Query 045439
Match_columns 113
No_of_seqs 101 out of 1499
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 23:24:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2E-28 6.8E-33 140.6 10.5 107 3-113 30-140 (169)
2 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-26 5.6E-31 128.2 10.6 105 5-113 5-113 (137)
3 3f6q_A Integrin-linked protein 99.9 9E-26 3.1E-30 130.1 11.5 108 2-113 31-142 (179)
4 3twr_A Tankyrase-2; ankyrin re 99.9 1.1E-25 3.7E-30 128.2 11.7 107 3-113 35-145 (165)
5 1d9s_A Cyclin-dependent kinase 99.9 1E-26 3.5E-31 128.9 6.9 107 2-113 4-115 (136)
6 4gpm_A Engineered protein OR26 99.9 8.2E-26 2.8E-30 129.7 10.2 99 3-105 63-165 (169)
7 3aaa_C Myotrophin, protein V-1 99.9 7.7E-26 2.6E-30 123.4 9.4 104 6-113 3-110 (123)
8 3v30_A DNA-binding protein rfx 99.9 9.7E-26 3.3E-30 129.1 10.0 107 3-113 29-139 (172)
9 3v31_A Ankyrin repeat family A 99.9 2.3E-25 7.8E-30 127.1 10.4 107 3-113 29-139 (167)
10 1awc_B Protein (GA binding pro 99.9 2.4E-25 8.2E-30 125.5 10.0 104 6-113 30-137 (153)
11 4b93_B Ankyrin repeat domain-c 99.9 2.3E-25 7.8E-30 135.9 10.3 110 3-113 79-222 (269)
12 2rfm_A Putative ankyrin repeat 99.9 2.9E-25 9.8E-30 129.2 10.0 107 3-113 61-171 (192)
13 2y1l_E Darpin-8.4; hydrolase-i 99.9 4E-25 1.4E-29 126.4 10.5 107 3-113 40-150 (169)
14 1oy3_D Transcription factor in 99.9 3.8E-25 1.3E-29 134.7 10.4 107 3-113 151-262 (282)
15 2l6b_A NR1C; ankyrin, consensu 99.9 1.1E-25 3.7E-30 121.5 6.6 105 4-112 3-111 (115)
16 4b93_B Ankyrin repeat domain-c 99.9 4.4E-25 1.5E-29 134.7 9.4 106 3-112 45-155 (269)
17 2rfm_A Putative ankyrin repeat 99.9 2.3E-25 7.7E-30 129.6 7.6 107 3-113 28-138 (192)
18 2jab_A H10-2-G3; HER2, darpin, 99.9 4.7E-25 1.6E-29 122.2 8.4 103 7-113 11-117 (136)
19 2dzn_A Probable 26S proteasome 99.9 2.5E-24 8.5E-29 127.8 10.8 107 3-113 100-212 (228)
20 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2E-24 6.8E-29 121.9 9.2 106 2-113 28-137 (156)
21 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.5E-24 1.6E-28 111.3 9.8 88 9-100 1-92 (93)
22 3ehr_A Osteoclast-stimulating 99.9 3.8E-25 1.3E-29 131.3 6.1 105 5-113 68-177 (222)
23 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.6E-24 5.5E-29 122.9 8.3 106 3-113 31-141 (162)
24 3deo_A Signal recognition part 99.9 7.1E-25 2.4E-29 126.9 6.9 102 7-113 41-147 (183)
25 1yyh_A HN1;, notch 1, ankyrin 99.9 2.5E-24 8.6E-29 130.0 9.5 107 3-113 117-227 (253)
26 1k1a_A B-cell lymphoma 3-encod 99.9 9.4E-24 3.2E-28 126.1 11.9 107 3-113 109-220 (241)
27 2rfa_A Transient receptor pote 99.9 4.6E-24 1.6E-28 127.1 10.1 110 3-113 30-158 (232)
28 2vge_A RELA-associated inhibit 99.9 6.4E-24 2.2E-28 126.9 10.7 106 4-113 15-125 (229)
29 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.9E-24 2E-28 115.8 9.7 101 9-113 1-105 (126)
30 1bi7_B P16INK4A, MTS1, multipl 99.9 7.7E-25 2.6E-29 123.9 5.9 103 5-112 40-147 (156)
31 1bi7_B P16INK4A, MTS1, multipl 99.9 9.3E-25 3.2E-29 123.5 6.0 105 4-113 6-115 (156)
32 1ikn_D Protein (I-kappa-B-alph 99.9 2E-23 6.7E-28 124.7 11.7 110 3-113 71-188 (236)
33 3kea_A K1L; tropism, ANK repea 99.9 2.1E-24 7.3E-29 132.4 7.7 106 3-113 24-133 (285)
34 1oy3_D Transcription factor in 99.9 3.5E-24 1.2E-28 130.4 8.6 93 2-95 1-94 (282)
35 3b7b_A Euchromatic histone-lys 99.9 9.8E-24 3.4E-28 125.9 10.3 107 3-113 104-214 (237)
36 3aji_A 26S proteasome non-ATPa 99.9 1.1E-23 3.8E-28 125.3 10.5 106 4-113 100-209 (231)
37 2f8y_A Notch homolog 1, transl 99.9 1.6E-23 5.3E-28 124.1 10.9 107 3-113 85-195 (223)
38 3jxi_A Vanilloid receptor-rela 99.9 3.6E-24 1.2E-28 129.5 7.8 106 4-113 87-229 (260)
39 2etb_A Transient receptor pote 99.9 6.5E-24 2.2E-28 128.1 8.6 105 5-113 85-225 (256)
40 3ui2_A Signal recognition part 99.9 2.6E-24 9E-29 129.5 6.3 102 7-113 42-148 (244)
41 3t8k_A Uncharacterized protein 99.9 7E-25 2.4E-29 127.5 3.5 106 4-113 31-158 (186)
42 3hra_A Ankyrin repeat family p 99.9 2.3E-23 7.9E-28 121.6 9.9 108 3-113 32-144 (201)
43 3aji_A 26S proteasome non-ATPa 99.9 3E-23 1E-27 123.4 10.5 104 5-112 35-142 (231)
44 2rfa_A Transient receptor pote 99.9 3E-23 1E-27 123.5 10.2 108 4-113 69-201 (232)
45 1s70_B 130 kDa myosin-binding 99.9 6.1E-23 2.1E-27 126.1 11.8 110 3-113 99-269 (299)
46 3v30_A DNA-binding protein rfx 99.9 2.9E-23 9.9E-28 118.8 9.2 106 3-112 62-171 (172)
47 3v31_A Ankyrin repeat family A 99.9 2.4E-23 8.3E-28 118.6 8.8 101 9-113 2-106 (167)
48 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.7E-23 9.3E-28 124.7 9.1 102 8-113 35-141 (239)
49 4hbd_A KN motif and ankyrin re 99.9 2E-23 6.8E-28 127.7 8.6 110 3-113 104-254 (276)
50 2etb_A Transient receptor pote 99.9 8.1E-24 2.8E-28 127.7 6.7 107 6-113 39-176 (256)
51 1yyh_A HN1;, notch 1, ankyrin 99.9 4.8E-23 1.7E-27 124.3 9.8 104 6-112 53-160 (253)
52 1sw6_A Regulatory protein SWI6 99.9 5.1E-23 1.8E-27 128.4 10.2 107 3-113 123-320 (327)
53 2pnn_A Transient receptor pote 99.9 2.4E-23 8.1E-28 126.8 8.5 104 6-113 97-237 (273)
54 1n11_A Ankyrin; clathrin, BAND 99.9 3.8E-23 1.3E-27 132.7 9.4 106 4-113 272-381 (437)
55 2dzn_A Probable 26S proteasome 99.9 9.1E-23 3.1E-27 121.0 10.4 105 6-112 68-177 (228)
56 3utm_A Tankyrase-1; tankyrase, 99.9 8.9E-23 3E-27 127.3 10.6 107 3-113 51-161 (351)
57 4hbd_A KN motif and ankyrin re 99.9 2.4E-23 8.1E-28 127.3 7.8 89 3-95 176-266 (276)
58 2xai_A ASB-9, ankyrin repeat a 99.9 1.2E-22 4.1E-27 123.1 10.6 101 8-113 99-203 (261)
59 2f8y_A Notch homolog 1, transl 99.9 1.4E-22 4.6E-27 120.0 10.5 104 6-112 54-161 (223)
60 3hra_A Ankyrin repeat family p 99.9 1.1E-22 3.8E-27 118.7 9.7 108 3-113 65-182 (201)
61 2xai_A ASB-9, ankyrin repeat a 99.9 1.3E-22 4.5E-27 122.9 10.2 106 3-113 29-138 (261)
62 1k1a_A B-cell lymphoma 3-encod 99.9 1.2E-22 4.2E-27 121.3 9.9 106 3-112 2-119 (241)
63 1ikn_D Protein (I-kappa-B-alph 99.9 6.4E-23 2.2E-27 122.5 8.7 109 2-113 37-155 (236)
64 3b7b_A Euchromatic histone-lys 99.9 1.5E-22 5.3E-27 120.7 10.3 107 3-113 4-115 (237)
65 1n11_A Ankyrin; clathrin, BAND 99.9 7.5E-23 2.6E-27 131.4 9.4 107 3-113 7-117 (437)
66 3ljn_A Hypothetical protein; a 99.9 3.5E-23 1.2E-27 130.4 7.3 106 5-113 133-248 (364)
67 2vge_A RELA-associated inhibit 99.9 7.1E-24 2.4E-28 126.7 3.9 106 3-112 47-159 (229)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.3E-22 4.3E-27 116.0 8.9 103 7-113 11-117 (169)
69 2jab_A H10-2-G3; HER2, darpin, 99.9 3.7E-22 1.3E-26 110.5 10.3 89 3-95 40-129 (136)
70 3d9h_A CDNA FLJ77766, highly s 99.9 2.7E-22 9.2E-27 123.1 10.3 97 4-104 53-153 (285)
71 3d9h_A CDNA FLJ77766, highly s 99.9 3.7E-22 1.3E-26 122.5 10.6 101 8-113 155-259 (285)
72 3jxi_A Vanilloid receptor-rela 99.9 5.1E-23 1.8E-27 124.4 6.2 106 7-113 43-180 (260)
73 2pnn_A Transient receptor pote 99.9 9.2E-23 3.2E-27 124.2 7.3 108 5-113 49-188 (273)
74 1s70_B 130 kDa myosin-binding 99.9 2.1E-22 7.2E-27 123.7 8.6 103 7-113 37-143 (299)
75 1awc_B Protein (GA binding pro 99.9 3E-22 1E-26 112.7 8.5 99 10-113 2-104 (153)
76 3twr_A Tankyrase-2; ankyrin re 99.9 2.1E-22 7.2E-27 114.5 7.7 105 6-113 4-112 (165)
77 1ihb_A P18-INK4C(INK6), cyclin 99.9 9.5E-22 3.3E-26 111.4 10.4 96 3-101 63-162 (162)
78 3f6q_A Integrin-linked protein 99.9 5.1E-22 1.8E-26 114.4 8.8 103 8-113 3-109 (179)
79 1dcq_A PYK2-associated protein 99.9 1E-21 3.4E-26 120.4 10.2 95 3-101 162-263 (278)
80 3ljn_A Hypothetical protein; a 99.9 1.1E-21 3.9E-26 123.5 10.7 110 3-113 46-215 (364)
81 2zgd_A 3 repeat synthetic anky 99.9 8.2E-22 2.8E-26 105.7 8.6 89 3-95 17-106 (110)
82 3utm_A Tankyrase-1; tankyrase, 99.9 9.1E-22 3.1E-26 122.7 9.6 104 6-113 207-317 (351)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.9E-21 9.9E-26 105.1 10.5 95 3-101 28-126 (126)
84 3eu9_A Huntingtin-interacting 99.9 2.4E-21 8.3E-26 115.3 10.8 109 3-113 35-146 (240)
85 1d9s_A Cyclin-dependent kinase 99.9 3.1E-22 1.1E-26 110.8 6.4 94 3-101 38-136 (136)
86 2fo1_E LIN-12 protein; beta-ba 99.9 7.2E-22 2.5E-26 125.1 8.8 110 3-113 228-350 (373)
87 3ehr_A Osteoclast-stimulating 99.9 2.7E-22 9.4E-27 118.9 6.3 104 3-110 99-207 (222)
88 1wdy_A 2-5A-dependent ribonucl 99.9 2.7E-21 9.3E-26 117.5 10.6 103 7-113 36-152 (285)
89 3aaa_C Myotrophin, protein V-1 99.9 4.8E-22 1.7E-26 108.3 6.6 83 3-89 33-116 (123)
90 3kea_A K1L; tropism, ANK repea 99.9 4.9E-22 1.7E-26 121.9 7.3 104 3-112 88-197 (285)
91 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-21 4.6E-26 121.0 9.0 98 6-113 186-290 (301)
92 3lvq_E ARF-GAP with SH3 domain 99.9 2.3E-21 7.8E-26 126.7 9.6 98 7-108 168-272 (497)
93 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.6E-21 5.4E-26 117.0 8.1 99 3-105 63-168 (239)
94 1wdy_A 2-5A-dependent ribonucl 99.9 8.8E-21 3E-25 115.3 10.6 106 4-113 66-186 (285)
95 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.6E-21 2.9E-25 106.9 9.8 88 3-95 61-149 (156)
96 2fo1_E LIN-12 protein; beta-ba 99.8 5.7E-21 1.9E-25 121.0 9.4 107 3-113 159-283 (373)
97 3eu9_A Huntingtin-interacting 99.8 1E-20 3.4E-25 112.7 9.0 108 3-113 2-113 (240)
98 3deo_A Signal recognition part 99.8 1.1E-20 3.8E-25 109.2 8.9 86 3-92 69-156 (183)
99 3jue_A Arfgap with coiled-coil 99.8 5.3E-21 1.8E-25 121.1 8.0 99 11-113 200-305 (368)
100 2b0o_E UPLC1; arfgap, structur 99.8 2.7E-20 9.1E-25 115.2 10.1 100 10-113 151-263 (301)
101 3c5r_A BARD-1, BRCA1-associate 99.8 2.1E-21 7E-26 107.5 4.5 89 3-95 36-125 (137)
102 3jue_A Arfgap with coiled-coil 99.8 2.9E-20 9.9E-25 117.7 10.1 89 3-95 226-317 (368)
103 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-20 8E-25 122.0 9.9 100 10-113 132-244 (497)
104 1dcq_A PYK2-associated protein 99.8 4.9E-20 1.7E-24 112.9 10.0 102 11-113 131-242 (278)
105 3ui2_A Signal recognition part 99.8 4.6E-20 1.6E-24 111.0 9.1 83 3-89 70-154 (244)
106 3t8k_A Uncharacterized protein 99.8 1E-20 3.4E-25 110.0 5.9 99 10-113 6-119 (186)
107 4g8k_A 2-5A-dependent ribonucl 99.8 7.8E-20 2.7E-24 114.1 9.0 105 5-113 163-277 (337)
108 4g8k_A 2-5A-dependent ribonucl 99.8 9.5E-20 3.2E-24 113.7 8.2 100 9-112 24-128 (337)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.7 2.2E-18 7.6E-23 89.6 5.6 68 45-113 2-72 (93)
110 1sw6_A Regulatory protein SWI6 99.7 1.7E-18 5.8E-23 108.0 4.4 96 14-113 101-205 (327)
111 2aja_A Ankyrin repeat family p 99.7 2.3E-19 7.8E-24 113.9 -0.1 107 6-113 88-202 (376)
112 2l6b_A NR1C; ankyrin, consensu 99.7 1.4E-17 4.7E-22 89.5 4.1 77 3-83 35-112 (115)
113 2aja_A Ankyrin repeat family p 99.7 5E-18 1.7E-22 107.8 0.6 88 5-95 123-215 (376)
114 2zgd_A 3 repeat synthetic anky 99.6 2.7E-16 9.1E-21 84.0 5.2 68 45-113 24-94 (110)
115 1gp8_A Protein (scaffolding pr 42.3 21 0.00072 14.9 2.2 17 14-30 17-33 (40)
116 3zrh_A Ubiquitin thioesterase 28.0 61 0.0021 21.5 3.1 24 9-32 68-91 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=2e-28 Score=140.56 Aligned_cols=107 Identities=22% Similarity=0.243 Sum_probs=96.8
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|+|
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g---ad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~T 105 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLISKG---ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRT 105 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc---cchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCC
Confidence 5788999999999999999999999999999 45555555 99999999999999999999999999 8889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..|+.++ ++..|++++.+|.+|+|||
T Consensus 106 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL 140 (169)
T 4gpm_A 106 PLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPL 140 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 9999999999865 4889999999999999986
No 2
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=1.6e-26 Score=128.19 Aligned_cols=105 Identities=18% Similarity=0.100 Sum_probs=95.9
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHH
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 83 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l 83 (113)
.+|..|+||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L 80 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG---SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPL 80 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHH
Confidence 46889999999999999999999999999 45555555 99999999999999999999999998 788999999999
Q ss_pred HHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 84 HYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 84 ~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|+|+..++.++ ++..|++++.+|..|+|||
T Consensus 81 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 113 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV 113 (137)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 99999999865 4888999999999999996
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=9e-26 Score=130.13 Aligned_cols=108 Identities=21% Similarity=0.285 Sum_probs=98.2
Q ss_pred CcccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 2 LIKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 2 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
.++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~ 106 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRG---ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGN 106 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCC
Confidence 35678899999999999999999999999999 45555555 99999999999999999999999999 888999999
Q ss_pred cHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 81 NFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 81 t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 107 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 142 (179)
T 3f6q_A 107 VPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGG
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcH
Confidence 99999999999865 5889999999999999996
No 4
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.1e-25 Score=128.21 Aligned_cols=107 Identities=19% Similarity=0.220 Sum_probs=96.8
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++..+..|+||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 110 (165)
T 3twr_A 35 CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG---ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFT 110 (165)
T ss_dssp CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred ccccccCCCCHHHHHHHcChHHHHHHHHhcC---CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCC
Confidence 3566778999999999999999999999999 45555555 99999999999999999999999999 8889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 111 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 145 (165)
T 3twr_A 111 PLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTG
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChh
Confidence 9999999999865 5889999999999999996
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1e-26 Score=128.94 Aligned_cols=107 Identities=15% Similarity=0.049 Sum_probs=97.2
Q ss_pred CcccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCC-C
Q 045439 2 LIKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDR-G 79 (113)
Q Consensus 2 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~-g 79 (113)
.++.+|..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+. ++.+++++|+++|++ ++.+|.. |
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g 78 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAG---ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATL 78 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcC---CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCC
Confidence 36788999999999999999999999999999 45555555 9999999999 999999999999999 7889999 9
Q ss_pred CcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 80 WNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 80 ~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
.||||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 115 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPV 115 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 999999999999865 5889999999999999985
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=8.2e-26 Score=129.67 Aligned_cols=99 Identities=23% Similarity=0.267 Sum_probs=84.3
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |+||||+|+..++.+++++|++.|++ ++.+|..|+|
T Consensus 63 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g---advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~T 138 (169)
T 4gpm_A 63 VNAKDSDGRTPLHHAAENGHKEVVKLLISKG---ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRT 138 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred hhhhccCCCCHHHHHHHcCCHHHHHHHHHCc---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCC
Confidence 5678999999999999999999999999999 55566665 99999999999999999999999999 8899999999
Q ss_pred HHHHHHHhCChhh---HHhccCCcccc
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHL 105 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~ 105 (113)
|||+|+..|+.++ +++.|++++..
T Consensus 139 pL~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 139 PLDLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHTC-------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 9999999999865 58899988764
No 7
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=7.7e-26 Score=123.45 Aligned_cols=104 Identities=11% Similarity=0.030 Sum_probs=91.9
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
.+..|.|+||+|+..|+.+++++|++.+ .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|+||||
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG---EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLL 78 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT---CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC---CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHH
Confidence 3567899999999999999999999999 45555555 99999999999999999999999999 8889999999999
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+|+..++.++ ++..|++++.+|..|+|||
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 110 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADKTVKGPDGLTAF 110 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 9999999865 4888999999999999985
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=9.7e-26 Score=129.14 Aligned_cols=107 Identities=17% Similarity=0.247 Sum_probs=96.6
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.|+ +++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 104 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGA---DPHILAKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGT 104 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC---CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCC
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 56788999999999999999999999999994 4455554 99999999999999999999999999 7889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 139 (172)
T 3v30_A 105 PLLYAVRGNHVKCVEALLARGADLTTEADSGYTPM 139 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 9999999999865 4889999999999999985
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=2.3e-25 Score=127.06 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=96.8
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.|. +++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 104 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA---DPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGT 104 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCC
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCC
Confidence 57788999999999999999999999999994 4444454 99999999999999999999999999 7889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.++..|+|||
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 139 (167)
T 3v31_A 105 PLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSM 139 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 9999999999865 4889999999999999985
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=2.4e-25 Score=125.50 Aligned_cols=104 Identities=21% Similarity=0.227 Sum_probs=94.5
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
.|..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.||||
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 105 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAG---VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALH 105 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTT---CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 4778999999999999999999999999 45555555 99999999999999999999999999 8889999999999
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+|+..++.++ ++..|++++.+|..|+|||
T Consensus 106 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 137 (153)
T 1awc_B 106 WATEHNHQEVVELLIKYGADVHTQSKFCKTAF 137 (153)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 9999999865 4888999999999999985
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=2.3e-25 Score=135.92 Aligned_cols=110 Identities=22% Similarity=0.189 Sum_probs=82.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCC------------------------------CcccccCC-CccHHHH
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTA------------------------------SNIVDKDQ-KMTALHL 51 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~------------------------------~~~~~~~~-g~t~l~~ 51 (113)
++.+|..|+||||+|+..|+.+++++|++.++++ ++++..+. |.||||+
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~ 158 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIY 158 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 3555666666666666666666666665554322 23344444 8888888
Q ss_pred HHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 52 AAARGLARANERIISLAAKCYELVDDRGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 52 a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.++ ++..|++++.+|.+|+|||
T Consensus 159 A~~~g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 222 (269)
T 4b93_B 159 ACSGGHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAV 222 (269)
T ss_dssp HHHTTCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSG
T ss_pred HHHCCCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 8888888888888888888 78888888999999998888855 4788899999999999986
No 12
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=2.9e-25 Score=129.21 Aligned_cols=107 Identities=17% Similarity=0.073 Sum_probs=78.2
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 136 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKG---SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGET 136 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCC
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCC
Confidence 4556677777777777777777777777777 34444444 77888888777777777777777777 6777777778
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 171 (192)
T 2rfm_A 137 PLIVASKYGRSEIVKKLLELGADISARDLTGLTAE 171 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 8888877777754 3677777777777777764
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=4e-25 Score=126.42 Aligned_cols=107 Identities=24% Similarity=0.316 Sum_probs=96.2
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 115 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNG---ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHT 115 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 5678889999999999999999999999999 45555555 99999999999999999999999999 7888999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ +++.|++++.+|..|.|||
T Consensus 116 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 116 PLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAF 150 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 9999999999865 4888999999999999985
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=3.8e-25 Score=134.66 Aligned_cols=107 Identities=15% Similarity=0.092 Sum_probs=91.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccC-C-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKD-Q-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++.+|..|.||||+|+..|+.+++++|++.|+ +++..+ . |.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~ 226 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA---DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGR 226 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC---CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CcccccCCC
Confidence 56788899999999999999999999999994 444444 2 99999999999999999999999999 889999999
Q ss_pred cHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 81 NFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 81 t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||||+|+..++.++ ++.+|++++.++..|.|||
T Consensus 227 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 262 (282)
T 1oy3_D 227 TPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPC 262 (282)
T ss_dssp CHHHHHHTSSCHHHHHHHHHTTCCCCCCC-------
T ss_pred CHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccc
Confidence 99999999999865 5899999999999999996
No 15
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=1.1e-25 Score=121.54 Aligned_cols=105 Identities=18% Similarity=0.135 Sum_probs=93.4
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
..+|..|+|+||+|+..++.+++++|++.+ .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tp 78 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKG---ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTP 78 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTT---CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 357899999999999999999999999999 45555555 99999999999999999999999999 78899999999
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
||+|+..++.++ +++.|++++.++..|.+|
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 999999999865 588999999999999987
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.4e-25 Score=134.65 Aligned_cols=106 Identities=14% Similarity=0.086 Sum_probs=49.2
Q ss_pred cccCCCCCChHHHHHHHhCCH-HHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQY-QQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~-~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++..|..|.|||++|+..+.. .++++|++.| ++++..+. |+||||+|+..|+.+++++|++.|++ .+..+..|.
T Consensus 45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~G---advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~ 120 (269)
T 4b93_B 45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASG---LGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQA 120 (269)
T ss_dssp ------------------------------CC---CCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCC
T ss_pred ccccCccCCCHHHHHHHhCCHHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCC
Confidence 566788899999999987765 5889999999 55555555 99999999999998888888887766 444555555
Q ss_pred cHHHHHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 81 NFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 81 t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
||+++|+..++.++ ++..|++++.+|..|+||
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~Tp 155 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTP 155 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred CccccccccChHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 55555555444432 244445555555555544
No 17
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=2.3e-25 Score=129.64 Aligned_cols=107 Identities=21% Similarity=0.162 Sum_probs=97.5
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.+ .+++..+. |.||||+|+..++.+++++|++.|++ ++.++..|.|
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENF---DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKT 103 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHH---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCC
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCc
Confidence 5778999999999999999999999999998 44555555 99999999999999999999999998 7889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 138 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPL 138 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 9999999999865 4889999999999999986
No 18
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=4.7e-25 Score=122.24 Aligned_cols=103 Identities=22% Similarity=0.254 Sum_probs=92.0
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHH
Q 045439 7 DQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHY 85 (113)
Q Consensus 7 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~ 85 (113)
...+.|+||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG---ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHL 86 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHH
Confidence 345789999999999999999999999 45555555 99999999999999999999999998 78899999999999
Q ss_pred HHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 86 AMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 86 a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|+..++.++ ++..|++++.+|..|+|||
T Consensus 87 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl 117 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHGADVNAQDKFGKTAF 117 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcCcCCCCCCHH
Confidence 999999865 4888999999999999985
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=2.5e-24 Score=127.79 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=90.9
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhc-cccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLA-AKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~ 80 (113)
++..|..|.||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|++.| ++ ++.+|..|+
T Consensus 100 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~d~~g~ 175 (228)
T 2dzn_A 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENG---ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA-VNWQDKQGW 175 (228)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-SCCCCTTSC
T ss_pred cccCCcCCCCHHHHHHHcCCHhHHHHHHHcC---CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc-ccCcCCCCC
Confidence 4567788999999999999999999999998 45555555 899999999999999999999998 66 788899999
Q ss_pred cHHHHHHHhCChhh---HH-hccCCccccccCCCCCC
Q 045439 81 NFFHYAMTQANDHT---VN-EQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 81 t~l~~a~~~~~~~~---l~-~~~~~~~~~~~~g~t~l 113 (113)
||||+|+..++.++ ++ ..|++++.+|..|+|||
T Consensus 176 t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l 212 (228)
T 2dzn_A 176 TPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAE 212 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGG
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHH
Confidence 99999999998865 46 77999999999999986
No 20
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=2e-24 Score=121.88 Aligned_cols=106 Identities=15% Similarity=0.136 Sum_probs=94.5
Q ss_pred CcccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 2 LIKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 2 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
.++.+|..|+||||+ +..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 102 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQG---ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGA 102 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSC
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCC
Confidence 356788899999999 9999999999999999 45555555 99999999999999999999999998 888999999
Q ss_pred cHHHHHHHhCChhhH---HhccCCccccccCCCCCC
Q 045439 81 NFFHYAMTQANDHTV---NEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 81 t~l~~a~~~~~~~~l---~~~~~~~~~~~~~g~t~l 113 (113)
||||+|+..|+.+++ +.. .+++.+|..|+|||
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l 137 (156)
T 1bd8_A 103 LPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPL 137 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHH
T ss_pred cHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHH
Confidence 999999999998664 666 99999999999985
No 21
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.5e-24 Score=111.31 Aligned_cols=88 Identities=26% Similarity=0.306 Sum_probs=77.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHH
Q 045439 9 YLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAM 87 (113)
Q Consensus 9 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~ 87 (113)
+|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG---ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHH
Confidence 4899999999999999999999999 55566665 99999999999999999999999999 8889999999999999
Q ss_pred HhCChhhH---HhccC
Q 045439 88 TQANDHTV---NEQNV 100 (113)
Q Consensus 88 ~~~~~~~l---~~~~~ 100 (113)
..++.+++ ++.|+
T Consensus 77 ~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 99998664 66665
No 22
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=3.8e-25 Score=131.28 Aligned_cols=105 Identities=14% Similarity=0.044 Sum_probs=94.0
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhh-ccccccccCCCCCcH
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISL-AAKCYELVDDRGWNF 82 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~ 82 (113)
..|..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++. |++ ++.+|..|+||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tp 143 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNR---VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTA 143 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCH
T ss_pred ccccccccccccccccCcHHHHHHHHhCC---CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCH
Confidence 45667899999999999999999999999 45555555 99999999999999999999998 888 88899999999
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||+|+..|+.++ ++..|++++.+|..|+|||
T Consensus 144 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 177 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAF 177 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHH
Confidence 999999999865 5888999999999999985
No 23
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=1.6e-24 Score=122.88 Aligned_cols=106 Identities=18% Similarity=0.180 Sum_probs=92.5
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+. ++.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 105 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRG---ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNL 105 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 46778899999999999 9999999999999 44455555 99999999999999999999999998 7888999999
Q ss_pred HHHHHHHhCChhh---HHhccCC-ccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVS-VRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~-~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|.+ ++.++..|+|||
T Consensus 106 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l 141 (162)
T 1ihb_A 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTAC 141 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHH
Confidence 9999999999865 4788887 689999999985
No 24
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=7.1e-25 Score=126.91 Aligned_cols=102 Identities=23% Similarity=0.208 Sum_probs=91.3
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccC-CCCCcHHH
Q 045439 7 DQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVD-DRGWNFFH 84 (113)
Q Consensus 7 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~g~t~l~ 84 (113)
+..|.||||+|+..|+.++++.|++ + .+++..+. |.||||+|+..++.+++++|+++|++ ++.++ ..|+||||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D---RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T---SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHH
Confidence 4578999999999999999999999 7 45555555 99999999999999999999999999 67777 89999999
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+|+..++.++ ++..|++++.+|..|+|||
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 147 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGADIEVEDERGLTAL 147 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHH
Confidence 9999999865 5889999999999999985
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.91 E-value=2.5e-24 Score=129.96 Aligned_cols=107 Identities=16% Similarity=0.067 Sum_probs=83.8
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|.||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 192 (253)
T 1yyh_A 117 LDARMHDGTTPLILAARLAVEGMLEDLINSH---ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREET 192 (253)
T ss_dssp TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT---CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ccccCCCCCcHHHHHHHcChHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 4566777888888888888888888888877 44444554 88888888888888888888888888 6778888888
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ +++.|++++.+|..|+|||
T Consensus 193 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 227 (253)
T 1yyh_A 193 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR 227 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHH
Confidence 8888888888754 4778888888888888874
No 26
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=9.4e-24 Score=126.11 Aligned_cols=107 Identities=13% Similarity=0.010 Sum_probs=95.6
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccC-C-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKD-Q-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++..|..|.||||+|+..++.+++++|++.|. +++..+ . |.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 109 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 184 (241)
T 1k1a_A 109 LEARNYDGLTALHVAVNTECQETVQLLLERGA---DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-VNAQMYSGS 184 (241)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCBCTTSC
T ss_pred ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCC---CcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCC
Confidence 56678889999999999999999999999994 444444 3 99999999999999999999999999 788999999
Q ss_pred cHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 81 NFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 81 t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||||+|+..++.++ +++.|++++.+|..|+|||
T Consensus 185 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 220 (241)
T 1k1a_A 185 SALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPL 220 (241)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHH
Confidence 99999999999865 4889999999999999997
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.91 E-value=4.6e-24 Score=127.08 Aligned_cols=110 Identities=17% Similarity=0.155 Sum_probs=93.7
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcc--cccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCC--
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNI--VDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDD-- 77 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~--~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-- 77 (113)
++.+|..|+||||+|+..|+.+++++|++.+++.... ...+. |.||||+|+..++.+++++|+++|++ ++..+.
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~ 108 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGAS-VSARATGS 108 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSG
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCc
Confidence 5678899999999999999999999999998442111 33333 99999999999999999999999998 566554
Q ss_pred -----------CCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 78 -----------RGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 78 -----------~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
.|.||||+|+..|+.++ +++.|++++.+|..|+|||
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 79999999999999865 5889999999999999986
No 28
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=6.4e-24 Score=126.90 Aligned_cols=106 Identities=14% Similarity=0.160 Sum_probs=93.5
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
+..+..|.|+||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tp 90 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEM---NDPSQPNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTP 90 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHS---SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 345667889999999999999999999999 45555555 99999999999999999999999999 88899999999
Q ss_pred HHHHHHhCChhh---HHhccCCccccc-cCCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLL-KYGYPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~-~~g~t~l 113 (113)
||+|+..|+.++ +++.|++++.++ ..|+|||
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL 125 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHGAAIFATTLSDGATAF 125 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTG
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHH
Confidence 999999999865 488899999987 5999996
No 29
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=5.9e-24 Score=115.81 Aligned_cols=101 Identities=26% Similarity=0.288 Sum_probs=88.2
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHH
Q 045439 9 YLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAM 87 (113)
Q Consensus 9 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~ 87 (113)
+|+||||+|+..|+.+++++|++.+ .+++..+. |.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG---ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC---CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHH
Confidence 4889999999999999999999998 44444554 89999999999999999999999998 7888999999999999
Q ss_pred HhCChhh---HHhccCCccccccCCCCCC
Q 045439 88 TQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 88 ~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
..++.++ ++..|.+++.+|..|+|||
T Consensus 77 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 105 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAGADVNAKDKNGRTPL 105 (126)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HcChHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 9998865 4788999999999999985
No 30
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=7.7e-25 Score=123.86 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=43.9
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-Ccc-HHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMT-ALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t-~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
.+|..|+||||+|+ .++.+++++|++.| ++++..+. |.| |||+|+..++.+++++|+++|++ ++.+|..|.||
T Consensus 40 ~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g---~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tp 114 (156)
T 1bi7_B 40 APNSYGRRPIQVMM-MGSARVAELLLLHG---AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLP 114 (156)
T ss_dssp CCCSSSCCTTTSSC-TTCHHHHHHHHTTT---CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCH
T ss_pred CCCCCCCCHHHHHH-cCCHHHHHHHHHcC---CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 34444444444442 44444444444444 22233333 444 55555555555555555555555 44555555555
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
||+|+..++.++ +++.|++++.++..|.||
T Consensus 115 l~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 115 VDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp HHHHHHHTCHHHHHHHSSCC-------------
T ss_pred HHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 555555555433 244555555555555544
No 31
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=9.3e-25 Score=123.52 Aligned_cols=105 Identities=15% Similarity=0.086 Sum_probs=91.8
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc-
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN- 81 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t- 81 (113)
+..++.|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+ .++.+++++|++.|++ ++.++..|.|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~tt 80 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAG---ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTR 80 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTT---CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 456788999999999999999999999999 45555555 999999985 8999999999999999 8899999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 115 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV 115 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 9999999999865 5888999999999999985
No 32
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.91 E-value=2e-23 Score=124.75 Aligned_cols=110 Identities=23% Similarity=0.212 Sum_probs=87.3
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCC---CcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCC-
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTA---SNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDD- 77 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~- 77 (113)
++.+|..|+||||+|+..|+.+++++|++.+.++ ..+...+. |.||||+|+..++.+++++|++.|++ ++.++.
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 149 (236)
T 1ikn_D 71 PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPC 149 (236)
T ss_dssp SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCC
Confidence 4556778888888888888888888888877432 11334444 88999999999999999999998888 677776
Q ss_pred CCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 78 RGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 78 ~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
.|.||||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 150 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 188 (236)
T 1ikn_D 150 NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY 188 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHH
Confidence 88999999999888865 4788899999999999886
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=2.1e-24 Score=132.44 Aligned_cols=106 Identities=20% Similarity=0.158 Sum_probs=97.3
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCCCccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQKMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+ |.||||+|+..++.+++++|+++|++ ++.++..|.||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~ 98 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAG---ALKNLLE-NEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTA 98 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---GGGSCCT-TCCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCC---CCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcH
Confidence 5788999999999999999999999999999 6666666 99999999999999999999999999 78899999999
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCC-CCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYG-YPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g-~t~l 113 (113)
||+|+..|+.++ ++..|++++.++..| .|||
T Consensus 99 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L 133 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 133 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHH
Confidence 999999999865 488899999999999 7875
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.91 E-value=3.5e-24 Score=130.42 Aligned_cols=93 Identities=20% Similarity=0.165 Sum_probs=83.7
Q ss_pred CcccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 2 LIKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 2 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
+++.+|..|+||||+|+..|+.+++++|++.+.++..++..+. |.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 1 i~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~ 79 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGH 79 (282)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSC
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCC
Confidence 5788999999999999999999999999999855433566665 99999999999999999999999999 788999999
Q ss_pred cHHHHHHHhCChhhH
Q 045439 81 NFFHYAMTQANDHTV 95 (113)
Q Consensus 81 t~l~~a~~~~~~~~l 95 (113)
||||+|+..++.+++
T Consensus 80 tpL~~A~~~~~~~~v 94 (282)
T 1oy3_D 80 TALHLACRVRAHTCA 94 (282)
T ss_dssp CHHHHHTTTTCHHHH
T ss_pred CHHHHHHHcCCcchh
Confidence 999999999998664
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=9.8e-24 Score=125.92 Aligned_cols=107 Identities=22% Similarity=0.253 Sum_probs=90.9
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++..|..|.||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.|
T Consensus 104 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 179 (237)
T 3b7b_A 104 VNCQDDGGWTPMIWATEYKHVDLVKLLLSKG---SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDS 179 (237)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 4567778899999999999999999999988 44444544 88999999999999999999999988 7888889999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 180 ~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 214 (237)
T 3b7b_A 180 PLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPL 214 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHH
Confidence 9999999988865 4788999999999999985
No 36
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.91 E-value=1.1e-23 Score=125.26 Aligned_cols=106 Identities=27% Similarity=0.251 Sum_probs=68.8
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
+.+|..|.||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.||
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 175 (231)
T 3aji_A 100 NAVNQNGCTPLHYAASKNRHEIAVMLLEGG---ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTP 175 (231)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCH
Confidence 445566666666666666666666666666 33333333 66777777777777777777776666 56666677777
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||+|+..++.++ +++.|++++.+|..|+|||
T Consensus 176 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 209 (231)
T 3aji_A 176 LHLACDEERVEEAKFLVTQGASIYIENKEEKTPL 209 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 777777766643 3666777777777777764
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=1.6e-23 Score=124.06 Aligned_cols=107 Identities=16% Similarity=0.067 Sum_probs=75.4
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|.||||+|+..++.+++++|++.+ .+++..+. |.||||+|+..++.+++++|+++|++ ++.++..|.|
T Consensus 85 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 160 (223)
T 2f8y_A 85 LDARMHDGTTPLILAARLAVEGMLEDLINSH---ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREET 160 (223)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred cccCCCCCCcHHHHHHHhCcHHHHHHHHHcC---CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCcC
Confidence 4455667777777777777777777777777 33444444 77777777777777777777777777 6667777777
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ +++.|++++.+|..|.|||
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 195 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR 195 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHH
Confidence 7777777777654 3677777777777777764
No 38
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=3.6e-24 Score=129.47 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=92.1
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccC--------------C-CccHHHHHHHhCHHHHHHHHHh--
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKD--------------Q-KMTALHLAAARGLARANERIIS-- 66 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--------------~-g~t~l~~a~~~~~~~~~~~Ll~-- 66 (113)
+..|..|+||||+|+..|+.+++++|++.|++ ++..+ . |.||||+|+..++.+++++|++
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGAD---VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCC---cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 44566899999999999999999999999954 44443 3 9999999999999999999999
Q ss_pred -hccccccccCCCCCcHHHHHHHhCC---------hh---hHHhccCCc-------cccccCCCCCC
Q 045439 67 -LAAKCYELVDDRGWNFFHYAMTQAN---------DH---TVNEQNVSV-------RHLLKYGYPTL 113 (113)
Q Consensus 67 -~g~~~~~~~~~~g~t~l~~a~~~~~---------~~---~l~~~~~~~-------~~~~~~g~t~l 113 (113)
.|++ ++.+|..|+||||+|+..++ .+ .++..|+++ +.+|..|+|||
T Consensus 164 ~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 164 HKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp SCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred ccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH
Confidence 8998 88999999999999998777 33 358889888 78999999986
No 39
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.90 E-value=6.5e-24 Score=128.14 Aligned_cols=105 Identities=14% Similarity=0.076 Sum_probs=91.8
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC--------------CccHHHHHHHhCHHHHHHHHHh---h
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ--------------KMTALHLAAARGLARANERIIS---L 67 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--------------g~t~l~~a~~~~~~~~~~~Ll~---~ 67 (113)
.+|..|.||||+|+..|+.+++++|++.|++ ++..+. |.||||+|+..++.+++++|++ .
T Consensus 85 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 85 DEFYQGHSALHIAIEKRSLQCVKLLVENGAD---VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 3457899999999999999999999999954 444432 8999999999999999999999 8
Q ss_pred ccccccccCCCCCcHHHHHHH--hCChh-------h---HHhccCCc-------cccccCCCCCC
Q 045439 68 AAKCYELVDDRGWNFFHYAMT--QANDH-------T---VNEQNVSV-------RHLLKYGYPTL 113 (113)
Q Consensus 68 g~~~~~~~~~~g~t~l~~a~~--~~~~~-------~---l~~~~~~~-------~~~~~~g~t~l 113 (113)
|++ ++.+|..|+||||+|+. .++.+ + ++..|+++ +.+|..|+|||
T Consensus 162 ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 225 (256)
T 2etb_A 162 PAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPL 225 (256)
T ss_dssp CCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHH
T ss_pred CCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHH
Confidence 999 88999999999999998 56554 3 58889999 99999999986
No 40
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=2.6e-24 Score=129.53 Aligned_cols=102 Identities=23% Similarity=0.208 Sum_probs=91.0
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccC-CCCCcHHH
Q 045439 7 DQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVD-DRGWNFFH 84 (113)
Q Consensus 7 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~g~t~l~ 84 (113)
+..|.||||+|+..|+.++++.|++ + .+++..+. |.||||+|+..++.+++++|+++|++ ++.++ ..|.||||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~---~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-D---RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-T---CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-C---CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHH
Confidence 3468999999999999999999999 7 45555555 99999999999999999999999999 67777 88999999
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+|+..|+.++ ++..|++++.+|..|+|||
T Consensus 117 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l 148 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVELGADIEVEDERGLTAL 148 (244)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 9999999865 5888999999999999985
No 41
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=7e-25 Score=127.49 Aligned_cols=106 Identities=11% Similarity=0.075 Sum_probs=89.6
Q ss_pred ccCC-CCCChHHHHHHHhCCH----HHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCH------HHHHHHHHhhcccc
Q 045439 4 KETD-QYLWTPIYYAAYHNQY----QQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGL------ARANERIISLAAKC 71 (113)
Q Consensus 4 ~~~d-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~------~~~~~~Ll~~g~~~ 71 (113)
+.++ ..|+||||+|+..++. +++++|++.| ++++..+. |+||||+|+..++ .+++++|+++|++
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G---advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad- 106 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKG---ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD- 106 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT---CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-
Confidence 3344 6799999999999875 5999999999 55566655 9999999999885 6789999999999
Q ss_pred ccccCCCCC-cHHHHHHHhCCh--------hhHHh-ccCCccccccCCCCCC
Q 045439 72 YELVDDRGW-NFFHYAMTQAND--------HTVNE-QNVSVRHLLKYGYPTL 113 (113)
Q Consensus 72 ~~~~~~~g~-t~l~~a~~~~~~--------~~l~~-~~~~~~~~~~~g~t~l 113 (113)
++.+|..|+ ||||+|+..+.. ++++. .|++++.+|..|+|||
T Consensus 107 in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 107 ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158 (186)
T ss_dssp SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHH
Confidence 899999999 999999985542 23577 8999999999999986
No 42
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.90 E-value=2.3e-23 Score=121.63 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=77.7
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++..|..|+||||+|+..|+.+++++|++.|+ +++..+. |.||||+|+..++.+++++|++.+....+..+..|.|
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 108 (201)
T 3hra_A 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA---DINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGN 108 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCc
Confidence 55667778888888888888888888888873 4444444 7788888888888888877774444326667777777
Q ss_pred HHHHHHHhCChhh---HHhcc-CCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQN-VSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~-~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..+ .+++.+|..|+|||
T Consensus 109 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 144 (201)
T 3hra_A 109 ALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTAL 144 (201)
T ss_dssp SHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHH
Confidence 7777777777754 36666 77777777777764
No 43
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.90 E-value=3e-23 Score=123.41 Aligned_cols=104 Identities=22% Similarity=0.301 Sum_probs=50.8
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHH
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFF 83 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l 83 (113)
.+|..|+||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ .+.++..|.|||
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 110 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLG---VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPL 110 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhC---CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 34445555555555555555555555555 22233332 55555555555555555555555554 444444555555
Q ss_pred HHHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 84 HYAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 84 ~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
|+|+..++.++ ++..|.+++.++..|.||
T Consensus 111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 142 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLEGGANPDAKDHYDATA 142 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 55555544432 244444444444444444
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.90 E-value=3e-23 Score=123.51 Aligned_cols=108 Identities=15% Similarity=0.047 Sum_probs=93.2
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCccccc-----------C-CCccHHHHHHHhCHHHHHHHHHhhcccc
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDK-----------D-QKMTALHLAAARGLARANERIISLAAKC 71 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-----------~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 71 (113)
+.+|..|+||||+|+..|+.+++++|++.|+++ ..... + .|.||||+|+..++.+++++|+++|++
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~- 146 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD- 146 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC-
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 556789999999999999999999999999554 22221 1 289999999999999999999999999
Q ss_pred ccccCCCCCcHHHHHHHhCChh-------hHHhccCCc------cccccCCCCCC
Q 045439 72 YELVDDRGWNFFHYAMTQANDH-------TVNEQNVSV------RHLLKYGYPTL 113 (113)
Q Consensus 72 ~~~~~~~g~t~l~~a~~~~~~~-------~l~~~~~~~------~~~~~~g~t~l 113 (113)
++.+|..|+||||+|+..++.+ .++..|.+. +.+|..|+|||
T Consensus 147 ~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl 201 (232)
T 2rfa_A 147 IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPF 201 (232)
T ss_dssp TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHH
T ss_pred CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHH
Confidence 8899999999999999999984 347888877 58899999985
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.90 E-value=6.1e-23 Score=126.06 Aligned_cols=110 Identities=22% Similarity=0.297 Sum_probs=83.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccc-----------------------------------------
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVD----------------------------------------- 41 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~----------------------------------------- 41 (113)
++.+|..|+||||+|+..|+.+++++|++.|+++...+.
T Consensus 99 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 178 (299)
T 1s70_B 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML 178 (299)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH
Confidence 456677788888888888888888888887744311100
Q ss_pred ----------------cCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHHhCChhh---HHhccCC
Q 045439 42 ----------------KDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAMTQANDHT---VNEQNVS 101 (113)
Q Consensus 42 ----------------~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~---l~~~~~~ 101 (113)
.+. |.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.++ +++.|++
T Consensus 179 ~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad 257 (299)
T 1s70_B 179 RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLCD 257 (299)
T ss_dssp HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Confidence 112 66888888888888888888888887 77788888888888888888854 4788888
Q ss_pred ccccccCCCCCC
Q 045439 102 VRHLLKYGYPTL 113 (113)
Q Consensus 102 ~~~~~~~g~t~l 113 (113)
++.+|..|+|||
T Consensus 258 ~~~~d~~g~t~l 269 (299)
T 1s70_B 258 MEAVNKVGQTAF 269 (299)
T ss_dssp TTCCCTTSCCTT
T ss_pred CCCcCCCCCCHH
Confidence 888888888886
No 46
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=2.9e-23 Score=118.83 Aligned_cols=106 Identities=14% Similarity=0.051 Sum_probs=89.7
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|.||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.++..|.|
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 137 (172)
T 3v30_A 62 PHILAKERESALSLASTGGYTDIVGLLLERD---VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYT 137 (172)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred chhhcccCCCHHHHHHHCCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCC
Confidence 4677889999999999999999999999999 45555555 99999999999999999999999999 8889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
|||+|+..++.++ ++..+.++..++..|.||
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 138 PMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999865 488899999999888887
No 47
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=2.4e-23 Score=118.63 Aligned_cols=101 Identities=18% Similarity=0.103 Sum_probs=92.2
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHH
Q 045439 9 YLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAM 87 (113)
Q Consensus 9 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~ 87 (113)
.|.||||+|+..|+.+++++|++.+ .+++..+. |.||||+|+..++.+++++|++.|++ ++..+..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE---NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS---SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC---CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHH
Confidence 5789999999999999999999998 45555555 99999999999999999999999998 7889999999999999
Q ss_pred HhCChhh---HHhccCCccccccCCCCCC
Q 045439 88 TQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 88 ~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
..++.++ ++..|++++.+|..|+|||
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 106 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVNEYDWNGGTPL 106 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HcCCHHHHHHHHHCCCCCCcCCCCCCCHH
Confidence 9999965 4888999999999999985
No 48
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=2.7e-23 Score=124.67 Aligned_cols=102 Identities=14% Similarity=0.188 Sum_probs=89.9
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHH
Q 045439 8 QYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYA 86 (113)
Q Consensus 8 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 86 (113)
..|.|+||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|+||||+|
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A 110 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEV---DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCA 110 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTT---SSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHH
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHH
Confidence 45789999999999999999999999 45555555 99999999999999999999999999 788999999999999
Q ss_pred HHhCChhh---HHhccCCccccccCCC-CCC
Q 045439 87 MTQANDHT---VNEQNVSVRHLLKYGY-PTL 113 (113)
Q Consensus 87 ~~~~~~~~---l~~~~~~~~~~~~~g~-t~l 113 (113)
+..++.++ ++..|++++.++..|. |||
T Consensus 111 ~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l 141 (239)
T 1ycs_B 111 ASCNNVQVCKFLVESGAAVFAMTYSDMQTAA 141 (239)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCSSSCCCHH
T ss_pred HHcCCHHHHHHHHHcCCCcceecCCCCcchH
Confidence 99999865 5889999999998877 874
No 49
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=2e-23 Score=127.66 Aligned_cols=110 Identities=18% Similarity=0.208 Sum_probs=90.8
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCC-CCC-----------------------------------cccccCC-C
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDP-TAS-----------------------------------NIVDKDQ-K 45 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~-~~~-----------------------------------~~~~~~~-g 45 (113)
++.+|..|+||||+|+..|+.+++++|++.|+ ++. .....+. |
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 67889999999999999999999999999885 210 1111223 7
Q ss_pred ccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHHhCChhh---HHh-ccCCccccccCCCCCC
Q 045439 46 MTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAMTQANDHT---VNE-QNVSVRHLLKYGYPTL 113 (113)
Q Consensus 46 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~---l~~-~~~~~~~~~~~g~t~l 113 (113)
.||||+|+..++.+++++|++.|++ ++.+|..|+||||+|+..|+.++ ++. .|++++.+|..|+|||
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTAL 254 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHH
Confidence 8999999999999999999999998 78889999999999999998865 466 7899999999999985
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.90 E-value=8.1e-24 Score=127.74 Aligned_cols=107 Identities=21% Similarity=0.101 Sum_probs=92.4
Q ss_pred CCCCCChHHHHHHHh---CCHHHHHHHHhcCCCCCccc--------ccCC-CccHHHHHHHhCHHHHHHHHHhhcccccc
Q 045439 6 TDQYLWTPIYYAAYH---NQYQQIYVLLEIDPTASNIV--------DKDQ-KMTALHLAAARGLARANERIISLAAKCYE 73 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~--------~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 73 (113)
+|..|+||||+|+.. |+.+++++|++.|+++.... ..+. |.||||+|+..++.+++++|+++|++ ++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence 688999999999999 99999999999884331111 2223 99999999999999999999999999 77
Q ss_pred ccCCC-------------CCcHHHHHHHhCChhh---HHh---ccCCccccccCCCCCC
Q 045439 74 LVDDR-------------GWNFFHYAMTQANDHT---VNE---QNVSVRHLLKYGYPTL 113 (113)
Q Consensus 74 ~~~~~-------------g~t~l~~a~~~~~~~~---l~~---~~~~~~~~~~~g~t~l 113 (113)
.++.. |.||||+|+..|+.++ ++. .|++++.+|..|+|||
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpL 176 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVL 176 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHH
Confidence 77775 9999999999999965 478 8999999999999986
No 51
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=4.8e-23 Score=124.33 Aligned_cols=104 Identities=19% Similarity=0.089 Sum_probs=58.1
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
.|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++.++...+..+..|.||||
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 129 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEAS---ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHH
Confidence 3556666666666666666666666666 23333333 5666666666666666666666555224455555555555
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
+|+..++.++ ++..|++++.+|..|+||
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHADVNAVDDLGKSA 160 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCCTTCBCTTSCBH
T ss_pred HHHHcChHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 5555555533 245555555555555554
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.89 E-value=5.1e-23 Score=128.41 Aligned_cols=107 Identities=15% Similarity=0.069 Sum_probs=80.5
Q ss_pred ccc-CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCH---HHHHHHHHhhc---------
Q 045439 3 IKE-TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGL---ARANERIISLA--------- 68 (113)
Q Consensus 3 ~~~-~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~---~~~~~~Ll~~g--------- 68 (113)
++. +|..|+||||+|+..|+.+++++|++.| ++++..+. |+||||+|+..++ .++++.|++++
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G---ad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~ 199 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHG---SNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS 199 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC
Confidence 455 7899999999999999999999999999 44455555 8888888888766 23333333332
Q ss_pred -----------------------------c---------------------------------------------ccccc
Q 045439 69 -----------------------------A---------------------------------------------KCYEL 74 (113)
Q Consensus 69 -----------------------------~---------------------------------------------~~~~~ 74 (113)
. . ++.
T Consensus 200 ~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~-~n~ 278 (327)
T 1sw6_A 200 MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM-LNA 278 (327)
T ss_dssp TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT-TTC
T ss_pred CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC-CCC
Confidence 1 1 455
Q ss_pred cCCCCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 75 VDDRGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 75 ~~~~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+|..|+||||+|+..|+.++ |++.|++++.+|..|+|||
T Consensus 279 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 320 (327)
T 1sw6_A 279 QDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 320 (327)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 67778888888888888754 4788889999999999886
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.89 E-value=2.4e-23 Score=126.77 Aligned_cols=104 Identities=14% Similarity=0.060 Sum_probs=91.0
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccC---------------CCccHHHHHHHhCHHHHHHHHHh---h
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKD---------------QKMTALHLAAARGLARANERIIS---L 67 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~---------------~g~t~l~~a~~~~~~~~~~~Ll~---~ 67 (113)
+|..|+||||+|+..|+.+++++|++.|+++ +..+ .|.||||+|+..++.+++++|++ .
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 173 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADV---QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ 173 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT---TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc---CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC
Confidence 6678999999999999999999999999554 3332 28999999999999999999999 8
Q ss_pred ccccccccCCCCCcHHHHHHHhCC---------hh---hHHhccCCcc-------ccccCCCCCC
Q 045439 68 AAKCYELVDDRGWNFFHYAMTQAN---------DH---TVNEQNVSVR-------HLLKYGYPTL 113 (113)
Q Consensus 68 g~~~~~~~~~~g~t~l~~a~~~~~---------~~---~l~~~~~~~~-------~~~~~g~t~l 113 (113)
|++ ++.+|..|+||||+|+..++ .+ .++..|++++ .+|..|+|||
T Consensus 174 gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL 237 (273)
T 2pnn_A 174 PAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPL 237 (273)
T ss_dssp CCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred CCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHH
Confidence 998 88999999999999999887 33 3588898886 5899999986
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=3.8e-23 Score=132.73 Aligned_cols=106 Identities=17% Similarity=0.167 Sum_probs=78.6
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
+..|..|+||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.||
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~ 347 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIKHG---VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSP 347 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHT---CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC---ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCH
Confidence 455667777777777777777777777777 44444444 77888888888888888888888777 67777788888
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||+|+..|+.++ ++..|++++.+|..|+|||
T Consensus 348 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l 381 (437)
T 1n11_A 348 LHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL 381 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHH
T ss_pred HHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHH
Confidence 888888777754 4777888888888888774
No 55
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.89 E-value=9.1e-23 Score=121.02 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=50.8
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
.|..|+||||+|+..|+.+++++|++.|..+ +++..+. |.||||+|+..++.+++++|++.|++ ++.++..|.||||
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~ 145 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKP-DLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLH 145 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-ccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHH
Confidence 3444555555555555555555555544221 2222222 45555555555555555555555554 4445555555555
Q ss_pred HHHHhCChhh---HHhcc-CCccccccCCCCC
Q 045439 85 YAMTQANDHT---VNEQN-VSVRHLLKYGYPT 112 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~-~~~~~~~~~g~t~ 112 (113)
+|+..++.++ ++..| .+++.+|..|+||
T Consensus 146 ~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~ 177 (228)
T 2dzn_A 146 RAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177 (228)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCH
T ss_pred HHHHcCCHHHHHHHHhcCcccccCcCCCCCCH
Confidence 5555555433 24444 5555555555554
No 56
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.89 E-value=8.9e-23 Score=127.28 Aligned_cols=107 Identities=19% Similarity=0.187 Sum_probs=96.4
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++..+..|.|
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t 126 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHG---ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFT 126 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCC
Confidence 4677889999999999999999999999999 45555555 99999999999999999999999999 7889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++..+..|.+|+
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l 161 (351)
T 3utm_A 127 PLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAV 161 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcch
Confidence 9999999999865 5889999999999998864
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=2.4e-23 Score=127.31 Aligned_cols=89 Identities=18% Similarity=0.201 Sum_probs=80.2
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHh-hccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIIS-LAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~ 80 (113)
.+..|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++ .|++ ++.+|..|.
T Consensus 176 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g---ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad-~~~~d~~g~ 251 (276)
T 4hbd_A 176 NAKASQAGQTALMLAVSHGRVDVVKALLACE---ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD-ISLTDRDGS 251 (276)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC-TTCCCTTSC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CcCcCCCCC
Confidence 3456778999999999999999999999999 55555555 9999999999999999999999 8998 889999999
Q ss_pred cHHHHHHHhCChhhH
Q 045439 81 NFFHYAMTQANDHTV 95 (113)
Q Consensus 81 t~l~~a~~~~~~~~l 95 (113)
||||+|+..|+.+++
T Consensus 252 TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 252 TALMVALDAGQSEIA 266 (276)
T ss_dssp CHHHHHHHHTCHHHH
T ss_pred CHHHHHHHcCCHHHH
Confidence 999999999999765
No 58
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=123.14 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=73.4
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHH
Q 045439 8 QYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYA 86 (113)
Q Consensus 8 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 86 (113)
..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++. +..|.||||+|
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~Lh~A 173 (261)
T 2xai_A 99 SDLASPIHEAARRGHVECVNSLIAYG---GNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VNQ-GKGQDSPLHAV 173 (261)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC-TTC-CBTTBCHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcC---CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CCC-CCCCCChHHHH
Confidence 34667777777777777777777776 33444444 77888888888888888888888777 443 67788888888
Q ss_pred HHhCChhh---HHhccCCccccccCCCCCC
Q 045439 87 MTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 87 ~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+..++.++ +++.|++++.+|..|+|||
T Consensus 174 ~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl 203 (261)
T 2xai_A 174 ARTASEELACLLMDFGADTQAKNAEGKRPV 203 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCChh
Confidence 88887754 4777888888888888885
No 59
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.89 E-value=1.4e-22 Score=120.02 Aligned_cols=104 Identities=20% Similarity=0.163 Sum_probs=49.8
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
+|..|+||||+|+..++.+++++|++.++. .++..+. |.||||+|+..++.+++++|++.|++ ++..+..|.||||
T Consensus 54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~ 130 (223)
T 2f8y_A 54 QDNMGRTPLHAAVSADAQGVFQILIRNRAT--DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALH 130 (223)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHBTTS--CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHH
Confidence 344444444444444444444444444421 1122222 45555555555555555555555554 4444555555555
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
+|+..++.++ ++..|++++.+|..|+||
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 161 (223)
T 2f8y_A 131 WAAAVNNVDAAVVLLKNGANKDMQNNREETP 161 (223)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence 5555555433 244555555555555554
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.89 E-value=1.1e-22 Score=118.72 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=94.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhc-cccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLA-AKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~ 80 (113)
++.+|..|+||||+|+..++.+++++|++.+. .+++..+. |.||||+|+..++.+++++|++.| ++ ++.++..|.
T Consensus 65 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~ 141 (201)
T 3hra_A 65 INLQNSISDSPYLYAGAQGRTEILAYMLKHAT--PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED-IDFQNDFGY 141 (201)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC--CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC-TTCCCTTSC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccC--cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cCCCCCCCC
Confidence 46788899999999999999999999995432 34455555 999999999999999999999999 66 888999999
Q ss_pred cHHHHHHHhCC-----hh---hHHhccCCccccccCCCCCC
Q 045439 81 NFFHYAMTQAN-----DH---TVNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 81 t~l~~a~~~~~-----~~---~l~~~~~~~~~~~~~g~t~l 113 (113)
||||+|+..+. .+ .+++.|++++.+|..|+|||
T Consensus 142 t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 182 (201)
T 3hra_A 142 TALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAM 182 (201)
T ss_dssp CHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHH
Confidence 99999999887 43 45899999999999999985
No 61
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.89 E-value=1.3e-22 Score=122.95 Aligned_cols=106 Identities=12% Similarity=0.048 Sum_probs=68.1
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|.||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++.|++ .+ .+..|.|
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~g~t 103 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHG---AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQ-PESDLAS 103 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SS-CSCTTCC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CC-CCCCCCC
Confidence 4556666777777777777777777777776 33344443 66777777777777777777776666 33 2344666
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..|+.++ ++..|.+++.++..|+|||
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 138 (261)
T 2xai_A 104 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPL 138 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHH
Confidence 7777766666644 3566666666666666654
No 62
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.89 E-value=1.2e-22 Score=121.26 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=57.1
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHh----cCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLE----IDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDD 77 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~----~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 77 (113)
++.+|..|+||||+|+..|+.+++++|++ .+ .+++..+. |.||||+|+..++.+++++|++.|++ ++..+.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~ 77 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGG---RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDR 77 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTT---CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcC---CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCC
Confidence 34556666666666666666666666654 34 23333333 56666666666666666666666655 455555
Q ss_pred CCCcHHHHHHHhCChhhH---HhccC----CccccccCCCCC
Q 045439 78 RGWNFFHYAMTQANDHTV---NEQNV----SVRHLLKYGYPT 112 (113)
Q Consensus 78 ~g~t~l~~a~~~~~~~~l---~~~~~----~~~~~~~~g~t~ 112 (113)
.|.||||+|+..++.+++ +..+. +++..+..|+||
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~ 119 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTA 119 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcH
Confidence 666666666666555432 44443 555555555555
No 63
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.89 E-value=6.4e-23 Score=122.52 Aligned_cols=109 Identities=18% Similarity=0.149 Sum_probs=95.5
Q ss_pred CcccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccc-----ccccc
Q 045439 2 LIKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAK-----CYELV 75 (113)
Q Consensus 2 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~-----~~~~~ 75 (113)
.++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++.++. ..+..
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 113 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAG---CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKAT 113 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC---CCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhcc
Confidence 46788899999999999999999999999999 44555555 99999999999999999999998863 24667
Q ss_pred CCCCCcHHHHHHHhCChhh---HHhccCCcccccc-CCCCCC
Q 045439 76 DDRGWNFFHYAMTQANDHT---VNEQNVSVRHLLK-YGYPTL 113 (113)
Q Consensus 76 ~~~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~-~g~t~l 113 (113)
+..|.||||+|+..++.++ ++..|++++.++. .|+|||
T Consensus 114 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTAL 155 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHH
Confidence 8899999999999999865 5889999999998 999986
No 64
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.89 E-value=1.5e-22 Score=120.72 Aligned_cols=107 Identities=21% Similarity=0.180 Sum_probs=65.2
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ .+.++..|.|
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 79 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAG---ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGST 79 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCC
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcC---CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCc
Confidence 3455666666666666666666666666666 33333333 66666666666666666666666665 5556666666
Q ss_pred HHHHHHHhCChhhH---Hhcc-CCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHTV---NEQN-VSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~l---~~~~-~~~~~~~~~g~t~l 113 (113)
|||+|+..|+.+++ +..+ .+++..+..|.|||
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 66666666665432 4444 55555666666553
No 65
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=7.5e-23 Score=131.40 Aligned_cols=107 Identities=18% Similarity=0.131 Sum_probs=81.2
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++..|..|+||||+|+..|+.+++++|++.|. +++..+. |.||||+|+..|+.+++++|++.|++ ++.++..|.|
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~---~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t 82 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGA---SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQT 82 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTTC---CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCC
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCC
Confidence 45677888889999988888888898888884 4444444 88888888888888888888888888 7778888888
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..|+.++ +++.|++++..+..|.|||
T Consensus 83 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 117 (437)
T 1n11_A 83 PLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 117 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 8888888888865 4777888888888888875
No 66
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=3.5e-23 Score=130.36 Aligned_cols=106 Identities=14% Similarity=0.101 Sum_probs=92.3
Q ss_pred cCCCCCChHHHHHHHhC--CHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhcccc----ccccCC
Q 045439 5 ETDQYLWTPIYYAAYHN--QYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKC----YELVDD 77 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~----~~~~~~ 77 (113)
.+|..|.||||+|+..| +.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++. ++..|.
T Consensus 133 ~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g---a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 209 (364)
T 3ljn_A 133 VKHCKGQTALHWCVGLGPEYLEMIKILVQLG---ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK 209 (364)
T ss_dssp EEEESCCCHHHHHHHSCGGGHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT
T ss_pred cCCCCCCCHHHHHHHcCCchHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC
Confidence 37778999999999999 999999999999 45555555 999999999999999999999988762 467788
Q ss_pred CCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 78 RGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 78 ~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
.|+||||+|+..|+.++ +++.|++++.+|..|+|||
T Consensus 210 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 248 (364)
T 3ljn_A 210 QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPL 248 (364)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 99999999999999865 4888999999999999986
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=7.1e-24 Score=126.70 Aligned_cols=106 Identities=14% Similarity=0.084 Sum_probs=88.7
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccC-CCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVD-DRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~~g~ 80 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++.|++ ++..+ ..|.
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g---a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~ 122 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIVDFLITAG---ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGA 122 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCC
Confidence 5678899999999999999999999999999 55556665 99999999999999999999999999 66665 7999
Q ss_pred cHHHHH--HHhCChhh---HHhccCCccccccCCCCC
Q 045439 81 NFFHYA--MTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 81 t~l~~a--~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
||||+| +..++.++ ++..|++++.+|..|.||
T Consensus 123 tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~ 159 (229)
T 2vge_A 123 TAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYA 159 (229)
T ss_dssp CTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEE
T ss_pred CHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHH
Confidence 999999 88887754 466676666665555443
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=1.3e-22 Score=116.02 Aligned_cols=103 Identities=20% Similarity=0.177 Sum_probs=91.7
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHH
Q 045439 7 DQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHY 85 (113)
Q Consensus 7 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~ 85 (113)
...+.+++++|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ .+..+..|.||||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANG---ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRL 86 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHH
Confidence 345688999999999999999999999 45555555 99999999999999999999999998 78899999999999
Q ss_pred HHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 86 AMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 86 a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|+..++.++ ++..|++++.+|..|+|||
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 117 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADVNANDMEGHTPL 117 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 999999865 5889999999999999985
No 69
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=3.7e-22 Score=110.50 Aligned_cols=89 Identities=27% Similarity=0.393 Sum_probs=81.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 115 (136)
T 2jab_A 40 VNAKDEYGLTPLYLATAHGHLEIVEVLLKNG---ADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKT 115 (136)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCC
Confidence 5678889999999999999999999999999 55555555 99999999999999999999999999 7889999999
Q ss_pred HHHHHHHhCChhhH
Q 045439 82 FFHYAMTQANDHTV 95 (113)
Q Consensus 82 ~l~~a~~~~~~~~l 95 (113)
|||+|+..++.+++
T Consensus 116 pl~~A~~~~~~~~~ 129 (136)
T 2jab_A 116 AFDISIGNGNEDLA 129 (136)
T ss_dssp HHHHHHHTTCHHHH
T ss_pred HHHHHHHCCCHHHH
Confidence 99999999998764
No 70
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.88 E-value=2.7e-22 Score=123.06 Aligned_cols=97 Identities=15% Similarity=0.106 Sum_probs=54.4
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
+..|..|+||||+|+..|+.+++++|++.|. +++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~ 128 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGW---AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTP 128 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC---CSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 3445556666666666666666666666652 3333333 66666666666666666666666655 45555566666
Q ss_pred HHHHHHhCChhh---HHhccCCccc
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRH 104 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~ 104 (113)
||+|+..++.++ ++..|.+++.
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQP 153 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCC
Confidence 666665555533 2444444443
No 71
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=122.45 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=77.6
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHH
Q 045439 8 QYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYA 86 (113)
Q Consensus 8 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 86 (113)
..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++ .+..|.||||+|
T Consensus 155 ~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A 229 (285)
T 3d9h_A 155 SDLASPIHEAARRGHVECVNSLIAYG---GNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAV 229 (285)
T ss_dssp CTTSCHHHHHHHHTCHHHHHHHHHTT---CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHH
Confidence 34777777777777777777777777 34444444 78888888888888888888888887 45 377888888888
Q ss_pred HHhCChhh---HHhccCCccccccCCCCCC
Q 045439 87 MTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 87 ~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+..++.++ ++..|++++.+|..|+|||
T Consensus 230 ~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 259 (285)
T 3d9h_A 230 VRTASEELACLLMDFGADTQAKNAEGKRPV 259 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 88888754 4778888888888888885
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.88 E-value=5.1e-23 Score=124.40 Aligned_cols=106 Identities=22% Similarity=0.127 Sum_probs=90.7
Q ss_pred CCCCChHHHHHH---HhCCHHHHHHHHhcCCCC--------CcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccc
Q 045439 7 DQYLWTPIYYAA---YHNQYQQIYVLLEIDPTA--------SNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYEL 74 (113)
Q Consensus 7 d~~g~t~l~~a~---~~~~~~~~~~ll~~~~~~--------~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 74 (113)
|..|+||||+|+ ..|+.+++++|++.|.++ ..+...+. |.||||+|+..++.+++++|+++|++ ++.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCc
Confidence 467999999999 679999999999987331 12333333 99999999999999999999999999 777
Q ss_pred cC--------------CCCCcHHHHHHHhCChhh---HHh---ccCCccccccCCCCCC
Q 045439 75 VD--------------DRGWNFFHYAMTQANDHT---VNE---QNVSVRHLLKYGYPTL 113 (113)
Q Consensus 75 ~~--------------~~g~t~l~~a~~~~~~~~---l~~---~~~~~~~~~~~g~t~l 113 (113)
.+ ..|.||||+|+..|+.++ ++. .|++++.+|..|+|||
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL 180 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence 77 589999999999999865 478 8999999999999986
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.88 E-value=9.2e-23 Score=124.15 Aligned_cols=108 Identities=18% Similarity=0.103 Sum_probs=91.8
Q ss_pred cCCCCCChHHHHHHHh---CCHHHHHHHHhcCCCCC--------cccccCC-CccHHHHHHHhCHHHHHHHHHhhccccc
Q 045439 5 ETDQYLWTPIYYAAYH---NQYQQIYVLLEIDPTAS--------NIVDKDQ-KMTALHLAAARGLARANERIISLAAKCY 72 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~--------~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 72 (113)
..|..|+||||+|+.. |+.+++++|++.|++.. .....+. |.||||+|+..++.+++++|+++|++ +
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~ 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-V 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-c
Confidence 3478999999999987 99999999999873211 1122333 99999999999999999999999999 7
Q ss_pred cccCC--------------CCCcHHHHHHHhCChhh---HHh---ccCCccccccCCCCCC
Q 045439 73 ELVDD--------------RGWNFFHYAMTQANDHT---VNE---QNVSVRHLLKYGYPTL 113 (113)
Q Consensus 73 ~~~~~--------------~g~t~l~~a~~~~~~~~---l~~---~~~~~~~~~~~g~t~l 113 (113)
+.++. .|.||||+|+..|+.++ ++. .|++++.+|..|+|||
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpL 188 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVL 188 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHH
Confidence 77776 79999999999999865 478 8999999999999986
No 74
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.88 E-value=2.1e-22 Score=123.66 Aligned_cols=103 Identities=19% Similarity=0.147 Sum_probs=92.8
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHH
Q 045439 7 DQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHY 85 (113)
Q Consensus 7 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~ 85 (113)
+..|.|+|++|+..|+.+++++|++.| .+++..+. |.||||+|+..|+.+++++|+++|++ ++..|..|.||||+
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERG---ADINYANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHA 112 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHC---CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHH
Confidence 346789999999999999999999999 45555555 99999999999999999999999999 78899999999999
Q ss_pred HHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 86 AMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 86 a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|+..|+.++ ++..|++++..+..|.|||
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 999999965 4888999999999999985
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.88 E-value=3e-22 Score=112.73 Aligned_cols=99 Identities=17% Similarity=0.172 Sum_probs=88.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHH
Q 045439 10 LWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAMT 88 (113)
Q Consensus 10 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~ 88 (113)
..++|+.|+..|+.+++++|++.|.+ .+. +. |.||||+|+..++.+++++|++.|++ ++.++..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~---~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP---FTT-DWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC---CCC-CTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC---CCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 35899999999999999999999943 332 33 99999999999999999999999999 78899999999999999
Q ss_pred hCChhh---HHhccCCccccccCCCCCC
Q 045439 89 QANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 89 ~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
.++.++ ++..|++++.+|..|+|||
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 104 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTAL 104 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 999865 4888999999999999985
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.88 E-value=2.1e-22 Score=114.53 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=91.9
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
.|..|.|+|+.|+..|+.++++.|++.+. ......+. |.||||+|+..++.+++++|++.|++ ++.+|..|+||||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 80 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQS--VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLH 80 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTT--TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCC--CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHH
Confidence 46778999999999999999999998653 23444444 89999999999999999999999999 8889999999999
Q ss_pred HHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 85 YAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 85 ~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+|+..++.++ ++..|++++.+|..|+|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 112 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVNVADLWKFTPL 112 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred HHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 9999999965 4889999999999999986
No 77
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=9.5e-22 Score=111.40 Aligned_cols=96 Identities=20% Similarity=0.173 Sum_probs=83.5
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++..+.++..|.|
T Consensus 63 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 63 PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ---ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139 (162)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence 4677889999999999999999999999999 45555555 9999999999999999999999999855888999999
Q ss_pred HHHHHHHhCChhh---HHhccCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVS 101 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~ 101 (113)
|||+|+..++.++ +++.|++
T Consensus 140 ~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 140 ACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999865 4677654
No 78
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=5.1e-22 Score=114.35 Aligned_cols=103 Identities=14% Similarity=0.200 Sum_probs=89.2
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHH
Q 045439 8 QYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYA 86 (113)
Q Consensus 8 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 86 (113)
..+.++|+.|+..|+.+++++|++.+. .+++..+. |.||||+|+..++.+++++|++.|++ ++.++..|.||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTE--NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLA 79 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTT--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHH
Confidence 357889999999999999999999853 34445555 99999999999999999999999999 888999999999999
Q ss_pred HHhCChhh---HHhccCCccccccCCCCCC
Q 045439 87 MTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 87 ~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+..++.++ ++..|++++.+|..|+|||
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 109 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPL 109 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 99999865 4889999999999999986
No 79
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=1e-21 Score=120.36 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=84.8
Q ss_pred cccCCCCCChHHHHHHHh---CCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCC
Q 045439 3 IKETDQYLWTPIYYAAYH---NQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDR 78 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~ 78 (113)
++..|..|+||||+|+.. ++.+++++|++.| ++++..+. |.||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g---a~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~ 237 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS---GNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANES 237 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC---SCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCC---CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCC
Confidence 566688999999999999 8999999999999 56666666 99999999999999999999999999 8999999
Q ss_pred CCcHHHHHHHhCChhh---HHhccCC
Q 045439 79 GWNFFHYAMTQANDHT---VNEQNVS 101 (113)
Q Consensus 79 g~t~l~~a~~~~~~~~---l~~~~~~ 101 (113)
|.||||+|+..|+.++ ++..|.+
T Consensus 238 g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 238 GETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999865 4666654
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.87 E-value=1.1e-21 Score=123.46 Aligned_cols=110 Identities=18% Similarity=0.083 Sum_probs=72.3
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCc--------------------------------ccc---------
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASN--------------------------------IVD--------- 41 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~--------------------------------~~~--------- 41 (113)
++.+|..|+||||+|+..|+.+++++|++.|++... .+.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 125 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDERE 125 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHh
Confidence 456677777777777777777777777777742211 000
Q ss_pred --------cCC-CccHHHHHHHhC--HHHHHHHHHhhccccccccCCCCCcHHHHHHHhCChhh---HHhccCC-----c
Q 045439 42 --------KDQ-KMTALHLAAARG--LARANERIISLAAKCYELVDDRGWNFFHYAMTQANDHT---VNEQNVS-----V 102 (113)
Q Consensus 42 --------~~~-g~t~l~~a~~~~--~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~---l~~~~~~-----~ 102 (113)
.+. |.||||+|+..+ +.+++++|+++|++ ++.+|..|.||||+|+..|+.++ ++..|.+ +
T Consensus 126 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 204 (364)
T 3ljn_A 126 VNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL 204 (364)
T ss_dssp EEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT
T ss_pred hhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc
Confidence 222 667777777777 67777777777776 56667777777777777777644 3566666 7
Q ss_pred cccccCCCCCC
Q 045439 103 RHLLKYGYPTL 113 (113)
Q Consensus 103 ~~~~~~g~t~l 113 (113)
+..|..|+|||
T Consensus 205 ~~~~~~g~t~L 215 (364)
T 3ljn_A 205 DYANKQGNSHL 215 (364)
T ss_dssp TCCCTTCCCTT
T ss_pred cccCCCCCcHH
Confidence 77777777775
No 81
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.87 E-value=8.2e-22 Score=105.68 Aligned_cols=89 Identities=21% Similarity=0.251 Sum_probs=77.5
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
....|..|.|+||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t 92 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANG---ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKT 92 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCc
Confidence 3456889999999999999999999999999 55555555 99999999999999999999999999 8889999999
Q ss_pred HHHHHHHhCChhhH
Q 045439 82 FFHYAMTQANDHTV 95 (113)
Q Consensus 82 ~l~~a~~~~~~~~l 95 (113)
|||+|+..++.+++
T Consensus 93 pl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 93 AFDISIDNGNEDLA 106 (110)
T ss_dssp HHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHH
Confidence 99999999998765
No 82
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.87 E-value=9.1e-22 Score=122.72 Aligned_cols=104 Identities=23% Similarity=0.198 Sum_probs=93.7
Q ss_pred CCCCCChHHHHHHHh---CCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 6 TDQYLWTPIYYAAYH---NQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
.+..|.||||+|+.. +..+++++|++.| .+++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|+|
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t 282 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKG---ANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQT 282 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcC---CCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 456799999999999 5589999999999 55555555 99999999999999999999999999 8889999999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ ++..|++++.+|..|+||+
T Consensus 283 ~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal 317 (351)
T 3utm_A 283 ALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAA 317 (351)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChh
Confidence 9999999999965 5899999999999999985
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=2.9e-21 Score=105.07 Aligned_cols=95 Identities=25% Similarity=0.312 Sum_probs=84.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|.||||+|+..++.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.|
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 103 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG---ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRT 103 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC---CCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CcccCCCCCC
Confidence 4667889999999999999999999999999 45555555 99999999999999999999999999 7889999999
Q ss_pred HHHHHHHhCChhhH---HhccCC
Q 045439 82 FFHYAMTQANDHTV---NEQNVS 101 (113)
Q Consensus 82 ~l~~a~~~~~~~~l---~~~~~~ 101 (113)
||++|+..++.+++ ++.|++
T Consensus 104 ~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 104 PLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999998654 666654
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=2.4e-21 Score=115.32 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=80.2
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCCCccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQKMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
++.+|..|.||||+|+..|+.+++++|++.+.+........ |.||||+|+..++.+++++|++.|++ ++..+..|.||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 112 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL-NSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSC 112 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT-TBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCc-CCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 45567778888888888888888888888775432222111 77888888888888888888888777 67777788888
Q ss_pred HHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
||+|+..++.++ ++..|.+++.++..|.|||
T Consensus 113 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 146 (240)
T 3eu9_A 113 IHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPL 146 (240)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHH
Confidence 888888877754 4677788888887777764
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=3.1e-22 Score=110.83 Aligned_cols=94 Identities=16% Similarity=0.089 Sum_probs=82.3
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC--CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ--KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++.+|..|+||||+|+. ++.+++++|++.|++ ++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~ 112 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE---PNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGR 112 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC---SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSS
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC---CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCC
Confidence 56788999999999999 999999999999954 444443 79999999999999999999999999 889999999
Q ss_pred cHHHHHHHhCChhhH---HhccCC
Q 045439 81 NFFHYAMTQANDHTV---NEQNVS 101 (113)
Q Consensus 81 t~l~~a~~~~~~~~l---~~~~~~ 101 (113)
||||+|+..++.+++ ++.|++
T Consensus 113 tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 113 LPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999998654 666654
No 86
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.87 E-value=7.2e-22 Score=125.06 Aligned_cols=110 Identities=18% Similarity=0.106 Sum_probs=92.3
Q ss_pred cccCCCCCChHHHHHHHhC---CHHHHHHHHhcCCCCCc-----ccccCC-CccHHHHHHHhCHHHHHHHHHhhc-cccc
Q 045439 3 IKETDQYLWTPIYYAAYHN---QYQQIYVLLEIDPTASN-----IVDKDQ-KMTALHLAAARGLARANERIISLA-AKCY 72 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~-----~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~ 72 (113)
++..|..|+||||+|+..+ +.+++++|++.|.++.. ....+. |.||||+|+..++.+++++|++.+ ++ +
T Consensus 228 ~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~ 306 (373)
T 2fo1_E 228 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-K 306 (373)
T ss_dssp TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-T
T ss_pred hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-c
Confidence 4667889999999999887 88999999999855411 011233 899999999999999999999887 66 8
Q ss_pred cccCCCCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 73 ELVDDRGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 73 ~~~~~~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+.+|..|.||||+|+..|+.++ ++..|++++.+|..|+|||
T Consensus 307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350 (373)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHH
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHH
Confidence 8899999999999999999865 4888999999999999985
No 87
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=2.7e-22 Score=118.94 Aligned_cols=104 Identities=18% Similarity=0.177 Sum_probs=80.9
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhc-CCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEI-DPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++.+|..|+||||+|+..|+.+++++|++. | ++++..+. |.||||+|+..++.+++++|++.|++ ++.+|..|.
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g---~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~ 174 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPN---IELNQQNKLGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKK 174 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTT---CCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCC---CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCC
Confidence 567889999999999999999999999998 8 45555665 99999999999999999999999999 889999999
Q ss_pred cHHHHHHHhCChhhH---HhccCCccccccCCC
Q 045439 81 NFFHYAMTQANDHTV---NEQNVSVRHLLKYGY 110 (113)
Q Consensus 81 t~l~~a~~~~~~~~l---~~~~~~~~~~~~~g~ 110 (113)
|||++|+..++.+++ +..+.....++..++
T Consensus 175 t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 175 LAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp CHHHHCCSHHHHHHHC-----------------
T ss_pred CHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999998888765 666777777666554
No 88
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.86 E-value=2.7e-21 Score=117.53 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=83.8
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHH
Q 045439 7 DQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHY 85 (113)
Q Consensus 7 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~ 85 (113)
+..|+||||+|+..|+.+++++|++.|. +++..+. |.||||+|+..++.+++++|+++|++ ++..+..|.||||+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 111 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGA---DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFME 111 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHH
Confidence 6678899999999999999999998884 4444444 88999999999999999999998888 77788889999999
Q ss_pred HHHhCChhh---HHhccCCcccc----------ccCCCCCC
Q 045439 86 AMTQANDHT---VNEQNVSVRHL----------LKYGYPTL 113 (113)
Q Consensus 86 a~~~~~~~~---l~~~~~~~~~~----------~~~g~t~l 113 (113)
|+..++.++ ++..|.+++.. +..|.|||
T Consensus 112 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 112 AAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHH
T ss_pred HHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHH
Confidence 998888865 47778888776 66777764
No 89
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=4.8e-22 Score=108.29 Aligned_cols=83 Identities=23% Similarity=0.213 Sum_probs=75.0
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 33 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 108 (123)
T 3aaa_C 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLKG---ADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD-KTVKGPDGLT 108 (123)
T ss_dssp TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred cCccCCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 5678889999999999999999999999999 55555655 99999999999999999999999999 8899999999
Q ss_pred HHHHHHHh
Q 045439 82 FFHYAMTQ 89 (113)
Q Consensus 82 ~l~~a~~~ 89 (113)
|+++|...
T Consensus 109 ~l~~A~~~ 116 (123)
T 3aaa_C 109 AFEATDNQ 116 (123)
T ss_dssp HHHHCCCH
T ss_pred HHHHhCCH
Confidence 99998543
No 90
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.86 E-value=4.9e-22 Score=121.93 Aligned_cols=104 Identities=12% Similarity=0.024 Sum_probs=80.4
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-C-ccHHHHHHHhCHHHHHHHHHhhccccccccCC-CC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-K-MTALHLAAARGLARANERIISLAAKCYELVDD-RG 79 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g-~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-~g 79 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+. | .||||+|+..++.+++++|+++|+.. .+. .|
T Consensus 88 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g 161 (285)
T 3kea_A 88 DSQFDDKGNTALYYAVDSGNMQTVKLFVKKN---WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAIL 161 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC---GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTH
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC---CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCC
Confidence 4566777888888888888888888888887 45555554 6 68888888888888888888887762 222 77
Q ss_pred CcHHHHHHHhCChhh---HHhccCCccccccCCCCC
Q 045439 80 WNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 80 ~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
.||||+|+..|+.++ ++..|++++.++..|+||
T Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~ 197 (285)
T 3kea_A 162 LSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIP 197 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCT
T ss_pred ccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCCh
Confidence 888888888888755 477888899989889887
No 91
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=120.98 Aligned_cols=98 Identities=13% Similarity=0.024 Sum_probs=85.6
Q ss_pred CCCCCChHHHHHHHh---CCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 6 TDQYLWTPIYYAAYH---NQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
.|..|+||||+|+.. ++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g---advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~T 261 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNG---GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGET 261 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHS---SCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCC
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 578899999999997 8999999999999 55555555 99999999999999999999999999 8899999999
Q ss_pred HHHHHHHhCChhhH---HhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHTV---NEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~l---~~~~~~~~~~~~~g~t~l 113 (113)
||++|+..++.+++ +..|.+ .|.|||
T Consensus 262 pL~~A~~~~~~~iv~~Ll~~ga~------~g~tpL 290 (301)
T 2b0o_E 262 ALDIARKKHHKECEELLEQAQAG------TFAFPL 290 (301)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH------TTSSCC
T ss_pred HHHHHHHcCCHHHHHHHHHhcCC------CCCChh
Confidence 99999999998654 666654 466765
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=2.3e-21 Score=126.74 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=82.3
Q ss_pred CCCCChHHHHHHH---hCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcH
Q 045439 7 DQYLWTPIYYAAY---HNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNF 82 (113)
Q Consensus 7 d~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~ 82 (113)
|..|+||||+|+. .|+.+++++|++.| ++++..+. |+||||+|+..|+.+++++|+++|++ ++.+|..|.||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g---a~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tp 243 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNG---GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETA 243 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHS---CCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcC---CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 7789999999976 89999999999999 55666666 99999999999999999999999999 89999999999
Q ss_pred HHHHHHhCChhh---HHhccCCccccccC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRHLLKY 108 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~~~~~ 108 (113)
||+|+..|+.++ ++..|++++.....
T Consensus 244 l~~A~~~~~~~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 244 LDIARKKHHKECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHTCC--------
T ss_pred HHHHHHcCCHHHHHHHHHhCCCCCCCcce
Confidence 999999999865 58889888765443
No 93
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.86 E-value=1.6e-21 Score=116.99 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=85.1
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC-
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW- 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~- 80 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |+||||+|+..++.+++++|+++|++ ++.++..|.
T Consensus 63 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~ 138 (239)
T 1ycs_B 63 PSLPNDEGITALHNAVCAGHTEIVKFLVQFG---VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQ 138 (239)
T ss_dssp CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCc
Confidence 5778899999999999999999999999999 55566665 99999999999999999999999999 777887776
Q ss_pred cHHHHH--HHhCChhh---HHhccCCcccc
Q 045439 81 NFFHYA--MTQANDHT---VNEQNVSVRHL 105 (113)
Q Consensus 81 t~l~~a--~~~~~~~~---l~~~~~~~~~~ 105 (113)
||||+| +..|+.++ ++..+.+++..
T Consensus 139 t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 139 TAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp CHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred chHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence 999999 66777754 57777776665
No 94
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=8.8e-21 Score=115.29 Aligned_cols=106 Identities=18% Similarity=0.136 Sum_probs=68.4
Q ss_pred ccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhcccccccc-------
Q 045439 4 KETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELV------- 75 (113)
Q Consensus 4 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~------- 75 (113)
+.+|..|.||||+|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|++ .+..
T Consensus 66 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~ 141 (285)
T 1wdy_A 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKG---ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQ 141 (285)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHH
Confidence 455666777777777777777777777776 33344443 67777777777777777777777666 4443
Q ss_pred ---CCCCCcHHHHHHHhCChhhH---Hhc-cCCccccccCCCCCC
Q 045439 76 ---DDRGWNFFHYAMTQANDHTV---NEQ-NVSVRHLLKYGYPTL 113 (113)
Q Consensus 76 ---~~~g~t~l~~a~~~~~~~~l---~~~-~~~~~~~~~~g~t~l 113 (113)
+..|.||||+|+..++.+++ +.. +.+++..+..|+|||
T Consensus 142 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l 186 (285)
T 1wdy_A 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186 (285)
T ss_dssp HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred HhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHH
Confidence 55566777777777666543 443 666666666666653
No 95
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.85 E-value=8.6e-21 Score=106.91 Aligned_cols=88 Identities=19% Similarity=0.193 Sum_probs=79.6
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|++. ++ ++.+|..|.|
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t 135 (156)
T 1bd8_A 61 PNVQDTSGTSPVHDAARTGFLDTLKVLVEHG---ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLT 135 (156)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCC
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCC
Confidence 5678889999999999999999999999999 45555555 99999999999999999999999 77 7889999999
Q ss_pred HHHHHHHhCChhhH
Q 045439 82 FFHYAMTQANDHTV 95 (113)
Q Consensus 82 ~l~~a~~~~~~~~l 95 (113)
|||+|+..++.+++
T Consensus 136 ~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 136 PLELALQRGAQDLV 149 (156)
T ss_dssp HHHHHHHSCCHHHH
T ss_pred HHHHHHHcCcHHHH
Confidence 99999999998765
No 96
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.85 E-value=5.7e-21 Score=120.98 Aligned_cols=107 Identities=17% Similarity=0.121 Sum_probs=92.6
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhc---cccccccCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLA---AKCYELVDDR 78 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g---~~~~~~~~~~ 78 (113)
++.+|..|+||||+|+..|+.+++++|++.|+ +++..+. |.||||+|+..++.+++++|++.+ ++ .+..+..
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~ 234 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGA---DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRN 234 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTT
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCC---CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCC
Confidence 57789999999999999999999999999994 4455555 999999999999999999999988 56 7888999
Q ss_pred CCcHHHHHHHhC---Chh---hHHhccCCccc--------cccCCCCCC
Q 045439 79 GWNFFHYAMTQA---NDH---TVNEQNVSVRH--------LLKYGYPTL 113 (113)
Q Consensus 79 g~t~l~~a~~~~---~~~---~l~~~~~~~~~--------~~~~g~t~l 113 (113)
|.||||+|+..+ +.+ .++..|++++. ++..|+|||
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~L 283 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTAL 283 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTH
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHH
Confidence 999999999987 444 45888988886 667899986
No 97
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.84 E-value=1e-20 Score=112.65 Aligned_cols=108 Identities=20% Similarity=0.160 Sum_probs=94.5
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++..|..|.++|++|+..|+.+++++|++.| .+++..+. |.||||+|+..++.+++++|++.|+......+..|.|
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAG---YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST 78 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBC
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcC---CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCC
Confidence 3567888999999999999999999999999 45555555 9999999999999999999999999855555667999
Q ss_pred HHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 82 FFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 82 ~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|||+|+..++.++ +++.|.+++.++..|.|||
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 113 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCI 113 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 9999999999865 4888999999999999985
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=1.1e-20 Score=109.22 Aligned_cols=86 Identities=23% Similarity=0.313 Sum_probs=77.3
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccC-C-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKD-Q-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++.+|..|+||||+|+..|+.+++++|++.| ++++..+ . |+||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 69 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~ 144 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAG---ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGL 144 (183)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCC
Confidence 5778999999999999999999999999999 4454444 3 99999999999999999999999999 889999999
Q ss_pred cHHHHHHHhCCh
Q 045439 81 NFFHYAMTQAND 92 (113)
Q Consensus 81 t~l~~a~~~~~~ 92 (113)
||||+|+..++.
T Consensus 145 tpl~~A~~~~~~ 156 (183)
T 3deo_A 145 TALELAREILKT 156 (183)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHhccC
Confidence 999999987554
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=5.3e-21 Score=121.08 Aligned_cols=99 Identities=17% Similarity=0.065 Sum_probs=56.2
Q ss_pred ChHHHHHHHh-CCHHHHHHHHhcCCCCCcccccC--C-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHH
Q 045439 11 WTPIYYAAYH-NQYQQIYVLLEIDPTASNIVDKD--Q-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYA 86 (113)
Q Consensus 11 ~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~~--~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 86 (113)
.|+||+|+.. ++.++++.|++.|+++ +..+ . |.||||+|+..++.+++++|+++|++ ++..|..|+||||+|
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadv---n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~A 275 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADV---NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHHA 275 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCT---TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCC---CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence 4456666655 6666666666665332 2222 2 55666666666666666666666665 555566666666666
Q ss_pred HHhCChhh---HHhccCCccccccCCCCCC
Q 045439 87 MTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 87 ~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+..++.++ ++..|++++.+|..|+|||
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL 305 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPL 305 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHH
Confidence 66665543 3555666666666666553
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=2.7e-20 Score=115.18 Aligned_cols=100 Identities=14% Similarity=0.084 Sum_probs=88.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCCCcccc------cCC-CccHHHHHHHh---CHHHHHHHHHhhccccccccCCCC
Q 045439 10 LWTPIYYAAYHNQYQQIYVLLEIDPTASNIVD------KDQ-KMTALHLAAAR---GLARANERIISLAAKCYELVDDRG 79 (113)
Q Consensus 10 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~------~~~-g~t~l~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~~g 79 (113)
..++|+.|+..++.+.++.|++.|.++ +. .+. |.||||+|+.. ++.+++++|++.|++ ++.+|..|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~---~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G 226 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF---GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADG 226 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT---TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc---cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCC
Confidence 456799999999999999999999543 33 233 99999999997 899999999999999 78899999
Q ss_pred CcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 80 WNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 80 ~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+||||+|+..|+.++ |+..|++++.+|..|+|||
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL 263 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETAL 263 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 999999999999865 5889999999999999986
No 101
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=2.1e-21 Score=107.53 Aligned_cols=89 Identities=20% Similarity=0.236 Sum_probs=79.9
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t 111 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQHK---ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLR 111 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 5678889999999999999999999999999 55555555 99999999999999999999999999 8899999999
Q ss_pred HHHHHHHhCChhhH
Q 045439 82 FFHYAMTQANDHTV 95 (113)
Q Consensus 82 ~l~~a~~~~~~~~l 95 (113)
|+++|+..+..+++
T Consensus 112 pl~~A~~~~~~~~l 125 (137)
T 3c5r_A 112 PVDYTDDESMKSLL 125 (137)
T ss_dssp GGGGCCCHHHHHHH
T ss_pred HHHHHhhccHHHHH
Confidence 99999887766665
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=2.9e-20 Score=117.72 Aligned_cols=89 Identities=24% Similarity=0.194 Sum_probs=80.2
Q ss_pred cccCC--CCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCC
Q 045439 3 IKETD--QYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRG 79 (113)
Q Consensus 3 ~~~~d--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g 79 (113)
++..| ..|+||||+|+..|+.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.+|..|
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G---advn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G 301 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNG---ANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD-LGARDSEG 301 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCC
Confidence 45556 78999999999999999999999999 55566665 99999999999999999999999999 88999999
Q ss_pred CcHHHHHHHhCChhhH
Q 045439 80 WNFFHYAMTQANDHTV 95 (113)
Q Consensus 80 ~t~l~~a~~~~~~~~l 95 (113)
.||||+|+..++.+++
T Consensus 302 ~TpL~~A~~~g~~~iv 317 (368)
T 3jue_A 302 RDPLTIAMETANADIV 317 (368)
T ss_dssp CCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHCCCHHHH
Confidence 9999999999998664
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=2.3e-20 Score=122.01 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=88.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCCCccccc------CC-CccHHHHHHH---hCHHHHHHHHHhhccccccccCCCC
Q 045439 10 LWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDK------DQ-KMTALHLAAA---RGLARANERIISLAAKCYELVDDRG 79 (113)
Q Consensus 10 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~------~~-g~t~l~~a~~---~~~~~~~~~Ll~~g~~~~~~~~~~g 79 (113)
..+.||.|+..|+.+.++.|++.|++ ++.. +. |.||||+|+. .++.+++++|+++|++ ++.+|..|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~---~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g 207 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD---FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADG 207 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC---SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc---ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCC
Confidence 34679999999999999999999954 3332 34 9999999976 8999999999999999 89999999
Q ss_pred CcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 80 WNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 80 ~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
+||||+|+..|+.++ |+..|++++.+|..|+|||
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl 244 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETAL 244 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 999999999999965 5899999999999999986
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=4.9e-20 Score=112.86 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=89.1
Q ss_pred ChHHHHHHHhCCHHHHHHHHhcCCCCCc---ccccCC-CccHHHHHHHh---CHHHHHHHHHhhccccccccCCCCCcHH
Q 045439 11 WTPIYYAAYHNQYQQIYVLLEIDPTASN---IVDKDQ-KMTALHLAAAR---GLARANERIISLAAKCYELVDDRGWNFF 83 (113)
Q Consensus 11 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~---~~~~~~-g~t~l~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~~g~t~l 83 (113)
.++|+.|+..+..+.+..+++.|.+... ++..+. |.||||+|+.. ++.+++++|+++|++ ++.+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHH
Confidence 4578999999999999999999855321 223344 99999999999 899999999999999 889999999999
Q ss_pred HHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 84 HYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 84 ~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|+|+..|+.++ ++..|++++.+|..|+|||
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 242 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPL 242 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHH
Confidence 99999999965 5899999999999999986
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=4.6e-20 Score=111.00 Aligned_cols=83 Identities=24% Similarity=0.322 Sum_probs=74.8
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccC-C-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCC
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKD-Q-KMTALHLAAARGLARANERIISLAAKCYELVDDRGW 80 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 80 (113)
++.+|..|+||||+|+..|+.+++++|++.|+ +++..+ . |.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~ 145 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGA---DLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGL 145 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC---CTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC---CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCC
Confidence 57789999999999999999999999999994 444444 3 99999999999999999999999999 888999999
Q ss_pred cHHHHHHHh
Q 045439 81 NFFHYAMTQ 89 (113)
Q Consensus 81 t~l~~a~~~ 89 (113)
||||+|+..
T Consensus 146 t~l~~A~~~ 154 (244)
T 3ui2_A 146 TALELAREI 154 (244)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 999999854
No 106
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.83 E-value=1e-20 Score=109.95 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=84.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCCCcccc-cCCCccHHHHHHHhCH----HHHHHHHHhhccccccccCCCCCcHHH
Q 045439 10 LWTPIYYAAYHNQYQQIYVLLEIDPTASNIVD-KDQKMTALHLAAARGL----ARANERIISLAAKCYELVDDRGWNFFH 84 (113)
Q Consensus 10 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~g~t~l~~a~~~~~----~~~~~~Ll~~g~~~~~~~~~~g~t~l~ 84 (113)
++++++.|+..|+.+.++.++..+. .... .. |+||||+|+..++ .+++++|++.|++ ++.+|..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~-g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY---EDKESVL-KSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHH-TTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc---ccccccC-CCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHH
Confidence 5678999999999999999998773 2222 23 9999999999885 4589999999999 8999999999999
Q ss_pred HHHHhCCh---------hhHHhccCCccccccCCC-CCC
Q 045439 85 YAMTQAND---------HTVNEQNVSVRHLLKYGY-PTL 113 (113)
Q Consensus 85 ~a~~~~~~---------~~l~~~~~~~~~~~~~g~-t~l 113 (113)
+|+..++. +.++..|++++.+|..|+ |||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpL 119 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVF 119 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTT
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHH
Confidence 99998873 346899999999999999 886
No 107
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.82 E-value=7.8e-20 Score=114.09 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=84.3
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHh-cCCCCCcccccCC-CccHHHHHHHhC----HHHHHHHHHhhccccccccCCC
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLE-IDPTASNIVDKDQ-KMTALHLAAARG----LARANERIISLAAKCYELVDDR 78 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~-g~t~l~~a~~~~----~~~~~~~Ll~~g~~~~~~~~~~ 78 (113)
..+..|.||||+|+..|+.+++++|++ .| ++++..+. |.|+++.++..+ ...++++|+++|++ ++.+|..
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g---ad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~ 238 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMG---ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGER 238 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSC---CCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGG
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccC---CCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCC
Confidence 456679999999999999999999996 47 45555555 889998877543 35577889999998 7888999
Q ss_pred CCcHHHHHHHhCChhhH---Hh-ccCCccccccCCCCCC
Q 045439 79 GWNFFHYAMTQANDHTV---NE-QNVSVRHLLKYGYPTL 113 (113)
Q Consensus 79 g~t~l~~a~~~~~~~~l---~~-~~~~~~~~~~~g~t~l 113 (113)
|+||||+|+..++.+++ +. .+++++.+|..|+|||
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTAL 277 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHH
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHH
Confidence 99999999999888653 43 4789999999999986
No 108
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.81 E-value=9.5e-20 Score=113.71 Aligned_cols=100 Identities=18% Similarity=0.105 Sum_probs=75.6
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC--CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHH
Q 045439 9 YLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ--KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYA 86 (113)
Q Consensus 9 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 86 (113)
+|.|+||.|+..|+.+++++|++.|+ +++..+. |+||||+|+..|+.+++++|+++|++ ++.++..+.++++.+
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Ga---dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGA---NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTC---CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCC---CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhHHH
Confidence 47899999999999999999999994 4444432 89999999999999999999999987 666666666666666
Q ss_pred HHhCChhh---HHhccCCccccccCCCCC
Q 045439 87 MTQANDHT---VNEQNVSVRHLLKYGYPT 112 (113)
Q Consensus 87 ~~~~~~~~---l~~~~~~~~~~~~~g~t~ 112 (113)
...+.... ++..+.+++..|..|+||
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~ 128 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTA 128 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBH
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCH
Confidence 55555532 245555666666666655
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.75 E-value=2.2e-18 Score=89.55 Aligned_cols=68 Identities=25% Similarity=0.249 Sum_probs=63.1
Q ss_pred CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 45 KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 45 g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|.||||+|+..++.+++++|++.|++ ++.+|..|+||||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l 72 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 78999999999999999999999999 88999999999999999999865 5889999999999999985
No 110
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.73 E-value=1.7e-18 Score=108.03 Aligned_cols=96 Identities=10% Similarity=-0.043 Sum_probs=79.8
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCCcccc-cCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHHhCC
Q 045439 14 IYYAAYHNQYQQIYVLLEIDPTASNIVD-KDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAMTQAN 91 (113)
Q Consensus 14 l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~ 91 (113)
.|.++..+..+++++|++.| ++++. .+. |.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g---~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQ---LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSC---CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSH
T ss_pred hHHHHHhhHHHHHHHHHhcC---CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcc
Confidence 47777778889999999999 55555 454 99999999999999999999999999 88999999999999999876
Q ss_pred ---h---hhHHhcc-CCccccccCCCCCC
Q 045439 92 ---D---HTVNEQN-VSVRHLLKYGYPTL 113 (113)
Q Consensus 92 ---~---~~l~~~~-~~~~~~~~~g~t~l 113 (113)
. ..++..+ .+++.+|..|+|||
T Consensus 177 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 205 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYPCLILEDSMNRTIL 205 (327)
T ss_dssp HHHTTCHHHHHHHHGGGGGEECTTCCCHH
T ss_pred cccHHHHHHHHHhhhccccCCCCCCCCHH
Confidence 2 3345554 78999999999986
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.73 E-value=2.3e-19 Score=113.93 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=71.2
Q ss_pred CCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhcccc--ccccCCCCCcH
Q 045439 6 TDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKC--YELVDDRGWNF 82 (113)
Q Consensus 6 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~--~~~~~~~g~t~ 82 (113)
++..++||||+|+..|+.+++++|++.|+........+. |.||||+|+..|+.+++++|+++|++. .+..+.. .||
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 345567888888888888888888888742111111222 678888888888888888888888530 0111222 788
Q ss_pred HHHHHHhCChhh---HHhccCCccc--cccCCCCCC
Q 045439 83 FHYAMTQANDHT---VNEQNVSVRH--LLKYGYPTL 113 (113)
Q Consensus 83 l~~a~~~~~~~~---l~~~~~~~~~--~~~~g~t~l 113 (113)
||+|+..|+.++ ++..|++++. .|..|+|||
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL 202 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAF 202 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHH
Confidence 888888888765 4777887776 677777664
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.70 E-value=1.4e-17 Score=89.51 Aligned_cols=77 Identities=16% Similarity=0.112 Sum_probs=67.1
Q ss_pred cccCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCCcccccCC-CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCc
Q 045439 3 IKETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTASNIVDKDQ-KMTALHLAAARGLARANERIISLAAKCYELVDDRGWN 81 (113)
Q Consensus 3 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 81 (113)
++.+|..|+||||+|+..++.+++++|++.| ++++..+. |.||||+|+..++.+++++|+++|++ ++.++..|.+
T Consensus 35 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~ 110 (115)
T 2l6b_A 35 VNARSKDGNTPLHLAAKNGHAEIVKLLLAKG---ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSH 110 (115)
T ss_dssp SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT---CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSS-HHHHSCCCC-
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCccccc
Confidence 5678889999999999999999999999999 55555555 99999999999999999999999999 7888988888
Q ss_pred HH
Q 045439 82 FF 83 (113)
Q Consensus 82 ~l 83 (113)
|-
T Consensus 111 ~~ 112 (115)
T 2l6b_A 111 HH 112 (115)
T ss_dssp --
T ss_pred cc
Confidence 74
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.67 E-value=5e-18 Score=107.83 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=72.5
Q ss_pred cCCCCCChHHHHHHHhCCHHHHHHHHhcCCCCC--cccccCCCccHHHHHHHhCHHHHHHHHHhhccccccc--cCCCCC
Q 045439 5 ETDQYLWTPIYYAAYHNQYQQIYVLLEIDPTAS--NIVDKDQKMTALHLAAARGLARANERIISLAAKCYEL--VDDRGW 80 (113)
Q Consensus 5 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~--~~~~g~ 80 (113)
..|..|.||||+|+..|+.+++++|++.|++.. +++.. +.||||+|+..|+.+++++|+++|++ .+. +|..|.
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~--~~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~ 199 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAE--NYHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENY 199 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHH--HHHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCC--CCCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCC
Confidence 345568899999999999999999999995421 22222 48999999999999999999999998 555 788899
Q ss_pred cHHHHHH-HhCChhhH
Q 045439 81 NFFHYAM-TQANDHTV 95 (113)
Q Consensus 81 t~l~~a~-~~~~~~~l 95 (113)
||||+|+ ..|+.+++
T Consensus 200 TpL~~Aa~~~G~~eiv 215 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVI 215 (376)
T ss_dssp HHHHHHHSTTCCHHHH
T ss_pred CHHHHHHHHCCCHHHH
Confidence 9999999 99998664
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.64 E-value=2.7e-16 Score=84.03 Aligned_cols=68 Identities=19% Similarity=0.145 Sum_probs=63.6
Q ss_pred CccHHHHHHHhCHHHHHHHHHhhccccccccCCCCCcHHHHHHHhCChhh---HHhccCCccccccCCCCCC
Q 045439 45 KMTALHLAAARGLARANERIISLAAKCYELVDDRGWNFFHYAMTQANDHT---VNEQNVSVRHLLKYGYPTL 113 (113)
Q Consensus 45 g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~---l~~~~~~~~~~~~~g~t~l 113 (113)
|.|+||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..++.++ ++..|++++.+|..|+|||
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 94 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAF 94 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHH
Confidence 89999999999999999999999998 78899999999999999999865 4888999999999999985
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=42.29 E-value=21 Score=14.87 Aligned_cols=17 Identities=18% Similarity=0.014 Sum_probs=12.1
Q ss_pred HHHHHHhCCHHHHHHHH
Q 045439 14 IYYAAYHNQYQQIYVLL 30 (113)
Q Consensus 14 l~~a~~~~~~~~~~~ll 30 (113)
+..||..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 46677778888777664
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.98 E-value=61 Score=21.53 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=21.6
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhc
Q 045439 9 YLWTPIYYAAYHNQYQQIYVLLEI 32 (113)
Q Consensus 9 ~g~t~l~~a~~~~~~~~~~~ll~~ 32 (113)
-|.|.+|+|++..+.+++..|+..
T Consensus 68 ~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 68 VGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCchhhhhhhhhhhhhHHHHhhhc
Confidence 589999999999999999999873
Done!