180 --LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR-APEVTFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVK 253 (374)
T ss_pred --HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC-CcccCCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhH
Confidence 778888888996 58999999986322 111 0111111 112245668899887 4556899998876641
Q ss_pred cCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC
Q 045431 298 SDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP 377 (433)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~ 377 (433)
. .....+-+.........+-+......+...|...+.+.+.++.++.-+..+++.+.|++.++.....+..+.+.++-+
T Consensus 254 ~-~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~ 332 (374)
T PLN03032 254 A-LSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERP 332 (374)
T ss_pred h-hccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCC
Confidence 1 000000000000001111122233334455555566777888899999999999999998887654445555555554
Q ss_pred CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHHHh
Q 045431 378 GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFKHL 431 (433)
Q Consensus 378 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~~~ 431 (433)
. ... + .+ |..+.+- ++.+|++++. +.+.+++.++.|++.
T Consensus 333 ~--~~~----~-~~-~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 333 M--DEA----F-IK-KWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred C--cHh----H-hh-eeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 111 2 22 5555431 2479998643 678899999988753
No 330
>PRK04311 selenocysteine synthase; Provisional
Probab=99.62 E-value=3.3e-13 Score=131.15 Aligned_cols=312 Identities=14% Similarity=0.150 Sum_probs=178.5
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCC-----CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCC
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGA-----EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNV 150 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd 150 (433)
+.|+.+.+++.+.+..+.+. .|.- ..-...+++.+++++ +. +..++++++++++.++...+.+||
T Consensus 97 ~l~~~v~eav~~~~~~~~~l----e~~l~~g~~g~r~~~~e~~lA~l~----Ga--e~a~vv~sgtaAl~l~l~~l~~Gd 166 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNL----EYDLATGKRGSRDRALAALLCALT----GA--EDALVVNNNAAAVLLALNALAAGK 166 (464)
T ss_pred CCCHHHHHHHHHHHhccccc----ccchhhcccchHHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHhCCCC
Confidence 47889999999988654321 1211 112357888888876 54 356777777789887556679999
Q ss_pred EEEEeCCCChhh------hhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCCCc--cc-
Q 045431 151 TMAVQDPSYPAY------VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNNP--TG- 219 (433)
Q Consensus 151 ~Vl~~~p~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~nP--tG- 219 (433)
+|++.+..+..+ .......| ..++.++..... ...+++. .+++++|++++++|| +|
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G------------~~l~~v~~~~~t-~~~dle~aI~~~TklV~~vh~sN~~i~G~ 233 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAG------------ARLVEVGTTNRT-HLRDYEQAINENTALLLKVHTSNYRIEGF 233 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCC------------cEEEEECCCCCC-CHHHHHHhcCccCeEEEEEcCCCcccccc
Confidence 999988755421 22344455 366666653221 1122222 367899999999998 34
Q ss_pred -cCCCHHHHHHHHHHHHHcCCEEEEeccccccc----cC-CCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 220 -AAATREQLTRLVQFAKDNGSIIVYDSAYALYI----SD-DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 220 -~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~----~~-~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
...+ +++|+++|++||+++|+|...+.+. +. ...+.+...-. .+..+++.|.+|++| |...|++++++
T Consensus 234 ~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~-~GaDiv~fSg~K~Lg--Gp~~G~i~g~~ 307 (464)
T PRK04311 234 TKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLA-AGVDLVTFSGDKLLG--GPQAGIIVGKK 307 (464)
T ss_pred CCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHh-cCCcEEEecCccccc--CCceEEEEEcH
Confidence 3445 8999999999999999999644321 10 00111222111 123488999999986 33589999988
Q ss_pred cccccCCcchhHHHHHHHhhccCCCcHHH---HHHHHHhcCcCC--------hhHHHHHHHHHHHHHHHHHHHHhhc---
Q 045431 294 ELLFSDGFPVAKDFNRIVCTCFNGASNIS---QAGGLACLSPEG--------FKAVHEVIGFYKENTDIIVETFNSL--- 359 (433)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---q~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~l~~~l~~~--- 359 (433)
+++ +.+............... ..+++..+.+.. .+.+....++.+++.+.+.+.|+.+
T Consensus 308 ~li--------~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~ 379 (464)
T PRK04311 308 ELI--------ARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA 379 (464)
T ss_pred HHH--------HHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC
Confidence 875 333311111111111111 122222111111 1223344466777888888888775
Q ss_pred C--CeeecC----CCc-------cEEEEECC--CCChHHHHHHHHHcCC--eEecCCCCCCCCCCCeEEEee-ccChhHH
Q 045431 360 G--FKVYGG----KNA-------PYVWVQFP--GRSSWDVFSEILEKTH--VVTTPGSGFGPGGEGFIRVSA-FGHRGNV 421 (433)
Q Consensus 360 g--~~~~~~----~~g-------~~~~~~~~--~~~~~~~~~~l~~~~g--i~v~~g~~f~~~~~~~iRi~~-~~~~~~l 421 (433)
+ +.+... .+| +-..+.+. +....++. ..+++.. |..+ ..++.+.+.+ +..++|+
T Consensus 380 ~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~-~~lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~ 451 (464)
T PRK04311 380 AFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALA-ARLRLLPPPVIGR-------IEDGRLLLDLRTLEEEDE 451 (464)
T ss_pred CeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHH-HHHhcCCCCEEEE-------EECCEEEEEeCcCCHHHH
Confidence 2 233321 011 12333333 33444444 4455533 3333 2356777886 4488999
Q ss_pred HHHHHHHHHhh
Q 045431 422 LEACKRFKHLY 432 (433)
Q Consensus 422 ~~~l~~l~~~l 432 (433)
+..+++|++++
T Consensus 452 ~~~~~~~~~~~ 462 (464)
T PRK04311 452 ERLAAALLEAL 462 (464)
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 331
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.61 E-value=6.2e-14 Score=131.91 Aligned_cols=343 Identities=15% Similarity=0.156 Sum_probs=183.3
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCC---CCCCCCCCCHHHHHHHHHHHhccCCCCC----CcEEEcCChHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGY---SGYGAEQGEKPLRAAIASTFYKDLGIEE----GDIFVSDGAKC 137 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~la~~l~~~~~~~~----~~i~~~~G~~~ 137 (433)
.|+|--.++ ..++.+.+++...+..... .+. .-|+-..-..++.+...+...+.+++++ -+|-..||+.+
T Consensus 22 ~l~LiaSEN--~~Sp~v~~al~S~l~nkya-eg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~A 98 (399)
T PF00464_consen 22 TLNLIASEN--YMSPAVREALGSDLTNKYA-EGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQA 98 (399)
T ss_dssp SEE-CTT-------HHHHHHHTSGGGGS-T-TEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHH
T ss_pred CccccCccc--ccCHHHHHHhCCcceeecc-ccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHH
Confidence 578776665 3566777777666653221 111 1222222233444333344344557763 46777788887
Q ss_pred HHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC------CCCccEEEE
Q 045431 138 DISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST------VARTDIIFF 211 (433)
Q Consensus 138 al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~l 211 (433)
.+.++.++++|||+|+..++.+.++...-.....+.+ .....+.+.+.++++++. ...|+++ ..+|++|++
T Consensus 99 n~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~--~~~~~~~~~~~y~~d~~~-~~ID~d~l~~~a~~~kPklIi~ 175 (399)
T PF00464_consen 99 NLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKI--SASGLYFESVPYPVDPDT-GLIDYDELEKLAKEHKPKLIIC 175 (399)
T ss_dssp HHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBS--SHHHHHSEEEEEEB-TTT-SSB-HHHHHHHHHHH--SEEEE
T ss_pred HHHHHHHHHhhcCcEEecChhhccccccccccccccc--ccccceEEEEeeeeecCC-CeECHHHHHHHHhhcCCCEEEE
Confidence 7777899999999999998888765432211111000 001112477788887543 3444433 258998887
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCC-CCcccccCCCCcceEEEecccccccccccceeee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL-YISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~-~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
-.-.+|- .-+.+++.++|.+.|.+|+.|-+|.. +...+. +.|+.. . .|+.+|.+|+| +|-|-|.+
T Consensus 176 G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-A-----Dvvt~sThKtl--~GPrggiI 242 (399)
T PF00464_consen 176 GASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-A-----DVVTGSTHKTL--RGPRGGII 242 (399)
T ss_dssp E-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-S-----SEEEEESSGGG---SSS-EEE
T ss_pred CchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-c-----eEEEeeccccc--cccCceEE
Confidence 4333433 23478889999999999999999864 555554 444422 1 28889999998 89999999
Q ss_pred eccccccccC------CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCe
Q 045431 290 VIPKELLFSD------GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPE-GFKAVHEVIGFYKENTDIIVETFNSLGFK 362 (433)
Q Consensus 290 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 362 (433)
++++.....+ ...+.+.+.+.......+.+.....++.+.-..+ .....++..+++-++.+.|.+.|.+.|+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~ 322 (399)
T PF00464_consen 243 LTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFK 322 (399)
T ss_dssp EES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-E
T ss_pred EEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcE
Confidence 9982111000 1122456665444444444455554444332212 12345788888999999999999999999
Q ss_pred eec-CCCccEEEEECCC-CChHHHHHHHHHcCCeEec----CCCCCCCCCCCeEEEee------ccChhHHHHHHHH
Q 045431 363 VYG-GKNAPYVWVQFPG-RSSWDVFSEILEKTHVVTT----PGSGFGPGGEGFIRVSA------FGHRGNVLEACKR 427 (433)
Q Consensus 363 ~~~-~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~----~g~~f~~~~~~~iRi~~------~~~~~~l~~~l~~ 427 (433)
+.. ......+|+++.. ..+...+...+++.||.+. |++ -.+.....+||+. ...++++++..+-
T Consensus 323 v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d-~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 323 VVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGD-RSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp EGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTT-STTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred EEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCC-CCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 874 3445678999863 2244556677788899985 333 1122246799994 1257777766543
No 332
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=3.9e-13 Score=130.28 Aligned_cols=218 Identities=15% Similarity=0.119 Sum_probs=134.0
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh----HHHhCCcccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS----SVIMGQTGEFQKDA 179 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~ 179 (433)
+-...+++.++++. +. .+.|++++|+ +++.+ +..++++||+|+++...|.+.... +...|
T Consensus 69 pt~~~le~~la~l~----g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~G--------- 133 (437)
T PRK05613 69 PTVEALENRIASLE----GG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLG--------- 133 (437)
T ss_pred hHHHHHHHHHHHHh----CC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcC---------
Confidence 34577888888876 54 4667777777 55554 677889999999999999887432 23445
Q ss_pred cccceEEEeecCccCCcccCCCC--CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Q 045431 180 EKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPR 257 (433)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~ 257 (433)
+++..++ ++. + ..+++. .+++++|++.+|.||+|.+.+ +++|.++|+++|+++|+|.+++.... ..
T Consensus 134 ---i~v~~vd-~~~-d-~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~---~~ 201 (437)
T PRK05613 134 ---IEVTFVE-NPD-D-PESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL---VR 201 (437)
T ss_pred ---eEEEEEC-CCC-C-HHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc---cC
Confidence 3677765 221 1 111221 357888888899999998888 88888999999999999999874211 11
Q ss_pred cccccCCCCcceEEEecccccccccccceeeeec-cccccccC-------------------------Ccc--hh-HHHH
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI-PKELLFSD-------------------------GFP--VA-KDFN 308 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~-~~~~~~~~-------------------------~~~--~~-~~~~ 308 (433)
++ .+ +..+++.|++|.++-.|--+|.+++ +....... ..+ +. +...
T Consensus 202 p~-~~----GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (437)
T PRK05613 202 PL-EL----GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARA 276 (437)
T ss_pred hH-Hh----CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHH
Confidence 11 22 1248899999998744544554444 32210000 000 00 0011
Q ss_pred HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 309 RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 309 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
..........++.....+. .+.+.+..+.++..++...+.+.|+++
T Consensus 277 ~~~~~~G~~~~p~~a~l~~-----rgl~TL~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 277 GLLRDTGATLSPFNAWVTA-----QGLDTLSLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred HHHHhcCCCCCHHHHHHHH-----cccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 1122222223333332222 334456777778889999999999987
No 333
>PLN02452 phosphoserine transaminase
Probab=99.60 E-value=1.3e-12 Score=123.62 Aligned_cols=333 Identities=12% Similarity=0.099 Sum_probs=200.1
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhccc-CCCCCCCCC-CCCCHHHHHHHHHHHhccCCCCCC-c-EEEcCChHHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALST-QEGYSGYGA-EQGEKPLRAAIASTFYKDLGIEEG-D-IFVSDGAKCDI 139 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~Y~~-~~g~~~lr~~la~~l~~~~~~~~~-~-i~~~~G~~~al 139 (433)
..++|+-|. ...|+.|++++.+.+.++.. ..+....++ ..-..++-+.+.+.|.+-++++.+ + +++..|++.++
T Consensus 7 ~~~~f~pGP--~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ 84 (365)
T PLN02452 7 RVFNFSAGP--ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQF 84 (365)
T ss_pred ceEeeeCCC--CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHH
Confidence 357777764 46899999999987654321 011111211 233344444454555444465322 3 45667888889
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhh--hhhHHHhCCcccccccccccceEEEeecCccCCcccC---CCCCCCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAY--VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD---LSTVARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~l~~ 213 (433)
.+ +..++.+|+++++...+.++- ...++.+|.. .++.........-.++ ++..++++.+.+|+
T Consensus 85 ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h 153 (365)
T PLN02452 85 AAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKT-----------NVIASGKDEKYTKIPSVSEWELTPDAKFVHICA 153 (365)
T ss_pred HHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCC-----------cEEEecCCCCCCCCCChHHcCCCCCCcEEEECC
Confidence 97 588899999999888877763 3444555531 1111111100000122 23335788888888
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
....||+.+++ ++++. ++++|+|.+.+.. ..+.++..+ + +.+.|..|.+|.+| +|++++++
T Consensus 154 nETstGv~~~~--~~~i~------~~~lvVDa~Ss~g---~~pidv~~~----~--v~~~saqK~lGP~G--l~~v~vr~ 214 (365)
T PLN02452 154 NETIHGVEFKD--YPDVG------NVPLVADMSSNFL---SKPVDVSKY----G--VIYAGAQKNVGPSG--VTIVIIRK 214 (365)
T ss_pred CCCCCcEecCc--ccccC------CCeEEEECCcccc---CcccCHHHc----C--EEEEecccccCCCC--eEEEEEcH
Confidence 88899996432 44443 3899999988732 224444333 2 23468899999888 79999999
Q ss_pred cccccCCcc--hhHHHHHHH--hhccCCCcHHHHHHHHHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhc-CCeee--c
Q 045431 294 ELLFSDGFP--VAKDFNRIV--CTCFNGASNISQAGGLACLSPEGFK-AVHEVIGFYKENTDIIVETFNSL-GFKVY--G 365 (433)
Q Consensus 294 ~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~-g~~~~--~ 365 (433)
+.+.+.... ..-++.... ....++++.....++.++++-...+ .++.+.++.+++++++++.|++. |+... .
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~ 294 (365)
T PLN02452 215 DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVE 294 (365)
T ss_pred HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 887431111 011111111 1122344555555444444421112 36899999999999999999986 76211 1
Q ss_pred C--CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHHHhh
Q 045431 366 G--KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFKHLY 432 (433)
Q Consensus 366 ~--~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~~~l 432 (433)
+ .+.+.+.+.+++....+.+.+.++++|+...+|..- -+.+|+|.++ +.++++.+++.|+++-
T Consensus 295 ~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~----~gg~R~s~yna~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 295 KSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred hHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCccc----cCceEEECcCCCCHHHHHHHHHHHHHHH
Confidence 1 245567778775444445555566779999998752 2239999754 8999999999998863
No 334
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.60 E-value=1.3e-12 Score=124.27 Aligned_cols=298 Identities=13% Similarity=0.118 Sum_probs=181.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH-HHhcCCCCEEEEeCCCChhhhhh-HHHhCCccccc
Q 045431 99 SGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL-QIVFGSNVTMAVQDPSYPAYVDS-SVIMGQTGEFQ 176 (433)
Q Consensus 99 ~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l-~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~ 176 (433)
..|+.+....+|.+++++++ |. +.++.+++++.++.++ ...++|||.| +..+|...... +...|.
T Consensus 72 d~Yagd~s~~~LE~~vAe~l----G~--e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga----- 138 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYY----GF--KHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGG----- 138 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHH----CC--CeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCc-----
Confidence 45877888999999999997 54 4689998999888875 4457999965 55545443333 555553
Q ss_pred ccccccceEEEeec-----------Ccc-CCcccC-CCC------CCCccEEEEcCCCCcc-ccCCCHHHHHHHHHHHHH
Q 045431 177 KDAEKYGKIEYMRC-----------TAE-NGFFPD-LST------VARTDIIFFCSPNNPT-GAAATREQLTRLVQFAKD 236 (433)
Q Consensus 177 ~~~~~~~~~~~~~~-----------~~~-~~~~~~-~~~------~~~~~~i~l~~p~nPt-G~~~~~~~~~~i~~~a~~ 236 (433)
+++.+ ++. +.++++ +++ .+++.++.+.+++|.. |++.|.+++++|.++|++
T Consensus 139 ---------~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~ 209 (460)
T PRK13237 139 ---------IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK 209 (460)
T ss_pred ---------EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH
Confidence 12211 111 122221 111 1345567777888888 799999999999999999
Q ss_pred cCCEEEEecccccccc-------CC-CCCccc----ccCCCCcceEEEecccccccccccceeeeeccccccccCCcchh
Q 045431 237 NGSIIVYDSAYALYIS-------DD-NPRSIF----EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVA 304 (433)
Q Consensus 237 ~~~~li~De~~~~~~~-------~~-~~~~~~----~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 304 (433)
||+.||+|.++..-.. .+ ...++. ++....| +...|++|.++.+ . -|+++++++.+ .
T Consensus 210 ~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD--~~t~S~~K~~~~~-~-GG~i~t~D~eL-------~ 278 (460)
T PRK13237 210 HGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYAD--GCTMSGKKDCLVN-I-GGFLAMNDEEL-------F 278 (460)
T ss_pred cCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCc--EEEEeCCCCCCCC-C-ceEEEECCHHH-------H
Confidence 9999999999873210 11 022322 1111122 6667899988644 1 38888877665 3
Q ss_pred HHHHHHHhh----ccC-CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC--
Q 045431 305 KDFNRIVCT----CFN-GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP-- 377 (433)
Q Consensus 305 ~~~~~~~~~----~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~-- 377 (433)
++++..... .+. +.+.--..+....+.+... ....++--...++|.+.|.+.|+.+..|.+|..++++..
T Consensus 279 ~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~ 355 (460)
T PRK13237 279 DEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRF 355 (460)
T ss_pred HHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHh
Confidence 455443211 111 2222122222222332111 122233334567888999999999999889988888643
Q ss_pred --C-----CChHHHHHHHHHcCCeEecC-CCC-CC--CCC-------CCeEEEeec---cChhHHHHHHHHHHHhh
Q 045431 378 --G-----RSSWDVFSEILEKTHVVTTP-GSG-FG--PGG-------EGFIRVSAF---GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 378 --~-----~~~~~~~~~l~~~~gi~v~~-g~~-f~--~~~-------~~~iRi~~~---~~~~~l~~~l~~l~~~l 432 (433)
+ .....+..+|..+.||.-.- |+. ++ +.+ -..+|+++- -|.+.++-..++|..+.
T Consensus 356 lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~ 431 (460)
T PRK13237 356 LPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLY 431 (460)
T ss_pred CCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHH
Confidence 2 24566777887787886531 222 11 111 257999962 37888888888887653
No 335
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.59 E-value=2.6e-12 Score=119.78 Aligned_cols=304 Identities=18% Similarity=0.183 Sum_probs=184.9
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHh-cCCCCEEEEe
Q 045431 78 PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIV-FGSNVTMAVQ 155 (433)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l-~~~gd~Vl~~ 155 (433)
-....+++.+.+.. ..+.. ++ -..++.+++++|+ | ....+.+++++.|+.+ +.++ +.|||.|+++
T Consensus 14 ~~~e~~~v~~vl~s----g~i~~-G~--~v~~FE~~~ae~~----G--~k~ava~~sgT~AL~laL~al~ig~GDeVI~p 80 (374)
T COG0399 14 GEEELAAVQEVLKS----GWLTG-GP--FVRRFEQAFAEYL----G--VKYAVAVSSGTAALHLALLALAIGPGDEVIVP 80 (374)
T ss_pred chHHHHHHHHHHHc----CCeec-Ch--HHHHHHHHHHHHh----C--CCeEEEecChHHHHHHHHHhcCCCCCCEEEec
Confidence 35666777777763 33322 33 5689999999997 5 4577888888888887 5433 6999999999
Q ss_pred CCCChhhhhhHHHhCCcccccccccccceEEEeecCccC-CcccC-CCC--CCCccEEEEcCCCCccccCCCHHHHHHHH
Q 045431 156 DPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN-GFFPD-LST--VARTDIIFFCSPNNPTGAAATREQLTRLV 231 (433)
Q Consensus 156 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~--~~~~~~i~l~~p~nPtG~~~~~~~~~~i~ 231 (433)
+-+|......+...| ++++++++|++. +++++ +++ ++++|+|+.. +-.|...+ +.+|.
T Consensus 81 s~TfvATan~i~~~G------------a~PVFvDid~~T~nid~~~ie~aIt~~tKAIipV---hl~G~~~d---m~~i~ 142 (374)
T COG0399 81 SFTFVATANAVLLVG------------AKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPV---HLAGQPCD---MDAIM 142 (374)
T ss_pred CCchHHHHHHHHHcC------------CeEEEEecCCcccCCCHHHHHHHcccCCeEEEEe---hhccCCCC---HHHHH
Confidence 999999999999999 588899998652 23322 222 4679998854 34677665 88888
Q ss_pred HHHHHcCCEEEEeccccc-cccCCCCCcccccCCCCcceEEEecc--cccccccccceeeeeccccccccCCcchhHHHH
Q 045431 232 QFAKDNGSIIVYDSAYAL-YISDDNPRSIFEIPGAKEVAIETSSF--SKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN 308 (433)
Q Consensus 232 ~~a~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~vi~i~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 308 (433)
++|++||++||+|.+++. ..+.+. ..-++ .+ +-+.|| .|.+. .| --|.++.+++.+ .++++
T Consensus 143 ~la~~~~l~vIEDaAqa~Ga~y~gk--~vGt~---Gd--~~~fSF~~~K~it-tg-EGGav~tnd~el-------a~k~~ 206 (374)
T COG0399 143 ALAKRHGLPVIEDAAQAHGATYKGK--KVGSF---GD--IGAFSFHATKNLT-TG-EGGAVVTNDEEL-------AEKAR 206 (374)
T ss_pred HHHHHcCCeEEEEcchhccCeecCc--ccccc---cc--eEEEEecCCCCcc-cc-CceEEEeCCHHH-------HHHHH
Confidence 899999999999999985 223332 22233 22 555666 68887 55 458888887765 33333
Q ss_pred HHHhhcc----------------CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCC-Cc-
Q 045431 309 RIVCTCF----------------NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGK-NA- 369 (433)
Q Consensus 309 ~~~~~~~----------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~g- 369 (433)
.++.... ...+-+.+ ++-.. ..+.++++.++-++..+...+.|+++ ++.+.... +.
T Consensus 207 ~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqA--Aigl~---QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~ 281 (374)
T COG0399 207 SLRNHGLSRDAVFKYLHEELGYNYRLTEIQA--AIGLA---QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAV 281 (374)
T ss_pred HHHHhCcCCCccccceeeecccccCHHHHHH--HHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCce
Confidence 3322211 11111211 12111 12334555555556666677777776 34433222 22
Q ss_pred --cE-EEEECCCC-ChHHHHHHHHHcCCeE----ecCCCCC--------CC--C-------CCCeEEEee--ccChhHHH
Q 045431 370 --PY-VWVQFPGR-SSWDVFSEILEKTHVV----TTPGSGF--------GP--G-------GEGFIRVSA--FGHRGNVL 422 (433)
Q Consensus 370 --~~-~~~~~~~~-~~~~~~~~l~~~~gi~----v~~g~~f--------~~--~-------~~~~iRi~~--~~~~~~l~ 422 (433)
.+ ..+.++.. ...+.+...+++.||. ..|-... .+ . ....+.|-+ ..++++++
T Consensus 282 ~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~ 361 (374)
T COG0399 282 HAWHLYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVD 361 (374)
T ss_pred eeeeeeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHH
Confidence 22 22344432 3444555556666544 4442221 00 0 023466654 34899999
Q ss_pred HHHHHHHHhhC
Q 045431 423 EACKRFKHLYK 433 (433)
Q Consensus 423 ~~l~~l~~~l~ 433 (433)
+.++.|+++++
T Consensus 362 ~V~~~l~~~~~ 372 (374)
T COG0399 362 RVIEALKEVLG 372 (374)
T ss_pred HHHHHHHHHhc
Confidence 99999998763
No 336
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.59 E-value=4.9e-13 Score=134.13 Aligned_cols=186 Identities=13% Similarity=0.101 Sum_probs=114.4
Q ss_pred CCCCCCCCCH-HHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhh-HHHhCCcccc
Q 045431 99 SGYGAEQGEK-PLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDS-SVIMGQTGEF 175 (433)
Q Consensus 99 ~~Y~~~~g~~-~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~ 175 (433)
.+...+.|.. +-.+.+|+.+ |++ .--++++|++.++.+ +.+++.+||.|+++.+||.++.+. +.+.|..+++
T Consensus 167 ddL~~~eG~i~eAq~~AA~~f----gAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVY 241 (720)
T PRK13578 167 GDLLIHEGAAKDAQKHAAKVF----NAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVY 241 (720)
T ss_pred CCCCCCChHHHHHHHHHHHHh----CCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEE
Confidence 3333444544 4444444443 544 567899999999986 788999999999999999999885 8889976554
Q ss_pred ccccc-ccceEEEeecCc--cCCcccCCCCC--------CCccEEEEcCCCCccccCCCHHHHHHHHHH-HHHcCCEEEE
Q 045431 176 QKDAE-KYGKIEYMRCTA--ENGFFPDLSTV--------ARTDIIFFCSPNNPTGAAATREQLTRLVQF-AKDNGSIIVY 243 (433)
Q Consensus 176 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~-a~~~~~~li~ 243 (433)
..... .+.-+-.++... ...+...+.+. .+.++++|++|++ -|++++ +++|++. ++.++ +|++
T Consensus 242 l~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llv 316 (720)
T PRK13578 242 LETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILF 316 (720)
T ss_pred eeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEE
Confidence 32221 000000011000 00000001111 2258999999866 899999 6778777 57777 9999
Q ss_pred eccccc-cccCCC----CCcccccCCCCcceEEEecccccccccccce-eeeecccccc
Q 045431 244 DSAYAL-YISDDN----PRSIFEIPGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELL 296 (433)
Q Consensus 244 De~~~~-~~~~~~----~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~ 296 (433)
||+|.. +.|.+. +.+..+....+.-++++-|.+|++ +++.. +++......+
T Consensus 317 DEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk~~~i 373 (720)
T PRK13578 317 DSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKKDNHI 373 (720)
T ss_pred eCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcCCccc
Confidence 999986 445432 112122222223568899999998 56654 5776765443
No 337
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.59 E-value=1.3e-13 Score=138.15 Aligned_cols=304 Identities=13% Similarity=0.108 Sum_probs=165.7
Q ss_pred CCCCCCCCH-HHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccc
Q 045431 100 GYGAEQGEK-PLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQK 177 (433)
Q Consensus 100 ~Y~~~~g~~-~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 177 (433)
+...+.|.. +..+.+|+.+ +++ ..-++++|++.++.+ +.+++.+||.|+++..||.+..+.+.+.|..+++..
T Consensus 189 dLl~~~G~i~eAe~~AA~~f----gAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~ 263 (714)
T PRK15400 189 SLLDHSGPHKEAEEYIARVF----NAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFR 263 (714)
T ss_pred CCCCCChHHHHHHHHHHHHh----CCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEec
Confidence 333444544 4444444443 544 567899999999886 688999999999999999999999999997554322
Q ss_pred ccc-ccceEEEeecCc--cCCcccCCCCCCCcc---EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccc-
Q 045431 178 DAE-KYGKIEYMRCTA--ENGFFPDLSTVARTD---IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALY- 250 (433)
Q Consensus 178 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~- 250 (433)
... .+.-+-.++... ...+...++..++.+ .++|++|++ .|++++ +++|++.|+.++ |++||+|..+
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~ 337 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYT 337 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhh
Confidence 111 000000000000 000000112223333 788888854 899999 577777777776 7899999863
Q ss_pred ccCCCC--Cccccc-CCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhhccCCCcH----HH
Q 045431 251 ISDDNP--RSIFEI-PGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASN----IS 322 (433)
Q Consensus 251 ~~~~~~--~~~~~~-~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 322 (433)
.|.+.. .+.... +..++.++++-|.+|++ +++.. +++.+... + + .+++++......++++. .+
T Consensus 338 ~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~-v--d----~~~~n~a~~m~~STSPsY~l~AS 408 (714)
T PRK15400 338 NFSPIYEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGD-V--N----EETFNEAYMMHTTTSPHYGIVAS 408 (714)
T ss_pred ccCcccCCcChhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcCC-C--C----HHHHHHHHHHHcCCCcHHHHHHH
Confidence 444321 111211 11124568999999998 56654 46656443 2 1 23444433322222222 23
Q ss_pred HHHHHHhcCc-CChhHHHHHHHHHHHHHHHHHHHHhhc-C------CeeecCCC----------------c---------
Q 045431 323 QAGGLACLSP-EGFKAVHEVIGFYKENTDIIVETFNSL-G------FKVYGGKN----------------A--------- 369 (433)
Q Consensus 323 q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~-g------~~~~~~~~----------------g--------- 369 (433)
..++.+++.. .+ +++.+...+....+++.+.+. + +.+..+.. |
T Consensus 409 LD~a~~~m~~~~G----~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~ 484 (714)
T PRK15400 409 TETAAAMMKGNAG----KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHM 484 (714)
T ss_pred HHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccccccccc
Confidence 3334444542 33 344444455555555555544 3 33332110 1
Q ss_pred ----cEEEEECCCC----------ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 370 ----PYVWVQFPGR----------SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 370 ----~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
.=+.+..++. -+...+...|+++||.+.-.+.+. -.+-++++.+.++++.+++.|.++
T Consensus 485 ~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~----iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 485 YLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYN----LLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred ccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCe----EEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0134444331 123344445577799996543221 123333566888888888888764
No 338
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.58 E-value=3e-13 Score=127.57 Aligned_cols=354 Identities=10% Similarity=0.054 Sum_probs=212.4
Q ss_pred HHHHHHhcCCCCceEEecCCCC---CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCC-CCCC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT---TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG-IEEG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~---~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~-~~~~ 127 (433)
..+......+++.+||-..|-- --...+++.+++.+++.+... ........ ....+|-+.|++.. + -+-+
T Consensus 33 aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~-~~~~~~t~-~Pa~~LA~~L~~~a----P~~~l~ 106 (449)
T COG0161 33 AEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPH-VMFGGFTH-EPAIELAEKLAELA----PEGGLD 106 (449)
T ss_pred cceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCc-hhhcccCC-chHHHHHHHHHHhC----CCCCcc
Confidence 3344444556667777554431 123578999999999987642 11112222 22556666666654 4 3368
Q ss_pred cEEEcCChHHHHHH-HHHhc-------CCC-CEEEEeCCCChhhhhhHHHhCC-cccccc-cccccceEEEeecCc----
Q 045431 128 DIFVSDGAKCDISR-LQIVF-------GSN-VTMAVQDPSYPAYVDSSVIMGQ-TGEFQK-DAEKYGKIEYMRCTA---- 192 (433)
Q Consensus 128 ~i~~~~G~~~al~~-l~~l~-------~~g-d~Vl~~~p~~~~~~~~~~~~g~-~~~~~~-~~~~~~~~~~~~~~~---- 192 (433)
.|++++|++++++. +.... +|. .+++.-..+|++..-.....|. ...++. ++........++...
T Consensus 107 ~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~ 186 (449)
T COG0161 107 HVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRR 186 (449)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccccc
Confidence 99999999999986 42111 333 3488899999876433333332 111211 111112232333321
Q ss_pred --cCCcccC-------CCC-----CCCccEEEEcCC--CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 193 --ENGFFPD-------LST-----VARTDIIFFCSP--NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 193 --~~~~~~~-------~~~-----~~~~~~i~l~~p--~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
++...++ +++ .+..-+.++..| +.-+|+.+ ++..++++.++|++||+++|.||+-..|...|.
T Consensus 187 ~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~ 266 (449)
T COG0161 187 GFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK 266 (449)
T ss_pred CCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch
Confidence 1111111 111 123344566677 44477665 666899999999999999999999998887776
Q ss_pred CCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHH-----HHHhhccCCCcHHHHHHHHHhc
Q 045431 256 PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN-----RIVCTCFNGASNISQAGGLACL 330 (433)
Q Consensus 256 ~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~q~~~~~~l 330 (433)
.+......-.+| ++ +++|.+...-+.+|.+++++++. +.+. .+.+..+.+.++++.+++++.|
T Consensus 267 ~FA~e~~gi~PD-i~---~~aKGLT~GY~Pl~a~l~~~~I~--------~~~~~~~~~~f~HG~TYsghPlacAaAla~L 334 (449)
T COG0161 267 MFACEHAGIVPD-IL---CLAKGLTGGYLPLSAVLTSDRIY--------EAFSDGDAGAFMHGHTYSGNPLACAAALANL 334 (449)
T ss_pred hhhhhhcCCCCC-ee---eecccccccchhhHhHhhhHHHH--------HHHhcccCCeeccCCccccCHHHHHHHHHHH
Confidence 543333333344 33 68999875557889888888874 3332 2445566778899999888877
Q ss_pred CcCChhHHHHHHHHHHHHHHHHHHHHhh-c-CCeeecC--CCccEEEEECCC-CC--------hHHHHHHHHHcCCeEec
Q 045431 331 SPEGFKAVHEVIGFYKENTDIIVETFNS-L-GFKVYGG--KNAPYVWVQFPG-RS--------SWDVFSEILEKTHVVTT 397 (433)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~--~~g~~~~~~~~~-~~--------~~~~~~~l~~~~gi~v~ 397 (433)
+-... +.+.++.++...++.+.|++ + +...+.. .-|+..-+++.. .. ....+...+.++|+.++
T Consensus 335 ~i~e~---e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iR 411 (449)
T COG0161 335 DILEE---EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIR 411 (449)
T ss_pred HHHHh---cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEe
Confidence 63222 44555566677777777776 2 2222211 246666666642 11 13344445556699999
Q ss_pred CCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhhC
Q 045431 398 PGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 398 ~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
|.. +.+=++ +..+++++++.+++++++++
T Consensus 412 p~g-------~~i~~~PPliit~~eid~l~~~l~~al~ 442 (449)
T COG0161 412 PLG-------DVIYLMPPLIITREEIDELVDALREALD 442 (449)
T ss_pred ecC-------CEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence 862 245555 46799999999999998763
No 339
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.57 E-value=1.6e-12 Score=126.80 Aligned_cols=349 Identities=8% Similarity=0.047 Sum_probs=188.5
Q ss_pred HHHHHhcC-CCCceEEecCCCC--CC-CChHHHHH--HHHHHHhhcccCC-CCCCCCCCCCCHHHHHHHHHHHhccC-CC
Q 045431 53 KAAHMLKY-PDAEVISLGIGDT--TE-PIPEVITS--ALAKRSYALSTQE-GYSGYGAEQGEKPLRAAIASTFYKDL-GI 124 (433)
Q Consensus 53 ~~~~~~~~-~~~~~i~l~~g~~--~~-~~~~~~~~--a~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~la~~l~~~~-~~ 124 (433)
.+...... +++..||+..|.- .+ ..+|.+.+ ++.+++.+..... ....+ . .+....+++.+.+.. +-
T Consensus 34 ~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~-~----~~~~~~la~~l~~~~~p~ 108 (443)
T PRK08297 34 QGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDV-Y----TVEMARFVDTFARVLGDP 108 (443)
T ss_pred cCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCc-C----CHHHHHHHHHHHhhcCCC
Confidence 33334443 6778899876643 22 36788888 9998886532101 11122 1 123333444443211 12
Q ss_pred CCCcEEEcCChHHHHHHHHHhc---------CC------CCEEEEeCCCChhhhhhHHHhCC-cccccccccccceEEEe
Q 045431 125 EEGDIFVSDGAKCDISRLQIVF---------GS------NVTMAVQDPSYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYM 188 (433)
Q Consensus 125 ~~~~i~~~~G~~~al~~l~~l~---------~~------gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~ 188 (433)
..+.|++++++++|......+. .. ..+|+....+|++.......... ......... ......+
T Consensus 109 ~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~-~~~~~~~ 187 (443)
T PRK08297 109 ELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFP-KFDWPRI 187 (443)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCC-CCCcccc
Confidence 3469999999999988632222 01 25799999999886544443321 111000000 0000001
Q ss_pred -------ecCccC--Cc-------ccC----CCC-CCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEec
Q 045431 189 -------RCTAEN--GF-------FPD----LST-VARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDS 245 (433)
Q Consensus 189 -------~~~~~~--~~-------~~~----~~~-~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De 245 (433)
+..... .. ..+ ++. ..++.+|++ .| +.-.|. ..+++.+++|.++|++||+++|.||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~-EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DE 266 (443)
T PRK08297 188 DNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIA-EPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDE 266 (443)
T ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 100000 00 000 111 135555554 55 444454 4688999999999999999999999
Q ss_pred cccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHH-HHHhhccCCCcHHHHH
Q 045431 246 AYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN-RIVCTCFNGASNISQA 324 (433)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~q~ 324 (433)
++.+|...|.......++-.+| ++ +|+|.++ +|.+++.+++... . ...+. .....++.+.++++.+
T Consensus 267 V~tGfGRtG~~~a~~~~gv~PD-iv---~~gK~l~-----~~a~l~~~~i~~~-~---~~~~~~~~~~~~T~~gnpl~~a 333 (443)
T PRK08297 267 VQTGVGLTGTAWAYQQLGVRPD-IV---AFGKKTQ-----VCGIMAGRRVDEV-E---DNVFAVSSRINSTWGGNLVDMV 333 (443)
T ss_pred hhhccCccchHHHHHhcCCCCC-EE---Eeccccc-----ccceecchHHHHh-h---hhhccCccccCCCCCccHHHHH
Confidence 9998766554322222322344 23 5799874 2333333332100 0 00010 1123455667888888
Q ss_pred HHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh----cC-Ce-eecCCCccEEEEECCCCC-hHHHHHHHHHcCCeEec
Q 045431 325 GGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS----LG-FK-VYGGKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTT 397 (433)
Q Consensus 325 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g-~~-~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~ 397 (433)
++.+.++.... +++.++.++..+++.+.|++ +. +. .+.+ .|.++.+.++... ...+...++ ++||.+.
T Consensus 334 aa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~~ 408 (443)
T PRK08297 334 RARRILEVIEE---DGLVENAARQGEYLLARLEELAAEFPAVVSNVRG-RGLMCAFDLPTTADRDEVIRRLW-EEGVLVL 408 (443)
T ss_pred HHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec-cceEEEEEecCHHHHHHHHHHHH-HCCEEEe
Confidence 88888762211 23334444555555555544 32 21 2233 4677778886322 335556665 5599997
Q ss_pred CCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 398 PGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 398 ~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
|+. .+.+||+ +..+++++++++++|.+++
T Consensus 409 ~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l 439 (443)
T PRK08297 409 PCG------ERSIRFRPALTVTTEEIDAAIDALRRAL 439 (443)
T ss_pred cCC------CCeEEEECCccCCHHHHHHHHHHHHHHH
Confidence 742 3568885 6779999999999998876
No 340
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.56 E-value=1.9e-12 Score=113.43 Aligned_cols=282 Identities=12% Similarity=0.081 Sum_probs=179.5
Q ss_pred CcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChh--hhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CC-
Q 045431 127 GDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPA--YVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LS- 201 (433)
Q Consensus 127 ~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 201 (433)
.-.++...++.+++. +..++.|||+|++-.-+-.+ ..+..+.+| +++..++.+.......+ +.
T Consensus 69 ~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~g------------a~V~~v~~~~G~~~~le~i~~ 136 (385)
T KOG2862|consen 69 QTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYG------------AEVDVVEADIGQAVPLEEITE 136 (385)
T ss_pred ceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhC------------ceeeEEecCcccCccHHHHHH
Confidence 344455556788886 78899999999886665444 356667777 47777776654332222 11
Q ss_pred --CCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc
Q 045431 202 --TVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA 279 (433)
Q Consensus 202 --~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~ 279 (433)
...+++++++++-...||+.-+ -+..+.++|++|++++++|.+-+- .+.++ .+|... ..+......|.+
T Consensus 137 ~lsqh~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaSl---ggt~F---~mDewg-VDvaytgSQKaL 207 (385)
T KOG2862|consen 137 KLSQHKPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVASL---GGTEF---EMDEWG-VDVAYTGSQKAL 207 (385)
T ss_pred HHHhcCCceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhhc---CCccc---eehhhc-ccEEEecchhhc
Confidence 1368999999988889999755 256677888999999999998773 12222 233322 224444458988
Q ss_pred cccccceeeeecccccccc----CC---cchhHH---HHHHH-----hhccCCCcHHHHHHHHHhcCcCChhHHHHHHHH
Q 045431 280 GFTGVRLGWTVIPKELLFS----DG---FPVAKD---FNRIV-----CTCFNGASNISQAGGLACLSPEGFKAVHEVIGF 344 (433)
Q Consensus 280 ~~~G~r~G~l~~~~~~~~~----~~---~~~~~~---~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 344 (433)
|.| -.++-+..++..+.+ +. .-+.+. ++-+. .....+++....+...++|....++.+++.+++
T Consensus 208 ~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~r 286 (385)
T KOG2862|consen 208 GAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRR 286 (385)
T ss_pred CCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 843 235667666655311 00 000000 00000 112234454444544455554445668999999
Q ss_pred HHHHHHHHHHHHhhcCCeeecC---CCc-cEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--c-c
Q 045431 345 YKENTDIIVETFNSLGFKVYGG---KNA-PYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--F-G 416 (433)
Q Consensus 345 ~~~~~~~l~~~l~~~g~~~~~~---~~g-~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~-~ 416 (433)
.++..+.++..|+++|++.... ... ..-.+.+| +.+-.+++..+..++++.+..|- ++.....+||.+ + .
T Consensus 287 H~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~ggl--g~~~gKv~RIGl~gcna 364 (385)
T KOG2862|consen 287 HREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGL--GPTVGKVFRIGLLGCNA 364 (385)
T ss_pred HHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEecccc--CCCcccEEEEEEeeccC
Confidence 9999999999999998765321 111 23456666 66778899998888788875543 455678999994 2 3
Q ss_pred ChhHHHHHHHHHHHhh
Q 045431 417 HRGNVLEACKRFKHLY 432 (433)
Q Consensus 417 ~~~~l~~~l~~l~~~l 432 (433)
+.+.++..++.|+.++
T Consensus 365 ~~e~i~~v~~ll~~al 380 (385)
T KOG2862|consen 365 NVEYIDNVVELLKLAL 380 (385)
T ss_pred CcHHHHHHHHHHHHHH
Confidence 7899999999988765
No 341
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.55 E-value=3.8e-12 Score=133.19 Aligned_cols=319 Identities=14% Similarity=0.110 Sum_probs=193.9
Q ss_pred EecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC-----CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 67 SLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA-----EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 67 ~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
..+.|.++.-.|+.+.+.+.+.- ..+..|+| ++|..+..-.....+.+..|.++.|+.+..+++++.++
T Consensus 80 ~ig~G~y~~~~P~vi~~~i~~~~------~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea 153 (954)
T PRK05367 80 YIGQGYYGTHTPPVILRNILENP------AWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEA 153 (954)
T ss_pred ccCCCCCCCcCcHHHHHHHHhCc------chhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHH
Confidence 45677766556776655555521 33455554 23443333333333333448999999999999999986
Q ss_pred H-HHh-cCC--CCEEEEeCCCChhhhhhHHHh-CCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCC
Q 045431 142 L-QIV-FGS--NVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNN 216 (433)
Q Consensus 142 l-~~l-~~~--gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~n 216 (433)
+ .++ .++ +|+|++++.+|+.....++.. ...| .+++.++.+.+ ++ ..++.++++.+| |
T Consensus 154 ~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G---------~ev~~~~~~~d------~~-~~~~~~vlvq~p-~ 216 (954)
T PRK05367 154 MALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLG---------IEVVVGDAAKA------LD-HDDVFGVLLQYP-G 216 (954)
T ss_pred HHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCC---------CEEEEecCccC------CC-cccEEEEEEecC-C
Confidence 4 333 345 489999999999988766443 2222 37777776431 11 134555555576 5
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccc-----ccccccceeeeec
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKY-----AGFTGVRLGWTVI 291 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~-----~~~~G~r~G~l~~ 291 (433)
-+|.+.+ +++|+++|+++|+++++|....-+... .+..++ +..|+++|..|+ +|-| -.||+.+
T Consensus 217 ~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~l---~~pge~----GaDi~vgs~qkfg~P~g~GGP--~aGflav 284 (954)
T PRK05367 217 TSGEVRD---YTALIAAAHARGALVAVAADLLALTLL---TPPGEM----GADIAVGSAQRFGVPMGFGGP--HAAYFAV 284 (954)
T ss_pred CCeeecc---HHHHHHHHHHcCCEEEEEehhhhccCC---CChhhc----CCCEEEeeCcccCCCCCCCCC--CEEEEEE
Confidence 6999876 899999999999999998755322211 112222 334899999998 5434 4899999
Q ss_pred cccccccCCcchhH--------------------HHHHHHhhccCCCcHHHHHHHHHh--cCcCChhHHHHHHHHHHHHH
Q 045431 292 PKELLFSDGFPVAK--------------------DFNRIVCTCFNGASNISQAGGLAC--LSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 292 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~q~~~~~~--l~~~~~~~~~~~~~~~~~~~ 349 (433)
++++...--.++.. .+++.+..++.+++. ...++.+. +.-.+...+++..++...+.
T Consensus 285 r~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~q-aL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la 363 (954)
T PRK05367 285 RDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQ-VLLAVMASMYAVYHGPEGLKAIARRVHRLA 363 (954)
T ss_pred CHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 98775221111111 111211222221111 11111111 11122245688888999999
Q ss_pred HHHHHHHhhcCCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHH
Q 045431 350 DIIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKR 427 (433)
Q Consensus 350 ~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~ 427 (433)
+++.+.|++.|+++..+...--+.++++ .+..++.++++++ ||.+.. ..++.+|+|+ +++++||+.+++.
T Consensus 364 ~~l~~~L~~~G~~~~~~~~f~~~~~~~~-~~~~~i~~~l~~~-gi~~~~------~~~~~l~is~~e~~t~~did~l~~~ 435 (954)
T PRK05367 364 AILAAGLRALGLEVVHDSFFDTLTVEVG-GDAAAVLARALAA-GINLRR------VDDDHVGISLDETTTREDLAALLAV 435 (954)
T ss_pred HHHHHHHHhcCcccCCCCCCCeEEEeCC-CCHHHHHHHHHHC-Cceecc------ccCCEEEEEecccCCHHHHHHHHHH
Confidence 9999999888888764322222445554 3567777777655 998832 1246799995 6689999999999
Q ss_pred HH
Q 045431 428 FK 429 (433)
Q Consensus 428 l~ 429 (433)
|.
T Consensus 436 l~ 437 (954)
T PRK05367 436 FG 437 (954)
T ss_pred Hc
Confidence 86
No 342
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.55 E-value=1.9e-12 Score=111.31 Aligned_cols=279 Identities=15% Similarity=0.184 Sum_probs=180.4
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccce
Q 045431 106 GEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGK 184 (433)
Q Consensus 106 g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 184 (433)
.+..+.+.+++|+ ++ |.+-+|+|+.++-.+ ..+++.+||.|+++..+|....-+.+.+| ++
T Consensus 62 pI~~F~~dlaeFl----g~--D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAErag------------l~ 123 (382)
T COG1103 62 PIKDFLEDLAEFL----GM--DEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAG------------LN 123 (382)
T ss_pred cHHHHHHHHHHHh----CC--ceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcC------------Ce
Confidence 3566777799997 54 678899999999887 58889999999999999988888888888 47
Q ss_pred EEEeecCccCCcccCCCC-----------C-CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Q 045431 185 IEYMRCTAENGFFPDLST-----------V-ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252 (433)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~-----------~-~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~ 252 (433)
+..+|......+..+++. . ..+.+.+|++|..-.|.. .+.++++++|+++|++++...+|.....
T Consensus 124 v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~Grm 200 (382)
T COG1103 124 VAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTVGRM 200 (382)
T ss_pred EEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceeeccc
Confidence 777775433333333221 1 347778888887667765 4489999999999999999999984211
Q ss_pred CCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHH-----------hhc-cCCCcH
Q 045431 253 DDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIV-----------CTC-FNGASN 320 (433)
Q Consensus 253 ~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~ 320 (433)
|.+..++.. .++++|-+|+++ +.-.+|.+..+.++- +.+-+.- ..+ ..+.+.
T Consensus 201 ---pvs~ke~g~----DFiVgSGHKsmA-As~PiGvl~~~eE~a--------e~V~r~Sg~~~~~KEvellGCT~rGapi 264 (382)
T COG1103 201 ---PVSGKEIGA----DFIVGSGHKSMA-ASAPIGVLAMSEEWA--------EIVLRRSGRAFPKKEVELLGCTVRGAPI 264 (382)
T ss_pred ---cccccccCC----CEEEecCccchh-ccCCeeEEeehhHHH--------HHHHhhcccccccceeeeecccccCchH
Confidence 556665532 388999999997 666899999888773 2221110 011 122222
Q ss_pred HHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeec--CCCccEEEEECCCCC---------hHHHHHHH
Q 045431 321 ISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYG--GKNAPYVWVQFPGRS---------SWDVFSEI 388 (433)
Q Consensus 321 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~---------~~~~~~~l 388 (433)
+...|..-... +. -+.++.--++.+++.+.|+++ |+.-.+ |..--.+.+..|... .--+..+
T Consensus 265 vTlmASfP~V~----eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~E- 338 (382)
T COG1103 265 VTLMASFPHVV----ER-VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEE- 338 (382)
T ss_pred HHHHhcCHHHH----HH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHH-
Confidence 22222111110 11 222334445677888888888 465443 333334444444211 1123344
Q ss_pred HHcCCeE-ecCCCCCCCCCCCeEEEeecc-ChhHHHHHHHHHHHhhC
Q 045431 389 LEKTHVV-TTPGSGFGPGGEGFIRVSAFG-HRGNVLEACKRFKHLYK 433 (433)
Q Consensus 389 ~~~~gi~-v~~g~~f~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~l~ 433 (433)
+++.||. +.||. ..+|.+|.+. +.|+++..+++++++++
T Consensus 339 LK~RgI~GI~~G~------Tk~~K~svyGl~~Eqve~V~~afkeI~e 379 (382)
T COG1103 339 LKKRGIHGIQPGQ------TKYFKLSVYGLSWEQVEYVVDAFKEIAE 379 (382)
T ss_pred HHhcCccccccCc------eeEEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 4444553 44443 5689999654 99999999999998863
No 343
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.55 E-value=2.2e-12 Score=134.39 Aligned_cols=320 Identities=14% Similarity=0.108 Sum_probs=194.4
Q ss_pred EecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCC--CC----CHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH
Q 045431 67 SLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAE--QG----EKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS 140 (433)
Q Consensus 67 ~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~--~g----~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~ 140 (433)
..+.|.++.-.|+.+.+.+.+...-+ ..++-|.+. +| ..++++.+|+++ |++++|+.++.|++++.+
T Consensus 107 fiG~G~y~~~~P~~v~~~i~~~~~~~---TaytPYqaEisQG~lqal~~~Qt~ia~Lt----G~~~anaSL~d~aTAaae 179 (993)
T PLN02414 107 YIGMGYYNTHVPPVILRNILENPGWY---TQYTPYQAEIAQGRLESLLNYQTMITDLT----GLPMSNASLLDEGTAAAE 179 (993)
T ss_pred ccCCCCCCccCCHHHHHHHHhChHHH---hhcCCCchHHHHHHHHHHHHHHHHHHHHh----CCChhhEeecCChHHHHH
Confidence 34667666668888878887755322 223334331 33 445666666665 999999999999999999
Q ss_pred HH-HHh-cCCC--CEEEEeCCCChhhhhhHHHhC-CcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCC
Q 045431 141 RL-QIV-FGSN--VTMAVQDPSYPAYVDSSVIMG-QTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPN 215 (433)
Q Consensus 141 ~l-~~l-~~~g--d~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~ 215 (433)
++ .+. +++| |+|++.+..|+.+...++... ..| .+++.++.+..+ . ....+-++++.+|+
T Consensus 180 a~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~G---------ieV~~v~~~~~~-----~-~~~~v~~vlvq~P~ 244 (993)
T PLN02414 180 AMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLG---------LEVVVADEKDFD-----Y-SSGDVCGVLVQYPA 244 (993)
T ss_pred HHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcC---------CEEEEecchhhc-----c-ccCceEEEEEecCC
Confidence 64 333 4544 789999999999887775442 223 367777764311 0 11233344444553
Q ss_pred CccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc---cccccceeeeecc
Q 045431 216 NPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA---GFTGVRLGWTVIP 292 (433)
Q Consensus 216 nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~---~~~G~r~G~l~~~ 292 (433)
.+|.+.+ +++|+++|+++|+++++ .++.. .... ..+..++ +..|++++..|+. |..|-+.||++++
T Consensus 245 -~~G~v~d---v~~I~~~ah~~GaL~iV-aad~l-al~~-l~~pge~----GADi~vgsgqKwg~P~G~GGP~aGflavr 313 (993)
T PLN02414 245 -TDGEVLD---YAEFVKNAHANGVKVVM-ATDLL-ALTM-LKPPGEW----GADIVVGSAQRFGVPMGYGGPHAAFLATS 313 (993)
T ss_pred -CCeEEcC---HHHHHHHHHHcCCEEEE-EECHH-HhcC-CCCHhhc----cCcEEEECCCccccCCCCCCCCeeEEEEC
Confidence 4999877 88999999999999998 44432 1111 1122222 2348899999986 2245568999999
Q ss_pred ccccccCCc-chhH-------------------HHHHHHhhccCCCcHHHHHHHHHhc--CcCChhHHHHHHHHHHHHHH
Q 045431 293 KELLFSDGF-PVAK-------------------DFNRIVCTCFNGASNISQAGGLACL--SPEGFKAVHEVIGFYKENTD 350 (433)
Q Consensus 293 ~~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~q~~~~~~l--~~~~~~~~~~~~~~~~~~~~ 350 (433)
+++.. ..+ ++.. +-.+....+.+..+..+..++++.+ .-.+...+++..++...+..
T Consensus 314 ~~~~r-~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~ 392 (993)
T PLN02414 314 QEYKR-LMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAG 392 (993)
T ss_pred HHHHh-hCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 87642 111 1111 1011111111111112222233211 11112346788888999999
Q ss_pred HHHHHHhhcCCeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHH
Q 045431 351 IIVETFNSLGFKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRF 428 (433)
Q Consensus 351 ~l~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l 428 (433)
++.+.|++.|+++..+....-+.++++ ...++.++|+++ ||.+.... .+.+|+|+ +++++||+.+++.|
T Consensus 393 ~l~~~L~~~G~~~~~~~~f~~vt~~~~--~~~~v~~~L~~~-gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l 463 (993)
T PLN02414 393 VFAAGLKKLGFQVQSLPFFDTVKVKCS--DADAIADAAAKV-GINLRVVD------ANTVTVSFDETTTLEDVDKLFKVF 463 (993)
T ss_pred HHHHHHhhcCCccCCCCCcCeEEEecC--CHHHHHHHHHHC-CCeeEEec------CCeEEEEeeccCCHHHHHHHHHHH
Confidence 999999888887754422223445554 456677776654 99775321 35799995 67899999999998
Q ss_pred H
Q 045431 429 K 429 (433)
Q Consensus 429 ~ 429 (433)
.
T Consensus 464 ~ 464 (993)
T PLN02414 464 A 464 (993)
T ss_pred c
Confidence 6
No 344
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=8.5e-14 Score=127.68 Aligned_cols=333 Identities=18% Similarity=0.213 Sum_probs=202.0
Q ss_pred ceEEecCCCC------CCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHH
Q 045431 64 EVISLGIGDT------TEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKC 137 (433)
Q Consensus 64 ~~i~l~~g~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~ 137 (433)
.++|+++-++ ..++.+.+.+++.+.-.... .....-+...-..++.+-+|+|+ + .++.+++.-|-..
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~c--ss~~e~G~~~~hkelE~l~A~f~----g-~e~a~vF~mGf~T 209 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRC--SSRHEAGTTEEHKELEELVARFL----G-VEDAIVFSMGFAT 209 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhccccc--ccchhcccHHHHHHHHHHHHHhc----C-CcceEEEeccccc
Confidence 3566654332 34566777766666432211 11111112223345555555554 5 4578888888433
Q ss_pred HHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCC-----cc
Q 045431 138 DISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VAR-----TD 207 (433)
Q Consensus 138 al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~~ 207 (433)
.-..+..++.||.-|+-++..|.+...-++..|+ .+....+++-.++..-+.. .++ -+
T Consensus 210 Ns~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgA------------tiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kk 277 (519)
T KOG1357|consen 210 NSMNIPSLLGKGSLIISDELNHASLITGARLSGA------------TTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKK 277 (519)
T ss_pred cccCcceeecCCcceeeccccchheeccccccCc------------eEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchh
Confidence 2223688899999999999999999888888883 6666666543332211111 111 23
Q ss_pred EEEEc-CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCC--CcceEEEeccccccccccc
Q 045431 208 IIFFC-SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGA--KEVAIETSSFSKYAGFTGV 284 (433)
Q Consensus 208 ~i~l~-~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~vi~i~S~sK~~~~~G~ 284 (433)
.+++. .--.--|.+.. +.+++.++++|..+++.||+|+-...+.......++.+. .|..|.+|+|.|++|.+|
T Consensus 278 i~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G- 353 (519)
T KOG1357|consen 278 ILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG- 353 (519)
T ss_pred eeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-
Confidence 33333 22334455544 899999999999999999999964443223333333221 355688999999999788
Q ss_pred ceeeeeccccccccCCcchhHHHHHHH---hhccCCCcHHHHHHHHHhcC----cCChhHHHHHHHHHHHHHHHHHHHHh
Q 045431 285 RLGWTVIPKELLFSDGFPVAKDFNRIV---CTCFNGASNISQAGGLACLS----PEGFKAVHEVIGFYKENTDIIVETFN 357 (433)
Q Consensus 285 r~G~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~l~ 357 (433)
||+.++++++ +.+.... ......++++.|.. ...+. ..+...-++..+++++++.+++..|+
T Consensus 354 --Gyiagsk~li--------d~lrt~s~~~~yat~~sppvaqq~-~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~ 422 (519)
T KOG1357|consen 354 --GYIAGSKELI--------DYLRTPSPSALYATSLSPPVAQQI-LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQ 422 (519)
T ss_pred --ceecCcHHHH--------hhhccCCCceeecccCChHHHHHH-HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhh
Confidence 9999999886 3222111 11223345555553 33332 12224457778899999999999999
Q ss_pred hcCCeeecCCCccEEEEECC-CCChHHHHHHHHHcCCeEecCCCC-CCCCCCCeEEEeec--cChhHHHHHHHHHHHh
Q 045431 358 SLGFKVYGGKNAPYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSG-FGPGGEGFIRVSAF--GHRGNVLEACKRFKHL 431 (433)
Q Consensus 358 ~~g~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~-f~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~ 431 (433)
..|+.+.+....+.+-+-+- +.....+-++++++ ++.+..+.. ..+--...+|++.. .+.|+++.+++.+.+.
T Consensus 423 ~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 423 KMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred cCcEEEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 99999988777765444332 22334555566665 665544332 22333567888853 4789999999887654
No 345
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.54 E-value=1.8e-12 Score=129.91 Aligned_cols=296 Identities=15% Similarity=0.109 Sum_probs=161.5
Q ss_pred CCCCCH-HHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCccccccccc
Q 045431 103 AEQGEK-PLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAE 180 (433)
Q Consensus 103 ~~~g~~-~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 180 (433)
.+.|.. +..+.+|+.+ +++ ..-++++|++.++.+ +.+++.+||.|+++..||.+..+.+.+.|..+++.....
T Consensus 192 ~~~G~i~eAe~~aA~~f----gAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~ 266 (713)
T PRK15399 192 DHTGPHLEAEEYIARTF----GAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR 266 (713)
T ss_pred CCChHHHHHHHHHHHHh----CCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc
Confidence 344444 4444444443 543 567899999999886 788999999999999999999999999997555432221
Q ss_pred -ccceEEEeecCccCCccc-----CCCCCC---CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEE-EEeccccc-
Q 045431 181 -KYGKIEYMRCTAENGFFP-----DLSTVA---RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSII-VYDSAYAL- 249 (433)
Q Consensus 181 -~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~l-i~De~~~~- 249 (433)
.+.-+ -++.+ ..+.. .+++.+ ++++++|++|++ -|++++ +++|++.| |+.+ ++||+|..
T Consensus 267 n~~Gi~--g~I~~-~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah 336 (713)
T PRK15399 267 NALGIL--GGIPR-REFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPY 336 (713)
T ss_pred cccCCc--CCCCh-hhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhh
Confidence 00000 00000 00000 111222 346888889954 899999 55566655 5665 69999986
Q ss_pred cccCCCC--Cccccc-CCCCcceEEEecccccccccccce-eeeeccccccccCCcchhHHHHHHHhhccCCCcHH----
Q 045431 250 YISDDNP--RSIFEI-PGAKEVAIETSSFSKYAGFTGVRL-GWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNI---- 321 (433)
Q Consensus 250 ~~~~~~~--~~~~~~-~~~~~~vi~i~S~sK~~~~~G~r~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 321 (433)
+.|.+.. .+.... .+.+..++++-|.+|++ +++.- +++.+...+ + .++++.......++++..
T Consensus 337 ~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~v---d----~~~~n~a~~m~~STSPsY~LmA 407 (713)
T PRK15399 337 THFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKGEY---D----EETFNEAFMMHTSTSPSYPIVA 407 (713)
T ss_pred hhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecCCC---C----HHHHHHHHHHHcCCCcHHHHHH
Confidence 3344321 222222 12233456689999998 56654 566665442 1 234444333222222322
Q ss_pred HHHHHHHhcCc-CChhHHHHHHHHHHHHHHHHHHHHhhc-C------CeeecCC--------------------------
Q 045431 322 SQAGGLACLSP-EGFKAVHEVIGFYKENTDIIVETFNSL-G------FKVYGGK-------------------------- 367 (433)
Q Consensus 322 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~-g------~~~~~~~-------------------------- 367 (433)
+..++.+++.. .+ +++.+...+....+++.+.+. + +.+..++
T Consensus 408 SLD~a~~~m~~~~G----~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~ 483 (713)
T PRK15399 408 SVETAAAMLRGNPG----KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADH 483 (713)
T ss_pred HHHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCccccccccccccc
Confidence 33333444442 33 333444444444555555443 2 2222210
Q ss_pred ---CccEEEEECCC-----------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 368 ---NAPYVWVQFPG-----------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 368 ---~g~~~~~~~~~-----------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
.-.=+.+..++ .....+. ..|+++||.+.-.+.+. -.+-++.+.+.++++.+++.|.++
T Consensus 484 ~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~-~~L~e~gI~~E~~d~~~----vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 484 MFLDPVKVTILTPGMDEQGNMSEEGIPAALVA-KFLDERGIVVEKTGPYN----LLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred ccCCCceEEEEecCcccccccccCCCCHHHHH-HHHHHcCCEEEecCCCe----EEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00113444442 2333444 44577799996543321 123334566888899888888764
No 346
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.53 E-value=2.3e-12 Score=123.30 Aligned_cols=298 Identities=18% Similarity=0.176 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH-HHh-cCCCCEEEEeC
Q 045431 79 EVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL-QIV-FGSNVTMAVQD 156 (433)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l-~~l-~~~gd~Vl~~~ 156 (433)
.+..+++.+.+.. .....+ ..-..++.+++++|+ + ..+++.+++++.||.++ .++ +++||+|+++.
T Consensus 5 ~e~~~~v~~~l~s----~~~~~~--g~~~~~fE~~~a~~~----g--~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~ 72 (363)
T PF01041_consen 5 EEEIDAVLEVLRS----GWLSTY--GPYVEEFEKEFAEYF----G--VKYAVAVSSGTSALHLALRALGLGPGDEVIVPA 72 (363)
T ss_dssp HHHHHHHHHHHHH----TCCSSS--SHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEES
T ss_pred HHHHHHHHHHHHh----CCccCC--CHHHHHHHHHHHHHh----C--CCeEEEeCChhHHHHHHHHhcCCCcCceEecCC
Confidence 3445566666654 333333 235689999999997 4 56888888889999874 443 57999999999
Q ss_pred CCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcCCCCccccCCCHHHHHHHH
Q 045431 157 PSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCSPNNPTGAAATREQLTRLV 231 (433)
Q Consensus 157 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~ 231 (433)
.+|......+..+| +.+++++++++ .+..+++. .+++++|+++ +..|... ++.+|.
T Consensus 73 ~t~~~~~~ai~~~G------------~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~---h~~G~~~---d~~~i~ 133 (363)
T PF01041_consen 73 YTFPATASAILWAG------------AEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVV---HLFGNPA---DMDAIR 133 (363)
T ss_dssp SS-THHHHHHHHTT-------------EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE----GGGB------HHHHH
T ss_pred CcchHHHHHHHHhc------------cEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEe---cCCCCcc---cHHHHH
Confidence 99999999999999 58889998854 44444432 3688998875 4456654 489999
Q ss_pred HHHHHcCCEEEEeccccccc-cCCCCCcccccCCCCcceEEEecc--cccccccccceeeeeccccccccCCcchhHHHH
Q 045431 232 QFAKDNGSIIVYDSAYALYI-SDDNPRSIFEIPGAKEVAIETSSF--SKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN 308 (433)
Q Consensus 232 ~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~vi~i~S~--sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 308 (433)
++|+++|++||+|.+++... +.+ ..+-++ .+ +.+.|| +|.+. .| --|+++++++.+ .+++.
T Consensus 134 ~~~~~~~i~lIeD~a~a~g~~~~g--~~~G~~---gd--~~~fSf~~~K~i~-~g-eGG~v~~~~~~~-------~~~~~ 197 (363)
T PF01041_consen 134 AIARKHGIPLIEDAAQAFGARYKG--RPVGSF---GD--IAIFSFHPTKIIT-TG-EGGAVVTNDPEL-------AERAR 197 (363)
T ss_dssp HHHHHTT-EEEEE-TTTTT-EETT--EETTSS---SS--EEEEESSTTSSS--SS-S-EEEEESTHHH-------HHHHH
T ss_pred HHHHHcCCcEEEccccccCceeCC--EeccCC---CC--ceEecCCCCCCCc-CC-CCeeEEecHHHH-------HHHhh
Confidence 99999999999999999533 222 112222 22 667777 68885 33 248888887664 34444
Q ss_pred HHHhhc-----------------cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeec-CCCc
Q 045431 309 RIVCTC-----------------FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYG-GKNA 369 (433)
Q Consensus 309 ~~~~~~-----------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~g 369 (433)
.+.... ....+.+..+.+..-| +.++...++-+++.+.+.+.|.+. ++.... +...
T Consensus 198 ~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~ 272 (363)
T PF01041_consen 198 ALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGA 272 (363)
T ss_dssp HHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTT
T ss_pred hhhccCcCccccccccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence 333211 1123333333223222 335666667777888888889887 553432 1221
Q ss_pred ----c-EEEEECCCC---ChHHHHHHHHHcCCeEecCCCC--CC------C-----C--C-------CCeEEEee--ccC
Q 045431 370 ----P-YVWVQFPGR---SSWDVFSEILEKTHVVTTPGSG--FG------P-----G--G-------EGFIRVSA--FGH 417 (433)
Q Consensus 370 ----~-~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~--f~------~-----~--~-------~~~iRi~~--~~~ 417 (433)
+ .+.+.++.. ...++.+.|. +.||.+.+... +. . . - +..+.|-+ ..+
T Consensus 273 ~~~~~~~f~i~~~~~~~~~rd~l~~~L~-~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt 351 (363)
T PF01041_consen 273 ERSSYYRFPIRLPDEALADRDELVEALR-ARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLT 351 (363)
T ss_dssp EEBCESSEEEEETCCGCSTHHHHHHHHH-HTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSC
T ss_pred cccccccccccccccccchHHHHHHHHH-HCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCC
Confidence 1 244555532 4455665555 45999987652 10 0 0 0 12344443 337
Q ss_pred hhHHHHHHHHHH
Q 045431 418 RGNVLEACKRFK 429 (433)
Q Consensus 418 ~~~l~~~l~~l~ 429 (433)
+++++..++.|+
T Consensus 352 ~edv~~I~~~ir 363 (363)
T PF01041_consen 352 EEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhccC
Confidence 888888888774
No 347
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=6.2e-12 Score=116.47 Aligned_cols=214 Identities=18% Similarity=0.181 Sum_probs=139.7
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccc
Q 045431 105 QGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYG 183 (433)
Q Consensus 105 ~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 183 (433)
+-...|.+.+++.. ...+.++.+++..|+.. +..++.+|++|+....+|.+....++....+-. .
T Consensus 77 Pt~~~le~~iaal~------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~g--------i 142 (409)
T KOG0053|consen 77 PTRDVLESGIAALE------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFG--------G 142 (409)
T ss_pred CchHHHHHHHHHHh------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhC--------c
Confidence 45567777777764 33457888888877775 788999999999999999998777765553210 2
Q ss_pred eEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccC
Q 045431 184 KIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIP 263 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~ 263 (433)
....+..++..++....+ +++++|++-+|.||+..+.+ +++|.++|+++|+++|+|+.++...... |.+ +
T Consensus 143 e~~~vd~~~~~~~~~~i~--~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~~-pL~---l- 212 (409)
T KOG0053|consen 143 EGDFVDVDDLKKILKAIK--ENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQD-PLP---L- 212 (409)
T ss_pred eeeeechhhHHHHHHhhc--cCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccccC-hhh---c-
Confidence 455555443333322222 47999999999999999887 7888888889999999999998542211 222 2
Q ss_pred CCCcceEEEecccccccccc--cceeeeecc-ccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHH
Q 045431 264 GAKEVAIETSSFSKYAGFTG--VRLGWTVIP-KELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHE 340 (433)
Q Consensus 264 ~~~~~vi~i~S~sK~~~~~G--~r~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 340 (433)
+-.|++.|.+|.+| +. +=.|.++.+ .++ ..++...+....+..+++...-.. .+.+.+.-
T Consensus 213 ---GADIV~hSaTKyi~-Ghsdvi~G~iv~n~~~~--------~~~l~~~~~~lg~~~~p~~~~ll~-----Rglktl~l 275 (409)
T KOG0053|consen 213 ---GADIVVHSATKYIG-GHSDVIGGSVVLNSEEL--------ASRLKFLQEDLGWCEDPFDLFLLS-----RGLKTLHL 275 (409)
T ss_pred ---CCCEEEEeeeeeec-CCcceeeeEEecCcHHH--------HHHHHHHHHHhcCCCCHHHHHHHh-----cCcchhhh
Confidence 12399999999997 32 224666665 333 356666665555555555433222 33333444
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 045431 341 VIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 341 ~~~~~~~~~~~l~~~l~~~ 359 (433)
+.++-.++...+.+.|+..
T Consensus 276 Ri~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 276 RINKHSENALKIALLLEAH 294 (409)
T ss_pred hHHHHHHHHHHHHHHhhhC
Confidence 4455556655566666654
No 348
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.53 E-value=1.8e-12 Score=122.61 Aligned_cols=292 Identities=15% Similarity=0.151 Sum_probs=174.3
Q ss_pred CCHHHHHHHHHHHhccCCCCCC--cEEEcCChHHHHHH-HHHhc-CCCCEEEEeCCCChhh-h-hhHHHhCCcccccccc
Q 045431 106 GEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISR-LQIVF-GSNVTMAVQDPSYPAY-V-DSSVIMGQTGEFQKDA 179 (433)
Q Consensus 106 g~~~lr~~la~~l~~~~~~~~~--~i~~~~G~~~al~~-l~~l~-~~gd~Vl~~~p~~~~~-~-~~~~~~g~~~~~~~~~ 179 (433)
...++-+.+.+.|.+-++.+.+ -++++.|++.++++ +..++ ++|++|++.. .|..- . ++++..|..
T Consensus 36 ~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~------- 107 (374)
T TIGR01365 36 LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLP------- 107 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCC-------
Confidence 4455555555555554455322 36678999999997 68888 5899998865 44332 3 566667731
Q ss_pred cccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc
Q 045431 180 EKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI 259 (433)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~ 259 (433)
++..+..+.... .+++.....+.|++++....||+..+. ++++..+ ++.++|+|.+-+.. +.+..+
T Consensus 108 ----~v~~l~~~~g~~--~~~~~ve~~~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVDavSs~g---~~~l~~ 173 (374)
T TIGR01365 108 ----DVRVLEAEYGKL--PDLKKVDFKNDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICDATSAAF---AQDLDY 173 (374)
T ss_pred ----CcEEEcCCCCCC--CCHHHcCCCCCEEEecCCCchheeccc---ccccccc--CCCcEEEEccchhc---CCCCCh
Confidence 234443332222 222221111336777888899999884 4444221 58999999987732 223333
Q ss_pred cccCCCCcceEEEecccccccccccceeeeeccccccccCCc--c---hhHHHH---------HHH-hhccCCCcHHHHH
Q 045431 260 FEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGF--P---VAKDFN---------RIV-CTCFNGASNISQA 324 (433)
Q Consensus 260 ~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~--~---~~~~~~---------~~~-~~~~~~~~~~~q~ 324 (433)
.. ..+++.|..|.+++|+ .++++++++..+.+... . ....+. ... ..+.++++.....
T Consensus 174 d~------iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~ 246 (374)
T TIGR01365 174 HK------LDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVE 246 (374)
T ss_pred hH------CcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHH
Confidence 22 2377888899998554 47889999888633110 0 001000 011 2233444555555
Q ss_pred HHHHhcCcCChh-HHHHHHHHHHHHHHHHHHHHhhcC-CeeecC----CCccEEEEECCC--C-----C-----hHHHHH
Q 045431 325 GGLACLSPEGFK-AVHEVIGFYKENTDIIVETFNSLG-FKVYGG----KNAPYVWVQFPG--R-----S-----SWDVFS 386 (433)
Q Consensus 325 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~----~~g~~~~~~~~~--~-----~-----~~~~~~ 386 (433)
++..+++....+ .++.+.++++++++.+++.++++| +.+... .+.....+.++. . + ..++..
T Consensus 247 a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~ 326 (374)
T TIGR01365 247 DWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELIS 326 (374)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHH
Confidence 555555411111 368999999999999999999998 666542 122345556642 2 1 344444
Q ss_pred HHHHcCCeEecCCCCCCCCCCCeEEEee-c-cChhHHHHHHHHHH
Q 045431 387 EILEKTHVVTTPGSGFGPGGEGFIRVSA-F-GHRGNVLEACKRFK 429 (433)
Q Consensus 387 ~l~~~~gi~v~~g~~f~~~~~~~iRi~~-~-~~~~~l~~~l~~l~ 429 (433)
. ++++||.+.+|.. ......|||+. . .+.++++.+++.|.
T Consensus 327 ~-l~~~gi~i~~G~~--~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 327 T-LEKEGVAYDIGSY--RDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred H-HHHCCEEEecccc--ccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 4 4556999988764 23347899994 3 48999999999884
No 349
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=1.4e-12 Score=117.71 Aligned_cols=339 Identities=14% Similarity=0.119 Sum_probs=215.9
Q ss_pred CCCceEEecCCCC-CCCChHHHHHHHHHHHhhcc--cCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHH
Q 045431 61 PDAEVISLGIGDT-TEPIPEVITSALAKRSYALS--TQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKC 137 (433)
Q Consensus 61 ~~~~~i~l~~g~~-~~~~~~~~~~a~~~~~~~~~--~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~ 137 (433)
++.+++||++.+. .+...+++.+.....+.+++ +.....-|+...-..+|.+.||+|+ | .++.|+...|-+.
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G-~E~aivYs~gF~t 166 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----G-TEDAIVYSYGFST 166 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----C-Ccceeeeccccch
Confidence 3567888887775 46677888888888888763 2222335888888899999999998 6 4578999999888
Q ss_pred HHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCccc---CCC----CCC---Ccc
Q 045431 138 DISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP---DLS----TVA---RTD 207 (433)
Q Consensus 138 al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~---~~~ 207 (433)
.-+.+.++++.||.|.+.+-...+....++..- -.+..+..++..+... +.+ +.+ .++
T Consensus 167 i~S~ipafsKrGDIi~~de~~nfaIq~GlqlSR------------S~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~R 234 (467)
T KOG1358|consen 167 IESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSR------------STISYFKHNDMEDLERLLPEQEDEDQKNPKKALTR 234 (467)
T ss_pred hhhcchhhhccCcEEEEehhhhHHHHHHHhhhh------------heeEEecCCCHHHHHHhccCcchhhhhccccccce
Confidence 888899999999999998888777666555544 2455665544333211 111 111 233
Q ss_pred EEEEc-CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCC--CCcceEEEeccccccccccc
Q 045431 208 IIFFC-SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPG--AKEVAIETSSFSKYAGFTGV 284 (433)
Q Consensus 208 ~i~l~-~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~vi~i~S~sK~~~~~G~ 284 (433)
-.++. ----+||...+ +.+|+++..||...||.||.|+....+.....+.+-.+ ..+..++++|++-+++..|
T Consensus 235 rfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G- 310 (467)
T KOG1358|consen 235 RFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG- 310 (467)
T ss_pred EEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC-
Confidence 33333 33345899888 88999999999999999999985443322222222111 2345588999999998666
Q ss_pred ceeeeeccccccccCCcchhHHHHHH-HhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCe
Q 045431 285 RLGWTVIPKELLFSDGFPVAKDFNRI-VCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFK 362 (433)
Q Consensus 285 r~G~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 362 (433)
||++++.-++.+ +++... ...+.. .++....++..++.... +-..+.+.++.+...+.+.|... ++.
T Consensus 311 --gFc~G~~~i~~h------QrLSg~~Y~fSAs-lPp~la~aa~~ai~i~~--~~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 311 --GFCAGKSFIADH------QRLSGSGYCFSAS-LPPYLAGAAIKAILIEE--WNPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred --ceeecceeeEee------eeccccceeeecc-CchhhhhhHHHHHHHHh--hCcchhhhhhccccccchhhhcCCceE
Confidence 888885544311 222211 111112 23333333444443221 22445667777777888888876 788
Q ss_pred eecCCCccEEEEECCC-----CCh----HHHHHHHHHcCCeEecCCCCCC----CCCCCeEEEeec--cChhHHHHHHHH
Q 045431 363 VYGGKNAPYVWVQFPG-----RSS----WDVFSEILEKTHVVTTPGSGFG----PGGEGFIRVSAF--GHRGNVLEACKR 427 (433)
Q Consensus 363 ~~~~~~g~~~~~~~~~-----~~~----~~~~~~l~~~~gi~v~~g~~f~----~~~~~~iRi~~~--~~~~~l~~~l~~ 427 (433)
+....-.+.+.+.+.. ... .+++..++.+ |+.+....... ..-+-.+||++. .++++++++.+.
T Consensus 380 v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ 458 (467)
T KOG1358|consen 380 VSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL 458 (467)
T ss_pred EecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence 8777677777777763 222 2345555656 77775432211 011335999974 489999999999
Q ss_pred HHHhh
Q 045431 428 FKHLY 432 (433)
Q Consensus 428 l~~~l 432 (433)
|++..
T Consensus 459 ik~~~ 463 (467)
T KOG1358|consen 459 IKEVA 463 (467)
T ss_pred HHHHH
Confidence 98753
No 350
>PLN02880 tyrosine decarboxylase
Probab=99.52 E-value=5.8e-12 Score=124.06 Aligned_cols=310 Identities=12% Similarity=0.051 Sum_probs=187.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCCC-------cEEEcCChHHHHH-HH---HH-hcC-------CCCEEEEeCCC
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEEG-------DIFVSDGAKCDIS-RL---QI-VFG-------SNVTMAVQDPS 158 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~-------~i~~~~G~~~al~-~l---~~-l~~-------~gd~Vl~~~p~ 158 (433)
...|...+...++.+.+.+|+.+.++.+.+ .-++|+|++++.. .+ +. .++ +.-.|++.+-+
T Consensus 111 ~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a 190 (490)
T PLN02880 111 GFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT 190 (490)
T ss_pred CcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc
Confidence 345555668899999999999986666543 3567788777643 33 11 221 12245567788
Q ss_pred ChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C-------CC-CccEEEEcCCCCccccCCCHHHH
Q 045431 159 YPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T-------VA-RTDIIFFCSPNNPTGAAATREQL 227 (433)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~-~~~~i~l~~p~nPtG~~~~~~~~ 227 (433)
|.++..++..+|... -.++.+|.+.+++...+++ + .. .+-+|+-+-...+||.+-| +
T Consensus 191 H~Sv~Kaa~~lGlg~---------~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l 258 (490)
T PLN02880 191 HSALQKACQIAGIHP---------ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---L 258 (490)
T ss_pred hHHHHHHHHHcCCCH---------HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---H
Confidence 999999999999521 1477788875333333322 1 11 2344455566888999877 8
Q ss_pred HHHHHHHHHcCCEEEEeccccccccCC-CC-CcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhH
Q 045431 228 TRLVQFAKDNGSIIVYDSAYALYISDD-NP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAK 305 (433)
Q Consensus 228 ~~i~~~a~~~~~~li~De~~~~~~~~~-~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~ 305 (433)
++|.++|++||+++.+|.+|+.+.... .. ..+..+ ..-.-+..+++|++. ....+|++++++.... ..
T Consensus 259 ~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gi---e~aDSit~d~HKwl~-~P~~~g~llvr~~~~l------~~ 328 (490)
T PLN02880 259 LELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGV---EEADSFNMNAHKWFL-TNFDCSLLWVKDRNAL------IQ 328 (490)
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCc---hhcCEEEECchhhcC-CCccEEEEEEeCHHHH------HH
Confidence 889999999999999999999754321 11 112222 112266778999995 8888999888753210 00
Q ss_pred HHHH---HHhh-----------ccC---CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCC
Q 045431 306 DFNR---IVCT-----------CFN---GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGK 367 (433)
Q Consensus 306 ~~~~---~~~~-----------~~~---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~ 367 (433)
.+.. +... ... .............++..+.+.+++...+.-+.++++.+.+++. ++++..+.
T Consensus 329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~ 408 (490)
T PLN02880 329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR 408 (490)
T ss_pred HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 0000 0000 000 0011111112222444455555666666668888899999876 88887765
Q ss_pred CccEEEEECCCC--C-------hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc---ChhHHHHHHHHHHHhh
Q 045431 368 NAPYVWVQFPGR--S-------SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG---HRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 ~g~~~~~~~~~~--~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~~~l~~~l~~l~~~l 432 (433)
....+.+++++. + ..++.+++.++..+.+.+.. + .+..++|+++.+ ++++++.+++.|.++.
T Consensus 409 ~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~-~--~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~ 482 (490)
T PLN02880 409 IFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTV-L--SGKYVLRFAVGAPLTEERHVTAAWKVLQDEA 482 (490)
T ss_pred ceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEE-E--CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 655667777531 1 13455566655566664432 2 346789999633 5799999999997753
No 351
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.51 E-value=2.9e-11 Score=113.23 Aligned_cols=331 Identities=15% Similarity=0.134 Sum_probs=196.6
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhccc-CCCCCCCCC-CCCCHHHHHHHHHHHhccCCCCC-CcEE-EcCChHHHHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALST-QEGYSGYGA-EQGEKPLRAAIASTFYKDLGIEE-GDIF-VSDGAKCDIS 140 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~Y~~-~~g~~~lr~~la~~l~~~~~~~~-~~i~-~~~G~~~al~ 140 (433)
.++|+.|. -..|++|++++++.+.+... ..++...++ ..-..++-+.+.+.|.+-++++. .+|+ +..|++.++.
T Consensus 5 ~~nF~aGP--a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e 82 (364)
T PRK12462 5 QLNFSGGP--GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS 82 (364)
T ss_pred cceecCCC--cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence 56777774 35789999999988866432 011222211 22334444444444444556632 3565 5555888999
Q ss_pred H-HHHhcCCCCEEE-EeCCCChhhh--hhHHHhCCcccccccccccceEEEeecCccCCcccC---CCCCCCccEEEEcC
Q 045431 141 R-LQIVFGSNVTMA-VQDPSYPAYV--DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD---LSTVARTDIIFFCS 213 (433)
Q Consensus 141 ~-l~~l~~~gd~Vl-~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~l~~ 213 (433)
+ ...++.+||+++ +..-++++-. ..++.+|. ..+.......+.+-.++ ++..++.+.|++|+
T Consensus 83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g~-----------v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~ 151 (364)
T PRK12462 83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAA-----------MRVVWDGAASGYRTLPSLAELDWDARAPFRHYVS 151 (364)
T ss_pred HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcCC-----------ceEecCcCCCCCCcCCCHHHhccCCCCcEEEEcc
Confidence 7 588999999766 5555655532 33333341 12221111111111211 22224677888888
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
....||+.++ ++.+.++.++|+|.+-+.+ +.|..+..+ | +++.|..|.+|.|| ++.+++++
T Consensus 152 NETstGv~~~--------~~~~~~~~llvvD~sS~~~---s~pid~~~~----d--vi~agsQKnlgP~G--ltvvivs~ 212 (364)
T PRK12462 152 NETVEGLQFP--------DAAGLPDSPLIADMSSDFM---SRPFDVEAY----G--MVYAHAQKNLGPAG--VTVAIIRR 212 (364)
T ss_pred CCCCceEecC--------cccccCCCeEEEEcCchhh---CCCCChHHc----c--EEEeeccccCCCCc--eEEEEECH
Confidence 8889999886 2222368999999987732 224444333 2 66667799999778 68899998
Q ss_pred cccccCC---cchhHHHHHHH--hhccCCCcHHHHHHHHHhcCcCChh--HHHHHHHHHHHHHHHHHHHHhhcC-Ceeec
Q 045431 294 ELLFSDG---FPVAKDFNRIV--CTCFNGASNISQAGGLACLSPEGFK--AVHEVIGFYKENTDIIVETFNSLG-FKVYG 365 (433)
Q Consensus 294 ~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~ 365 (433)
+.+.+.. +.+.+ +.... ....++++.....++...++-...+ .++.+.++-+++++.+++.+++.. +....
T Consensus 213 ~al~~~~~~~p~~ld-y~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~ 291 (364)
T PRK12462 213 ALLERVPDTLPPMLD-FRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCH 291 (364)
T ss_pred HHHhhccccCCchhh-HHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 8874321 11111 22211 1233455666665555544321112 468888899999999999999873 44321
Q ss_pred ----CCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHHHhh
Q 045431 366 ----GKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFKHLY 432 (433)
Q Consensus 366 ----~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~~~l 432 (433)
..+-+.+.++++.....+.+.+.++++|+.-.-|.. .-+.+|+|+|+ +.+.++.+++-|+++-
T Consensus 292 ~~~~~RS~mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr----~vgg~Ras~yna~~~e~v~~L~~fm~~f~ 360 (364)
T PRK12462 292 AHRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHR----SIGGIRASLYNAVSEQAVSRLCAFLKDFA 360 (364)
T ss_pred CChhhcCcceEEEEcCCHHHHHHHHHHHHHCCCccccCCc----ccCceEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 234566778877444344444555667998877653 23569999765 8899999998888753
No 352
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.51 E-value=6.4e-12 Score=121.87 Aligned_cols=312 Identities=14% Similarity=0.113 Sum_probs=171.4
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCC---CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEE
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYG---AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTM 152 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~---~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~V 152 (433)
+.|+.+.+++.+.+..+.+.. ..+. ...-...+++.+++++ +++ ..++++++++++.++...+.+||+|
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~--~~l~~g~~g~r~~~le~~lA~l~----gae--~alvv~sg~aAi~l~l~~l~~GdeV 163 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLE--YDLETGKRGSRYSHVEGLLCELT----GAE--DALVVNNNAAAVLLALNTLAKGKEV 163 (454)
T ss_pred CCCHHHHHHHHHHHhcccchh--ccccccccchHHHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHhCCcCEE
Confidence 468999999999887643211 0111 0112368888888886 654 2445666777787655668999999
Q ss_pred EEeCCCChhh------hhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCCCcc--cc--
Q 045431 153 AVQDPSYPAY------VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNNPT--GA-- 220 (433)
Q Consensus 153 l~~~p~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~nPt--G~-- 220 (433)
++.+..|..+ ....+..| .+++.++.+.... ..++++ .+++++|++.+++||+ |.
T Consensus 164 Ivs~~e~v~~ggs~~i~~~~~~~G------------~~~~~v~~~~~~~-l~dle~aI~~~T~lv~~~h~sN~~~~G~~~ 230 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIPDVMEQSG------------AKLVEVGTTNRTH-LKDYEDAITENTALLLKVHTSNYRIVGFTE 230 (454)
T ss_pred EECCChhhhhcchhhHHHHHHHcC------------CEEEEeCCCCCCC-HHHHHHhcCcCCEEEEEEccCcccccCCCC
Confidence 9998775322 22334445 3666666532211 122222 4689999999999995 63
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCC-----CCCcccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 221 AATREQLTRLVQFAKDNGSIIVYDSAYALYISDD-----NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 221 ~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~-----~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
..+ +++|+++|++||+++++|...+.+...+ ..+.+..... .+..+++.|.+|++|-| ..|++++++++
T Consensus 231 ~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~-~GaDiv~fSg~K~LgGp--~~G~i~g~~~~ 304 (454)
T TIGR00474 231 EVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIA-AGVDLVTFSGDKLLGGP--QAGIIVGKKEL 304 (454)
T ss_pred CCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhH-cCCCEEEecCccccCCC--eEEEEEECHHH
Confidence 555 8899999999999999998643221100 0011111111 12348899999998533 48999999877
Q ss_pred cccCCcchhHHHHHHHhhccCCCcHHHH---HHHH-HhcC-------cCChhHHHHHHHHHHHHHHHHHHHHhhc---CC
Q 045431 296 LFSDGFPVAKDFNRIVCTCFNGASNISQ---AGGL-ACLS-------PEGFKAVHEVIGFYKENTDIIVETFNSL---GF 361 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q---~~~~-~~l~-------~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g~ 361 (433)
+ +.+................ .+++ .++. ..+.+.+....++.+++...+.+.|++. ++
T Consensus 305 i--------~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~ 376 (454)
T TIGR00474 305 I--------ERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGF 376 (454)
T ss_pred H--------HhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCc
Confidence 5 2211100000000111111 1111 1111 1112333444456667777788888663 22
Q ss_pred --eeecCC----C---------ccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee-ccChhHHHHHH
Q 045431 362 --KVYGGK----N---------APYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA-FGHRGNVLEAC 425 (433)
Q Consensus 362 --~~~~~~----~---------g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~-~~~~~~l~~~l 425 (433)
++.... + +..+.++..+....++.. .+++....+.. ...++.+.+.+ +..++|++..+
T Consensus 377 ~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~-~lr~~~~~ii~-----r~~~~~~~ld~r~~~~~~~~~~~ 450 (454)
T TIGR00474 377 ELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEA-RLRELPPPIIG-----RIEDDRFLLDLRTLLEDEEELLI 450 (454)
T ss_pred eEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHH-HHhcCCCCEEE-----EEECCEEEEEeCcCCHHHHHHHH
Confidence 333221 1 112333333444455544 45554533321 12356777776 34788888887
Q ss_pred HHH
Q 045431 426 KRF 428 (433)
Q Consensus 426 ~~l 428 (433)
++|
T Consensus 451 ~~~ 453 (454)
T TIGR00474 451 EAL 453 (454)
T ss_pred HHh
Confidence 765
No 353
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.51 E-value=3.1e-11 Score=117.76 Aligned_cols=351 Identities=10% Similarity=0.058 Sum_probs=183.8
Q ss_pred HHHHHHHhcC-CCCceEEecCCCCC--C-CChHHHH--HHHHHHHhhccc-CCCCCCCCCCCCCHHHHHHHHHHHhccC-
Q 045431 51 RRKAAHMLKY-PDAEVISLGIGDTT--E-PIPEVIT--SALAKRSYALST-QEGYSGYGAEQGEKPLRAAIASTFYKDL- 122 (433)
Q Consensus 51 ~~~~~~~~~~-~~~~~i~l~~g~~~--~-~~~~~~~--~a~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~la~~l~~~~- 122 (433)
+..+...... +++..||+..|... + ..+|.+. +++.+++.+... ......+ ..++ ...+++.+.+..
T Consensus 25 ~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~----~~~~-~~~l~~~l~~~~~ 99 (431)
T TIGR03251 25 RSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDV----YTVA-MARFVDTFARVLG 99 (431)
T ss_pred eccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCC----CCHH-HHHHHHHHHHhcC
Confidence 3444444553 67788998766432 2 3567887 888888875310 0011111 1222 233443333211
Q ss_pred CCCCCcEEEcCChHHHHHHHHHhc----C-----------CCCEEEEeCCCChhhhhhHHHh-CCccccccccccc----
Q 045431 123 GIEEGDIFVSDGAKCDISRLQIVF----G-----------SNVTMAVQDPSYPAYVDSSVIM-GQTGEFQKDAEKY---- 182 (433)
Q Consensus 123 ~~~~~~i~~~~G~~~al~~l~~l~----~-----------~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~---- 182 (433)
.-..+.+++++++++|+.....+. . .+.+|+..+-+|++........ |.......+....
T Consensus 100 ~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 179 (431)
T TIGR03251 100 DPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPR 179 (431)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCcc
Confidence 113468999999999988532221 1 1367999998898865444333 2111100000000
Q ss_pred ceEE--EeecCccC-C-c----ccCC-------CC-CCCccEEEEcCC-CCccccC-CCHHHHHHHHHHHHHcCCEEEEe
Q 045431 183 GKIE--YMRCTAEN-G-F----FPDL-------ST-VARTDIIFFCSP-NNPTGAA-ATREQLTRLVQFAKDNGSIIVYD 244 (433)
Q Consensus 183 ~~~~--~~~~~~~~-~-~----~~~~-------~~-~~~~~~i~l~~p-~nPtG~~-~~~~~~~~i~~~a~~~~~~li~D 244 (433)
.... ..+.+.+. . . ..++ +. ..++.++++ .| +.-.|.. .+++.+++|.++|++||+++|.|
T Consensus 180 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAaviv-EPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 258 (431)
T TIGR03251 180 IDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIA-EPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFD 258 (431)
T ss_pred CCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEE-eccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 0000 01111000 0 0 0001 11 245666555 45 5556754 57889999999999999999999
Q ss_pred ccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhH-HHH-HHHhhccCCCcHHH
Q 045431 245 SAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAK-DFN-RIVCTCFNGASNIS 322 (433)
Q Consensus 245 e~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ 322 (433)
|++.++...|.......++-.+| ++ +++|.+. . .|++.. +++.. +.. .+. .....++.+.++++
T Consensus 259 EV~tG~GrtG~~~a~~~~gv~PD-i~---~~gK~~~-~---~g~~~~-~~i~~-----~~~~~~~~~~~~~~T~~gnpl~ 324 (431)
T TIGR03251 259 EVQTGVGLTGTAWAYQQLGVQPD-IV---AFGKKTQ-V---CGIMAG-RRVDE-----VADNVFAVPSRLNSTWGGNLVD 324 (431)
T ss_pred cchhccCccchHHHHHhcCCCCC-EE---EecccCc-c---ceEEec-chHHH-----hhhhcccCccccCCCCCCCHHH
Confidence 99998765544322222322344 23 4788762 2 255543 33210 000 000 01133445577888
Q ss_pred HHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh----cC-CeeecCCCccEEEEECCCCCh-HHHHHHHHHcCCeEe
Q 045431 323 QAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS----LG-FKVYGGKNAPYVWVQFPGRSS-WDVFSEILEKTHVVT 396 (433)
Q Consensus 323 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g-~~~~~~~~g~~~~~~~~~~~~-~~~~~~l~~~~gi~v 396 (433)
.+++.+.|+.... +...++.+++-+++.+.|++ +. +.......|.++.+.++.... ..+...++ ++||.+
T Consensus 325 ~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~-~~Gvl~ 400 (431)
T TIGR03251 325 MVRATRILEIIEE---ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLY-REGVLL 400 (431)
T ss_pred HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHH-hCCeEE
Confidence 8888887763211 12223334444444444433 32 221111246777777764322 34555555 559999
Q ss_pred cCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHh
Q 045431 397 TPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 397 ~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~ 431 (433)
.|.. .+.+||+ ++.+++|+++++++|.++
T Consensus 401 ~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 401 LGCG------ERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred ecCC------CCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 7642 3568887 577999999999999763
No 354
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.48 E-value=2.7e-12 Score=125.14 Aligned_cols=343 Identities=14% Similarity=0.091 Sum_probs=175.9
Q ss_pred HHHHHHhcCCCCceEEecCCCC--CC-CChHHHHHHHHHHHhhcccCCCCCCCC-CCCCCHHHHHHHHHHHhccCCCCCC
Q 045431 52 RKAAHMLKYPDAEVISLGIGDT--TE-PIPEVITSALAKRSYALSTQEGYSGYG-AEQGEKPLRAAIASTFYKDLGIEEG 127 (433)
Q Consensus 52 ~~~~~~~~~~~~~~i~l~~g~~--~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~la~~l~~~~~~~~~ 127 (433)
..+......+++..||+..|.. .+ ..+|.+.+++.+++.+.. .++ +.....+|-+.|++.+ + ..+
T Consensus 37 ~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~------~~~~~~~~~~~la~~l~~~~----p-~~~ 105 (431)
T PRK06209 37 GSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC------NFTRPSAIELDAAESFLELI----D-GAD 105 (431)
T ss_pred ccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc------CCCCCCHHHHHHHHHHHHhC----C-ccc
Confidence 3444445566788999976642 22 367899999999987532 121 1111123444444432 2 236
Q ss_pred cEEEcCChHHHHHHHHHh---cCCCCEEEEe-CCCChhhhhhHHHhCCccccc-ccccccceEEEeecCccCCcccCCCC
Q 045431 128 DIFVSDGAKCDISRLQIV---FGSNVTMAVQ-DPSYPAYVDSSVIMGQTGEFQ-KDAEKYGKIEYMRCTAENGFFPDLST 202 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l---~~~gd~Vl~~-~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (433)
.+++++++++|......+ .....+|+.. .-+|.+..... .|...... ...........++.++-..+...++.
T Consensus 106 ~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 183 (431)
T PRK06209 106 MVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWF--IGTTPMSAGIPASVSALTVTFRYNDIASLEALFED 183 (431)
T ss_pred eEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccc--cccCCCCCCCChhHhccccccCCCCHHHHHHHHHh
Confidence 899999999998863222 2223455544 23333211111 01000000 00000001122222211111111111
Q ss_pred C-CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccc-cCCCCcceEEEeccccccc
Q 045431 203 V-ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFE-IPGAKEVAIETSSFSKYAG 280 (433)
Q Consensus 203 ~-~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~vi~i~S~sK~~~ 280 (433)
. .++.+ +++.|- .|...+.+.+++|.++|++||+++|+||++..+...+ ....+ +.-.+| +.+++|.+|
T Consensus 184 ~~~~~aa-vi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~--~g~~~~~gv~PD----i~t~gK~lg 254 (431)
T PRK06209 184 HPGRIAC-VILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHM--RGAQKLYGIVPD----LSCFGKALG 254 (431)
T ss_pred CCCCEEE-EEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc--chhhHHhCCCcc----eeeehhhhc
Confidence 1 23444 445563 3557788999999999999999999999997663321 11111 221233 367899998
Q ss_pred ccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhh--
Q 045431 281 FTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNS-- 358 (433)
Q Consensus 281 ~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 358 (433)
.|+.+|+++++++++..........-..+...++.++++++.+++.+.|+.... +.+.++++++.+++.+.|++
T Consensus 255 -gG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~---~~~~~~~~~~g~~l~~~L~~~~ 330 (431)
T PRK06209 255 -NGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD---EDVIERLHEQGAKLAAGVNEAA 330 (431)
T ss_pred -CCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence 889999999988775110000000000011234445566777777766652211 12344444555555555443
Q ss_pred --cCCee-ecCCCccEEEEEC--C--CCChH----HHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHH
Q 045431 359 --LGFKV-YGGKNAPYVWVQF--P--GRSSW----DVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKR 427 (433)
Q Consensus 359 --~g~~~-~~~~~g~~~~~~~--~--~~~~~----~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~ 427 (433)
+++.. +...+.+....-+ . +.... .+...+++ .||.+.| ++|+...+++++++++++
T Consensus 331 ~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~-----------l~is~~ht~~dId~~l~~ 398 (431)
T PRK06209 331 AEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS-----------LVVSYAHGDADIERTIDA 398 (431)
T ss_pred HhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc-----------ccccccCCHHHHHHHHHH
Confidence 44432 1112322222211 1 11111 34455544 5997622 567777799999999999
Q ss_pred HHHhh
Q 045431 428 FKHLY 432 (433)
Q Consensus 428 l~~~l 432 (433)
|.+++
T Consensus 399 l~~~l 403 (431)
T PRK06209 399 VHGAL 403 (431)
T ss_pred HHHHH
Confidence 98876
No 355
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=1.9e-11 Score=111.42 Aligned_cols=298 Identities=13% Similarity=0.109 Sum_probs=172.3
Q ss_pred cCCCCceEEecCCCCC---CCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 59 KYPDAEVISLGIGDTT---EPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 59 ~~~~~~~i~l~~g~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
+.++.+.||+..+.-. -+..|++.+++.+.+.+.. .....|.... .-+|.+.+.+.+.+ -.++.|++.+++
T Consensus 52 D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~--hs~~~~~t~e-av~l~~~l~~~~~~---~~~~rvff~nsG 125 (433)
T KOG1401|consen 52 DPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLG--HSSNGYFTLE-AVELEEVLSAVLGK---GSAERVFFCNSG 125 (433)
T ss_pred cCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhhe--eccCccccHH-HHHHHHHHHhcccC---CCccEEEEecCC
Confidence 3456678998766521 2357999999999988764 2233332211 33444444443321 167899999999
Q ss_pred HHHHHH-H---HHhcCCC---C--EEEEeCCCChhhh-hhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-CC
Q 045431 136 KCDISR-L---QIVFGSN---V--TMAVQDPSYPAYV-DSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-VA 204 (433)
Q Consensus 136 ~~al~~-l---~~l~~~g---d--~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (433)
++|... | +.....+ + .|+..+.+|++-. .++...+....-.++......++....++...+..-++. ..
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 999875 4 2222222 2 3788888887643 333333321110111110111122221110000000111 12
Q ss_pred CccEEEEcCC-CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccc
Q 045431 205 RTDIIFFCSP-NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT 282 (433)
Q Consensus 205 ~~~~i~l~~p-~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~ 282 (433)
.+.++++ .| +.-.|..+ +++.+..|.+.|+++|+++|.||++.+|...+.......+...+| |.++.|.++ .
T Consensus 206 ~IaAVIv-EPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD----I~t~aK~L~-g 279 (433)
T KOG1401|consen 206 EIAAVIV-EPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD----ITTVAKPLG-G 279 (433)
T ss_pred ceEEEEE-ecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc----ceeehhhcc-C
Confidence 4555554 66 66667554 788899999999999999999999998776654221111222344 457899998 9
Q ss_pred ccceeeeeccccccccCCcchhHHHHH---HHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhh
Q 045431 283 GVRLGWTVIPKELLFSDGFPVAKDFNR---IVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNS 358 (433)
Q Consensus 283 G~r~G~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~ 358 (433)
|+.+|...+++.+. +.+.. +.+.++.+.++++..++...++.... ++++++.+.-+..++.+.+.+.+
T Consensus 280 GlPigA~~v~~kV~--------~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 280 GLPIGATGVRDKVA--------EMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred CceeEEEeehHHHH--------hhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999998884 33221 34466677889998888888774433 45666666666666777777765
Q ss_pred cCCeeec-CCCccEEEEEC
Q 045431 359 LGFKVYG-GKNAPYVWVQF 376 (433)
Q Consensus 359 ~g~~~~~-~~~g~~~~~~~ 376 (433)
..-.... -..++++.+.+
T Consensus 352 ~~~~i~g~~grgl~ig~~~ 370 (433)
T KOG1401|consen 352 TPNSICGGVGRGLVIGFEF 370 (433)
T ss_pred CCCceeeeeeeEEEEEEEE
Confidence 4222211 23455555444
No 356
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.45 E-value=6.1e-14 Score=128.19 Aligned_cols=256 Identities=15% Similarity=0.165 Sum_probs=153.5
Q ss_pred ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEe
Q 045431 77 IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQ 155 (433)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~ 155 (433)
+.+.+++++.++.. +...|+.+....+|++.+++.+ +.+ ..+++.+++.+..+ +..+++|++.|++.
T Consensus 7 ~~~~m~~a~~~a~~------gd~~Yg~D~~~~~l~~~i~~l~----g~e--~a~f~~sGT~An~~al~~~~~~~~~vi~~ 74 (290)
T PF01212_consen 7 PTPAMLEAMAAANV------GDDAYGEDPTTARLEERIAELF----GKE--AALFVPSGTMANQLALRAHLRPGESVICA 74 (290)
T ss_dssp S-HHEEHHHHHTTS------B-CCTTSSHHHHHHHHHHHHHH----TSS--EEEEESSHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHcccc------CCcccCCChhHHHHHHHHHHHc----CCC--EEEEeCCCChHHHHHHHHHHhcCCceecc
Confidence 56777788854432 2236988888999999999987 543 34566666666655 78888999999999
Q ss_pred CCCChhhhhhH---HHhCCcccccccccccceEEEeecCccCCcccC-CCC--------CCCccEEEEcCCCCcc-ccCC
Q 045431 156 DPSYPAYVDSS---VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--------VARTDIIFFCSPNNPT-GAAA 222 (433)
Q Consensus 156 ~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~i~l~~p~nPt-G~~~ 222 (433)
+++|....+.- ...| .+++.++.+.++.+.++ ++. ..++++|+|++|+|.. |+++
T Consensus 75 ~~aHi~~~E~ga~~~~~G------------~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~ 142 (290)
T PF01212_consen 75 DTAHIHFDETGAIEELSG------------AKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVY 142 (290)
T ss_dssp TTEHHHHSSTTHHHHHTT------------CEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB--
T ss_pred ccceeeeeccchhhHhcC------------cEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeC
Confidence 99886543322 3345 46777776553333332 221 1568999999998853 8999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcc
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFP 302 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~ 302 (433)
|.+++++|.++|++||+.++.|.+--.-.......++.++...-| ++.-|++|.+++++ -+.++++++++.+
T Consensus 143 s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D--~v~~~~tK~~g~~~--Gavl~~~~~~i~~---- 214 (290)
T PF01212_consen 143 SLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGAD--SVSFGGTKNGGAPG--GAVLAGNKEFIAK---- 214 (290)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSS--EEEEETTSTT-SSS--EEEEEESHHHHHH----
T ss_pred CHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCC--EEEEEEEccccccc--ceEEEechHHHHH----
Confidence 999999999999999999999998532111111122333322223 45557999887655 3677788886521
Q ss_pred hhHHHHHHHhhccCCCcHHHH-----HHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCcc
Q 045431 303 VAKDFNRIVCTCFNGASNISQ-----AGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAP 370 (433)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~q-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~ 370 (433)
...+.+...........+.. .++...++.. .....+..++.+.+.+.|+.++..+..+..++
T Consensus 215 -~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~-----~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn 281 (290)
T PF01212_consen 215 -ARRQRKRLGGGMRQAGVLAAAELYQFAALRALELW-----LERARHANAMAKRLAAGLEALGGVLPRPVETN 281 (290)
T ss_dssp -HHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECS-----HHHHHCHHHHHHCHHHCHHEECEEEETTSS-H
T ss_pred -HHHHHHHhccCeeecceeeeechhhHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCc
Confidence 11122211111111112222 2334344322 34456667778889999999887766554444
No 357
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.45 E-value=1.9e-11 Score=117.82 Aligned_cols=230 Identities=15% Similarity=0.164 Sum_probs=139.0
Q ss_pred CHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceE
Q 045431 107 EKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKI 185 (433)
Q Consensus 107 ~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 185 (433)
..+..+..|+.+ +.+ .--++++|++.++.+ +.+++.+||.|+++++||.+..+.+.++|+.++
T Consensus 72 i~eAqe~aA~~f----gAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pv----------- 135 (557)
T COG1982 72 IKEAQELAARVF----GAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPV----------- 135 (557)
T ss_pred HHHHHHHHHHHh----CCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceE-----------
Confidence 345555555554 543 467899999999987 699999999999999999999999999996443
Q ss_pred EEeecCccC------Cc-----ccCCCCCCCc-cEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 186 EYMRCTAEN------GF-----FPDLSTVART-DIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 186 ~~~~~~~~~------~~-----~~~~~~~~~~-~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
++....+. ++ ...+.+.+.. |+++++||.+ .|++++ .++|.+++.++++++.+|+++......
T Consensus 136 -yl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~ 210 (557)
T COG1982 136 -YLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDF 210 (557)
T ss_pred -EecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccc
Confidence 22221111 11 1112223455 8888888866 799999 788888899999999999999853222
Q ss_pred CCCCcccccCCCCcceEEEecccccccccccceeeeecccc-ccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHh---
Q 045431 254 DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKE-LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLAC--- 329 (433)
Q Consensus 254 ~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~--- 329 (433)
....+-... ....+++.-|.+|.++ +.-...++..... .+. .+++........++++.....|++..
T Consensus 211 ~~~l~~~~~--~~~~~~~tqS~HK~l~-alSQaS~iHv~~~~~~~------~~r~nea~~~h~STSPsY~l~ASlD~Ar~ 281 (557)
T COG1982 211 SPMLPESAL--NGGADFVTQSTHKLLA-ALSQASMIHVKDGRAVN------HERFNEALMMHQSTSPSYPLMASLDVARM 281 (557)
T ss_pred cccCcchhh--hcCceEEEechhhhhh-hhhhhHHHhhCCCccCC------HHHHHHHHHHHccCCchHHHHHHHHHHHH
Confidence 221212222 1345688999999985 4444557777752 221 24454433333333333333333332
Q ss_pred -cCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecC
Q 045431 330 -LSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGG 366 (433)
Q Consensus 330 -l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~ 366 (433)
....+....++..+..-+.++.+.+.+.+. ++.+..+
T Consensus 282 ~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~ 320 (557)
T COG1982 282 QEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQP 320 (557)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc
Confidence 222222222333445555566666666665 4555433
No 358
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.44 E-value=3.6e-11 Score=123.82 Aligned_cols=207 Identities=11% Similarity=0.079 Sum_probs=134.6
Q ss_pred CccEEEEcCC--CCccccCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc
Q 045431 205 RTDIIFFCSP--NNPTGAAA-TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF 281 (433)
Q Consensus 205 ~~~~i~l~~p--~nPtG~~~-~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~ 281 (433)
++.+ ++..| +.-.|+.+ +++.++++.++|++||+++|.||++.+|...|.......+...+| |-+++|.++
T Consensus 584 ~iAA-vI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PD----Ii~~gKgLt- 657 (817)
T PLN02974 584 HIAA-LIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPD----IACYAKLLT- 657 (817)
T ss_pred CEEE-EEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCC----EEeeccccc-
Confidence 3444 44566 57778765 688999999999999999999999999877776444333433355 336899998
Q ss_pred cc-cceeeeeccccccccCCcchhHHHH------HHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHH
Q 045431 282 TG-VRLGWTVIPKELLFSDGFPVAKDFN------RIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIV 353 (433)
Q Consensus 282 ~G-~r~G~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 353 (433)
.| +.+|.+++++++. +.+. .+.+..+.+.++++.+++.+.|+.... +..+++.+..++..+.+.
T Consensus 658 gG~~Plaa~l~~~~I~--------~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~ 729 (817)
T PLN02974 658 GGLVPLAATLATEEVF--------EAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWD 729 (817)
T ss_pred CCCCccEEEEEcHHHH--------HhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 88 6999999998885 3332 123556677889999988887762211 122333444444444444
Q ss_pred HHH----hhcC-CeeecCCCccEEEEECCCCC---------hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccC
Q 045431 354 ETF----NSLG-FKVYGGKNAPYVWVQFPGRS---------SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGH 417 (433)
Q Consensus 354 ~~l----~~~g-~~~~~~~~g~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~ 417 (433)
+.| .++. +.-+.. -|.++-+.+.... ...+...++.++||.++|. .+.+++. ...+
T Consensus 730 ~~l~~~l~~~p~V~~VRg-~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-------Gnvi~l~pP~~i~ 801 (817)
T PLN02974 730 EELVRAISSLPNVERVVS-LGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-------GNVVYLMCGPTTS 801 (817)
T ss_pred HHHHHHHhhCCCeeEEEe-eeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-------CCEEEEeCCCCCC
Confidence 333 3332 222222 4566666664211 1234555552569999873 1578875 5679
Q ss_pred hhHHHHHHHHHHHhhC
Q 045431 418 RGNVLEACKRFKHLYK 433 (433)
Q Consensus 418 ~~~l~~~l~~l~~~l~ 433 (433)
++++++++++|.+.|.
T Consensus 802 ~e~l~~~~~~l~~~~~ 817 (817)
T PLN02974 802 PETCTRLLRKVYRRLS 817 (817)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998763
No 359
>PLN02590 probable tyrosine decarboxylase
Probab=99.43 E-value=1.6e-10 Score=114.01 Aligned_cols=316 Identities=11% Similarity=0.049 Sum_probs=187.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhccCCCCCC-------cEEEcCChHHHHH-HH---HH-hcC-------CCCEEEEeCC
Q 045431 97 GYSGYGAEQGEKPLRAAIASTFYKDLGIEEG-------DIFVSDGAKCDIS-RL---QI-VFG-------SNVTMAVQDP 157 (433)
Q Consensus 97 ~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~-------~i~~~~G~~~al~-~l---~~-l~~-------~gd~Vl~~~p 157 (433)
....|...++..++.+.+.+|+.+.++.+.+ .=++++|++++.. .+ +. .++ +.-.|.+.+.
T Consensus 158 ~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 158 VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC
Confidence 3456667788999999999999986666542 2456777776643 33 11 121 1224556788
Q ss_pred CChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC-----------CCccEEEEcCCCCccccCCCHHH
Q 045431 158 SYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV-----------ARTDIIFFCSPNNPTGAAATREQ 226 (433)
Q Consensus 158 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~i~l~~p~nPtG~~~~~~~ 226 (433)
+|.++..++..+|... .+++.+|++..+.+..+++.. ..+-+|+-+-...+||.+=+
T Consensus 238 aH~Sv~KAa~ilGlg~---------~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp--- 305 (539)
T PLN02590 238 THSSFRKACLIGGIHE---------ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP--- 305 (539)
T ss_pred chHHHHHHHHHcCCCc---------ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---
Confidence 8999999999988521 157788887433333332210 12334454566778888544
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccCC-CCC-cccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchh
Q 045431 227 LTRLVQFAKDNGSIIVYDSAYALYISDD-NPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVA 304 (433)
Q Consensus 227 ~~~i~~~a~~~~~~li~De~~~~~~~~~-~~~-~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 304 (433)
+++|.++|++||+++.+|.+|+.+..-. ... -+..++.. | -+...++|++. ....+|.+++++.-.........
T Consensus 306 l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~A-D--Sit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~ 381 (539)
T PLN02590 306 LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENA-D--SFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTN 381 (539)
T ss_pred HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccC-C--EEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcC
Confidence 8999999999999999999999754321 111 11222221 1 33557899995 77889988877642100000000
Q ss_pred HHHHHH-----------HhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEE
Q 045431 305 KDFNRI-----------VCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYV 372 (433)
Q Consensus 305 ~~~~~~-----------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~ 372 (433)
..+... ...+...+-..........|+..+.+.++++.++.-+.++++.+.+++. +++++.+..-..+
T Consensus 382 ~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iV 461 (539)
T PLN02590 382 PEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLV 461 (539)
T ss_pred HHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEE
Confidence 001000 0000011111222223344444455667888888888999999999887 7888776555556
Q ss_pred EEECCC--CC-------hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc---ChhHHHHHHHHHHHh
Q 045431 373 WVQFPG--RS-------SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG---HRGNVLEACKRFKHL 431 (433)
Q Consensus 373 ~~~~~~--~~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~~~l~~~l~~l~~~ 431 (433)
.+++.+ .. ..++.+++.+...+.+.+ .. -.+..++|+++.+ ++++++.+++.|.+.
T Consensus 462 cFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-t~--~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 462 CFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISH-TA--LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-eE--ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 666542 11 124455555443344433 22 2345689999743 689999999999775
No 360
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.42 E-value=4.7e-13 Score=126.33 Aligned_cols=277 Identities=13% Similarity=0.117 Sum_probs=166.6
Q ss_pred cCCCCceEEecCCC--CCC-CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCCh
Q 045431 59 KYPDAEVISLGIGD--TTE-PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGA 135 (433)
Q Consensus 59 ~~~~~~~i~l~~g~--~~~-~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~ 135 (433)
..+++..+|+..+. ..+ ..+|.+.+++.+++..... . .......+.+.++++.+....+-..+.+++++++
T Consensus 12 d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~---~---~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sG 85 (339)
T PF00202_consen 12 DVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNY---V---SFSGFTHPEAAELAEKLAELFPGGLDRVFFANSG 85 (339)
T ss_dssp ETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSS---C---STTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSH
T ss_pred ECCCCEEEECCCCccceecCCCccccchhHHHHhhhccc---c---cccceeccchhhhhhhhhhccccccceeeeccCc
Confidence 34566789997553 222 3578999999998876421 1 1122344566677777765444356799999999
Q ss_pred HHHHHH-H-HHh------c-CCCCEEEEeCCCChhhhhhHHHhCCc-ccccccccccceEEEeecCccCC----------
Q 045431 136 KCDISR-L-QIV------F-GSNVTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEKYGKIEYMRCTAENG---------- 195 (433)
Q Consensus 136 ~~al~~-l-~~l------~-~~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 195 (433)
++|++. + .+. . ....+|+..+.+|++.......++.. .....+...+..+..+|.+....
T Consensus 86 seAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 165 (339)
T PF00202_consen 86 SEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNA 165 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHH
Confidence 999986 4 222 2 23478999999998865444443322 22222333334556666643222
Q ss_pred cccCCC--CCCCccEEEEcCC-CCcccc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEE
Q 045431 196 FFPDLS--TVARTDIIFFCSP-NNPTGA-AATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIE 271 (433)
Q Consensus 196 ~~~~~~--~~~~~~~i~l~~p-~nPtG~-~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~ 271 (433)
+...+. ..+++.+|+ ..| +.-.|. ..+++.+++|.++|++||+++|.||++..+...|.......+.-.+| ++
T Consensus 166 ~~~~~~~~~~~~iaavi-vEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PD-iv- 242 (339)
T PF00202_consen 166 LEELIAALNADEIAAVI-VEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPD-IV- 242 (339)
T ss_dssp HHHHHHHHHGGGEEEEE-EESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSS-EE-
T ss_pred HHHHHHhhcCCcEEEEE-EeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCc-cc-
Confidence 000001 123455544 466 444554 44778999999999999999999999998876665443333333344 33
Q ss_pred EecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHH
Q 045431 272 TSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDI 351 (433)
Q Consensus 272 i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 351 (433)
+++|.++ .|+.+|.+++++++. +.+......+++..++++.+++.+.|+.... +++.++.+++.++
T Consensus 243 --~~gK~l~-gG~p~sav~~~~~i~--------~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~---~~~~~~~~~~g~~ 308 (339)
T PF00202_consen 243 --TFGKGLG-GGLPISAVLGSEEIM--------EAFQPGSHGSTFGGNPLSCAAALATLEILEE---EDLLERVRELGER 308 (339)
T ss_dssp --EEEGGGG-TTSSEEEEEEEHHHH--------TTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred --ccccchh-hhhhcccccccchhh--------ccccccccccccccchHhhhhhhhHHHhhcc---HHHHHHHHHHHHH
Confidence 4679998 889999999998874 3332223556666788888888888763222 2234445555555
Q ss_pred HHHHHhh
Q 045431 352 IVETFNS 358 (433)
Q Consensus 352 l~~~l~~ 358 (433)
+.+.|++
T Consensus 309 l~~~L~~ 315 (339)
T PF00202_consen 309 LREGLRE 315 (339)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 361
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.39 E-value=4.3e-11 Score=107.91 Aligned_cols=160 Identities=16% Similarity=0.231 Sum_probs=113.9
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChhhhhhH----HHhCCccccccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPAYVDSS----VIMGQTGEFQKD 178 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 178 (433)
.+-...|.+.|+..= -...- +.++++++|+.. +..++++||+|+..+--|.+....+ +.+|
T Consensus 61 NPT~~vlE~RiAaLE-----GG~aa-~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~G-------- 126 (426)
T COG2873 61 NPTTDVLEERIAALE-----GGVAA-LAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLG-------- 126 (426)
T ss_pred CchHHHHHHHHHHhh-----cchhh-hhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcC--------
Confidence 345677888888752 12222 344566666664 8999999999999998888765544 4455
Q ss_pred ccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCCCC
Q 045431 179 AEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL-YISDDNPR 257 (433)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~-~~~~~~~~ 257 (433)
.++.++..++...+...+ .+++|+||+-+-.||-+.+.+ +++|.++|+++|+++|+|..++. +.. .
T Consensus 127 ----i~v~fvd~~d~~~~~~aI--~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpyl~----r 193 (426)
T COG2873 127 ----IEVRFVDPDDPENFEAAI--DENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPYLC----R 193 (426)
T ss_pred ----cEEEEeCCCCHHHHHHHh--CcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcceec----c
Confidence 377777765433333222 479999999899999999988 88999999999999999998874 111 1
Q ss_pred cccccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 258 SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 258 ~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|+ + .+-.|++.|.+|.+|-.|--+|-+++....
T Consensus 194 P~---~--hGADIVvHS~TK~igGhGt~iGG~iVD~G~ 226 (426)
T COG2873 194 PI---E--HGADIVVHSATKYIGGHGTAIGGVIVDGGK 226 (426)
T ss_pred hh---h--cCCCEEEEeecccccCCccccceEEEeCCc
Confidence 12 1 122388999999998778888877765444
No 362
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.39 E-value=3.2e-10 Score=117.06 Aligned_cols=309 Identities=10% Similarity=0.054 Sum_probs=187.3
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHH---HHHHhc-----CCCCEEEEeCCCChhhhhhH
Q 045431 98 YSGYGA---EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDIS---RLQIVF-----GSNVTMAVQDPSYPAYVDSS 166 (433)
Q Consensus 98 ~~~Y~~---~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~---~l~~l~-----~~gd~Vl~~~p~~~~~~~~~ 166 (433)
++-|.| .+|..++...+.+|+++-.|.+...+...+|++.-+. ++.... ...++|+++.-.|......+
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa 595 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASA 595 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHH
Confidence 445544 3677788888888887755665444444455543222 222221 12367899999997777777
Q ss_pred HHhCCcccccccccccceEEEeecCccCCcccC-CCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCE
Q 045431 167 VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST-----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSI 240 (433)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~ 240 (433)
..+| .+++.++.+.++..+.+ +++ ..++++|++++|+| +|..-+ .+++|+++|+++|..
T Consensus 596 ~~~G------------~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~ 660 (939)
T TIGR00461 596 AMAG------------MQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQ 660 (939)
T ss_pred HHCC------------CEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCE
Confidence 7888 58888998755544332 221 14788999999999 787633 389999999999999
Q ss_pred EEEeccccc-cccCCCCCcccccCCCCcceEEEeccccccc----ccccceeeeeccccccccCCcc-hhHH------HH
Q 045431 241 IVYDSAYAL-YISDDNPRSIFEIPGAKEVAIETSSFSKYAG----FTGVRLGWTVIPKELLFSDGFP-VAKD------FN 308 (433)
Q Consensus 241 li~De~~~~-~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~----~~G~r~G~l~~~~~~~~~~~~~-~~~~------~~ 308 (433)
+++|.++.- ...-..| .. .+-.++.+|.+|+|+ .+|-.+|++.+++.+....-.+ +... -.
T Consensus 661 v~VDgAq~~al~~l~~P---g~----~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq 733 (939)
T TIGR00461 661 VYLDGANMNAQVGLTSP---GD----LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSK 733 (939)
T ss_pred EEEEecChhhCCCCCCc---cc----cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcc
Confidence 999999863 2111111 11 223488999999775 2455689999987654211000 0000 00
Q ss_pred HHHhhcc-CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecC-CCccE---EEEECC------
Q 045431 309 RIVCTCF-NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGG-KNAPY---VWVQFP------ 377 (433)
Q Consensus 309 ~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~~---~~~~~~------ 377 (433)
.+...+. ...+......+..++..-+.+.+++..+.--.+.+++.+.|++ ++++..+ ..+.+ +.++++
T Consensus 734 ~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~ 812 (939)
T TIGR00461 734 SIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKT 812 (939)
T ss_pred ccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhc
Confidence 0011111 1223333344455555455566788888888899999999987 4555433 12332 445665
Q ss_pred CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeeccChhHHHHHHHHHHHh
Q 045431 378 GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRGNVLEACKRFKHL 431 (433)
Q Consensus 378 ~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~l~~~l~~l~~~ 431 (433)
+....++.++|++. |+..-. ..|...+.=.|+.+-..+.+|||+.++.|.++
T Consensus 813 g~~~~dIakrL~d~-G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I 864 (939)
T TIGR00461 813 GIEAIDVAKRLQDY-GFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAI 864 (939)
T ss_pred CCCHHHHHHHHHhC-Ceeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHH
Confidence 25667888888765 987533 33432222234444456899999999998765
No 363
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.39 E-value=3.1e-10 Score=119.06 Aligned_cols=337 Identities=10% Similarity=0.058 Sum_probs=191.3
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC---CCCCHHHHHHHHHHHhccCCCCCCcEEEcC-ChHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA---EQGEKPLRAAIASTFYKDLGIEEGDIFVSD-GAKCD 138 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~la~~l~~~~~~~~~~i~~~~-G~~~a 138 (433)
..+|-++..... .++.+...+.. ... ...++-|.| .+|..++...+.+|+++-.|.+ ++.+.. |++++
T Consensus 499 ~~~i~lGsct~~--~~p~~~~~~~~---~~~-f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~g 570 (954)
T PRK05367 499 RSMIPLGSCTMK--LNAAAEMIPIT---WPE-FANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQG 570 (954)
T ss_pred cceeeCCcCCCc--CCHHHHHHHHh---Ccc-ccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHH
Confidence 457778775443 34443333322 111 122334433 3567788888888887755544 565555 44444
Q ss_pred HHH----HHHh-cCCCC----EEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CC----C-C
Q 045431 139 ISR----LQIV-FGSNV----TMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LS----T-V 203 (433)
Q Consensus 139 l~~----l~~l-~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~-~ 203 (433)
..+ +... .++|+ +|++++..|+.....+..+| .+++.++.+.++..+.+ ++ . .
T Consensus 571 e~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G------------~~vv~v~~d~~G~iD~~~L~~~i~~~~ 638 (954)
T PRK05367 571 EYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAG------------MKVVVVACDENGNIDLDDLRAKAEEHA 638 (954)
T ss_pred HHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCC------------CEEEEECCCCCCCcCHHHHHHHHhccC
Confidence 322 2222 25665 69999999988877788888 58888888755443322 21 1 1
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc--
Q 045431 204 ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF-- 281 (433)
Q Consensus 204 ~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~-- 281 (433)
.++.+|++++|++-.+...+ +++|+++|+++|+++++|.++...... ..+...+ +-.++.+|.+|+|+.
T Consensus 639 ~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~--l~~pg~~----GADi~~~s~HK~f~~P~ 709 (954)
T PRK05367 639 DNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG--LARPGDI----GADVSHLNLHKTFCIPH 709 (954)
T ss_pred CCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC--CCChhhc----CCCEEEecCcccCCCCc
Confidence 24667778788765333344 899999999999999999999632111 0111112 223888999999752
Q ss_pred --cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHH----HHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHH
Q 045431 282 --TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNI----SQAGGLACLSPEGFKAVHEVIGFYKENTDIIVET 355 (433)
Q Consensus 282 --~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (433)
+|-.+|++.+.+.+...-.......-...........+.. ....+..++...+.+.+++..+..-.+++++.+.
T Consensus 710 G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~ 789 (954)
T PRK05367 710 GGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKR 789 (954)
T ss_pred CCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444788888765431100000000000000011111222 2222344444455566677777777889999999
Q ss_pred Hhhc-CCeeecCCCcc--EEEEEC---C---CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHH
Q 045431 356 FNSL-GFKVYGGKNAP--YVWVQF---P---GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEA 424 (433)
Q Consensus 356 l~~~-g~~~~~~~~g~--~~~~~~---~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~ 424 (433)
|++. .+.+..+.+-. =+.+++ + +....++.++|. ++|+.... ..|. ..+.+||+. +.+.+||+++
T Consensus 790 L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G~~~~t-~~~p--v~~~l~i~ptE~~s~~elDr~ 865 (954)
T PRK05367 790 LKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI-DYGFHAPT-MSFP--VAGTLMVEPTESESKAELDRF 865 (954)
T ss_pred HHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH-HCCCeEee-cCCc--cCCEEEEEeeecCCHHHHHHH
Confidence 9774 44443321111 133333 2 245577777774 55998754 2232 357888985 5689999999
Q ss_pred HHHHHHhh
Q 045431 425 CKRFKHLY 432 (433)
Q Consensus 425 l~~l~~~l 432 (433)
+++|+.+.
T Consensus 866 ~~al~~i~ 873 (954)
T PRK05367 866 CDAMIAIR 873 (954)
T ss_pred HHHHHHHH
Confidence 99998763
No 364
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.37 E-value=3.3e-10 Score=112.01 Aligned_cols=314 Identities=11% Similarity=0.045 Sum_probs=179.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhccCCCC-----------C--CcEEEcCChHHHHH-HH---HH-hcC-----------
Q 045431 97 GYSGYGAEQGEKPLRAAIASTFYKDLGIE-----------E--GDIFVSDGAKCDIS-RL---QI-VFG----------- 147 (433)
Q Consensus 97 ~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-----------~--~~i~~~~G~~~al~-~l---~~-l~~----------- 147 (433)
....|...+...++.+.+.+|+.+.++.. + ..=++|+|++.+.. ++ +. .+.
T Consensus 117 n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~ 196 (522)
T TIGR03799 117 NLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVARE 196 (522)
T ss_pred CcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccc
Confidence 34466667788999999999998744211 1 12356777777643 33 22 221
Q ss_pred -----------CCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC------CCCccEE
Q 045431 148 -----------SNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST------VARTDII 209 (433)
Q Consensus 148 -----------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~i 209 (433)
++..|++.+-.|.+....+..+|... .+++.+|++.++..+.+ +++ ..+++.+
T Consensus 197 gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~---------~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~ 267 (522)
T TIGR03799 197 GLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGR---------DNLIAIKTDANNRIDVDALRDKCAELAEQNIKPL 267 (522)
T ss_pred cchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCc---------ccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcE
Confidence 23468888889999888888888411 26788888765444333 221 1344555
Q ss_pred EEc--CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCcccccCCCCcceEEEecccccccccccce
Q 045431 210 FFC--SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD-DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRL 286 (433)
Q Consensus 210 ~l~--~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~ 286 (433)
.++ ..++.||.+-| +++|+++|+++|+++++|.+|+..... .....+ +.+...-..+..|.+|++. ....+
T Consensus 268 ~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~--l~gle~aDSit~d~HK~l~-~P~g~ 341 (522)
T TIGR03799 268 AIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL--LKGIERADSVTIDAHKQLY-VPMGA 341 (522)
T ss_pred EEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH--hcCchhCCEEEEChhhcCC-cCccc
Confidence 554 44678999888 888899999999999999999863321 111111 1221122366779999774 55668
Q ss_pred eeeeccccccccCCcchhHHHH-----HHHh-hccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-
Q 045431 287 GWTVIPKELLFSDGFPVAKDFN-----RIVC-TCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL- 359 (433)
Q Consensus 287 G~l~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 359 (433)
|++++++.............+. .... ....+.+..+ ......++..+...++++.++..+.++++.+.|++.
T Consensus 342 G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~ 420 (522)
T TIGR03799 342 GMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQP 420 (522)
T ss_pred EEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9988875432110000000000 0000 0001111111 122333333334557888888999999999999887
Q ss_pred CCeeecCCCccEEEEECCCCC----------------h-------HHHHHHHHHcCCeEecCCC-----CCCCCCCCeEE
Q 045431 360 GFKVYGGKNAPYVWVQFPGRS----------------S-------WDVFSEILEKTHVVTTPGS-----GFGPGGEGFIR 411 (433)
Q Consensus 360 g~~~~~~~~g~~~~~~~~~~~----------------~-------~~~~~~l~~~~gi~v~~g~-----~f~~~~~~~iR 411 (433)
+++++.+..-..+.+++.+.. . ..+.+++. +.|....... .+...+...+|
T Consensus 421 ~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~t~l~~~~~~g~~~~~lR 499 (522)
T TIGR03799 421 DFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSRTRLTPAQYDHQPTVVFR 499 (522)
T ss_pred CeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEecccccCCCCcEEEE
Confidence 888876544445555542100 0 12333333 3355554322 12122235699
Q ss_pred Eeecc---ChhHHHHHHHH
Q 045431 412 VSAFG---HRGNVLEACKR 427 (433)
Q Consensus 412 i~~~~---~~~~l~~~l~~ 427 (433)
+++.+ +.++++..++.
T Consensus 500 ~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 500 VVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEecCCCCCHHHHHHHHHH
Confidence 99754 68888887765
No 365
>PLN02263 serine decarboxylase
Probab=99.34 E-value=2.7e-09 Score=102.82 Aligned_cols=315 Identities=10% Similarity=0.031 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCc--EEEcCChHHHHHH-H---HHhcCCCCEE
Q 045431 79 EVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGD--IFVSDGAKCDISR-L---QIVFGSNVTM 152 (433)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~--i~~~~G~~~al~~-l---~~l~~~gd~V 152 (433)
..+.+.+.-.+.+.++......| .-+..++.+.+-+|+.+.++.++++ =.+|+|++++... + +... +...|
T Consensus 105 s~l~~~l~~~~nN~Gdp~~~s~~--~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~-~~~vv 181 (470)
T PLN02263 105 GALGQLQHFSINNLGDPFIESNY--GVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF-PDGIL 181 (470)
T ss_pred hhHHHHHHhhccCCCCccccCCc--chhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc-CCcEE
Confidence 34444444444443331112223 2267899999999999877776543 4678888887653 3 2223 33478
Q ss_pred EEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC-----CCCccEEEEcCCCCccccCCCHHH
Q 045431 153 AVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST-----VARTDIIFFCSPNNPTGAAATREQ 226 (433)
Q Consensus 153 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~i~l~~p~nPtG~~~~~~~ 226 (433)
++++-.|.++..++..+| .+++.+|.+.++..+.+ +++ ..++-+|+.+-.+.++|.+=+
T Consensus 182 y~S~~aH~Sv~KAa~llg------------i~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp--- 246 (470)
T PLN02263 182 YASRESHYSVFKAARMYR------------MECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD--- 246 (470)
T ss_pred EEcCCccHHHHHHHHhcC------------CcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---
Confidence 889999999999999999 47788888755443333 211 112444555677889998644
Q ss_pred HHHHHHHHHHcCC-----EEEEeccccccccC--CCCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 227 LTRLVQFAKDNGS-----IIVYDSAYALYISD--DNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 227 ~~~i~~~a~~~~~-----~li~De~~~~~~~~--~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
+++|.++|+++|+ ++.+|.+|+++... .... ...+.. .-.=+.-+++|+++ ....+|.++.++..+..
T Consensus 247 i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~-~~df~~--~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~- 321 (470)
T PLN02263 247 LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP-KVTFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINV- 321 (470)
T ss_pred HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc-ccCCCc--CccEEEECCccccC-CCcCEEEEEEehhhHhh-
Confidence 8888888999986 99999999875431 1111 111111 11233457899996 77889999888665310
Q ss_pred CcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECCCC
Q 045431 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFPGR 379 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~~~ 379 (433)
.....+-+.........+-+......+...|+..+.+.+++..++.-++++++.+.|++.|+........+.+.+.-+.
T Consensus 322 ~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~- 400 (470)
T PLN02263 322 LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK- 400 (470)
T ss_pred hccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc-
Confidence 0000000100000001111111123334455555666778888888899999999999988876544455555555442
Q ss_pred ChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHHHh
Q 045431 380 SSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFKHL 431 (433)
Q Consensus 380 ~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~~~ 431 (433)
.+. .. +|..+.+- ++.++++++. +.+.+++.++.|++.
T Consensus 401 --~~~----~~-~gW~L~~~-------~~~~Hivvmphv~~~~id~fi~DL~~~ 440 (470)
T PLN02263 401 --DEE----FV-RRWQLACQ-------GNIAHVVVMPSVTIEKLDYFLKELVEK 440 (470)
T ss_pred --hHH----hh-cceEEccC-------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 111 12 36666541 2458888643 678899999998775
No 366
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.34 E-value=1.7e-10 Score=118.29 Aligned_cols=306 Identities=11% Similarity=0.093 Sum_probs=181.1
Q ss_pred CCCCC---CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH---HH-hcCC----CCEEEEeCCCChhhhhhHH
Q 045431 99 SGYGA---EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL---QI-VFGS----NVTMAVQDPSYPAYVDSSV 167 (433)
Q Consensus 99 ~~Y~~---~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l---~~-l~~~----gd~Vl~~~p~~~~~~~~~~ 167 (433)
+-|.| .+|..++-..+.+++++-.|.+.-.+...+|++.-+..+ .. ...+ .++|+++.-.|......+.
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~ 609 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQ 609 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHH
Confidence 45666 789999988888888875555544444555555443322 22 2222 3577888888855555566
Q ss_pred HhCCcccccccccccceEEEeecCccCCcccC-CCC-----CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEE
Q 045431 168 IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST-----VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSII 241 (433)
Q Consensus 168 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~l 241 (433)
..| .+++.++.+.++..+.+ +++ .+++.+|.+++|++-.+. .+.+++|+++|+++|+++
T Consensus 610 ~~G------------ieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Galv 674 (954)
T PRK12566 610 MAG------------MRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGGQV 674 (954)
T ss_pred HCC------------CEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCCEE
Confidence 666 58889998765543332 222 146667777777664433 456999999999999999
Q ss_pred EEeccccccccCCCCCcccccCCCCcceEEEecccccccc----cccceeeeeccccc---cccCCcc--hhHHHHHHHh
Q 045431 242 VYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF----TGVRLGWTVIPKEL---LFSDGFP--VAKDFNRIVC 312 (433)
Q Consensus 242 i~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~----~G~r~G~l~~~~~~---~~~~~~~--~~~~~~~~~~ 312 (433)
++|.++.- .... .....++ +..++.++++|+|+. +|.-+|.+.+.+.+ +.. .+- ....-.+...
T Consensus 675 ~vDgA~~~-a~~~-l~~Pg~~----GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~-~P~~d~~G~~~r~ga 747 (954)
T PRK12566 675 YMDGANLN-AQVG-LARPADI----GADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVAN-HPVVPVEGPDPNNGA 747 (954)
T ss_pred EEEeeChh-hccC-CCChhhc----CCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccC-CCCcCCCCCCCCCCc
Confidence 99999862 1111 1111222 234899999999852 24446766666533 210 000 0000000111
Q ss_pred h-ccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccE---EEEECC------CCCh
Q 045431 313 T-CFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPY---VWVQFP------GRSS 381 (433)
Q Consensus 313 ~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~---~~~~~~------~~~~ 381 (433)
. .....+.....++..++...+.+ +.+.......+.+++.+.|.+. ++.+.+ ..+.+ +.+++. +.+.
T Consensus 748 ~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~-~~~~~~hEfii~~~~l~~~~g~~~ 825 (954)
T PRK12566 748 VSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRG-RNERVAHECILDLRPLKAQTGISE 825 (954)
T ss_pred eeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCC-CCCCeeeEEEEEccccccccCCCH
Confidence 1 11222323344455566555555 6666666677888999998764 444422 22331 223332 2455
Q ss_pred HHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHhh
Q 045431 382 WDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 382 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~l 432 (433)
.++.++|+ ++||.... ..| + ..+++|++. +.+.+||++++++|+++.
T Consensus 826 ~dvakRL~-d~Gihapt-~~f-P-v~~~LmIepTE~eskeEIDrf~eAL~~I~ 874 (954)
T PRK12566 826 EDVAKRLM-DYGFHAPT-MSF-P-VPGTLMVEPTESESKAELDRFVEAMLSIR 874 (954)
T ss_pred HHHHHHHH-HCCcEEeE-Eee-c-cCCEEEEEeeeeCCHHHHHHHHHHHHHHH
Confidence 77888887 66887643 333 2 367899994 668999999999998764
No 367
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.29 E-value=3.3e-09 Score=94.13 Aligned_cols=330 Identities=14% Similarity=0.167 Sum_probs=195.7
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCC-CCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYG-AEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
.++|-|+-+.....++....+..+.+..+... .....+. ....--++-+.+.+.+...+|..+.+++++.+++..++-
T Consensus 30 ~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~-~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k 108 (407)
T COG3844 30 GGVIYLDGNSLGARPRAVTARLQQVATDEWGE-GLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFK 108 (407)
T ss_pred CCeEEeeccccccCchHHHHHHHHHHHHHHHh-hhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHH
Confidence 46888877665433333333333333333321 1222221 122334555566666666679999999999999988874
Q ss_pred -HHHhc--CCCCEEEEeCC-CChhh----hhhHHHhCCcccccccccccceEEEeecCccCCccc-CCC--CCCCccEEE
Q 045431 142 -LQIVF--GSNVTMAVQDP-SYPAY----VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP-DLS--TVARTDIIF 210 (433)
Q Consensus 142 -l~~l~--~~gd~Vl~~~p-~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~i~ 210 (433)
+.+.+ ++|++|++.+- +|+.- ...+..++. ..+-+....+ ++. ...++.+++
T Consensus 109 ~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~-----------------~~~~~~~~~P~~~~~~~~dd~AvV~ 171 (407)
T COG3844 109 VLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGI-----------------GYDLEGVIAPRALEEAITDDVAVVL 171 (407)
T ss_pred HHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcc-----------------cccceeeeChHHHHHhhccceEEEE
Confidence 55554 56888888664 44432 222333331 1111111111 111 135778888
Q ss_pred EcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccccc-ceeee
Q 045431 211 FCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGV-RLGWT 289 (433)
Q Consensus 211 l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~-r~G~l 289 (433)
|++.++-||+.++ +.+|-++++++|++++-|-+|+-... |..+-. .+-.+-|++..|.++ +|- -.+++
T Consensus 172 L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav---p~~Lh~----~gaDfaigcsyKYLN-gGPGapa~l 240 (407)
T COG3844 172 LSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV---PVDLHA----AGADFAIGCSYKYLN-GGPGAPAGL 240 (407)
T ss_pred eccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc---ceeecc----cCCCeeeeeeceecc-CCCCCceeE
Confidence 8899999999998 88999999999999999999984322 222222 223477889999886 433 25666
Q ss_pred eccccccccCCcchhHH------------------HHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHH
Q 045431 290 VIPKELLFSDGFPVAKD------------------FNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDI 351 (433)
Q Consensus 290 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 351 (433)
.+.+.......+..... ..++.+ ...+.++..+....|+-...-.+.+++++--...++
T Consensus 241 ~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~---gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~ 317 (407)
T COG3844 241 FVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLC---GTQPVLSLAALEGALDIFADVDITELRKKSLALTDY 317 (407)
T ss_pred EeccccccccccccccccCCCCcchhhhccCcCccccceee---CCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHH
Confidence 66665542211111111 111111 123344444333333322222367777777777888
Q ss_pred HHHHHhhc----CCeeecCC----CccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee---ccChhH
Q 045431 352 IVETFNSL----GFKVYGGK----NAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA---FGHRGN 420 (433)
Q Consensus 352 l~~~l~~~----g~~~~~~~----~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~---~~~~~~ 420 (433)
+.+.++.. ++.+..|. .|-.+.+..| ...++++.|..+ ||..- ...++.+|+.+ |.+-+|
T Consensus 318 fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaLi~r-GVigD------~R~P~vlRfgftPlY~~~~D 388 (407)
T COG3844 318 FIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--HGYQVMQALIDR-GVIGD------FREPDVLRFGFTPLYVSFVD 388 (407)
T ss_pred HHHHHHhccccCCcEEeccchhhhccceeeEecC--cHHHHHHHHHHc-Ccccc------ccCCCeeeecCccceechhH
Confidence 88877764 56666653 3556767666 456777776654 98762 23468899995 779999
Q ss_pred HHHHHHHHHHhhC
Q 045431 421 VLEACKRFKHLYK 433 (433)
Q Consensus 421 l~~~l~~l~~~l~ 433 (433)
+-.+++.|.++|.
T Consensus 389 Vw~AV~~L~evL~ 401 (407)
T COG3844 389 VWDAVDALEEVLD 401 (407)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998763
No 368
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.23 E-value=1.4e-09 Score=105.61 Aligned_cols=277 Identities=15% Similarity=0.164 Sum_probs=172.0
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCC-CCcEEEcCChHHHHHH-HHH----hc-CC
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIE-EGDIFVSDGAKCDISR-LQI----VF-GS 148 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~-~~~i~~~~G~~~al~~-l~~----l~-~~ 148 (433)
.+++...+++...+.. .....+..++..++.+.+.+++.+.++.+ .-.=.+|+|+++++.+ +.. .. ..
T Consensus 73 ~~~~~a~~~~~~~~~~-----nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~ 147 (460)
T COG0076 73 RVPPVAAELLVSALNK-----NLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRA 147 (460)
T ss_pred CCHHHHHHHHHHHHhh-----cCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHh
Confidence 3566667777777653 22222233488999999999999866664 3344688888888653 321 11 11
Q ss_pred ---C------CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC---C--CCCcc--EEEEc
Q 045431 149 ---N------VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS---T--VARTD--IIFFC 212 (433)
Q Consensus 149 ---g------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~--~i~l~ 212 (433)
+ .+|+++.-.|.++...+..+|. ....++.++. ....++. + ...+- +|+-+
T Consensus 148 ~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~------------~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~ 214 (460)
T COG0076 148 LAESGKPGGKPNIVCSETAHFSFEKAARYLGL------------GLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGT 214 (460)
T ss_pred hhcccccCCCCeEEecCcchhHHHHHHHHhCC------------CceeEEeccC-ccccCHHHHHHHHHhhccCceEEEE
Confidence 1 2699999999999999999994 5666666553 2222221 1 12222 36667
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC--CCCCc-ccccCCCCcceEEEecccccccccccceeee
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD--DNPRS-IFEIPGAKEVAIETSSFSKYAGFTGVRLGWT 289 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~--~~~~~-~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l 289 (433)
..+.+||.+ +++++|.++|+++++++.+|.+|+.+... ..... ...++. -.-+.-+++|.+ +....+||+
T Consensus 215 aGtT~~G~i---Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~---vdSIt~d~HK~g-~aP~~~G~i 287 (460)
T COG0076 215 AGTTDTGSI---DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEG---VDSITVDGHKYG-LAPIGCGVV 287 (460)
T ss_pred ecCCCCCcc---CCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCC---ceEEEECccccc-CCCCCceEE
Confidence 889999985 55999999999999999999999986542 21111 122222 224456899987 588889999
Q ss_pred eccccc-cccCCcchhHHHHH---HHhhccCC-CcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-Cee
Q 045431 290 VIPKEL-LFSDGFPVAKDFNR---IVCTCFNG-ASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG-FKV 363 (433)
Q Consensus 290 ~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~ 363 (433)
+.++.. +.+ ...+...+.. .......+ -+.-...+....+...+.+.+.++.++.-+.++.+.+.+++.| +++
T Consensus 288 l~rd~e~l~~-~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~ 366 (460)
T COG0076 288 LFRDEEALRR-ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFEL 366 (460)
T ss_pred EEECHHHhhh-hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEe
Confidence 998873 210 0000000000 00000011 1111122222333334445678888888899999999999985 888
Q ss_pred ecCCCccEEEEECCC
Q 045431 364 YGGKNAPYVWVQFPG 378 (433)
Q Consensus 364 ~~~~~g~~~~~~~~~ 378 (433)
..+...+.+.+++++
T Consensus 367 ~~~p~l~~V~fr~~~ 381 (460)
T COG0076 367 VNEPELPIVAFRLKD 381 (460)
T ss_pred ecCCccceEEEEcCC
Confidence 876677888888863
No 369
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.22 E-value=8.6e-09 Score=106.66 Aligned_cols=317 Identities=13% Similarity=0.113 Sum_probs=190.5
Q ss_pred EecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC-----CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH
Q 045431 67 SLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA-----EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 67 ~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
-++.|.++--.|+.+.+.+.+.- ..+..|+| ++|..+.-=.+...+.+..|.+..|.-+..+++++.++
T Consensus 68 fig~G~y~~~~p~~i~r~v~~~p------~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa 141 (939)
T TIGR00461 68 YIGMGYYGTILPPVIQRNLLENP------GWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEA 141 (939)
T ss_pred cCCCCcCCCcCChHHHHHHHhCc------hhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHH
Confidence 34677766567887776555521 33455544 23333332222233333347788888888999888875
Q ss_pred -HHHh-c--CCCCEEEEeCCCChhhhhhHH----HhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcC
Q 045431 142 -LQIV-F--GSNVTMAVQDPSYPAYVDSSV----IMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCS 213 (433)
Q Consensus 142 -l~~l-~--~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~ 213 (433)
+.+. . +++++|++++-.||.+...++ ..| .+++.++.+ +++..-++.++++.+
T Consensus 142 ~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g------------~~v~~~~~~-------~l~~~~~~~~v~~q~ 202 (939)
T TIGR00461 142 MALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFG------------IEVIVVDCS-------DIKKAVDVFGCLLQY 202 (939)
T ss_pred HHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcC------------cEEEEEcHH-------HHhhcCCEEEEEEEC
Confidence 3332 2 234899999999998886666 334 366666442 122211566777778
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc----cccceeee
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF----TGVRLGWT 289 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~----~G~r~G~l 289 (433)
|+. +|.+. ++++|.++++++|.+++++.-...+.. ..+-.++ +-.|++++ +|.||. .|--.|++
T Consensus 203 Pn~-~G~ie---d~~~i~~~~h~~gal~~~~ad~~al~l---l~~Pge~----GaDi~vg~-~q~fg~p~g~GGP~aG~~ 270 (939)
T TIGR00461 203 PAT-DGSIL---DYKQLIDALHSHKSLVSVAADLMALTL---LTPPGHY----GADIVLGS-SQRFGVPMGYGGPHAAFF 270 (939)
T ss_pred CCC-CeEEe---cHHHHHHHHHHcCCEEEEEechHHhCC---cCCHHHc----CCcEEeeC-CCccCCCCCCCCCceeee
Confidence 854 89875 489999999999999998543221211 1111122 12255664 555553 24457888
Q ss_pred ecccccccc----------CC-----c-----chhHHHHHHHhhccCCCcHHHHHH-HHHhcCcCChhHHHHHHHHHHHH
Q 045431 290 VIPKELLFS----------DG-----F-----PVAKDFNRIVCTCFNGASNISQAG-GLACLSPEGFKAVHEVIGFYKEN 348 (433)
Q Consensus 290 ~~~~~~~~~----------~~-----~-----~~~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~~~~~~~~~~~~~~~~~ 348 (433)
.+++.+... +. . .-.+.+++.+..++.+++....+. +..++.-.+-+.++++.++...+
T Consensus 271 a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~ 350 (939)
T TIGR00461 271 AVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSL 350 (939)
T ss_pred eecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 888776521 00 0 001123444444333333222221 12222223446678889999999
Q ss_pred HHHHHHHHhhcCCeeecCCCccE--EEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHH
Q 045431 349 TDIIVETFNSLGFKVYGGKNAPY--VWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEA 424 (433)
Q Consensus 349 ~~~l~~~l~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~ 424 (433)
..++.+.|++.|+++..+ .+| +.++++..+..++.+.++++ ||.+... .++.+++|+ ..+.+|++.+
T Consensus 351 a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~~-gi~l~~~------~~~~i~~s~~E~~t~~di~~l 421 (939)
T TIGR00461 351 TSILANGLENDPHELINK--TWFDTLTVKVGNGISSELLKAAEEF-NINLRAV------DTTTVGIALDETTTKADVENL 421 (939)
T ss_pred HHHHHHHHHhCCCcccCC--CccceEEEEeCCCCHHHHHHHHHHC-CCeeeec------CCCEEEEEeecCCCHHHHHHH
Confidence 999999999999988754 344 44555434566777777655 9997642 236799996 5689999999
Q ss_pred HHHHH
Q 045431 425 CKRFK 429 (433)
Q Consensus 425 l~~l~ 429 (433)
++.+.
T Consensus 422 ~~~~~ 426 (939)
T TIGR00461 422 LKVFD 426 (939)
T ss_pred HHHhc
Confidence 99884
No 370
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.21 E-value=3.4e-11 Score=98.84 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=55.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhc--c--CCCCCCcEEEcCChHHHHHH-HHHhcCCCCEEEEeCCCChh
Q 045431 100 GYGAEQGEKPLRAAIASTFYK--D--LGIEEGDIFVSDGAKCDISR-LQIVFGSNVTMAVQDPSYPA 161 (433)
Q Consensus 100 ~Y~~~~g~~~lr~~la~~l~~--~--~~~~~~~i~~~~G~~~al~~-l~~l~~~gd~Vl~~~p~~~~ 161 (433)
.|++..|.++||+++|+|+.+ + +.+++++|++|+|+++++.+ +..+++|||.|++++|+|++
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 487889999999999999986 4 45789999999999999997 58889999999999999974
No 371
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.18 E-value=5.8e-10 Score=101.00 Aligned_cols=270 Identities=19% Similarity=0.260 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCC-CCCCHHHHHHHHHHHhccCCCCCCcEE---EcCChHHHHH-HHHHhcCCCCEEE
Q 045431 79 EVITSALAKRSYALSTQEGYSGYGA-EQGEKPLRAAIASTFYKDLGIEEGDIF---VSDGAKCDIS-RLQIVFGSNVTMA 153 (433)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~la~~l~~~~~~~~~~i~---~~~G~~~al~-~l~~l~~~gd~Vl 153 (433)
..+++|+++.--......+.++|+- +.|-..|.+-.|+.+ ++.. .++ ++|| |.||. .+..+++|||+.+
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf----gaE~-ALVRpq~vSG-THAi~~~Lfg~LrpGD~ll 100 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF----GAED-ALVRPQFVSG-THAIALALFGVLRPGDELL 100 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC----T-SE-EEEETTS-SH-HHHHHHHHHHH--TT-EEE
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh----Cchh-hhhcccccch-HHHHHHHHHhcCCCCCeEE
Confidence 4566777664433333455556644 345555555555554 5432 222 4455 55555 4899999999998
Q ss_pred Ee-CCCChhhhhhHHHhCC-cccccccccccceEEEeecCccCCcccCC-CC--CCCccEEEEc-CCCCccccCCCHHHH
Q 045431 154 VQ-DPSYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYMRCTAENGFFPDL-ST--VARTDIIFFC-SPNNPTGAAATREQL 227 (433)
Q Consensus 154 ~~-~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~l~-~p~nPtG~~~~~~~~ 227 (433)
.. -.-|.....++-..|. .|-+..+|. ....+++.+++.++.+. ++ .+++|++++. +.-+.+=-.++.+++
T Consensus 101 ~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi---~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 101 SITGKPYDTLEEVIGIRGNGPGSLKEFGI---KYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEI 177 (403)
T ss_dssp ESSSS--CCHHHHHTSSSSSSSSTGGGT----EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHH
T ss_pred EcCCCchhhHHHHhCCCCCCCCChHHhCc---eeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHH
Confidence 63 3334444443332331 233555664 44556666655544431 11 3789999997 667777778899999
Q ss_pred HHHHHHHHHc--CCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccc--eeeeeccccccccCCcch
Q 045431 228 TRLVQFAKDN--GSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVR--LGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 228 ~~i~~~a~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r--~G~l~~~~~~~~~~~~~~ 303 (433)
+++++++++. ++++++|.+|++|+-...|... + -.+..||+-|..| .|+- -||++++++++
T Consensus 178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~v----G---ADl~aGSLIKNpG-GgiAptGGYIaGr~~lV------- 242 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEV----G---ADLMAGSLIKNPG-GGIAPTGGYIAGRKDLV------- 242 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGG----T----SEEEEETTSGGG-TTT-SS-EEEEESHHHH-------
T ss_pred HHHHHHHHhhCCCeEEEEeCCcceeccccCcccc----c---hhheeccceeCCC-CCccCcCCEEechHHHH-------
Confidence 9999999864 6899999999999876555433 1 1388999999987 6652 47999999986
Q ss_pred hHHHHHHHhhc----cCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCC----ccEEEEE
Q 045431 304 AKDFNRIVCTC----FNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLGFKVYGGKN----APYVWVQ 375 (433)
Q Consensus 304 ~~~~~~~~~~~----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----g~~~~~~ 375 (433)
+......... ..+.+.-... .+++ +.-.-..+...--+-.-+....|+++|+++.+... -..-.+.
T Consensus 243 -e~~a~RLTaPGiG~e~G~t~~~~R---~~~Q--GlFlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~ 316 (403)
T PF06838_consen 243 -ERAAYRLTAPGIGKEVGATLGTNR---LMFQ--GLFLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIE 316 (403)
T ss_dssp -HHHHHHHS-TTTGGGSS--TTTHH---HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE
T ss_pred -HHHHhhhcCCccccccccCcchHH---HHHh--HHhhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEE
Confidence 3332211111 1111111111 1111 11111333333344445556678888999876432 3456677
Q ss_pred CCC
Q 045431 376 FPG 378 (433)
Q Consensus 376 ~~~ 378 (433)
+..
T Consensus 317 l~~ 319 (403)
T PF06838_consen 317 LGS 319 (403)
T ss_dssp -SS
T ss_pred CCC
Confidence 763
No 372
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.13 E-value=1e-08 Score=97.23 Aligned_cols=317 Identities=15% Similarity=0.155 Sum_probs=161.7
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC-----CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH
Q 045431 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA-----EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL 142 (433)
Q Consensus 68 l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l 142 (433)
++.|..+.-.|+.+.+.+.+ +. ..++.|+| ++|..+.--....++.+..|.+.-|.-+-.|++++-.++
T Consensus 70 iG~G~y~~~~P~~i~~~i~~---~~---ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~ 143 (429)
T PF02347_consen 70 IGAGSYTHYVPAVIDRNILS---RP---EFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAM 143 (429)
T ss_dssp --CTTT-----HHHHH-HHC---CH---HCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHH
T ss_pred ccccccCceeChhhcCcccc---Ch---hhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHH
Confidence 35555544456655542222 22 23344544 344444333333334443366655667778888776653
Q ss_pred ---HHhc-CCCCEEEEeCCCChhhhhhHHHhCC-cccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCc
Q 045431 143 ---QIVF-GSNVTMAVQDPSYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNP 217 (433)
Q Consensus 143 ---~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nP 217 (433)
...- +.+++|++++-.|+.+...++.... .+ .+++.++.++++..+ .+++.+|++.+|++
T Consensus 144 ~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g---------~~iv~~~~~~~~~~d-----~~~~a~v~vq~Pn~- 208 (429)
T PF02347_consen 144 LMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLG---------IEIVEVPLDEDGTTD-----DDDTAAVMVQNPNT- 208 (429)
T ss_dssp HHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCC---------EEEEEE-BBTTCSB------STTEEEEEEESS-T-
T ss_pred HHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCC---------eEEEEecccccCCcc-----ccCeEEEEeecCCC-
Confidence 2233 3346999999999998886664432 12 377777776543222 46888999999965
Q ss_pred cccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccc----cccceeeeeccc
Q 045431 218 TGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF----TGVRLGWTVIPK 293 (433)
Q Consensus 218 tG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~----~G~r~G~l~~~~ 293 (433)
.|..-+ +++|.++++++|.++++ .+.- ..... ..+-.++ +-.|++++ +|.||. .|--.|++.+++
T Consensus 209 ~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~-l~~Pge~----GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~ 277 (429)
T PF02347_consen 209 FGVFED---IKEIADIAHAAGALVIV-GADP-NALGG-LKSPGEY----GADIVVGE-HQTFGIPMGFGGPGAGFFAVRE 277 (429)
T ss_dssp TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCT-C--GGGG----T-SEEEEC-CTTTT---CCC-S--EEEEE-G
T ss_pred CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhC-cCChhhc----CccEEeeC-CCCCcccCCCCCCCeeeEEEhh
Confidence 788644 99999999999999886 3222 21111 1111222 22366877 888874 355689999998
Q ss_pred ccccc-------------C-------CcchhHHHHHHHhhccCCCcHHHH-HHHHHhcCcCChhHHHHHHHHHHHHHHHH
Q 045431 294 ELLFS-------------D-------GFPVAKDFNRIVCTCFNGASNISQ-AGGLACLSPEGFKAVHEVIGFYKENTDII 352 (433)
Q Consensus 294 ~~~~~-------------~-------~~~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 352 (433)
+++.. . ...-.+.++|.+..++.+++.... .++..++.-.+.+.+++..+....++.++
T Consensus 278 ~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl 357 (429)
T PF02347_consen 278 DLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYL 357 (429)
T ss_dssp GGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 87632 0 011123456666555554443333 23333443345578899999999999999
Q ss_pred HHHHhhc-CCeeecCCCccE--EEEECCCCChHHHHHHHHHc---CCeEecCCCCCCCCCCCeEEEeec--cChhHHHHH
Q 045431 353 VETFNSL-GFKVYGGKNAPY--VWVQFPGRSSWDVFSEILEK---THVVTTPGSGFGPGGEGFIRVSAF--GHRGNVLEA 424 (433)
Q Consensus 353 ~~~l~~~-g~~~~~~~~g~~--~~~~~~~~~~~~~~~~l~~~---~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~l~~~ 424 (433)
.+.|++. +..+.. ..+| +....+. ....+++++ .|+... ....+.+-+|+. .+.++|+.+
T Consensus 358 ~~~L~~~~~~~~~~--~~f~e~v~~~~~~----~~~~~l~~~~~~~gl~~~------~~~~~~~li~~TE~~t~edid~l 425 (429)
T PF02347_consen 358 AERLKKIYGLPFDN--PFFFEFVVVFSKD----KEVEELLKRGIEGGLNLR------YPDDGALLICVTETRTKEDIDRL 425 (429)
T ss_dssp HHHHCCTTBECSSS--SSBSSEEEEESS-----HHHHHHHHTT----EEEG------GG-SSEEEEE--TT--HHHHHHH
T ss_pred HHHHHHhcCcccCC--CCceeeeeecCCc----HHHHHHHHHHHhcCCCcc------ccCCCeEEEEccCCCCHHHHHHH
Confidence 9999986 444332 3333 3333322 222223332 243332 223447777763 368889888
Q ss_pred HHHH
Q 045431 425 CKRF 428 (433)
Q Consensus 425 l~~l 428 (433)
++.|
T Consensus 426 v~~f 429 (429)
T PF02347_consen 426 VEAF 429 (429)
T ss_dssp HH--
T ss_pred HhcC
Confidence 8764
No 373
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.10 E-value=1e-07 Score=90.14 Aligned_cols=324 Identities=15% Similarity=0.145 Sum_probs=186.1
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHH-
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISR- 141 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~- 141 (433)
+-+|||-+-...-.+.+..|+++.. +-..|+.+.....|.+.+++.+ |. +.++.|..+..+-.+
T Consensus 41 dV~IDLrSDTgT~apS~~m~aAM~~---------GDD~Y~gdpSv~~Lee~vael~----G~--E~alpthqGRgaE~Il 105 (467)
T TIGR02617 41 DVFIDLLTDSGTGAVTQSMQAAMMR---------GDEAYSGSRSYYALAESVKNIF----GY--QYTIPTHQGRGAEQIY 105 (467)
T ss_pred CeEEECccCCCCCCCCHHHHHHHHc---------CCcccccCchHHHHHHHHHHHh----CC--ceEEECCCCchHHHHH
Confidence 3468886544332356777777775 1235777888899999999997 54 357777666666665
Q ss_pred HHHhcC-CCCEEEEeCC----CChh-h---hhhHHHhCCcccccccccccceEEEeec----------CccCCcccC-CC
Q 045431 142 LQIVFG-SNVTMAVQDP----SYPA-Y---VDSSVIMGQTGEFQKDAEKYGKIEYMRC----------TAENGFFPD-LS 201 (433)
Q Consensus 142 l~~l~~-~gd~Vl~~~p----~~~~-~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~-~~ 201 (433)
+..+++ |||.+++..+ .+.. + .......|. .+..++. ...++++.+ ++
T Consensus 106 ~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~------------~~~~l~~~ea~~~~~~~~fkG~~dl~~le 173 (467)
T TIGR02617 106 IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGC------------TARNVYTKEAFDTGVRYDFKGNFDLEGLE 173 (467)
T ss_pred HHhhcccccccccccccccccceEEEEecchHHHHHcCc------------eeecccchhhcccccCCCCCCCcCHHHHH
Confidence 466777 7888876554 1111 1 223444553 2332211 111222222 11
Q ss_pred C---C---CCccEEEEcCCCC-ccccCCCHHHHHHHHHHHHHcCCEEEEeccccc----c------ccCCCCCccccc--
Q 045431 202 T---V---ARTDIIFFCSPNN-PTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL----Y------ISDDNPRSIFEI-- 262 (433)
Q Consensus 202 ~---~---~~~~~i~l~~p~n-PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~----~------~~~~~~~~~~~~-- 262 (433)
. . .++..+..+--+| --|+++|.+.++++.++|++||+.++.|.+--. | .+. ..++.++
T Consensus 174 ~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~--~~si~eI~r 251 (467)
T TIGR02617 174 RGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYK--NWSIEQITR 251 (467)
T ss_pred HHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhc--CCCHHHHHH
Confidence 1 0 2233322221123 348999999999999999999999999986432 1 112 2333333
Q ss_pred --CCCCcceEEEeccccccccc-ccceeeeeccccccccCCcchhHHHHHHHh--------hccCCCcHHHHHHHHHhcC
Q 045431 263 --PGAKEVAIETSSFSKYAGFT-GVRLGWTVIPKELLFSDGFPVAKDFNRIVC--------TCFNGASNISQAGGLACLS 331 (433)
Q Consensus 263 --~~~~~~vi~i~S~sK~~~~~-G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~q~~~~~~l~ 331 (433)
....| .+.-|+||.++.| | |+++++++.+ .+.+.+.+. .+..+.+.-...+...-|.
T Consensus 252 E~~~~aD--svt~slsKglgApvG---g~Lag~d~~~-------~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~ 319 (467)
T TIGR02617 252 ETYKYAD--MLAMSAKKDAMVPMG---GLLCFKDDSF-------FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY 319 (467)
T ss_pred HhhccCC--EEEEEcCCCCCCccc---ceEEecchhH-------HHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhh
Confidence 12223 4456899998766 5 6888887721 111222111 1122344444554444444
Q ss_pred cCCh-hHHHHHHHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEEC----CC-----CChHHHHHHHHHcCCeEecC-CC
Q 045431 332 PEGF-KAVHEVIGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQF----PG-----RSSWDVFSEILEKTHVVTTP-GS 400 (433)
Q Consensus 332 ~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~----~~-----~~~~~~~~~l~~~~gi~v~~-g~ 400 (433)
+... .++..+. ...++|.+.|.+.|+.+.. .+|.-++++- |+ .....+..+|-.+.||.-.- |+
T Consensus 320 e~~~~~yl~~ri----~qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~ 394 (467)
T TIGR02617 320 DGMNLDWLAYRI----NQVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGS 394 (467)
T ss_pred hcccHHHHHHHH----HHHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecc
Confidence 3222 2333332 3446788889999999987 7888787753 32 24556777777787886422 22
Q ss_pred C-CC--CC-------CCCeEEEeec---cChhHHHHHHHHHHHhh
Q 045431 401 G-FG--PG-------GEGFIRVSAF---GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 401 ~-f~--~~-------~~~~iRi~~~---~~~~~l~~~l~~l~~~l 432 (433)
. ++ +. .-..+|+++- -|.+.++-..++|..+.
T Consensus 395 ~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~ 439 (467)
T TIGR02617 395 LLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVK 439 (467)
T ss_pred eecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHH
Confidence 2 11 11 1257999962 37888888888887764
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.09 E-value=5.1e-08 Score=87.89 Aligned_cols=345 Identities=14% Similarity=0.137 Sum_probs=193.6
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCC--CCCCCCCCHHHHHHHHHHHh-ccCCCCCC----cEEEcCChHHH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYS--GYGAEQGEKPLRAAIASTFY-KDLGIEEG----DIFVSDGAKCD 138 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~~~~g~~~lr~~la~~l~-~~~~~~~~----~i~~~~G~~~a 138 (433)
|.|=-.++ -....+.+++-..+.+... .++. +|.-..-.-+-.+.+++.-. .-++++|+ ||..-+|+.+.
T Consensus 43 ieLIaSEN--Fts~aVmeAlGS~ltNKYS-EGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPAN 119 (477)
T KOG2467|consen 43 IELIASEN--FTSRAVMEALGSCLTNKYS-EGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPAN 119 (477)
T ss_pred eeEeeccc--chHHHHHHHHhHHhhcccc-cCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchh
Confidence 44444443 2567788888888765432 2222 33222222233333333321 13456654 78888999998
Q ss_pred HHHHHHhcCCCCEEEEeCCCChhh-hhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC------CCCccEEEE
Q 045431 139 ISRLQIVFGSNVTMAVQDPSYPAY-VDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST------VARTDIIFF 211 (433)
Q Consensus 139 l~~l~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~l 211 (433)
+....++++|+|+|.-.+.-..+. .+....-+. .+ .....|.+-.++.+++..++ .|++. .-++++|+-
T Consensus 120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~k-kI--Sa~SiyFeSmPYkv~~~TG~-IDYD~Le~~A~~frPk~iia 195 (477)
T KOG2467|consen 120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTK-KI--SATSIYFESMPYKVDPSTGY-IDYDKLEKTATLFRPKLIIA 195 (477)
T ss_pred hHHHhhhcCCCCeeeeccCCCCCccccccccCCc-ee--eeeeeecccCceeeCCCCCc-eehHHHHHHHHhcCCcEEEe
Confidence 888899999999985433222222 111111111 00 01111223333445555443 23222 357886653
Q ss_pred cCCCCccccCCCHH-HHHHHHHHHHHcCCEEEEecccc-ccccCCC-CCcccccCCCCcceEEEecccccccccccceee
Q 045431 212 CSPNNPTGAAATRE-QLTRLVQFAKDNGSIIVYDSAYA-LYISDDN-PRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 212 ~~p~nPtG~~~~~~-~~~~i~~~a~~~~~~li~De~~~-~~~~~~~-~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
-. ..|+.. +-.++.++|.+.|.+++.|-+|- +++..+. |.|+ +. ..|+..+.+|++ .|-|-|.
T Consensus 196 G~------SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPF-ey-----~DiVTTTTHKsL--RGPRg~m 261 (477)
T KOG2467|consen 196 GT------SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPF-EY-----CDIVTTTTHKSL--RGPRGAM 261 (477)
T ss_pred cc------ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcc-cc-----cceeeccccccc--cCCccee
Confidence 12 223322 45777777889999999999985 4655554 3333 22 238888999987 8999999
Q ss_pred eeccccccccC-------CcchhHHHHHHHhhccCCCcHHHHH-HHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC
Q 045431 289 TVIPKELLFSD-------GFPVAKDFNRIVCTCFNGASNISQA-GGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG 360 (433)
Q Consensus 289 l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 360 (433)
+..++.+-..+ ...+.++++........+.+.-... +.+-+|..-.........+++.++.+.+.+.|.+.|
T Consensus 262 IFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~G 341 (477)
T KOG2467|consen 262 IFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRG 341 (477)
T ss_pred EEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88877553222 2233344443222222222222222 222334333334457778888999999999999999
Q ss_pred CeeecC-CCccEEEEECCC-CChHHHHHHHHHcCCeEecCCCCCCC---CCCCeEEEee--cc----ChhHHHHHHHHHH
Q 045431 361 FKVYGG-KNAPYVWVQFPG-RSSWDVFSEILEKTHVVTTPGSGFGP---GGEGFIRVSA--FG----HRGNVLEACKRFK 429 (433)
Q Consensus 361 ~~~~~~-~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRi~~--~~----~~~~l~~~l~~l~ 429 (433)
++++.. .....+.+++.+ ..+...++..++..+|.++--..++. -.++.|||.. .+ .++|+++..+-|.
T Consensus 342 y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~ 421 (477)
T KOG2467|consen 342 YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFID 421 (477)
T ss_pred ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHH
Confidence 988643 334457778762 23344556666767887765544432 2367899993 22 3788887777665
Q ss_pred Hh
Q 045431 430 HL 431 (433)
Q Consensus 430 ~~ 431 (433)
++
T Consensus 422 ~a 423 (477)
T KOG2467|consen 422 RA 423 (477)
T ss_pred HH
Confidence 54
No 375
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.99 E-value=2.9e-08 Score=94.73 Aligned_cols=260 Identities=14% Similarity=0.132 Sum_probs=151.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhccCCCCC-------CcEEEcCChHHHHHH-HH----Hhc----CC-----CC-EEEEe
Q 045431 98 YSGYGAEQGEKPLRAAIASTFYKDLGIEE-------GDIFVSDGAKCDISR-LQ----IVF----GS-----NV-TMAVQ 155 (433)
Q Consensus 98 ~~~Y~~~~g~~~lr~~la~~l~~~~~~~~-------~~i~~~~G~~~al~~-l~----~l~----~~-----gd-~Vl~~ 155 (433)
...|...+...++...+.+|+.+.++.+. ..=++|+|+++++.. +. .+. .. +. .|++.
T Consensus 68 ~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s 147 (373)
T PF00282_consen 68 GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVS 147 (373)
T ss_dssp TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccc
Confidence 34554556788999999999998666551 235678888877643 31 111 11 12 56667
Q ss_pred CCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC-------CCCcc-EEEEcCCCCccccCCCHHH
Q 045431 156 DPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST-------VARTD-IIFFCSPNNPTGAAATREQ 226 (433)
Q Consensus 156 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~-~i~l~~p~nPtG~~~~~~~ 226 (433)
+-+|.+...++..+| ..++.+|+++++..+.+ +++ ...+- +|+.+-....||.+ +.
T Consensus 148 ~~aH~S~~Kaa~~lG------------lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~---D~ 212 (373)
T PF00282_consen 148 EQAHYSIEKAARILG------------LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI---DP 212 (373)
T ss_dssp TTS-THHHHHHHHTT------------SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----S
T ss_pred cccccHHHHhcceee------------eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccc---cC
Confidence 779999999999999 47889999875443332 221 11222 44555667888886 55
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccC-CCC-CcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchh
Q 045431 227 LTRLVQFAKDNGSIIVYDSAYALYISD-DNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVA 304 (433)
Q Consensus 227 ~~~i~~~a~~~~~~li~De~~~~~~~~-~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~ 304 (433)
+++|.++|+++++++.+|.+|+...+- ... .-+..++.. .=+.-+++|+++ ....+|+++.++...........
T Consensus 213 l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~a---dSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~ 288 (373)
T PF00282_consen 213 LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERA---DSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSIN 288 (373)
T ss_dssp HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGE---SEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEE
T ss_pred HHHHhhhccccceeeeecccccccccccccccccccccccc---cccccchhhhhc-CCccceeEEeecccchHHHhccC
Confidence 899999999999999999999973221 111 112222221 133447899997 77789998888764311000000
Q ss_pred HH-HH----------HHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccEE
Q 045431 305 KD-FN----------RIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPYV 372 (433)
Q Consensus 305 ~~-~~----------~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~~ 372 (433)
.. +. .....+..++-......+...++..+.+.+++..++..+.++.+.+.+++. ++++..+..-..+
T Consensus 289 ~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~v 368 (373)
T PF00282_consen 289 ADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIV 368 (373)
T ss_dssp ETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEE
T ss_pred hhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEE
Confidence 00 00 000001111112222223334444445677888888899999999999988 6888766666666
Q ss_pred EEEC
Q 045431 373 WVQF 376 (433)
Q Consensus 373 ~~~~ 376 (433)
.+++
T Consensus 369 cFr~ 372 (373)
T PF00282_consen 369 CFRY 372 (373)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6653
No 376
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.93 E-value=1.4e-06 Score=80.84 Aligned_cols=328 Identities=14% Similarity=0.152 Sum_probs=191.5
Q ss_pred EecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCC--CCCHHHHHHHHHH---HhccCCCCCCcEEEcCChHHHHHH
Q 045431 67 SLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAE--QGEKPLRAAIAST---FYKDLGIEEGDIFVSDGAKCDISR 141 (433)
Q Consensus 67 ~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~la~~---l~~~~~~~~~~i~~~~G~~~al~~ 141 (433)
-++.|.++--.|+.+.+-+.+. ...+..|+|- .-....-++|=+| +....|.+..|--+-.+++++-++
T Consensus 79 fiG~GyY~~~~P~vI~rnile~------pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEA 152 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILEN------PEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEA 152 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcC------ccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHH
Confidence 4578888777888877666552 2556666552 1222222333332 222236666666677777777664
Q ss_pred -H--HHhcC-CCCEEEEeCCCChhhhhhHHHhCCc-ccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCC
Q 045431 142 -L--QIVFG-SNVTMAVQDPSYPAYVDSSVIMGQT-GEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNN 216 (433)
Q Consensus 142 -l--~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~n 216 (433)
+ ...-+ +.++++++.-+|+...+.++..-.. + .+++..+.++... .... ...++-++++.+|+
T Consensus 153 m~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g---------~~i~~~~~~d~~~-l~~~-~~~~~~gv~vQyP~- 220 (450)
T COG0403 153 MLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLG---------IEIEVVDADDLDD-LESA-DDGDVFGVLVQYPN- 220 (450)
T ss_pred HHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCc---------eEEEEeccchhhh-hhhc-cccCeEEEEEecCC-
Confidence 2 33333 3589999999999998887654321 1 2455555542111 1111 23467788887885
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEe-ccccccccCCCCCcccccCCCCcceEEEecccc---cccccccceeeeecc
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYD-SAYALYISDDNPRSIFEIPGAKEVAIETSSFSK---YAGFTGVRLGWTVIP 292 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK---~~~~~G~r~G~l~~~ 292 (433)
-+|. ..+++++|.+.+++++.++++= |.-+ + .+...++..+-.|++|+... =+|++|-.+||..+.
T Consensus 221 ~~G~--~~~d~~~l~~~~h~~~al~~v~aDpla-L-------~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~ 290 (450)
T COG0403 221 TFGI--VEEDLRALIEAAHSAGALVIVAADPLA-L-------GLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVK 290 (450)
T ss_pred CCCc--cchhHHHHHHHHhhcCCEEEEEechhH-h-------hccCCccccCCceEEecCcccCCCcCCCCcceeeeeEh
Confidence 4663 2556999999999999887742 2111 1 11122222233488887654 233456778999888
Q ss_pred cccccc--------------------CCcchhHHHHHHHhhccCCCcHHHHHHHHHhcC-cCChhHHHHHHHHHHHHHHH
Q 045431 293 KELLFS--------------------DGFPVAKDFNRIVCTCFNGASNISQAGGLACLS-PEGFKAVHEVIGFYKENTDI 351 (433)
Q Consensus 293 ~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 351 (433)
+++... ...+-.+.++|-+..++.+++....+.+..+.- -.+-..++++..+..+...+
T Consensus 291 ~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~ 370 (450)
T COG0403 291 DEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAY 370 (450)
T ss_pred HhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 887531 011223346666666666655444333332222 23346789999999999999
Q ss_pred HHHHHhhc--CCeeecCCCccE--EEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHH
Q 045431 352 IVETFNSL--GFKVYGGKNAPY--VWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEAC 425 (433)
Q Consensus 352 l~~~l~~~--g~~~~~~~~g~~--~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l 425 (433)
+.+.|++. |+++... .+| +.++++......++.+.. ..|+-++.- ..+++=+++ ..+.++++.++
T Consensus 371 la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~~~~~l~~~~~-~~G~~L~~~------~~~~~~ia~tEt~t~~~i~~l~ 441 (450)
T COG0403 371 LAAGLKEIGAGVELVFD--HFFDTFTVRVPEEVAEALLAAAI-AGGINLRRV------DADTVLIALTETTTKEDIDALV 441 (450)
T ss_pred HHHHHhhcCCceEeccc--cceeeEEEecchhHHHHHHHHHH-hcCCceeee------cCCceEEEeecccCHHHHHHHH
Confidence 99999965 5777653 555 445555322333333333 347777542 233566666 34689999999
Q ss_pred HHHHHh
Q 045431 426 KRFKHL 431 (433)
Q Consensus 426 ~~l~~~ 431 (433)
+.+...
T Consensus 442 ~~~~~~ 447 (450)
T COG0403 442 AAFGGV 447 (450)
T ss_pred HHHhhh
Confidence 888654
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.84 E-value=8e-07 Score=82.35 Aligned_cols=341 Identities=13% Similarity=0.088 Sum_probs=201.6
Q ss_pred CceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC---CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHH
Q 045431 63 AEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA---EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDI 139 (433)
Q Consensus 63 ~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al 139 (433)
..+|.|++..+.+.+-.+..-+-.... ..++-|.| .+|..++...+.+||..--|.+.=.+...+|++.=.
T Consensus 66 ~~m~PLGSCTMK~Np~~e~~~~~~p~f------~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~ 139 (496)
T COG1003 66 RGMIPLGSCTMKLNPKAEMKPATWPEF------ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEY 139 (496)
T ss_pred cCccCCcccccccCchhhcccccccch------hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhh
Confidence 467888887765433222111111111 22233333 578999999999999874444444444557776443
Q ss_pred ---HHHHHhc-CCC----CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC--CCCccE
Q 045431 140 ---SRLQIVF-GSN----VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST--VARTDI 208 (433)
Q Consensus 140 ---~~l~~l~-~~g----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~ 208 (433)
.+|.... ..| +.+++++-.|........+.| .+++.+++++++..+.+ ++. .+++.+
T Consensus 140 aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G------------~~VV~V~~~~~G~VDlddLk~k~~~~~Aa 207 (496)
T COG1003 140 AGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG------------FKVVVVKCDENGNVDLDDLRAKAEDNLAA 207 (496)
T ss_pred HHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC------------ceEEEEecCCCCCccHHHHHHHhccceeE
Confidence 3344443 233 689999999988888888888 68999999988766554 222 367889
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEeccccccccc----cc
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT----GV 284 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~----G~ 284 (433)
+.|+||+. .|.- .+.+++|+++.+++|..+..|.+.---..+ +.......-. |+=--++|+|+.| |-
T Consensus 208 lMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG-----~~rPGd~G~D-V~HlNLHKTF~iPHGGGGP 278 (496)
T COG1003 208 LMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVG-----LARPGDMGFD-VVHLNLHKTFCIPHGGGGP 278 (496)
T ss_pred EEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhc-----cccccccccc-eEEeecccccccCCCCCCC
Confidence 99999954 5654 778999999999999999999886532211 1111111111 2223478887542 34
Q ss_pred ceeeeeccccccccCCc----chhHHH--H--H---HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHH
Q 045431 285 RLGWTVIPKELLFSDGF----PVAKDF--N--R---IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIV 353 (433)
Q Consensus 285 r~G~l~~~~~~~~~~~~----~~~~~~--~--~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 353 (433)
..|=|.+..++.-..-. .....+ . . .........|......+..++..-+.+.+++.-+..--+.+++.
T Consensus 279 G~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia 358 (496)
T COG1003 279 GAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIA 358 (496)
T ss_pred CCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHH
Confidence 46666666555311000 000100 0 0 00111222344444445666665555667777777778889999
Q ss_pred HHHhhc-CCeeecCCCccE-EEEECC------CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeec--cChhHHHH
Q 045431 354 ETFNSL-GFKVYGGKNAPY-VWVQFP------GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAF--GHRGNVLE 423 (433)
Q Consensus 354 ~~l~~~-g~~~~~~~~g~~-~~~~~~------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~l~~ 423 (433)
+.|+.. .+.+.+.....+ +.++.. +....+++++|+.- |+.- |.-.|...-.+.+-|-.. .+.+++++
T Consensus 359 ~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~-GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDr 436 (496)
T COG1003 359 RRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDY-GFHA-PTMYFPLIVAGTLMIEPTESESKEELDR 436 (496)
T ss_pred HHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhc-CCCC-CcccCccccccceeecCCCCCCHHHHHH
Confidence 999874 333332211122 334443 56778888888764 8876 444554333455655542 36788999
Q ss_pred HHHHHHHhh
Q 045431 424 ACKRFKHLY 432 (433)
Q Consensus 424 ~l~~l~~~l 432 (433)
.+++|.++.
T Consensus 437 f~dami~I~ 445 (496)
T COG1003 437 FIDAMIAIR 445 (496)
T ss_pred HHHHHHHHH
Confidence 999987763
No 378
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.78 E-value=4.8e-07 Score=79.64 Aligned_cols=203 Identities=19% Similarity=0.290 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCC-CCCCHHHHHHHHHHHhccCCCCCC--cEEEcCChHHHHHHHHHhcCCCCEEEEe
Q 045431 79 EVITSALAKRSYALSTQEGYSGYGA-EQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVFGSNVTMAVQ 155 (433)
Q Consensus 79 ~~~~~a~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~la~~l~~~~~~~~~--~i~~~~G~~~al~~l~~l~~~gd~Vl~~ 155 (433)
..++++.++.-.......+.++|+- +-|-..|.+-.|+-+ +.... ...+.||+.+.-.++..+++|||+.+..
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i 113 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIISGTHAIACALFGILRPGDELLYI 113 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHh----ccccceeeeeeecchhHHHHHHHhccCCCCeEEEe
Confidence 4556666553322222234445644 567777777777776 44322 4457787766656789999999998764
Q ss_pred CC-CChhhhhhHHHhCC-cccccccccccceEEEeecCccCCcccC-C--CCCCCccEEEEc-CCCCccccCCCHHHHHH
Q 045431 156 DP-SYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYMRCTAENGFFPD-L--STVARTDIIFFC-SPNNPTGAAATREQLTR 229 (433)
Q Consensus 156 ~p-~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~i~l~-~p~nPtG~~~~~~~~~~ 229 (433)
.- -|....+.+-.-|. .+-+..++.+| ..+++..++..+.+ + ...+++|+|.+. +..+..--+++.+++++
T Consensus 114 ~G~PYDTLeevIG~rg~~~gSL~dfgi~Y---~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~ 190 (416)
T COG4100 114 TGSPYDTLEEVIGLRGEGQGSLKDFGIKY---KAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEE 190 (416)
T ss_pred cCCcchhHHHHhccCCCCcccHHHhCcce---eecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHH
Confidence 32 34444444333331 12245555443 34555444333222 1 114789998886 55555556688999999
Q ss_pred HHHHHHHc--CCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccc--eeeeecccccc
Q 045431 230 LVQFAKDN--GSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVR--LGWTVIPKELL 296 (433)
Q Consensus 230 i~~~a~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r--~G~l~~~~~~~ 296 (433)
++++.++- ++++++|.+|++|.-...|... +-.+..||+-|.-| .|+- -||+.+..+++
T Consensus 191 ~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~v-------GaDliAGSLIKNpG-GgiaktGGYiaGk~~~v 253 (416)
T COG4100 191 MITFVKEINPNVIVFVDNCYGEFVEEKEPTHV-------GADLIAGSLIKNPG-GGIAKTGGYIAGKAELV 253 (416)
T ss_pred HHHHHHhcCCCEEEEEeccchhhhhccCcccc-------chhhhccceeeCCC-CceeeccceeechHHHH
Confidence 99999874 6899999999998876545432 12277899999877 6642 37999998886
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.74 E-value=6.3e-07 Score=83.25 Aligned_cols=218 Identities=15% Similarity=0.123 Sum_probs=132.5
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHH-HHHHHhccCCC-CCCcEEEcCChHHHHHHH-HHhcCCCCEE
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAA-IASTFYKDLGI-EEGDIFVSDGAKCDISRL-QIVFGSNVTM 152 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~-la~~l~~~~~~-~~~~i~~~~G~~~al~~l-~~l~~~gd~V 152 (433)
...++..+++.+.+..+.+ + .|.-..|...-|-. ++..++ ++ ..+.++++++++.++.++ .++..++..|
T Consensus 38 ~~~~e~iea~~~~~~~~v~---L-e~~l~~g~~~~R~~~~~~~~~---~~~~aea~~ivnnn~aAVll~~~al~~~~EvV 110 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVE---L-ETDLKTGKRGARLTELAELLC---GLTGAEAAAIVNNNAAAVLLTLNALAEGKEVV 110 (395)
T ss_pred cCCHHHHHHHHHHhcccce---e-eeecccchhhHHHHHHHHHHh---cccchhheeeECCcHHHHHHHHhhhccCCeEE
Confidence 4677888888888775432 2 44343343333333 233221 33 367889999999998874 5555544444
Q ss_pred -----EEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC--CCCCccEEEEc-CCCCccccCCCH
Q 045431 153 -----AVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS--TVARTDIIFFC-SPNNPTGAAATR 224 (433)
Q Consensus 153 -----l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~-~p~nPtG~~~~~ 224 (433)
+++ +..+++.++++.+| +.++.+..... -...+++ -.+++++++-+ ++|.+.--.++
T Consensus 111 is~g~lV~-gg~~~v~d~~~~aG------------~~l~EvG~tn~-t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~- 175 (395)
T COG1921 111 VSRGELVE-GGAFRVPDIIRLAG------------AKLVEVGTTNR-THLKDYELAINENTALLLKVHSSNYGFTGMLS- 175 (395)
T ss_pred EEcccccc-CCCCChhHHHHHcC------------CEEEEecccCc-CCHHHHHHHhccCCeeEEEEeecccccccccc-
Confidence 233 67788899999999 35555543221 1122222 24688877766 44443333344
Q ss_pred HHHHHHHHHHHHcCCEEEEeccccccccCC-CCCcccccCCCCcceEEEecccccccccccceeeeeccccccccCCcch
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYALYISDD-NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPV 303 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~ 303 (433)
.++++++|+++++++|+|++-....... ....+... +-.+++.|-.|.+ .|.+-|.++++++++
T Consensus 176 --~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~----GaDLV~~SgdKll--gGPqaGii~GkKelI------- 240 (395)
T COG1921 176 --EEELVEIAHEKGLPVIVDLASGALVDKEPDLREALAL----GADLVSFSGDKLL--GGPQAGIIVGKKELI------- 240 (395)
T ss_pred --HHHHHHHHHHcCCCEEEecCCccccccccchhHHHhc----CCCEEEEecchhc--CCCccceEechHHHH-------
Confidence 6778889999999999999887543321 12223222 1238889999998 488899999999997
Q ss_pred hHHHHHHHhhccCCCcHHHHHHHHHhcC
Q 045431 304 AKDFNRIVCTCFNGASNISQAGGLACLS 331 (433)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 331 (433)
+++++...........+..++..++|+
T Consensus 241 -~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 241 -EKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred -HHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 555554433334444455544444443
No 380
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=98.68 E-value=2.4e-09 Score=82.88 Aligned_cols=47 Identities=15% Similarity=0.057 Sum_probs=40.4
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccc---cccCC-CCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGN---LGKLQ-AGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~---~~~l~-~g~~~~~ 48 (433)
+|+..+|.+|.|+||++|||.|+||..++||.||+ |..|. .|++...
T Consensus 18 ~qIk~~I~~g~l~pGdkLPSvRelA~~~~VNpnTv~raY~eLE~eG~i~t~ 68 (125)
T COG1725 18 NQIKEQIASGELKPGDKLPSVRELAKDLGVNPNTVQRAYQELEREGIVETK 68 (125)
T ss_pred HHHHHHHHhCCcCCCCCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEe
Confidence 67889999999999999999999999999999995 66554 3776654
No 381
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.64 E-value=2.7e-06 Score=74.95 Aligned_cols=198 Identities=12% Similarity=0.107 Sum_probs=122.3
Q ss_pred CCccccCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCC-CcccccCCCCcceEEEecccccccccccceeeeecc
Q 045431 215 NNPTGAAAT-REQLTRLVQFAKDNGSIIVYDSAYALYISDDNP-RSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIP 292 (433)
Q Consensus 215 ~nPtG~~~~-~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~ 292 (433)
+.=.|+++| ....+++++..+.+|-..|.||+.-+|..-|.. ..+..++-.+| |-++.|.+| .|..++.++..
T Consensus 219 QSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD----IVtmgKpmG-NGhPVa~Vatt 293 (452)
T KOG1403|consen 219 QSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD----IVTMGKPMG-NGHPVAAVATT 293 (452)
T ss_pred HhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc----hheecccCC-CCCeeeEEecc
Confidence 444566665 457899999999999999999999988766542 22222222233 447899998 99999999999
Q ss_pred ccccccCCcchhHHHHH--HHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc--CCeeecCC-
Q 045431 293 KELLFSDGFPVAKDFNR--IVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL--GFKVYGGK- 367 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~~~- 367 (433)
+++- +.+.. +....+.+.++.+.++.++.++....+.++...+++ -+.+...|+++ ..+.++.-
T Consensus 294 keIA--------~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~v---G~~L~~lL~~~k~kh~~IGDvR 362 (452)
T KOG1403|consen 294 KEIA--------QAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQV---GEKLEVLLRRLKQKHECIGDVR 362 (452)
T ss_pred HHHH--------HHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHH---HHHHHHHHHHHhhhccceeccc
Confidence 8883 44432 334456678999999988888743333334444444 44444444443 23333322
Q ss_pred -CccEEEEECCC---------CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhh
Q 045431 368 -NAPYVWVQFPG---------RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 368 -~g~~~~~~~~~---------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l 432 (433)
-|+|+-+++-. ..+..++.++-+.++|.+..- ....+.+.|- ++-++++.++.+..|.++|
T Consensus 363 GvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD----GPh~NilKiKPPmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 363 GVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD----GPHRNILKIKPPMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred cceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC----CCCCceeecCCCcccChhhHHHHHHHHHHHH
Confidence 45666666531 123345566666778888542 1234556655 3446777666666666554
No 382
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.57 E-value=5e-05 Score=78.92 Aligned_cols=315 Identities=13% Similarity=0.105 Sum_probs=182.4
Q ss_pred EEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCC-----CCCH----HHHHHHHHHHhccCCCCCCcEEEcCChH
Q 045431 66 ISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAE-----QGEK----PLRAAIASTFYKDLGIEEGDIFVSDGAK 136 (433)
Q Consensus 66 i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~-----~g~~----~lr~~la~~l~~~~~~~~~~i~~~~G~~ 136 (433)
.-++.|.++--.|..+.+.+.+.- ..++.|+|- +|.. ++...+++.. |.+..|--+-.|++
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~------~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt----Gm~vaNASl~D~at 151 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENP------GWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT----GLDLANASLLDEAT 151 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCc------hhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh----Cchhhhhhhccchh
Confidence 456788877667887755555521 345556542 2322 2333344333 55555555556766
Q ss_pred HHHHH---HHHhcC-CCCEEEEeCCCChhhhhhHHHhCC-cccccccccccceEEEeecCccCCcccCCCCCCCccEEEE
Q 045431 137 CDISR---LQIVFG-SNVTMAVQDPSYPAYVDSSVIMGQ-TGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFF 211 (433)
Q Consensus 137 ~al~~---l~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 211 (433)
++-++ .....+ +..+|++++-.|+.+...++..-. .+ .+++.- ++...+ ..++-++++
T Consensus 152 A~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g---------~~i~~~------~~~~~~--~~~~~~v~v 214 (954)
T PRK12566 152 AAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFG---------FELVVD------AVDNLA--AHAVFGALL 214 (954)
T ss_pred HHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCC---------cEEEEc------chhhcC--CCCEEEEEE
Confidence 65553 223332 256899999999998877664431 11 133321 111111 135778888
Q ss_pred cCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccc----ccccccee
Q 045431 212 CSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYA----GFTGVRLG 287 (433)
Q Consensus 212 ~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~----~~~G~r~G 287 (433)
.+|+. .|.+ +++++|.+++++.|.++|+ .+.- +... +..-++..+-.|++|+ ++.| |.+|--.|
T Consensus 215 q~P~~-~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~-----ll~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag 282 (954)
T PRK12566 215 QYPDT-HGEI---RDLRPLIDQLHGQQALACV-AADL-LSLL-----VLTPPGELGADVVLGS-TQRFGVPMGYGGPHAA 282 (954)
T ss_pred ECCCC-ceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHh-----CCCChhhcCCcEEeeC-CCcCCCCCCCCCCCee
Confidence 88854 7887 4589999999999988662 2211 1111 1111122222366764 3433 34466689
Q ss_pred eeecccccccc--------------------CCcchhHHHHHHHhhccCCCcHHHHHHHHHhc-CcCChhHHHHHHHHHH
Q 045431 288 WTVIPKELLFS--------------------DGFPVAKDFNRIVCTCFNGASNISQAGGLACL-SPEGFKAVHEVIGFYK 346 (433)
Q Consensus 288 ~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l-~~~~~~~~~~~~~~~~ 346 (433)
|+.+++.+... ....-.+.++|-+..++.+++....+.+..++ --.+-+.++++.++..
T Consensus 283 ~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~ 362 (954)
T PRK12566 283 YFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVH 362 (954)
T ss_pred eeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 99988877521 01122234566666666555544433333332 2234466788888999
Q ss_pred HHHHHHHHHHhhcCCeeecCCCccE--EEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHH
Q 045431 347 ENTDIIVETFNSLGFKVYGGKNAPY--VWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVL 422 (433)
Q Consensus 347 ~~~~~l~~~l~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~ 422 (433)
.+..++.+.|.+.|+++... .+| +.+++ +....++..+.++ .||-++-- +++.+.+|+ ..+.+|++
T Consensus 363 ~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~-~~~~~~~~~~a~~-~~~n~r~~------~~~~~~~s~de~~~~~~~~ 432 (954)
T PRK12566 363 RLTAILAAGLEAKGIKRLNR--HFFDTLTLEV-GGAQAAIIESAEA-ARINLRIL------GRGRLGVSLDETCDEATVA 432 (954)
T ss_pred HHHHHHHHHHHhcCCccccC--CccceEEEEc-cCCHHHHHHHHHH-CCCeeEEe------CCCeEEEEeCCCCCHHHHH
Confidence 99999999999999887643 455 33444 2245556665554 48888642 245788887 45789999
Q ss_pred HHHHHHH
Q 045431 423 EACKRFK 429 (433)
Q Consensus 423 ~~l~~l~ 429 (433)
.++..+.
T Consensus 433 ~~~~~f~ 439 (954)
T PRK12566 433 RLFDIFL 439 (954)
T ss_pred HHHHHhc
Confidence 9888773
No 383
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.51 E-value=3.3e-05 Score=70.66 Aligned_cols=329 Identities=14% Similarity=0.166 Sum_probs=175.0
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCC--CCC-CCCCCHHHHHHHHHHHhccCCCCCC-cEEEcCCh-HHHH
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYS--GYG-AEQGEKPLRAAIASTFYKDLGIEEG-DIFVSDGA-KCDI 139 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~-~~~g~~~lr~~la~~l~~~~~~~~~-~i~~~~G~-~~al 139 (433)
+.+|+.|. -..|+++++.+++.+..... .+.+ .-+ ...-...+-+...+.+...++++.+ .|++..|+ +...
T Consensus 6 ~~nFsaGP--a~lp~~vL~~a~~e~~~~~g-~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf 82 (365)
T COG1932 6 VYNFSAGP--AALPPEVLQQAQKELLDWNG-LGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCc--ccCCHHHHHHHHHHHhhhcc-CCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHH
Confidence 56777774 34677777777776655421 1111 111 1222233333333333334466543 66666555 5667
Q ss_pred HH-HHHhcCCCCEEEEeCCCChhh-hhhHHHhCCcccccccccccceEEEee-cCccCCcccCCCC--C-CCccEEEEcC
Q 045431 140 SR-LQIVFGSNVTMAVQDPSYPAY-VDSSVIMGQTGEFQKDAEKYGKIEYMR-CTAENGFFPDLST--V-ARTDIIFFCS 213 (433)
Q Consensus 140 ~~-l~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~-~~~~~i~l~~ 213 (433)
.+ .+.++.++..-.+..-.|... ..-.+.++... .+.... ...+-+..+++.. . .+..-|++|.
T Consensus 83 ~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~----------~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~~~ 152 (365)
T COG1932 83 AMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQP----------KLIDARIEEAGYGSIPDLSKWDFSDNDAYVHFCW 152 (365)
T ss_pred HHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccc----------cccccceeccCccCCCChhhcccCCCccEEEEec
Confidence 76 477876553212233344432 12223333110 111111 0111222333332 1 1222266665
Q ss_pred CCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeeccc
Q 045431 214 PNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPK 293 (433)
Q Consensus 214 p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~ 293 (433)
...-+|+-++. ...+.. +.++|.|..-.-+. .+.++..++ ++..|--|.+|..| ++.++.++
T Consensus 153 NeTi~Gv~v~~--~p~~~~-----~~~~v~D~SS~ils---r~iDvsk~d------viyagaQKnlGpaG--ltvvIvr~ 214 (365)
T COG1932 153 NETISGVEVPE--LPDIGS-----DGLLVADASSAILS---RPIDVSKYD------VIYAGAQKNLGPAG--LTVVIVRP 214 (365)
T ss_pred CCcccceEccC--CCCCCC-----CceEEEecccHHhc---CCCChhHcc------eEEEehhhccCccc--eEEEEEcH
Confidence 55667877662 222211 27788887655332 244444442 55567899999888 89999999
Q ss_pred cccccC----CcchhHHH-HHHHhhccCCCcHHHHHHHHHhcC----cCChhHHHHHHHHHHHHHHHHHHHHhhcCCee-
Q 045431 294 ELLFSD----GFPVAKDF-NRIVCTCFNGASNISQAGGLACLS----PEGFKAVHEVIGFYKENTDIIVETFNSLGFKV- 363 (433)
Q Consensus 294 ~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~q~~~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~- 363 (433)
.++.+. .+.+..-. .....++.++++.++-+.+...++ .++ ++.+.++-+++.+.|.+.+.+.++.-
T Consensus 215 ~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG---l~~~~~rn~~ka~~LY~~id~s~fy~~ 291 (365)
T COG1932 215 DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGG---LEALEARNQAKAQLLYDWIDKSDFYRN 291 (365)
T ss_pred HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 987442 11111111 112234445566665554443332 233 57778888899999999999875432
Q ss_pred --e-cCCCccEEEEECCCCC-hHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHHHhh
Q 045431 364 --Y-GGKNAPYVWVQFPGRS-SWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFKHLY 432 (433)
Q Consensus 364 --~-~~~~g~~~~~~~~~~~-~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~~~l 432 (433)
. ...+-+.+.+++...+ +..++.++. ++|+...-|. .-.+.+|+++++ +.++++.+++-|+.+.
T Consensus 292 ~v~~~~RS~mnV~f~~~~~~ld~~fv~eae-~~gl~~lkGh----r~vgGmRasiynA~~~e~veaL~~fm~~f~ 361 (365)
T COG1932 292 LVAKANRSRMNVTFTLVDAELDKGFVAEAE-AAGLIYLKGH----RSVGGLRASIYNAVPLEDVEALTDFMDWFE 361 (365)
T ss_pred ccchhhccceeEEEEcCcHHHHHHHHHHHH-HcCCceeccc----cCCCceeeeeecCCCHHHHHHHHHHHHHHH
Confidence 1 2234567778877433 344555544 4577776662 123449999765 7899999998887753
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.41 E-value=0.00019 Score=65.22 Aligned_cols=329 Identities=15% Similarity=0.157 Sum_probs=181.5
Q ss_pred eEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHH-H
Q 045431 65 VISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRL-Q 143 (433)
Q Consensus 65 ~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l-~ 143 (433)
.|||-+-...-......|.++..-- ..|+-+.+...|..++.+.+ |. +.++.|.-+..|-+++ .
T Consensus 48 ~IDLLTDSGTgams~~qwaamm~GD---------EAYagsrs~~~L~~avkdif----Gf--q~~iPthQGRgAE~Il~~ 112 (471)
T COG3033 48 FIDLLTDSGTGAMTDKQWAAMMRGD---------EAYAGSRSYYALADAVKDIF----GF--QYTIPTHQGRGAENILIP 112 (471)
T ss_pred EEEeeccCCcccccHHHHHHHhccc---------hhhcccccHHHHHHHHHHhc----Cc--eeeeeccCCccHHHHHHH
Confidence 4666433323345666666665532 35666778899999999987 54 5677776666665543 3
Q ss_pred Hhc-----CCCCEEEEeCCCChhhh-hhHHHhCCcccccccccccceEEEeecCcc----------CCcccC-CCC----
Q 045431 144 IVF-----GSNVTMAVQDPSYPAYV-DSSVIMGQTGEFQKDAEKYGKIEYMRCTAE----------NGFFPD-LST---- 202 (433)
Q Consensus 144 ~l~-----~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~---- 202 (433)
.++ .||.+.++++..|.-.. ...+..|. .+.-++.+.. ++++.+ +++
T Consensus 113 i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~------------~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lide 180 (471)
T COG3033 113 ILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGA------------TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDE 180 (471)
T ss_pred HHhhhccccCCccccccccceecchhHHHHhcCC------------ccccccccccccccccCCCCCccCHHHHHHHHHH
Confidence 333 45555566667665433 33334442 2222222211 111111 111
Q ss_pred --CCCccEEEEc-CCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccc-c---cccCCC----CCcccccCC----CCc
Q 045431 203 --VARTDIIFFC-SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYA-L---YISDDN----PRSIFEIPG----AKE 267 (433)
Q Consensus 203 --~~~~~~i~l~-~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~-~---~~~~~~----~~~~~~~~~----~~~ 267 (433)
..++-.|+++ +.|.-.|+..|.+.++++.++|++|+++++.|.+-. + |.-... ..++.++.. ..|
T Consensus 181 vG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD 260 (471)
T COG3033 181 VGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD 260 (471)
T ss_pred hCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh
Confidence 1456677776 556678999999999999999999999999998732 2 221111 123332210 011
Q ss_pred ceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHH-----hhccCCCcHHHHHHHHHhcCcCC-hhHHHHH
Q 045431 268 VAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIV-----CTCFNGASNISQAGGLACLSPEG-FKAVHEV 341 (433)
Q Consensus 268 ~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~ 341 (433)
-..-|.-|.- +..+ -|+++..++-.++ +-....... ..+..+.+.-...+.+.-|.+.. ..|+..+
T Consensus 261 --~~~mS~KKD~-lvnm-GGfl~~~D~~~fD----vy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~R 332 (471)
T COG3033 261 --GCTMSAKKDG-LVNM-GGFLCFKDDSFFD----VYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHR 332 (471)
T ss_pred --hheeeccccc-eecc-ccEEEecCccHHH----HHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHH
Confidence 1122555632 2221 1678877763210 011111111 01112223333333333333222 2344444
Q ss_pred HHHHHHHHHHHHHHHhhcCCeeecCCCccEEEEECC----C-----CChHHHHHHHHHcCCeEecCCCCCCC--C-----
Q 045431 342 IGFYKENTDIIVETFNSLGFKVYGGKNAPYVWVQFP----G-----RSSWDVFSEILEKTHVVTTPGSGFGP--G----- 405 (433)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~g~~~~~~~~g~~~~~~~~----~-----~~~~~~~~~l~~~~gi~v~~g~~f~~--~----- 405 (433)
. ..-++|.+.|++.|+.++.|.+|.-++++.. + ..+..+..+|-++.||...--..|.. +
T Consensus 333 v----~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~ 408 (471)
T COG3033 333 V----AQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGK 408 (471)
T ss_pred H----HHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccc
Confidence 4 3346788899999999998889888888753 2 24556788888888998755444421 1
Q ss_pred ----CCCeEEEeec---cChhHHHHHHHHHHHhh
Q 045431 406 ----GEGFIRVSAF---GHRGNVLEACKRFKHLY 432 (433)
Q Consensus 406 ----~~~~iRi~~~---~~~~~l~~~l~~l~~~l 432 (433)
.-..+|+++- -+.+.++-.++.++++.
T Consensus 409 q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~ 442 (471)
T COG3033 409 QHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALK 442 (471)
T ss_pred cCCCchheeeEeccccccchhHHHHHHHHHHHHH
Confidence 1246999962 26777777777776653
No 385
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.40 E-value=6.2e-05 Score=70.73 Aligned_cols=294 Identities=13% Similarity=0.110 Sum_probs=165.1
Q ss_pred hHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcE-EEcCChHHHHHH-HHHh---c-C-CC-
Q 045431 78 PEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDI-FVSDGAKCDISR-LQIV---F-G-SN- 149 (433)
Q Consensus 78 ~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i-~~~~G~~~al~~-l~~l---~-~-~g- 149 (433)
++...+-+.+.+.+. +.....-| ++..++..+..+++++.++.+++.+ ..|+|+++++.+ .... . . .|
T Consensus 93 ~~~~~~l~~~~~~k~-N~l~~d~f---p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I 168 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKF-NPLHPDEF---PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGI 168 (491)
T ss_pred CcchhhHHHHHHhhc-CccCcccc---chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCC
Confidence 344444455555432 11222233 4778888888888877555554433 467888888443 2111 1 1 23
Q ss_pred --CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC-----CCCccEEEEcCCCCccccCC
Q 045431 150 --VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST-----VARTDIIFFCSPNNPTGAAA 222 (433)
Q Consensus 150 --d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~p~nPtG~~~ 222 (433)
..++.+...+..+....+.++ ..+..+++++ +.+..|+.+ .+++.+++-+-|+.|+|.
T Consensus 169 ~~p~iv~~~~v~~a~eK~a~yf~------------v~l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~-- 233 (491)
T KOG1383|consen 169 DKPNIVTPQNVHAAFEKAARYFE------------VELREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGE-- 233 (491)
T ss_pred CCccccchHHHHHHHHHHHhhEE------------EEEEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccc--
Confidence 456667667666666666666 4788888875 466666543 368888888899999998
Q ss_pred CHHHHHHHHHHHHH-cCCEEEEeccccccccC-CC-CCcccccCCCCcceEEEecccc-cccccccceeeeecccccccc
Q 045431 223 TREQLTRLVQFAKD-NGSIIVYDSAYALYISD-DN-PRSIFEIPGAKEVAIETSSFSK-YAGFTGVRLGWTVIPKELLFS 298 (433)
Q Consensus 223 ~~~~~~~i~~~a~~-~~~~li~De~~~~~~~~-~~-~~~~~~~~~~~~~vi~i~S~sK-~~~~~G~r~G~l~~~~~~~~~ 298 (433)
.+.+++|.++..+ +++++.+|.+-+.|... +. +..-+.+. .+...-.-.+.+| .+.++| +||++=+..-+..
T Consensus 234 -~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr-~p~V~Sisa~~HKYGl~~~G--~~~vl~r~k~~~~ 309 (491)
T KOG1383|consen 234 -IEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFR-VPGVTSISADGHKYGLAPAG--SSWVLYRNKELLP 309 (491)
T ss_pred -hhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccC-CCCceeEeeccceeeeeecC--cEEEEEccccccc
Confidence 5678999999988 99999999999987653 21 11111221 1111111123456 333445 7887755444311
Q ss_pred CCcchhHHHH-HHHhhcc-----CCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccE
Q 045431 299 DGFPVAKDFN-RIVCTCF-----NGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPY 371 (433)
Q Consensus 299 ~~~~~~~~~~-~~~~~~~-----~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~ 371 (433)
+-..+..+|. ....+.+ .+.....|. +.+...+++...+..+.+-+....+++.+++. ++.+.....--+
T Consensus 310 ~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~w---a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~ 386 (491)
T KOG1383|consen 310 HQLFFHTDWLGGIYASPTLNGSRPGSQVAAQW---AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSF 386 (491)
T ss_pred ceEEEeccccCccccCcccccCCcccHHHHHH---HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEE
Confidence 1111111111 1111111 112222222 22223445555777777888999999999987 777766533333
Q ss_pred EEEECCCCChHHHHHHHHHcCCeEecC
Q 045431 372 VWVQFPGRSSWDVFSEILEKTHVVTTP 398 (433)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~gi~v~~ 398 (433)
+...-...+..++-. ++.+.|..+..
T Consensus 387 ~~~~s~~~~i~elsd-~l~~~GW~lna 412 (491)
T KOG1383|consen 387 ILFGSNDVNIFELSD-LLRKKGWILNA 412 (491)
T ss_pred EEccCCccchhhhhH-HHHhcCcCccc
Confidence 333333334444444 45566888854
No 386
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.38 E-value=0.00012 Score=73.64 Aligned_cols=269 Identities=13% Similarity=0.027 Sum_probs=146.2
Q ss_pred ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHH-HHHH---HHhc------
Q 045431 77 IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCD-ISRL---QIVF------ 146 (433)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~a-l~~l---~~l~------ 146 (433)
.++.++..+...+.+ .....|...++...+.+.+.+|+.+.+|.+...=.+|+|++.+ +..+ +...
T Consensus 95 ~~paila~~~a~~~N----~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~ 170 (608)
T TIGR03811 95 LMPAILAYNYAMLWN----GNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAM 170 (608)
T ss_pred CHHHHHHHHHHHHhC----CCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchh
Confidence 445555444443332 3334555667889999999999998666654333466676666 4433 2211
Q ss_pred CC-------------------------------------------C------CEEEEeCCCChhhhhhHHHhCCcccccc
Q 045431 147 GS-------------------------------------------N------VTMAVQDPSYPAYVDSSVIMGQTGEFQK 177 (433)
Q Consensus 147 ~~-------------------------------------------g------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~ 177 (433)
+. | .+|++++-.|.+...++..+|.-.
T Consensus 171 ~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~---- 246 (608)
T TIGR03811 171 KEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGL---- 246 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCc----
Confidence 00 0 157778888999888888888421
Q ss_pred cccccceEEEeecCccCCcccC-CCC-------CC-CccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCC--EEEEecc
Q 045431 178 DAEKYGKIEYMRCTAENGFFPD-LST-------VA-RTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGS--IIVYDSA 246 (433)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~-~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~--~li~De~ 246 (433)
-.++.+|++.+...+.+ +++ .. .+-+|+-+-....+|.+=+.+++.+|++.++++|+ ++.+|.+
T Consensus 247 -----~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAA 321 (608)
T TIGR03811 247 -----DQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAA 321 (608)
T ss_pred -----ccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecc
Confidence 25888998765444333 211 11 23345555668889997775555555555578998 6999999
Q ss_pred ccccc---cCC-C--CCccc-------------------------ccCCCCcceEEEecccccccccccceeeeeccccc
Q 045431 247 YALYI---SDD-N--PRSIF-------------------------EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKEL 295 (433)
Q Consensus 247 ~~~~~---~~~-~--~~~~~-------------------------~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~ 295 (433)
|+++. +-+ . +.++. .+.+...-.-+.-.++|++. ....+|.++.++..
T Consensus 322 yGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~ 400 (608)
T TIGR03811 322 YGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIR 400 (608)
T ss_pred ccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHH
Confidence 99753 111 0 01100 11111111122347899985 77778988887654
Q ss_pred cccCCcchhHHHHHHHh-------hccCCCcHHH--HHHHHHhcCcC--ChhHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 296 LFSDGFPVAKDFNRIVC-------TCFNGASNIS--QAGGLACLSPE--GFKAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 296 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~--q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+.......-+..... ......+.+. ..++...++.. +.+.+.++..+.-+.++++.+.|++.
T Consensus 401 ~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 401 MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 31100000000000000 0011122222 11122222222 34566788888888888888888774
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.37 E-value=3.5e-05 Score=71.83 Aligned_cols=279 Identities=13% Similarity=0.036 Sum_probs=137.3
Q ss_pred CCcEEEcCChHHH-HHHHHHhc---CCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcc-cCC
Q 045431 126 EGDIFVSDGAKCD-ISRLQIVF---GSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFF-PDL 200 (433)
Q Consensus 126 ~~~i~~~~G~~~a-l~~l~~l~---~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 200 (433)
....++++.+|.. +.+.+..+ ..++.|+.+.-.+..-.-+...+| .+++.++...+++.. .++
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AG------------l~~~vV~~~~~~d~l~td~ 141 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAG------------LEPVVVENVLEGDELITDL 141 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-------------EEEEE-EEEETTEEEEHH
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcC------------CeEEEeeccCCCCeeeccH
Confidence 4567888887765 33432222 467899999888877677777788 456666543332221 111
Q ss_pred C-------C-CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcc---cccCCCCcce
Q 045431 201 S-------T-VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSI---FEIPGAKEVA 269 (433)
Q Consensus 201 ~-------~-~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~---~~~~~~~~~v 269 (433)
+ + .++..+.++++++.--+.. .+++++|+++|++||++.|+..+|+- .....-..+ ..... -.
T Consensus 142 ~~ie~~i~~~G~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgv-Q~~~~~~~i~~a~~~GR---vd 215 (389)
T PF05889_consen 142 EAIEAKIEELGADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGV-QSSKCMHLIQQAWRVGR---VD 215 (389)
T ss_dssp HHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT-T-HHHHHHHHHHHHHST---CS
T ss_pred HHHHHHHHHhCCCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhh-hHHHHHHHHHHHHhcCC---cc
Confidence 1 1 1344556666554333333 34699999999999999999999993 100000000 01111 12
Q ss_pred EEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHH
Q 045431 270 IETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENT 349 (433)
Q Consensus 270 i~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 349 (433)
+++.|..|.| +-+..-+.+.++.+.. ...+...........+.+.. ...++. -+...+........+..
T Consensus 216 a~vqS~dkNF-~VPvGgai~As~~~~~-------i~~vs~~YpGRas~sp~ld~--~itLl~-LG~~g~~~ll~~r~~~f 284 (389)
T PF05889_consen 216 AFVQSTDKNF-MVPVGGAIMASFDPSG-------ILAVSKEYPGRASASPSLDL--FITLLS-LGCTGYGALLKERKASF 284 (389)
T ss_dssp EEEEEHHHHH-CEESSHEEEEESSHHH-------HHHHHHTSHSHBTSHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCE-EecCCCcEEEecCHHH-------HHHHHHHhhhhhhcccchHH--HHHHHH-HhhhHHHHHHHHHHHHH
Confidence 7788888988 5654444555554432 23444333332232333333 333332 12222333334444444
Q ss_pred HHHHHHHhh----cCCeeec-CCCccEEEEECCCC-----ChHHHHHHHHHcCCeE----ecCCCCCC-----CCCCCeE
Q 045431 350 DIIVETFNS----LGFKVYG-GKNAPYVWVQFPGR-----SSWDVFSEILEKTHVV----TTPGSGFG-----PGGEGFI 410 (433)
Q Consensus 350 ~~l~~~l~~----~g~~~~~-~~~g~~~~~~~~~~-----~~~~~~~~l~~~~gi~----v~~g~~f~-----~~~~~~i 410 (433)
.++.+.|++ .+-.+.. |..-..+.+.++.. ....++-..|...||. +.|+..+. .....++
T Consensus 285 ~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Yl 364 (389)
T PF05889_consen 285 PYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYL 364 (389)
T ss_dssp HHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEE
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHH
Confidence 444444433 3433322 33444455666522 1223444444444653 33333221 1123678
Q ss_pred EEe--eccChhHHHHHHHHHHHhhC
Q 045431 411 RVS--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 411 Ri~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
-++ +..+.+|++..+++|+++++
T Consensus 365 t~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 365 TAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 784 45699999999999999874
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.34 E-value=7.5e-07 Score=82.10 Aligned_cols=253 Identities=16% Similarity=0.168 Sum_probs=49.2
Q ss_pred CChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHH-HHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEE
Q 045431 76 PIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAA-IASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAV 154 (433)
Q Consensus 76 ~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~-la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~ 154 (433)
+.++.+++++.+....+.+. .|.-..|...-|.. +.+.+++-. ..+.-+++++..+|+.++...+.+|.+|++
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nL----E~dl~~G~Rg~R~~~v~~ll~~lt--gAeaA~VvNnnaAAv~L~l~~la~~~EvIv 90 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNL----EYDLETGKRGSRYAHVEELLCELT--GAEAALVVNNNAAAVLLALNTLAKGKEVIV 90 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc----cccccccccccccccccccccccc--cccccccccccccccccccccccccccccc
Confidence 46788888888877655432 33222222222221 122222112 345677888888888775444445666766
Q ss_pred eCCC---Chh---hhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC--CCCccEEEEcCCCCcc--ccCCCH
Q 045431 155 QDPS---YPA---YVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST--VARTDIIFFCSPNNPT--GAAATR 224 (433)
Q Consensus 155 ~~p~---~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~p~nPt--G~~~~~ 224 (433)
..-. +.+ +.++.+..|. .++.+.... .....|++. .+++.+++..+++|-. |..-+
T Consensus 91 sRGelVeiGgsFRip~vm~~sGa------------~lvEVGttN-~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~- 156 (367)
T PF03841_consen 91 SRGELVEIGGSFRIPDVMRQSGA------------RLVEVGTTN-RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE- 156 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc------------ccccccccc-cccccccccccccccccccccccccccccccccc-
Confidence 4322 222 3345555552 444444422 122334443 4788888878887753 33222
Q ss_pred HHHHHHHHHHHHcCCEEEEecccccccc---CC--CCCcccccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYALYIS---DD--NPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~~~~---~~--~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
-.++++++++++|++++|+|-.-+.+.. -+ .-+.+..+-. .+-.+++.|-.|.+| |...|.+++.++++
T Consensus 157 ~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI--- 230 (367)
T PF03841_consen 157 VSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVGKKELI--- 230 (367)
T ss_dssp ----HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCC-CT-SEEEEETTSSSS--S-S-EEEEEEHHHH---
T ss_pred ccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEeCHHHH---
Confidence 2489999999999999999987643221 01 1122333211 223488889999985 66789999999997
Q ss_pred CcchhHHHHHHHhhccCCCcHHHHHHHHHhcC---cCCh--------hHHHHHHHHHHHHHHHHHHHHhhc
Q 045431 300 GFPVAKDFNRIVCTCFNGASNISQAGGLACLS---PEGF--------KAVHEVIGFYKENTDIIVETFNSL 359 (433)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~--------~~~~~~~~~~~~~~~~l~~~l~~~ 359 (433)
+.+++..-...........++..+.|+ +... +.+....+.++++.+.+.+.|+..
T Consensus 231 -----~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 231 -----EKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp -----HHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred -----HHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 555544433334445555444443333 2111 224444556666777777766654
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.13 E-value=0.00017 Score=65.31 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=115.3
Q ss_pred ccEEEEcCC-CCccc-cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcccccCCCCcceEEEecccccccc
Q 045431 206 TDIIFFCSP-NNPTG-AAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN--PRSIFEIPGAKEVAIETSSFSKYAGF 281 (433)
Q Consensus 206 ~~~i~l~~p-~nPtG-~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~vi~i~S~sK~~~~ 281 (433)
+-+-++..| +.--| .--|++..++|.+++++|++.+|+||++.+....|. ......++..+| ++ +|||-+ .
T Consensus 271 pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD-~v---TFSKK~-q 345 (484)
T KOG1405|consen 271 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD-VV---TFSKKF-Q 345 (484)
T ss_pred CeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc-ce---ehhhhh-h
Confidence 444555677 54444 455899999999999999999999999987555554 122334443333 34 899988 4
Q ss_pred cccceeeeeccccccccCCcchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhcC-
Q 045431 282 TGVRLGWTVIPKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSLG- 360 (433)
Q Consensus 282 ~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g- 360 (433)
.| ||-. .++++- -+.++.+ .++...+.-...+.+.++.... +.+....+.--+.+...|.++.
T Consensus 346 ~g---Gffh-~~~frp------n~pYrif---NTWmGdP~k~lll~~vv~~I~~---~~Ll~n~~~vG~~l~~gL~~Lq~ 409 (484)
T KOG1405|consen 346 TG---GFFH-DEEFRP------NEPYRIF---NTWMGDPSKNLLLEEVVQEIKR---EDLLNNVAHVGKALLKGLLELQA 409 (484)
T ss_pred cC---cccc-CcccCC------CchHHHh---hhhcCChHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 6543 333320 1222221 1221122211112222221111 3444445555566666665541
Q ss_pred -----CeeecCCCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEe--eccChhHHHHHHHHHHHhhC
Q 045431 361 -----FKVYGGKNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVS--AFGHRGNVLEACKRFKHLYK 433 (433)
Q Consensus 361 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~--~~~~~~~l~~~l~~l~~~l~ 433 (433)
+.-... .|.|+.+++|.....+.+...++-+||.+-. | +...||+- +.-.+...+-.++++.+++.
T Consensus 410 ~~p~~~~~~RG-rGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG---C---g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 410 KYPGKINNLRG-RGTFIAWDCPSGSIRDKLILIARLNGVNLGG---C---GDKSIRFRPSLVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred hCchhhhcccc-cceEEEEeCCChHHHHHHHHHHHHcCceecc---c---ccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence 222333 6788889998655556666666777988732 2 24457776 44477788888888887763
No 390
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=98.12 E-value=4.8e-07 Score=62.79 Aligned_cols=37 Identities=16% Similarity=0.006 Sum_probs=29.8
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~ 38 (433)
++++++|.+|.+++|++|||+++||+.++||++|+..
T Consensus 7 ~~l~~~I~~g~~~~g~~lps~~~la~~~~vsr~tvr~ 43 (64)
T PF00392_consen 7 DQLRQAILSGRLPPGDRLPSERELAERYGVSRTTVRE 43 (64)
T ss_dssp HHHHHHHHTTSS-TTSBE--HHHHHHHHTS-HHHHHH
T ss_pred HHHHHHHHcCCCCCCCEeCCHHHHHHHhccCCcHHHH
Confidence 4678999999999999999999999999999999643
No 391
>COG2186 FadR Transcriptional regulators [Transcription]
Probab=97.96 E-value=2.1e-06 Score=76.78 Aligned_cols=47 Identities=19% Similarity=0.101 Sum_probs=38.2
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccc---cccCC-CCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGN---LGKLQ-AGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~---~~~l~-~g~~~~~ 48 (433)
++|.+.|.+|.++||++||++|+||+++||||+++ +..|. .|++...
T Consensus 17 ~~i~~~I~~g~~~~G~~LP~EreLae~fgVSR~~vREAl~~L~a~Glve~r 67 (241)
T COG2186 17 EQIGALIVSGELPPGDRLPSERELAERFGVSRTVVREALKRLEAKGLVEIR 67 (241)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHCCCcHHHHHHHHHHHHCCCeeec
Confidence 46889999999999999999999999999999995 33333 3665554
No 392
>COG2188 PhnF Transcriptional regulators [Transcription]
Probab=97.90 E-value=1e-06 Score=78.65 Aligned_cols=47 Identities=17% Similarity=0.111 Sum_probs=39.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccccC---C-CCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKL---Q-AGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~l---~-~g~~~~~ 48 (433)
++|+++|.+|.+++|++|||+++||++++|||-|+-+++ . +|++...
T Consensus 14 ~~i~~~I~~G~~~~G~~LPsE~eLa~~f~VSR~TvRkAL~~L~~eGli~r~ 64 (236)
T COG2188 14 EDIRQRIESGELPPGDKLPSERELAEQFGVSRMTVRKALDELVEEGLIVRR 64 (236)
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHHHHHCCcHHHHHHHHHHHHHCCcEEEE
Confidence 578999999999999999999999999999999964433 2 3665543
No 393
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.89 E-value=0.0019 Score=57.68 Aligned_cols=336 Identities=14% Similarity=0.145 Sum_probs=178.1
Q ss_pred CCCceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCC-------CCCCHHHHHHHHHHHhccCCCCCCcEEEcC
Q 045431 61 PDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGA-------EQGEKPLRAAIASTFYKDLGIEEGDIFVSD 133 (433)
Q Consensus 61 ~~~~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~-------~~g~~~lr~~la~~l~~~~~~~~~~i~~~~ 133 (433)
++.+.|-|..+... ..|..+...+.+.+.++. ...-|++ ..+....-.-++.. .|+..++|.+.+
T Consensus 64 ~d~~~iYlcGNSLG-LmPK~t~~~~~~eLDkWa---k~av~gH~~GkvPW~~~De~il~l~~~i----VGA~e~EvavmN 135 (465)
T KOG3846|consen 64 DDKPVIYLCGNSLG-LMPKSTRNSINAELDKWA---KCAVEGHFKGKVPWVSIDEPILPLLAPI----VGAQENEVAVMN 135 (465)
T ss_pred CCCCeEEEeccccc-cCchhhHhHHHHHHHHHH---hhhhhcccccccceeecchhhhhhhhhh----ccCCchhhhhHh
Confidence 34456777665543 367777777777665542 2222322 23344444444444 488889999999
Q ss_pred ChHHHHHH-HHHhcCCC---CEEEEeCCCChhhhhhH----HHhCCcccccccccccceEEEeecCccCCccc---C---
Q 045431 134 GAKCDISR-LQIVFGSN---VTMAVQDPSYPAYVDSS----VIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP---D--- 199 (433)
Q Consensus 134 G~~~al~~-l~~l~~~g---d~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 199 (433)
+-+..+.. +.++.+|. -+|+++.-.|++-..++ +..|+... -..+.+... ++.-.. |
T Consensus 136 sLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e--------~sm~~iePR-EGEetlRteDILd 206 (465)
T KOG3846|consen 136 SLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPE--------NSMIQIEPR-EGEETLRTEDILD 206 (465)
T ss_pred hhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChH--------HheEEeccc-ccccchhHHHHHH
Confidence 99999886 57777776 46899988887754444 44443211 012222211 111111 1
Q ss_pred -CCCC-CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccc
Q 045431 200 -LSTV-ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSK 277 (433)
Q Consensus 200 -~~~~-~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK 277 (433)
+++. ..+.+|+++-.|+-||+.++ +.+|-..-+..|+++=.|-+|+-. .-|..+-. ++..+-+.+--|
T Consensus 207 ~IEkngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAvg---NVpL~LHd----WgVDFACWCSYK 276 (465)
T KOG3846|consen 207 TIEKNGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAVG---NVPLQLHD----WGVDFACWCSYK 276 (465)
T ss_pred HHHhcCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhhc---CCceEEee----cCCceEEEeeec
Confidence 2222 34566677778999999998 777776667789999999988832 11222211 333466777677
Q ss_pred ccccccc-ceeeeeccccccccCCcchhHHHH-----H------------HHhhccCCCcHHHHHHHHHhcCcCChhHHH
Q 045431 278 YAGFTGV-RLGWTVIPKELLFSDGFPVAKDFN-----R------------IVCTCFNGASNISQAGGLACLSPEGFKAVH 339 (433)
Q Consensus 278 ~~~~~G~-r~G~l~~~~~~~~~~~~~~~~~~~-----~------------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 339 (433)
.+. +|- .+|-+.+.........+++...|. + ......+.++.+.-.+....|+--....++
T Consensus 277 Yln-aGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~ 355 (465)
T KOG3846|consen 277 YLN-AGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNIN 355 (465)
T ss_pred ccc-cCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHH
Confidence 664 432 355555554443222222222110 0 000111122222222222222211111133
Q ss_pred HHHHHHHHHHHHHHHHHhhc-C-----------CeeecC----CCccEEEEECCCCChHHHHHHHHHcCCeEecCCCCCC
Q 045431 340 EVIGFYKENTDIIVETFNSL-G-----------FKVYGG----KNAPYVWVQFPGRSSWDVFSEILEKTHVVTTPGSGFG 403 (433)
Q Consensus 340 ~~~~~~~~~~~~l~~~l~~~-g-----------~~~~~~----~~g~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~ 403 (433)
+++++---...++...++.. | +.+..| +.|..+.+.+.. +...++++|-++ |+.+-
T Consensus 356 ~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-p~~~vfqeL~kr-Gv~~D------ 427 (465)
T KOG3846|consen 356 ELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-PTPKVFQELHKR-GVIGD------ 427 (465)
T ss_pred HHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-CchHHHHHHHHc-Ceecc------
Confidence 33332222222222222221 2 223333 235556666653 235677777655 98773
Q ss_pred CCCCCeEEEe---eccChhHHHHHHHHHHHhh
Q 045431 404 PGGEGFIRVS---AFGHRGNVLEACKRFKHLY 432 (433)
Q Consensus 404 ~~~~~~iRi~---~~~~~~~l~~~l~~l~~~l 432 (433)
...++.||++ ++++-.++..++..|.+++
T Consensus 428 kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~ 459 (465)
T KOG3846|consen 428 KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAM 459 (465)
T ss_pred ccCCCceEeecchhhccHHHHHHHHHHHHHHH
Confidence 3457889999 5889999999998888765
No 394
>PRK14999 histidine utilization repressor; Provisional
Probab=97.89 E-value=1.1e-06 Score=79.00 Aligned_cols=49 Identities=16% Similarity=0.049 Sum_probs=40.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccccc---C-CCCCCcHHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGK---L-QAGYLFPEIA 50 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~---l-~~g~~~~~~~ 50 (433)
..|+++|.+|.++||++|||+|+||+++||||+|+-++ | .+|++....+
T Consensus 19 ~~i~~~I~~g~~~~G~~LPsE~eLa~~~gVSR~TVR~Al~~L~~eGli~r~~G 71 (241)
T PRK14999 19 QDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWLVRLQG 71 (241)
T ss_pred HHHHHHHHcCCCCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 35789999999999999999999999999999996443 3 2477765433
No 395
>TIGR02325 C_P_lyase_phnF phosphonates metabolism transcriptional regulator PhnF. All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond.
Probab=97.88 E-value=1.1e-06 Score=78.94 Aligned_cols=49 Identities=18% Similarity=0.062 Sum_probs=40.2
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccccc---CC-CCCCcHHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGK---LQ-AGYLFPEIA 50 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~---l~-~g~~~~~~~ 50 (433)
+.+++.|.+|.+++|++|||+|+||++++|||.|+-++ |. +|++....+
T Consensus 15 ~~l~~~I~~g~~~~G~~LPsE~eLa~~~~VSR~TvR~Al~~L~~eGli~r~~G 67 (238)
T TIGR02325 15 DKIEQEIAAGHLRAGDYLPAEMQLAERFGVNRHTVRRAIAALVERGLLRAEQG 67 (238)
T ss_pred HHHHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 45789999999999999999999999999999996443 32 477776533
No 396
>TIGR02404 trehalos_R_Bsub trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli.
Probab=97.85 E-value=1.4e-06 Score=77.93 Aligned_cols=49 Identities=18% Similarity=0.084 Sum_probs=40.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc---cC-CCCCCcHHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG---KL-QAGYLFPEIA 50 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~---~l-~~g~~~~~~~ 50 (433)
..|++.|.+|.++||++|||+++||+++||||.|+-+ .| .+|++....+
T Consensus 7 ~~l~~~I~~g~~~~G~~LPsE~eLa~~~gVSR~TVR~Al~~L~~eGli~r~~G 59 (233)
T TIGR02404 7 QDLEQKITHGQYKEGDYLPSEHELMDQYGASRETVRKALNLLTEAGYIQKIQG 59 (233)
T ss_pred HHHHHHHHhCCCCCCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeCC
Confidence 3578899999999999999999999999999999644 33 2477766433
No 397
>TIGR02018 his_ut_repres histidine utilization repressor, proteobacterial. This model represents a proteobacterial histidine utilization repressor. It is usually found clustered with the enzymes HutUHIG so that it can regulate its own expression as well. A number of species have several paralogs and may fine-tune the regulation according to levels of degradation intermediates such as urocanate. This family belongs to the larger GntR family of transcriptional regulators.
Probab=97.82 E-value=1.6e-06 Score=77.39 Aligned_cols=49 Identities=18% Similarity=0.070 Sum_probs=40.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccccc---C-CCCCCcHHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGK---L-QAGYLFPEIA 50 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~---l-~~g~~~~~~~ 50 (433)
+.++++|.+|.++||++|||+++||++++|||.|+-++ | .+|++....+
T Consensus 8 ~~l~~~I~~g~~~~g~~LPsE~eLa~~~~VSR~TVR~Al~~L~~eGli~r~~G 60 (230)
T TIGR02018 8 QDILERIRSGEWPPGHRIPSEHELVAQYGCSRMTVNRALRELTDAGLLERRQG 60 (230)
T ss_pred HHHHHHHHhCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 35788999999999999999999999999999996443 3 2477666433
No 398
>PRK09764 DNA-binding transcriptional repressor MngR; Provisional
Probab=97.80 E-value=2e-06 Score=77.24 Aligned_cols=49 Identities=20% Similarity=0.033 Sum_probs=40.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccccc---C-CCCCCcHHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGK---L-QAGYLFPEIA 50 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~---l-~~g~~~~~~~ 50 (433)
+.|+..|.+|.++||+||||+++||+++||||.|+-++ | .+|++....+
T Consensus 12 ~~L~~~I~~g~~~~G~~LPsE~eL~~~~~VSR~TvR~Al~~L~~eGli~r~~G 64 (240)
T PRK09764 12 DRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQG 64 (240)
T ss_pred HHHHHHHHcCCCCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 45788999999999999999999999999999996443 3 2477665433
No 399
>PRK11402 DNA-binding transcriptional regulator FrlR; Provisional
Probab=97.79 E-value=2e-06 Score=77.29 Aligned_cols=47 Identities=19% Similarity=0.068 Sum_probs=39.3
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccccc---C-CCCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGK---L-QAGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~---l-~~g~~~~~ 48 (433)
.+|++.|.+|.+++|+||||+++||++++|||.|+-++ | .+|++...
T Consensus 16 ~~i~~~I~~G~~~~g~kLPsE~eLa~~~~VSR~TvR~Al~~L~~eGli~r~ 66 (241)
T PRK11402 16 QRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRW 66 (241)
T ss_pred HHHHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEe
Confidence 36788999999999999999999999999999996443 3 24777754
No 400
>PRK04984 fatty acid metabolism regulator; Provisional
Probab=97.76 E-value=6.4e-06 Score=74.02 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=38.4
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc---cCC-CCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG---KLQ-AGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~---~l~-~g~~~~~ 48 (433)
++|++.|.+|.|+||++|||+|+||+++||||+|+-. .|. .|++...
T Consensus 14 ~~l~~~I~~g~l~pG~~LPsE~eLae~~gVSRt~VReAL~~L~~eGlv~~~ 64 (239)
T PRK04984 14 EYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQ 64 (239)
T ss_pred HHHHHHHHcCCCCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEe
Confidence 4688999999999999999999999999999999643 332 3555543
No 401
>PRK09990 DNA-binding transcriptional regulator GlcC; Provisional
Probab=97.68 E-value=1e-05 Score=73.26 Aligned_cols=47 Identities=17% Similarity=0.048 Sum_probs=38.3
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc---cCC-CCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG---KLQ-AGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~---~l~-~g~~~~~ 48 (433)
++|+..|.+|+|+||++|||+++||+++||||+|+-. .|. .|++...
T Consensus 14 ~~i~~~I~~g~l~pG~~LPsE~eLa~~~gVSRtpVREAL~~L~~eGlV~~~ 64 (251)
T PRK09990 14 ERIERLIVDGVLKVGQALPSERRLCEKLGFSRSALREGLTVLRGRGIIETA 64 (251)
T ss_pred HHHHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEe
Confidence 5689999999999999999999999999999999643 332 3555543
No 402
>TIGR02812 fadR_gamma fatty acid metabolism transcriptional regulator FadR. Members of this family are FadR, a transcriptional regulator of fatty acid metabolism, including both biosynthesis and beta-oxidation. It is found exclusively in a subset of Gammaproteobacteria, with strictly one copy per genome. It has an N-terminal DNA-binding domain and a less well conserved C-terminal long chain acyl-CoA-binding domain. FadR from this family heterologously expressed in Escherichia coli show differences in regulatory response and fatty acid binding profiles. The family is nevertheless designated equivalog, as all member proteins have at least nominally the same function.
Probab=97.68 E-value=1e-05 Score=72.45 Aligned_cols=36 Identities=11% Similarity=-0.058 Sum_probs=33.7
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~ 37 (433)
++++++|.+|.|+||++|||+++||++|||||+|+-
T Consensus 13 ~~l~~~I~~g~l~pG~~LpsE~~La~~lgVSRtpVR 48 (235)
T TIGR02812 13 EYIVESIWNNRFPPGSILPAERELSELIGVTRTTLR 48 (235)
T ss_pred HHHHHHHHcCCCCCCCcCcCHHHHHHHHCcCHHHHH
Confidence 468999999999999999999999999999999963
No 403
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0067 Score=57.35 Aligned_cols=308 Identities=14% Similarity=0.136 Sum_probs=156.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccCCCC----------CCcEEEcCChHHHHHH-HHH---h---cCCC-----------C
Q 045431 99 SGYGAEQGEKPLRAAIASTFYKDLGIE----------EGDIFVSDGAKCDISR-LQI---V---FGSN-----------V 150 (433)
Q Consensus 99 ~~Y~~~~g~~~lr~~la~~l~~~~~~~----------~~~i~~~~G~~~al~~-l~~---l---~~~g-----------d 150 (433)
+.+...+-..+|..-+.+||.+-++.+ .--|+.++.+.+.+-. +.+ . ++.+ +
T Consensus 103 FtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~ 182 (511)
T KOG0628|consen 103 FTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLAR 182 (511)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhh
Confidence 455566788999999999997633332 2345555554444433 211 1 2222 2
Q ss_pred EE-EEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CC----C---CCCccEEEEcCCCCccccC
Q 045431 151 TM-AVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LS----T---VARTDIIFFCSPNNPTGAA 221 (433)
Q Consensus 151 ~V-l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~---~~~~~~i~l~~p~nPtG~~ 221 (433)
-| ...+..+.++...+...+ .++..++.+.+-+...+ +. + ..-+-.++..+- .-||.
T Consensus 183 lV~Y~SDqahssveka~~i~~------------VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~- 248 (511)
T KOG0628|consen 183 LVAYCSDQAHSSVEKACLIAG------------VKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSS- 248 (511)
T ss_pred heEEecCcccchHHHhHhhcc------------eeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCccc-
Confidence 33 346667777777666666 46777777653333222 11 1 122333232222 22333
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccC-CCCCccc-ccCCCCcceEEEecccccccccccceeeeeccccccccC
Q 045431 222 ATREQLTRLVQFAKDNGSIIVYDSAYALYISD-DNPRSIF-EIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSD 299 (433)
Q Consensus 222 ~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~ 299 (433)
.+.+++.+|..+|+++|+++.+|.+|++..+- +....+. .++.. | -+-.-.||++ +.-+-+.-+...+..-...
T Consensus 249 ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~a-D--Sfn~n~hK~~-~vnfDCs~lWvkd~~~~~~ 324 (511)
T KOG0628|consen 249 CAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYA-D--SFNFNPHKWL-LVNFDCSPLWVKDGTKLSR 324 (511)
T ss_pred cccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhh-c--cccCChhhee-EEeeeeecceeecCceeee
Confidence 35678999999999999999999999964332 1111111 11100 1 1122347766 4666666555555421000
Q ss_pred CcchhHHHHHHHhh------ccCCCcHHHHH-HHHH---hcCcCChhHHHHHHHHHHH---HHHHHHHHHhhc-CCeeec
Q 045431 300 GFPVAKDFNRIVCT------CFNGASNISQA-GGLA---CLSPEGFKAVHEVIGFYKE---NTDIIVETFNSL-GFKVYG 365 (433)
Q Consensus 300 ~~~~~~~~~~~~~~------~~~~~~~~~q~-~~~~---~l~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~-g~~~~~ 365 (433)
...+.....+.... ..+..+ ++.. -++. .++.- ..+.+++++++ ..+.+.+.+.+- -+++..
T Consensus 325 ~~~vdp~yL~h~~~~~~~Dyrhwqip-l~rRfRSLKlWfv~R~~---Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~ 400 (511)
T KOG0628|consen 325 AFNVDPLYLKHAYQGSAPDYRHWQIP-LGRRFRSLKLWFVLRSY---GVENLQNYIREHVRLAKEFETLVRADPRFEIVN 400 (511)
T ss_pred eeecChHhhcchhhccCCCccccccc-cccchhhHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec
Confidence 00000000000000 000000 0000 0010 11111 12333333333 233333333332 467665
Q ss_pred CCCccEEEEECCC--CChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc---ChhHHHHHHHHHHHh
Q 045431 366 GKNAPYVWVQFPG--RSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG---HRGNVLEACKRFKHL 431 (433)
Q Consensus 366 ~~~g~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~~~l~~~l~~l~~~ 431 (433)
+.-=-.+++++.+ .....+.+++-....|.+.|... .+.-.+|++++. ++++++++.+.|.+.
T Consensus 401 ~~~lgLvcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l---~gk~vlRf~V~s~~t~~~di~~a~~~I~~~ 468 (511)
T KOG0628|consen 401 KRILGLVCFRLKGDNEINEALLNRLNSSGRIHLVPASL---HGKFVLRFAVCSPLTNESDIDEAWKIIFEA 468 (511)
T ss_pred ccccceeEEeecCCcHHHHHHHHHHHhcCcEEEEEeee---cceEEEEEEecCCCCcHHHHHHHHHHHHHH
Confidence 5443356677763 34567888887778899988653 345679999643 688999998888765
No 404
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.62 E-value=0.009 Score=58.78 Aligned_cols=319 Identities=16% Similarity=0.175 Sum_probs=165.4
Q ss_pred ecCCCCCCCChHHHHHHHHHHHhhcccCCCCCCCCCCC--CCHHHHHHHHHHH---hccCCCCCCcEEEcCChHHHHH-H
Q 045431 68 LGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQ--GEKPLRAAIASTF---YKDLGIEEGDIFVSDGAKCDIS-R 141 (433)
Q Consensus 68 l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~--g~~~lr~~la~~l---~~~~~~~~~~i~~~~G~~~al~-~ 141 (433)
.++|.+....|+.+.+-+.+ +..++.+|+|-+ -...-.+++-+|- ....|.+..|--+..-++++-. +
T Consensus 123 IGmGYyn~~vP~~I~RNile------np~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm 196 (1001)
T KOG2040|consen 123 IGMGYYNTHVPAVILRNILE------NPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAM 196 (1001)
T ss_pred hccccccccCcHHHHHHhhh------CCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHH
Confidence 36677766778877666555 236677776622 1111122333331 2223455444443333343333 3
Q ss_pred -HHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCcccc
Q 045431 142 -LQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGA 220 (433)
Q Consensus 142 -l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~ 220 (433)
+..-..++.+.++...+|+.....++.... + ..+...-.+.. ..+ ....++..+++..|.. -|.
T Consensus 197 ~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~-~---------~~i~v~~~~~~---~~~-~s~~~v~gvlvQYP~t-~G~ 261 (1001)
T KOG2040|consen 197 ALCNRINKRKKFVVDSNCHPQTLSVVKTRAK-G---------FGIKVVVSDIK---EAD-YSSKDVSGVLVQYPDT-EGS 261 (1001)
T ss_pred HHHHhhcccceEEecCCCCcchhhhhhcccc-c---------cceeEEecCHH---Hhh-ccccceeEEEEEcCCC-CCc
Confidence 233345666799999999988776653321 0 11211111111 001 1124566777666643 577
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEe-ccccccccCCCCCcccccCCCCcceEEEecccccccc----cccceeeeeccccc
Q 045431 221 AATREQLTRLVQFAKDNGSIIVYD-SAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGF----TGVRLGWTVIPKEL 295 (433)
Q Consensus 221 ~~~~~~~~~i~~~a~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~----~G~r~G~l~~~~~~ 295 (433)
+.+ ..++++.+++.+.+++.- |--+ ++ +...++..+-.|.+||. ..||. .|--.||..+.+.+
T Consensus 262 i~d---~~el~~~a~~~~s~vv~atDLLa-Lt-------iLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l 329 (1001)
T KOG2040|consen 262 VLD---FDELVELAHANGSLVVMATDLLA-LT-------ILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESL 329 (1001)
T ss_pred ccC---HHHHHHHhhccCceEEEeehhhH-HH-------ccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHH
Confidence 777 667777788888876642 2122 11 11111222334778873 33443 34445566666555
Q ss_pred ccc----------C---Cc-------chhHHHHHHHhhccCCCcHHHH--HHHHHhcCcCChhHHHHHHHHHHHHHHHHH
Q 045431 296 LFS----------D---GF-------PVAKDFNRIVCTCFNGASNISQ--AGGLACLSPEGFKAVHEVIGFYKENTDIIV 353 (433)
Q Consensus 296 ~~~----------~---~~-------~~~~~~~~~~~~~~~~~~~~~q--~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 353 (433)
... + .. .-.+.+++-+..+..++..... .++..++- .+-..++++.+++......+.
T Consensus 330 ~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiY-HGp~gL~~IArrvh~~T~~l~ 408 (1001)
T KOG2040|consen 330 VRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIY-HGPHGLKEIARRVHNLTLILA 408 (1001)
T ss_pred HhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhh-cCcHHHHHHHHHHHHHHHHHH
Confidence 321 0 00 0011223323322222211111 11111111 222567888888888899999
Q ss_pred HHHhhcCCeeecCCCccEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHH
Q 045431 354 ETFNSLGFKVYGGKNAPYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFK 429 (433)
Q Consensus 354 ~~l~~~g~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~ 429 (433)
..|++.|-++.. ..+|-.+.+. +...++++.+.+++ +|-++-- .++.+-+++ ..+++|++.++..+.
T Consensus 409 ~~l~~aghel~~--k~fFDTLkI~~~~s~~~~l~rA~~~-~iNlr~~------ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 409 EGLKNAGHELQH--KPFFDTLKIRCGCSAEEVLDRAAKR-QINLRLV------EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHHhhcchhhcc--ccccceEEEEecCcHHHHHHHHHhh-cCceEEe------ecCceEEeecccccHHHHHHHHHHHc
Confidence 999988866654 3366555554 33567777777766 6665432 356777887 447889998887764
No 405
>PRK11523 DNA-binding transcriptional repressor ExuR; Provisional
Probab=97.62 E-value=1.4e-05 Score=72.37 Aligned_cols=48 Identities=21% Similarity=0.049 Sum_probs=39.1
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc---ccCC-CCCCcHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL---GKLQ-AGYLFPEI 49 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~---~~l~-~g~~~~~~ 49 (433)
++++++|.+|+|+||++||++++||+++||||+|+- ..|. .|++....
T Consensus 15 ~~l~~~I~~g~l~pG~~LpsE~eLae~~gVSRtpVREAL~~L~~eGlV~~~~ 66 (253)
T PRK11523 15 AELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRK 66 (253)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEec
Confidence 468999999999999999999999999999999963 3332 36665443
No 406
>PRK09464 pdhR transcriptional regulator PdhR; Reviewed
Probab=97.62 E-value=1.5e-05 Score=72.36 Aligned_cols=47 Identities=21% Similarity=0.171 Sum_probs=38.5
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc---cCC-CCCCcHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG---KLQ-AGYLFPE 48 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~---~l~-~g~~~~~ 48 (433)
+++++.|.+|.|+||++|||+++||+++||||+|+-. .|. .|++...
T Consensus 17 ~~l~~~I~~g~l~pG~~LpsE~eLa~~lgVSRtpVREAL~~L~~eGlv~~~ 67 (254)
T PRK09464 17 QQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRR 67 (254)
T ss_pred HHHHHHHHcCCCCCCCcCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEe
Confidence 4678999999999999999999999999999999643 332 3665543
No 407
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0058 Score=57.16 Aligned_cols=311 Identities=12% Similarity=0.140 Sum_probs=170.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHHHH-HH---hc----CCC-----CEEEE-eCCCC
Q 045431 96 EGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDISRL-QI---VF----GSN-----VTMAV-QDPSY 159 (433)
Q Consensus 96 ~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~~l-~~---l~----~~g-----d~Vl~-~~p~~ 159 (433)
.+.+.|.-.++..-..+.+-..+.. +|....|.|+-..|+.+.++++ .+ .+ ..| +-|+. .+-+|
T Consensus 128 tn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesH 207 (510)
T KOG0629|consen 128 TNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESH 207 (510)
T ss_pred CCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccch
Confidence 4455665555555555555555443 5554457888888888888763 21 12 112 34443 66688
Q ss_pred hhhhhhHHHhCCcccccccccccceEEEeecCccCCcccC-CCC-----CC--CccEEEEcCC-CCccccCCCHHHHHHH
Q 045431 160 PAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPD-LST-----VA--RTDIIFFCSP-NNPTGAAATREQLTRL 230 (433)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~--~~~~i~l~~p-~nPtG~~~~~~~~~~i 230 (433)
.++......+|.- . ..++.++.+..+...++ +++ .. .+-.++=++. ....|. -+++..|
T Consensus 208 YSi~kaAa~lg~g-------t--d~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GA---FDdL~~i 275 (510)
T KOG0629|consen 208 YSIKKAAAFLGLG-------T--DHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGA---FDDLNGI 275 (510)
T ss_pred hhHHHHHHHhccC-------C--ceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeec---cCcHHHH
Confidence 8888888888731 1 36777777765544333 432 11 1222221122 344455 4558999
Q ss_pred HHHHHHcCCEEEEeccccccccCC-CCC-cccccCCCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHH
Q 045431 231 VQFAKDNGSIIVYDSAYALYISDD-NPR-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFN 308 (433)
Q Consensus 231 ~~~a~~~~~~li~De~~~~~~~~~-~~~-~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~ 308 (433)
+++|++|++++.+|.+|++...-+ ... .+..+... + -+-.+.+|.+| +.+.++....+.+-+. +...
T Consensus 276 adiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera-~--SvtwnpHK~~g-aplqCsa~l~r~~gll-------~~Cn 344 (510)
T KOG0629|consen 276 ADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERA-N--SVTWNPHKLMG-APLQCSAFLTREEGLL-------QRCN 344 (510)
T ss_pred HHHHHhcCEEEEeecccccccccChhhHhhccCcccc-C--ceeecHHHhhc-CcchhhHHHHHHHHHH-------Hhhc
Confidence 999999999999999998732222 111 12122111 1 34557899998 8888887776655431 1111
Q ss_pred HHHh-----------hccCCCcHHHHHH-------HHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeee-c--C
Q 045431 309 RIVC-----------TCFNGASNISQAG-------GLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVY-G--G 366 (433)
Q Consensus 309 ~~~~-----------~~~~~~~~~~q~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~--~ 366 (433)
+..+ .+.-+.....|-. .--+++..+....++..+++-+.++++.+.+++. ++..+ . |
T Consensus 345 ~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~p 424 (510)
T KOG0629|consen 345 QMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEP 424 (510)
T ss_pred ccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCC
Confidence 1000 0001112222211 1222334455567888889999999999999987 54432 2 3
Q ss_pred CCccEEEEECC----CC-ChH-----------HHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc---ChhHHHHHHHH
Q 045431 367 KNAPYVWVQFP----GR-SSW-----------DVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG---HRGNVLEACKR 427 (433)
Q Consensus 367 ~~g~~~~~~~~----~~-~~~-----------~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~~~l~~~l~~ 427 (433)
+..++.+--+| +. .+. .+-.+++++ |-....=... ...+++||+.+.. +.++++-.++.
T Consensus 425 e~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi~YqPl-~~~~nffr~v~sn~a~~~ad~dflldE 502 (510)
T KOG0629|consen 425 EHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKK-GTTMIGYQPL-GDKPNFFRMVISNPALTEADLDFLLDE 502 (510)
T ss_pred ceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhc-cceeeEeccc-ccccchhheecccchhhhhhHHHHHHH
Confidence 33333322222 11 111 223344444 5555321111 2236789998633 68888888888
Q ss_pred HHHh
Q 045431 428 FKHL 431 (433)
Q Consensus 428 l~~~ 431 (433)
|..+
T Consensus 503 Ierl 506 (510)
T KOG0629|consen 503 IERL 506 (510)
T ss_pred HHHh
Confidence 7654
No 408
>PRK10079 phosphonate metabolism transcriptional regulator PhnF; Provisional
Probab=97.58 E-value=5.9e-06 Score=74.30 Aligned_cols=48 Identities=15% Similarity=0.132 Sum_probs=38.3
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccccc---C-CCCCCcHHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGK---L-QAGYLFPEIA 50 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~---l-~~g~~~~~~~ 50 (433)
++|++.|.+ .+++|++|||+++||++++|||.|+-++ | .+|++....+
T Consensus 19 ~~L~~~I~~-~~~~G~~LPsE~eLa~~~~VSR~TVR~Al~~L~~eGli~r~~G 70 (241)
T PRK10079 19 AKLEQELRQ-HYRCGDYLPAEQQLAARYEVNRHTLRRAIDQLVEKGWVQRRQG 70 (241)
T ss_pred HHHHHHHhc-ccCCCCcCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 357788876 9999999999999999999999996443 3 3477776433
No 409
>PRK10421 DNA-binding transcriptional repressor LldR; Provisional
Probab=97.58 E-value=1.8e-05 Score=71.81 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=34.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~ 38 (433)
++|+++|.+|.|+||++||++++||+++||||+|+-.
T Consensus 9 ~~L~~~I~~g~l~pG~~LpsE~eLae~~gVSRtpVRE 45 (253)
T PRK10421 9 DRVRALIEEKNLEAGMKLPAERQLAMQLGVSRNSLRE 45 (253)
T ss_pred HHHHHHHHcCCCCCCCcCCCHHHHHHHhCCCHHHHHH
Confidence 4689999999999999999999999999999999643
No 410
>PRK03837 transcriptional regulator NanR; Provisional
Probab=97.55 E-value=2e-05 Score=70.87 Aligned_cols=36 Identities=11% Similarity=-0.066 Sum_probs=33.5
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~ 37 (433)
++++.+|.+|.++||++||++++||+++||||+|+-
T Consensus 20 ~~l~~~I~~g~l~pG~~Lp~E~~Lae~~gVSRt~VR 55 (241)
T PRK03837 20 ERLEQMIRSGEFGPGDQLPSERELMAFFGVGRPAVR 55 (241)
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHHHHhCCCHHHHH
Confidence 467899999999999999999999999999999963
No 411
>PRK10225 DNA-binding transcriptional repressor UxuR; Provisional
Probab=97.55 E-value=2e-05 Score=71.67 Aligned_cols=48 Identities=17% Similarity=-0.013 Sum_probs=39.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc---ccCC-CCCCcHHH
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL---GKLQ-AGYLFPEI 49 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~---~~l~-~g~~~~~~ 49 (433)
+++++.|.+|+|+||++||++++||+++||||+|+- ..|. .|++....
T Consensus 16 ~~l~~~I~~g~l~pG~~LpsE~eLa~~~gVSRtpVREAL~~L~~eGlV~~~~ 67 (257)
T PRK10225 16 AMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRR 67 (257)
T ss_pred HHHHHHHHhCCCCCCCcCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEec
Confidence 468999999999999999999999999999999963 3333 36665443
No 412
>TIGR03337 phnR transcriptional regulator protein. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Salmonella, Vibrio Aeromonas hydrophila, Hahella chejuensis and Psychromonas ingrahamii.
Probab=97.17 E-value=7.7e-05 Score=66.67 Aligned_cols=39 Identities=13% Similarity=0.047 Sum_probs=34.8
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccccC
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~~l 40 (433)
+.++++|++|.+++|++|||+++||++++|||.|+.+++
T Consensus 8 ~~l~~~I~~g~~~~g~~lPsE~eLa~~~~Vsr~Tvr~Al 46 (231)
T TIGR03337 8 DHLSYQIRAGALLPGDKLPSERDLGERFNTTRVTIREAL 46 (231)
T ss_pred HHHHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHHHH
Confidence 467889999999999999999999999999999975543
No 413
>PRK11414 colanic acid/biofilm transcriptional regulator; Provisional
Probab=97.11 E-value=0.00015 Score=64.36 Aligned_cols=36 Identities=8% Similarity=-0.156 Sum_probs=32.2
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~ 38 (433)
++++++|.+|+|+||++||. ++||+.|||||+|+-.
T Consensus 18 ~~l~~~I~~g~l~pG~~L~e-~~La~~lgVSRtpVRE 53 (221)
T PRK11414 18 NDLKHQLSIGALKPGARLIT-KNLAEQLGMSITPVRE 53 (221)
T ss_pred HHHHHHHHhCCCCCCCccCH-HHHHHHHCCCchhHHH
Confidence 46899999999999999996 7999999999999643
No 414
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.08 E-value=0.11 Score=46.29 Aligned_cols=329 Identities=15% Similarity=0.196 Sum_probs=166.2
Q ss_pred ceEEecCCCCCCCChHHHHHHHHHHHhhcccCCCCC--CCC-CCCCCHHHHHHHHHHHhccCCCCC-CcEEEc-CChHHH
Q 045431 64 EVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYS--GYG-AEQGEKPLRAAIASTFYKDLGIEE-GDIFVS-DGAKCD 138 (433)
Q Consensus 64 ~~i~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~Y~-~~~g~~~lr~~la~~l~~~~~~~~-~~i~~~-~G~~~a 138 (433)
.+++|+.|. -..|..++..+++.+-+... .++. .-+ .+.....+...--+.+...+.++. -.|++. .|++.-
T Consensus 7 ~vvnFaaGP--Aklp~~VL~e~qkdl~n~~g-~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~q 83 (370)
T KOG2790|consen 7 RVVNFAAGP--AKLPESVLLEAQKDLLNFNG-SGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQ 83 (370)
T ss_pred ceeecCCCc--ccCCHHHHHHHHHHhhccCC-CcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCccc
Confidence 589998885 34688888778877765432 2222 111 122222222222222222335543 355544 455555
Q ss_pred HHHH-HHhc--CCC---CEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccC-CcccC---CCCCCCccE
Q 045431 139 ISRL-QIVF--GSN---VTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAEN-GFFPD---LSTVARTDI 208 (433)
Q Consensus 139 l~~l-~~l~--~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~ 208 (433)
+.++ ..++ +.| |.|+.-+=+-..+.++ +.+|- ...+..+..... +-.++ .+..++.+-
T Consensus 84 FaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~-----------~~~V~~~~k~y~ygkvPd~~~w~~~~da~y 151 (370)
T KOG2790|consen 84 FAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGT-----------PNIVIPKLKSYTYGKVPDPSTWELNPDASY 151 (370)
T ss_pred ccccchhhhccccCCccceEEeccccHHHHHHH-HhhCC-----------ceEEeccccccccCcCCChhhcccCCCccE
Confidence 5543 4444 555 5555443222223332 22331 112222222111 01111 223356667
Q ss_pred EEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceee
Q 045431 209 IFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGW 288 (433)
Q Consensus 209 i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~ 288 (433)
+|+|.....-|+-++.-- .-.-++.++|.|-... |.. +|..+..+ -+++.+-.|.+|++| +-.
T Consensus 152 vyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn-flS--rpvDvsk~------gvi~aGAQKN~G~aG--~Tv 214 (370)
T KOG2790|consen 152 VYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN-FLS--RPVDVSKF------GVIFAGAQKNVGPAG--VTV 214 (370)
T ss_pred EEEecCceeeceecCCCC------CCCCCCceEEEecccc-hhc--CCccchhc------ceEEeccccccCccc--cEE
Confidence 888855555565443211 1123578888887544 322 24433322 255677899999888 455
Q ss_pred eeccccccccCCc--chhHHHHHH--HhhccCCCcHHHHH----HHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-
Q 045431 289 TVIPKELLFSDGF--PVAKDFNRI--VCTCFNGASNISQA----GGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL- 359 (433)
Q Consensus 289 l~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~q~----~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 359 (433)
++++++++-.... ...-++..+ ..+..++++....+ +...+++..+. ..+.+.-.++.+.+.+.+.+.
T Consensus 215 vivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl---~a~e~~n~~KskllYd~iD~s~ 291 (370)
T KOG2790|consen 215 VIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGL---AAMEKLNQEKSKLLYDAIDNSN 291 (370)
T ss_pred EEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHhcC
Confidence 6677777521000 000001000 11112223333222 22333444443 666666778899999999987
Q ss_pred CCeeecC----CCccEEEEECC-CCChHHHHHHHHHcCCeEecCCCCCCCCCCCeEEEeecc--ChhHHHHHHHHHHHhh
Q 045431 360 GFKVYGG----KNAPYVWVQFP-GRSSWDVFSEILEKTHVVTTPGSGFGPGGEGFIRVSAFG--HRGNVLEACKRFKHLY 432 (433)
Q Consensus 360 g~~~~~~----~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~~~l~~~l~~l~~~l 432 (433)
|+...+- .+-+.+.+++. .....+++.+..++ +..-.-|. ..-+.||-|+++ +-++.+.++.-|+++.
T Consensus 292 gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGh----RSVGGiRASlYNAisv~~~q~L~~~m~~F~ 366 (370)
T KOG2790|consen 292 GFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGH----RSVGGIRASLYNAISVEEVQKLAAFMKEFQ 366 (370)
T ss_pred CeEEcccchhhhhhcccceeecchHHHHHHHHHHHHh-hhhccccc----cccccchhhhhccccHHHHHHHHHHHHHHH
Confidence 7665432 23456667775 33455677777766 44333332 224679999865 8899999998888764
No 415
>PLN02672 methionine S-methyltransferase
Probab=96.92 E-value=0.013 Score=62.90 Aligned_cols=226 Identities=11% Similarity=0.066 Sum_probs=126.6
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCC
Q 045431 82 TSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYK--DLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSY 159 (433)
Q Consensus 82 ~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~--~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~ 159 (433)
+..+...+.+ ..++-|.++.|...+|..||.|+.. ++..++++|++.++-..++..+..++.|-=.++=+.-+-
T Consensus 407 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1082)
T PLN02672 407 LAYLASALKG----LSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTR 482 (1082)
T ss_pred HHHHHHHHcc----CCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhc
Confidence 3445555554 6778899999999999999999975 888899999999999999976544444431111111111
Q ss_pred hhhhhhHHHhCCcc--cccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHc
Q 045431 160 PAYVDSSVIMGQTG--EFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDN 237 (433)
Q Consensus 160 ~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~ 237 (433)
.--...+..+.+.+ .....+ ....++.-|.. .+...++-+.-++++++..-.+ +-..+....+.|++.+++.
T Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 556 (1082)
T PLN02672 483 WLPKKWLTSLAIENATSDSKSD-DVITVIEAPRQ--SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEI 556 (1082)
T ss_pred cCCHHHHhHhhhhcccccCccC-CeEEEEeCCCc--chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhh
Confidence 11112222222111 000000 00122222211 1222233334577776654333 2223455689999999999
Q ss_pred CCEEEEecccc-ccccCCCCCccccc-C--CCCcceEEEecccccccccccceeeeeccccccccCCcchhHHHHHHHhh
Q 045431 238 GSIIVYDSAYA-LYISDDNPRSIFEI-P--GAKEVAIETSSFSKYAGFTGVRLGWTVIPKELLFSDGFPVAKDFNRIVCT 313 (433)
Q Consensus 238 ~~~li~De~~~-~~~~~~~~~~~~~~-~--~~~~~vi~i~S~sK~~~~~G~r~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 313 (433)
|+.++.|..-. ++.....+..+..+ . ..+.+..++-++-|.-=.+.+-+.|++.-++-+ .+.+.+....
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 629 (1082)
T PLN02672 557 GARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAV-------LKALSKTGEV 629 (1082)
T ss_pred CcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHH-------HHHHHHHHHh
Confidence 99999998533 33333222222221 1 224455666678775556899999998776665 3444443333
Q ss_pred ccCCCcHHHHH
Q 045431 314 CFNGASNISQA 324 (433)
Q Consensus 314 ~~~~~~~~~q~ 324 (433)
....++.++|.
T Consensus 630 ~~~~~~~~~~~ 640 (1082)
T PLN02672 630 LEGRTAIISQF 640 (1082)
T ss_pred hccchHHHHHH
Confidence 34445666664
No 416
>PRK11534 DNA-binding transcriptional regulator CsiR; Provisional
Probab=96.85 E-value=0.00031 Score=62.37 Aligned_cols=35 Identities=3% Similarity=-0.259 Sum_probs=31.9
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~ 37 (433)
++|+++|-+|.++||++||. ++||+++||||+++-
T Consensus 14 ~~i~~~I~~g~l~pG~~L~e-~eLae~lgVSRtpVR 48 (224)
T PRK11534 14 RWLKNDIIRGNFQPDEKLRM-SLLTSRYALGVGPLR 48 (224)
T ss_pred HHHHHHHHhCCCCCCCcCCH-HHHHHHHCCChHHHH
Confidence 57899999999999999985 899999999999963
No 417
>smart00345 HTH_GNTR helix_turn_helix gluconate operon transcriptional repressor.
Probab=96.74 E-value=0.00028 Score=48.00 Aligned_cols=36 Identities=17% Similarity=0.017 Sum_probs=32.5
Q ss_pred cccccccccccccccCCChhhHHHHHhccccccccc
Q 045431 3 NAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 3 ~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~ 38 (433)
+++..+..+.+++|.+|||+++||+.+++|++|+..
T Consensus 4 ~l~~~i~~~~~~~~~~l~s~~~la~~~~vs~~tv~~ 39 (60)
T smart00345 4 RLREDIVSGELRPGDKLPSERELAAQLGVSRTTVRE 39 (60)
T ss_pred HHHHHHHcCCCCCCCcCcCHHHHHHHHCCCHHHHHH
Confidence 567888899999999999999999999999999654
No 418
>TIGR03338 phnR_burk phosphonate utilization associated transcriptional regulator. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Polaromonas, Burkholderia, Ralstonia and Verminephrobacter.
Probab=96.62 E-value=0.00054 Score=60.29 Aligned_cols=35 Identities=17% Similarity=-0.036 Sum_probs=32.0
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~ 37 (433)
++++.+|.+|.++||++| |+++||++|||||+|+-
T Consensus 18 ~~l~~~I~~g~l~pG~~L-~e~~La~~lgVSRtpVR 52 (212)
T TIGR03338 18 DEIERAILSGELPPGAKL-NESDIAARLGVSRGPVR 52 (212)
T ss_pred HHHHHHHHcCCCCCCCEe-cHHHHHHHhCCChHHHH
Confidence 468899999999999999 58999999999999963
No 419
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.28 E-value=0.33 Score=48.31 Aligned_cols=300 Identities=13% Similarity=0.141 Sum_probs=165.1
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcEEEcCChH---HHHHHHHHhc-CCC----CEEEEeCCCChhhhhhHHHhCCcccc
Q 045431 104 EQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAK---CDISRLQIVF-GSN----VTMAVQDPSYPAYVDSSVIMGQTGEF 175 (433)
Q Consensus 104 ~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~---~al~~l~~l~-~~g----d~Vl~~~p~~~~~~~~~~~~g~~~~~ 175 (433)
.+|+.++-+.+.++|..-.|.+.-.....+|++ .++..|.+.+ ..| ..-+++.-.|........++|
T Consensus 577 aqGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Mag----- 651 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAG----- 651 (1001)
T ss_pred HhhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcC-----
Confidence 578899999999998764344433444456664 3455565554 344 234778778877777888888
Q ss_pred cccccccceEEEeecCccCCcccC-CC----C-CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccc
Q 045431 176 QKDAEKYGKIEYMRCTAENGFFPD-LS----T-VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYAL 249 (433)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~-~~----~-~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~ 249 (433)
.+++++.++.++.++.. +. + ..+-.++.++.|+. .|+- .+.+++++++.++||--|..|.+...
T Consensus 652 -------mkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMN 721 (1001)
T KOG2040|consen 652 -------MKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMN 721 (1001)
T ss_pred -------CEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCcc
Confidence 58888888877654332 21 1 24566788877743 3443 56689999999999999999987653
Q ss_pred cccCCCCCcccccCCCCcceEEEeccccccccc----ccceeeeecccccccc-CCcchhHH--------HHHHHhhccC
Q 045431 250 YISDDNPRSIFEIPGAKEVAIETSSFSKYAGFT----GVRLGWTVIPKELLFS-DGFPVAKD--------FNRIVCTCFN 316 (433)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~----G~r~G~l~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~ 316 (433)
... .+....... -.+.=--++|+|+.| |-.+|=+.+.+.+.-. -...+... +..+ ....+
T Consensus 722 AqV-----Glc~pGd~G-aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsV-saaP~ 794 (1001)
T KOG2040|consen 722 AQV-----GLCRPGDIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSV-SAAPW 794 (1001)
T ss_pred cee-----cccCCcccc-ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccce-eccCC
Confidence 111 111110011 112222467877543 3345656665555310 00001110 1111 11112
Q ss_pred CCcHHHHHHHHHhcCcCChhHHHHHHHHHHHHHHHHHHHHhhc-CCeeecCCCccE---EEEECC------CCChHHHHH
Q 045431 317 GASNISQAGGLACLSPEGFKAVHEVIGFYKENTDIIVETFNSL-GFKVYGGKNAPY---VWVQFP------GRSSWDVFS 386 (433)
Q Consensus 317 ~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~~---~~~~~~------~~~~~~~~~ 386 (433)
.|........+++.--+...+....+..--+.+++.+.|+.+ .+-+..+ .|.. +.+++. +.+..++++
T Consensus 795 -Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~-~~~vaHEFIlD~r~fK~~agieavDvAK 872 (1001)
T KOG2040|consen 795 -GSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGE-NGLVAHEFILDLRPFKKTAGIEAVDVAK 872 (1001)
T ss_pred -CcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecC-CcceeeeeeeechhhccccCCcHHHHHH
Confidence 222222223333332222223444455556778888999886 4444443 3331 345543 356777887
Q ss_pred HHHHcCCeEecCCCCCCCCCCCeEEEee--ccChhHHHHHHHHHHHh
Q 045431 387 EILEKTHVVTTPGSGFGPGGEGFIRVSA--FGHRGNVLEACKRFKHL 431 (433)
Q Consensus 387 ~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~ 431 (433)
+|. .+|+....-+ |. -.+.+-|-- ..+.+|+++.+++|-++
T Consensus 873 RL~-DYgFHaPTms-wP--V~gtLMIEPTESE~k~ElDRfcdAliSI 915 (1001)
T KOG2040|consen 873 RLM-DYGFHAPTMS-WP--VAGTLMIEPTESEDKAELDRFCDALISI 915 (1001)
T ss_pred HHH-hccCCCCccc-cc--cCCceEeccCccccHHHHHHHHHHHHHH
Confidence 765 5687763332 22 235565553 23567888888887554
No 420
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.13 E-value=0.077 Score=46.65 Aligned_cols=127 Identities=13% Similarity=0.167 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcccccCCCCcceEEEecccccccccccceeeeec--cccccccCC
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYALYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVI--PKELLFSDG 300 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~sK~~~~~G~r~G~l~~--~~~~~~~~~ 300 (433)
+++.+++|..+|..|+++-|+..+|+. .....-..+.+-........++.|+.|.|-.| . -|.+++ .+..
T Consensus 172 ~pd~leaiaaica~~diphivnnaygl-qsee~i~~iaa~~~~grida~vqsldknf~vp-v-ggaiia~fk~n~----- 243 (432)
T KOG3843|consen 172 SPDNLEAIAAICAAHDIPHIVNNAYGL-QSEECIHKIAAAAECGRIDAFVQSLDKNFMVP-V-GGAIIAAFKDNF----- 243 (432)
T ss_pred CCchHHHHHHHHHccCchhhhcccccc-chHHHHHHHHHHhhhccHHHHHHHhhhcceee-c-chhHhhHhHHHH-----
Confidence 577899999999999999999999983 22221111221111111225577999988433 1 133332 2333
Q ss_pred cchhHHHHHHHhhccCCCcHHHHHHHHHhcCcCCh-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 045431 301 FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGF-KAVHEVIGFYKENTDIIVETFNSLG 360 (433)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~g 360 (433)
++.+.++........++......+-.+-..++ +-+.+..+.+...++.+...-+.+|
T Consensus 244 ---iq~iak~ypgrasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~ 301 (432)
T KOG3843|consen 244 ---IQEIAKMYPGRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIG 301 (432)
T ss_pred ---HHHHHHhCCCccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34454443333333333333333333333333 3344445555555555555444443
No 421
>PF14502 HTH_41: Helix-turn-helix domain
Probab=95.85 E-value=0.0023 Score=40.20 Aligned_cols=27 Identities=22% Similarity=0.031 Sum_probs=23.9
Q ss_pred ccccCCChhhHHHHHhccccccccccC
Q 045431 14 CKCVAAPQEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 14 ~~g~~LPs~r~la~~~~vs~~t~~~~l 40 (433)
++|+|+|++-++++.++||+.|+...+
T Consensus 1 k~GdRi~tI~e~~~~~~vs~GtiQ~Al 27 (48)
T PF14502_consen 1 KVGDRIPTISEYSEKFGVSRGTIQNAL 27 (48)
T ss_pred CCCcccCCHHHHHHHhCcchhHHHHHH
Confidence 589999999999999999999976543
No 422
>COG1802 GntR Transcriptional regulators [Transcription]
Probab=95.43 E-value=0.0055 Score=54.61 Aligned_cols=35 Identities=17% Similarity=0.014 Sum_probs=32.4
Q ss_pred ccccccccccccccccCCChhhHHHHHhcccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~ 37 (433)
+.++.+|-+|+|+||++|. +++||+++|||++++-
T Consensus 23 ~~Lr~~Il~g~l~pG~~l~-e~~La~~~gvSrtPVR 57 (230)
T COG1802 23 EELREAILSGELAPGERLS-EEELAEELGVSRTPVR 57 (230)
T ss_pred HHHHHHHHhCCCCCCCCcc-HHHHHHHhCCCCccHH
Confidence 4689999999999999998 9999999999999963
No 423
>cd07377 WHTH_GntR Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators. This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is
Probab=91.47 E-value=0.057 Score=37.13 Aligned_cols=36 Identities=17% Similarity=-0.008 Sum_probs=30.9
Q ss_pred cccccccccccccccCCChhhHHHHHhccccccccc
Q 045431 3 NAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 3 ~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~~~ 38 (433)
.++..+..+.+.+|.++|+.++||+.+++|++++..
T Consensus 9 ~i~~~i~~~~~~~~~~~~~~~~la~~~~is~~~v~~ 44 (66)
T cd07377 9 QLREAILSGELKPGDRLPSERELAEELGVSRTTVRE 44 (66)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHCCCHHHHHH
Confidence 456677788889999999999999999999998643
No 424
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=87.74 E-value=8.4 Score=35.38 Aligned_cols=164 Identities=12% Similarity=0.122 Sum_probs=80.3
Q ss_pred CChhhHHHHHhccccccccc---cCC-CCCCcHHHHHHHHHHHhcCCCCceEEecCCCCCC--CChHHHHHHHHHHHhhc
Q 045431 19 APQEEKIAYKTKVSRNGNLG---KLQ-AGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTE--PIPEVITSALAKRSYAL 92 (433)
Q Consensus 19 LPs~r~la~~~~vs~~t~~~---~l~-~g~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~--~~~~~~~~a~~~~~~~~ 92 (433)
.-++++||++.|||.+|+.+ +|. +||-.-+..-... .... .....+- ....+- .....+.+...+.+...
T Consensus 36 ~~si~elA~~a~VS~aTv~Rf~~kLGf~Gf~efk~~l~~~--l~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~t 111 (281)
T COG1737 36 LLSIAELAERAGVSPATVVRFARKLGFEGFSEFKLALAQE--LAEG-RAQLLRE-IAEDDGPESILEKLLAANIAALERT 111 (281)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCCHHHHHHHHHHH--Hhhc-cchhhcc-cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55789999999999999864 232 2454333221111 1100 1122222 111110 12234444444444432
Q ss_pred ccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEE-EcCChHHHHHH-H-HHhcCCCCEEEEeCCCChhhhhhHHHh
Q 045431 93 STQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIF-VSDGAKCDISR-L-QIVFGSNVTMAVQDPSYPAYVDSSVIM 169 (433)
Q Consensus 93 ~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~-~~~G~~~al~~-l-~~l~~~gd~Vl~~~p~~~~~~~~~~~~ 169 (433)
. ..-.++--+.+++.+ .+++.|+ ++-|++..+.. + ..+.+=|..+...+-.+... .....+
T Consensus 112 ~----------~~l~~~~l~~av~~L-----~~A~rI~~~G~g~S~~vA~~~~~~l~~ig~~~~~~~d~~~~~-~~~~~~ 175 (281)
T COG1737 112 L----------NLLDEEALERAVELL-----AKARRIYFFGLGSSGLVASDLAYKLMRIGLNVVALSDTHGQL-MQLALL 175 (281)
T ss_pred H----------HhcCHHHHHHHHHHH-----HcCCeEEEEEechhHHHHHHHHHHHHHcCCceeEecchHHHH-HHHHhC
Confidence 1 112244444555555 3555555 45555555543 3 66677777666554444332 222111
Q ss_pred CCcccccccccccceEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 170 GQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
+ ++--+|.++.. |. ..++.+.++.++++|+.+|
T Consensus 176 ~---------------------------------~~Dv~i~iS~s----G~---t~e~i~~a~~ak~~ga~vI 208 (281)
T COG1737 176 T---------------------------------PGDVVIAISFS----GY---TREIVEAAELAKERGAKVI 208 (281)
T ss_pred C---------------------------------CCCEEEEEeCC----CC---cHHHHHHHHHHHHCCCcEE
Confidence 1 12123444422 22 3558889999999998877
No 425
>PF02796 HTH_7: Helix-turn-helix domain of resolvase; InterPro: IPR006120 Site-specific recombination plays an important role in DNA rearrangement in prokaryotic organisms. Two types of site-specific recombination are known to occur: Recombination between inverted repeats resulting in the reversal of a DNA segment. Recombination between repeat sequences on two DNA molecules resulting in their cointegration, or between repeats on one DNA molecule resulting in the excision of a DNA fragment. Site-specific recombination is characterised by a strand exchange mechanism that requires no DNA synthesis or high energy cofactor; the phosphodiester bond energy is conserved in a phospho-protein linkage during strand cleavage and re-ligation. Two unrelated families of recombinases are currently known []. The first, called the 'phage integrase' family, groups a number of bacterial phage and yeast plasmid enzymes. The second [], called the 'resolvase' family, groups enzymes which share the following structural characteristics: an N-terminal catalytic and dimerization domain that contains a conserved serine residue involved in the transient covalent attachment to DNA IPR006119 from INTERPRO, and a C-terminal helix-turn-helix DNA-binding domain. ; GO: 0000150 recombinase activity, 0003677 DNA binding, 0006310 DNA recombination; PDB: 1ZR2_A 2GM4_B 1RES_A 1ZR4_A 1RET_A 1GDT_B 2R0Q_C 1JKP_C 1IJW_C 1JJ6_C ....
Probab=84.54 E-value=0.25 Score=31.12 Aligned_cols=20 Identities=30% Similarity=0.169 Sum_probs=15.9
Q ss_pred hhhHHHHHhccccccccccC
Q 045431 21 QEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l 40 (433)
|..++|+.+|||++|+|.-+
T Consensus 23 si~~IA~~~gvsr~TvyR~l 42 (45)
T PF02796_consen 23 SIAEIAKQFGVSRSTVYRYL 42 (45)
T ss_dssp -HHHHHHHTTS-HHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHH
Confidence 59999999999999988643
No 426
>PF13730 HTH_36: Helix-turn-helix domain
Probab=81.39 E-value=0.45 Score=31.35 Aligned_cols=24 Identities=25% Similarity=0.163 Sum_probs=20.2
Q ss_pred ccCCChhhHHHHHhcccccccccc
Q 045431 16 CVAAPQEEKIAYKTKVSRNGNLGK 39 (433)
Q Consensus 16 g~~LPs~r~la~~~~vs~~t~~~~ 39 (433)
|.-=||.+.||+.+|+|++|+.+.
T Consensus 22 ~~~~pS~~~la~~~g~s~~Tv~~~ 45 (55)
T PF13730_consen 22 GGCFPSQETLAKDLGVSRRTVQRA 45 (55)
T ss_pred CCCCcCHHHHHHHHCcCHHHHHHH
Confidence 346789999999999999997654
No 427
>PRK12423 LexA repressor; Provisional
Probab=80.63 E-value=0.35 Score=42.03 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=26.9
Q ss_pred ccccccccccccccCCChhhHHHHHhc-cccccccccC---C-CCCCcHH
Q 045431 4 AWVQAKRISVCKCVAAPQEEKIAYKTK-VSRNGNLGKL---Q-AGYLFPE 48 (433)
Q Consensus 4 ~~~~~~~g~l~~g~~LPs~r~la~~~~-vs~~t~~~~l---~-~g~~~~~ 48 (433)
+++.+.++.++ ||+|+||+.+| +|++++..++ . .||+...
T Consensus 15 l~~~i~~~g~~-----Ps~~eia~~~g~~s~~~v~~~l~~L~~~G~l~~~ 59 (202)
T PRK12423 15 IRERIAQAGQP-----PSLAEIAQAFGFASRSVARKHVQALAEAGLIEVV 59 (202)
T ss_pred HHHHHHHcCCC-----CCHHHHHHHhCCCChHHHHHHHHHHHHCCCEEec
Confidence 44445555444 99999999999 5898865443 2 3666543
No 428
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=80.44 E-value=23 Score=30.82 Aligned_cols=96 Identities=14% Similarity=0.245 Sum_probs=58.0
Q ss_pred CCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC
Q 045431 124 IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV 203 (433)
Q Consensus 124 ~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (433)
..-..|++..|+..+..-+..+++.|-.|.+.+|....-...+...| ++..+.-+. ... ..
T Consensus 7 l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-------------~i~~~~~~~----~~~--dl 67 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQG-------------GITWLARCF----DAD--IL 67 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcC-------------CEEEEeCCC----CHH--Hh
Confidence 34457889999999988888888999888888887654333332223 233332211 111 11
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEE-EEecc
Q 045431 204 ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSII-VYDSA 246 (433)
Q Consensus 204 ~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~l-i~De~ 246 (433)
....+|+ ..|.++ +.-.+|.+.|++.++++ +.|+.
T Consensus 68 ~~~~lVi-~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 68 EGAFLVI-AATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CCcEEEE-ECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 2444444 344442 22478999999999888 35554
No 429
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional
Probab=79.79 E-value=15 Score=34.50 Aligned_cols=35 Identities=14% Similarity=0.017 Sum_probs=25.0
Q ss_pred cCCChhhHHHHHhccccccccccCC-CCCCcHHHHH
Q 045431 17 VAAPQEEKIAYKTKVSRNGNLGKLQ-AGYLFPEIAR 51 (433)
Q Consensus 17 ~~LPs~r~la~~~~vs~~t~~~~l~-~g~~~~~~~~ 51 (433)
.+-++++++|+..|||++|+-..|. ++++..+..+
T Consensus 4 ~~~~Ti~dIA~~agVS~~TVSr~Ln~~~~vs~~tr~ 39 (342)
T PRK10014 4 AKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGE 39 (342)
T ss_pred CCCCcHHHHHHHhCCCHHHHHHHHCCCCCCCHHHHH
Confidence 4458999999999999999755443 2555555443
No 430
>PF13936 HTH_38: Helix-turn-helix domain; PDB: 2W48_A.
Probab=78.76 E-value=0.75 Score=28.78 Aligned_cols=20 Identities=20% Similarity=0.034 Sum_probs=14.2
Q ss_pred ChhhHHHHHhcccccccccc
Q 045431 20 PQEEKIAYKTKVSRNGNLGK 39 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~ 39 (433)
.|.|++|+.||+|++|++..
T Consensus 21 ~s~~~IA~~lg~s~sTV~re 40 (44)
T PF13936_consen 21 MSIREIAKRLGRSRSTVSRE 40 (44)
T ss_dssp --HHHHHHHTT--HHHHHHH
T ss_pred CCHHHHHHHHCcCcHHHHHH
Confidence 57999999999999998654
No 431
>PRK11014 transcriptional repressor NsrR; Provisional
Probab=77.45 E-value=0.71 Score=37.50 Aligned_cols=34 Identities=15% Similarity=-0.074 Sum_probs=29.1
Q ss_pred ccccccccccccccccCCChhhHHHHHhccccccc
Q 045431 2 QNAWVQAKRISVCKCVAAPQEEKIAYKTKVSRNGN 36 (433)
Q Consensus 2 ~~~~~~~~~g~l~~g~~LPs~r~la~~~~vs~~t~ 36 (433)
..++..|-.+.+++|. ++|++++|+.++||++++
T Consensus 9 YAl~~~i~la~~~~g~-~~s~~~ia~~~~is~~~v 42 (141)
T PRK11014 9 YGLRALIYMASLPEGR-MTSISEVTEVYGVSRNHM 42 (141)
T ss_pred HHHHHHHHHhcCCCCC-ccCHHHHHHHHCcCHHHH
Confidence 3567788889999985 789999999999999985
No 432
>PF01726 LexA_DNA_bind: LexA DNA binding domain; InterPro: IPR006199 This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins in bacteria. The aligned region contains a variant form of the helix-turn-helix DNA binding motif []. This domain usually at the N terminus is found associated with IPR006198 from INTERPRO the auto-proteolytic domain of LexA 3.4.21.88 from EC.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1LEA_A 1JHH_A 3JSP_A 1JHF_A 3JSO_B 1LEB_A 3K2Z_A.
Probab=76.88 E-value=0.55 Score=32.28 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=14.2
Q ss_pred CChhhHHHHHhccc-cccccc
Q 045431 19 APQEEKIAYKTKVS-RNGNLG 38 (433)
Q Consensus 19 LPs~r~la~~~~vs-~~t~~~ 38 (433)
-||.|++|+.+|++ .+++..
T Consensus 25 ~Pt~rEIa~~~g~~S~~tv~~ 45 (65)
T PF01726_consen 25 PPTVREIAEALGLKSTSTVQR 45 (65)
T ss_dssp ---HHHHHHHHTSSSHHHHHH
T ss_pred CCCHHHHHHHhCCCChHHHHH
Confidence 49999999999997 666543
No 433
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=74.71 E-value=4.6 Score=41.13 Aligned_cols=40 Identities=25% Similarity=0.363 Sum_probs=34.5
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISDDN 255 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~~~ 255 (433)
.|++..|. +++++++++.|++.||-||.|=+|+.|..++.
T Consensus 205 Ap~sryGt---Pedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 205 APTSRYGT---PEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred cccccCCC---HHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 57777775 89999999999999999999999998866543
No 434
>PF13384 HTH_23: Homeodomain-like domain; PDB: 2X48_C.
Probab=73.13 E-value=1.3 Score=28.32 Aligned_cols=18 Identities=28% Similarity=0.198 Sum_probs=14.4
Q ss_pred hhhHHHHHhccccccccc
Q 045431 21 QEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~ 38 (433)
|.+++|+.+|||++|++.
T Consensus 19 s~~~ia~~lgvs~~Tv~~ 36 (50)
T PF13384_consen 19 SIREIAKRLGVSRSTVYR 36 (50)
T ss_dssp -HHHHHHHHTS-HHHHHH
T ss_pred CHHHHHHHHCcCHHHHHH
Confidence 589999999999999754
No 435
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=69.52 E-value=57 Score=30.74 Aligned_cols=72 Identities=18% Similarity=0.179 Sum_probs=38.5
Q ss_pred ChhhHHHHHhccccccccccCCC-CCCcHHHHHHHHHHHh-------------cCCCCceEEecCCCCCCCChHHHHHHH
Q 045431 20 PQEEKIAYKTKVSRNGNLGKLQA-GYLFPEIARRKAAHML-------------KYPDAEVISLGIGDTTEPIPEVITSAL 85 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~l~~-g~~~~~~~~~~~~~~~-------------~~~~~~~i~l~~g~~~~~~~~~~~~a~ 85 (433)
+.+.++|+..|||++|+-..+.. +++..+..++...... ......+|-+-..+..-+.-..+.+.+
T Consensus 1 ~TikDVA~~AGVS~sTVSrvln~~~~Vs~eTr~kV~~a~~elgY~pN~~Ar~L~~~~s~~Ig~i~p~~~~~~~~~i~~gi 80 (333)
T COG1609 1 ATIKDVAKLAGVSKATVSRVLNGSPYVSEETREKVLAAIKELGYRPNAVARSLRTGRTKTIGLVVPDITNPFFAEILKGI 80 (333)
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHH
Confidence 35789999999999997655432 3455544333221111 011223444433333334556666666
Q ss_pred HHHHhh
Q 045431 86 AKRSYA 91 (433)
Q Consensus 86 ~~~~~~ 91 (433)
.+.+.+
T Consensus 81 ~~~~~~ 86 (333)
T COG1609 81 EEAARE 86 (333)
T ss_pred HHHHHH
Confidence 666655
No 436
>TIGR01321 TrpR trp operon repressor, proteobacterial. This model represents TrpR, the repressor of the trp operon. It is found so far only in the gamma subdivision of the proteobacteria and in Chlamydia trachomatis. All members belong to species capable of tryptophan biosynthesis.
Probab=68.92 E-value=2.5 Score=31.29 Aligned_cols=17 Identities=29% Similarity=0.130 Sum_probs=15.3
Q ss_pred hhhHHHHHhcccccccc
Q 045431 21 QEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~ 37 (433)
|+|++|+.+|||++|+.
T Consensus 57 tQrEIa~~lGiS~atIs 73 (94)
T TIGR01321 57 SQREIASKLGVSIATIT 73 (94)
T ss_pred CHHHHHHHhCCChhhhh
Confidence 59999999999999853
No 437
>PRK09492 treR trehalose repressor; Provisional
Probab=67.72 E-value=88 Score=28.81 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=22.4
Q ss_pred CCChhhHHHHHhccccccccccCCC-CCCcHH
Q 045431 18 AAPQEEKIAYKTKVSRNGNLGKLQA-GYLFPE 48 (433)
Q Consensus 18 ~LPs~r~la~~~~vs~~t~~~~l~~-g~~~~~ 48 (433)
+-|+++++|+..|||++|+-..|.. +.+..+
T Consensus 3 ~~~ti~dIA~~agVS~~TVSrvLn~~~~vs~~ 34 (315)
T PRK09492 3 NKLTIKDIARLSGVGKSTVSRVLNNESGVSEE 34 (315)
T ss_pred CCCcHHHHHHHhCCCHHHHhHHhCCCCCCCHH
Confidence 3478999999999999997655432 344443
No 438
>PRK01381 Trp operon repressor; Provisional
Probab=67.55 E-value=3 Score=31.12 Aligned_cols=17 Identities=12% Similarity=0.005 Sum_probs=15.4
Q ss_pred hhhHHHHHhcccccccc
Q 045431 21 QEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~ 37 (433)
|+|++|+.+|||.+|+.
T Consensus 57 sQREIa~~lGvSiaTIT 73 (99)
T PRK01381 57 SQREIKQELGVGIATIT 73 (99)
T ss_pred CHHHHHHHhCCceeeeh
Confidence 59999999999999964
No 439
>PRK09526 lacI lac repressor; Reviewed
Probab=65.09 E-value=91 Score=29.13 Aligned_cols=74 Identities=18% Similarity=0.093 Sum_probs=40.2
Q ss_pred CCChhhHHHHHhccccccccccCCC-CCCcHHHHHHHHHHH-------------hcCCCCceEEecCCCCCCCChHHHHH
Q 045431 18 AAPQEEKIAYKTKVSRNGNLGKLQA-GYLFPEIARRKAAHM-------------LKYPDAEVISLGIGDTTEPIPEVITS 83 (433)
Q Consensus 18 ~LPs~r~la~~~~vs~~t~~~~l~~-g~~~~~~~~~~~~~~-------------~~~~~~~~i~l~~g~~~~~~~~~~~~ 83 (433)
+..+++++|+..|||++|+-..|.. +.+..+..++..... ........|-+-......+....+.+
T Consensus 4 ~~~ti~dIA~~aGVS~~TVSrvLn~~~~vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~~~~ 83 (342)
T PRK09526 4 KPVTLYDVARYAGVSYQTVSRVLNQASHVSAKTREKVEAAMAELNYVPNRVAQQLAGKQSLTIGLATTSLALHAPSQIAA 83 (342)
T ss_pred CCCcHHHHHHHhCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhcCCCceEEEEeCCCCcccHHHHHH
Confidence 4468999999999999997544432 334443322211110 11112235555444333344566777
Q ss_pred HHHHHHhh
Q 045431 84 ALAKRSYA 91 (433)
Q Consensus 84 a~~~~~~~ 91 (433)
.+.+.+.+
T Consensus 84 gi~~~a~~ 91 (342)
T PRK09526 84 AIKSRADQ 91 (342)
T ss_pred HHHHHHHH
Confidence 77776664
No 440
>PRK14987 gluconate operon transcriptional regulator; Provisional
Probab=60.71 E-value=68 Score=29.91 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=23.2
Q ss_pred CCChhhHHHHHhccccccccccCCC-CCCcHHH
Q 045431 18 AAPQEEKIAYKTKVSRNGNLGKLQA-GYLFPEI 49 (433)
Q Consensus 18 ~LPs~r~la~~~~vs~~t~~~~l~~-g~~~~~~ 49 (433)
+.|+++++|+..|||++|+-..|.. +.+..+.
T Consensus 4 ~~~ti~dIA~~agVS~~TVSrvLn~~~~vs~~t 36 (331)
T PRK14987 4 KRPVLQDVADRVGVTKMTVSRFLRNPEQVSVAL 36 (331)
T ss_pred CCCcHHHHHHHhCCCHHHhhhhhCCCCCCCHHH
Confidence 3589999999999999997655532 3444443
No 441
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=59.42 E-value=8 Score=36.44 Aligned_cols=44 Identities=16% Similarity=0.288 Sum_probs=29.7
Q ss_pred CCccEEEEcCC-CCccccCCC--------------HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 204 ARTDIIFFCSP-NNPTGAAAT--------------REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 204 ~~~~~i~l~~p-~nPtG~~~~--------------~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
++.+ ++++|| |..-+.-|. ...-.+|.++|++||+++++|=.-+
T Consensus 261 p~Ad-vVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enppLA 319 (363)
T COG1377 261 PKAD-VVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENPPLA 319 (363)
T ss_pred CCCC-EEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecChHHH
Confidence 4455 455777 544443333 3345789999999999999996543
No 442
>PRK10703 DNA-binding transcriptional repressor PurR; Provisional
Probab=59.28 E-value=55 Score=30.67 Aligned_cols=22 Identities=14% Similarity=0.090 Sum_probs=18.1
Q ss_pred ChhhHHHHHhccccccccccCC
Q 045431 20 PQEEKIAYKTKVSRNGNLGKLQ 41 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~l~ 41 (433)
+.++++|+..|||++|+-..|.
T Consensus 2 ~Ti~dIA~~agVS~~TVSrvLn 23 (341)
T PRK10703 2 ATIKDVAKRAGVSTTTVSHVIN 23 (341)
T ss_pred CCHHHHHHHhCCCHHHHHHHHc
Confidence 4689999999999999755543
No 443
>PF13309 HTH_22: HTH domain
Probab=59.28 E-value=3.8 Score=28.05 Aligned_cols=20 Identities=30% Similarity=0.174 Sum_probs=16.1
Q ss_pred hhhHHHHHhccccccccccC
Q 045431 21 QEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l 40 (433)
+.-.+|+.|+||+.|+|.-|
T Consensus 44 av~~vA~~L~iS~~TVY~YL 63 (64)
T PF13309_consen 44 AVEYVAEKLGISRATVYRYL 63 (64)
T ss_pred HHHHHHHHHCCCHHHHHHHc
Confidence 34578999999999998643
No 444
>TIGR02405 trehalos_R_Ecol trehalose operon repressor, proteobacterial. This family consists of repressors of the LacI family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gammaproteobacteria and does not include the GntR family TreR of Bacillus subtilis
Probab=58.60 E-value=66 Score=29.70 Aligned_cols=21 Identities=19% Similarity=0.034 Sum_probs=17.8
Q ss_pred ChhhHHHHHhccccccccccC
Q 045431 20 PQEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~l 40 (433)
++++++|+..|||++|+-..|
T Consensus 2 ~ti~dIA~~agVS~sTVSr~L 22 (311)
T TIGR02405 2 LTIKDIARLAGVGKSTVSRVL 22 (311)
T ss_pred CcHHHHHHHhCCCHHHHHHHh
Confidence 578999999999999975544
No 445
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=55.60 E-value=7.7 Score=36.86 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|++||+++|+|-.-+
T Consensus 297 d~~A~~Ir~~A~e~~VPiven~pLA 321 (358)
T PRK13109 297 DLIALKIREIAEENGIPVIEDKPLA 321 (358)
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 3456899999999999999996543
No 446
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=55.58 E-value=1.6e+02 Score=26.71 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=17.3
Q ss_pred CChhhHHHHHhccccccccc
Q 045431 19 APQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 19 LPs~r~la~~~~vs~~t~~~ 38 (433)
.-|+++||++.+||.+|+.+
T Consensus 30 ~~si~elA~~~~vS~aTv~R 49 (278)
T PRK11557 30 HLSSQQLANEAGVSQSSVVK 49 (278)
T ss_pred hcCHHHHHHHhCCCHHHHHH
Confidence 35799999999999999754
No 447
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=55.26 E-value=1.7e+02 Score=26.83 Aligned_cols=19 Identities=21% Similarity=0.011 Sum_probs=16.6
Q ss_pred ChhhHHHHHhccccccccc
Q 045431 20 PQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~ 38 (433)
-++++||+..+||.+|+.+
T Consensus 47 ~si~~lA~~~~vS~aTi~R 65 (292)
T PRK11337 47 TALKDIAEALAVSEAMIVK 65 (292)
T ss_pred cCHHHHHHHhCCChHHHHH
Confidence 3689999999999999764
No 448
>PF04218 CENP-B_N: CENP-B N-terminal DNA-binding domain; InterPro: IPR006695 Centromere Protein B (CENP-B) is a DNA-binding protein localized to the centromere. Within the N-terminal 125 residues, there is a DNA-binding region, which binds to a corresponding 17bp CENP-B box sequence. CENP-B dimers either bind two separate DNA molecules or alternatively, they may bind two CENP-B boxes on one DNA molecule, with the intervening stretch of DNA forming a loop structure. The CENP-B DNA-binding domain consists of two repeating domains, RP1 and RP2. This family corresponds to RP1 has been shown to consist of four helices in a helix-turn-helix structure [].; GO: 0003677 DNA binding, 0000775 chromosome, centromeric region; PDB: 1BW6_A 1HLV_A 2ELH_A.
Probab=55.16 E-value=6.4 Score=25.70 Aligned_cols=18 Identities=28% Similarity=0.189 Sum_probs=13.4
Q ss_pred ChhhHHHHHhcccccccc
Q 045431 20 PQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~ 37 (433)
||.+++|..+||+++|+.
T Consensus 23 ~s~~~ia~~fgv~~sTv~ 40 (53)
T PF04218_consen 23 ESKRDIAREFGVSRSTVS 40 (53)
T ss_dssp T-HHHHHHHHT--CCHHH
T ss_pred CCHHHHHHHhCCCHHHHH
Confidence 489999999999999964
No 449
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=54.54 E-value=38 Score=31.95 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=36.5
Q ss_pred eEEEeecCccCCcccCCCCCCCcc--EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 184 KIEYMRCTAENGFFPDLSTVARTD--IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~--~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
+...+.+.++.+|..++...++.. .-. +....+.|..++.+++++|++.|+++||-||
T Consensus 33 N~lhlHLtD~~~~rle~~~~P~lt~~ga~-~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 33 NVLHLHLTDDQGWRIEIKSWPKLTEIGGS-TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred cEEEEEeecCCcceeeecCcccccccccc-cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 555566555556655444322111 001 1122455778999999999999999999988
No 450
>PRK09108 type III secretion system protein HrcU; Validated
Probab=51.90 E-value=9.1 Score=36.31 Aligned_cols=25 Identities=24% Similarity=0.151 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+--.+|.++|++||+++|+|-.-+
T Consensus 290 d~~A~~Ir~~A~e~~VPvven~pLA 314 (353)
T PRK09108 290 DDGALALRRHAHALGIPIVGNPPVA 314 (353)
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 3456899999999999999996543
No 451
>COG2973 TrpR Trp operon repressor [Transcription]
Probab=50.99 E-value=8 Score=28.53 Aligned_cols=17 Identities=29% Similarity=0.133 Sum_probs=15.0
Q ss_pred hhhHHHHHhcccccccc
Q 045431 21 QEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~ 37 (433)
|+|++++.||||-.|+.
T Consensus 62 sQREi~~~LgvsiAtIT 78 (103)
T COG2973 62 SQREIAQKLGVSIATIT 78 (103)
T ss_pred cHHHHHHHhCcchhhhc
Confidence 59999999999988854
No 452
>PF12116 SpoIIID: Stage III sporulation protein D; InterPro: IPR014208 Members of this entry represent the transcriptional regulator SpoIIID, or stage III sporulation protein D. It is present in genomes if, and only if, the species is capable of endospore formation. In Bacillus subtilis SpoIIID is a DNA binding protein that is involved in gene repression as well as activation [].; PDB: 2L0K_A.
Probab=50.92 E-value=6.6 Score=27.86 Aligned_cols=20 Identities=15% Similarity=-0.002 Sum_probs=15.3
Q ss_pred hhhHHHHHhccccccccccC
Q 045431 21 QEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l 40 (433)
.+|+.|..+|||++|+...+
T Consensus 21 TVR~~Ak~FGvSKSTVHkDv 40 (82)
T PF12116_consen 21 TVRQAAKVFGVSKSTVHKDV 40 (82)
T ss_dssp -HHHHHHHHTS-HHHHHHHH
T ss_pred HHHHHHHHHCCcHHHHHHHH
Confidence 48999999999999975443
No 453
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=50.36 E-value=10 Score=36.39 Aligned_cols=25 Identities=8% Similarity=0.102 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+--.+|.++|++||+++|+|-.-+
T Consensus 295 d~~A~~Ir~~A~e~~VPiven~pLA 319 (386)
T PRK12468 295 GAVALRIRELGAEHRIPLLEAPPLA 319 (386)
T ss_pred cHHHHHHHHHHHHcCCcEEeCHHHH
Confidence 3456899999999999999996544
No 454
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=50.21 E-value=34 Score=31.79 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=35.0
Q ss_pred eEEEeecCccCCcccCCCCCCCcc--EEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 184 KIEYMRCTAENGFFPDLSTVARTD--IIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~--~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
+...+.+.++.++..+....+... .-. .++ .+.|..++.+++++|++.|+++||-||
T Consensus 31 N~lhlHl~D~~~~~le~~~~p~l~~~g~~-~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 31 NTFHWHLTDDQAWRIESKKFPELAEKGGQ-INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred cEEEEeeecCCCceEeeCccchhhhhccc-ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 555555555555554433322110 000 111 244568999999999999999999988
No 455
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=50.20 E-value=1.8e+02 Score=25.65 Aligned_cols=94 Identities=4% Similarity=0.112 Sum_probs=59.1
Q ss_pred CCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCCCC
Q 045431 126 EGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTVAR 205 (433)
Q Consensus 126 ~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (433)
..+|++..|+.-|.-=+..+++.|..|.+.+|....-...+...| .+..+.-. +.+ ....+
T Consensus 25 ~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~-------------~i~~~~r~----~~~--~dl~g 85 (223)
T PRK05562 25 KIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYG-------------NLKLIKGN----YDK--EFIKD 85 (223)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCC-------------CEEEEeCC----CCh--HHhCC
Confidence 447999999999987788888999999999998755443333333 23333321 111 11235
Q ss_pred ccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE-Eecc
Q 045431 206 TDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV-YDSA 246 (433)
Q Consensus 206 ~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li-~De~ 246 (433)
..+|+.++. +.+-=++|.+.|+++++++. +|+.
T Consensus 86 ~~LViaATd--------D~~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 86 KHLIVIATD--------DEKLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred CcEEEECCC--------CHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 555565422 34445899999999876544 5663
No 456
>PRK08156 type III secretion system protein SpaS; Validated
Probab=49.90 E-value=9.4 Score=36.27 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+--.+|.++|++||+++++|-.-+
T Consensus 283 d~~A~~IreiA~e~~VPiven~pLA 307 (361)
T PRK08156 283 NQRALAVRAYAEKVGVPVVRDIKLA 307 (361)
T ss_pred cHHHHHHHHHHHHCCCCEeeCHHHH
Confidence 3456899999999999999996543
No 457
>PRK04148 hypothetical protein; Provisional
Probab=49.10 E-value=75 Score=25.47 Aligned_cols=41 Identities=20% Similarity=0.351 Sum_probs=28.6
Q ss_pred CcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEEE
Q 045431 195 GFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIVY 243 (433)
Q Consensus 195 ~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~ 243 (433)
-+.++++--.+.++||-+.| +.|-..-|+++|++.|+-+++
T Consensus 67 lf~p~~~~y~~a~liysirp--------p~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 67 LFNPNLEIYKNAKLIYSIRP--------PRDLQPFILELAKKINVPLII 107 (134)
T ss_pred CCCCCHHHHhcCCEEEEeCC--------CHHHHHHHHHHHHHcCCCEEE
Confidence 34444444457788885544 466678999999999987774
No 458
>PRK06298 type III secretion system protein; Validated
Probab=48.46 E-value=18 Score=34.42 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|++||+++|+|-.-+
T Consensus 289 d~~A~~Ir~iA~e~~VPiven~pLA 313 (356)
T PRK06298 289 NLRAKRIIAEAEKYGVPIMRNVPLA 313 (356)
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 4556899999999999999997544
No 459
>PRK10401 DNA-binding transcriptional regulator GalS; Provisional
Probab=48.36 E-value=1.2e+02 Score=28.56 Aligned_cols=73 Identities=11% Similarity=0.053 Sum_probs=38.2
Q ss_pred ChhhHHHHHhccccccccccCC-CCCCcHHHHHHHHHHH-------------hcCCCCceEEecCCCCCCCChHHHHHHH
Q 045431 20 PQEEKIAYKTKVSRNGNLGKLQ-AGYLFPEIARRKAAHM-------------LKYPDAEVISLGIGDTTEPIPEVITSAL 85 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~l~-~g~~~~~~~~~~~~~~-------------~~~~~~~~i~l~~g~~~~~~~~~~~~a~ 85 (433)
.+++++|+..|||++|+-..|. .+.+..+..++..... ........|-+-.....-+.-..+.+.+
T Consensus 2 ~ti~dIA~~aGVS~~TVSrvLn~~~~Vs~~tr~kV~~~a~elgY~pn~~a~~l~~~~~~~Igvi~~~~~~~f~~~l~~gi 81 (346)
T PRK10401 2 ITIRDVARQAGVSVATVSRVLNNSALVSADTREAVMKAVSELGYRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAV 81 (346)
T ss_pred CCHHHHHHHhCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHhhcCCCCEEEEEeCCCCCccHHHHHHHH
Confidence 4689999999999999755443 2344443332221111 0111123444433332234455667777
Q ss_pred HHHHhhc
Q 045431 86 AKRSYAL 92 (433)
Q Consensus 86 ~~~~~~~ 92 (433)
.+.+.+.
T Consensus 82 ~~~~~~~ 88 (346)
T PRK10401 82 DLVAQQH 88 (346)
T ss_pred HHHHHHC
Confidence 7766653
No 460
>TIGR00721 tfx DNA-binding protein, Tfx family. Tfx from Methanobacterium thermoautotrophicum is associated with the operon for molybdenum formyl-methanofuran dehydrogenase and binds a DNA sequence near its promoter.
Probab=48.29 E-value=15 Score=29.48 Aligned_cols=17 Identities=24% Similarity=0.270 Sum_probs=15.3
Q ss_pred hhhHHHHHhcccccccc
Q 045431 21 QEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~ 37 (433)
++.++|+.+|+|++++-
T Consensus 23 Tq~EIAe~LgiS~stV~ 39 (137)
T TIGR00721 23 SQKEIAKELKTTRANVS 39 (137)
T ss_pred CHHHHHHHHCcCHHHHH
Confidence 68999999999999864
No 461
>TIGR01481 ccpA catabolite control protein A. Catabolite control protein A is a LacI family global transcriptional regulator found in Gram-positive bacteria. CcpA is involved in repressing carbohydrate utilization genes [ex: alpha-amylase (amyE), acetyl-coenzyme A synthase (acsA)] and in activating genes involved in transporting excess carbon from the cell [ex: acetate kinase (ackA), alpha-acetolactate synthase (alsS)]. Additionally, disruption of CcpA in Bacillus megaterium, Staphylococcus xylosus, Lactobacillus casei and Lactocacillus pentosus also decreases growth rate, which suggests CcpA is involved in the regulation of other metabolic pathways.
Probab=47.94 E-value=1e+02 Score=28.57 Aligned_cols=29 Identities=14% Similarity=-0.015 Sum_probs=20.5
Q ss_pred ChhhHHHHHhccccccccccCC-CCCCcHH
Q 045431 20 PQEEKIAYKTKVSRNGNLGKLQ-AGYLFPE 48 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~l~-~g~~~~~ 48 (433)
++++++|+..|||.+|+-..|. .+.+..+
T Consensus 2 ~ti~dIA~~agvS~~TVSrvLn~~~~vs~~ 31 (329)
T TIGR01481 2 VTIYDVAREAGVSMATVSRVVNGNPNVKPA 31 (329)
T ss_pred CcHHHHHHHhCCCHHHHHHHhCCCCCCCHH
Confidence 4689999999999999754443 2344443
No 462
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=47.87 E-value=11 Score=35.63 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|++||+++|+|-.-+
T Consensus 287 d~~A~~Ir~iA~e~~VPiven~pLA 311 (342)
T TIGR01404 287 DAQALAVRAYAEEAGIPVVRDIPLA 311 (342)
T ss_pred cHHHHHHHHHHHHcCCCEeeCHHHH
Confidence 4556899999999999999996544
No 463
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=47.75 E-value=43 Score=31.98 Aligned_cols=26 Identities=27% Similarity=0.604 Sum_probs=23.8
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
|.|..++.+++++|++.|+++||-||
T Consensus 78 ~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 78 PYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred ccCceECHHHHHHHHHHHHHcCCEEE
Confidence 45778999999999999999999988
No 464
>PF13404 HTH_AsnC-type: AsnC-type helix-turn-helix domain; PDB: 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2VC1_B 2QZ8_A 2W29_C 2IVM_B 2VBX_B ....
Probab=47.66 E-value=4.6 Score=24.93 Aligned_cols=26 Identities=8% Similarity=-0.066 Sum_probs=17.9
Q ss_pred cccccCCChhhHHHHHhcccccccccc
Q 045431 13 VCKCVAAPQEEKIAYKTKVSRNGNLGK 39 (433)
Q Consensus 13 l~~g~~LPs~r~la~~~~vs~~t~~~~ 39 (433)
|....+.| .+++|+.+|+|.+|+..+
T Consensus 12 Lq~d~r~s-~~~la~~lglS~~~v~~R 37 (42)
T PF13404_consen 12 LQEDGRRS-YAELAEELGLSESTVRRR 37 (42)
T ss_dssp HHH-TTS--HHHHHHHHTS-HHHHHHH
T ss_pred HHHcCCcc-HHHHHHHHCcCHHHHHHH
Confidence 34445655 899999999999987654
No 465
>PF04967 HTH_10: HTH DNA binding domain; InterPro: IPR007050 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. This entry represents the HTH DNA binding domain found in Halobacterium salinarium (Halobacterium halobium) and described as a putative bacterio-opsin activator.
Probab=46.51 E-value=4.7 Score=26.35 Aligned_cols=20 Identities=20% Similarity=0.179 Sum_probs=16.5
Q ss_pred hhhHHHHHhccccccccccC
Q 045431 21 QEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l 40 (433)
+..+||+.||||++|+...+
T Consensus 25 tl~elA~~lgis~st~~~~L 44 (53)
T PF04967_consen 25 TLEELAEELGISKSTVSEHL 44 (53)
T ss_pred CHHHHHHHhCCCHHHHHHHH
Confidence 57899999999999965544
No 466
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=46.42 E-value=19 Score=34.05 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|++||+++++|-.-+
T Consensus 288 ~~~A~~I~~~A~~~~vPi~~~~~LA 312 (347)
T TIGR00328 288 DELALKIKEIARENNVPIVENPPLA 312 (347)
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 3456899999999999999997654
No 467
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=46.28 E-value=6.3 Score=24.65 Aligned_cols=22 Identities=18% Similarity=0.084 Sum_probs=17.3
Q ss_pred hhhHHHHHhccccccccccCCC
Q 045431 21 QEEKIAYKTKVSRNGNLGKLQA 42 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l~~ 42 (433)
+..+.|+.+|||++|++.-...
T Consensus 3 t~~e~a~~lgis~~ti~~~~~~ 24 (49)
T TIGR01764 3 TVEEAAEYLGVSKDTVYRLIHE 24 (49)
T ss_pred CHHHHHHHHCCCHHHHHHHHHc
Confidence 5689999999999997754433
No 468
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=45.90 E-value=1.6e+02 Score=27.47 Aligned_cols=39 Identities=21% Similarity=0.117 Sum_probs=30.7
Q ss_pred CCccccCCCHHHHHHHHHHHHH-cCCEEEEeccccccccC
Q 045431 215 NNPTGAAATREQLTRLVQFAKD-NGSIIVYDSAYALYISD 253 (433)
Q Consensus 215 ~nPtG~~~~~~~~~~i~~~a~~-~~~~li~De~~~~~~~~ 253 (433)
+|--|.+.+.+..+.|++-..+ -.+.+|+|.+|++-..+
T Consensus 172 ~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgliD 211 (362)
T KOG1546|consen 172 HNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGLID 211 (362)
T ss_pred ccccccccchHHHHHHHhccCCCceEEEEeecccCCCccc
Confidence 7888999999999999886653 24689999999975443
No 469
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=45.71 E-value=1.7e+02 Score=25.57 Aligned_cols=96 Identities=14% Similarity=0.343 Sum_probs=58.0
Q ss_pred CCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCCC
Q 045431 124 IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLSTV 203 (433)
Q Consensus 124 ~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (433)
.+-..|++..|+..+.-=+..+++.|..|.+-.|....-...+...+ ++..+. ..+..+ ..
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~-------------~i~~~~----~~~~~~--~~ 70 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEG-------------KIKWIE----REFDAE--DL 70 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhc-------------Ccchhh----cccChh--hh
Confidence 44567899999999888888899999999999999833222222222 111111 122222 12
Q ss_pred CCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE-Eecc
Q 045431 204 ARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV-YDSA 246 (433)
Q Consensus 204 ~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li-~De~ 246 (433)
.+..+++.+++ | .+.=++|.+.|+++++++= +|+.
T Consensus 71 ~~~~lviaAt~-d-------~~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 71 DDAFLVIAATD-D-------EELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred cCceEEEEeCC-C-------HHHHHHHHHHHHHhCCceeccCCc
Confidence 23444444322 2 3445899999999997754 5554
No 470
>TIGR00498 lexA SOS regulatory protein LexA. LexA acts as a homodimer to repress a number of genes involved in the response to DNA damage (SOS response), including itself and RecA. RecA, in the presence of single-stranded DNA, acts as a co-protease to activate a latent autolytic protease activity (EC 3.4.21.88) of LexA, where the active site Ser is part of LexA. The autolytic cleavage site is an Ala-Gly bond in LexA (at position 84-85 in E. coli LexA; this sequence is replaced by Gly-Gly in Synechocystis). The cleavage leads to derepression of the SOS regulon and eventually to DNA repair. LexA in Bacillus subtilis is called DinR. LexA is much less broadly distributed than RecA.
Probab=45.67 E-value=4.9 Score=34.70 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=21.7
Q ss_pred ChhhHHHHHhccc-cccccccC---C-CCCCcH
Q 045431 20 PQEEKIAYKTKVS-RNGNLGKL---Q-AGYLFP 47 (433)
Q Consensus 20 Ps~r~la~~~~vs-~~t~~~~l---~-~g~~~~ 47 (433)
|+.|+||+.++++ ++|+...+ . .||+..
T Consensus 26 ~~~~ela~~~~~~s~~tv~~~l~~L~~~g~i~~ 58 (199)
T TIGR00498 26 PSIREIARAVGLRSPSAAEEHLKALERKGYIER 58 (199)
T ss_pred CcHHHHHHHhCCCChHHHHHHHHHHHHCCCEec
Confidence 8899999999998 99976543 2 366554
No 471
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=45.61 E-value=2.6e+02 Score=26.12 Aligned_cols=151 Identities=12% Similarity=0.112 Sum_probs=80.6
Q ss_pred ChHHHHHHHHHHHhhcccCCCCCCCCCCCCCHHHHHHHHHHHhccCCCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeC
Q 045431 77 IPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQD 156 (433)
Q Consensus 77 ~~~~~~~a~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~l~~~~~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~ 156 (433)
.-....+-+.+++...+....-..|....|....-..|++.+ ..+...++++-++..+=.++.+.-. --|++..
T Consensus 43 aLd~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql----~~~~~dviv~i~tp~Aq~~~s~~~~--iPVV~aa 116 (322)
T COG2984 43 ALDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQL----VGDKPDVIVAIATPAAQALVSATKT--IPVVFAA 116 (322)
T ss_pred hHHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHh----hcCCCcEEEecCCHHHHHHHHhcCC--CCEEEEc
Confidence 345666677777776543222346767889999999999887 3444467777777666554433332 2233322
Q ss_pred CCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCC----CCCCccEE-EEcCCCCccccCCCHHHHHHHH
Q 045431 157 PSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLS----TVARTDII-FFCSPNNPTGAAATREQLTRLV 231 (433)
Q Consensus 157 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i-~l~~p~nPtG~~~~~~~~~~i~ 231 (433)
-+-+--..........+ .++..+.-. ......++ ..++.+-| ++.+|+-+- |...++++.
T Consensus 117 vtd~v~a~Lv~~~~~pg---------~NvTGvsD~--~~v~q~i~lik~~~Pnak~Igv~Y~p~E~n----s~~l~eelk 181 (322)
T COG2984 117 VTDPVGAKLVKSLEQPG---------GNVTGVSDL--LPVAQQIELIKALLPNAKSIGVLYNPGEAN----SVSLVEELK 181 (322)
T ss_pred cCchhhccCCccccCCC---------CceeecCCc--chHHHHHHHHHHhCCCCeeEEEEeCCCCcc----cHHHHHHHH
Confidence 22111111111111100 133333211 00111111 13666554 666775433 456789999
Q ss_pred HHHHHcCCEEEEecccc
Q 045431 232 QFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 232 ~~a~~~~~~li~De~~~ 248 (433)
+.+++.|+-+++=.+-.
T Consensus 182 ~~A~~~Gl~vve~~v~~ 198 (322)
T COG2984 182 KEARKAGLEVVEAAVTS 198 (322)
T ss_pred HHHHHCCCEEEEEecCc
Confidence 99999999999765533
No 472
>PRK10727 DNA-binding transcriptional regulator GalR; Provisional
Probab=45.22 E-value=1.3e+02 Score=28.19 Aligned_cols=31 Identities=10% Similarity=-0.109 Sum_probs=22.0
Q ss_pred ChhhHHHHHhccccccccccCC-CCCCcHHHH
Q 045431 20 PQEEKIAYKTKVSRNGNLGKLQ-AGYLFPEIA 50 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~l~-~g~~~~~~~ 50 (433)
+.++++|+..|||.+|+-..|. .+.+..+..
T Consensus 2 ~ti~dIA~~aGVS~~TVSrvLn~~~~Vs~~tr 33 (343)
T PRK10727 2 ATIKDVARLAGVSVATVSRVINNSPKASEASR 33 (343)
T ss_pred CCHHHHHHHhCCCHHHHHHHhCCCCCCCHHHH
Confidence 5789999999999999755443 244544433
No 473
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=45.19 E-value=20 Score=25.94 Aligned_cols=25 Identities=32% Similarity=0.391 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHcCCEEEEeccccc
Q 045431 225 EQLTRLVQFAKDNGSIIVYDSAYAL 249 (433)
Q Consensus 225 ~~~~~i~~~a~~~~~~li~De~~~~ 249 (433)
+.-++|.++|+++|+++++|..-+.
T Consensus 27 ~~A~~I~~~A~e~~VPi~~~~~LAr 51 (82)
T TIGR00789 27 EVAERIIEIAKKHGIPIVEDPDLVD 51 (82)
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHHH
Confidence 4468999999999999999987654
No 474
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=44.74 E-value=21 Score=33.80 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|++||+++|+|-.-+
T Consensus 288 d~~A~~Ir~iA~e~~VPiven~pLA 312 (349)
T PRK12721 288 DAQALHIVKLAERNGIPVVENIPLA 312 (349)
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 3456799999999999999996543
No 475
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=44.70 E-value=1.8e+02 Score=26.89 Aligned_cols=20 Identities=25% Similarity=0.152 Sum_probs=16.7
Q ss_pred hhhHHHHHhccccccccccC
Q 045431 21 QEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l 40 (433)
+++++|+..|||++|+-..|
T Consensus 2 ti~dIA~~aGVS~~TVSrvL 21 (328)
T PRK11303 2 KLDEIARLAGVSRTTASYVI 21 (328)
T ss_pred CHHHHHHHhCCCHHHHHHHH
Confidence 47899999999999975544
No 476
>smart00642 Aamy Alpha-amylase domain.
Probab=44.49 E-value=31 Score=28.77 Aligned_cols=27 Identities=26% Similarity=0.330 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeccccc
Q 045431 223 TREQLTRLVQFAKDNGSIIVYDSAYAL 249 (433)
Q Consensus 223 ~~~~~~~i~~~a~~~~~~li~De~~~~ 249 (433)
+.++++++++.|+++|+-||.|-+...
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 368999999999999999999998774
No 477
>PF00356 LacI: Bacterial regulatory proteins, lacI family; InterPro: IPR000843 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. One such family groups together a range of proteins, including ascG, ccpA, cytR, ebgR, fruR, galR, galS, lacI, malI, opnR, purF, rafR, rbtR and scrR [, ]. Within this family, the HTH motif is situated towards the N terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 3KJX_C 1ZAY_A 1VPW_A 2PUA_A 1QQA_A 1PNR_A 1JFT_A 1QP4_A 2PUD_A 1JH9_A ....
Probab=44.05 E-value=20 Score=22.61 Aligned_cols=19 Identities=21% Similarity=0.097 Sum_probs=15.3
Q ss_pred hhhHHHHHhcccccccccc
Q 045431 21 QEEKIAYKTKVSRNGNLGK 39 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~ 39 (433)
+++++|+..|||.+|+-..
T Consensus 1 Ti~dIA~~agvS~~TVSr~ 19 (46)
T PF00356_consen 1 TIKDIAREAGVSKSTVSRV 19 (46)
T ss_dssp CHHHHHHHHTSSHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHH
Confidence 3679999999999996543
No 478
>PF07453 NUMOD1: NUMOD1 domain; InterPro: IPR010896 This helix-turn-helix-containing DNA-binding domain is found associated in homing nucleases [].
Probab=43.43 E-value=13 Score=22.01 Aligned_cols=20 Identities=10% Similarity=-0.102 Sum_probs=17.4
Q ss_pred cCCChhhHHHHHhccccccc
Q 045431 17 VAAPQEEKIAYKTKVSRNGN 36 (433)
Q Consensus 17 ~~LPs~r~la~~~~vs~~t~ 36 (433)
..-+|.++.|..|+++++++
T Consensus 14 ~~F~Si~eAa~~l~i~~~~I 33 (37)
T PF07453_consen 14 KSFDSIREAARYLGISHSTI 33 (37)
T ss_pred EEEcCHHHHHHHhCCCHHHH
Confidence 45789999999999999874
No 479
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=43.14 E-value=92 Score=23.40 Aligned_cols=86 Identities=16% Similarity=0.330 Sum_probs=52.0
Q ss_pred CCCCCcEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCCCC
Q 045431 123 GIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDLST 202 (433)
Q Consensus 123 ~~~~~~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (433)
..+...|++..|+..+..-+..+++.|-+|.+.+|.. ...+ +. .+. .. ..+..+
T Consensus 4 ~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~----~~~~--~~-----------i~~--~~----~~~~~~--- 57 (103)
T PF13241_consen 4 DLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI----EFSE--GL-----------IQL--IR----REFEED--- 57 (103)
T ss_dssp --TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE----HHHH--TS-----------CEE--EE----SS-GGG---
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch----hhhh--hH-----------HHH--Hh----hhHHHH---
Confidence 4455688888888888888999999999998888876 1111 21 121 11 122111
Q ss_pred CCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 203 VARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 203 ~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
..+..+|+.+ +.+ .+.-++|.+.|+++++++-
T Consensus 58 l~~~~lV~~a-t~d-------~~~n~~i~~~a~~~~i~vn 89 (103)
T PF13241_consen 58 LDGADLVFAA-TDD-------PELNEAIYADARARGILVN 89 (103)
T ss_dssp CTTESEEEE--SS--------HHHHHHHHHHHHHTTSEEE
T ss_pred HhhheEEEec-CCC-------HHHHHHHHHHHhhCCEEEE
Confidence 2345555543 333 3445889999999998865
No 480
>PF08279 HTH_11: HTH domain; InterPro: IPR013196 Winged helix DNA-binding proteins share a related winged helix-turn-helix DNA-binding motif, where the "wings", or loops, are small beta-sheets. The winged helix motif consists of two wings (W1, W2), three alpha helices (H1, H2, H3) and three beta-sheets (S1, S2, S3) arranged in the order H1-S1-H2-H3-S2-W1-S3-W2 []. The DNA-recognition helix makes sequence-specific DNA contacts with the major groove of DNA, while the wings make different DNA contacts, often with the minor groove or the backbone of DNA. Several winged-helix proteins display an exposed patch of hydrophobic residues thought to mediate protein-protein interactions. This entry represents a subset of the winged helix domain superfamily which is predominantly found in bacterial proteins, though there are also some archaeal and eukaryotic examples. This domain is commonly found in the biotin (vitamin H) repressor protein BirA which regulates transcription of the biotin operon []. It is also found in other proteins including regulators of amino acid biosynthsis such as LysM [], and regulators of carbohydrate metabolisms such as LicR and FrvR [, ].; PDB: 1HXD_B 2EWN_B 1BIA_A 1BIB_A 1J5Y_A 3V7S_A 3V7C_A 3RKW_A 3RIR_A 3RKX_A ....
Probab=42.90 E-value=8.7 Score=25.04 Aligned_cols=20 Identities=20% Similarity=0.087 Sum_probs=16.1
Q ss_pred ChhhHHHHHhcccccccccc
Q 045431 20 PQEEKIAYKTKVSRNGNLGK 39 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~~ 39 (433)
-+..+||+.++||+.|++..
T Consensus 16 it~~eLa~~l~vS~rTi~~~ 35 (55)
T PF08279_consen 16 ITAKELAEELGVSRRTIRRD 35 (55)
T ss_dssp BEHHHHHHHCTS-HHHHHHH
T ss_pred cCHHHHHHHhCCCHHHHHHH
Confidence 56889999999999997643
No 481
>smart00354 HTH_LACI helix_turn _helix lactose operon repressor.
Probab=42.41 E-value=23 Score=24.57 Aligned_cols=18 Identities=17% Similarity=0.058 Sum_probs=15.4
Q ss_pred ChhhHHHHHhcccccccc
Q 045431 20 PQEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~ 37 (433)
++++++|+.+|||++|+-
T Consensus 1 ~t~~~iA~~~gvS~~TVS 18 (70)
T smart00354 1 ATIKDVARLAGVSKATVS 18 (70)
T ss_pred CCHHHHHHHHCCCHHHHH
Confidence 468999999999999964
No 482
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=41.91 E-value=12 Score=23.51 Aligned_cols=19 Identities=26% Similarity=0.011 Sum_probs=14.0
Q ss_pred ChhhHHHHHhccccccccc
Q 045431 20 PQEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 20 Ps~r~la~~~~vs~~t~~~ 38 (433)
-|+|+.|+.+||+++|.+.
T Consensus 17 ~S~r~AA~~ygVp~sTL~~ 35 (45)
T PF05225_consen 17 MSIRKAAKKYGVPRSTLRR 35 (45)
T ss_dssp S-HHHHHHHHT--HHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHH
Confidence 4699999999999999664
No 483
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=41.84 E-value=18 Score=34.25 Aligned_cols=58 Identities=19% Similarity=0.327 Sum_probs=33.4
Q ss_pred eEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 184 KIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
+...+.+.++.+|..++...+...-.--..++.+ |..|+.+++++|++.|+++||-||
T Consensus 33 N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 33 NVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred cEEEEEEecCCCCccccCCCccccccCccccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 5555555555555555443221111000012213 449999999999999999999888
No 484
>COG3415 Transposase and inactivated derivatives [DNA replication, recombination, and repair]
Probab=41.76 E-value=10 Score=30.49 Aligned_cols=18 Identities=17% Similarity=-0.044 Sum_probs=16.4
Q ss_pred hhhHHHHHhccccccccc
Q 045431 21 QEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~ 38 (433)
|.|++|+.+|||.+|+|.
T Consensus 23 S~re~Ak~~gvs~sTvy~ 40 (138)
T COG3415 23 SCREAAKRFGVSISTVYR 40 (138)
T ss_pred cHHHHHHHhCccHHHHHH
Confidence 799999999999999764
No 485
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=41.49 E-value=26 Score=33.43 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|+++|+++++|-.-+
T Consensus 295 ~~~A~~i~~~A~~~~vpi~~~~~LA 319 (359)
T PRK05702 295 DEVALKIREIAREHNVPIVENPPLA 319 (359)
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 3456889999999999999997544
No 486
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=40.88 E-value=81 Score=29.44 Aligned_cols=53 Identities=23% Similarity=0.328 Sum_probs=34.4
Q ss_pred eEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 184 KIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
++....+.++.+|..+....+... - . ...|..++.+++++|++.|+++||-||
T Consensus 33 N~lh~HltDd~~~rle~~~~P~lt--~---~-g~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 33 NVFHWHLTDDQGFRIESKKYPKLQ--Q---K-ASDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred eEEEEEEecCCCceeecCCCcccc--c---c-CCCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 555666555555655444322211 0 0 113567999999999999999999888
No 487
>PF06056 Terminase_5: Putative ATPase subunit of terminase (gpP-like); InterPro: IPR010332 This family of proteins are annotated as ATPase subunits of phage terminase after []. Terminases are viral proteins that are involved in packaging viral DNA into the capsid.; GO: 0005524 ATP binding, 0019069 viral capsid assembly
Probab=40.87 E-value=11 Score=25.18 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=15.2
Q ss_pred hhhHHHHHhccccccccc
Q 045431 21 QEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~ 38 (433)
++.++|+.|||+++|+++
T Consensus 15 ~~~eIA~~Lg~~~~TV~~ 32 (58)
T PF06056_consen 15 SIKEIAEELGVPRSTVYS 32 (58)
T ss_pred CHHHHHHHHCCChHHHHH
Confidence 367999999999999763
No 488
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=40.02 E-value=71 Score=30.37 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=35.4
Q ss_pred eEEEeecCccCCcccCCCCCCCccEEEEcCCCCccccCCCHHHHHHHHHHHHHcCCEEE
Q 045431 184 KIEYMRCTAENGFFPDLSTVARTDIIFFCSPNNPTGAAATREQLTRLVQFAKDNGSIIV 242 (433)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~p~nPtG~~~~~~~~~~i~~~a~~~~~~li 242 (433)
+...+.+.++.+|..++...+...- .-....|..++.+++++|++.|+++||-||
T Consensus 33 N~lh~HltDd~~~rle~~~~P~Lt~----~ga~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 33 NVLHWHITDSQSFPLESPSYPELSK----KGAYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred cEEEEeEEcCCCceEeeCCCchhhh----ccCcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 5556665555555555443222110 001234677999999999999999999988
No 489
>PF02954 HTH_8: Bacterial regulatory protein, Fis family; InterPro: IPR002197 The Factor for Inversion Stimulation (FIS) protein is a regulator of bacterial functions, and binds specifically to weakly related DNA sequences [,]. It activates ribosomal RNA transcription, and is involved in upstream activation of rRNA promoters. The protein has been shown to play a role in the regulation of virulence factors in both Salmonella typhimurium and Escherichia coli []. Some of its functions include inhibition of the initiation of DNA replication from the OriC site, and promotion of Hin-mediated DNA inversion. In its C-terminal extremity, FIS encodes a helix-turn-helix (HTH) DNA- binding motif, which shares a high degree of similarity with other HTH motifs of more primitive bacterial transcriptional regulators, such as the nitrogen assimilation regulatory proteins (NtrC) from species like Azobacter, Rhodobacter and Rhizobium. This has led to speculation that both evolved from a single common ancestor []. The 3-dimensional structure of the E. coli FIS DNA-binding protein has been determined by means of X-ray diffraction to 2.0A resolution [,]. FIS is composed of four alpha-helices tightly intertwined to form a globular dimer with two protruding HTH motifs. The 24 N-terminal amino acids are poorly defined, indicating that they might act as `feelers' suitable for DNA or protein (invertase) recognition []. Other proteins belonging to this subfamily include: E. coli: atoC, hydG, ntrC, fhlA, tyrR, Rhizobium spp.: ntrC, nifA, dctD ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NTC_A 3JRH_A 3JRB_A 3IV5_A 3JRI_A 1ETQ_A 1ETW_B 1ETY_A 3JRF_A 3JRA_A ....
Probab=39.75 E-value=7.3 Score=23.94 Aligned_cols=19 Identities=32% Similarity=0.163 Sum_probs=14.9
Q ss_pred hhHHHHHhccccccccccC
Q 045431 22 EEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 22 ~r~la~~~~vs~~t~~~~l 40 (433)
+.+.|+.||+|++|.+.++
T Consensus 21 ~~~aA~~Lgisr~tL~~kl 39 (42)
T PF02954_consen 21 VSKAARLLGISRRTLYRKL 39 (42)
T ss_dssp HHHHHHHHTS-HHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHH
Confidence 4688999999999987654
No 490
>cd04762 HTH_MerR-trunc Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins. Proteins in this family mostly have a truncated helix-turn-helix (HTH) MerR-like domain. They lack a portion of the C-terminal region, called Wing 2 and the long dimerization helix that is typically present in MerR-like proteins. These truncated domains are found in response regulator receiver (REC) domain proteins (i.e., CheY), cytosine-C5 specific DNA methylases, IS607 transposase-like proteins, and RacA, a bacterial protein that anchors chromosomes to cell poles.
Probab=39.58 E-value=8.6 Score=23.90 Aligned_cols=19 Identities=16% Similarity=-0.146 Sum_probs=15.7
Q ss_pred hhhHHHHHhcccccccccc
Q 045431 21 QEEKIAYKTKVSRNGNLGK 39 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~ 39 (433)
+..++|+.++||++|++.-
T Consensus 2 s~~e~a~~lgvs~~tl~~~ 20 (49)
T cd04762 2 TTKEAAELLGVSPSTLRRW 20 (49)
T ss_pred CHHHHHHHHCcCHHHHHHH
Confidence 4689999999999997543
No 491
>PLN03244 alpha-amylase; Provisional
Probab=39.20 E-value=51 Score=34.81 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=30.2
Q ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Q 045431 217 PTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYISD 253 (433)
Q Consensus 217 PtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~~ 253 (433)
|+...-++++++++++.|++.|+-||.|=+|..+..+
T Consensus 433 pssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 433 ASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 3334446899999999999999999999999876543
No 492
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=38.88 E-value=37 Score=35.11 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=28.8
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHcCCEEEEecccccc
Q 045431 213 SPNNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALY 250 (433)
Q Consensus 213 ~p~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~ 250 (433)
+|+.|++ ..++++++++.|+++|+-||.|-+|...
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 4555544 2689999999999999999999998764
No 493
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=38.74 E-value=39 Score=34.37 Aligned_cols=104 Identities=14% Similarity=0.208 Sum_probs=58.1
Q ss_pred cEEEcCChHHHHHHHHHhcCCCCEEEEeCCCChhhhhhHHHhCCcccccccccccceEEEeecCccCCcccCC-C--CCC
Q 045431 128 DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFPDL-S--TVA 204 (433)
Q Consensus 128 ~i~~~~G~~~al~~l~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~ 204 (433)
-|+.|.|+.+..+.+-+++.+| ..++.+|--.-..+....+...|+ .+..+.......-.... . ...
T Consensus 37 vvmPTGgGKSlCyQiPAll~~G-~TLVVSPLiSLM~DQV~~l~~~Gi---------~A~~lnS~l~~~e~~~v~~~l~~g 106 (590)
T COG0514 37 VVMPTGGGKSLCYQIPALLLEG-LTLVVSPLISLMKDQVDQLEAAGI---------RAAYLNSTLSREERQQVLNQLKSG 106 (590)
T ss_pred EEccCCCCcchHhhhHHHhcCC-CEEEECchHHHHHHHHHHHHHcCc---------eeehhhcccCHHHHHHHHHHHhcC
Confidence 4567888888888899998888 556667776666666665554432 33333322110000000 1 124
Q ss_pred CccEEEEcCC---CCccccCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Q 045431 205 RTDIIFFCSP---NNPTGAAATREQLTRLVQFAKDNGSIIVYDSAYALYIS 252 (433)
Q Consensus 205 ~~~~i~l~~p---~nPtG~~~~~~~~~~i~~~a~~~~~~li~De~~~~~~~ 252 (433)
..+++|+ +| .+| . ..+.++ +-.=.++++||+|.-..+
T Consensus 107 ~~klLyi-sPErl~~~-------~-f~~~L~--~~~i~l~vIDEAHCiSqW 146 (590)
T COG0514 107 QLKLLYI-SPERLMSP-------R-FLELLK--RLPISLVAIDEAHCISQW 146 (590)
T ss_pred ceeEEEE-CchhhcCh-------H-HHHHHH--hCCCceEEechHHHHhhc
Confidence 5787776 45 233 2 333333 223468999999975433
No 494
>PRK12773 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=38.72 E-value=19 Score=36.45 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEecccc
Q 045431 224 REQLTRLVQFAKDNGSIIVYDSAYA 248 (433)
Q Consensus 224 ~~~~~~i~~~a~~~~~~li~De~~~ 248 (433)
.+.-.+|.++|++||+++|+|-.-+
T Consensus 587 D~lAlrIReiAeE~gVPIVENpPLA 611 (646)
T PRK12773 587 DDFALLIIRIARENGVPTVEDRLQA 611 (646)
T ss_pred cHHHHHHHHHHHHcCCcEEECHHHH
Confidence 4556899999999999999997544
No 495
>PRK10423 transcriptional repressor RbsR; Provisional
Probab=38.67 E-value=1.5e+02 Score=27.31 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=19.5
Q ss_pred hhHHHHHhccccccccccCC-CCCCcHHHH
Q 045431 22 EEKIAYKTKVSRNGNLGKLQ-AGYLFPEIA 50 (433)
Q Consensus 22 ~r~la~~~~vs~~t~~~~l~-~g~~~~~~~ 50 (433)
++++|+..|||++|+-..|. .+.+..+..
T Consensus 1 i~dIA~~agVS~~TVSrvLn~~~~vs~~tr 30 (327)
T PRK10423 1 MKDVARLAGVSTSTVSHVINKDRFVSEAIT 30 (327)
T ss_pred ChhHHHHhCCcHHHHHHHhCCCCCCCHHHH
Confidence 47899999999999755443 234444433
No 496
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=38.34 E-value=1.8e+02 Score=23.44 Aligned_cols=22 Identities=9% Similarity=0.197 Sum_probs=17.9
Q ss_pred CChHHHHHHHHHcCCeEecCCC
Q 045431 379 RSSWDVFSEILEKTHVVTTPGS 400 (433)
Q Consensus 379 ~~~~~~~~~l~~~~gi~v~~g~ 400 (433)
-+..+++..|++++|..|.+..
T Consensus 45 aD~NeVLkALc~eAGw~Ve~DG 66 (150)
T PF05687_consen 45 ADNNEVLKALCREAGWTVEPDG 66 (150)
T ss_pred CCHHHHHHHHHHhCCEEEccCC
Confidence 3667899999999999997643
No 497
>PF13518 HTH_28: Helix-turn-helix domain
Probab=38.28 E-value=14 Score=23.55 Aligned_cols=17 Identities=24% Similarity=0.198 Sum_probs=15.6
Q ss_pred hhhHHHHHhcccccccc
Q 045431 21 QEEKIAYKTKVSRNGNL 37 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~ 37 (433)
|.+++|..++||++|++
T Consensus 14 s~~~~a~~~gis~~tv~ 30 (52)
T PF13518_consen 14 SVREIAREFGISRSTVY 30 (52)
T ss_pred CHHHHHHHHCCCHhHHH
Confidence 89999999999999964
No 498
>TIGR02531 yecD_yerC TrpR-related protein YerC/YecD. This model represents a protein subfamily found mostly in the Firmicutes (Bacillus and allies). This family is similar in sequence to the trp operon repressor TrpR described by TIGR01321, and represents a distinct clade within the broader family described by pfam01371. At least one species, Xylella fastidiosa, in the Proteobacteria, has a member of both this family and TIGR01321. Several genomes with a member of this family do not synthesize tryptophan, and members of this family should not be considered trp operon repressors without new evidence.
Probab=38.13 E-value=12 Score=27.49 Aligned_cols=18 Identities=17% Similarity=-0.049 Sum_probs=16.7
Q ss_pred hhhHHHHHhccccccccc
Q 045431 21 QEEKIAYKTKVSRNGNLG 38 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~ 38 (433)
|.+++|+.+|||++|++.
T Consensus 52 S~~eIA~~LgISrsTIyR 69 (88)
T TIGR02531 52 TYSDIEAETGASTATISR 69 (88)
T ss_pred CHHHHHHHHCcCHHHHHH
Confidence 899999999999999875
No 499
>PRK03975 tfx putative transcriptional regulator; Provisional
Probab=37.37 E-value=33 Score=27.76 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=34.2
Q ss_pred hhhHHHHHhccccccccccCCCCCCcHHHHHHHH--HHHhcCCCCceEEecCCCCCCCChHHHHHHHHH
Q 045431 21 QEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKA--AHMLKYPDAEVISLGIGDTTEPIPEVITSALAK 87 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l~~g~~~~~~~~~~~--~~~~~~~~~~~i~l~~g~~~~~~~~~~~~a~~~ 87 (433)
|+.++|+.+|+|++|+-..... ....+.+... .+......+..+.+..|.--+..|+.+.+...+
T Consensus 23 Tq~EIAe~LGiS~~tVs~ie~r--a~kkLr~~~~tl~~~~~l~a~~~v~~~~G~d~~~ip~~v~~~~d~ 89 (141)
T PRK03975 23 TQQEIADILGTSRANVSSIEKR--ARENIEKARETLAFAETLNAPVRVTIPAGTDLFDIPKRIYKEADE 89 (141)
T ss_pred CHHHHHHHHCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCeEEEecCCCcHHHhHHHHHHHhhH
Confidence 5889999999999885321110 0111222111 122223334456666666445567766655554
No 500
>TIGR02417 fruct_sucro_rep D-fructose-responsive transcription factor. Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer.
Probab=37.32 E-value=2.6e+02 Score=25.81 Aligned_cols=20 Identities=20% Similarity=0.036 Sum_probs=16.4
Q ss_pred hhhHHHHHhccccccccccC
Q 045431 21 QEEKIAYKTKVSRNGNLGKL 40 (433)
Q Consensus 21 s~r~la~~~~vs~~t~~~~l 40 (433)
+++++|+..|||++|+-..|
T Consensus 1 ti~dIA~~aGVS~~TVSrvL 20 (327)
T TIGR02417 1 TLSDIAKLAGVSKTTASYVI 20 (327)
T ss_pred CHHHHHHHhCCCHHHHHHHH
Confidence 36899999999999975544
Done!