BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045433
         (167 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A7TST2|IML2_VANPO Mitochondrial outer membrane protein IML2 OS=Vanderwaltozyma
           polyspora (strain ATCC 22028 / DSM 70294) GN=IML2 PE=3
           SV=1
          Length = 728

 Score = 31.6 bits (70), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 9/76 (11%)

Query: 6   QHGPLHELEMVLLDLPSLLCFSTYT-------LLVLFSAEIYHQARSLSTNKLRPAYYIV 58
           Q+   ++L+   L  P  +   TYT       LL++FS      A++L   KLR AYY++
Sbjct: 109 QYAQKNDLKSSSLYAPGTVYAVTYTESCLLHALLMIFSESYVETAKALL--KLRKAYYML 166

Query: 59  NAIVYFIQRKQHTRGN 74
             I   +++ + T GN
Sbjct: 167 QEIFEEMKKVKQTNGN 182


>sp|Q3E989|PME54_ARATH Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis
           thaliana GN=PME54 PE=2 SV=1
          Length = 512

 Score = 30.4 bits (67), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 27  STYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYF 86
           STYTL     ++   +   +ST +LR A   +N       RK+HT+ +   W+  + ++ 
Sbjct: 99  STYTLPSPSVSDSCERLMKMSTRRLRQAMEALNGS----SRKRHTKHDVQTWLSAAMTFQ 154

Query: 87  ILCCIGILD 95
             C   ILD
Sbjct: 155 QACKDSILD 163


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.331    0.143    0.481 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,583,947
Number of Sequences: 539616
Number of extensions: 2232407
Number of successful extensions: 4063
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4063
Number of HSP's gapped (non-prelim): 3
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.6 bits)