BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045438
NKHLRWCRTSTTSPRPSHKPMLPPILSHLGFNKLATAAPSLSSDIVSEHFVPGLFTIHYL
RKLDFGTKIEMRSPGRCITVTFSESQNDTVSKVFIGGVEITRPDLFNDGIIFIHGIQGII
SPLPLLSCEGQRMTWLPFPFQPSDHGHYHWIEAQSPIMSLMLRDAMLRLQNSGFGMLSLA
MKLITLTAMTVFAFDNMSIFSSSPVYISNVRFHIVPNRYLRIGDLHRLPAGTTLPTLERG
QSLTVTRGGVVTGPFRINLVRIMVPDIMNSLKIIVYGVNLPFPHFGATAFDVHSIRLTDT
DGGEYFDGTKPTAAAGTNTVSNSLLTAVSTCSVVGVIAWGDFKFSKIPQRNVELKQVEII
EFH

High Scoring Gene Products

Symbol, full name Information P value
FLA21
AT5G06920
protein from Arabidopsis thaliana 5.0e-07
AT1G15190 protein from Arabidopsis thaliana 0.00057

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045438
        (363 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2169464 - symbol:FLA21 "AT5G06920" species:370...   142  5.0e-07   1
TAIR|locus:2037873 - symbol:AT1G15190 "AT1G15190" species...   112  0.00057   1


>TAIR|locus:2169464 [details] [associations]
            symbol:FLA21 "AT5G06920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006863 "purine nucleobase
            transport" evidence=RCA] Pfam:PF02469 InterPro:IPR000782
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005576 EMBL:AB010697
            Gene3D:2.30.180.10 SMART:SM00554 SUPFAM:SSF82153 PROSITE:PS50213
            UniGene:At.69266 IPI:IPI00545154 RefSeq:NP_196309.1
            UniGene:At.54756 ProteinModelPortal:Q9FL53 SMR:Q9FL53 PRIDE:Q9FL53
            EnsemblPlants:AT5G06920.1 GeneID:830583 KEGG:ath:AT5G06920
            GeneFarm:3820 TAIR:At5g06920 eggNOG:NOG308909 HOGENOM:HOG000091003
            InParanoid:Q9FL53 OMA:ICDANSS PhylomeDB:Q9FL53
            ProtClustDB:CLSN2916541 Genevestigator:Q9FL53 GermOnline:AT5G06920
            Uniprot:Q9FL53
        Length = 353

 Score = 142 (55.0 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 68/271 (25%), Positives = 116/271 (42%)

Query:    31 FNKLATAAPSLSSDIVSEHFVPGLFTIHYLRKLDFGTKIEMRSPGRCITVTFSESQNDTV 90
             FN  ++  P     ++  H +P + ++  L K   GT +      + + ++    ++ T 
Sbjct:    93 FNT-SSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTA 151

Query:    91 SKVFIGGVEITRPDLFNDXXXXXXXXXXXXSPLPLLSCEGQRMTWLPFPFQPSDHGHYHW 150
                 +  V IT PD+F              SPL   S        +  P   SD  +   
Sbjct:   152 E---VNHVRITHPDMFLGDSLVIHGVIGPFSPLQPHSDH-----LIHTPLCQSDTTNKTS 203

Query:   151 IEAQSPIMSLMLRDAMLRLQNSGF-----GMLSLAMKLIT-------LTAMTVFAFDNM- 197
                + P+     R   L L ++GF     G+ S+  +++        LT +T+ A  N+ 
Sbjct:   204 NNEEVPVSIDWTRIVQL-LSSNGFVPFAIGLHSVLNRIVNDHNHHKNLTGVTILATPNLV 262

Query:   198 SIFSSSPVYISNVRFHIVPNRYLRIGDLHRLPAGTTLPTLERGQSLTVTRGGVVT--GPF 255
             S+ S+SP     VR HI+  R L   D   +    T+ TL+  Q LT+TR  V +  G F
Sbjct:   263 SLSSASPFLYEVVRHHILVQR-LTYKDFASMSDKATVKTLDPYQDLTITRRNVNSSGGDF 321

Query:   256 RINLVRIMVPDIMNSLKIIVYGVN--LPFPH 284
              I+ V I+ PD+ +S   +++G++  L  PH
Sbjct:   322 MISGVEIVDPDMFSSSNFVIHGISHTLEIPH 352

 Score = 122 (48.0 bits), Expect = 9.0e-05, P = 9.0e-05
 Identities = 40/140 (28%), Positives = 74/140 (52%)

Query:   153 AQSPIMSLMLRDAMLRLQNSGFGMLSLAMKL---ITLTAM---TVFAFDNMSIFSSS--- 203
             + SP +SL   +A   L+ S F  ++  + +   I L++    T+FA ++ S F++S   
Sbjct:    43 SSSPSLSL---NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLH 99

Query:   204 PVYISNV-RFHIVPNRYLRIGDLHRLPAGTTLPTLERGQSLTVTRGGVVTGPFRINLVRI 262
             P+++  +  +H +P   L + DL + P GT LPTL   +S+ ++     +    +N VRI
Sbjct:   100 PLFLKQLLHYHTLP-LMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRI 158

Query:   263 MVPDIMNSLKIIVYGVNLPF 282
               PD+     ++++GV  PF
Sbjct:   159 THPDMFLGDSLVIHGVIGPF 178


>TAIR|locus:2037873 [details] [associations]
            symbol:AT1G15190 "AT1G15190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR000782 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005576 EMBL:AC007591 SMART:SM00554 SUPFAM:SSF82153
            PROSITE:PS50213 EMBL:AY924669 EMBL:AY800579 IPI:IPI00530315
            PIR:H86285 RefSeq:NP_172971.1 UniGene:At.20307 UniGene:At.51172
            UniGene:At.68762 ProteinModelPortal:Q5Q0H2
            EnsemblPlants:AT1G15190.1 GeneID:838085 KEGG:ath:AT1G15190
            GeneFarm:3817 TAIR:At1g15190 eggNOG:NOG278507 HOGENOM:HOG000214989
            InParanoid:Q5Q0H2 OMA:FANAIIT PhylomeDB:Q5Q0H2
            ProtClustDB:CLSN2914694 Genevestigator:Q5Q0H2 Uniprot:Q5Q0H2
        Length = 248

 Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
 Identities = 29/100 (29%), Positives = 52/100 (52%)

Query:   179 LAMKLITLTAMTVFAFDNMSIFSSSPVYISNVRFHIVPNRYLRIGDLHRLPAGTTLPTLE 238
             L+ + +TL A T     ++ +  S P Y+S +R H VP R L +  L  LP  ++LPTL 
Sbjct:    64 LSDESLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLR-LSLSGLRSLPNSSSLPTLL 122

Query:   239 RGQSLTVTRGGVVTGPFRINLVRIMVPDIMNSLKIIVYGV 278
                 L +T+         ++ V++++P + +   I V+G+
Sbjct:   123 PSHRLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGL 162


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      363       351   0.00078  117 3  11 22  0.49    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  225 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.93u 0.14s 29.07t   Elapsed:  00:00:01
  Total cpu time:  28.93u 0.14s 29.07t   Elapsed:  00:00:01
  Start:  Mon May 20 22:05:37 2013   End:  Mon May 20 22:05:38 2013

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