BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045444
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2
Length = 221
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/217 (90%), Positives = 204/217 (94%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
DIGRKKK K+ EG+ AAAEETKKSNHV RKLEKR++ RTLDPHIEEQFG+GRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>sp|P49199|RS8_ORYSJ 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8
PE=2 SV=2
Length = 220
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/217 (90%), Positives = 202/217 (93%), Gaps = 1/217 (0%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSSNKTVRR+RVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
DIGRKKKA + EG+ A A EE KKSNHVVRKLEKRQ+ RTLD HIEEQFG+GRL
Sbjct: 121 DIGRKKKA-PAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 179
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK
Sbjct: 180 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 216
>sp|Q9FIF3|RS82_ARATH 40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2
SV=1
Length = 210
Score = 356 bits (914), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 175/208 (84%), Positives = 182/208 (87%), Gaps = 12/208 (5%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
DIGRKKK G A EE KKSNHV RKLE RQ+ R LD H+EEQF +GRL
Sbjct: 121 DIGRKKK------------GEAVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRL 168
Query: 181 LACISSRPGQCGRADGYILEGKELEFYM 208
LACI+SRPGQCGRADGYILEGKELEFYM
Sbjct: 169 LACIASRPGQCGRADGYILEGKELEFYM 196
>sp|O81361|RS8_PRUAR 40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1
Length = 221
Score = 338 bits (866), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/213 (87%), Positives = 193/213 (90%), Gaps = 2/213 (0%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+IGRKKK K+ T E A EE KKSNHV KLEKRQ+ RTLD HIEEQFG G+L
Sbjct: 121 EIGRKKKTAAAKKDTP--EEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKL 178
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQR 213
LACISSRPGQCG+ADG ILEGKELEFYMKKLQR
Sbjct: 179 LACISSRPGQCGKADGDILEGKELEFYMKKLQR 211
>sp|Q93VG5|RS81_ARATH 40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2
SV=1
Length = 222
Score = 320 bits (820), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/210 (82%), Positives = 189/210 (90%), Gaps = 2/210 (0%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 121 DIGR--KKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAG 178
++GR K + TKK+ E E A AA EE KKSNH++RK+ RQ+ R+LD HIE+QF +G
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180
Query: 179 RLLACISSRPGQCGRADGYILEGKELEFYM 208
RLLACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYM 210
>sp|Q90YR6|RS8_ICTPU 40S ribosomal protein S8 OS=Ictalurus punctatus GN=rps8 PE=2 SV=3
Length = 208
Score = 265 bits (676), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 165/217 (76%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K KKRKYELGR P+NTKL K + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPVHKKRKYELGRPPSNTKLGP-KRIHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ ++ VD+APF+QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVILVDSAPFRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE + + + K +KR+K+ + P ++EQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEDILNKKRSKKVQK-----KFDKRRKNSKISPLLDEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACISSRPGQCGRADGY+LEGKELEFY++K++ KKGK
Sbjct: 172 LACISSRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
>sp|Q8WQI5|RS8_SPOFR 40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1
Length = 208
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 162/217 (74%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD HKRRATGGK+ RKKRKYELGR ANTKL + + +R RGGN K+RALR
Sbjct: 1 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSE TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY HY +
Sbjct: 60 LDTGNFSWGSECSTRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A + TE A A K+S +K RQ+ ++ +EEQF GRL
Sbjct: 120 PLGRKKGA----KLTE----AEDAIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 172 LACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 208
>sp|P62247|RS8_DANRE 40S ribosomal protein S8 OS=Danio rerio GN=rps8 PE=2 SV=2
Length = 208
Score = 256 bits (655), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 160/217 (73%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K KKRKYELGR ANTK+ + + IRVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRRTGGKRKPVHKKRKYELGRPAANTKIGPRR-IHTIRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ +V VD+ P++QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCVVLVDSTPYRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + +R+ K + P +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKVQKKFTLRR-----KTAKISPLLEEQFLQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACISSRPGQCGRADGY+LEGKELEFY++K++ KKGK
Sbjct: 172 LACISSRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
>sp|Q7SYU0|RS8_XENLA 40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3
Length = 208
Score = 256 bits (654), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 162/217 (74%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K + KKRKYE GR ANTK+ + + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYEPGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ I+ VD+ PF+QW+ HY +
Sbjct: 60 LDAGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + + E+R+K + P +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKTQKKY-----EERKKTAKISPLLEEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACI+SRPGQCGRADGY+LEGKELEFY++K++ KKGK
Sbjct: 172 LACIASRPGQCGRADGYVLEGKELEFYLRKIKAKKGK 208
>sp|P62243|RS8_RAT 40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2
Length = 208
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K + KKRKYELGR ANTK+ + + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + + ++R+K+ + +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKIQKKY-----DERKKNAKISSLLEEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACI+SRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 172 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|P62242|RS8_MOUSE 40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2
Length = 208
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K + KKRKYELGR ANTK+ + + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + + ++R+K+ + +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKIQKKY-----DERKKNAKISSLLEEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACI+SRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 172 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|Q4R6P8|RS8_MACFA 40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3
Length = 208
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K + KKRKYELGR ANTK+ + + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + + ++R+K+ + +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKIQKKY-----DERKKNAKISSLLEEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACI+SRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 172 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|P62241|RS8_HUMAN 40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2
Length = 208
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K + KKRKYELGR ANTK+ + + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + + ++R+K+ + +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKIQKKY-----DERKKNAKISSLLEEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACI+SRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 172 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|Q5E958|RS8_BOVIN 40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3
Length = 208
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD+ HKRR TGGK+K + KKRKYELGR ANTK+ + + +RVRGGN K+RALR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD GN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY +
Sbjct: 60 LDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRKK A K T EE E + + + ++R+K+ + +EEQF G+L
Sbjct: 120 PLGRKKGA---KLTPEEEEILNKKRSKKIQKKY-----DERKKNAKISSLLEEQFQQGKL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACI+SRPGQCGRADGY+LEGKELEFY++K++ +KGK
Sbjct: 172 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>sp|Q9P7B2|RS8B_SCHPO 40S ribosomal protein S8-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps8b PE=1 SV=1
Length = 200
Score = 249 bits (637), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 152/215 (70%), Gaps = 15/215 (6%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGI+RDS HKR ATG K+ +RKKRK+ELGRQP+NT++ K + +RVRGGN K+RALR
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY HYG+
Sbjct: 60 LDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGI 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+G K G A A T KS HV RK R D +D +E QF AGRL
Sbjct: 120 LMGSK--------------GKKATATPTPKSKHVQRKHSARLGDSKVDSALETQFAAGRL 165
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
A +SSRPGQ GR DGYILEG+EL FY++++ KK
Sbjct: 166 YAVVSSRPGQSGRCDGYILEGEELHFYLRRMAPKK 200
>sp|O76756|RS8_APIME 40S ribosomal protein S8 OS=Apis mellifera GN=RpS8 PE=2 SV=2
Length = 208
Score = 249 bits (636), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 162/217 (74%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRD HKRRATGGK+K RKKRK+ELGR ANTKL + + +R RGGN K+RALR
Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQR-IHTVRTRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV +DA PF+QWY HY +
Sbjct: 60 LDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRK+ A K T E E K+S K + RQ+ ++P +EEQF GR+
Sbjct: 120 PLGRKRGA---KLTEAEEE-----VLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRV 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LACISSRPGQCGR DGYILEGKELEFYM++++ KK K
Sbjct: 172 LACISSRPGQCGREDGYILEGKELEFYMRRIKSKKAK 208
>sp|Q54E24|RS8_DICDI 40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1
SV=1
Length = 211
Score = 248 bits (634), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 157/218 (72%), Gaps = 13/218 (5%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSN---KTVRRIRVRGGNVKWR 57
MGISRD++HK R TG +K KKRKYELGRQ A TK+ S K VR IRVRGG+ K+R
Sbjct: 1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFR 60
Query: 58 ALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQH 117
ALRLDTGN+SW +E +TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY H
Sbjct: 61 ALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETH 120
Query: 118 YGVDIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGA 177
YGV +G+KK A ++GE A + KKS ++ KL R K R LD IE Q G
Sbjct: 121 YGVVVGKKKSA------KKDGE----AEQVVKKSASLLAKLASRAKGRVLDSAIESQIGE 170
Query: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
GR A I+SRPGQ G+ DGYILE KELEFY ++LQ+KK
Sbjct: 171 GRFFARITSRPGQVGKCDGYILEAKELEFYQRRLQKKK 208
>sp|Q8MLY8|RS8_DROME 40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1
SV=1
Length = 208
Score = 247 bits (630), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 165/215 (76%), Gaps = 7/215 (3%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKRRATGGK+K+ RKKRK+ELGR ANTKL S + V ++R RGGN K RALR
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGR-VHKVRTRGGNTKLRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
L+TGN++W SE V RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY HY +
Sbjct: 60 LETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+GRK+ K +E E K+S V++K +RQK ++ +E+QF +GR+
Sbjct: 120 PLGRKRNP---KHAQKEDENDVLT---KKRSEKVMKKYLERQKYGKVEQALEDQFTSGRI 173
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
LACISSRPGQCGR+DGYILEGKELEFY+KK++ KK
Sbjct: 174 LACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>sp|O14049|RS8A_SCHPO 40S ribosomal protein S8-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps8a PE=3 SV=1
Length = 200
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 151/215 (70%), Gaps = 15/215 (6%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGI+RDS HKR ATG K+ +RKKRK+ELGRQP+NT++ K + +RVRGGN K+RALR
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY HYG+
Sbjct: 60 LDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGI 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+G K G A + KS HV RK R D +D +E QF AGRL
Sbjct: 120 LMGSK--------------GKKATSTPNPKSKHVQRKHSARLGDSKVDSALETQFAAGRL 165
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
A +SSRPGQ GR DGYILEG+EL FY++++ KK
Sbjct: 166 YAVVSSRPGQSGRCDGYILEGEELHFYLRRMAPKK 200
>sp|P48156|RS8_CAEEL 40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=3
SV=1
Length = 208
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 156/217 (71%), Gaps = 9/217 (4%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKR TG + KKRK+ELGR ANTK+ +++ VR +R RGGN K+RALR
Sbjct: 1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHR-VRLVRTRGGNEKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD+GN+SW SE TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY HY +
Sbjct: 60 LDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYAL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+ RKK A +E A K+S+H ++K +RQK +D + EQF GRL
Sbjct: 120 PLARKKNAKLSEEDN--------AILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRL 171
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
LA ISS PGQ G+A+GYILEGKEL+FY++K++ KK K
Sbjct: 172 LARISSSPGQVGQANGYILEGKELDFYLRKIRAKKAK 208
>sp|P0CX40|RS8B_YEAST 40S ribosomal protein S8-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS8B PE=1 SV=1
Length = 200
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 152/215 (70%), Gaps = 15/215 (6%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKR ATG K+ +RKKRK+ELGRQPANTK+ + K + +R RGGN K+RALR
Sbjct: 1 MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGA-KRIHSVRTRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
++TGN+SW SE +++KTRI VVY+ SNNELVRT TL K+AIVQ+DA PF+QW+ HYG
Sbjct: 60 IETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQ 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+G KKK V ++ET KS + RK R ++ +E QF AGRL
Sbjct: 120 TLG-KKKNVKEEETVA-------------KSKNAERKWAARAASAKIESSVESQFSAGRL 165
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
ACISSRPGQ GR DGYILEG+EL FY+++L KK
Sbjct: 166 YACISSRPGQSGRCDGYILEGEELAFYLRRLTAKK 200
>sp|P0CX39|RS8A_YEAST 40S ribosomal protein S8-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS8A PE=1 SV=1
Length = 200
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 152/215 (70%), Gaps = 15/215 (6%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKR ATG K+ +RKKRK+ELGRQPANTK+ + K + +R RGGN K+RALR
Sbjct: 1 MGISRDSRHKRSATGAKRAQFRKKRKFELGRQPANTKIGA-KRIHSVRTRGGNKKYRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
++TGN+SW SE +++KTRI VVY+ SNNELVRT TL K+AIVQ+DA PF+QW+ HYG
Sbjct: 60 IETGNFSWASEGISKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQ 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
+G KKK V ++ET KS + RK R ++ +E QF AGRL
Sbjct: 120 TLG-KKKNVKEEETVA-------------KSKNAERKWAARAASAKIESSVESQFSAGRL 165
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
ACISSRPGQ GR DGYILEG+EL FY+++L KK
Sbjct: 166 YACISSRPGQSGRCDGYILEGEELAFYLRRLTAKK 200
>sp|Q9ZT56|RS8_GRIJA 40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1
Length = 204
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 149/208 (71%), Gaps = 18/208 (8%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKRR TGGK KKRKYELGRQPA TK+ K VR +RVRGGN+K RALR
Sbjct: 1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGG-KLVRTVRVRGGNLKSRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
L++GN++WGSEA T K+RIL+VVYNASNNELVRT T VK I+Q+DA PF+Q+Y HYG+
Sbjct: 60 LESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGI 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDR-TLDPHIEEQFGAGR 179
DIG+KK A EE+K S K EKR + R LD I+E F +GR
Sbjct: 120 DIGKKK----------------AGDEESKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGR 163
Query: 180 LLACISSRPGQCGRADGYILEGKELEFY 207
L A I+SRPGQ GRADGY+LEGKELEFY
Sbjct: 164 LYASIASRPGQSGRADGYLLEGKELEFY 191
>sp|Q4N3P0|RS8_THEPA 40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1
Length = 188
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 150/215 (69%), Gaps = 29/215 (13%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKRR TGG+ +KKRKYELGR +NTKL S K VR++R RGGN+K+RALR
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-KLVRKVRCRGGNLKFRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD PFK W+ HYG+
Sbjct: 60 LDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGL 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
++G+ E + E AA T + +QF +GRL
Sbjct: 120 ELGK------SSEDPQASEKVAALVPRT----------------------LLDQFSSGRL 151
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
LACISSRPGQCGR DGY+LEG+EL FY +++ +KK
Sbjct: 152 LACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>sp|Q4UFS9|RS8_THEAN 40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1
Length = 184
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 148/215 (68%), Gaps = 33/215 (15%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGISRDS HKRR TGG+ +KKRKYELGR +NTKL S + VR++R RGGN+K+RALR
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGS-RLVRKVRCRGGNLKFRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LD+GN+SWGS+ VTRKTR++DVVYNAS+NELVRT+TLVK+AIV VD PFK W+ HYGV
Sbjct: 60 LDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGV 119
Query: 121 DIGRKKKAVTKKETTEEGEGAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180
++ E + E A +T + EQF +GRL
Sbjct: 120 EL----------EDPQASEKVAGLVPKT----------------------LLEQFSSGRL 147
Query: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
LACISSRPGQCGR DGY+LEG+EL FY +++ +KK
Sbjct: 148 LACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 182
>sp|P25204|RS8_LEIMA 40S ribosomal protein S8 OS=Leishmania major GN=RPS8A PE=3 SV=1
Length = 220
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 160/221 (72%), Gaps = 8/221 (3%)
Query: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
MGI R +HKR+ TGGK K RK+ K ELGR PANT+L + + V +R RGGN K RALR
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARR-VSPVRARGGNFKIRALR 59
Query: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
LDTGN++W SEA+ + R+LDVVYNA++NELVRT+TLVK+ IV VDAAPFK+WY +HYG+
Sbjct: 60 LDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGI 119
Query: 121 DIGRKKKAVTKKETTEEGEG---AAAAAEE---TKKSNHVVRKLEKRQKDRTLDPHIEEQ 174
D+ KK+ TK E +G A AAA++ K S + R+ +R+++ ++ I +Q
Sbjct: 120 DLDADKKS-TKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQ 178
Query: 175 FGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKK 215
GR+LA I+SRPGQ GRADG +LEG EL+FY+K+L++KK
Sbjct: 179 LREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>sp|Q976K3|RS8E_SULTO 30S ribosomal protein S8e OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps8e PE=3 SV=1
Length = 128
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGGKK R KRK+ELG P TKLS+ + + + R GGN+K R N
Sbjct: 10 RKITGGKKGKHRDKRKFELGSPPTETKLSTEELIEKERGMGGNIKIRVKYATFANIYDPQ 69
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
E V++K +IL V+ +N E R +VK +I+Q +
Sbjct: 70 EKVSKKAKILSVIETPANKEYARRGIIVKGSIIQTE 105
>sp|A2STM4|RS8E_METLZ 30S ribosomal protein S8e OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps8e PE=3 SV=1
Length = 125
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ATGG+ A R K+++E+GR PA+T + + + V+ IRV GGN K RALR + N S
Sbjct: 9 RKATGGRYHASRGKKRFEIGRSPADTIIGTTR-VKTIRVTGGNTKVRALRCEFANVSDKK 67
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+K +I V NA+N VR + K AI+ +
Sbjct: 68 TGKVQKVKINSVAENAANPNYVRRNLMTKGAIITTE 103
>sp|A0B8P7|RS8E_METTP 30S ribosomal protein S8e OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rps8e PE=3 SV=1
Length = 127
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGG+ R KRKYELGR+PA T L V++IR RGGN K R L+ D + S
Sbjct: 9 RKPTGGRLVPARGKRKYELGREPAET-LVGPIRVKKIRTRGGNQKLRLLKADVASVSDPV 67
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
T+ +I VV N +N VR + + A+++ +
Sbjct: 68 TGATKLVKIETVVDNPANRHYVRRNIITRGAVIRTE 103
>sp|A4YD47|RS8E_METS5 30S ribosomal protein S8e OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rps8e PE=3 SV=1
Length = 128
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGGKK R KRK+E+G QP TK+ S + RV GGN K R N S
Sbjct: 10 RKITGGKKNVSRGKRKFEIGSQPTETKVYSEDIREKARVLGGNAKVRLTYAAYANVINLS 69
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+ +K +IL+V+ +++N E R +VK +I++ +
Sbjct: 70 DGTAKKVKILEVIESSANREYARRGIIVKGSIIRTE 105
>sp|P54055|RS8E_METJA 30S ribosomal protein S8e OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps8e PE=3 SV=1
Length = 129
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 10 KRRATGGKKKAWRKKRKYELGRQPANTKLSSNKT-VRRIRVRGGNVKWRALRLDTGNYSW 68
+R+ TGG + RKKRKYE+GR+P T ++ ++++R RGGN+K + +R N
Sbjct: 9 RRKPTGGLYRPARKKRKYEMGREPIETHVAEEAFKIKKVRTRGGNLKVKVVRTGFANVLD 68
Query: 69 GSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+K +I+ V N +N VR + K AI++ +
Sbjct: 69 PETGTCKKVKIITVRENKANIHYVRRNVITKGAIIETE 106
>sp|A6UWP2|RS8E_META3 30S ribosomal protein S8e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps8e PE=3 SV=1
Length = 128
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 10 KRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWG 69
+R+ATGGK K KK K E+GR+ A T L+ + ++ +RV GGN K + LR + N
Sbjct: 9 RRKATGGKYKIVVKKHKKEMGRESAETHLTDDTKIKIVRVAGGNKKVKLLRTNYANVMDP 68
Query: 70 SEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFK 111
+K I +VV N +N +R + K AI++ + K
Sbjct: 69 KTNTCKKVSISNVVGNDANKHYIRRNIITKGAIIETEMGKAK 110
>sp|P61301|RS8E_NANEQ 30S ribosomal protein S8e OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rps8e PE=3 SV=1
Length = 127
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R TG RKKRKYELGR+P T++ K +++IRVRGGN+K R R N +
Sbjct: 11 RLITGRIHPRARKKRKYELGREPTFTRVGERK-IKKIRVRGGNIKIRLKRDMYVNVYDPT 69
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFK 111
+ T K +I+ + N SN R L K AIV+ + K
Sbjct: 70 QGKTVKAKIVRFLDNPSNRNFARMGILTKGAIVETELGKVK 110
>sp|A2BK08|RS8E_HYPBU 30S ribosomal protein S8e OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rps8e PE=3 SV=1
Length = 136
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 11 RRATGGKKKAWRK-KRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWG 69
++ TGGKK+ +K KRKY +GR P T+L + IRVRGGN K R R N
Sbjct: 10 KKPTGGKKRPHQKVKRKYWMGRYPTFTRLDNRDVRVHIRVRGGNYKIRLKRAAYANVIDP 69
Query: 70 SEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
RK RIL VV +N R +VK I++ +
Sbjct: 70 ETNTARKVRILRVVETPANPHYARANIIVKGTIIETE 106
>sp|Q4JAP5|RS8E_SULAC 30S ribosomal protein S8e OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rps8e PE=3 SV=1
Length = 128
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGG+K R KRKYELG P TK+S + RV GGN K R N
Sbjct: 10 RKITGGQKGKNRDKRKYELGSPPTETKISDKDIKEKDRVAGGNFKLRLRYASYANVYDPQ 69
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+K +I+ V+ + +N E R +VK ++Q +
Sbjct: 70 SKTAKKVKIISVLESPANREYARRGIIVKGTLIQTE 105
>sp|Q5JGF3|RS8E_PYRKO 30S ribosomal protein S8e OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps8e PE=3 SV=1
Length = 130
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRR-IRVRGGNVKWRALRLDTGNYSWG 69
++ +GG+ RKKRK ELGR+PANTK+ ++ R+ IR GGN K R + N G
Sbjct: 10 KKPSGGRIILARKKRKRELGREPANTKVGEDREKRKIIRTYGGNRKVRLVEALYANVFEG 69
Query: 70 SEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+ +K +IL+VV N +N + R + K AI++ +
Sbjct: 70 GKG--KKVKILNVVENPANRQYARRNIITKGAIIETE 104
>sp|C5A4I6|RS8E_THEGJ 30S ribosomal protein S8e OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rps8e PE=3 SV=1
Length = 130
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRR-IRVRGGNVKWRALRLDTGNYSWG 69
++ +GG+ RKKRK ELGR+PANT+++ + R+ IR GGN K R + N G
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPANTRVAEEREKRKIIRTYGGNRKVRLVEALYANVFEG 69
Query: 70 SEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+ RK +IL+VV N +N + R + K AI++ +
Sbjct: 70 GKG--RKVKILNVVENPANRQYARRNIITKGAIIETE 104
>sp|Q12UA1|RS8E_METBU 30S ribosomal protein S8e OS=Methanococcoides burtonii (strain DSM
6242) GN=rps8e PE=3 SV=1
Length = 125
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 10 KRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWG 69
+R+ TG K K+ R KRK+ELGR+PA T ++ K + + GGN K R L+ + N +
Sbjct: 8 RRKYTGAKLKSARGKRKFELGREPAATHVNDTKR-KNVPTHGGNRKVRLLQENIANVTNP 66
Query: 70 SEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDA 107
++ T + I VV NA+N VR + K +++Q A
Sbjct: 67 ADGKTIVSAIETVVDNAANAHYVRRNIITKGSVIQTAA 104
>sp|A7IAR0|RS8E_METB6 30S ribosomal protein S8e OS=Methanoregula boonei (strain 6A8)
GN=rps8e PE=3 SV=1
Length = 125
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGG+++ + KR++E+G PA+T + +++ + +R GGN K R++R N + +
Sbjct: 9 RKVTGGRRRPAQGKRRFEIGLAPADTHIGEDRS-KLVRTTGGNTKIRSMRAQFANVTNLA 67
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
T+K +I +V N +N VR L K AI++ +
Sbjct: 68 NGETKKVKIENVEENGANPNYVRRNLLTKGAIIRTE 103
>sp|A5UNB3|RS8E_METS3 30S ribosomal protein S8e OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rps8e PE=3 SV=1
Length = 125
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R +G + A R KRK ELGR PA T++ K +++IR RGGN K LRL T N +
Sbjct: 10 RLPSGARNVANRGKRKAELGRDPAETRVDE-KRLKKIRTRGGNEK---LRLATANKMNLT 65
Query: 71 EAVTRKTRILD---VVYNASNNELVRTQTLVKSAIVQ 104
+ T K++++D V+ N++N VR + K AIV+
Sbjct: 66 DPATGKSQVVDVLGVIENSANPNYVRRNIITKGAIVE 102
>sp|Q9UZL4|RS8E_PYRAB 30S ribosomal protein S8e OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rps8e PE=3 SV=1
Length = 127
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYS--W 68
R+ +GG+ RKKRK ELGR+P+NT+++ + IR GGN K +RL Y+ +
Sbjct: 10 RKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNKK---VRLTAAAYANVF 66
Query: 69 GSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
RK RI+ V+ N +N + R + K AI++ +
Sbjct: 67 DKSGKGRKVRIIRVIENPANRQFARRNIITKGAIIETE 104
>sp|A3DNX9|RS8E_STAMF 30S ribosomal protein S8e OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rps8e PE=3 SV=1
Length = 128
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 56/96 (58%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGGKK RKKRK+ELGR P T+ S + + IRVRGGN+K R R N + +
Sbjct: 10 RKPTGGKKTRHRKKRKHELGRPPTMTRFSVKEAQKIIRVRGGNLKIRLKRAVYVNVAVPN 69
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
E KTRIL+VV SN + R + K IV+ +
Sbjct: 70 EGKVTKTRILEVVETPSNPQYARGNYITKGTIVRTE 105
>sp|O26309|RS8E_METTH 30S ribosomal protein S8e OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps8e PE=1 SV=1
Length = 127
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRA---LRLDTGNYS 67
++ +GG+ K R KRKYELGR+PA TK+ ++ VR IR RGGN K R R++ +
Sbjct: 10 KKPSGGRAKMNRGKRKYELGREPAETKI-GDRRVRLIRTRGGNTKVRLASDTRINVVDPE 68
Query: 68 WGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
G + I +VV N +N VR + + A+V+ +
Sbjct: 69 TGKVEI---AEIRNVVENTANPHFVRRNIITRGAVVETN 104
>sp|Q8U1Y5|RS8E_PYRFU 30S ribosomal protein S8e OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rps8e PE=1 SV=1
Length = 127
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYS--W 68
++ +GG+ RKKRK ELGR+P+NT+++ + IR GGN R +RL Y+ +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGN---RKVRLTAAAYANVF 66
Query: 69 GSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
RK RI+ V+ N +N + R + K AI++ +
Sbjct: 67 DKSGKGRKVRIIRVIENPANRQFARRNIITKGAIIETE 104
>sp|Q6L0D3|RS8E_PICTO 30S ribosomal protein S8e OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps8e
PE=3 SV=2
Length = 125
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ +GGK + KR+YELGR+P T+L ++ +R+IR GGN K+ LR D N
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLG-DRELRKIRSYGGNSKFALLRCDYANVYNPK 68
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+ TRK +I V N+++ V+ + + ++ +
Sbjct: 69 DKTTRKVKINTVKENSADPHYVQRNIMNRGTVISTE 104
>sp|B8GJR4|RS8E_METPE 30S ribosomal protein S8e OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8e PE=3 SV=1
Length = 125
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGG+ R KR+ E+G+ PA T + ++ + +R GGNVK RALR + + S
Sbjct: 9 RKVTGGRYAPLRGKRRTEIGKAPAETHIGVDRK-KMVRTFGGNVKVRALRATFASVANRS 67
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
V ++ +I V N++N VR L K AI++ +
Sbjct: 68 TGVCKQVKIETVEENSANPNYVRRNLLTKGAIIRTE 103
>sp|O58830|RS8E_PYRHO 30S ribosomal protein S8e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps8e PE=3 SV=1
Length = 127
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYS--W 68
++ +GG+ RKKRK ELGR+P+NT+++ + IR GGN R +RL Y+ +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGN---RKVRLTAAAYANVF 66
Query: 69 GSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
RK RI+ V+ N +N + R + K AI++ +
Sbjct: 67 DKSGKGRKVRIIRVLENPANRQFARRNIITKGAIIETE 104
>sp|Q980W3|RS8E_SULSO 30S ribosomal protein S8e OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps8e PE=1 SV=1
Length = 133
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ TGG K R KRKYE+G P T LS+ + R GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDA 107
+K +IL+++ +N EL R +++ A ++ +A
Sbjct: 70 TNTAKKVKILEILETPANKELARRGIIIRGAKIRTEA 106
>sp|B6YTF2|RS8E_THEON 30S ribosomal protein S8e OS=Thermococcus onnurineus (strain NA1)
GN=rps8e PE=3 SV=1
Length = 130
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRR-IRVRGGNVKWRALRLDTGNYSWG 69
R+ +GG+ RKKRK ELGR+PA TK++ + ++ IR GGN K R + N G
Sbjct: 10 RKPSGGRIILARKKRKRELGREPAFTKVAEGREKKKIIRTYGGNRKVRLIEALYANVFDG 69
Query: 70 SEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
+ +K ++L VV N +N + VR + K AI++ +
Sbjct: 70 GKG--KKVKVLRVVENPANRQYVRRNIITKGAIIETE 104
>sp|A3CSQ2|RS8E_METMJ 30S ribosomal protein S8e OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rps8e PE=3 SV=1
Length = 125
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 11 RRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGS 70
R+ +GG+ + K++ E+GR PA T + + R +R GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERR-RIVRTFGGNQKVRALRLEYATVSNPA 67
Query: 71 EAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVD 106
T+KT+I V N+++ VR + L K AI++ +
Sbjct: 68 TGETKKTKIEAVEANSADPNYVRRKLLTKGAIIKTE 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,333,089
Number of Sequences: 539616
Number of extensions: 3148406
Number of successful extensions: 8630
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 8432
Number of HSP's gapped (non-prelim): 160
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)