Query 045438
Match_columns 363
No_of_seqs 172 out of 263
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 23:23:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o70_A Fasciclin I, FAS I, FCN 99.9 5.1E-26 1.8E-30 219.2 6.4 215 20-284 49-310 (324)
2 2vxp_A Transforming growth fac 99.8 1.8E-19 6.2E-24 153.5 4.8 105 168-281 7-131 (132)
3 1w7d_A Fasciclin-like protein; 99.8 5.7E-20 1.9E-24 157.6 1.6 103 172-284 13-136 (137)
4 1nyo_A Immunogenic protein MPT 99.7 2.5E-18 8.5E-23 152.1 4.9 105 168-284 33-162 (163)
5 1o70_A Fasciclin I, FAS I, FCN 99.5 8.9E-15 3E-19 140.8 2.7 101 183-285 42-158 (324)
6 1w7d_A Fasciclin-like protein; 99.0 5.4E-10 1.8E-14 95.4 5.4 70 40-123 66-136 (137)
7 1nyo_A Immunogenic protein MPT 98.9 1.6E-09 5.5E-14 95.5 5.4 76 33-123 86-162 (163)
8 2vxp_A Transforming growth fac 98.7 5.8E-09 2E-13 88.4 3.6 70 38-120 61-131 (132)
9 1q2j_A MU-conotoxin SMIIIA; HE 12.3 48 0.0017 20.6 0.1 7 4-10 12-18 (26)
10 4egx_A Kinesin-like protein KI 10.7 1.9E+02 0.0066 25.2 3.6 77 37-119 76-168 (184)
No 1
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.92 E-value=5.1e-26 Score=219.19 Aligned_cols=215 Identities=15% Similarity=0.227 Sum_probs=146.9
Q ss_pred CCchhhh---cccchhhhhhcCCCchHHHHhhcccCcccCHHHHhcCCCC--CeeeecCCCeeEEEEeccCcCCCcceEE
Q 045438 20 PMLPPIL---SHLGFNKLATAAPSLSSDIVSEHFVPGLFTIHYLRKLDFG--TKIEMRSPGRCITVTFSESQNDTVSKVF 94 (363)
Q Consensus 20 ~~l~~~l---~~l~f~eLa~~~~~l~~~LL~yHilpg~ls~~dL~~Lp~g--t~lpTll~~~~l~IT~~~~~~~~~~~v~ 94 (363)
-+|+|.. ..+.+.+|......|. ++|+||+++++++.++|.....+ ..++|+.-+..+.++..+ .+....++
T Consensus 49 TvFAPtn~Af~~~~~~~l~~~~~~l~-~iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~--~~~~~~v~ 125 (324)
T 1o70_A 49 TILAPSNEAWNSSNINNVLRDRNKMR-QILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRG--EGSDTVIT 125 (324)
T ss_dssp EEEEECHHHHHHTCTHHHHTCHHHHH-HHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEES--CGGGCEEE
T ss_pred EEEEEChHhhhcccHhhhhCCHHHHH-HHHHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEee--cCCceEEE
Confidence 3556652 2233444433444555 89999999999999999975311 168888644335544321 00135688
Q ss_pred ECc----EEEcCCCcc-cCCcEEEEEecccCCCCCCcccccccccccCCCCCCCCCCccccccCcchhHHHHHHHHHHHh
Q 045438 95 IGG----VEITRPDLF-NDGIIFIHGIQGIISPLPLLSCEGQRMTWLPFPFQPSDHGHYHWIEAQSPIMSLMLRDAMLRL 169 (363)
Q Consensus 95 InG----V~It~pDlf-~nG~iVVHgId~vL~p~~~~s~~~~~~~s~~~P~~~s~~~~~~~~~~~~si~r~~l~~A~~~L 169 (363)
++| +.|+.+|+. .|| |||+||+||.||... +.+.|
T Consensus 126 v~~g~~~a~v~~~di~~~NG--vIhvID~VL~pp~~t--------------------------------------i~~~l 165 (324)
T 1o70_A 126 VEGGGVNATVIQADVAQTNG--YVHIIDHVLGVPYTT--------------------------------------VLGKL 165 (324)
T ss_dssp EEETTEEEEEEEEEEECSSE--EEEEESSCTTSCCSC--------------------------------------HHHHH
T ss_pred EcCCceeEEEEeccccccCc--EEEEEchhhhhchhh--------------------------------------HHHHh
Confidence 875 899999994 788 999999999986320 00112
Q ss_pred hc-cChhHHHHHhc-------cc-CCCceEEEeeCCCccccC-------------C---cccccccccccccC--cccCc
Q 045438 170 QN-SGFGMLSLAMK-------LI-TLTAMTVFAFDNMSIFSS-------------S---PVYISNVRFHIVPN--RYLRI 222 (363)
Q Consensus 170 r~-~Gfs~~a~aL~-------L~-~~~~~TVFAPtD~Af~~~-------------~---~~l~~vLrYHVVPg--~~L~~ 222 (363)
++ ..|+.|..+++ |+ ..++||||||+|+||... . +.+.++|+|||||+ .+ +.
T Consensus 166 ~~~~~fs~~~~~l~~~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~-~~ 244 (324)
T 1o70_A 166 ESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEY-TM 244 (324)
T ss_dssp HHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCC-CH
T ss_pred hcCchHHHHHHHHHhhCHHHHhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceE-cH
Confidence 22 33666666555 44 357899999999998532 1 27788999999998 54 77
Q ss_pred cccccCCC--CC-ccccccCCceEEEEE--CCCccccEEEc----eEEeecCceeecCceEEEEec-CCCCC
Q 045438 223 GDLHRLPA--GT-TLPTLERGQSLTVTR--GGVVTGPFRIN----LVRIMVPDIMNSLKIIVYGVN-LPFPH 284 (363)
Q Consensus 223 ~dL~~L~~--Gt-~l~TLl~g~~L~Vt~--~gg~~~~v~VN----~v~Iv~pDi~~~~~gVVHgId-~l~P~ 284 (363)
++|..... +. .++|+. ..|.|+. .++. ++|| +++|+.+|+.. .|||||+|| +++|+
T Consensus 245 ~~l~~~~~~~~~~~~~Tl~--~~l~v~~~~~~~~---v~v~~~~~~a~v~~~di~~-~NGvIHvID~VL~P~ 310 (324)
T 1o70_A 245 KDLVKFSQESGSVILPTFR--DSLSIRVEEEAGR---YVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEE 310 (324)
T ss_dssp HHHHHHHHHSSSEEEECSS--SEEEEEEEEETTE---EEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCT
T ss_pred HHHhhhccCCCeeeeeccC--CcEEEEEEecCCE---EEEEecCceeEEEEccccc-CCCeEEEeceeecCC
Confidence 88874321 11 378874 5777765 4665 8998 89999999976 468999999 99998
No 2
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.76 E-value=1.8e-19 Score=153.50 Aligned_cols=105 Identities=26% Similarity=0.290 Sum_probs=85.4
Q ss_pred Hhhc-cChhHHHHHhc-------ccCCCceEEEeeCCCccccC-----------CcccccccccccccCcccCccccccC
Q 045438 168 RLQN-SGFGMLSLAMK-------LITLTAMTVFAFDNMSIFSS-----------SPVYISNVRFHIVPNRYLRIGDLHRL 228 (363)
Q Consensus 168 ~Lr~-~Gfs~~a~aL~-------L~~~~~~TVFAPtD~Af~~~-----------~~~l~~vLrYHVVPg~~L~~~dL~~L 228 (363)
.|++ .+|++|+.+++ |++.++||||||+|+||... .+.+.++|+|||+|+.+ ..++|.
T Consensus 7 ~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~-~~~~l~-- 83 (132)
T 2vxp_A 7 VLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEIL-VSGGIG-- 83 (132)
T ss_dssp HHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCC-CSTTCS--
T ss_pred HHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCcee-ehhhcc--
Confidence 4444 45888888877 56678999999999998543 24677899999999996 777664
Q ss_pred CCCCccccccCCceEEEEECCCccccEEEceEEeecCceeecCceEEEEec-CC
Q 045438 229 PAGTTLPTLERGQSLTVTRGGVVTGPFRINLVRIMVPDIMNSLKIIVYGVN-LP 281 (363)
Q Consensus 229 ~~Gt~l~TLl~g~~L~Vt~~gg~~~~v~VN~v~Iv~pDi~~~~~gVVHgId-~l 281 (363)
.+..++|+ .|..|.|+..++. ++||+++|+.+|+.. .|||||+|| ++
T Consensus 84 -~~~~~~tl-~G~~l~v~~~~~~---v~vn~a~v~~~di~a-~NGvIHvID~VL 131 (132)
T 2vxp_A 84 -ALVRLKSL-QGDKLEVSLKNNV---VSVNKEPVAEPDIMA-TNGVVHVITNVL 131 (132)
T ss_dssp -SCEEEEBT-TSSEEEEEEETTE---EEESSCBEEEEEEEE-TTEEEEEESSCC
T ss_pred -CCceEecC-CCCEEEEEEeCCE---EEEeccEEEEcceec-CCEEEEEECcEe
Confidence 67788897 7889999998887 999999999999976 578999999 54
No 3
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.76 E-value=5.7e-20 Score=157.55 Aligned_cols=103 Identities=27% Similarity=0.331 Sum_probs=83.0
Q ss_pred cChhHHHHHhc-------ccCCCceEEEeeCCCccccCC-------------cccccccccccccCcccCccccccCCCC
Q 045438 172 SGFGMLSLAMK-------LITLTAMTVFAFDNMSIFSSS-------------PVYISNVRFHIVPNRYLRIGDLHRLPAG 231 (363)
Q Consensus 172 ~Gfs~~a~aL~-------L~~~~~~TVFAPtD~Af~~~~-------------~~l~~vLrYHVVPg~~L~~~dL~~L~~G 231 (363)
.+|++|+.+++ |++.+++|||||+|+||.... +.+.++|+||||||++ +.++|. .|
T Consensus 13 ~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~-~~~~l~---~~ 88 (137)
T 1w7d_A 13 GSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEV-MSSDLT---EG 88 (137)
T ss_dssp SSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCC-CTTTSC---SS
T ss_pred CCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEE-cHHHhc---CC
Confidence 34666665555 556689999999999986531 3467899999999996 887776 67
Q ss_pred CccccccCCceEEEEECCCccccEEEceEEeecCceeecCceEEEEec-CCCCC
Q 045438 232 TTLPTLERGQSLTVTRGGVVTGPFRINLVRIMVPDIMNSLKIIVYGVN-LPFPH 284 (363)
Q Consensus 232 t~l~TLl~g~~L~Vt~~gg~~~~v~VN~v~Iv~pDi~~~~~gVVHgId-~l~P~ 284 (363)
..++|+ .|..|.|+..+| ++||+++|+.+|+.. .|||||+|| +++|+
T Consensus 89 ~~~~tl-~G~~l~v~~~~g----v~vn~a~v~~~di~~-~NGvIHvID~VL~P~ 136 (137)
T 1w7d_A 89 MTAETV-EGGALTVTLEGG----PKVNGVSISQPDVDA-SNGVIHVIDGVLMPG 136 (137)
T ss_dssp EEEECT-TSCEEEEECTTS----CEETTEECSBCCCBC-SSSEEEBCSSCCSSC
T ss_pred Ceeecc-CCceEEEEecCC----EEEeCcEEEECCeec-CCeEEEEECeeeCCC
Confidence 778887 788999998755 699999999999965 577999999 99986
No 4
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.72 E-value=2.5e-18 Score=152.14 Aligned_cols=105 Identities=25% Similarity=0.345 Sum_probs=85.8
Q ss_pred Hhh-ccChhHHHHHhc------------ccCCCceEEEeeCCCccccC-----------CcccccccccccccCcccCcc
Q 045438 168 RLQ-NSGFGMLSLAMK------------LITLTAMTVFAFDNMSIFSS-----------SPVYISNVRFHIVPNRYLRIG 223 (363)
Q Consensus 168 ~Lr-~~Gfs~~a~aL~------------L~~~~~~TVFAPtD~Af~~~-----------~~~l~~vLrYHVVPg~~L~~~ 223 (363)
.|+ ..+|++|+.+++ |+..+ ||||||+|+||... .+.+.++|+||||||++ +.+
T Consensus 33 ~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~~-~~~ 110 (163)
T 1nyo_A 33 AASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQT-SPA 110 (163)
T ss_dssp HHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCC-CTT
T ss_pred HHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCEE-cHH
Confidence 444 455888888776 33445 99999999998543 25678899999999996 888
Q ss_pred ccccCCCCCccccccCCceEEEEECCCccccEEEceEEeecCceeecCceEEEEec-CCCCC
Q 045438 224 DLHRLPAGTTLPTLERGQSLTVTRGGVVTGPFRINLVRIMVPDIMNSLKIIVYGVN-LPFPH 284 (363)
Q Consensus 224 dL~~L~~Gt~l~TLl~g~~L~Vt~~gg~~~~v~VN~v~Iv~pDi~~~~~gVVHgId-~l~P~ 284 (363)
+|. | .++|+ .|+.|.|+..++. ++||+++|+.+|+.. .|||||+|| +++|+
T Consensus 111 ~l~----g-~~~Tl-~G~~l~v~~~~~~---v~vn~a~V~~~di~a-~NGvIHvID~VL~P~ 162 (163)
T 1nyo_A 111 NVV----G-TRQTL-QGASVTVTGQGNS---LKVGNADVVCGGVST-ANATVYMIDSVLMPP 162 (163)
T ss_dssp TSC----E-EEECT-TSSEEEEEECSSC---EEETTEECSSBCCCC-SSEEEBCBSSCCCCC
T ss_pred HhC----C-ccccC-CCCEEEEEEECCE---EEEeccEEEECceEc-CCEEEEEECcEeCCC
Confidence 875 4 68887 7889999998887 999999999999965 678999999 99986
No 5
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.47 E-value=8.9e-15 Score=140.75 Aligned_cols=101 Identities=17% Similarity=0.180 Sum_probs=74.4
Q ss_pred ccCCCceEEEeeCCCccccC--------CcccccccccccccCcccCccccccCCC-CC-ccccccCCceEEEEECC-Cc
Q 045438 183 LITLTAMTVFAFDNMSIFSS--------SPVYISNVRFHIVPNRYLRIGDLHRLPA-GT-TLPTLERGQSLTVTRGG-VV 251 (363)
Q Consensus 183 L~~~~~~TVFAPtD~Af~~~--------~~~l~~vLrYHVVPg~~L~~~dL~~L~~-Gt-~l~TLl~g~~L~Vt~~g-g~ 251 (363)
|++.++||||||+|+||..+ .+.+.++|+||||||++ +.++|..... |. .++|+.++..+.+...+ +.
T Consensus 42 L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~-~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~ 120 (324)
T 1o70_A 42 INSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRL-NVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGS 120 (324)
T ss_dssp HHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCC-CHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGG
T ss_pred HcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCee-cHHHHhhccCCCceEEEcCCCCceEEEEEeecCC
Confidence 55668999999999999654 24678899999999996 8999885432 21 68898544335444332 11
Q ss_pred cccEEEce----EEeecCceeecCceEEEEec-CCCCCC
Q 045438 252 TGPFRINL----VRIMVPDIMNSLKIIVYGVN-LPFPHF 285 (363)
Q Consensus 252 ~~~v~VN~----v~Iv~pDi~~~~~gVVHgId-~l~P~~ 285 (363)
...+++|+ ++|+.+|+.. +|||||+|| +++|+-
T Consensus 121 ~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~ 158 (324)
T 1o70_A 121 DTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPY 158 (324)
T ss_dssp GCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCC
T ss_pred ceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhch
Confidence 12388985 9999999965 578999999 888874
No 6
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=98.95 E-value=5.4e-10 Score=95.37 Aligned_cols=70 Identities=34% Similarity=0.569 Sum_probs=60.6
Q ss_pred CchHHHHhhcccCcccCHHHHhcCCCCCeeeecCCCeeEEEEeccCcCCCcceEEECcEEEcCCCcc-cCCcEEEEEecc
Q 045438 40 SLSSDIVSEHFVPGLFTIHYLRKLDFGTKIEMRSPGRCITVTFSESQNDTVSKVFIGGVEITRPDLF-NDGIIFIHGIQG 118 (363)
Q Consensus 40 ~l~~~LL~yHilpg~ls~~dL~~Lp~gt~lpTll~~~~l~IT~~~~~~~~~~~v~InGV~It~pDlf-~nG~iVVHgId~ 118 (363)
.|. ++|+||+++++++.++|.. |..++|+ .++.+.|+..+ + ++|||+.|+.+|+. .|| |||+||+
T Consensus 66 ~l~-~lL~yHvv~~~~~~~~l~~---~~~~~tl-~G~~l~v~~~~------g-v~vn~a~v~~~di~~~NG--vIHvID~ 131 (137)
T 1w7d_A 66 KLT-EILTYHVVPGEVMSSDLTE---GMTAETV-EGGALTVTLEG------G-PKVNGVSISQPDVDASNG--VIHVIDG 131 (137)
T ss_dssp HHH-HHHHHHEEESCCCTTTSCS---SEEEECT-TSCEEEEECTT------S-CEETTEECSBCCCBCSSS--EEEBCSS
T ss_pred HHH-HHHHhhEeCcEEcHHHhcC---CCeeecc-CCceEEEEecC------C-EEEeCcEEEECCeecCCe--EEEEECe
Confidence 344 8999999999999999875 6778776 58899998655 6 99999999999995 888 9999999
Q ss_pred cCCCC
Q 045438 119 IISPL 123 (363)
Q Consensus 119 vL~p~ 123 (363)
||.|+
T Consensus 132 VL~P~ 136 (137)
T 1w7d_A 132 VLMPG 136 (137)
T ss_dssp CCSSC
T ss_pred eeCCC
Confidence 99986
No 7
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=98.87 E-value=1.6e-09 Score=95.51 Aligned_cols=76 Identities=20% Similarity=0.284 Sum_probs=62.7
Q ss_pred hhhhcCCCchHHHHhhcccCcccCHHHHhcCCCCCeeeecCCCeeEEEEeccCcCCCcceEEECcEEEcCCCcc-cCCcE
Q 045438 33 KLATAAPSLSSDIVSEHFVPGLFTIHYLRKLDFGTKIEMRSPGRCITVTFSESQNDTVSKVFIGGVEITRPDLF-NDGII 111 (363)
Q Consensus 33 eLa~~~~~l~~~LL~yHilpg~ls~~dL~~Lp~gt~lpTll~~~~l~IT~~~~~~~~~~~v~InGV~It~pDlf-~nG~i 111 (363)
.|......|. ++|+||+++++++.++|. | .++|+ .++.+.|+... +.++||+++|+.+|+. .||
T Consensus 86 ~L~~~~~~L~-~iL~yHvv~g~~~~~~l~----g-~~~Tl-~G~~l~v~~~~------~~v~vn~a~V~~~di~a~NG-- 150 (163)
T 1nyo_A 86 ELKTNSSLLT-SILTYHVVAGQTSPANVV----G-TRQTL-QGASVTVTGQG------NSLKVGNADVVCGGVSTANA-- 150 (163)
T ss_dssp HHTTCSSHHH-HHHHHTEEESCCCTTTSC----E-EEECT-TSSEEEEEECS------SCEEETTEECSSBCCCCSSE--
T ss_pred HHhcCHHHHH-HHHHhceECCEEcHHHhC----C-ccccC-CCCEEEEEEEC------CEEEEeccEEEECceEcCCE--
Confidence 3333344566 899999999999999986 3 67777 58899998765 6799999999999995 777
Q ss_pred EEEEecccCCCC
Q 045438 112 FIHGIQGIISPL 123 (363)
Q Consensus 112 VVHgId~vL~p~ 123 (363)
|||+||+||.|+
T Consensus 151 vIHvID~VL~P~ 162 (163)
T 1nyo_A 151 TVYMIDSVLMPP 162 (163)
T ss_dssp EEBCBSSCCCCC
T ss_pred EEEEECcEeCCC
Confidence 999999999996
No 8
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=98.71 E-value=5.8e-09 Score=88.38 Aligned_cols=70 Identities=17% Similarity=0.346 Sum_probs=58.8
Q ss_pred CCCchHHHHhhcccCcccCHHHHhcCCCCCeeeecCCCeeEEEEeccCcCCCcceEEECcEEEcCCCcc-cCCcEEEEEe
Q 045438 38 APSLSSDIVSEHFVPGLFTIHYLRKLDFGTKIEMRSPGRCITVTFSESQNDTVSKVFIGGVEITRPDLF-NDGIIFIHGI 116 (363)
Q Consensus 38 ~~~l~~~LL~yHilpg~ls~~dL~~Lp~gt~lpTll~~~~l~IT~~~~~~~~~~~v~InGV~It~pDlf-~nG~iVVHgI 116 (363)
...|. ++|+||++++.++.++|.. +..++|+ .+..+.|+..+ +.++|||+.|+.+|+. .|| |||+|
T Consensus 61 ~~~l~-~iL~yHvv~~~~~~~~l~~---~~~~~tl-~G~~l~v~~~~------~~v~vn~a~v~~~di~a~NG--vIHvI 127 (132)
T 2vxp_A 61 AKELA-NILKYHIGDEILVSGGIGA---LVRLKSL-QGDKLEVSLKN------NVVSVNKEPVAEPDIMATNG--VVHVI 127 (132)
T ss_dssp HHHHH-HHHHHSBBSSCCCSTTCSS---CEEEEBT-TSSEEEEEEET------TEEEESSCBEEEEEEEETTE--EEEEE
T ss_pred HHHHH-HHHHhcCcCceeehhhccC---CceEecC-CCCEEEEEEeC------CEEEEeccEEEEcceecCCE--EEEEE
Confidence 34455 8999999999998888754 6778776 58899998765 7899999999999995 788 99999
Q ss_pred cccC
Q 045438 117 QGII 120 (363)
Q Consensus 117 d~vL 120 (363)
|+||
T Consensus 128 D~VL 131 (132)
T 2vxp_A 128 TNVL 131 (132)
T ss_dssp SSCC
T ss_pred CcEe
Confidence 9987
No 9
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=12.25 E-value=48 Score=20.62 Aligned_cols=7 Identities=57% Similarity=1.559 Sum_probs=5.1
Q ss_pred ccccccc
Q 045438 4 LRWCRTS 10 (363)
Q Consensus 4 ~~~~~~~ 10 (363)
-||||.-
T Consensus 12 ~rWCrdh 18 (26)
T 1q2j_A 12 SRWCRDH 18 (26)
T ss_dssp SSSSSSS
T ss_pred chhhccc
Confidence 4899864
No 10
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=10.74 E-value=1.9e+02 Score=25.24 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=44.5
Q ss_pred cCCCchHHHHhhcccCcccC--------HHHHhcCCCCCeeeecCCCeeEEEEeccC--------cCCCcceEEECcEEE
Q 045438 37 AAPSLSSDIVSEHFVPGLFT--------IHYLRKLDFGTKIEMRSPGRCITVTFSES--------QNDTVSKVFIGGVEI 100 (363)
Q Consensus 37 ~~~~l~~~LL~yHilpg~ls--------~~dL~~Lp~gt~lpTll~~~~l~IT~~~~--------~~~~~~~v~InGV~I 100 (363)
..|.++ ..|.|++-+|.-. ..|+.- .|..| ++.+|........ ....++.++|||..|
T Consensus 76 ~Dp~ls-~~l~y~L~~g~t~VGr~~~~~~~dI~L--~G~~I---~~~Hc~i~~~~~~~~~~~vtl~p~~~a~t~VNG~~I 149 (184)
T 4egx_A 76 EDPLMS-ECLLYYIKDGITRVGREDGERRQDIVL--SGHFI---KEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGKKV 149 (184)
T ss_dssp CCTTCS-SCSEEECCSEEEEEECSSSSSCCSEEC--CSTTC---CSEEEEEEEECCSSCSCEEEEEECTTCCEEETTEEC
T ss_pred CCcccC-ceEEEEECCCcCcCCCCCcCCCCeEEE--Ccccc---ccccEEEEEcCCCCceEEEEEeeCCCCeEEEcCEEc
Confidence 457777 7777887776332 224442 34333 4666643221110 000235799999999
Q ss_pred cCCCcccCCcEEEEEeccc
Q 045438 101 TRPDLFNDGIIFIHGIQGI 119 (363)
Q Consensus 101 t~pDlf~nG~iVVHgId~v 119 (363)
+.+=....|..|+.|=..+
T Consensus 150 ~~~~~L~~GDrI~lG~~h~ 168 (184)
T 4egx_A 150 TEPSILRSGNRIIMGKSHV 168 (184)
T ss_dssp CSCEECCTTCEEEETTTEE
T ss_pred cccEEcCCCCEEEECCCCE
Confidence 9886667777787775543
Done!