Query 045446
Match_columns 263
No_of_seqs 234 out of 2160
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 13:17:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045446.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045446hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06813 Nodulin-like: Nodulin 100.0 2.5E-36 5.3E-41 247.5 26.7 247 13-259 1-250 (250)
2 PTZ00207 hypothetical protein; 100.0 4.4E-29 9.5E-34 227.4 23.6 251 9-260 22-298 (591)
3 PRK14995 methyl viologen resis 99.9 2.3E-21 5E-26 176.3 22.7 172 13-191 4-179 (495)
4 TIGR00890 2A0111 Oxalate/Forma 99.9 8.6E-21 1.9E-25 165.2 14.8 178 13-197 2-181 (377)
5 PRK09705 cynX putative cyanate 99.8 3E-19 6.5E-24 157.8 22.4 134 29-169 24-158 (393)
6 PRK03545 putative arabinose tr 99.8 1.2E-18 2.7E-23 153.6 20.6 146 30-182 25-172 (390)
7 TIGR02332 HpaX 4-hydroxyphenyl 99.8 6E-19 1.3E-23 156.9 17.3 181 11-198 4-194 (412)
8 PRK10207 dipeptide/tripeptide 99.8 9.8E-18 2.1E-22 152.0 24.2 161 28-194 28-194 (489)
9 TIGR00711 efflux_EmrB drug res 99.8 2.2E-18 4.7E-23 155.9 19.9 153 30-189 18-172 (485)
10 TIGR00891 2A0112 putative sial 99.8 1.1E-18 2.3E-23 153.8 16.7 181 9-196 6-191 (405)
11 PRK03699 putative transporter; 99.8 7.9E-18 1.7E-22 148.8 20.9 161 11-178 3-167 (394)
12 PRK11551 putative 3-hydroxyphe 99.8 2.6E-18 5.6E-23 152.1 17.7 183 8-197 8-194 (406)
13 PRK10213 nepI ribonucleoside t 99.8 9.7E-18 2.1E-22 148.3 20.8 167 9-182 14-183 (394)
14 PRK10504 putative transporter; 99.8 1.8E-17 3.9E-22 149.7 22.2 158 27-191 23-182 (471)
15 COG2814 AraJ Arabinose efflux 99.8 7.3E-17 1.6E-21 139.8 23.9 161 27-194 26-189 (394)
16 PRK09556 uhpT sugar phosphate 99.8 3.6E-18 7.8E-23 154.3 16.4 167 29-197 44-216 (467)
17 TIGR00903 2A0129 major facilit 99.8 6.7E-18 1.4E-22 148.0 16.3 160 31-198 8-170 (368)
18 TIGR00892 2A0113 monocarboxyla 99.8 9.8E-18 2.1E-22 151.0 17.6 177 11-194 15-194 (455)
19 TIGR00710 efflux_Bcr_CflA drug 99.8 9.8E-18 2.1E-22 146.9 17.0 158 32-196 23-183 (385)
20 PRK11663 regulatory protein Uh 99.8 1.9E-17 4.1E-22 148.2 17.3 162 29-197 38-202 (434)
21 PRK15403 multidrug efflux syst 99.8 3.2E-17 7E-22 145.9 18.5 189 1-196 1-194 (413)
22 PRK12307 putative sialic acid 99.8 4E-17 8.7E-22 145.4 18.9 146 30-182 34-181 (426)
23 PRK10077 xylE D-xylose transpo 99.8 3.2E-17 7E-22 148.2 17.3 168 30-197 28-218 (479)
24 PRK05122 major facilitator sup 99.8 1E-16 2.3E-21 141.6 20.2 146 35-180 36-185 (399)
25 PRK12382 putative transporter; 99.8 1.6E-16 3.4E-21 140.2 21.1 140 39-178 41-183 (392)
26 COG2271 UhpC Sugar phosphate p 99.7 1E-17 2.2E-22 144.0 11.2 161 32-199 47-212 (448)
27 PRK10091 MFS transport protein 99.7 1.6E-16 3.5E-21 139.8 19.2 145 31-182 20-166 (382)
28 TIGR00893 2A0114 d-galactonate 99.7 2.4E-17 5.3E-22 143.9 12.8 160 30-196 10-172 (399)
29 PRK10473 multidrug efflux syst 99.7 1.1E-15 2.4E-20 134.8 23.3 159 32-197 21-182 (392)
30 PRK10406 alpha-ketoglutarate t 99.7 2.3E-16 5.1E-21 141.1 19.1 156 27-187 35-212 (432)
31 PF07690 MFS_1: Major Facilita 99.7 3E-17 6.6E-22 141.7 13.0 149 33-188 15-166 (352)
32 TIGR01299 synapt_SV2 synaptic 99.7 3.5E-17 7.7E-22 153.7 13.8 181 11-198 163-359 (742)
33 PRK15075 citrate-proton sympor 99.7 2.3E-16 5E-21 141.2 17.5 176 1-181 1-199 (434)
34 TIGR00895 2A0115 benzoate tran 99.7 6.1E-17 1.3E-21 142.0 13.4 179 10-195 12-194 (398)
35 TIGR00879 SP MFS transporter, 99.7 1.4E-16 3.1E-21 142.8 16.0 161 32-196 46-219 (481)
36 PRK03633 putative MFS family t 99.7 4.5E-16 9.8E-21 136.9 18.5 134 29-169 21-156 (381)
37 PRK03893 putative sialic acid 99.7 1.9E-16 4.2E-21 143.7 16.2 168 11-185 16-186 (496)
38 TIGR00881 2A0104 phosphoglycer 99.7 7.6E-17 1.7E-21 140.4 13.0 161 29-196 10-174 (379)
39 PRK10642 proline/glycine betai 99.7 3.1E-16 6.7E-21 142.5 17.4 164 28-196 30-215 (490)
40 TIGR00894 2A0114euk Na(+)-depe 99.7 3.4E-17 7.4E-22 147.7 10.9 150 43-197 70-223 (465)
41 PRK15402 multidrug efflux syst 99.7 3.3E-16 7.2E-21 138.8 17.1 142 30-178 29-172 (406)
42 TIGR00885 fucP L-fucose:H+ sym 99.7 1.2E-15 2.7E-20 135.6 20.6 131 33-167 22-154 (410)
43 PF06609 TRI12: Fungal trichot 99.7 1.7E-15 3.7E-20 138.1 21.5 218 34-260 64-293 (599)
44 PRK11646 multidrug resistance 99.7 1E-15 2.3E-20 135.6 19.5 144 30-181 27-172 (400)
45 PRK11652 emrD multidrug resist 99.7 1.5E-15 3.2E-20 134.1 19.8 160 31-197 25-187 (394)
46 KOG1330 Sugar transporter/spin 99.7 5.9E-18 1.3E-22 146.8 4.4 166 26-198 45-214 (493)
47 PRK11273 glpT sn-glycerol-3-ph 99.7 3E-16 6.5E-21 141.2 15.4 162 32-197 47-212 (452)
48 PRK11043 putative transporter; 99.7 1.2E-15 2.6E-20 135.0 18.9 157 32-195 24-182 (401)
49 TIGR00900 2A0121 H+ Antiporter 99.7 5.6E-16 1.2E-20 134.4 16.3 159 34-194 19-179 (365)
50 PRK10133 L-fucose transporter; 99.7 3.4E-15 7.4E-20 133.8 21.6 134 30-167 42-177 (438)
51 PLN00028 nitrate transmembrane 99.7 7.2E-16 1.6E-20 139.6 17.2 128 29-164 51-180 (476)
52 TIGR00887 2A0109 phosphate:H+ 99.7 4E-16 8.7E-21 142.2 15.3 166 32-198 34-229 (502)
53 PRK15034 nitrate/nitrite trans 99.7 2.8E-15 6.2E-20 133.7 20.3 147 15-164 34-184 (462)
54 PRK11102 bicyclomycin/multidru 99.7 4.3E-15 9.3E-20 130.1 21.3 157 33-196 10-169 (377)
55 TIGR00712 glpT glycerol-3-phos 99.7 5.8E-16 1.3E-20 138.8 16.0 164 30-197 43-210 (438)
56 TIGR00886 2A0108 nitrite extru 99.7 5.5E-16 1.2E-20 135.1 15.3 133 28-167 15-150 (366)
57 PRK09874 drug efflux system pr 99.7 1.1E-15 2.4E-20 135.1 17.3 157 32-196 32-196 (408)
58 PRK10054 putative transporter; 99.7 1.9E-15 4.1E-20 133.8 18.2 146 33-186 27-174 (395)
59 TIGR00896 CynX cyanate transpo 99.7 3E-15 6.6E-20 130.3 19.2 131 31-169 17-148 (355)
60 PRK11195 lysophospholipid tran 99.7 5.7E-16 1.2E-20 137.0 14.5 151 35-196 24-176 (393)
61 TIGR00897 2A0118 polyol permea 99.7 6E-15 1.3E-19 130.8 20.5 131 36-169 35-168 (402)
62 TIGR00806 rfc RFC reduced fola 99.7 1.9E-15 4.2E-20 133.4 16.4 160 28-196 40-205 (511)
63 PRK09952 shikimate transporter 99.7 3.8E-15 8.2E-20 133.6 17.4 151 29-185 37-211 (438)
64 PRK09584 tppB putative tripept 99.7 8.1E-15 1.8E-19 133.5 19.7 156 28-189 35-196 (500)
65 TIGR00898 2A0119 cation transp 99.7 5E-16 1.1E-20 141.5 11.2 157 31-197 106-267 (505)
66 KOG2504 Monocarboxylate transp 99.7 8.3E-16 1.8E-20 139.3 12.1 176 12-195 43-222 (509)
67 TIGR00924 yjdL_sub1_fam amino 99.6 1.6E-14 3.4E-19 130.8 18.6 159 29-194 25-192 (475)
68 COG2223 NarK Nitrate/nitrite t 99.6 2.7E-14 5.9E-19 123.1 18.4 182 11-198 10-198 (417)
69 cd06174 MFS The Major Facilita 99.6 1.3E-14 2.9E-19 124.8 16.1 151 29-186 14-166 (352)
70 COG0738 FucP Fucose permease [ 99.6 5.5E-14 1.2E-18 120.6 18.9 133 32-168 31-165 (422)
71 TIGR00805 oat sodium-independe 99.6 1.5E-15 3.2E-20 141.6 9.0 137 32-168 51-233 (633)
72 PRK15462 dipeptide/tripeptide 99.6 2.9E-13 6.4E-18 122.0 23.1 159 28-192 23-187 (493)
73 PRK10489 enterobactin exporter 99.6 2.2E-14 4.8E-19 127.6 15.8 163 32-196 35-199 (417)
74 KOG2532 Permease of the major 99.6 3.2E-15 6.8E-20 134.0 10.0 154 41-199 65-222 (466)
75 TIGR00899 2A0120 sugar efflux 99.6 4.1E-14 8.9E-19 123.6 16.8 153 38-197 22-180 (375)
76 KOG3764 Vesicular amine transp 99.6 9.4E-15 2E-19 124.8 9.3 146 42-194 99-248 (464)
77 PRK10642 proline/glycine betai 99.6 2.6E-13 5.6E-18 123.4 18.9 167 29-199 265-435 (490)
78 TIGR00883 2A0106 metabolite-pr 99.5 2.1E-13 4.5E-18 119.4 14.8 160 31-195 10-192 (394)
79 PRK08633 2-acyl-glycerophospho 99.5 7.9E-13 1.7E-17 131.5 19.0 132 34-169 30-165 (1146)
80 TIGR00901 2A0125 AmpG-related 99.5 3.6E-12 7.8E-17 111.0 19.7 153 34-192 8-176 (356)
81 PRK15011 sugar efflux transpor 99.5 1.4E-12 2.9E-17 115.4 17.1 155 33-194 235-391 (393)
82 KOG0254 Predicted transporter 99.5 1.3E-12 2.7E-17 119.6 16.8 143 49-199 89-235 (513)
83 PRK11551 putative 3-hydroxyphe 99.5 1.4E-12 3.1E-17 115.4 16.7 156 31-193 237-395 (406)
84 PRK15011 sugar efflux transpor 99.5 3.8E-11 8.2E-16 106.2 23.9 157 33-197 35-198 (393)
85 PRK11128 putative 3-phenylprop 99.5 3E-11 6.6E-16 106.4 22.4 142 33-184 23-169 (382)
86 PRK11010 ampG muropeptide tran 99.5 3.9E-12 8.5E-17 115.7 17.1 161 32-197 30-198 (491)
87 PRK09528 lacY galactoside perm 99.4 2.9E-12 6.4E-17 114.2 15.5 161 33-195 30-192 (420)
88 TIGR00882 2A0105 oligosacchari 99.4 4.9E-12 1.1E-16 111.8 16.7 144 35-180 23-169 (396)
89 PRK09556 uhpT sugar phosphate 99.4 1.6E-12 3.5E-17 117.5 13.3 133 31-168 275-411 (467)
90 PRK06814 acylglycerophosphoeth 99.4 4.3E-11 9.4E-16 119.2 24.2 151 40-196 42-197 (1140)
91 TIGR00880 2_A_01_02 Multidrug 99.4 1.9E-12 4.1E-17 96.6 10.5 126 58-190 7-134 (141)
92 TIGR00889 2A0110 nucleoside tr 99.4 6.8E-12 1.5E-16 111.9 15.7 159 35-196 229-405 (418)
93 TIGR00902 2A0127 phenyl propri 99.4 2.1E-11 4.5E-16 107.4 18.3 135 34-178 24-163 (382)
94 TIGR00890 2A0111 Oxalate/Forma 99.4 6.5E-12 1.4E-16 109.2 14.4 139 36-179 227-367 (377)
95 PRK11902 ampG muropeptide tran 99.4 1.8E-11 3.9E-16 108.6 17.2 157 35-196 20-184 (402)
96 PRK03893 putative sialic acid 99.4 2.1E-11 4.5E-16 110.8 17.9 142 33-179 294-439 (496)
97 PRK09952 shikimate transporter 99.4 3E-11 6.6E-16 108.4 18.6 163 30-195 266-434 (438)
98 TIGR00897 2A0118 polyol permea 99.4 2.6E-11 5.6E-16 107.5 18.0 162 29-194 237-401 (402)
99 KOG0255 Synaptic vesicle trans 99.4 2.4E-12 5.3E-17 117.9 11.5 147 42-198 111-259 (521)
100 KOG0252 Inorganic phosphate tr 99.4 1.6E-12 3.5E-17 113.1 9.4 181 18-198 45-250 (538)
101 TIGR00899 2A0120 sugar efflux 99.4 1.4E-11 3.1E-16 107.5 15.5 150 37-193 222-373 (375)
102 PRK09528 lacY galactoside perm 99.4 8.5E-12 1.8E-16 111.2 14.0 147 44-197 257-407 (420)
103 TIGR01299 synapt_SV2 synaptic 99.4 1.2E-11 2.5E-16 116.8 15.3 132 55-194 601-734 (742)
104 PRK10489 enterobactin exporter 99.4 3E-11 6.5E-16 107.5 17.0 156 33-195 242-401 (417)
105 cd06174 MFS The Major Facilita 99.4 2.2E-11 4.7E-16 104.7 15.1 152 31-189 192-347 (352)
106 PRK03545 putative arabinose tr 99.4 4E-11 8.6E-16 105.8 16.7 150 38-194 230-380 (390)
107 TIGR00879 SP MFS transporter, 99.4 2.9E-11 6.2E-16 108.4 15.8 139 31-169 301-445 (481)
108 PRK10406 alpha-ketoglutarate t 99.4 6.6E-11 1.4E-15 106.0 18.0 163 30-195 259-425 (432)
109 PRK03699 putative transporter; 99.3 2.7E-11 5.8E-16 107.1 15.0 146 30-182 221-369 (394)
110 KOG0569 Permease of the major 99.3 9.7E-11 2.1E-15 104.7 18.4 157 39-199 44-210 (485)
111 PRK05122 major facilitator sup 99.3 2.2E-11 4.7E-16 107.7 14.2 155 35-198 237-393 (399)
112 PRK10504 putative transporter; 99.3 5.4E-11 1.2E-15 107.5 16.7 133 33-169 280-415 (471)
113 TIGR00883 2A0106 metabolite-pr 99.3 2.2E-11 4.7E-16 106.6 13.6 137 30-169 235-375 (394)
114 PRK15402 multidrug efflux syst 99.3 1.7E-10 3.6E-15 102.3 19.1 153 32-186 233-387 (406)
115 PRK12307 putative sialic acid 99.3 5.1E-11 1.1E-15 106.1 15.8 134 29-169 246-383 (426)
116 TIGR00902 2A0127 phenyl propri 99.3 8.9E-11 1.9E-15 103.4 16.3 143 30-180 221-366 (382)
117 PRK10077 xylE D-xylose transpo 99.3 5.6E-11 1.2E-15 107.5 15.3 131 34-167 291-424 (479)
118 COG2807 CynX Cyanate permease 99.3 3E-09 6.5E-14 90.6 24.4 148 30-185 28-178 (395)
119 PRK09705 cynX putative cyanate 99.3 1.3E-10 2.7E-15 102.9 16.7 155 31-193 222-380 (393)
120 COG2814 AraJ Arabinose efflux 99.3 3.5E-10 7.5E-15 98.5 18.4 160 27-193 225-385 (394)
121 PRK09874 drug efflux system pr 99.3 9.1E-11 2E-15 103.8 15.2 132 53-191 262-395 (408)
122 PF05977 MFS_3: Transmembrane 99.3 6.8E-10 1.5E-14 101.3 20.8 159 35-195 31-191 (524)
123 KOG2615 Permease of the major 99.3 1.9E-11 4.1E-16 104.3 9.6 112 49-168 68-181 (451)
124 PRK11010 ampG muropeptide tran 99.3 3.5E-10 7.6E-15 103.0 18.2 157 37-196 246-405 (491)
125 PRK15075 citrate-proton sympor 99.3 2.7E-10 5.8E-15 102.1 17.0 137 30-169 254-394 (434)
126 COG3104 PTR2 Dipeptide/tripept 99.3 1.7E-09 3.7E-14 95.7 21.3 148 44-196 56-208 (498)
127 KOG2533 Permease of the major 99.3 4.3E-11 9.2E-16 108.0 11.4 152 40-198 72-232 (495)
128 COG2223 NarK Nitrate/nitrite t 99.3 5.8E-11 1.3E-15 102.7 11.6 172 22-193 226-400 (417)
129 PF00083 Sugar_tr: Sugar (and 99.3 9.2E-14 2E-18 124.8 -6.0 145 49-198 46-196 (451)
130 TIGR00892 2A0113 monocarboxyla 99.3 2E-10 4.4E-15 103.6 15.4 134 31-169 258-395 (455)
131 PRK03633 putative MFS family t 99.2 4.1E-10 8.8E-15 99.1 16.3 143 35-187 221-365 (381)
132 TIGR00711 efflux_EmrB drug res 99.2 1.1E-10 2.4E-15 105.7 12.8 134 33-169 274-410 (485)
133 TIGR00710 efflux_Bcr_CflA drug 99.2 9.9E-10 2.1E-14 96.2 18.2 133 32-166 224-358 (385)
134 TIGR00893 2A0114 d-galactonate 99.2 3.6E-10 7.8E-15 98.6 15.2 153 31-186 232-391 (399)
135 PRK14995 methyl viologen resis 99.2 1.6E-10 3.4E-15 105.4 12.8 134 32-169 277-413 (495)
136 PRK11043 putative transporter; 99.2 1.8E-09 3.9E-14 95.6 19.0 136 32-169 221-357 (401)
137 PRK11273 glpT sn-glycerol-3-ph 99.2 2.3E-10 5.1E-15 103.0 13.5 157 30-191 269-432 (452)
138 PRK12382 putative transporter; 99.2 3.4E-10 7.3E-15 99.9 13.8 148 34-190 236-385 (392)
139 TIGR00887 2A0109 phosphate:H+ 99.2 3.9E-10 8.5E-15 102.9 14.4 138 29-169 303-454 (502)
140 TIGR00889 2A0110 nucleoside tr 99.2 9.5E-10 2.1E-14 98.1 16.2 149 33-197 22-183 (418)
141 TIGR00900 2A0121 H+ Antiporter 99.2 2.4E-10 5.3E-15 99.0 12.1 128 35-168 232-362 (365)
142 PRK15034 nitrate/nitrite trans 99.2 5.1E-10 1.1E-14 100.2 14.3 142 26-169 264-428 (462)
143 TIGR00891 2A0112 putative sial 99.2 4.7E-10 1E-14 98.7 13.6 128 36-169 260-390 (405)
144 TIGR00792 gph sugar (Glycoside 99.2 6.4E-10 1.4E-14 99.4 13.5 160 37-197 23-198 (437)
145 PRK10091 MFS transport protein 99.1 2.5E-09 5.5E-14 94.1 16.8 136 37-178 223-360 (382)
146 PRK11128 putative 3-phenylprop 99.1 2.6E-09 5.7E-14 94.0 16.7 130 34-170 225-356 (382)
147 KOG2563 Permease of the major 99.1 1.6E-08 3.5E-13 88.4 20.7 160 8-169 38-202 (480)
148 PF11700 ATG22: Vacuole efflux 99.1 1.5E-09 3.2E-14 98.1 14.9 165 28-195 296-469 (477)
149 PRK11663 regulatory protein Uh 99.1 1.9E-09 4.2E-14 96.6 15.0 145 32-181 261-412 (434)
150 TIGR00895 2A0115 benzoate tran 99.1 7.5E-10 1.6E-14 97.1 12.1 129 31-166 267-397 (398)
151 PRK11102 bicyclomycin/multidru 99.1 1E-08 2.2E-13 89.7 19.1 126 36-164 216-344 (377)
152 PRK10213 nepI ribonucleoside t 99.1 6.2E-09 1.4E-13 92.2 17.2 126 37-169 240-366 (394)
153 PLN00028 nitrate transmembrane 99.1 2.2E-09 4.8E-14 97.4 14.6 157 33-195 271-434 (476)
154 TIGR01301 GPH_sucrose GPH fami 99.1 3.4E-09 7.5E-14 95.4 15.1 131 36-166 26-175 (477)
155 TIGR02718 sider_RhtX_FptX side 99.1 7.6E-09 1.6E-13 91.3 17.1 143 36-179 230-376 (390)
156 PRK11902 ampG muropeptide tran 99.1 1.1E-08 2.3E-13 90.8 18.0 151 37-193 233-389 (402)
157 TIGR00712 glpT glycerol-3-phos 99.1 3.6E-09 7.9E-14 94.9 14.2 137 31-169 268-408 (438)
158 COG2270 Permeases of the major 99.0 3.3E-09 7.2E-14 92.0 12.6 167 22-196 261-431 (438)
159 PRK10054 putative transporter; 99.0 1.2E-08 2.7E-13 90.3 16.7 121 43-170 238-360 (395)
160 TIGR00898 2A0119 cation transp 99.0 4.9E-09 1.1E-13 95.6 13.6 130 59-195 365-496 (505)
161 PF05977 MFS_3: Transmembrane 99.0 2.3E-08 4.9E-13 91.4 17.5 149 36-191 240-391 (524)
162 KOG0253 Synaptic vesicle trans 99.0 9E-09 2E-13 87.9 13.2 160 31-199 95-256 (528)
163 KOG0569 Permease of the major 99.0 4.8E-08 1E-12 87.6 18.6 168 30-197 286-458 (485)
164 TIGR00882 2A0105 oligosacchari 99.0 1.6E-08 3.6E-13 89.4 15.1 139 45-190 250-392 (396)
165 PRK10133 L-fucose transporter; 99.0 2.2E-08 4.8E-13 90.0 16.0 120 41-169 287-407 (438)
166 TIGR00901 2A0125 AmpG-related 99.0 1.1E-08 2.5E-13 88.9 13.7 122 32-153 227-355 (356)
167 TIGR00788 fbt folate/biopterin 99.0 4.6E-08 9.9E-13 88.6 17.6 156 34-196 46-211 (468)
168 TIGR00894 2A0114euk Na(+)-depe 99.0 1.4E-08 3.1E-13 91.6 14.0 158 30-191 277-447 (465)
169 TIGR01272 gluP glucose/galacto 98.9 3.4E-08 7.4E-13 84.7 14.9 129 32-169 158-290 (310)
170 TIGR00896 CynX cyanate transpo 98.9 1.5E-08 3.3E-13 88.1 12.3 132 30-169 213-348 (355)
171 PRK11195 lysophospholipid tran 98.9 4.9E-08 1.1E-12 86.4 15.5 124 39-170 231-357 (393)
172 PRK11652 emrD multidrug resist 98.9 1.6E-07 3.5E-12 82.9 18.7 127 39-169 233-360 (394)
173 PRK10473 multidrug efflux syst 98.9 3.2E-07 6.9E-12 80.9 20.1 61 36-96 225-287 (392)
174 TIGR00792 gph sugar (Glycoside 98.9 1.1E-08 2.4E-13 91.4 10.8 116 47-168 255-379 (437)
175 PRK11646 multidrug resistance 98.9 1.9E-08 4.2E-13 89.2 12.1 128 35-169 229-359 (400)
176 TIGR02332 HpaX 4-hydroxyphenyl 98.9 1.4E-08 3E-13 90.5 11.0 142 28-176 256-403 (412)
177 PRK08633 2-acyl-glycerophospho 98.9 3.9E-08 8.5E-13 98.2 15.4 123 38-167 257-382 (1146)
178 TIGR02718 sider_RhtX_FptX side 98.9 2.8E-07 6.1E-12 81.3 19.2 167 26-195 12-185 (390)
179 PRK09669 putative symporter Ya 98.9 1.2E-07 2.7E-12 85.2 16.6 124 38-162 34-165 (444)
180 PF03825 Nuc_H_symport: Nucleo 98.9 1.7E-07 3.7E-12 83.1 16.8 130 35-169 228-364 (400)
181 PF05631 DUF791: Protein of un 98.8 2.6E-07 5.6E-12 79.2 16.6 144 39-190 59-212 (354)
182 TIGR00881 2A0104 phosphoglycer 98.8 2.6E-08 5.6E-13 86.6 10.8 133 32-169 234-372 (379)
183 KOG4686 Predicted sugar transp 98.8 2.2E-07 4.9E-12 76.9 15.1 123 38-169 288-414 (459)
184 KOG2325 Predicted transporter/ 98.8 5.8E-07 1.3E-11 80.4 18.5 157 8-166 27-188 (488)
185 PRK06814 acylglycerophosphoeth 98.8 1.1E-07 2.3E-12 95.1 15.2 134 35-168 246-395 (1140)
186 PF01306 LacY_symp: LacY proto 98.8 6E-08 1.3E-12 85.4 11.3 143 49-198 259-405 (412)
187 PRK09848 glucuronide transport 98.8 7.9E-08 1.7E-12 86.5 12.0 122 41-167 256-386 (448)
188 TIGR00903 2A0129 major facilit 98.8 4.9E-07 1.1E-11 79.4 16.7 144 28-182 206-354 (368)
189 PRK15403 multidrug efflux syst 98.8 6E-07 1.3E-11 80.0 17.5 144 30-175 234-379 (413)
190 PF07690 MFS_1: Major Facilita 98.8 1.1E-08 2.5E-13 88.1 6.2 125 32-160 224-352 (352)
191 TIGR00886 2A0108 nitrite extru 98.8 3.5E-08 7.5E-13 85.9 9.0 122 31-155 242-365 (366)
192 PF13347 MFS_2: MFS/sugar tran 98.7 3.6E-07 7.8E-12 81.8 13.4 131 37-167 25-164 (428)
193 COG2271 UhpC Sugar phosphate p 98.7 4.1E-07 8.8E-12 79.2 12.8 162 28-194 266-435 (448)
194 PRK10429 melibiose:sodium symp 98.7 5.3E-07 1.2E-11 81.8 14.3 126 38-164 31-164 (473)
195 PRK09848 glucuronide transport 98.7 1.3E-06 2.8E-11 78.6 16.4 114 37-150 32-153 (448)
196 KOG2504 Monocarboxylate transp 98.6 2.8E-07 6E-12 84.0 11.4 147 31-182 315-465 (509)
197 PRK10207 dipeptide/tripeptide 98.6 4.1E-07 8.9E-12 82.9 12.1 114 53-166 313-438 (489)
198 PF03209 PUCC: PUCC protein; 98.6 1.2E-05 2.5E-10 70.3 20.0 139 40-178 6-161 (403)
199 PF13347 MFS_2: MFS/sugar tran 98.6 7.3E-07 1.6E-11 79.8 12.8 125 37-167 248-382 (428)
200 COG2807 CynX Cyanate permease 98.6 3.2E-06 6.9E-11 72.4 14.7 149 22-178 216-369 (395)
201 PF01306 LacY_symp: LacY proto 98.6 4.2E-07 9.1E-12 80.1 9.7 152 36-194 30-188 (412)
202 PRK09584 tppB putative tripept 98.5 2.5E-06 5.4E-11 78.0 14.8 99 67-165 339-440 (500)
203 KOG0254 Predicted transporter 98.5 7.3E-06 1.6E-10 75.2 16.9 136 33-169 314-457 (513)
204 PF06609 TRI12: Fungal trichot 98.5 1.5E-06 3.2E-11 80.1 11.4 135 30-169 326-467 (599)
205 TIGR00788 fbt folate/biopterin 98.5 1.9E-06 4.1E-11 78.2 12.1 127 42-168 281-412 (468)
206 PRK11462 putative transporter; 98.5 1.5E-05 3.3E-10 72.1 17.5 130 34-164 29-167 (460)
207 PRK09669 putative symporter Ya 98.4 7.7E-06 1.7E-10 73.6 14.6 111 53-168 268-387 (444)
208 PF03825 Nuc_H_symport: Nucleo 98.4 2.3E-05 5.1E-10 69.6 17.3 97 35-138 23-121 (400)
209 KOG4686 Predicted sugar transp 98.4 2.9E-07 6.4E-12 76.3 4.8 152 10-167 39-196 (459)
210 PRK10429 melibiose:sodium symp 98.4 4.6E-06 1E-10 75.7 12.6 120 47-168 264-392 (473)
211 KOG0253 Synaptic vesicle trans 98.4 8.2E-07 1.8E-11 76.2 7.1 121 65-195 398-520 (528)
212 COG0477 ProP Permeases of the 98.4 1.1E-05 2.5E-10 66.9 14.2 130 34-168 22-157 (338)
213 PF03137 OATP: Organic Anion T 98.4 7.3E-08 1.6E-12 88.5 -0.1 135 33-167 22-201 (539)
214 TIGR00924 yjdL_sub1_fam amino 98.4 1.4E-05 3E-10 72.7 14.5 141 51-191 314-466 (475)
215 TIGR01272 gluP glucose/galacto 98.3 1.1E-05 2.4E-10 69.2 12.5 62 107-168 9-71 (310)
216 PF03092 BT1: BT1 family; Int 98.3 1.3E-05 2.9E-10 71.9 13.4 157 35-194 11-176 (433)
217 TIGR00885 fucP L-fucose:H+ sym 98.3 2.9E-05 6.4E-10 69.2 15.2 126 35-169 253-381 (410)
218 TIGR00926 2A1704 Peptide:H+ sy 98.2 0.00011 2.4E-09 69.1 16.6 133 35-167 9-148 (654)
219 PF00083 Sugar_tr: Sugar (and 98.2 1.2E-08 2.6E-13 91.6 -9.5 162 33-197 272-440 (451)
220 KOG2532 Permease of the major 98.1 4.2E-05 9.2E-10 69.1 12.8 155 30-190 274-443 (466)
221 KOG2533 Permease of the major 98.0 5.9E-05 1.3E-09 68.5 10.3 141 22-169 281-430 (495)
222 PF03209 PUCC: PUCC protein; 97.9 0.00052 1.1E-08 60.1 14.8 124 41-168 236-362 (403)
223 KOG0252 Inorganic phosphate tr 97.9 3.5E-05 7.5E-10 68.1 7.2 163 27-197 317-501 (538)
224 COG0738 FucP Fucose permease [ 97.9 0.00042 9.1E-09 60.5 13.5 135 26-169 248-384 (422)
225 COG2211 MelB Na+/melibiose sym 97.9 0.00023 5E-09 63.8 12.1 119 44-167 267-394 (467)
226 PF06779 DUF1228: Protein of u 97.9 8.5E-05 1.8E-09 50.5 6.9 64 30-93 8-72 (85)
227 TIGR00769 AAA ADP/ATP carrier 97.8 0.0051 1.1E-07 55.7 20.3 130 38-167 27-189 (472)
228 PF12832 MFS_1_like: MFS_1 lik 97.8 6.7E-05 1.4E-09 50.3 6.3 55 33-87 19-74 (77)
229 PF11700 ATG22: Vacuole efflux 97.8 0.015 3.3E-07 53.0 23.0 131 63-198 85-252 (477)
230 KOG2816 Predicted transporter 97.8 0.00033 7.3E-09 63.2 12.2 124 60-195 73-201 (463)
231 PRK11462 putative transporter; 97.7 0.0011 2.3E-08 60.2 14.0 113 50-167 264-385 (460)
232 COG2211 MelB Na+/melibiose sym 97.7 0.001 2.3E-08 59.6 13.3 131 35-166 33-172 (467)
233 PF05978 UNC-93: Ion channel r 97.7 0.00078 1.7E-08 51.6 10.8 104 55-166 44-148 (156)
234 KOG3626 Organic anion transpor 97.6 0.00024 5.2E-09 66.7 8.7 165 33-197 116-347 (735)
235 KOG3762 Predicted transporter 97.6 0.00017 3.8E-09 64.9 7.3 126 41-173 398-526 (618)
236 KOG3764 Vesicular amine transp 97.6 0.00016 3.5E-09 62.9 6.8 136 40-182 297-443 (464)
237 PF01770 Folate_carrier: Reduc 97.5 0.01 2.3E-07 52.5 17.1 154 35-196 25-184 (412)
238 TIGR01301 GPH_sucrose GPH fami 97.5 0.012 2.5E-07 53.6 17.7 132 65-197 322-474 (477)
239 PRK15462 dipeptide/tripeptide 97.5 0.0025 5.4E-08 58.1 13.1 116 51-166 310-437 (493)
240 COG2270 Permeases of the major 97.1 0.16 3.4E-06 45.1 19.2 132 62-197 72-224 (438)
241 KOG0255 Synaptic vesicle trans 97.1 0.0078 1.7E-07 55.3 11.6 128 65-198 367-497 (521)
242 KOG4332 Predicted sugar transp 97.0 0.0026 5.6E-08 52.9 7.2 121 41-169 64-193 (454)
243 KOG2816 Predicted transporter 97.0 0.014 3E-07 52.8 12.6 120 40-167 268-390 (463)
244 KOG3098 Uncharacterized conser 97.0 0.016 3.5E-07 52.2 12.2 108 54-161 284-406 (461)
245 PRK03612 spermidine synthase; 96.9 0.094 2E-06 48.4 16.6 152 38-191 39-195 (521)
246 KOG2615 Permease of the major 96.7 0.012 2.5E-07 51.4 8.7 125 38-169 285-414 (451)
247 KOG2563 Permease of the major 96.5 0.0099 2.1E-07 52.8 7.0 163 30-195 282-451 (480)
248 COG3104 PTR2 Dipeptide/tripept 96.5 0.061 1.3E-06 48.5 12.0 132 30-164 304-451 (498)
249 PF00854 PTR2: POT family; In 96.2 0.043 9.3E-07 48.2 9.8 116 79-194 2-123 (372)
250 PF02487 CLN3: CLN3 protein; 95.9 0.32 7E-06 43.1 13.7 118 59-187 69-189 (402)
251 PF06963 FPN1: Ferroportin1 (F 95.7 0.27 5.8E-06 44.2 12.7 127 33-159 277-408 (432)
252 PTZ00207 hypothetical protein; 95.2 0.33 7.2E-06 45.4 11.7 125 37-168 376-513 (591)
253 KOG3098 Uncharacterized conser 94.6 0.15 3.2E-06 46.1 7.4 102 55-164 57-159 (461)
254 TIGR00805 oat sodium-independe 94.5 0.15 3.2E-06 48.3 7.6 66 28-93 344-414 (633)
255 PF03092 BT1: BT1 family; Int 94.4 0.51 1.1E-05 42.5 10.5 123 44-168 250-379 (433)
256 KOG1237 H+/oligopeptide sympor 93.6 6.3 0.00014 36.9 16.6 163 10-172 32-223 (571)
257 KOG3762 Predicted transporter 93.2 0.17 3.8E-06 46.2 5.2 57 35-91 32-89 (618)
258 KOG1330 Sugar transporter/spin 91.6 0.56 1.2E-05 42.2 6.4 137 30-168 264-411 (493)
259 PF03219 TLC: TLC ATP/ADP tran 91.3 12 0.00025 34.5 16.9 131 38-168 44-205 (491)
260 PF02487 CLN3: CLN3 protein; 90.0 2.1 4.5E-05 38.1 8.4 113 47-164 279-392 (402)
261 KOG3574 Acetyl-CoA transporter 89.8 14 0.0003 32.9 13.4 59 24-83 40-103 (510)
262 PF03137 OATP: Organic Anion T 89.1 0.12 2.5E-06 48.0 0.0 140 30-169 321-514 (539)
263 KOG0637 Sucrose transporter an 88.0 0.92 2E-05 40.8 4.8 131 35-165 53-201 (498)
264 KOG1479 Nucleoside transporter 87.7 20 0.00043 32.0 13.8 87 102-191 111-201 (406)
265 KOG2325 Predicted transporter/ 81.8 3.2 6.9E-05 37.9 5.4 55 115-169 395-450 (488)
266 TIGR00939 2a57 Equilibrative N 80.6 25 0.00054 31.8 10.7 51 107-161 105-155 (437)
267 PF11299 DUF3100: Protein of u 78.4 1.3 2.9E-05 35.8 1.7 92 68-163 127-226 (241)
268 TIGR00806 rfc RFC reduced fola 75.0 37 0.00079 31.3 10.0 94 54-152 303-398 (511)
269 PF06963 FPN1: Ferroportin1 (F 74.7 66 0.0014 29.1 15.0 36 51-86 40-76 (432)
270 COG3202 ATP/ADP translocase [E 70.3 90 0.0019 28.8 18.5 132 38-169 47-210 (509)
271 KOG0637 Sucrose transporter an 68.9 4.9 0.00011 36.4 3.0 32 62-93 346-377 (498)
272 PF11947 DUF3464: Protein of u 65.3 24 0.00052 26.9 5.7 85 68-155 54-142 (153)
273 KOG3880 Predicted small molecu 65.1 69 0.0015 27.9 8.9 120 65-195 79-201 (409)
274 KOG3626 Organic anion transpor 60.5 35 0.00076 33.0 7.1 58 29-86 407-469 (735)
275 COG5336 Uncharacterized protei 50.5 35 0.00075 24.3 4.0 20 61-80 55-75 (116)
276 TIGR00880 2_A_01_02 Multidrug 50.2 85 0.0018 21.9 7.5 35 54-88 92-127 (141)
277 KOG4830 Predicted sugar transp 41.6 13 0.00029 31.2 1.1 51 31-81 34-94 (412)
278 PF01770 Folate_carrier: Reduc 34.4 3.5E+02 0.0076 24.4 11.3 93 53-150 289-383 (412)
279 COG1575 MenA 1,4-dihydroxy-2-n 32.2 3.3E+02 0.0071 23.4 16.5 48 134-184 139-187 (303)
280 PF03547 Mem_trans: Membrane t 31.8 3.5E+02 0.0075 23.6 11.5 17 153-169 104-120 (385)
281 TIGR00926 2A1704 Peptide:H+ sy 31.6 2.1E+02 0.0046 27.5 7.5 77 115-191 572-649 (654)
282 TIGR00939 2a57 Equilibrative N 31.2 2.1E+02 0.0046 25.9 7.2 54 109-162 373-427 (437)
283 COG2119 Predicted membrane pro 31.0 2.7E+02 0.0058 22.0 7.5 28 65-92 151-178 (190)
284 PRK10692 hypothetical protein; 28.5 1.9E+02 0.0042 19.6 4.8 17 77-93 3-19 (92)
285 PRK13499 rhamnose-proton sympo 28.3 4.1E+02 0.0089 23.3 9.0 17 174-190 135-151 (345)
286 PF06800 Sugar_transport: Suga 25.7 4.1E+02 0.0088 22.4 14.0 12 229-240 153-164 (269)
287 PF10762 DUF2583: Protein of u 25.7 1.9E+02 0.0042 19.5 4.3 17 77-93 3-19 (89)
288 PF06570 DUF1129: Protein of u 22.3 4E+02 0.0088 21.1 9.4 9 254-262 192-200 (206)
289 PF10777 YlaC: Inner membrane 21.8 2.8E+02 0.006 21.1 5.0 31 230-260 53-83 (155)
290 PF06645 SPC12: Microsomal sig 21.8 1.5E+02 0.0032 19.6 3.3 11 158-168 22-32 (76)
291 PF11283 DUF3084: Protein of u 21.7 1.2E+02 0.0025 20.3 2.7 28 57-84 9-36 (79)
292 PF06027 DUF914: Eukaryotic pr 21.5 1.4E+02 0.0031 25.9 4.1 19 173-191 286-304 (334)
293 PF00854 PTR2: POT family; In 21.3 3.1E+02 0.0068 23.8 6.3 61 35-95 53-119 (372)
294 KOG3097 Predicted membrane pro 21.0 4.3E+02 0.0094 23.3 6.7 86 39-133 50-135 (390)
295 KOG3880 Predicted small molecu 20.0 6.1E+02 0.013 22.3 7.7 108 50-162 289-397 (409)
No 1
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=2.5e-36 Score=247.49 Aligned_cols=247 Identities=50% Similarity=0.930 Sum_probs=227.4
Q ss_pred hHHHHHHHHHHHHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHHHHHH
Q 045446 13 KWLGFVTAIWVQATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEGLIGY 92 (263)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~ 92 (263)
||..++++.+++.++|..|.|+.|+|++|+++|+||+|.+.++++.++|..++++.|.+.||+|+|.++.+|.+...+|+
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChh
Q 045446 93 GVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPS 172 (263)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 172 (263)
..+|++..+..++.++|.++++.++.|.+.+..++++.....++||++||++.|+.+++.|+++++..++...+.+++..
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999999987667889999999999999999999999999999999999999999999999999999999999999889
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCccccchHHHHHHHHHHHHHHHHHHHHhhcccccch---HHHHHHHHH
Q 045446 173 AFLLILAIVPAVICLTAVLFLHENQPASGPVEDRQETEFFHIFNVLAIAVAVYLLVFDITGNHGHVLS---LYFAVGLIF 249 (263)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 249 (263)
.+.+++++.+.+++++...++|+.|++++.+.+++|+++|...+.+++.++.|++..++.+++.+.++ .....++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998776444444577788899999999999999999999999998888 556677778
Q ss_pred HHHHhhhhhc
Q 045446 250 LLALPLAVPL 259 (263)
Q Consensus 250 l~~~~~~~~~ 259 (263)
++++|+.+++
T Consensus 241 lL~~Pl~i~~ 250 (250)
T PF06813_consen 241 LLLLPLAIPV 250 (250)
T ss_pred HHHhhhhccC
Confidence 8888998864
No 2
>PTZ00207 hypothetical protein; Provisional
Probab=99.97 E-value=4.4e-29 Score=227.36 Aligned_cols=251 Identities=23% Similarity=0.265 Sum_probs=204.4
Q ss_pred CCchhHHHHHHHHHHHHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHH
Q 045446 9 LPAAKWLGFVTAIWVQATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
...+||..++++.+.+.+.+..|.++++.|.+++++|+|++|.+++..........+++.|+++||+|||+++.+|.+.+
T Consensus 22 ~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999977664444445778999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
.+|+++.++...+... .+++.++++|+++|+|.+..++.+..++.+|||++||+++|+.+.+.++|+++.+++...+..
T Consensus 102 ~iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999977765443321 367999999999999999999999999999999999999999999999999998888888777
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhhcccCCCCCC----CCCCcccc-----------------chHHHHHHHHHHHHHHHH
Q 045446 169 SKPSAFLLILAIVPAVICLTAVLFLHENQPASG----PVEDRQET-----------------EFFHIFNVLAIAVAVYLL 227 (263)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 227 (263)
++++.+++++++...+++++...+++++|.+.. .+.+++|+ ++|...+.+++.++.|++
T Consensus 181 ~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~ 260 (591)
T PTZ00207 181 DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLP 260 (591)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHH
Confidence 677778888888888888888888887764321 11122222 278888889999999999
Q ss_pred HHHHhhcccccch---HHHHHHHH-HHHHHh-hhhhcc
Q 045446 228 VFDITGNHGHVLS---LYFAVGLI-FLLALP-LAVPLY 260 (263)
Q Consensus 228 ~~~~~~~~~~~~~---~~~~~~~~-~l~~~~-~~~~~~ 260 (263)
.++..+++.+.++ ....++++ +++..| +.++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~ 298 (591)
T PTZ00207 261 LQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLT 298 (591)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 9999999888766 34444444 566667 777664
No 3
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.89 E-value=2.3e-21 Score=176.27 Aligned_cols=172 Identities=12% Similarity=0.028 Sum_probs=140.5
Q ss_pred hHHHHH-HHHHHHHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHH
Q 045446 13 KWLGFV-TAIWVQATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLI 90 (263)
Q Consensus 13 ~~~~~~-~~~~~~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~ 90 (263)
+|..+. .+.............++..|++.+++|.++++.+|+.+.+.++... .++.|+++||+|||+++..+.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 444433 3333334445566778889999999999999999998888888877 89999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhc-C-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 91 GYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNF-P-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~f-p-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
+++ .++.++ +++.++++|.++|+|.+...+.....+.+.+ | ++|++++|+.....++|..++|.+++.+.+
T Consensus 84 ~~~-----~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 84 ASL-----AAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHH-----HHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 998 666665 4588999999999999998888888888887 5 579999999999999999999999999988
Q ss_pred CChhHHHHHHHHHHHHHHHHHHh
Q 045446 169 SKPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
...|++.+++..+..++.++...
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~ 179 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTA 179 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHH
Confidence 76677777776665555444443
No 4
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.86 E-value=8.6e-21 Score=165.16 Aligned_cols=178 Identities=17% Similarity=0.264 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHHHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHH
Q 045446 13 KWLGFVTAIWVQATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIG 91 (263)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g 91 (263)
||..+..........+..|.++.+.|.+++++|.|+++.+++.+...++..+ .++.|+++||+|||+++..+.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 2 WWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred eEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 4555555555556667788889999999999999999999999999999888 999999999999999999999998888
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCCh
Q 045446 92 YGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKP 171 (263)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~ 171 (263)
.. .++.++ +++.+++.|.++|++.+..++.......+++||+|+++.++.....++|..+++++.+.+.+...
T Consensus 82 ~~-----~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (377)
T TIGR00890 82 FT-----FYAIAD--SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEG 154 (377)
T ss_pred HH-----HHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhccc
Confidence 87 434433 56888899999999999888888888999999999999999999999999888888877766544
Q ss_pred hHHHHH-HHHHHHHHHHHHHhhcccCC
Q 045446 172 SAFLLI-LAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~~~~~~~~~~ 197 (263)
|+..+. .++...+..+....+.++++
T Consensus 155 ~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 155 VPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 554444 44444444444444555443
No 5
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.85 E-value=3e-19 Score=157.83 Aligned_cols=134 Identities=12% Similarity=0.010 Sum_probs=119.9
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
..+..+...|.+++++|.|.+|.+++.+.+.++..+ +++.|++.||+|||+++..+.++++++.. .++.++ +
T Consensus 24 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~-----~~~~a~--~ 96 (393)
T PRK09705 24 LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGAL-----MRELYP--Q 96 (393)
T ss_pred hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHH-----HHHHCc--c
Confidence 346678889999999999999999988888888877 89999999999999999999999999999 667665 4
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
++.+++.|+++|+|.+...+.....+.+++|++|++++|+.......|+.+++.+.+.+.+.
T Consensus 97 ~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 97 SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57888899999999999998888999999998899999999988888999999888877765
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.82 E-value=1.2e-18 Score=153.60 Aligned_cols=146 Identities=8% Similarity=-0.074 Sum_probs=122.1
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
.+......|.+++++|.|+++.+++.+.+.++..+ .++.|++.||+|||+++..+.+...++.. .++.++ ++
T Consensus 25 ~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-----~~~~~~--~~ 97 (390)
T PRK03545 25 EFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHV-----LSALAW--NF 97 (390)
T ss_pred HHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH-----HHHHhc--cH
Confidence 34444567999999999999999988888888776 89999999999999999999999888887 445444 56
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVP 182 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 182 (263)
+.+++.|+++|++.+...+...+.+.|++| |||++++|+.....++|..++|++.+.+.+...|+..+......
T Consensus 98 ~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 172 (390)
T PRK03545 98 TVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGG 172 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHH
Confidence 889999999999999888888999999998 78999999999999999999999998887664455554444333
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.82 E-value=6e-19 Score=156.90 Aligned_cols=181 Identities=8% Similarity=-0.012 Sum_probs=140.3
Q ss_pred chhHHHHHHHHHHH-HhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 11 AAKWLGFVTAIWVQ-ATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
+.||.......... .........+...|.+++++|.|.++.+++.+.+.++..+ +++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 33555544443333 3344566677888999999999999999998888888887 899999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.++.. .++.++ +++.+++.|+++|++.+...+.....+.|++| ++|++++|+.+...++|..+++.+.+.+.
T Consensus 84 ~~~~~-----~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIAST-----ATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHH-----HHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888 444444 45788899999999999998888889999999 67999999999999999999999988776
Q ss_pred C------CChhHHHHHHH-HHHHHHHHHHHhhcccCCC
Q 045446 168 S------SKPSAFLLILA-IVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 168 ~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 198 (263)
+ ...|+..+.+. +...+...+..++++|+|+
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 3 22455555554 3444444555556666553
No 8
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.81 E-value=9.8e-18 Score=151.99 Aligned_cols=161 Identities=12% Similarity=-0.001 Sum_probs=121.4
Q ss_pred CCcccchhch-HHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc-cChHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 045446 28 GNNYTFSNYS-DALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR-LPTSAILIIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 28 ~~~~~~~~~~-p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
...|....+. ..+++++|.++++.+++...+...... .+++|+++|| +||||++..|.+++.+++++. +.++
T Consensus 28 ~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~-----~~~~ 102 (489)
T PRK10207 28 FGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMT-----GMSL 102 (489)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHH-----HHhc
Confidence 4455555444 445888999999999976666655544 8899999999 999999999999999999844 4333
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-C--CCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHH
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-K--NRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIV 181 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~--~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~ 181 (263)
+. ...++++|.++|+|.|...+...+.+.|.|| + +|+++.++.....++|+.++|.+++.+.+...|++.+.+...
T Consensus 103 ~~-~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i 181 (489)
T PRK10207 103 LK-PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA 181 (489)
T ss_pred cc-hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH
Confidence 22 1335578999999999999999999999998 4 357789999999999999999999988877446666665544
Q ss_pred HHHHHHHHHhhcc
Q 045446 182 PAVICLTAVLFLH 194 (263)
Q Consensus 182 ~~~~~~~~~~~~~ 194 (263)
..+.+++.....+
T Consensus 182 ~~~~~~~~~~~~~ 194 (489)
T PRK10207 182 GLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHHHHcc
Confidence 4344444444444
No 9
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.81 E-value=2.2e-18 Score=155.91 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=129.2
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
....+...|.+.+++|.|.++.+|+.+.+.++..+ .++.|+++||+|||+++..+.++..++.+ .++.++ ++
T Consensus 18 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-----~~~~~~--~~ 90 (485)
T TIGR00711 18 STIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL-----LCGVAP--NL 90 (485)
T ss_pred HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH-----HHhCcC--CH
Confidence 34456778999999999999999998999998888 89999999999999999999999998888 556554 46
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICL 187 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (263)
+.+++.|+++|++.+...+.....+.|++| ++|+++.|+......+|..+++.+++.+.+...|++.++...+..++..
T Consensus 91 ~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 91 ELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVV 170 (485)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHH
Confidence 888899999999999999999999999999 7899999999999999999999999988877556666555544444443
Q ss_pred HH
Q 045446 188 TA 189 (263)
Q Consensus 188 ~~ 189 (263)
+.
T Consensus 171 ~~ 172 (485)
T TIGR00711 171 VV 172 (485)
T ss_pred HH
Confidence 33
No 10
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.81 E-value=1.1e-18 Score=153.78 Aligned_cols=181 Identities=17% Similarity=0.137 Sum_probs=141.4
Q ss_pred CCchhHHHHHHHHHHHHhh-CCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHH
Q 045446 9 LPAAKWLGFVTAIWVQATC-GNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSL 86 (263)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~ 86 (263)
..+++|+............ ...+..+...|.+++++|.|+.+.+++.+...++..+ .++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3456676655444443333 3455677788999999999999999988888888877 9999999999999999999998
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHH
Q 045446 87 EGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTA 165 (263)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~ 165 (263)
...++.+ .+...+ +++.+++.|+++|++.+..++.....+.|++| ++|+++.|+.....++|..+++.+.+.
T Consensus 86 ~~~~~~~-----~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 86 LFSAGTL-----ACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHH-----HHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877 334433 56888899999999999999999999999999 679999999999999999999999888
Q ss_pred hhCCC--hhHHHHHHHHHHHHHHHHHHhhcccC
Q 045446 166 LFSSK--PSAFLLILAIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 166 l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
+.+.. .|+..+.......++.+......+|+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 191 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFALWLRKNIPEA 191 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 77542 36666666655555554444444443
No 11
>PRK03699 putative transporter; Provisional
Probab=99.80 E-value=7.9e-18 Score=148.77 Aligned_cols=161 Identities=12% Similarity=0.040 Sum_probs=126.8
Q ss_pred chhHHHHHHHHHHH-HhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 11 AAKWLGFVTAIWVQ-ATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
.|||+....+.... ......+.++...|++++++|+|.++.+++.+...++..+ .++.|++.||+|||+++..+.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34554443333333 2334456778888999999999999999988888888887 899999999999999999999888
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.++.. ....++ +++.+++.|+++|++.+...+.....+.|.+| ++|+++++......++|+.++|.+.+.+.
T Consensus 83 ~i~~~-----l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 83 ILAVA-----GLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHH-----HHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887 334443 45778889999999999888888889999999 56999999998888899999999888776
Q ss_pred CC-ChhHHHHHH
Q 045446 168 SS-KPSAFLLIL 178 (263)
Q Consensus 168 ~~-~~~~~~~~~ 178 (263)
++ ..|+..+..
T Consensus 156 ~~~~gw~~~f~~ 167 (394)
T PRK03699 156 ARSIEWYWVYAC 167 (394)
T ss_pred hccccHHHHHHH
Confidence 54 345555444
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.80 E-value=2.6e-18 Score=152.12 Aligned_cols=183 Identities=13% Similarity=0.041 Sum_probs=139.0
Q ss_pred CCCchhHHHHHHHHHHHHh-hCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHH
Q 045446 8 TLPAAKWLGFVTAIWVQAT-CGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGS 85 (263)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~ 85 (263)
++.+++|.....+...... ....+..+...|.+++++|.|+++.+++.+...++..+ .++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 4456777665555444333 33456677888999999999999999998888888887 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 86 LEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
++..++.+ .+...+ +++.+++.|+++|++.+...+.....+.|++| ++|++++|+.+....+|+.+++.+..
T Consensus 88 ~~~~~~~~-----~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 88 ALFGLFSL-----ATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHH-----HHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877776 333333 45788889999999999999999999999998 67999999999999999999988877
Q ss_pred HhhCCChhHHHHHHHHH-HHHHHHHHHhhcccCC
Q 045446 165 ALFSSKPSAFLLILAIV-PAVICLTAVLFLHENQ 197 (263)
Q Consensus 165 ~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 197 (263)
.+.+...|+..+.+... ..+.......+.+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 161 LAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 66665445555544333 3333333334455543
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.80 E-value=9.7e-18 Score=148.29 Aligned_cols=167 Identities=9% Similarity=0.014 Sum_probs=131.1
Q ss_pred CCchhHHHHHHHHHH-HHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHH
Q 045446 9 LPAAKWLGFVTAIWV-QATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSL 86 (263)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~ 86 (263)
..|+.|..+...... .......|......|.+.+++|.|+++.++..+...++..+ .++.|++.||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 344556554433332 22223444444567889999999999999987777777777 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHH
Q 045446 87 EGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTA 165 (263)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~ 165 (263)
+.+++.+ .+...+ +++.+++.|+++|++.+...+.....+.|++| ++|++++++.....++|..++|++++.
T Consensus 94 ~~~~~~~-----~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~ 166 (394)
T PRK10213 94 LLTLSCL-----LVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF 166 (394)
T ss_pred HHHHHHH-----HHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988877 444443 56889999999999999999999999999998 679999999999999999999999998
Q ss_pred hhCCChhHHHHHHHHHH
Q 045446 166 LFSSKPSAFLLILAIVP 182 (263)
Q Consensus 166 l~~~~~~~~~~~~~~~~ 182 (263)
+.+...|+..+......
T Consensus 167 l~~~~gw~~~f~~~~~l 183 (394)
T PRK10213 167 LGELIGWRNVFNAAAVM 183 (394)
T ss_pred HHhhcCHHHHHHHHHHH
Confidence 88764455555554433
No 14
>PRK10504 putative transporter; Provisional
Probab=99.79 E-value=1.8e-17 Score=149.65 Aligned_cols=158 Identities=12% Similarity=0.065 Sum_probs=128.7
Q ss_pred hCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 27 CGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 27 ~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
....+.++...|.+.+++|.|+.+.+++.+.+.++..+ .++.|+++||+|||+++..+.++..++.+ .++.++
T Consensus 23 ~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~-----~~~~~~- 96 (471)
T PRK10504 23 SLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL-----FCALSG- 96 (471)
T ss_pred HHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH-----HHHHhC-
Confidence 34455566778999999999999999988888888776 89999999999999999999888888777 444443
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAV 184 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 184 (263)
+.+.+++.|+++|++.+...+.....+.|.+| ++|+++.|+.....++|..++|.+.+.+.+...|++.+.+..+...
T Consensus 97 -~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 97 -TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred -CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 45778889999999999999999999999999 6799999999999899999999999988876556666666655444
Q ss_pred HHHHHHh
Q 045446 185 ICLTAVL 191 (263)
Q Consensus 185 ~~~~~~~ 191 (263)
+..+...
T Consensus 176 l~~~~~~ 182 (471)
T PRK10504 176 IGAIATL 182 (471)
T ss_pred HHHHHHH
Confidence 4444433
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=7.3e-17 Score=139.78 Aligned_cols=161 Identities=14% Similarity=0.083 Sum_probs=135.5
Q ss_pred hCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 27 CGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 27 ~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
...-+...-..|++.+|+|.|..+.++..+.+.++..+ .|+...+.||+.||++++....++.++.+ .+..++
T Consensus 26 gttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~-----l~alAp- 99 (394)
T COG2814 26 GTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNL-----LSALAP- 99 (394)
T ss_pred HhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH-----HHHHhc-
Confidence 33455556677999999999999999988888888888 99999999999999999999999999999 777766
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAV 184 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 184 (263)
+++.+.++|++.|+..|.+++....+..+..| +||++++++...+..++..++.+++..+-+...|+..|.......+
T Consensus 100 -~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~l 178 (394)
T COG2814 100 -SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLAL 178 (394)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57999999999999999999999999999998 7899999999999999999999999988877445555554444444
Q ss_pred HHHHHHh-hcc
Q 045446 185 ICLTAVL-FLH 194 (263)
Q Consensus 185 ~~~~~~~-~~~ 194 (263)
++.+..+ .++
T Consensus 179 l~~~~~~~~lP 189 (394)
T COG2814 179 LALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHhCC
Confidence 4444443 444
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.79 E-value=3.6e-18 Score=154.27 Aligned_cols=167 Identities=13% Similarity=0.043 Sum_probs=132.5
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
....+++..|.+++++|.|.++.+++.+.+.+++.+ +++.|+++||+|||+++..+.+..+++.+.+....++.++ +
T Consensus 44 ~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~ 121 (467)
T PRK09556 44 IRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV--S 121 (467)
T ss_pred HhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc--h
Confidence 455677888999999999999999999899999888 9999999999999999999988888887766655555444 5
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC---ChhHHHH-HHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS---KPSAFLL-ILAIVP 182 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~---~~~~~~~-~~~~~~ 182 (263)
++.+++.|+++|++.+...+.....+.+++| ++||+++|+.....++|+++++.+...+... ++|+..+ ..+...
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~ 201 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA 201 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence 6889999999999999999999999999999 6799999999999999999998887655432 2344433 334444
Q ss_pred HHHHHHHHhhcccCC
Q 045446 183 AVICLTAVLFLHENQ 197 (263)
Q Consensus 183 ~~~~~~~~~~~~~~~ 197 (263)
.+++++...+.+++|
T Consensus 202 ~~~~i~~~~~~~~~p 216 (467)
T PRK09556 202 LIIGFIGLRYGSDSP 216 (467)
T ss_pred HHHHHHHHHhCCCCh
Confidence 444455444545443
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.78 E-value=6.7e-18 Score=147.95 Aligned_cols=160 Identities=14% Similarity=0.043 Sum_probs=121.4
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
..++...|.+++++|.|.+|.+++.+.+.+++.+ +++.|+++||+|||+++..+......+.. .....+ +++
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-----~~~~~~--~~~ 80 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-----RLLDPF--NYE 80 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-----HHHHhc--cHH
Confidence 3466777999999999999999998888888887 89999999999999876654444433322 111112 568
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH-HHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL-AIVPAVICL 187 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~ 187 (263)
.+++.|+++|+|.+. ..+......|++| |+|++++++......+|..+++.++..+.+...|+..++. +.+..+..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 899999999999986 4566666789999 7899999999999999999999998888776455555554 555555555
Q ss_pred HHHhhcccCCC
Q 045446 188 TAVLFLHENQP 198 (263)
Q Consensus 188 ~~~~~~~~~~~ 198 (263)
+....++|+|+
T Consensus 160 ~~~~~lp~~p~ 170 (368)
T TIGR00903 160 LVLAALPALPF 170 (368)
T ss_pred HHHHHcCCCCC
Confidence 55556666554
No 18
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.78 E-value=9.8e-18 Score=150.97 Aligned_cols=177 Identities=11% Similarity=0.067 Sum_probs=132.0
Q ss_pred chhHHHHHHHHHHHHh-hCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 11 AAKWLGFVTAIWVQAT-CGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
.++|.++..+...... .+..+.++.+.|++++++|.|+++.+++.+...++..+ .++.|+++||+|||++++.+.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4567766655544432 34456678889999999999999999977777776666 899999999999999999999888
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHH-HHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCI-FLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.++.+ .++.++ +++.+++ .|+++|++.+...++....+.++||++|++++|+.+....+|..++|++.+.+.
T Consensus 95 ~~~~~-----~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 95 SLGMI-----LASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred HHHHH-----HHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 88777 444443 3466654 478999999877677788888999988999999999999999999999998887
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhhcc
Q 045446 168 SSKPSAFLLILAIVPAVICLTAVLFLH 194 (263)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
+...|+..+.......+++.+...+.+
T Consensus 168 ~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 168 ESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 763444444443333333333333333
No 19
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.78 E-value=9.8e-18 Score=146.88 Aligned_cols=158 Identities=11% Similarity=0.046 Sum_probs=125.1
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+....|.+++++|.|.++.+++.+...++..+ .++.|++.||+|||+.+..+.+...++.+.. ...+ +++.
T Consensus 23 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~-----~~~~--~~~~ 95 (385)
T TIGR00710 23 MYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL-----ALSN--NIET 95 (385)
T ss_pred HhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH-----HHHc--cHHH
Confidence 344556889999999999999988888888887 8999999999999999999998888887743 3333 4577
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH-HHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL-AIVPAVICLT 188 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~ 188 (263)
+++.|+++|++.+...+.....+.|++| ++|+++.|+.+....+|..+++.+.+.+.+...|+..+.. +....+..+.
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSAL 175 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999 6799999999999999999999999887765445444443 4333333333
Q ss_pred HHhhcccC
Q 045446 189 AVLFLHEN 196 (263)
Q Consensus 189 ~~~~~~~~ 196 (263)
.....+++
T Consensus 176 ~~~~~~~~ 183 (385)
T TIGR00710 176 IFFILPET 183 (385)
T ss_pred HHHhCCCC
Confidence 33344443
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.77 E-value=1.9e-17 Score=148.21 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=129.6
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
..+.++.+.|.+++++|.|.++.+++.+...++..+ +++.|++.||+|||+++..+.+...++.+. .+.++ +
T Consensus 38 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~-----~~~~~--~ 110 (434)
T PRK11663 38 TRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINIL-----FGFSS--S 110 (434)
T ss_pred hhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHH-----HHHHh--H
Confidence 344667788999999999999999988888888877 899999999999999999999998888873 33333 4
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH-HHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL-AIVPAVI 185 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~-~~~~~~~ 185 (263)
++.+++.|++.|++.|...+.....+.+++| ++|++++|+.+...++|+.+++.+.+.+.+...|+..+.. ++...+.
T Consensus 111 ~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 111 LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 5778888999999999888899999999999 6799999999999999999999999888776445555444 4333334
Q ss_pred HHHHHhhcccCC
Q 045446 186 CLTAVLFLHENQ 197 (263)
Q Consensus 186 ~~~~~~~~~~~~ 197 (263)
.+....+++++|
T Consensus 191 ~~~~~~~~~~~p 202 (434)
T PRK11663 191 GLFLCWRLRDKP 202 (434)
T ss_pred HHHHHHHcCCCH
Confidence 444444555543
No 21
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.77 E-value=3.2e-17 Score=145.86 Aligned_cols=189 Identities=17% Similarity=0.055 Sum_probs=136.3
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHH--hhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccCh
Q 045446 1 MGPFSFPTLPAAKWLGFVTAIWVQA--TCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPT 77 (263)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~ 77 (263)
|..||....++..+..+........ ............|.+.+++|.|.++.++..+.+.++..+ +++.|+++||+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 80 (413)
T PRK15403 1 MQRMPRFFARHAATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGR 80 (413)
T ss_pred CCCCCcccccccHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCc
Confidence 4445544434444544433332221 122333445556788999999999999977777788777 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHH
Q 045446 78 SAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLST 156 (263)
Q Consensus 78 r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~ 156 (263)
|+++..+.+++.++.. .+..++ +++.+++.|+++|++.+...+.....+.|++| ++|++++++.....+++.
T Consensus 81 r~~l~~~~~~~~~~~~-----~~~~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (413)
T PRK15403 81 RPVLITGALIFTLACA-----ATLFTT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAP 153 (413)
T ss_pred hHHHHHHHHHHHHHHH-----HHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888887 445444 45888999999999988777777788889999 568999999999999999
Q ss_pred HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH-HhhcccC
Q 045446 157 AIFTDICTALFSSKPSAFLLILAIVPAVICLTA-VLFLHEN 196 (263)
Q Consensus 157 ~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 196 (263)
.++|.+++.+.+...|+..+.......+++.+. ....++.
T Consensus 154 ~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 154 IIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998888776644555555544444444433 3334443
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.77 E-value=4e-17 Score=145.39 Aligned_cols=146 Identities=15% Similarity=0.188 Sum_probs=123.6
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
.+......|.+++++|.|+.+.+++.+...++..+ +++.|+++||+|||+++..+.+..+++... .+.++ ++
T Consensus 34 ~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~-----~~~~~--~~ 106 (426)
T PRK12307 34 FMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL-----SGLAS--GV 106 (426)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH-----HHHHh--HH
Confidence 34455667889999999999999988888899888 899999999999999999999999988873 33333 46
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVP 182 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 182 (263)
+.+++.|+++|++.+..++.....+.|++| ++|++++|+.....++|..+++.+.+.+.+...|+..+.++...
T Consensus 107 ~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 107 IMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 888999999999999999999999999999 67999999999999999999998888777665566666655444
No 23
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.76 E-value=3.2e-17 Score=148.15 Aligned_cols=168 Identities=14% Similarity=0.109 Sum_probs=124.9
Q ss_pred cccchhchHHHHHHc--------CCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHh
Q 045446 30 NYTFSNYSDALKSLM--------ALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVS 100 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~--------~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~ 100 (263)
....+...|.+++++ +.+..+.+++.+.+.++..+ +++.|+++||+|||+++..+.+++.++.........
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~ 107 (479)
T PRK10077 28 TAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEF 107 (479)
T ss_pred cceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 334455557777776 88999999999999999988 999999999999999999999998888774432110
Q ss_pred c----cCCC-chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh-------
Q 045446 101 E----KIHP-LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF------- 167 (263)
Q Consensus 101 ~----~~~~-~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~------- 167 (263)
. ..++ ..++.++++|+++|++.|...+....++.|++| ++||+++|+.+....+|..+.+.+...+.
T Consensus 108 ~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 187 (479)
T PRK10077 108 GFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASW 187 (479)
T ss_pred ccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 0 0111 124567789999999999999999999999999 67999999999988888888766554432
Q ss_pred -CCChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 045446 168 -SSKPSAFLLILAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 168 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
+...|++.+....+..++..+...+++|.|
T Consensus 188 ~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~ 218 (479)
T PRK10077 188 LNTDGWRYMFASEAIPALLFLMLLYFVPETP 218 (479)
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 223466666665555555555555666654
No 24
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.76 E-value=1e-16 Score=141.60 Aligned_cols=146 Identities=11% Similarity=-0.022 Sum_probs=114.6
Q ss_pred hchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHH
Q 045446 35 NYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSE-KIHPLPYWQM 111 (263)
Q Consensus 35 ~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~-~~~~~~~~~l 111 (263)
.+.|. +++++|.|.++.+++.+...++..+ +++.|+++||+||||++..+.+...++.......... .....+++.+
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 34454 6889999999999988888888887 9999999999999999999998877766543322111 1011235678
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAI 180 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~ 180 (263)
++.|+++|++.+...+.......|++| |+|++++|+.......|..+++.+++.+.+...|+..+....
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 185 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIM 185 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 889999999999999988888889998 789999999988888899999999988877644555544433
No 25
>PRK12382 putative transporter; Provisional
Probab=99.76 E-value=1.6e-16 Score=140.21 Aligned_cols=140 Identities=12% Similarity=-0.033 Sum_probs=110.3
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHh-ccCCCchHHHHHHHHH
Q 045446 39 ALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVS-EKIHPLPYWQMCIFLC 116 (263)
Q Consensus 39 ~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~ 116 (263)
.+++++|.|.++.+++...+.++..+ +++.|+++||+||||++..+.+...++......... ......+++.+++.|+
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 46889999999999988888888887 999999999999999999998876665442211110 1111235677888999
Q ss_pred HHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH
Q 045446 117 MGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL 178 (263)
Q Consensus 117 l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~ 178 (263)
++|++.+...+...+.+.|++| |+|++++|+.+.....|..++|++++.+.+...|+.....
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 183 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALT 183 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 9999999888888888899998 7799999999988888999999998887765445444333
No 26
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1e-17 Score=144.03 Aligned_cols=161 Identities=16% Similarity=0.128 Sum_probs=140.7
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.++...|.++++.++|.+|.+.+.+...+.+.+ -...|.++||.++|+.+..|.++.++..+ +.|+.+ +.+.
T Consensus 47 nF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~ni-----l~Gfs~--s~~~ 119 (448)
T COG2271 47 NFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNI-----LFGFSP--SLFL 119 (448)
T ss_pred hHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHH-----HHhhhh--HHHH
Confidence 478889999999999999999999999999988 89999999999999999999999999988 556554 5677
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHH--HHhhCC-ChhHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDIC--TALFSS-KPSAFLLILAIVPAVIC 186 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~--~~l~~~-~~~~~~~~~~~~~~~~~ 186 (263)
+.+...++|..+|+..|++..++.+||| +|||+..++.++..++|+++.|++. +.+..+ +|+..+++-+++..+++
T Consensus 120 ~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiiva 199 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVA 199 (448)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999 6799999999999999999999998 777666 45555566666777778
Q ss_pred HHHHhhcccCCCC
Q 045446 187 LTAVLFLHENQPA 199 (263)
Q Consensus 187 ~~~~~~~~~~~~~ 199 (263)
++.....|++|++
T Consensus 200 l~~~~~~rd~Pqs 212 (448)
T COG2271 200 LILLFLLRDRPQS 212 (448)
T ss_pred HHHHHHhCCCccc
Confidence 8888888887754
No 27
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.74 E-value=1.6e-16 Score=139.85 Aligned_cols=145 Identities=11% Similarity=0.032 Sum_probs=121.9
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
+......|.+++++|.|.++.++..+...++..+ +++.|+++||+|||+++..+..+.+++.+ .++.++ +++
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-----l~~~~~--~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA-----MFTLSS--SYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH-----HHHHhC--cHH
Confidence 3455567999999999999999988888999888 89999999999999999999999998888 445544 468
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVP 182 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 182 (263)
.+++.|+++|++.+...+.......|++| ++|++++|+......+|..+++++++.+.+...|+..+......
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~ 166 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVF 166 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHH
Confidence 89999999999999888888888899998 56999999999999999999999988877664455555554443
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.74 E-value=2.4e-17 Score=143.94 Aligned_cols=160 Identities=15% Similarity=0.147 Sum_probs=128.4
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
.+.++...|.+++++|.|.++.+++.....++..+ .++.|++.||+|||+++..+.++..++.... +..+ ++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~-----~~~~--~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ-----AFAG--AY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH-----HHHc--CH
Confidence 34566677889999999999999998888888887 8999999999999999999999888887733 3333 46
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH-HHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA-IVPAVIC 186 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~-~~~~~~~ 186 (263)
+.+++.|+++|++.+...+.....+.|++| ++|++++|+.....++|..+++.+.+.+.+...|+..+... ....+..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999 67999999999999999999999999877764455554443 3333333
Q ss_pred HHHHhhcccC
Q 045446 187 LTAVLFLHEN 196 (263)
Q Consensus 187 ~~~~~~~~~~ 196 (263)
+......+++
T Consensus 163 ~~~~~~~~~~ 172 (399)
T TIGR00893 163 VLWLKFIPDP 172 (399)
T ss_pred HHhhheecCC
Confidence 3333344443
No 29
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.74 E-value=1.1e-15 Score=134.80 Aligned_cols=159 Identities=14% Similarity=0.105 Sum_probs=124.4
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+....|.+++++|.|+++.++..+...++..+ .++.|+++||+|||+.+..+.+...++... ....+ +.+.
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~-----~~~~~--~~~~ 93 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL-----CSLAE--TSSL 93 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH-----HHHhC--cHHH
Confidence 334668999999999999999988888888877 899999999999999999999888888873 33333 4577
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHH-HHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLI-LAIVPAVICLT 188 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~ 188 (263)
+++.|+++|++.+..++.....+.|.+| ++|+++.|+.+....++..++|.+++.+.+...|+..+. .+....+..+.
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 7888999999999988889999999998 779999999998888999999888887766544544444 34333333444
Q ss_pred HHhhcccCC
Q 045446 189 AVLFLHENQ 197 (263)
Q Consensus 189 ~~~~~~~~~ 197 (263)
.....+|++
T Consensus 174 ~~~~~~~~~ 182 (392)
T PRK10473 174 SLFILKETR 182 (392)
T ss_pred HHHHcCCCC
Confidence 444455543
No 30
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.74 E-value=2.3e-16 Score=141.08 Aligned_cols=156 Identities=14% Similarity=-0.029 Sum_probs=110.8
Q ss_pred hCCcccchhchHHHHHHcC---CCHHHHHHHHHHH---HHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHH
Q 045446 27 CGNNYTFSNYSDALKSLMA---LTQLQLNNLSVAK---DVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVV 99 (263)
Q Consensus 27 ~~~~~~~~~~~p~l~~~~~---~s~~~~~~i~~~~---~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~ 99 (263)
......++...|.++++++ .+..+.+...... .++..+ ++++|+++||+|||+++..+.+.++++.+ .
T Consensus 35 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~-----~ 109 (432)
T PRK10406 35 WFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL-----V 109 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-----H
Confidence 3445557777899999874 5555544433333 333335 78999999999999999999999999998 5
Q ss_pred hccCCCc------hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh-----
Q 045446 100 SEKIHPL------PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF----- 167 (263)
Q Consensus 100 ~~~~~~~------~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~----- 167 (263)
++.+++. +...+++.|+++|+|.|..++...+++.|++| ++||++.++.......|..+++.+...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 189 (432)
T PRK10406 110 IACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLED 189 (432)
T ss_pred HhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 5544432 12357788999999999999999999999999 77999999887776666666555433221
Q ss_pred ---CCChhHHHHHHHHHHHHHHH
Q 045446 168 ---SSKPSAFLLILAIVPAVICL 187 (263)
Q Consensus 168 ---~~~~~~~~~~~~~~~~~~~~ 187 (263)
+...|+..+.+..++.++..
T Consensus 190 ~~~~~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 190 AELREWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred HHHhccchHHHHHHHHHHHHHHH
Confidence 13456777766655544443
No 31
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.74 E-value=3e-17 Score=141.75 Aligned_cols=149 Identities=22% Similarity=0.233 Sum_probs=120.5
Q ss_pred chhchH-HHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSD-ALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p-~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.....| .+++++|.|.++.+++.+...++..+ .++.|+++||+|||+++..+.+..+++..... +++ +.+.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~-----~~~--~~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA-----FAS--NFWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-----HHC--CHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-----hhh--hHHH
Confidence 445557 78899999999999988888888877 99999999999999999999999888855332 212 3467
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLT 188 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (263)
+++.|+++|++.+...+.....+.|++| |+|++++|+.....++|..+++.+++.+.+...|+..+.+.....++..+
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 8888999999999999999999999999 58999999999999999999999999888554555555544444444433
No 32
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.73 E-value=3.5e-17 Score=153.67 Aligned_cols=181 Identities=13% Similarity=0.099 Sum_probs=140.5
Q ss_pred chhHHHHHHHHHHHHhhC-CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 11 AAKWLGFVTAIWVQATCG-NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
+.+|.+++.+.+.....+ .....+...|.++++++.+..+.+++.+...++..+ .+++|+++||+|||+.++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 344554443333333322 234456678999999999999999998888899888 899999999999999999999888
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.++.+ .+.+++ +++.++++|+++|+|.+...+....++.|.+| ++||+.+++...+..+|..+++.++..+.
T Consensus 243 ~i~~l-----l~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAF-----FSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHH-----HHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877 334433 46888999999999999999999999999999 67999999999999999998888766554
Q ss_pred CC-------------ChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045446 168 SS-------------KPSAFLLILAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 168 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
.. ..|+..+.+..++.++.++..++++|.|+
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 31 23666777776777777777777777654
No 33
>PRK15075 citrate-proton symporter; Provisional
Probab=99.73 E-value=2.3e-16 Score=141.23 Aligned_cols=176 Identities=10% Similarity=-0.012 Sum_probs=122.0
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHH-HhhCCcccchhchHHHHHHcCCCHHHHHH-HHHHHHHhh-----hh-hhHHHhhh
Q 045446 1 MGPFSFPTLPAAKWLGFVTAIWVQ-ATCGNNYTFSNYSDALKSLMALTQLQLNN-LSVAKDVGK-----AF-GLLSGLAS 72 (263)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~s~~~~~~-i~~~~~~~~-----~~-~~~~G~l~ 72 (263)
|..|.+...+..||+......... ........++...|.++++++.++++.++ ..+....+. .+ +++.|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~ 80 (434)
T PRK15075 1 MSTMTPAASRESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYI 80 (434)
T ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Confidence 444444455555665433332222 22334556788899999999998877654 333322221 23 67889999
Q ss_pred cccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch------HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchH
Q 045446 73 DRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP------YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVS 145 (263)
Q Consensus 73 Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~ 145 (263)
||+|||++++.+..++.++.. .++.+++.. ...+++.|+++|++.+...+....++.|++| ++|++++
T Consensus 81 Dr~Grr~~l~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 155 (434)
T PRK15075 81 DRVGRRKGLIVTLSIMASGTL-----LIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT 155 (434)
T ss_pred hhhchHHHHHHHHHHHHHHHH-----HHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence 999999999999999998888 556555321 0146788999999999998888899999999 7799999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhh--------CCChhHHHHHHHHH
Q 045446 146 GILKGYVGLSTAIFTDICTALF--------SSKPSAFLLILAIV 181 (263)
Q Consensus 146 gi~~~~~~lg~~i~~~l~~~l~--------~~~~~~~~~~~~~~ 181 (263)
++......+|..+++.++..+. ++..|+..++....
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9998887777777766665542 23345556555433
No 34
>TIGR00895 2A0115 benzoate transport.
Probab=99.72 E-value=6.1e-17 Score=142.05 Aligned_cols=179 Identities=18% Similarity=0.165 Sum_probs=135.1
Q ss_pred CchhHHHHHHHHHHHHhhC-CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHH
Q 045446 10 PAAKWLGFVTAIWVQATCG-NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLE 87 (263)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~ 87 (263)
.+++|.....+.......+ ..+..+.+.|.+.+++|.|..+.+++.....++..+ .++.|+++||+|||+.+..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 4445555444433333332 344566778999999999999999988888888877 89999999999999999999988
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 88 GLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 88 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
..++.... ...+ +++.+++.+++.|++.+..++...+.+.|++| ++|++++|+......+|..+++.+.+.+
T Consensus 92 ~~~~~~~~-----~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLC-----ALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHH-----HHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 88877733 3333 45778888999999999999999999999999 6799999999999999999999999888
Q ss_pred hCCChhHHHHHHH-HHHHHHHHHHHhhccc
Q 045446 167 FSSKPSAFLLILA-IVPAVICLTAVLFLHE 195 (263)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 195 (263)
.+...|+..+.+. ....+...+...+.++
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 7764444444433 3444444444444444
No 35
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.72 E-value=1.4e-16 Score=142.76 Aligned_cols=161 Identities=17% Similarity=0.111 Sum_probs=124.4
Q ss_pred cchhchHHHHHHcCCC--------HHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhcc
Q 045446 32 TFSNYSDALKSLMALT--------QLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEK 102 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s--------~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~ 102 (263)
..+...|..+.+++.+ +.+.+++.+...++..+ .++.|+++||+|||+++..+.++..++....... ..
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~ 123 (481)
T TIGR00879 46 VIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AF 123 (481)
T ss_pred hhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--cc
Confidence 3445556666666666 89999988888888887 9999999999999999999999988888743221 21
Q ss_pred CCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHH---HHhhCCChhHHHHHH
Q 045446 103 IHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDIC---TALFSSKPSAFLLIL 178 (263)
Q Consensus 103 ~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~---~~l~~~~~~~~~~~~ 178 (263)
..+++.+++.|+++|+|.+...+.....+.|++| ++|++++++.+...++|..+++.+. ....+...|+..+.+
T Consensus 124 --~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 124 --ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred --ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 2234678889999999999999999999999998 6799999999999999999999988 444344556666666
Q ss_pred HHHHHHHHHHHHhhcccC
Q 045446 179 AIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~ 196 (263)
.....++.++...++++.
T Consensus 202 ~~~~~~~~~~~~~~l~~~ 219 (481)
T TIGR00879 202 QLIPAGLLFLGLFFLPES 219 (481)
T ss_pred HHHHHHHHHHHHhcCCCC
Confidence 655555555555555554
No 36
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.72 E-value=4.5e-16 Score=136.91 Aligned_cols=134 Identities=15% Similarity=0.099 Sum_probs=114.6
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.....+.+.|.+++++|.|.++.+++.+...++..+ +++.|+++||+|||+++..+.++..++.. .++.++ +
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~-----~~~~~~--~ 93 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA-----GLGLMV--G 93 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhc--c
Confidence 344456778999999999999999999999999887 99999999999999999999999888887 444443 4
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
++.+++.|+++|++.+...+.....+.+..| ++|++++|.......+|..+++.+.+.+.+.
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 94 FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 6888899999999999888877777777777 7799999999999999999999999887654
No 37
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.72 E-value=1.9e-16 Score=143.74 Aligned_cols=168 Identities=18% Similarity=0.205 Sum_probs=131.7
Q ss_pred chhHHHHHHHHHHHHhh-CCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 11 AAKWLGFVTAIWVQATC-GNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
+++|+............ ......+...|.+++++|.|+.+.+++.....++..+ .++.|+++||+|||+++..+.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 44555443333332222 2334456677999999999999999988888888877 899999999999999999999888
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
+++.... +..+ +++.+++.|++.|++.+..++.....+.|.+| ++|+++.|+......+|..+++.+.+.+.
T Consensus 96 ~~~~~~~-----~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 96 SVGTLAC-----GFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHH-----HHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888743 3333 56888899999999999999999999999999 67999999999999999999999999888
Q ss_pred CCChhHHHHHHHHHHHHH
Q 045446 168 SSKPSAFLLILAIVPAVI 185 (263)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~ 185 (263)
+...|+..+.++.+..+.
T Consensus 169 ~~~~w~~~f~~~~~~~~~ 186 (496)
T PRK03893 169 PVWGWRALFFIGILPIIF 186 (496)
T ss_pred ccCCHHHHHHHHHHHHHH
Confidence 775566666655444433
No 38
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.72 E-value=7.6e-17 Score=140.39 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=126.2
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
....++...|.+++++|.|.++.+++.+...++..+ .++.|+++||+|||+++..+.++..++.+.. ...+ +
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-----~~~~--~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF-----GFST--S 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH-----HHhh--h
Confidence 344566777999999999999999998888888887 8999999999999999999999988888743 3333 4
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHH-HHHHhhCCChhHHHHHH-HHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTD-ICTALFSSKPSAFLLIL-AIVPAV 184 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~-l~~~l~~~~~~~~~~~~-~~~~~~ 184 (263)
++.+++.|++.|++.+...+...+.+.|++| ++|+++.|+.+....+|..++++ +...+.+...|+..+.. +....+
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAII 162 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 5888899999999999999999999999999 67999999999999999999995 44444444344444443 333434
Q ss_pred HHHHHHhhcccC
Q 045446 185 ICLTAVLFLHEN 196 (263)
Q Consensus 185 ~~~~~~~~~~~~ 196 (263)
..+......+++
T Consensus 163 ~~~~~~~~~~~~ 174 (379)
T TIGR00881 163 VSLICFLLLRDS 174 (379)
T ss_pred HHHHHheeeCCC
Confidence 444444444443
No 39
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.72 E-value=3.1e-16 Score=142.54 Aligned_cols=164 Identities=14% Similarity=0.014 Sum_probs=116.5
Q ss_pred CCcccchhchHHHHHHcCCCHHH-HHHH-----HHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHh
Q 045446 28 GNNYTFSNYSDALKSLMALTQLQ-LNNL-----SVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVS 100 (263)
Q Consensus 28 ~~~~~~~~~~p~l~~~~~~s~~~-~~~i-----~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~ 100 (263)
.....++...|.+.++++.+.++ .+++ .....++..+ +++.|+++||+|||+++..+.++++++.+ .+
T Consensus 30 ~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~-----~~ 104 (490)
T PRK10642 30 FDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTF-----CI 104 (490)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-----HH
Confidence 34445666778888888644322 2222 2444566666 89999999999999999999999999998 66
Q ss_pred ccCCCch---H---HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh------
Q 045446 101 EKIHPLP---Y---WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF------ 167 (263)
Q Consensus 101 ~~~~~~~---~---~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~------ 167 (263)
+.+++.. . ..+++.|+++|+|.|..++.+..++.|++| ++||++.++...+..+|..+++.+...+.
T Consensus 105 a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~ 184 (490)
T PRK10642 105 GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA 184 (490)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 6665321 0 136788999999999999999999999998 78999999998777777777665543322
Q ss_pred --CCChhHHHHHHHHHHHHHHHHHHhhcccC
Q 045446 168 --SSKPSAFLLILAIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 168 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
.+..|+..+++..+..++++......+|.
T Consensus 185 ~~~~~gWR~~f~i~~~~~l~~~~~~~~~~es 215 (490)
T PRK10642 185 NFLDWGWRIPFFIALPLGIIGLYLRHALEET 215 (490)
T ss_pred HhcCccHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 13457777777665545444443444444
No 40
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.72 E-value=3.4e-17 Score=147.72 Aligned_cols=150 Identities=13% Similarity=0.035 Sum_probs=117.9
Q ss_pred HcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhc
Q 045446 43 LMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNS 121 (263)
Q Consensus 43 ~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g 121 (263)
++++|..+.+++...+.+++.+ +++.|+++||+|||+++..+.++.+++.+..... . ..+++.+++.|+++|++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~--~~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWA---A--GGGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHH---H--HcCchHHHHHHHHHHHh
Confidence 7899999999999999999888 8999999999999999999998888777643221 1 12346688889999999
Q ss_pred hhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHH-HHHHHhhcccCC
Q 045446 122 TTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVI-CLTAVLFLHENQ 197 (263)
Q Consensus 122 ~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 197 (263)
.+...+.....+.|++| ++|++++|+......+|..+++++.+.+.+. ..|+..+.+..+..++ .++.....+++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999 7899999999999999999999999988776 2555555444333333 333333344433
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.72 E-value=3.3e-16 Score=138.80 Aligned_cols=142 Identities=13% Similarity=0.079 Sum_probs=115.0
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
...+....|.+++++|.|+++.++..+.+.++..+ .++.|+++||+|||+++..+.....++.... ...+ ++
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~-----~~~~--~~ 101 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI-----LLAQ--SI 101 (406)
T ss_pred hhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH-----HHHc--cH
Confidence 33444556888999999999999988888888877 8999999999999999999998888887733 3333 45
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL 178 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~ 178 (263)
+.+++.|+++|++.+...+.....+.|.+| ++|+++.++......++..++|.+.+.+.+...|+..+..
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~ 172 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVL 172 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 778889999999998888888899999999 5688999998888888889999998887766444444444
No 42
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.72 E-value=1.2e-15 Score=135.58 Aligned_cols=131 Identities=13% Similarity=0.104 Sum_probs=114.1
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
.+...|.+++++|.|..|.+++.+...++..+ +++.|++.||+|||+++..|.++.+++...+... .. ..+++.+
T Consensus 22 ~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~--~~--~~~~~~~ 97 (410)
T TIGR00885 22 TNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPA--AE--IMNYTLF 97 (410)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--Hh--hccHHHH
Confidence 45777999999999999999999999999888 8999999999999999999999999998754322 11 1256888
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
++.|++.|+|.|..++.....+.+..| ++|++.+++.+..+++|..+++.+...+.
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999989888 66999999999999999999999888775
No 43
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.71 E-value=1.7e-15 Score=138.12 Aligned_cols=218 Identities=17% Similarity=0.071 Sum_probs=148.8
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
+...+.+.+++|-+ ++..|+.+...++..+ .++.|+++|.+|||..++.|.++..+|.+ .++.++ +...++
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~I-----v~atA~--~~~~~i 135 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSI-----VCATAQ--NMNTFI 135 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHH-----HhhcCC--cHHHHH
Confidence 34456778888876 5667788888888877 89999999999999999999999999999 877776 457789
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH-H
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTA-V 190 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 190 (263)
.+..+.|+|.|.... ....+.|..| |.|+...++.....-.....++.+...+..+..|++.+.+......++++. .
T Consensus 136 ag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 136 AGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999877654 4555789999 568777766655443434455666666655555666655554443444333 3
Q ss_pred hhcccCCCCCC--CCCCccc---cchHHHHHHHHHHHHHHHHHHHHhhc-ccccch---HHHHHHHHHHHHHhhhhhcc
Q 045446 191 LFLHENQPASG--PVEDRQE---TEFFHIFNVLAIAVAVYLLVFDITGN-HGHVLS---LYFAVGLIFLLALPLAVPLY 260 (263)
Q Consensus 191 ~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~~~~~~~~ 260 (263)
++.+++++++. ++.++++ +-|+...++...++.++++..+...+ +.+|++ +...+..++++.++..+|.+
T Consensus 215 ~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~ 293 (599)
T PF06609_consen 215 FFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF 293 (599)
T ss_pred HHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh
Confidence 34444332221 1111111 23555666666778888887776665 356666 66777777788888888864
No 44
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.71 E-value=1e-15 Score=135.63 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=117.0
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
...++...+++++++|.|..+.+.......+.... .++.|+++||+|||+++..+.+...++.+.. ...+ ++
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~-----~~~~--~~ 99 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM-----AIAH--EP 99 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH-----HHhc--cH
Confidence 33455555667899999999999977777777666 8999999999999999999999988888743 3333 45
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIV 181 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~ 181 (263)
|.+++.|+++|++.+...++..+.+.+++| ++|++++|+......+|..++|.+++.+.+.+ |+..+.....
T Consensus 100 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g-~~~~f~~~~~ 172 (400)
T PRK11646 100 WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYD-FRLVCATGAV 172 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHH
Confidence 788889999999998888888899999998 68999999999999999999999999887434 4444444333
No 45
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.71 E-value=1.5e-15 Score=134.08 Aligned_cols=160 Identities=11% Similarity=0.042 Sum_probs=123.0
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
+.+....|.+.+++|.|+++.+++.....++..+ .++.|+++||+|||+++..+.....++.+.. ...+ +++
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-----~~~~--~~~ 97 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA-----LFAH--SLT 97 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH-----HHHc--cHH
Confidence 3444556889999999999999988888888887 8999999999999999999998888887743 2333 457
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH-HHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA-IVPAVICL 187 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~ 187 (263)
.+++.|+++|++.+...+.......|.+| ++|+++.+..+....++..++|.+.+.+.+...|+..+... +...+..+
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 88889999999988877777778888888 67999999998888889999999988877654455444443 33333334
Q ss_pred HHHhhcccCC
Q 045446 188 TAVLFLHENQ 197 (263)
Q Consensus 188 ~~~~~~~~~~ 197 (263)
....+.+|++
T Consensus 178 ~~~~~~~~~~ 187 (394)
T PRK11652 178 SMARWMPETR 187 (394)
T ss_pred HHHHhCCccC
Confidence 4444455543
No 46
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=5.9e-18 Score=146.82 Aligned_cols=166 Identities=16% Similarity=0.179 Sum_probs=137.9
Q ss_pred hhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 045446 26 TCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 26 ~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
-...-|...--.+..++.+|.++++.+.+++...+...+ .|+.|+++|||.||.++.+|..++.++.+ .+++..
T Consensus 45 ny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~-----~~~fs~ 119 (493)
T KOG1330|consen 45 NYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF-----ASGFSN 119 (493)
T ss_pred HHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH-----HHHHHH
Confidence 345667777667889999999999999999999998877 99999999999999999999999999999 777663
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHH-HHHHH
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLL-ILAIV 181 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~-~~~~~ 181 (263)
.+|++.+.|.+.|+|.+...+.+.+.+.+.|| ++|+++.++.+.....|+.++-..+..+.+. ++|++-+ ..+++
T Consensus 120 --~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl 197 (493)
T KOG1330|consen 120 --HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVL 197 (493)
T ss_pred --HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHH
Confidence 68999999999999999999999999999999 6799999999998888888877766665544 4455544 44555
Q ss_pred HHHHHHHHHhhcccCCC
Q 045446 182 PAVICLTAVLFLHENQP 198 (263)
Q Consensus 182 ~~~~~~~~~~~~~~~~~ 198 (263)
..+++++..++.+||++
T Consensus 198 ~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 198 GVIVGLLVFLFVREPER 214 (493)
T ss_pred HHHHHHHHHhhccCccc
Confidence 55556666667777665
No 47
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.70 E-value=3e-16 Score=141.20 Aligned_cols=162 Identities=14% Similarity=0.069 Sum_probs=118.9
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.++...|.++++ |.|.++.++..+...++..+ +++.|+++||+|||+++..+.++.+++.+.+..... ...+++.
T Consensus 47 ~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~---~~~~~~~ 122 (452)
T PRK11273 47 NFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW---ATSSIAV 122 (452)
T ss_pred HHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc---ccccHHH
Confidence 456677888888 99999999988888888887 999999999999999999999988888874433211 1124567
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH-HhhCCChhHHHHHH-HHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT-ALFSSKPSAFLLIL-AIVPAVICL 187 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~-~l~~~~~~~~~~~~-~~~~~~~~~ 187 (263)
+++.|++.|++.+..++.....+.+++| ++|++++|+.+...++|+.+.+++.. .+.....|+..+++ +....+..+
T Consensus 123 ~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~ 202 (452)
T PRK11273 123 MFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVAL 202 (452)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 7888999999999888888888899998 67999999999888888766555432 22222234444444 444444445
Q ss_pred HHHhhcccCC
Q 045446 188 TAVLFLHENQ 197 (263)
Q Consensus 188 ~~~~~~~~~~ 197 (263)
+...+++++|
T Consensus 203 l~~~~~~~~~ 212 (452)
T PRK11273 203 FAFAMMRDTP 212 (452)
T ss_pred HHHHHccCCH
Confidence 5555666543
No 48
>PRK11043 putative transporter; Provisional
Probab=99.70 E-value=1.2e-15 Score=135.00 Aligned_cols=157 Identities=14% Similarity=0.069 Sum_probs=120.6
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+....|.+++++|.|+++.+++.+...++..+ .++.|+++||+|||+++..+.+...++.. .+...+ +++.
T Consensus 24 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-----~~~~~~--~~~~ 96 (401)
T PRK11043 24 MYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSL-----GMLWVE--SAAQ 96 (401)
T ss_pred HHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHH-----HHHHhc--CHHH
Confidence 334445677899999999999988888888887 89999999999999999999888887777 333333 4578
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTA 189 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 189 (263)
+++.|+++|++.+...+.......|++| ++|+++.+......+++..++|.+.+.+.+...|+..+.+.....++..+.
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 8889999999988777777788899998 557888888888888999999999998877644555544443333433333
Q ss_pred Hhhccc
Q 045446 190 VLFLHE 195 (263)
Q Consensus 190 ~~~~~~ 195 (263)
....++
T Consensus 177 ~~~~~~ 182 (401)
T PRK11043 177 TLRLKP 182 (401)
T ss_pred HHHcCC
Confidence 444443
No 49
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.70 E-value=5.6e-16 Score=134.39 Aligned_cols=159 Identities=11% Similarity=0.067 Sum_probs=124.9
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
....|.+.++.+.|..+.+++.+...++..+ .++.|+++||+|||+++..+.++..++......... .++.+++.++
T Consensus 19 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 96 (365)
T TIGR00900 19 QVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL--LGGLNIWQVY 96 (365)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH--cCCCcHHHHH
Confidence 3445778888999999999998888888887 999999999999999999998887777664433211 1122568888
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHh
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
+.|+++|++.+...+...+.+.|++| ++|+++.|+.+...++|..+++.+++.+.+...|+..+.......++..+...
T Consensus 97 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 97 VLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 67999999999999999999999998887664455555554444444444444
Q ss_pred hcc
Q 045446 192 FLH 194 (263)
Q Consensus 192 ~~~ 194 (263)
..+
T Consensus 177 ~~~ 179 (365)
T TIGR00900 177 SVR 179 (365)
T ss_pred hcc
Confidence 443
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=99.70 E-value=3.4e-15 Score=133.85 Aligned_cols=134 Identities=16% Similarity=0.118 Sum_probs=112.9
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
....+.+.|.+++++|.|+++.++..+.+.++..+ +++.|++.||+|||+++..+..+++++.+.+.. ...++ ++
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~--~~~a~--~~ 117 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWP--AAEIM--NY 117 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--HHhcC--CH
Confidence 44566778999999999999999999999999888 999999999999999999999999999874321 12233 56
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcCCC-CCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKN-RGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~-rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
+.+++.|+++|+|.+..++.....+.+..|++ |++.+++.+...++|..+++.++..+.
T Consensus 118 ~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 118 TLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999888877754 556799999999999999988876544
No 51
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.70 E-value=7.2e-16 Score=139.64 Aligned_cols=128 Identities=14% Similarity=0.072 Sum_probs=102.1
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
..+.+..+.|.+++++|+|.++.+++.+...++..+ .++.|+++||+|||+++..+.+..+++.. ..+..+ +
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~-----~~~~~~--s 123 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVF-----CMSLVS--S 123 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH-----HHHHhc--C
Confidence 345677778999999999999999988888888877 79999999999999999998888887776 334333 4
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
++.+++.|+++|++.+.. .+....+.+++| ++||+++|+.+....+|+.+++.+..
T Consensus 124 ~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~ 180 (476)
T PLN00028 124 ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMP 180 (476)
T ss_pred HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHH
Confidence 477778899999888764 345567889999 67999999998766677766655444
No 52
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.70 E-value=4e-16 Score=142.19 Aligned_cols=166 Identities=14% Similarity=0.074 Sum_probs=126.0
Q ss_pred cchhchHHHHHH-----cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 32 TFSNYSDALKSL-----MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 32 ~~~~~~p~l~~~-----~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
..+...|.++++ .+.+..+.+++.....++..+ .++.|+++||+|||+++..+.++..++.+....... ..+.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~-~~~~ 112 (502)
T TIGR00887 34 CISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG-SSPK 112 (502)
T ss_pred HHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC-cccc
Confidence 345555666554 245566778888888998888 899999999999999999999988888874332110 0000
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC----------------
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS---------------- 168 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~---------------- 168 (263)
.+++.++++|+++|++.|...+....++.|++| ++||+++++......+|..+++.+...+..
T Consensus 113 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (502)
T TIGR00887 113 SVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCT 192 (502)
T ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence 125678899999999999999999999999999 779999999999988988888877654421
Q ss_pred -------CChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045446 169 -------SKPSAFLLILAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 169 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
+..|+..+.+..++.++.++...+++|.|+
T Consensus 193 ~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 193 GSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred ccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 124777777777777777776677777654
No 53
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.70 E-value=2.8e-15 Score=133.71 Aligned_cols=147 Identities=14% Similarity=0.063 Sum_probs=110.1
Q ss_pred HHHHHHHHH-HHhhCCcccchhchHHHHH-HcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHH
Q 045446 15 LGFVTAIWV-QATCGNNYTFSNYSDALKS-LMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIG 91 (263)
Q Consensus 15 ~~~~~~~~~-~~~~~~~~~~~~~~p~l~~-~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g 91 (263)
+.+...... ..+...-+.++...+.+.+ ++|+|++|.+++.+...+...+ .++.|++.||+|+|+++..+.++..+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 444434333 2334455667777788765 8999999999977766666666 788999999999999999999998888
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 92 YGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
......+..... .+++.+++.|++.|++ +..+++....+.++|| ++||+++|+.....++|..+.+.+..
T Consensus 114 ~~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 114 CVWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 874443222222 3678899999999997 6678889999999999 67999999997666666665544443
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.70 E-value=4.3e-15 Score=130.14 Aligned_cols=157 Identities=10% Similarity=0.063 Sum_probs=124.2
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
+....|.+.+++|.|.++.+++.+...++..+ .++.|+++||+|||+++..+.+...++.... ...+ +++.+
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~-----~~~~--~~~~~ 82 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVAC-----ALAQ--TIDQL 82 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHH-----HHHc--cHHHH
Confidence 34566888999999999999988888888877 8999999999999999999999888888743 3333 45778
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH-HHHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA-IVPAVICLTA 189 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~ 189 (263)
++.|+++|++.+...+.....+.|++| ++|++++|+......+|..+++.+.+.+.+...|+..+... ....+..+..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 888999999999988889999999999 67999999999999999999999988887653344444443 3333333344
Q ss_pred HhhcccC
Q 045446 190 VLFLHEN 196 (263)
Q Consensus 190 ~~~~~~~ 196 (263)
....+++
T Consensus 163 ~~~~~~~ 169 (377)
T PRK11102 163 FFFIPET 169 (377)
T ss_pred HHhCCcc
Confidence 4455554
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.70 E-value=5.8e-16 Score=138.78 Aligned_cols=164 Identities=15% Similarity=0.090 Sum_probs=122.2
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
...+....|.+++ .|.|+++.+++.+...++..+ .++.|+++||+|||+.+..+.++.+++.+..... ... ..++
T Consensus 43 ~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~ 118 (438)
T TIGR00712 43 RKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFV--PWA-TSSI 118 (438)
T ss_pred hccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcc--ccc-cchH
Confidence 3344555677776 599999999988888888877 8999999999999999999988888887743221 111 1245
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHH-HHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLIL-AIVPAVI 185 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~-~~~~~~~ 185 (263)
+.+.+.|++.|++.+..++.....+.|++| ++||+++|+.+...++|+.+++++.+...+. ..|+..+.. +....+.
T Consensus 119 ~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~ 198 (438)
T TIGR00712 119 AIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIV 198 (438)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 667788999999999888888889999998 6799999999999999999998887765543 345555554 4333343
Q ss_pred HHHHHhhcccCC
Q 045446 186 CLTAVLFLHENQ 197 (263)
Q Consensus 186 ~~~~~~~~~~~~ 197 (263)
.++.....+++|
T Consensus 199 ~~~~~~~~~~~~ 210 (438)
T TIGR00712 199 ALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHhccCCH
Confidence 445555555543
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.69 E-value=5.5e-16 Score=135.10 Aligned_cols=133 Identities=16% Similarity=0.153 Sum_probs=106.8
Q ss_pred CCcccchhchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 28 GNNYTFSNYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 28 ~~~~~~~~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
...+.++.+.|. +++++|+|+.+.+++.....++..+ .++.|+++||+|||+.+..+.+...++.... ...+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~-----~~~~~ 89 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA-----GLAVQ 89 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH-----HHHhh
Confidence 344567777885 8999999999999998888888887 8999999999999999999999998888743 33321
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
+++.+++.|+++|++.+. .++....+.+++| ++|++++++......+|..+++.+.+.+.
T Consensus 90 -~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 90 -SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred -hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 457788899999998664 5667888999999 67999999998766677666666554443
No 57
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.69 E-value=1.1e-15 Score=135.13 Aligned_cols=157 Identities=13% Similarity=0.028 Sum_probs=113.5
Q ss_pred cchhchHHHHHHcCCCHHHH-----HHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 32 TFSNYSDALKSLMALTQLQL-----NNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~-----~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
.+..+.|.+.+++|.+..+. +++.+...++..+ .++.|+++||+|||+++..+.+...++.... ...+
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-----~~~~- 105 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM-----GLAQ- 105 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH-----HHHh-
Confidence 44566788888899886553 5666666666666 8999999999999999999988887777633 2222
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAV 184 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 184 (263)
+++.+++.|++.|++.+. .+.....+.+++| ++|+++.|+......+|..+++.+.+.+.+...|+..+.......+
T Consensus 106 -~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (408)
T PRK09874 106 -NIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLF 183 (408)
T ss_pred -hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 467888899999987654 5666777788888 6799999999998889999999999888765334444444333333
Q ss_pred -HHHHHHhhcccC
Q 045446 185 -ICLTAVLFLHEN 196 (263)
Q Consensus 185 -~~~~~~~~~~~~ 196 (263)
..+......+++
T Consensus 184 ~~~~~~~~~~~~~ 196 (408)
T PRK09874 184 LCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHhccC
Confidence 333333444543
No 58
>PRK10054 putative transporter; Provisional
Probab=99.69 E-value=1.9e-15 Score=133.76 Aligned_cols=146 Identities=9% Similarity=0.043 Sum_probs=111.5
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
.+.+.+.+++++|+|..+.+++.+...+...+ +++.|+++||+|||+++..+.+...++.... ...+ +++.+
T Consensus 27 ~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~-----~~~~--~~~~~ 99 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI-----PLVN--NVTLV 99 (395)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH-----HHHh--HHHHH
Confidence 44455667889999999999987777777766 9999999999999999999988877777633 3333 34667
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVIC 186 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 186 (263)
++.+.+.|.+.+...+.......|.+| ++|+++.|+.....++|..++|.+++.+.+.+ |+..+.......++.
T Consensus 100 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g-~~~~f~~~~~~~~i~ 174 (395)
T PRK10054 100 VLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQS-INLPFWLAAICSAFP 174 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHH
Confidence 777878777777767777788888888 67999999999999999999999999877544 344444443333333
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.69 E-value=3e-15 Score=130.29 Aligned_cols=131 Identities=13% Similarity=0.065 Sum_probs=111.9
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
..++...|.+++++|.|.++.+++.+...++..+ .++.|++.||+|||+++..+.+...++.. .+ ..+ +.+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-----~~-~~~--~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGIL-----IR-SAP--GTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHH-----HH-Hhc--cHH
Confidence 3456788999999999999999998888888888 99999999999999999999888777766 33 223 346
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.+++.|+++|+|.+...+.......|++|++|++++|+.+...++|..+++.+.+.+.+.
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 778889999999998887778888899998899999999999999999998888877654
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.69 E-value=5.7e-16 Score=136.97 Aligned_cols=151 Identities=13% Similarity=0.039 Sum_probs=117.2
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
...+.+.++++.++.+.+++.+.+.+...+ .|+.|+++||+|||+++..+.++..++.+.. .... + .++
T Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~-----~~~~--~---~~~ 93 (393)
T PRK11195 24 FAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM-----LFGI--H---PLL 93 (393)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH-----HHHH--H---HHH
Confidence 334556788999999999988888888877 9999999999999999999999888877633 2221 1 256
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhh
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLF 192 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
.|+++|++.+...++..+.+.|++| |+|++++|+.+....++..++|.+++.+.+.. +...+.+.....+.+......
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~~~~~~ 172 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAALFNLF 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999 67999999999999999999999999887654 333333333333333333444
Q ss_pred cccC
Q 045446 193 LHEN 196 (263)
Q Consensus 193 ~~~~ 196 (263)
++++
T Consensus 173 l~~~ 176 (393)
T PRK11195 173 IPRL 176 (393)
T ss_pred CCCC
Confidence 5443
No 61
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.68 E-value=6e-15 Score=130.76 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=104.8
Q ss_pred chHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 36 YSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 36 ~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
+.|.+.+++|.|.++.+++.+.+.++..+ .++.|++.||+||||++..+.+...++..... ..+... .+++.+++.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFI--VFGLGH-ANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH--HHhccC-ccHHHHHHH
Confidence 44666688999999999988888888877 99999999999999999999998888765331 112221 245777888
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHH-HHHHHHHHHhhCC
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLST-AIFTDICTALFSS 169 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~-~i~~~l~~~l~~~ 169 (263)
|.++|+|.+...+.....+.+++| |||++++|+.+...++|. .+++.+.+.+.+.
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999988877777777888887 789999999999988886 4677777776655
No 62
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.68 E-value=1.9e-15 Score=133.38 Aligned_cols=160 Identities=13% Similarity=0.018 Sum_probs=131.4
Q ss_pred CCcccchhchHHHHHHcCCCHHH-HHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 28 GNNYTFSNYSDALKSLMALTQLQ-LNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 28 ~~~~~~~~~~p~l~~~~~~s~~~-~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
..--..++..|.+++++|+|++| .+.+......++.+ .+++|+++||+|.|+++..+.+...+...+. +++.
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~-----~fa~- 113 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLL-----LLGT- 113 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH-----HHHH-
Confidence 34456777889999999999999 88899999999988 8999999999999999999999998888844 3333
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHH---HHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLI---LAIV 181 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~---~~~~ 181 (263)
+++.+.+.|++.|++.|... +...++.+||| ++|++++|+..+...+|.++++++.+.+...+ |+.... +...
T Consensus 114 -Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~g-Wr~y~~Ln~Isl~ 190 (511)
T TIGR00806 114 -SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLG-WISYSTLNIISLV 190 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-chhHHHHHHHHHH
Confidence 46889999999999999999 99999999999 78999999999999999999999999844334 433333 3444
Q ss_pred HHHHHHHHHhhcccC
Q 045446 182 PAVICLTAVLFLHEN 196 (263)
Q Consensus 182 ~~~~~~~~~~~~~~~ 196 (263)
...++++..++++.+
T Consensus 191 s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 191 FMTFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHHHHhCCCC
Confidence 555666777776643
No 63
>PRK09952 shikimate transporter; Provisional
Probab=99.67 E-value=3.8e-15 Score=133.57 Aligned_cols=151 Identities=11% Similarity=0.091 Sum_probs=108.1
Q ss_pred CcccchhchHH-HHHHc--CCCHHHHHHHHH-----HHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHH
Q 045446 29 NNYTFSNYSDA-LKSLM--ALTQLQLNNLSV-----AKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVV 99 (263)
Q Consensus 29 ~~~~~~~~~p~-l~~~~--~~s~~~~~~i~~-----~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~ 99 (263)
....++...|. +.+++ +.++.+ +++.. ...++..+ +++.|+++||+|||+++..+.++++++.. .
T Consensus 37 d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~-----~ 110 (438)
T PRK09952 37 DFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATA-----L 110 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH-----H
Confidence 34445555564 45555 677663 44332 22233445 67889999999999999999999999988 6
Q ss_pred hccCCCch------HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC----
Q 045446 100 SEKIHPLP------YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS---- 168 (263)
Q Consensus 100 ~~~~~~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~---- 168 (263)
++.+++.. .+.+++.|+++|++.|..++.+..++.|++| ++||+..+..+.+..+|..+++.+...+..
T Consensus 111 ~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~ 190 (438)
T PRK09952 111 IGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTD 190 (438)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 66665421 1247778999999999999999999999999 679999999998888888888776655431
Q ss_pred ----CChhHHHHHHHHHHHHH
Q 045446 169 ----SKPSAFLLILAIVPAVI 185 (263)
Q Consensus 169 ----~~~~~~~~~~~~~~~~~ 185 (263)
...|+..+.+..++.++
T Consensus 191 ~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 191 EQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHhhccChHHHHHHHHHHHHH
Confidence 23466666665554433
No 64
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.66 E-value=8.1e-15 Score=133.48 Aligned_cols=156 Identities=10% Similarity=0.034 Sum_probs=115.9
Q ss_pred CCcccchhchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc-cChHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 045446 28 GNNYTFSNYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR-LPTSAILIIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 28 ~~~~~~~~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
...|.+..+.|. +++++|+|+++.+++...+...... .+++|+++|| +|||+++..|.+...+++..+ ..++
T Consensus 35 ~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~-----~~~~ 109 (500)
T PRK09584 35 FGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV-----AWSG 109 (500)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH-----HHhc
Confidence 344555555555 5788999999998866555544444 6789999999 599999999999999888733 3332
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCC-C--CCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHH
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPK-N--RGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIV 181 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~-~--rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~ 181 (263)
+ ..+.+.+.+.++|+|.|...+...+.+.++||+ + |.++.++.+...++|+.++|.+.+.+.++..|+..+..+.+
T Consensus 110 ~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 110 H-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred c-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 2 234566778999999999888888999999983 3 44678888888999999999999998876456666666554
Q ss_pred HHHHHHHH
Q 045446 182 PAVICLTA 189 (263)
Q Consensus 182 ~~~~~~~~ 189 (263)
...++++.
T Consensus 189 ~~~i~~i~ 196 (500)
T PRK09584 189 GMLITVVN 196 (500)
T ss_pred HHHHHHHH
Confidence 44444433
No 65
>TIGR00898 2A0119 cation transport protein.
Probab=99.66 E-value=5e-16 Score=141.48 Aligned_cols=157 Identities=15% Similarity=0.242 Sum_probs=125.8
Q ss_pred ccchhchHHHHHHcCCC---HHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 045446 31 YTFSNYSDALKSLMALT---QLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPL 106 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s---~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (263)
|..+.+.|.++++++++ +.+.++..+.+.++..+ .++.|+++||+|||+++..+.++..++.+ ..+.++
T Consensus 106 ~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~-----~~~~~~-- 178 (505)
T TIGR00898 106 YSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGV-----LTAFSP-- 178 (505)
T ss_pred ecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHH-----HHHHcc--
Confidence 33346778899999999 89999999999999988 89999999999999999999998888877 444444
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVI 185 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 185 (263)
+++.+++.|++.|++.+...+....++.|++| ++|+++.++......+|..+++.+...+.+ |+..+.....+.++
T Consensus 179 ~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~ 255 (505)
T TIGR00898 179 NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFL 255 (505)
T ss_pred cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999 679999999988888888887777654432 55555555555555
Q ss_pred HHHHHhhcccCC
Q 045446 186 CLTAVLFLHENQ 197 (263)
Q Consensus 186 ~~~~~~~~~~~~ 197 (263)
..+..++++|.|
T Consensus 256 ~~~~~~~~~esp 267 (505)
T TIGR00898 256 FFLLSWFVPESP 267 (505)
T ss_pred HHHHHHhcCCCh
Confidence 555556666544
No 66
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=8.3e-16 Score=139.26 Aligned_cols=176 Identities=20% Similarity=0.248 Sum_probs=146.7
Q ss_pred hhHHHHHHHHHHH-HhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHH
Q 045446 12 AKWLGFVTAIWVQ-ATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGL 89 (263)
Q Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (263)
..|.+.+++.+.. ...+..+.++++.+.++++++-+.++.+|+.........+ +|+.+.+.||+|.|++.++|.++.+
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 4577766665554 4558888899999999999999999999987777777666 9999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCchHHHHHHH-HHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 90 IGYGVQWLVVSEKIHPLPYWQMCIF-LCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
+|.+ ++.+++ +.|++++. .++.|+|.|+.+.++.+++.++|++||+.|+|+..++.|+|..+.|++...+++
T Consensus 123 ~g~~-----lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 123 LGLL-----LSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHH-----HHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 9999 666655 46888775 888999999999999999999999999999999999999999999999999998
Q ss_pred C-ChhHHHHHHHHHHHHHHHHHHhhccc
Q 045446 169 S-KPSAFLLILAIVPAVICLTAVLFLHE 195 (263)
Q Consensus 169 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (263)
+ +|+...+..+... +..++.....|+
T Consensus 196 ~~G~r~~~l~~~~~~-l~~~~~~~~~rp 222 (509)
T KOG2504|consen 196 KYGWRGALLIFGGIS-LNVLVAGALLRP 222 (509)
T ss_pred HhCcHHHHHHHHHHH-HHHHHHHHHcCC
Confidence 8 6665555555544 444555555555
No 67
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.64 E-value=1.6e-14 Score=130.85 Aligned_cols=159 Identities=11% Similarity=-0.027 Sum_probs=121.9
Q ss_pred CcccchhchHHH-HHH--cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc-cChHHHHHHHHHHHHHHHHHHHHHHhccC
Q 045446 29 NNYTFSNYSDAL-KSL--MALTQLQLNNLSVAKDVGKAF-GLLSGLASDR-LPTSAILIIGSLEGLIGYGVQWLVVSEKI 103 (263)
Q Consensus 29 ~~~~~~~~~p~l-~~~--~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (263)
..|....+.|.+ +++ +|+|+.+.+++...+..+..+ .+++|+++|| +|||+++..+.+..+++.+.+ +.+
T Consensus 25 ~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~-----~~~ 99 (475)
T TIGR00924 25 SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML-----AMS 99 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH-----Hhc
Confidence 345555555655 555 899999999987877777777 8899999999 899999999999999888743 333
Q ss_pred CCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CC---CCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH
Q 045446 104 HPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KN---RGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA 179 (263)
Q Consensus 104 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~---rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~ 179 (263)
+ +++.+++.+.+.|+|.|...+...+.+.+++| ++ |+++.++.....++|+.+++.+.+.+.++..|+..+...
T Consensus 100 ~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~ 177 (475)
T TIGR00924 100 I--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLA 177 (475)
T ss_pred c--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 3 34667778999999999999999999999998 43 888999999999999999999999888763455555554
Q ss_pred HHHHHHHHHHHhhcc
Q 045446 180 IVPAVICLTAVLFLH 194 (263)
Q Consensus 180 ~~~~~~~~~~~~~~~ 194 (263)
....+++.+.....+
T Consensus 178 ~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 178 AVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHHHHHHcc
Confidence 444344444443333
No 68
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.63 E-value=2.7e-14 Score=123.07 Aligned_cols=182 Identities=18% Similarity=0.082 Sum_probs=129.2
Q ss_pred chhHHHHHHHHHHH-HhhCCcccchhchHHHHHHcCCCHHHHHHH-HHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHH
Q 045446 11 AAKWLGFVTAIWVQ-ATCGNNYTFSNYSDALKSLMALTQLQLNNL-SVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
+.+++.+....... .+...-+.++...+.+++++|+|++|.+++ .+....+..+-++.|.+.||+|+|+....+.++.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 33444444444333 333445667888899999999999999994 5555555566999999999999999999999998
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.+-.+....+.. ++++|++++.+++.|++.+. +...+...+++|| |++|.++|+.. ..++|.++...+...+.
T Consensus 90 ~IP~~~~~~a~~----~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 90 LIPCLGLAFAVT----YPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred HHHHHHHHHHcc----CCchHHHHHHHHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 888775544422 23458999999999986654 5778888999999 67999999999 66688888776666665
Q ss_pred CC-C--hhHHHHHHHHHHHHH-HHHHHhhcccCCC
Q 045446 168 SS-K--PSAFLLILAIVPAVI-CLTAVLFLHENQP 198 (263)
Q Consensus 168 ~~-~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (263)
.. + .|+..-.+-.+..++ .+......++.|+
T Consensus 164 ~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~ 198 (417)
T COG2223 164 VAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPE 198 (417)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChh
Confidence 54 3 244443333333344 4555556666555
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.63 E-value=1.3e-14 Score=124.75 Aligned_cols=151 Identities=21% Similarity=0.230 Sum_probs=125.2
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
..+..+...|.+.+++|.|+++.+++.....++..+ .++.|+++||+|||+.+..+.....++...... .+ +
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~-----~~--~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF-----AS--S 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH-----hc--c
Confidence 345566777889999999999999988888888877 899999999999999999999998888884432 22 4
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVIC 186 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 186 (263)
++.+++.|++.|++.+...+.......|++| |+|+++.++.....++|..+++.+.+.+.+...|+..+.......++.
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLL 166 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 5778889999999999999999999999999 579999999999999999999999998887644555555444433333
No 70
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=5.5e-14 Score=120.61 Aligned_cols=133 Identities=17% Similarity=0.127 Sum_probs=119.1
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
...+..|++++.+++|..|.+.+..++..++.+ .++.|++.+|+|+|+.++.|..+.++|+.+++.+... .++..
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~----~~y~~ 106 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS----KSYGF 106 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh----hhHHH
Confidence 456788999999999999999999999999988 9999999999999999999999999999988765332 35666
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
+++..++.|.|.+...+++...+....| ++...-+++.++++++|+.++|.+++.++.
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 7778899999999999999999999998 557788999999999999999999998876
No 71
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.61 E-value=1.5e-15 Score=141.61 Aligned_cols=137 Identities=13% Similarity=0.050 Sum_probs=115.3
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHH--hcc------
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVV--SEK------ 102 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~--~~~------ 102 (263)
..+...|+++++++++..+.+++.+.+.+++.+ .++.|++.||+|||+.+.+|.+++++|.+++.+.- .+.
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 455667899999999999999999999999988 89999999999999999999999999998664331 000
Q ss_pred -----------------C-----------------C--CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchH
Q 045446 103 -----------------I-----------------H--PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVS 145 (263)
Q Consensus 103 -----------------~-----------------~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~ 145 (263)
. . +..+..++++|+++|+|.+..++...+++.|++| ++|++.+
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 0 0 1124556788999999999999999999999999 6799999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhC
Q 045446 146 GILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 146 gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
|+......+|..+++.+++.+.+
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHh
Confidence 99999999999999998887663
No 72
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.61 E-value=2.9e-13 Score=122.01 Aligned_cols=159 Identities=14% Similarity=0.013 Sum_probs=115.3
Q ss_pred CCcccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc-ChHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 045446 28 GNNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL-PTSAILIIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 28 ~~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
...|.+..+.|.+ ++++|+|+++.+.+...+.....+ .+++|+++||+ ||||++..|.++..++.+.+. ..+
T Consensus 23 fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~-----~~~ 97 (493)
T PRK15462 23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG-----ASE 97 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH-----Hhh
Confidence 4566666666765 677999999999977777777666 88999999999 999999999999998887332 111
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-C--CCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHH
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-K--NRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIV 181 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~--~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~ 181 (263)
+ +...+.+...+.++|.|...+...+.+.|.|| + +|.++.++.....++|+.++|.+.+.+.+...|+..+..+..
T Consensus 98 ~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 98 I-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAV 176 (493)
T ss_pred c-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHH
Confidence 1 11223333344456667666777788999998 4 488999999988999999999999998776445555555544
Q ss_pred HHHHHHHHHhh
Q 045446 182 PAVICLTAVLF 192 (263)
Q Consensus 182 ~~~~~~~~~~~ 192 (263)
..+++++....
T Consensus 177 gm~l~li~~~~ 187 (493)
T PRK15462 177 GMIAGLVIFLC 187 (493)
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 73
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=2.2e-14 Score=127.62 Aligned_cols=163 Identities=15% Similarity=0.055 Sum_probs=124.2
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
...+..|.+.++++.++.+.+++.....++..+ +++.|+++||+|||+++..+..+.+++....... ......+++.
T Consensus 35 ~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 112 (417)
T PRK10489 35 LLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN--AFLPEPSLLA 112 (417)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH--HHcCCCcHHH
Confidence 345566888888889999999999999999887 8999999999999999998887777766543221 1112235677
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTA 189 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 189 (263)
+++.|+++|++.+...++....+.+++| ++|+++.++.....++|..+++.+++.+.+...|++.+.......++..+.
T Consensus 113 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 113 IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 8888999999988888888889999998 679999999998899999999999998876534445555554444444444
Q ss_pred HhhcccC
Q 045446 190 VLFLHEN 196 (263)
Q Consensus 190 ~~~~~~~ 196 (263)
....++.
T Consensus 193 ~~~l~~~ 199 (417)
T PRK10489 193 LLRLPAL 199 (417)
T ss_pred HHhCCCC
Confidence 4555443
No 74
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.60 E-value=3.2e-15 Score=134.00 Aligned_cols=154 Identities=14% Similarity=0.143 Sum_probs=128.7
Q ss_pred HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHh
Q 045446 41 KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGG 119 (263)
Q Consensus 41 ~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 119 (263)
+.++++|.+|-+++......|+.+ ++++|+++||+|.|+++..+.++.++++++.-.+ .+.+++.+++.|++||
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~a-----a~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLA-----ASIGFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHH-----HHhcchhhHHHHHHhH
Confidence 456899999999999999999999 8899999999999999999999999998855333 2234466788899999
Q ss_pred hchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 045446 120 NSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLILAIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 120 ~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
++.|..+++...+..+|.| +||++..++..++..+|..+.-++.+.+.+. +|...++..+....+..++..++.++.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999 8899999999999999999999999999887 455555555656656666666666666
Q ss_pred CCC
Q 045446 197 QPA 199 (263)
Q Consensus 197 ~~~ 199 (263)
|++
T Consensus 220 P~~ 222 (466)
T KOG2532|consen 220 PSK 222 (466)
T ss_pred ccc
Confidence 554
No 75
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.60 E-value=4.1e-14 Score=123.59 Aligned_cols=153 Identities=14% Similarity=0.076 Sum_probs=106.8
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHH-HHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 045446 38 DALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIG-SLEGLIGYGVQWLVVSEKIHPLPYWQMCIFL 115 (263)
Q Consensus 38 p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g-~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (263)
+.+++++|.|..+.+++.+...+...+ +++.|+++||+||||.++.. .+...++.. .++.++ +++.+++.|
T Consensus 22 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~-----~~~~~~--~~~~l~~~~ 94 (375)
T TIGR00899 22 LFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACL-----LFAWNR--NYFLLLVLG 94 (375)
T ss_pred HHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH-----HHHhcc--hHHHHHHHH
Confidence 346889999999999987777776666 89999999999998876654 444444444 333333 457788888
Q ss_pred HHHhhchhhhhhhHHHHHhhhcC-CCCCch--HHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHH-HHHh
Q 045446 116 CMGGNSTTWMNTAVLVTCMRNFP-KNRGPV--SGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICL-TAVL 191 (263)
Q Consensus 116 ~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~--~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 191 (263)
.++|.+.+...+.......|..| ++|+++ .+......++|..+++.+.+.+.+...|+..+.......++.. ....
T Consensus 95 ~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 95 VLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88887777777777777778777 345544 5777777889999999999988776445555555444434333 3333
Q ss_pred hcccCC
Q 045446 192 FLHENQ 197 (263)
Q Consensus 192 ~~~~~~ 197 (263)
..+|+|
T Consensus 175 ~~~~~~ 180 (375)
T TIGR00899 175 FLPSYP 180 (375)
T ss_pred hCCCcc
Confidence 455544
No 76
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.57 E-value=9.4e-15 Score=124.78 Aligned_cols=146 Identities=20% Similarity=0.227 Sum_probs=121.5
Q ss_pred HHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhh
Q 045446 42 SLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGN 120 (263)
Q Consensus 42 ~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 120 (263)
.+.+-++++.+++.....+...+ .|+.|.+.||+|+|..+++|.......++++ ++.+ ++++++++|.+||+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilF-----afg~--sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILF-----AFGN--SYPMLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHH-----HHcc--hhHHHHHHHHHhhh
Confidence 34667788899987777777776 9999999999999999999999998888854 3332 57889999999999
Q ss_pred chhhhhhhHHHHHhhhcC-C-CCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHhhcc
Q 045446 121 STTWMNTAVLVTCMRNFP-K-NRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLTAVLFLH 194 (263)
Q Consensus 121 g~~~~~~~~~~~~~~~fp-~-~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
|.+..+++..+++.+.|| + +|++++|+..++.++|-.++|++++.+.+. +....+.+++++..+-+.+-.+.++
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 999999999999999999 3 489999999999999999999999999887 5566677777766655555544443
No 77
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.57 E-value=2.6e-13 Score=123.41 Aligned_cols=167 Identities=17% Similarity=0.128 Sum_probs=112.8
Q ss_pred CcccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 045446 29 NNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPL 106 (263)
Q Consensus 29 ~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (263)
..|.+..+.|.+ ++++|.+..+..+......++..+ .+..|+++||+|||+.+..+.+...++......... ++
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~-- 340 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILIN--SN-- 340 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh--CC--
Confidence 445566677876 567899988877777777777777 889999999999999998887654444332221111 11
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAV 184 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~ 184 (263)
+...+++.+++.|++.+...+.......+.+| +.||+++|+.......++.++|.+.+.+.+. +.|....++...+.+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 33556667888887766666666777788999 6699999986555556778888888877754 333333333344445
Q ss_pred HHHHHHhhcccCCCC
Q 045446 185 ICLTAVLFLHENQPA 199 (263)
Q Consensus 185 ~~~~~~~~~~~~~~~ 199 (263)
++++...+.+|.|+.
T Consensus 421 i~~~~~~~~pes~~~ 435 (490)
T PRK10642 421 IGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHhccccCC
Confidence 555556666665543
No 78
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.53 E-value=2.1e-13 Score=119.37 Aligned_cols=160 Identities=13% Similarity=0.013 Sum_probs=108.7
Q ss_pred ccchhchHHHHHHcC--CCHHHHHHHHHHHH-----Hhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhcc
Q 045446 31 YTFSNYSDALKSLMA--LTQLQLNNLSVAKD-----VGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEK 102 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~--~s~~~~~~i~~~~~-----~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~ 102 (263)
+.++...+.+.+++. .++++.+...+... ++..+ +++.|+++||+|||+++..+.++..++.. .++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~-----~~~~ 84 (394)
T TIGR00883 10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTL-----LIGL 84 (394)
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHH-----HHhh
Confidence 344555666766643 44455544333221 22223 68999999999999999999999988887 4444
Q ss_pred CCCch------HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC-------
Q 045446 103 IHPLP------YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS------- 168 (263)
Q Consensus 103 ~~~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~------- 168 (263)
.++.+ .+.+++.|+++|++.+...+.....+.|++| ++|++..++......+|..+++.+...+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~ 164 (394)
T TIGR00883 85 LPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDAL 164 (394)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHh
Confidence 44321 1246778999999999999999999999998 679999999999988999888877654431
Q ss_pred -CChhHHHHHHHHHHHHHHHHHHhhccc
Q 045446 169 -SKPSAFLLILAIVPAVICLTAVLFLHE 195 (263)
Q Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (263)
...|+..+.......+++.......+|
T Consensus 165 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 192 (394)
T TIGR00883 165 LEWGWRIPFLVSAVLVLIGLYLRRNLEE 192 (394)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 233555555554444444443333343
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.51 E-value=7.9e-13 Score=131.47 Aligned_cols=132 Identities=12% Similarity=0.054 Sum_probs=104.4
Q ss_pred hhchHHHHHHcCCCHHH--HHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 34 SNYSDALKSLMALTQLQ--LNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~--~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
....+.+.++++.+.+. .+++.+.+.++..+ ++++|+++||+|||++++.+.++..++.+.... +...+ +++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~--~~~~~--~~~~ 105 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVL--AYYLG--WFWL 105 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHH--HHHHc--cHHH
Confidence 34445666667766444 56777777888777 899999999999999999887765555543322 22222 4688
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+++.|+++|++.+...++..+++.+++| ++|++++|+.....++|..+++.+++.+...
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999999 7799999999999999999999999887653
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.50 E-value=3.6e-12 Score=110.95 Aligned_cols=153 Identities=9% Similarity=-0.042 Sum_probs=110.9
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhccc-----ChHHHH-HHHHHHHHHHHHHHHHHHhccC-CCc
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRL-----PTSAIL-IIGSLEGLIGYGVQWLVVSEKI-HPL 106 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~~~-~~g~~~~~~g~~~~~~~~~~~~-~~~ 106 (263)
+...|.+.++.|+|.+|.++..... ....+.++.|++.||+ ||||.. ..+.+..++....+ +.. +..
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l-----~~~~~~~ 81 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVG-LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL-----SFLVPST 81 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH-----HcCCcch
Confidence 3456888999999999999986553 3333489999999998 898875 45555555554422 222 223
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCCh--------hHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKP--------SAFLLI 177 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~--------~~~~~~ 177 (263)
+.+.+....++.+.+.+...++..+.+.|++| |+|+++.|+......+|..+++.+.+.+.+... |+..++
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 45666666777788888888888999999998 779999999999999999999999887765533 666666
Q ss_pred HHHHHHHHHHHHHhh
Q 045446 178 LAIVPAVICLTAVLF 192 (263)
Q Consensus 178 ~~~~~~~~~~~~~~~ 192 (263)
+.....++..+..++
T Consensus 162 i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 162 WTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHHH
Confidence 665555554444443
No 81
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=1.4e-12 Score=115.39 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=110.6
Q ss_pred chhchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
+..+.|. +++++|.|+.+.+++.........+ .++.|+++||+|||+.+..+.....+..... ...+ +.+.
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~ 307 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM-----LMAH--SPAI 307 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-----HHHh--hHHH
Confidence 3445565 4677999999988865555555555 7899999999999998887765544433211 1122 2355
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 190 (263)
.++.+++.+++.+...+.......|.+|++||+++++.+....+|..+++.+.+.+.+...++..+....+..+++++..
T Consensus 308 ~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 308 LLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 66678888777777666677778899998899999999888889999999999988876445555555555556666665
Q ss_pred hhcc
Q 045446 191 LFLH 194 (263)
Q Consensus 191 ~~~~ 194 (263)
++.|
T Consensus 388 ~~~~ 391 (393)
T PRK15011 388 LRIK 391 (393)
T ss_pred Hhhc
Confidence 5543
No 82
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.49 E-value=1.3e-12 Score=119.62 Aligned_cols=143 Identities=20% Similarity=0.201 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhh
Q 045446 49 LQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNT 127 (263)
Q Consensus 49 ~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~ 127 (263)
++.+|+.....++..+ .++.|+++|++|||+.++.+.+.+.+|.+ .++.++ ++++++++|+++|+|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~i-----i~~~a~--~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAI-----IIALAP--SWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----HHHHhh--hHHHHHHHHHHhccchhhhhh
Confidence 3558999999999988 99999999999999999999999999999 555554 568899999999999999999
Q ss_pred hHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCC--hhHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 045446 128 AVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSK--PSAFLLILAIVPAVICLTAVLFLHENQPA 199 (263)
Q Consensus 128 ~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (263)
....+..|.-| +.||...+..+....+|..++ .+.+...++. .|+..+.+...+.++..+..++.+|.|+.
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~ 235 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRW 235 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 99999999999 579999999999888766666 5555555443 57777777777777666666676666553
No 83
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.49 E-value=1.4e-12 Score=115.40 Aligned_cols=156 Identities=17% Similarity=0.155 Sum_probs=114.7
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
+....+.|.+.++.|.+..+.+.+.....++..+ .++.|++.||+|||+.+..+.+...++...+ ...+ +.+
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-----~~~~--~~~ 309 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL-----AAAP--SFA 309 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-----HhcC--cHH
Confidence 3344566888778899999999977777777777 8999999999999999887666555544422 2222 234
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICL 187 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~ 187 (263)
.+.+..++.|++.+...+.......|.+| ++||++.|+.+...++|..++|.+.+.+.+. +.+...+.......+.+.
T Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 310 GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 55556667777777777788888999999 6799999999999999999999999998876 344455555544545555
Q ss_pred HHHhhc
Q 045446 188 TAVLFL 193 (263)
Q Consensus 188 ~~~~~~ 193 (263)
......
T Consensus 390 ~~~~~~ 395 (406)
T PRK11551 390 LAALLL 395 (406)
T ss_pred HHHHHH
Confidence 554444
No 84
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.47 E-value=3.8e-11 Score=106.18 Aligned_cols=157 Identities=16% Similarity=0.105 Sum_probs=95.6
Q ss_pred chhchHHHHHHcCCCHHHHHHHHH-HHHHhhhhhhHHHhhhcccChHHHHHH-HHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSV-AKDVGKAFGLLSGLASDRLPTSAILII-GSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~-~~~~~~~~~~~~G~l~Dr~G~r~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+...+.+++++|.|.++.+++.+ ....+...+++.|.+.||+||||.++. +.+...++.. ....++ +++.
T Consensus 35 ~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~-----~~~~~~--~~~~ 107 (393)
T PRK15011 35 TPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACT-----LFAWNR--NYFV 107 (393)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH-----HHHHhh--HHHH
Confidence 344445578999999999999754 445566665555545999999987654 4444445544 222332 4466
Q ss_pred HHHH-HHHHhhchhhhhhhHHHHHhhhcC-CCC--CchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHH-HHHH
Q 045446 111 MCIF-LCMGGNSTTWMNTAVLVTCMRNFP-KNR--GPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIV-PAVI 185 (263)
Q Consensus 111 l~~~-~~l~g~g~~~~~~~~~~~~~~~fp-~~r--g~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~-~~~~ 185 (263)
+++. +++.+. .+...+.......++.| ++| +...++.+...++|..++|++++.+.+...|+..+..... ..+.
T Consensus 108 l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~ 186 (393)
T PRK15011 108 LLFVGVFLSSF-GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVC 186 (393)
T ss_pred HHHHHHHHHHH-HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 5554 444444 34555666666666555 223 2334777778889999999999988876445555544433 3333
Q ss_pred HHHHHhhcccCC
Q 045446 186 CLTAVLFLHENQ 197 (263)
Q Consensus 186 ~~~~~~~~~~~~ 197 (263)
.+......|+.+
T Consensus 187 ~~~~~~~~~~~~ 198 (393)
T PRK15011 187 GVMVWLFLPSMR 198 (393)
T ss_pred HHHHHhhcCccC
Confidence 344444455543
No 85
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.45 E-value=3e-11 Score=106.35 Aligned_cols=142 Identities=12% Similarity=0.002 Sum_probs=102.5
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChH----HHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTS----AILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r----~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
+..+.|.+.+++|.|.++.+++.....+...+ +++.|++.||+||| +...++.+.... . ..... .+
T Consensus 23 ~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~--~-----~~~~~--~~ 93 (382)
T PRK11128 23 FLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV--A-----FWFGA--HS 93 (382)
T ss_pred HhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH--H-----HHHhc--cc
Confidence 34455777888999999999988888888777 99999999999984 333322222111 1 22222 25
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAV 184 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 184 (263)
+|.+++.|.+.|++.+...+...+...++ +++|+++.|.......+|..++|++++.+.+...|+..++.......
T Consensus 94 ~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 94 FWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 68888889999988888888776666554 66789999999988899999999999999877444554444443333
No 86
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.45 E-value=3.9e-12 Score=115.72 Aligned_cols=161 Identities=13% Similarity=0.022 Sum_probs=115.5
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhccc-----ChHHH-HHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRL-----PTSAI-LIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~~-~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
..+...|.+.++.|.|.++.+.++.... .....++.|.++||+ ||||. +..+.+..+++...+.. ..+.
T Consensus 30 ~~~~~l~~~l~~~g~~~~~ig~~~~~~~-~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~----~~~~ 104 (491)
T PRK11010 30 LTSGTLQAWMTVENIDLKTIGFFSLVGQ-AYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGF----LEPG 104 (491)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHH----cCCc
Confidence 3445567888888999999998633322 234589999999999 99886 54555555555553221 1122
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPA 183 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~ 183 (263)
.+++.+.+.+++.+++.+..+++..+...|++| |||+++.++......+|..+++.+...+.+. ..|+..+.......
T Consensus 105 ~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ 184 (491)
T PRK11010 105 TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL 184 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence 356778888999999999888899999999999 7899999999999999999999988888873 34555555544444
Q ss_pred HHHHHHHhhcccCC
Q 045446 184 VICLTAVLFLHENQ 197 (263)
Q Consensus 184 ~~~~~~~~~~~~~~ 197 (263)
++..+..++.+|++
T Consensus 185 ll~~l~~~~~~e~~ 198 (491)
T PRK11010 185 IPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHhcCCCc
Confidence 44444444555543
No 87
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.45 E-value=2.9e-12 Score=114.16 Aligned_cols=161 Identities=19% Similarity=0.115 Sum_probs=95.7
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSE-KIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~-~~~~~~~~~ 110 (263)
.+.+...+++++|+|+.+.+++.....+...+ +++.|+++||+|||+++..+.....++.......... .........
T Consensus 30 ~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (420)
T PRK09528 30 FSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLG 109 (420)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556778999999999988888888877 9999999999999999988766555443322110000 000000011
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 190 (263)
..+.++..|.+.....+.... ..+.++++||+..|......++|..+++.+.+.+.+.++ +..+.......++..+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~-~~~f~~~~~~~~~~~~~~ 187 (420)
T PRK09528 110 AIVGGIYLGFGFLAGAGAIEA-YIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINP-QINFWLGSGSALILLVLL 187 (420)
T ss_pred HHHHHHHhhhhhccchhhhhh-HHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCc-hHhHHHHHHHHHHHHHHH
Confidence 111222223222222222222 223345678889999998889999999999988876544 444444444434444444
Q ss_pred hhccc
Q 045446 191 LFLHE 195 (263)
Q Consensus 191 ~~~~~ 195 (263)
++.++
T Consensus 188 ~~~~~ 192 (420)
T PRK09528 188 FFAKP 192 (420)
T ss_pred hcccc
Confidence 44443
No 88
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.44 E-value=4.9e-12 Score=111.82 Aligned_cols=144 Identities=15% Similarity=0.042 Sum_probs=95.8
Q ss_pred hchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHH
Q 045446 35 NYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEK-IHPLPYWQM 111 (263)
Q Consensus 35 ~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~-~~~~~~~~l 111 (263)
.+.|. +++++|.|..+.+++.....+...+ +++.|+++||+|||+.+..+....+++........... ......+..
T Consensus 23 ~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (396)
T TIGR00882 23 PFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGA 102 (396)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34444 5677999999999988888888877 99999999999999999987766655444322111110 000112334
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAI 180 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~ 180 (263)
++.+++.|++.+...+.......+. ++++++..|......++|.++++.+++.+.+.+ |+..+....
T Consensus 103 ~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~-~~~~f~~~~ 169 (396)
T TIGR00882 103 IVGGLYLGFVFSAGAGAIEAYIEKV-SRNSNFEYGKARMFGCVGWALCASIAGILFSID-PQIVFWLGS 169 (396)
T ss_pred HHHHHHHHHHhccchhhHHHHHHHh-hhhcccccchhhhhcccHHHHHHHHHhhhhccC-chHHHHHHH
Confidence 5557777777776666665554443 344566778888888899999999988776544 444444433
No 89
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.44 E-value=1.6e-12 Score=117.50 Aligned_cols=133 Identities=16% Similarity=0.072 Sum_probs=91.9
Q ss_pred ccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 31 YTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 31 ~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
+....+.|.+ ++++|+|..+.++......++..+ .+..|+++||+|||+....+......+..... . ...+ +.
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~--~-~~~~--~~ 349 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGV--Y-QHAT--SE 349 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHH--H-HhcC--cH
Confidence 3455667764 677999999999987777778777 89999999999999887665544433322111 1 1122 23
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhh-HHHHHHHHHHHhhC
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGL-STAIFTDICTALFS 168 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~l-g~~i~~~l~~~l~~ 168 (263)
+...+.+++.|+..............|.+| ++||++.|+.+....+ |+.++|.+.+.+.+
T Consensus 350 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 350 YMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 445455666664333222222355669999 5799999999988876 76899999999988
No 90
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.43 E-value=4.3e-11 Score=119.21 Aligned_cols=151 Identities=12% Similarity=0.036 Sum_probs=107.3
Q ss_pred HHHHcCCCHHH-HHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHH--HHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 045446 40 LKSLMALTQLQ-LNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSL--EGLIGYGVQWLVVSEKIHPLPYWQMCIFL 115 (263)
Q Consensus 40 l~~~~~~s~~~-~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~--~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (263)
+.++.+.+... .++....+.+...+ ++++|+++||+|||+++..... ........ .+... .+++.+++.|
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~----~~~~~--~s~~~l~~~~ 115 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI----YGFHL--NSVPLLFAAL 115 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH----HHHHH--hhHHHHHHHH
Confidence 33444444334 55566677777766 9999999999999997643221 11111111 11111 2568899999
Q ss_pred HHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhcc
Q 045446 116 CMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLH 194 (263)
Q Consensus 116 ~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
+++|++.++..++..+++.+++| ++|++++|+.+...++|..++|.+++.+.....|+..++......+.+++...+++
T Consensus 116 ~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 116 FLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999 67999999999999999999999999998875566665555444455555555554
Q ss_pred cC
Q 045446 195 EN 196 (263)
Q Consensus 195 ~~ 196 (263)
++
T Consensus 196 ~~ 197 (1140)
T PRK06814 196 KT 197 (1140)
T ss_pred CC
Confidence 43
No 91
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.42 E-value=1.9e-12 Score=96.57 Aligned_cols=126 Identities=15% Similarity=0.173 Sum_probs=96.5
Q ss_pred HHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhh
Q 045446 58 KDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRN 136 (263)
Q Consensus 58 ~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~ 136 (263)
..++..+ .++.|++.||+|||+.+..+.....++.+... ..+ +.+.+.+.+++.|++.+...+.......|.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFA-----LSS--NITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHH-----Hhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3445555 88999999999999999999888877776332 222 457777889999999999888999999999
Q ss_pred cC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHH
Q 045446 137 FP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 137 fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 190 (263)
+| ++|+++.|+.+....+|..+++.+.+.+.+...|+..+.+......+..+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 99 6799999999999999999999999988766445444444433333333333
No 92
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.42 E-value=6.8e-12 Score=111.93 Aligned_cols=159 Identities=9% Similarity=0.117 Sum_probs=109.1
Q ss_pred hchHHHHHHcCCCH--------HHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 35 NYSDALKSLMALTQ--------LQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 35 ~~~p~l~~~~~~s~--------~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
.+.|.+.++.|.++ ++.+.......+.... .++.|++.||+|+|+++..+.+...++...... .....
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~---~~~~~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY---GDPEY 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH---cCcch
Confidence 44466556666553 4445555555555555 789999999999999999999888777653321 11111
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHH-hhhhhHHHHHHHHHHHhhCC-C-----hhHHHH-
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILK-GYVGLSTAIFTDICTALFSS-K-----PSAFLL- 176 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~-~~~~lg~~i~~~l~~~l~~~-~-----~~~~~~- 176 (263)
...+.+++.+++.|++.+...+.....+.|.+| ++||++.|+.+ ...++|..++|.+.+.+.+. + .|+..+
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 123556677899999988888888889999999 67999999997 66789999999999988765 2 244433
Q ss_pred HHHHHHHHHHHHHHhhcccC
Q 045446 177 ILAIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~ 196 (263)
..++...+.++....+.+++
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCc
Confidence 34444444444445555443
No 93
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.41 E-value=2.1e-11 Score=107.43 Aligned_cols=135 Identities=13% Similarity=-0.014 Sum_probs=99.5
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHH----HHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAIL----IIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~----~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
..+.|.+.+++|.|.+|.+++.....+...+ +++.|.++||+|||+.. ..+..++.+ ..+..++ ++
T Consensus 24 ~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~--~~ 94 (382)
T TIGR00902 24 LPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA-------AFSAGAH--NA 94 (382)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-------HHHHhhh--hH
Confidence 3456788889999999999987777777766 99999999999985432 222222221 1222222 56
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL 178 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~ 178 (263)
|.+++.|.+++.+.+...+...++..+ ++++|+++.|......++|.+++|++++.+.+...|+..+..
T Consensus 95 ~~l~~~~~l~~~~~~~~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~ 163 (382)
T TIGR00902 95 WLLFIAIGLFALFFSAGMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAI 163 (382)
T ss_pred HHHHHHHHHHHHHHccchhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHH
Confidence 888888999988888777777776554 467899999999999999999999999999887344444433
No 94
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.40 E-value=6.5e-12 Score=109.21 Aligned_cols=139 Identities=11% Similarity=-0.050 Sum_probs=104.3
Q ss_pred chHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 36 YSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 36 ~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
+.+.+.+++|.++++.+++.....++..+ .++.|++.||+|||+.+..+.+...++...+. ..++.+.+.+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 301 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAML-----FIPMLNDVLFLAT 301 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH-----HcccchhHHHHHH
Confidence 34556677899998888877777777777 89999999999999999988888777776432 2221122233344
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA 179 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~ 179 (263)
..+.|++.+...+.......|.+| ++|+++.|+.+....+|..++|.+.+.+.+...++..+...
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~ 367 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVT 367 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHH
Confidence 566677777776667778889998 67999999999999999999999999888764444444443
No 95
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.40 E-value=1.8e-11 Score=108.55 Aligned_cols=157 Identities=10% Similarity=0.017 Sum_probs=112.3
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhccc-----ChHH-HHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRL-----PTSA-ILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~-~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
...|.+-++.|+|.+|.+++...... ..+.++.|+++||+ |||| .+..+.+..+++...+.. .. ++.++
T Consensus 20 ~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~--~~--~~~~~ 94 (402)
T PRK11902 20 GTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF--CP--PHAAL 94 (402)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh--cC--ccchH
Confidence 34577777789999999998666554 45599999999999 7875 677777777666663321 11 22345
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVIC 186 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~ 186 (263)
+.+....++.+...+..+++..+.+.|++| |||+++.++...+.++|..+++.+...+.+. ..|+..+.+.....++.
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~ 174 (402)
T PRK11902 95 WPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAG 174 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 767777777787888888899999999999 6699999999999899999999988888774 24555555433333333
Q ss_pred HHHHhhcccC
Q 045446 187 LTAVLFLHEN 196 (263)
Q Consensus 187 ~~~~~~~~~~ 196 (263)
.......+|+
T Consensus 175 ~l~~~~~~e~ 184 (402)
T PRK11902 175 ALTTLWAPEP 184 (402)
T ss_pred HHHHHhcCCC
Confidence 3333444444
No 96
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.40 E-value=2.1e-11 Score=110.82 Aligned_cols=142 Identities=13% Similarity=0.070 Sum_probs=98.6
Q ss_pred chhchHHHH-HHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDALK-SLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l~-~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
...+.|.+. +++|.+..+.+++.....++..+ .++.|+++||+|||+++..+..+..++.+... ...+.+.+.
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 368 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVF-----AIGGANVWV 368 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh-----hccccHHHH
Confidence 345667764 68999999999988888888877 89999999999999998887766555443221 111222333
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILA 179 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~ 179 (263)
.....++.+.......+.....+.+.+| ++||+++|+......+|+.++|.+.+.+.+. ++...+...+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 369 LGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLS 439 (496)
T ss_pred HHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 3333444332222234555667889999 6799999999999999999999999988876 3333333333
No 97
>PRK09952 shikimate transporter; Provisional
Probab=99.40 E-value=3e-11 Score=108.37 Aligned_cols=163 Identities=12% Similarity=0.114 Sum_probs=106.4
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.|....+.|.+ ++++|.+.++...+.........+ .+..|+++||+|||+++..+.+...++...+..... .. .+
T Consensus 266 ~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~--~~-~~ 342 (438)
T PRK09952 266 MYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE--AQ-SI 342 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH--cC-Ch
Confidence 34444556665 677899987765555444444455 788999999999999998887665554433322211 11 12
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhh-hhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGY-VGLSTAIFTDICTALFSS--KPSAFLLILAIVPA 183 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~-~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~ 183 (263)
.+.++...++.+++.+...+...+.+.|.+| +.|+++.|+.... ..+++.++|.+.+.+.+. +.+...+.+.....
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 422 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGC 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 3334445566677777777778889999999 6799999986544 447888999999988763 33444444444455
Q ss_pred HHHHHHHhhccc
Q 045446 184 VICLTAVLFLHE 195 (263)
Q Consensus 184 ~~~~~~~~~~~~ 195 (263)
+++.+.....++
T Consensus 423 ~i~~v~~~~~~~ 434 (438)
T PRK09952 423 LISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHccc
Confidence 555555555543
No 98
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.40 E-value=2.6e-11 Score=107.53 Aligned_cols=162 Identities=12% Similarity=0.081 Sum_probs=107.6
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHH-HHHHHHHHHHHHHHHHHhccCCCc
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILI-IGSLEGLIGYGVQWLVVSEKIHPL 106 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~-~g~~~~~~g~~~~~~~~~~~~~~~ 106 (263)
..+.+..+.|.+.+++|.|..+.+++.....++..+ .+..|+++||+|||+... .+.+...++...+........ .
T Consensus 237 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~ 314 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFG--H 314 (402)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccC--C
Confidence 345566778888888999999988876666777777 899999999999988764 333333333322211111111 1
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVI 185 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~ 185 (263)
+.+...++.++.|++.+...+ ......+..|++||++.|+.+....+++.++|.+.+.+.+. ++...+...+ ...++
T Consensus 315 ~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a-~~~~i 392 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFA-ALYVV 392 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHH
Confidence 345555667777777766543 44556677778899999999999999999999999998876 4444444444 33444
Q ss_pred HHHHHhhcc
Q 045446 186 CLTAVLFLH 194 (263)
Q Consensus 186 ~~~~~~~~~ 194 (263)
+.....++|
T Consensus 393 ~~~~~~~~~ 401 (402)
T TIGR00897 393 SAFLTAFIR 401 (402)
T ss_pred HHHHHHHhc
Confidence 444444544
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.39 E-value=2.4e-12 Score=117.88 Aligned_cols=147 Identities=16% Similarity=0.140 Sum_probs=119.1
Q ss_pred HHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhh
Q 045446 42 SLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGN 120 (263)
Q Consensus 42 ~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 120 (263)
+.++.+........+.+.+|..+ .++.|.++||+|||++++.+.++..++.+ .++.++ +++.+++.|+++|+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~-----~~a~a~--~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGI-----LTAFAP--NYWMFLIFRFLSGF 183 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHH-----HHHHhC--cHHHHHHHHHHHHh
Confidence 56778888888888999999999 78999999999999999999999988887 666665 56889999999999
Q ss_pred chhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045446 121 STTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 121 g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
+.+........+++|.++ ++|+.+..+ ......++...++..+++.. .|++.++....+....++..++.+|.|+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~r 259 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPR 259 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChH
Confidence 999999999999999997 779999999 66666888888888888876 4666666555555544444444435443
No 100
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.39 E-value=1.6e-12 Score=113.14 Aligned_cols=181 Identities=15% Similarity=0.095 Sum_probs=129.6
Q ss_pred HHHHHHHHhhCCcccchhchHHHHHHc--------CCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 18 VTAIWVQATCGNNYTFSNYSDALKSLM--------ALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~p~l~~~~--------~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
++++....-....+..+...|-+...+ |++....+.+....++|.++ +++.|++.||+|||+++....++.
T Consensus 45 iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liIm 124 (538)
T KOG0252|consen 45 IAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIM 124 (538)
T ss_pred HhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHH
Confidence 344443333344555666666664432 25566777799999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 89 LIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.++++...+..+..+++.-++.++.+|++.|+|.|.=||.+.++.+|.-- ++||+-.+...+.++.|...+..+.-.+.
T Consensus 125 Ii~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 125 IICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred HHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 99998222211111222236778889999999999999999999999776 56999999998888877766655444332
Q ss_pred ---CC------------ChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045446 168 ---SS------------KPSAFLLILAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 168 ---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
+. ..|+..+.++.++.+..+..-..++|.++
T Consensus 205 ~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~ 250 (538)
T KOG0252|consen 205 AIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETAR 250 (538)
T ss_pred HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchh
Confidence 21 35888888888887776666555565443
No 101
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1.4e-11 Score=107.51 Aligned_cols=150 Identities=12% Similarity=0.119 Sum_probs=106.4
Q ss_pred hHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 37 SDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 37 ~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
.|. +++++|.++++.+++.......... .++.|++.||+|||+++..+.+...+..... ...+ +.+.+...
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~ 294 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL-----AADN--SLWALLML 294 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH-----HHHH--HHHHHHHH
Confidence 344 4678999999998865554444444 7889999999999999888766544443321 1112 34556667
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhc
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFL 193 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (263)
+.++|++.+...+.......|.+|++|++++|+.+....+|..++|.+.+.+.+...++..+.......+++.+...++
T Consensus 295 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 295 QLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 8888888888888888888899998888999999988889999999999988776334444444444444444444443
No 102
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.38 E-value=8.5e-12 Score=111.20 Aligned_cols=147 Identities=12% Similarity=0.092 Sum_probs=105.6
Q ss_pred cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhch
Q 045446 44 MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNST 122 (263)
Q Consensus 44 ~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~ 122 (263)
.+.+..+.+.+.....+...+ .++.|++.||+|+|+.+..+.++..++.+. .+..+ +.+.++..+.+.|++.
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l-----~~~~~--~~~~~~~~~~l~g~~~ 329 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG-----SGFAT--GPLEVSILKLLHAFEV 329 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH-----HHhcc--cHHHHHHHHHHHHHHH
Confidence 466777788877776676666 889999999999999999888887777763 33333 3466777788899888
Q ss_pred hhhhhhHHHHHhhhcC-CCCCchHHH-HHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 045446 123 TWMNTAVLVTCMRNFP-KNRGPVSGI-LKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 123 ~~~~~~~~~~~~~~fp-~~rg~~~gi-~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
+...+.....+.+.+| +.|++..+. .+...++|..+++.+.+.+.+. ++...+...+....+..++.....++++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 330 PFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8777777788889898 558877655 4566779999999999998876 4444444445544444444444444433
No 103
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.38 E-value=1.2e-11 Score=116.77 Aligned_cols=132 Identities=15% Similarity=0.077 Sum_probs=95.3
Q ss_pred HHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHH
Q 045446 55 SVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTC 133 (263)
Q Consensus 55 ~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~ 133 (263)
.....++... .++.|+++||+|||+++..+.++.+++.+.+. ..++ .+.+++.+++.|++.+...+...+++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~-----~~~s--~~~ll~~~~l~g~~~~~~~~~~~a~~ 673 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS-----FGNS--ESAMIALLCLFGGLSIAAWNALDVLT 673 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-----HHcc--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566 78999999999999999999888888777433 2332 24455667777777777788888999
Q ss_pred hhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhcc
Q 045446 134 MRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLH 194 (263)
Q Consensus 134 ~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
.|++| ++|++++|+......+|++++|.+++.+..... ...+++.....+++.+...+++
T Consensus 674 aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~-~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 674 VELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITK-AAPILFASAALACGGLLALKLP 734 (742)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHhCC
Confidence 99999 679999999999999999999999987765432 3333333334344444444443
No 104
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=3e-11 Score=107.52 Aligned_cols=156 Identities=17% Similarity=0.155 Sum_probs=114.8
Q ss_pred chhchHHHHHH-cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDALKSL-MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l~~~-~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
+..+.|.+.++ +|.+..+.+++.....++..+ .++.|++.||.++++.+..+.+...++.+. ....+ +.+.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~--~~~~ 314 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGL-----FGLMP--MWIL 314 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHH-----HHccc--hHHH
Confidence 34455776555 899999999987777788777 889999999988888888887776666652 23333 3355
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLT 188 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~ 188 (263)
..+..++.|++.+...+...+.+.|.+| ++||++.|+......+|..+++.+.+.+.+. +....+...+....+++.+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 5666777888887776777788889999 5699999999998889999999999988876 4444555555555555555
Q ss_pred HHhhccc
Q 045446 189 AVLFLHE 195 (263)
Q Consensus 189 ~~~~~~~ 195 (263)
.....++
T Consensus 395 ~~~~~~~ 401 (417)
T PRK10489 395 LLLVLGE 401 (417)
T ss_pred HHHhccc
Confidence 5554444
No 105
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=2.2e-11 Score=104.73 Aligned_cols=152 Identities=20% Similarity=0.247 Sum_probs=119.5
Q ss_pred ccchhchHHHHHH-cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHH-HHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 31 YTFSNYSDALKSL-MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSA-ILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 31 ~~~~~~~p~l~~~-~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~-~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
..+..+.|.+.++ +|.++.+.++......++..+ .++.|++.||+|||+ .+..+.....++.... ...+ +
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~--~ 264 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL-----ALAP--S 264 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-----HHhc--c
Confidence 3444556666544 599999999988888888887 899999999999999 9999888888887733 2222 2
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVIC 186 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 186 (263)
.+...+...+.|++.+...+.......|..| ++|++.+|+.+....++..+++.+.+.+.++..++..+.......+++
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLA 344 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 4667778899999999999999999999999 779999999999999999999999999987644444444444444444
Q ss_pred HHH
Q 045446 187 LTA 189 (263)
Q Consensus 187 ~~~ 189 (263)
.+.
T Consensus 345 ~i~ 347 (352)
T cd06174 345 ALL 347 (352)
T ss_pred HHH
Confidence 443
No 106
>PRK03545 putative arabinose transporter; Provisional
Probab=99.36 E-value=4e-11 Score=105.81 Aligned_cols=150 Identities=11% Similarity=0.096 Sum_probs=103.7
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 045446 38 DALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLC 116 (263)
Q Consensus 38 p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (263)
|.+++++|.|+.+.+++.....++... .++.|++.||+|+|+.. .+......+.... ....+ +.+.+++..+
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l----~~~~~--~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLL----LPAAN--SEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHH----HHHhc--hHHHHHHHHH
Confidence 445667899999999987777777777 88999999999988654 4444433333321 11122 3455666777
Q ss_pred HHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhcc
Q 045446 117 MGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLH 194 (263)
Q Consensus 117 l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
+.|++.+...+.....+.+..|++|++++|+......+|..+++.+.+.+.+....+..+.......+++.+......
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 788877666666667777888888999999999888899999999999998874344444444444444444444333
No 107
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.35 E-value=2.9e-11 Score=108.38 Aligned_cols=139 Identities=14% Similarity=0.028 Sum_probs=95.9
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC----
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP---- 105 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~---- 105 (263)
.....+.|.+.+++|.+..+.++......++..+ .++.|++.||+|||+.+..+.++..++...+........++
T Consensus 301 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 301 NAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKS 380 (481)
T ss_pred eehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence 3445667888888999998888877777777666 88999999999999999998877777766443221111111
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.+...+....+..+.......+.....+.|.+| ++|++++|+......+|+.+++.+.+.+.++
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 011222222222221112223445566789999 6799999999999999999999999988775
No 108
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.35 E-value=6.6e-11 Score=105.95 Aligned_cols=163 Identities=13% Similarity=0.085 Sum_probs=93.5
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.|.+..+.|.+ ++++|.+.++.+...+.......+ +++.|+++||+|||+....+.+...+...++.... ...++ .
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~-~ 336 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL-QNVSS-P 336 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-HcCCc-H
Confidence 45556667775 567899998888855555555445 88899999999999988777665433333222111 11111 1
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhh-HHHHHHHHHHHhhCCChhHHHHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGL-STAIFTDICTALFSSKPSAFLLILAIVPAVI 185 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~l-g~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 185 (263)
+.......+.+.+.+...+.......|.|| +.|++++|+.+..... .+...|.+.+.+.+.+.+...++......++
T Consensus 337 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i 415 (432)
T PRK10406 337 -YAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVV 415 (432)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 211111222222333333455677889999 6799999999866544 2334555555332224344444444444455
Q ss_pred HHHHHhhccc
Q 045446 186 CLTAVLFLHE 195 (263)
Q Consensus 186 ~~~~~~~~~~ 195 (263)
+.+..++.++
T Consensus 416 ~~~~~~~l~~ 425 (432)
T PRK10406 416 AFLVSLMLHR 425 (432)
T ss_pred HHHHHHHhhh
Confidence 5555555443
No 109
>PRK03699 putative transporter; Provisional
Probab=99.35 E-value=2.7e-11 Score=107.13 Aligned_cols=146 Identities=9% Similarity=-0.025 Sum_probs=104.5
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.+.+..+.|.+ ++++|+|.++.+++.....++..+ .+..|++.||+++|+.+..+.....+....+ ...++
T Consensus 221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~-----~~~~~-- 293 (394)
T PRK03699 221 QLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF-----VNTDD-- 293 (394)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH-----HHcCC--
Confidence 34455667776 577899999999977777777777 8899999999999999887776655544322 12222
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVP 182 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~ 182 (263)
.+.+.+..++.|++.+..++...+...+..|+++++..|.......+|+.++|.+.+.+.+. +....++..+...
T Consensus 294 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~ 369 (394)
T PRK03699 294 PSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLY 369 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHH
Confidence 23344556677777777777777777777787788889999888889999999999988876 4443333334333
No 110
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.35 E-value=9.7e-11 Score=104.74 Aligned_cols=157 Identities=18% Similarity=0.198 Sum_probs=121.2
Q ss_pred HHHHHcC--CCHHHHH--H--HHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 39 ALKSLMA--LTQLQLN--N--LSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 39 ~l~~~~~--~s~~~~~--~--i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
++.+.++ .|+++.. | +.....+|..+ ....|+++||+|||..+.+..++...+..++..... .+ .++.+
T Consensus 44 t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~--~~--~~e~l 119 (485)
T KOG0569|consen 44 TLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS--AP--SFEML 119 (485)
T ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--hh--hHHHH
Confidence 3444566 4554433 3 55667778888 789999999999999999999988888876654432 22 46889
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH-HhhCC-ChhHHHHHHHHHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT-ALFSS-KPSAFLLILAIVPAVICLT 188 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~-~l~~~-~~~~~~~~~~~~~~~~~~~ 188 (263)
+++|++.|+..|.......-.+.|.-| +.||......+.+..+|..++..++. .++.+ ..|.+.+....++.++.++
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 56999999998888888888756554 33333 5677777777788888888
Q ss_pred HHhhcccCCCC
Q 045446 189 AVLFLHENQPA 199 (263)
Q Consensus 189 ~~~~~~~~~~~ 199 (263)
...+++|.|+.
T Consensus 200 ~l~~~PESPk~ 210 (485)
T KOG0569|consen 200 LLPFLPESPKY 210 (485)
T ss_pred HHhcCCCCcch
Confidence 88888887763
No 111
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.34 E-value=2.2e-11 Score=107.69 Aligned_cols=155 Identities=19% Similarity=0.201 Sum_probs=107.1
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
.+.|.+.++.|.+ +.++......++... .++.|++.||+|+|+.+..+.....++...+. ..+ +.+.+++
T Consensus 237 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~ 307 (399)
T PRK05122 237 TFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW-----LAP--SPWMALI 307 (399)
T ss_pred HHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-----Hhc--cHHHHHH
Confidence 4445554555653 334444455555555 78999999999999999888877777765332 222 3355666
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhh
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLF 192 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
..++.|++.+..++.......|.+| ++||++.|+.+....+|..+++++.+.+.+...++..+.......+++++....
T Consensus 308 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 308 GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999998888877777788888 679999999999999999999999888876533444444444444455555555
Q ss_pred cccCCC
Q 045446 193 LHENQP 198 (263)
Q Consensus 193 ~~~~~~ 198 (263)
.+++++
T Consensus 388 ~~~~~~ 393 (399)
T PRK05122 388 LYRRAP 393 (399)
T ss_pred hccccc
Confidence 544443
No 112
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=5.4e-11 Score=107.50 Aligned_cols=133 Identities=12% Similarity=0.096 Sum_probs=101.2
Q ss_pred chhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
...+.|.+ +..+|.++.+.++......++... .++.|++.||+|+|+++..+.....++...+... . .+.+.+.
T Consensus 280 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~ 355 (471)
T PRK10504 280 LPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV--A--LLGWYYL 355 (471)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc--c--ccccHHH
Confidence 33455665 446899999999877777777766 6899999999999999998888777665533221 1 1122333
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+.+..++.|++.+..++.......+.+| ++||++.|+.+....+|..+++.+.+.+.+.
T Consensus 356 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 356 LPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445667788888888888888889998 6799999999999999999999988877653
No 113
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.34 E-value=2.2e-11 Score=106.57 Aligned_cols=137 Identities=13% Similarity=0.013 Sum_probs=98.8
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.+....+.|.+ ++++|.++++.+.......++..+ .++.|++.||+|||+.+..+.....+........... +.+
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 311 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD---SGS 311 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc---CCc
Confidence 34455566765 577899999998877777777776 8999999999999998876655444333222111111 113
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHH-HhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGIL-KGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~-~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.+......++.|++.+...+...+.+.|.+| ++|+++.|+. +....+|+.++|.+.+.+.+.
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 3555566778888888888889999999999 5699999985 444557888999999988876
No 114
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.33 E-value=1.7e-10 Score=102.33 Aligned_cols=153 Identities=12% Similarity=0.079 Sum_probs=108.1
Q ss_pred cchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 32 TFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 32 ~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
.+..+.|.+ ++++|.++.+.++.......+..+ .+..|++.||+|+|+....+.+...++........... +.+.+
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~ 310 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS--SHAYL 310 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHH
Confidence 344445654 677999999988866666666666 78999999999999999998887777766543322111 12345
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVIC 186 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 186 (263)
.+.+..++.|+|.+...+..........|++||++.+..+....++..+++.+.+.+.+...+......+....++.
T Consensus 311 ~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 311 WLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 56667788888888877666555544445789999999999999999999999998877644444444444343333
No 115
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.33 E-value=5.1e-11 Score=106.15 Aligned_cols=134 Identities=18% Similarity=0.155 Sum_probs=91.1
Q ss_pred CcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
..+....+.|.+.++.|.+.++.+.......++..+ .++.|++.||+|||+....+.+...+....... ... .+
T Consensus 246 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~ 320 (426)
T PRK12307 246 ANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFR----IPQ-DN 320 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH----Hcc-cc
Confidence 333445566777777899998888876666677766 899999999999999998887766555442221 111 11
Q ss_pred HHHHHHHHHHHhh--chhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGN--STTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~--g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
...+ ...+.|. +.....+.....+.|.+| ++||+++|+......+++.++|.+.+.+.+.
T Consensus 321 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 321 YLLL--GACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHH--HHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 1211 1122222 112223344566789999 6799999999988899999999999988765
No 116
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=8.9e-11 Score=103.42 Aligned_cols=143 Identities=10% Similarity=0.121 Sum_probs=112.1
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
...+..+.|.+.++.|.++++.+.......+.... .+..|++.||+|+|+++..+.+...+... ..+..+ +.
T Consensus 221 ~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~-----~~~~~~--~~ 293 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWA-----IIGAIE--AF 293 (382)
T ss_pred HHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHH-----HHHhHh--hH
Confidence 33344455666667999999999876666777666 78999999999999999999998888877 333333 44
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHH-hhhhhHHHHHHHHHHHhhCCChhHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILK-GYVGLSTAIFTDICTALFSSKPSAFLLILAI 180 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~-~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~ 180 (263)
+.++..+.++|+..+...+.....+.+. | ++|++..++.+ ...++|..+++.+++.+.+......++..+.
T Consensus 294 ~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~ 366 (382)
T TIGR00902 294 PLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAI 366 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 7778889999999999999999999988 8 67999999976 5678999999999999987743343444443
No 117
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.31 E-value=5.6e-11 Score=107.49 Aligned_cols=131 Identities=12% Similarity=0.014 Sum_probs=92.7
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
..+.|.+.++.|.+..+..+......+...+ .++.|++.||+|||+++..+.+..+++.+.+...... +... ....
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~--~~~~-~~~~ 367 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT--QAPG-IVAL 367 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc--Cccc-HHHH
Confidence 3456888888999887777766666666666 8999999999999999999999888887765433221 1111 1222
Q ss_pred HHHHHHhhchhhh-hhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 113 IFLCMGGNSTTWM-NTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 113 ~~~~l~g~g~~~~-~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
...++.+.+.+.. .+.....+.|.+| ++|++++|+......++..+++.+.+.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 2333344344332 3556788899999 67999999999988888888876665443
No 118
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.31 E-value=3e-09 Score=90.59 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=122.3
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
....+...+++++++|.|.++.+.+++.-.+.... .++..+++.|+|.++.+..+.++.++|.. +-... +.
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~-----iR~~~---~~ 99 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL-----IRSLG---GL 99 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH-----HHhcc---cH
Confidence 44567788999999999999999987777666655 99999999999999999999999999988 54433 23
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLILAIVPAVI 185 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~ 185 (263)
+.++..-.+.|.|.+..+......+-|.||||-+..+|+.....+.++++++.+.-.+.++ +|+....+.+.+..+.
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allA 178 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLA 178 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHH
Confidence 6677788888999999999999999999999999999999999999888888877766655 4666677777655443
No 119
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.30 E-value=1.3e-10 Score=102.88 Aligned_cols=155 Identities=11% Similarity=0.008 Sum_probs=107.1
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
+....+.|.+.+++|.+..+.+.......++..+ .+..|++.||+|||+....+..+..++...+.. ..++ . .
T Consensus 222 ~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~----~~~~-~-~ 295 (393)
T PRK09705 222 ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW----LPLQ-L-P 295 (393)
T ss_pred HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH----ccch-H-H
Confidence 3455566777667899999999987888888777 899999999999999998887776666553211 1111 1 2
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVIC 186 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~ 186 (263)
.+. ..+.|++.+...+.......+.++ ++||+..|+.+....+++.++|.+.+.+.+. +.+...+.+.....++.
T Consensus 296 ~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (393)
T PRK09705 296 VLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGL 373 (393)
T ss_pred HHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 222 234577777777777666667764 4689999999999999999999999988876 33444444443333444
Q ss_pred HHHHhhc
Q 045446 187 LTAVLFL 193 (263)
Q Consensus 187 ~~~~~~~ 193 (263)
.......
T Consensus 374 ~~~~~~~ 380 (393)
T PRK09705 374 MIITLRF 380 (393)
T ss_pred HHHHHHh
Confidence 4443333
No 120
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=3.5e-10 Score=98.48 Aligned_cols=160 Identities=13% Similarity=0.046 Sum_probs=115.9
Q ss_pred hCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 27 CGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 27 ~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
.+.+-.|....|.+++..|+|.++.+++...+.++..+ ...+|+++|| ++|+.+.....+..+....+... + +
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~--~---~ 298 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT--G---A 298 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHh--c---c
Confidence 34444455566888999999999999999999999988 8999999999 88988888877766666543222 1 1
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVI 185 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 185 (263)
+.+.....-++.|++.+.....-..-..+..||++..+.+++.+.+++|.+++..+++..+++.......+.+....+.
T Consensus 299 -~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~ 377 (394)
T COG2814 299 -SPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLL 377 (394)
T ss_pred -hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Confidence 2244444555566655555445555566655788999999999999999999999999999884445555555555555
Q ss_pred HHHHHhhc
Q 045446 186 CLTAVLFL 193 (263)
Q Consensus 186 ~~~~~~~~ 193 (263)
++......
T Consensus 378 a~~~~~~~ 385 (394)
T COG2814 378 ALLLALLS 385 (394)
T ss_pred HHHHHHHH
Confidence 55555443
No 121
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.29 E-value=9.1e-11 Score=103.78 Aligned_cols=132 Identities=11% Similarity=0.047 Sum_probs=94.5
Q ss_pred HHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHH
Q 045446 53 NLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLV 131 (263)
Q Consensus 53 ~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~ 131 (263)
.+.....++..+ .+..|++.||+|||+.+..+.....++.+.. ...+ +.+.+++.+++.|++.+...+....
T Consensus 262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (408)
T PRK09874 262 MIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPM-----SFVQ--TPLQLGILRFLLGAADGALLPAVQT 334 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH-----HHhc--cHHHHHHHHHHHHhhhHhhHHHHHH
Confidence 333444455555 7889999999999999998887766655522 2222 3466777788899999988888888
Q ss_pred HHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHh
Q 045446 132 TCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 132 ~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
.+.+..| ++||+..|+......+|..++|.+.+.+.+...++..+.......+++.+...
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 335 LLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 8888888 67999999999999999999999999888763344444444433344444333
No 122
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.29 E-value=6.8e-10 Score=101.34 Aligned_cols=159 Identities=15% Similarity=0.138 Sum_probs=120.6
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
+..+-+..+..-|+...+.+.....+-..+ ++++|.++||++|||+++.+-+..++....+.... .....+.|.+++
T Consensus 31 va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~--~~~~~~~~~Ll~ 108 (524)
T PF05977_consen 31 VALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLA--FFGLLSPWLLLI 108 (524)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHH--HhCcCCHHHHHH
Confidence 334556666778888888888888888876 99999999999999999999887665544443222 122335688888
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhh
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLF 192 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
.-++.|++.+...|+-.+.+.+..| ++..+++++.....+++..++|.+++.++........+.++.+..++.+.....
T Consensus 109 ~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~ 188 (524)
T PF05977_consen 109 LTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLR 188 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999 567899999999999999999999998886533344555555554555545455
Q ss_pred ccc
Q 045446 193 LHE 195 (263)
Q Consensus 193 ~~~ 195 (263)
.++
T Consensus 189 ~~~ 191 (524)
T PF05977_consen 189 WKP 191 (524)
T ss_pred ccc
Confidence 544
No 123
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=1.9e-11 Score=104.25 Aligned_cols=112 Identities=14% Similarity=0.067 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhh
Q 045446 49 LQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNT 127 (263)
Q Consensus 49 ~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~ 127 (263)
.-.+.+.+.+.+...+ ++..|.++||+|||+++.++++..++.+. +.+.+. ++..+.+.|++.|+.-|-. .
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~l-----l~~~S~--~F~afv~aR~l~Gi~kgnl-~ 139 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYL-----LWALSR--NFAAFVLARFLGGIFKGNL-S 139 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHH-----HHHHHH--HHHHHHHHHHhhhhccCch-H
Confidence 3456688888888888 99999999999999999999998888666 444443 4444555699999988765 5
Q ss_pred hHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 128 AVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 128 ~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
...++++|.++ |+|+++++......++|-.+||.+++++..
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 67788899998 679999999999999999999999998876
No 124
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=3.5e-10 Score=102.98 Aligned_cols=157 Identities=11% Similarity=0.093 Sum_probs=107.7
Q ss_pred hHHHHHHcCCCHHHHHHHH-HHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 37 SDALKSLMALTQLQLNNLS-VAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~-~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
.|.+.+++|+|.++.++.. ....++..+ .+.+|++.||+|+|+.+.++.+...++...++.. .... .+.+.+...
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l--~~~~-~~~~~l~~~ 322 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLL--SITD-KNLYSMGAA 322 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--Hhcc-ccHHHHHHH
Confidence 3555678999999999975 455566666 8999999999999998877666555544333221 1111 133444444
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcCC-CCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhc
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFPK-NRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFL 193 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp~-~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (263)
.+++.+..+...+...+...+..|+ .+++..|+.+...++|..+++++.+.+.+...+...+.+.....+.+++.....
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555566677788888884 589999999999999999999999988876445555555555555566665555
Q ss_pred ccC
Q 045446 194 HEN 196 (263)
Q Consensus 194 ~~~ 196 (263)
|++
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 543
No 125
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=2.7e-10 Score=102.10 Aligned_cols=137 Identities=15% Similarity=0.097 Sum_probs=90.2
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.+....+.|.+ ++.+|.++.+.++......++..+ .+..|+++||+|||+.+..+.+...+...+..... ...+ +
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~--~ 330 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWL-VAAP--S 330 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-HcCC--c
Confidence 34455667776 555899999988887777777766 88999999999999998876554332221111111 1111 2
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhh-hHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVG-LSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~-lg~~i~~~l~~~l~~~ 169 (263)
.........+.+++.+...+.......|.+| ++|+++.|+...... +++.++|.+.+.+.+.
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 2333333444455566655666678889999 679999998654433 4577788888877765
No 126
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.27 E-value=1.7e-09 Score=95.68 Aligned_cols=148 Identities=16% Similarity=0.065 Sum_probs=115.9
Q ss_pred cCCCHHHHHH-HHHHHHHhhhhhhHHHhhhccc-ChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhc
Q 045446 44 MALTQLQLNN-LSVAKDVGKAFGLLSGLASDRL-PTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNS 121 (263)
Q Consensus 44 ~~~s~~~~~~-i~~~~~~~~~~~~~~G~l~Dr~-G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g 121 (263)
+|+|++++.- .+.+..+.+...+++||++||+ |+|++...|.++..+|.+.+. .++......+++...+.++|
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~-----~~~~~~~~gl~i~L~~I~iG 130 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLA-----ISSVSGPGGLYIGLALIIVG 130 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh-----ccccccccHHHHHHHHHHhc
Confidence 4499999887 4555555555589999999996 999999999999999999543 22101224577777788899
Q ss_pred hhhhhhhHHHHHhhhcC-CC--CCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhcccC
Q 045446 122 TTWMNTAVLVTCMRNFP-KN--RGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 122 ~~~~~~~~~~~~~~~fp-~~--rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
.|.+-+...+.+.|.+| ++ |-...++.....++|+.+.|.+.+.+-++..|+.-+-.+.+-...+++.....|++
T Consensus 131 ~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 131 TGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred cccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 99999999999999998 33 56677777778889999999999998888667777777777777788777776643
No 127
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.26 E-value=4.3e-11 Score=107.97 Aligned_cols=152 Identities=20% Similarity=0.156 Sum_probs=121.2
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 045446 40 LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMG 118 (263)
Q Consensus 40 l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (263)
+++|.+...++.+++.+.+.+++++ .+++|.|.||++..+.+....+...+-.+ ++... .+++.+++.|++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~-----~~~~~--~s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGF-----LTAAV--HSFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHH-----HHHHH--hhhHHHHHHHHHH
Confidence 4688999999999999999999998 89999999999977777665555443333 21112 2568899999999
Q ss_pred hhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC------C-ChhHHHHHHHHHHHHHHHHHH
Q 045446 119 GNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS------S-KPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 119 g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~------~-~~~~~~~~~~~~~~~~~~~~~ 190 (263)
|+.++..+|....++..||. ++||+.+|+..+..++|+++++.+...+.+ . +|++.+.+.+++..+.+++..
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 99999999999999999998 689999999999999999999999988642 1 455555555666666777777
Q ss_pred hhcccCCC
Q 045446 191 LFLHENQP 198 (263)
Q Consensus 191 ~~~~~~~~ 198 (263)
+++++.|+
T Consensus 225 ~~lp~~P~ 232 (495)
T KOG2533|consen 225 FFLPDNPS 232 (495)
T ss_pred EEecCChh
Confidence 77776555
No 128
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.26 E-value=5.8e-11 Score=102.69 Aligned_cols=172 Identities=17% Similarity=0.104 Sum_probs=116.2
Q ss_pred HHHHhhCCcccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHH
Q 045446 22 WVQATCGNNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVV 99 (263)
Q Consensus 22 ~~~~~~~~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~ 99 (263)
......|..-.++.+.|.+ +++|+.+..+.+.+.........+ -+.+|+|+||+|.+|+........+++........
T Consensus 226 lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 226 LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccc
Confidence 3344456666777777775 888999999999876666666555 99999999999999999998888888877554333
Q ss_pred hccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHH
Q 045446 100 SEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLIL 178 (263)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~ 178 (263)
.+.....+.+......+..++..|......+..+...||++-|.+.|+..+..++|+...|...+...+. +.+...++.
T Consensus 306 ~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~ 385 (417)
T COG2223 306 TGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFML 385 (417)
T ss_pred cccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHH
Confidence 2221112223333333334444455555678888999999999999999999999998888888877765 433333333
Q ss_pred HHHHHHHHHHHHhhc
Q 045446 179 AIVPAVICLTAVLFL 193 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~ 193 (263)
-....+++.+..+..
T Consensus 386 ~~~~~~~a~v~~~~~ 400 (417)
T COG2223 386 LLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333334444444333
No 129
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.26 E-value=9.2e-14 Score=124.76 Aligned_cols=145 Identities=21% Similarity=0.229 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCc-hHHHHHHHHHHHhhchhhhh
Q 045446 49 LQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPL-PYWQMCIFLCMGGNSTTWMN 126 (263)
Q Consensus 49 ~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~g~~~~~ 126 (263)
.+.++......++..+ .++.|+++||+|||+.+..+..+..++.+ ..+.+++. +++.+++.|+++|++.|...
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSI-----LIAFAPSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccc
Confidence 4566788888899888 89999999999999999999999999998 66665511 45788889999999999999
Q ss_pred hhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC---ChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045446 127 TAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS---KPSAFLLILAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 127 ~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
+....++.|..| ++||+..++.+....+|..++..+....... ..|+..+.....+.++.++...+++|.|+
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~ 196 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPR 196 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999998 6799999999988888877766554433221 34777776666666555666666776543
No 130
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.25 E-value=2e-10 Score=103.57 Aligned_cols=134 Identities=10% Similarity=0.010 Sum_probs=98.7
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc--cChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR--LPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr--~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
+....+.|.+.++.|.++.+.+++.....++..+ .++.|+++|| +++|+....+......+...+ .....+ +
T Consensus 258 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l---l~~~~~--~ 332 (455)
T TIGR00892 258 FAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL---LCALAG--D 332 (455)
T ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH---HHHHhc--h
Confidence 3334556777677899999999977777777766 8999999998 445544444433332222211 222222 3
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.+.+++.+++.|++.+...+...+.+.|.+| ++||+++|+.+...++|..++|.+.+.+.+.
T Consensus 333 ~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 333 YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 4667778899999998888888899999998 6799999999999999999999999988765
No 131
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.24 E-value=4.1e-10 Score=99.12 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=101.2
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
.+.|.+.++.|.+.++.+++.....++..+ .++.|++.||+|+|+++..+.....++..... +. +....
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-------~~---~~~~~ 290 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-------SQ---AAMAP 290 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-------hh---HHHHH
Confidence 346777777899999988866676677766 88999999999999999888777766655221 11 12223
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHH
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICL 187 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (263)
...+.|.+.....+.......|..| ++++.+.+..+...++|+.++|.+.+.+.+...+...+.......++..
T Consensus 291 ~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 291 ALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHH
Confidence 4555666666667888888888888 5677788888888889999999999998876334444444333333333
No 132
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.24 E-value=1.1e-10 Score=105.66 Aligned_cols=134 Identities=12% Similarity=0.142 Sum_probs=107.1
Q ss_pred chhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
...+.|.+ ++.+|.|+.+.++......++..+ .++.|++.||+|||+.+..+.....++...+.. ...++.+.+.
T Consensus 274 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ 350 (485)
T TIGR00711 274 SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF---TFTPDTPFLA 350 (485)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc---cCCCCCCHHH
Confidence 33455665 566899999999988888888777 899999999999999999998888777764321 1222334566
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+.....+.|+|.+...++......+..| ++||++.|+.+....+|+.+++.+.+.+.++
T Consensus 351 ~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 351 IALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667888999999888777777778888 7799999999999999999999999988765
No 133
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.23 E-value=9.9e-10 Score=96.19 Aligned_cols=133 Identities=12% Similarity=0.147 Sum_probs=97.8
Q ss_pred cchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 32 TFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 32 ~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
.+..+.|.+ ++++|.++++.+++.....++..+ .++.|++.||+|+|+....+.....++...+..... ....+.+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 301 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAI--LGLGSWA 301 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH--hccchHH
Confidence 344455654 668999999999987777777777 899999999999999998888777776654433211 1111233
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
.+.....+.|++.+...+.......|.+|++||++.++.+.....++.+.+++.+..
T Consensus 302 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 302 MIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444456778888888888888888888898899999999877766666666666633
No 134
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.23 E-value=3.6e-10 Score=98.58 Aligned_cols=153 Identities=14% Similarity=0.085 Sum_probs=97.1
Q ss_pred ccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHH-HHHHHHHHHHHHHH--HHhccCCC
Q 045446 31 YTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILII-GSLEGLIGYGVQWL--VVSEKIHP 105 (263)
Q Consensus 31 ~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~-g~~~~~~g~~~~~~--~~~~~~~~ 105 (263)
+.+..+.|.+ ++++|.|+.+.+++.....++..+ .+..|++.||+|||+.... ......++...... ...+..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 310 (399)
T TIGR00893 232 GFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN- 310 (399)
T ss_pred HHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch-
Confidence 3444555654 677899999999987777777777 8999999999999961111 11111111111100 0112111
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPA 183 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~ 183 (263)
+.+.......+.+.+.+ ..+.......|.+| ++||++.|+.+...++|..++|.+.+.+.+. +.+...+.......
T Consensus 311 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~ 388 (399)
T TIGR00893 311 -IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALA 388 (399)
T ss_pred -hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHH
Confidence 22333333444444444 67888889999999 6799999999999999999999999998876 32444444433333
Q ss_pred HHH
Q 045446 184 VIC 186 (263)
Q Consensus 184 ~~~ 186 (263)
+++
T Consensus 389 ~~~ 391 (399)
T TIGR00893 389 LIG 391 (399)
T ss_pred HHH
Confidence 333
No 135
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.22 E-value=1.6e-10 Score=105.39 Aligned_cols=134 Identities=17% Similarity=0.154 Sum_probs=107.4
Q ss_pred cchhchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 32 TFSNYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 32 ~~~~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
....+.|. +++.+|.|+.+.+.......++..+ .++.|++.||+|+|+.+..|.++..++...+... ... .+.+
T Consensus 277 ~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~~--~~~~ 352 (495)
T PRK14995 277 GFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DFS--TQQW 352 (495)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cCC--CchH
Confidence 33445555 5777999999999988888888877 8999999999999999998888877777644322 222 2335
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
......++.|+|.+...++......+..| +++|.+.++.+....+|+.+++.+.+.+.++
T Consensus 353 ~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 353 QAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667888999999988888888888888 6799999999999999999999999888753
No 136
>PRK11043 putative transporter; Provisional
Probab=99.21 E-value=1.8e-09 Score=95.57 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=99.3
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+..+.|.+.+++|.|+.+.++......++..+ ....+++.||+|+|+....+.+...++...++.......+ +.+.
T Consensus 221 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 298 (401)
T PRK11043 221 AWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHP--SLVP 298 (401)
T ss_pred HHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccC--cHHH
Confidence 344556777778999999999866666666666 7888999999999998776666555554433322211111 2344
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
......+.|.+.+..++.......+.+|++||++.|+.+.....++..++.+.+.+.+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 299 LLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 44556677888888888888877788898899999999988878888888888888764
No 137
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.21 E-value=2.3e-10 Score=103.02 Aligned_cols=157 Identities=12% Similarity=0.025 Sum_probs=90.6
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc--ChHHHH-HHHHHHHHHHHHHHHHHHhccCC
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL--PTSAIL-IIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
.+....+.|.+ +++.|++.++.++......++..+ .++.|+++||+ |||+.. .....+..++...++ .....
T Consensus 269 ~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~---~~~~~ 345 (452)
T PRK11273 269 RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW---LNPAG 345 (452)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHH---Hhccc
Confidence 34555677776 556899999998877777777776 88999999999 555432 222223333332221 11111
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHH-HHHHHHHhhCCChhHHHHHHHHHH
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAI-FTDICTALFSSKPSAFLLILAIVP 182 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i-~~~l~~~l~~~~~~~~~~~~~~~~ 182 (263)
+.+...+.....|.+.............|.+| ++||+++|+.+....+|+.+ +|.+.+.+.+...++..+......
T Consensus 346 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~ 423 (452)
T PRK11273 346 --NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG 423 (452)
T ss_pred --ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHH
Confidence 12223333333333222111222345568898 67999999998887787765 678888887662244444333333
Q ss_pred HHHHHHHHh
Q 045446 183 AVICLTAVL 191 (263)
Q Consensus 183 ~~~~~~~~~ 191 (263)
.+++++...
T Consensus 424 ~~~~~~~~~ 432 (452)
T PRK11273 424 SILAVILLI 432 (452)
T ss_pred HHHHHHHHH
Confidence 344444443
No 138
>PRK12382 putative transporter; Provisional
Probab=99.20 E-value=3.4e-10 Score=99.90 Aligned_cols=148 Identities=14% Similarity=0.182 Sum_probs=104.0
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
..+.|.+.++.|.++ .+.......++... .++.|++.||+|+||.+..+..+..++...+. ..+ +.+...
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~ 306 (392)
T PRK12382 236 GTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW-----LAP--TAWVAL 306 (392)
T ss_pred HHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-----Hcc--cHHHHH
Confidence 344555555566654 33434444555555 78999999999999999988888777766332 222 235566
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHH
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 190 (263)
+...+.|++.+...+.......|.+| ++||++.|+.+....+|..++|.+.+.+.+...++..+.......+++.+..
T Consensus 307 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 67888898888888877788888888 6799999999999999999999999998876334444444433434444433
No 139
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.20 E-value=3.9e-10 Score=102.93 Aligned_cols=138 Identities=12% Similarity=0.007 Sum_probs=86.1
Q ss_pred CcccchhchHHHHHHcCCCHHHHHH------------HHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHH
Q 045446 29 NNYTFSNYSDALKSLMALTQLQLNN------------LSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQ 95 (263)
Q Consensus 29 ~~~~~~~~~p~l~~~~~~s~~~~~~------------i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~ 95 (263)
..|....+.|.+.++.|.+..+.+. ......++... .+..+++.||+|||++++.+.++.+++...+
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 3455666778887778876542211 12222333343 5678999999999999998887776666544
Q ss_pred HHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 96 WLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 96 ~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
....... ++. ..+........++.....+.......|.|| +.|+++.|+.+....+++.+++.+.+.+.+.
T Consensus 383 ~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 383 GFAYNHL-STH--GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred HHHHHhc-chh--HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 3322111 111 111111111112122223445666789999 5699999999999999999999999988763
No 140
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.19 E-value=9.5e-10 Score=98.15 Aligned_cols=149 Identities=11% Similarity=0.059 Sum_probs=94.1
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccCh-HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPT-SAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
++...+.+++++|+|.+|.+++.....++..+ +++.|+++||+|+ |+++.++.+...++.. .....+ +++.
T Consensus 22 ~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~-----~~~~~~--~~~~ 94 (418)
T TIGR00889 22 LVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF-----FAAQVT--TPAG 94 (418)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-----HHHHhc--CHHH
Confidence 34555667888999999999998888888887 9999999999965 7788877777666655 333332 4567
Q ss_pred HHHHHHHHhhchhhhhhhHHHHH-----------hhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTC-----------MRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA 179 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~-----------~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~ 179 (263)
+.+.+++.|++.+...+...+.. .+.++ |.+..| .+|.++++.+++.+.....+..++..+
T Consensus 95 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~--~~r~~G------~lG~~ig~~l~g~l~~~~~~~~f~~~~ 166 (418)
T TIGR00889 95 MFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP--PIRVMG------TIGFIAAMWAVSLLDIELSNIQLYITA 166 (418)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC--Ceeeeh------hHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 77788888876655544443332 22233 445444 256677777777663222233344434
Q ss_pred HHHHHHHHHHHhhcccCC
Q 045446 180 IVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~ 197 (263)
+.. ++..+.....+|+|
T Consensus 167 ~~~-~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 167 GSS-ALLGVFALTLPDIP 183 (418)
T ss_pred HHH-HHHHHHHhcCCCCC
Confidence 333 33333444555543
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.19 E-value=2.4e-10 Score=98.97 Aligned_cols=128 Identities=14% Similarity=0.033 Sum_probs=103.5
Q ss_pred hchHHHHH-HcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 35 NYSDALKS-LMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 35 ~~~p~l~~-~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
.+.|.+.+ .+|.++.+.+.+.....++..+ .++.|++.||+|||+....+....+++.... ...++ +.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVV-----GLTPP-NFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH-----Hhhch-hHHHHH
Confidence 45577655 4899999999988777777777 8899999999999999988876666665532 22222 246677
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
+..++.|++.+...+.....+.|.+| ++||++.|+.+....++..+++.+.+.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999988888999999999 679999999999999999999999988765
No 142
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.19 E-value=5.1e-10 Score=100.21 Aligned_cols=142 Identities=11% Similarity=0.032 Sum_probs=90.1
Q ss_pred hhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhh-hhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 045446 26 TCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKA-FGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 26 ~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
..+....++.+.|.+.++ +++..+.........+... ..|++|+++||+|+||++..+.+...++...+....... +
T Consensus 264 tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~-~ 341 (462)
T PRK15034 264 TFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT-G 341 (462)
T ss_pred HHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc-c
Confidence 344444566666776433 2333332222223334444 489999999999999999999987777765544433211 1
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCC----------------------CCCchHHHHHhhhhhHHHHHHHH
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPK----------------------NRGPVSGILKGYVGLSTAIFTDI 162 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~----------------------~rg~~~gi~~~~~~lg~~i~~~l 162 (263)
..+++...+..+...++.|..+.+.+..+.+.||+ +-|.+.|+..+..++|+.+.|.+
T Consensus 342 ~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~ 421 (462)
T PRK15034 342 SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQA 421 (462)
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHH
Confidence 12344444434444455566666777788888874 34678899999999999999988
Q ss_pred HHHhhCC
Q 045446 163 CTALFSS 169 (263)
Q Consensus 163 ~~~l~~~ 169 (263)
.+...+.
T Consensus 422 ~g~~~~~ 428 (462)
T PRK15034 422 FGMSLNM 428 (462)
T ss_pred HHHHHHH
Confidence 7777644
No 143
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.18 E-value=4.7e-10 Score=98.71 Aligned_cols=128 Identities=16% Similarity=0.094 Sum_probs=95.2
Q ss_pred chHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 36 YSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 36 ~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
+.|. +++++|.|..+.+++.....++..+ .++.|++.||+|||+.+..+.....+...... ...+ +.+.+.+
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~ 333 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVF----AIGA--NVAVLGL 333 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHH----HhCC--chHHHHH
Confidence 3444 5678999999999987777777777 89999999999999998887765433222111 1111 3344555
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
..++.+...+...+.....+.|.+| ++||+++|+.+....+|+.++|.+.+.+.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5455555555556667778889999 6799999999999999999999999998876
No 144
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.15 E-value=6.4e-10 Score=99.35 Aligned_cols=160 Identities=15% Similarity=0.061 Sum_probs=103.1
Q ss_pred hHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc----cChH-HHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 37 SDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR----LPTS-AILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r-~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+.+.+++|+|+.+.+++.....+...+ .|+.|+++|| +||| +.++.+....+++.+.++... ........+.
T Consensus 23 ~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~-~~~~~~~~~~ 101 (437)
T TIGR00792 23 LFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP-DFSATGKLVY 101 (437)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC-CCCcchHHHH
Confidence 4557888999999999988888888777 9999999998 6774 456677777777766443211 1111112344
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhhC-------CChhHHH-HHHHH
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALFS-------SKPSAFL-LILAI 180 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~-------~~~~~~~-~~~~~ 180 (263)
+++.+.+.+++.+....+..+...|..+ ++|++..++.+.+..+|+.+.+.+...+.. ...|+.. ...++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 5566777888888777777777777663 679999999887777777666554443331 1234433 33343
Q ss_pred HHHHHHHHHHhhcccCC
Q 045446 181 VPAVICLTAVLFLHENQ 197 (263)
Q Consensus 181 ~~~~~~~~~~~~~~~~~ 197 (263)
+..+..++.....+|++
T Consensus 182 l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 182 IGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHcCCEecC
Confidence 33333444445556554
No 145
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.15 E-value=2.5e-09 Score=94.13 Aligned_cols=136 Identities=10% Similarity=0.035 Sum_probs=87.4
Q ss_pred hHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 045446 37 SDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFL 115 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (263)
.|.+++.+|.|+++.+++.....++..+ .++.|++.||+|+|+....+..+..++...+... .+ +.+...+..
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~----~~--~~~~~~~~~ 296 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF----GG--MKTASLIFA 296 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH----Hh--hHHHHHHHH
Confidence 3556777899999999987777787777 8999999999999999998888777776533211 11 123333444
Q ss_pred HHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHH
Q 045446 116 CMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLIL 178 (263)
Q Consensus 116 ~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~ 178 (263)
++.+.|.....++......+..+++|..+.+..+....+|.+++|.+.+.+.+. ...+..+..
T Consensus 297 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~ 360 (382)
T PRK10091 297 FICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALP 360 (382)
T ss_pred HHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHH
Confidence 445555444444444334444432233333334566779999999999998875 333333333
No 146
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=2.6e-09 Score=94.04 Aligned_cols=130 Identities=12% Similarity=0.085 Sum_probs=99.9
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
..+.|.+.++.|.++++.+.......++... .++.|++.||+|+|+.+..+.+...++.. ..+..+ +.+.++
T Consensus 225 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~-----~~~~~~--~~~~~~ 297 (382)
T PRK11128 225 YGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWG-----LMGSTT--ALPWLI 297 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-----HHHhhh--hHHHHH
Confidence 3444666567899999999866666666666 78999999999999999988887777665 223333 346677
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHH-hhhhhHHHHHHHHHHHhhCCC
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILK-GYVGLSTAIFTDICTALFSSK 170 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~-~~~~lg~~i~~~l~~~l~~~~ 170 (263)
+..++.|++.+...+.......+..|+++++..+... ...+.|..++|.+++.+.+..
T Consensus 298 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 298 VIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7889999998988888888887775567888888886 445678789999999988763
No 147
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.14 E-value=1.6e-08 Score=88.42 Aligned_cols=160 Identities=13% Similarity=0.113 Sum_probs=117.8
Q ss_pred CCCchhHHHHHHHHHHHHhhCCcc-cchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHH
Q 045446 8 TLPAAKWLGFVTAIWVQATCGNNY-TFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGS 85 (263)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~ 85 (263)
+..++||..+++..+....++..+ .|+.......+.|+ +.+...|.+..+.+.+.. +.++-|+.||+|-|....+|.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 457889998877666554444433 35555555677788 777788888888887776 888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCchHH--HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHH
Q 045446 86 LEGLIGYGVQWLVVSEKIHPLPYW--QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDI 162 (263)
Q Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~--~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l 162 (263)
.+.++|..+=......+.++ .++ ....+..+.+..+-.......-+..-||| ++|..|..+....+.+|.+++..+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999988432222111111 234 56667888888777776666677788998 789999999888888999888777
Q ss_pred HHHhhCC
Q 045446 163 CTALFSS 169 (263)
Q Consensus 163 ~~~l~~~ 169 (263)
...++.+
T Consensus 196 ppilV~~ 202 (480)
T KOG2563|consen 196 PPILVPS 202 (480)
T ss_pred cceecCC
Confidence 7777654
No 148
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.14 E-value=1.5e-09 Score=98.12 Aligned_cols=165 Identities=15% Similarity=0.103 Sum_probs=118.3
Q ss_pred CCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChH--HHHHHHHHHHHHHHHHHH----HHHh
Q 045446 28 GNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTS--AILIIGSLEGLIGYGVQW----LVVS 100 (263)
Q Consensus 28 ~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r--~~~~~g~~~~~~g~~~~~----~~~~ 100 (263)
+.+.........-++++|+++.|...+.....+.+.. ..+.|++.||+|.| +++..+.+...+-.+.-. ....
T Consensus 296 g~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~ 375 (477)
T PF11700_consen 296 GVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF 375 (477)
T ss_pred HHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 3343344444445678999999998888888888777 89999999999999 888877765533222110 0001
Q ss_pred ccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHH
Q 045446 101 EKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLIL 178 (263)
Q Consensus 101 ~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~ 178 (263)
+. .+-|.+.+..++.|+..|..++.+-++..|..| ++.+...|+.....-.++.++|.+.+.+.+. +..+.-+..
T Consensus 376 g~---~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~ 452 (477)
T PF11700_consen 376 GL---KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLF 452 (477)
T ss_pred Cc---ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 12 234777888889999999999999999999999 5689999999999989999999999988765 333343333
Q ss_pred HHHHHHHHHHHHhhccc
Q 045446 179 AIVPAVICLTAVLFLHE 195 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~~~ 195 (263)
..+..+++++....++.
T Consensus 453 l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 453 LLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHhhccc
Confidence 33445566666665544
No 149
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.12 E-value=1.9e-09 Score=96.60 Aligned_cols=145 Identities=13% Similarity=0.201 Sum_probs=85.8
Q ss_pred cchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc--Ch-HHHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 045446 32 TFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL--PT-SAILIIGSLEGLIGYGVQWLVVSEKIHPL 106 (263)
Q Consensus 32 ~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (263)
....+.|.+ ++++|.|..+.+.......++..+ .+..|+++||+ ++ |+......+........+. ... ..
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~--~~~-~~-- 335 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLW--LMP-FA-- 335 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHH--Hcc-cc--
Confidence 344566665 467899999999877777777777 89999999999 33 3322221111111111111 111 11
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIV 181 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~ 181 (263)
+........+..|++.............|.+| ++||+++|+.+....+|..++|.+.+.+.+. ++...+...+..
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~ 412 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIA 412 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHH
Confidence 22222222222332221111222345678888 6799999999999999999999999988876 433333333333
No 150
>TIGR00895 2A0115 benzoate transport.
Probab=99.12 E-value=7.5e-10 Score=97.06 Aligned_cols=129 Identities=13% Similarity=0.087 Sum_probs=98.0
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
+....+.|.+.+++|.++++.+++.....++..+ .++.|++.||+|+|+......+....... +.. ... +.+
T Consensus 267 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~--~~~ 339 (398)
T TIGR00895 267 YFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVL-VGS----TLF--SPT 339 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH-HHH----Hhh--CHH
Confidence 3445567888889999999999887777787777 89999999999999555443333332222 211 111 234
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
......++.|++.+...+...+.+.|.+| ++||++.|+......+|..++|.+.+.+
T Consensus 340 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 340 LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 55666778888888888899999999999 6799999999999999999999988765
No 151
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.11 E-value=1e-08 Score=89.72 Aligned_cols=126 Identities=11% Similarity=0.107 Sum_probs=82.9
Q ss_pred chHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 36 YSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 36 ~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
+.|. +.+++|.++++.+++.....++..+ .++.|++.||+|+|++...+.....+....+.. .+..+ .+.+...+
T Consensus 216 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~ 292 (377)
T PRK11102 216 AGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVV--SALLD-LGFWALVV 292 (377)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH--HHHHh-hhHHHHHH
Confidence 3454 5677899999999977777777776 899999999999999998887654433322211 11111 12344444
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhh-hhhHHHHHHHHHH
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGY-VGLSTAIFTDICT 164 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~-~~lg~~i~~~l~~ 164 (263)
...+.+.+.+...........|..|++||++.++.+.. .++|+.+++.+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 293 GVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444444555555666677777888899999998654 4566666665543
No 152
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.10 E-value=6.2e-09 Score=92.17 Aligned_cols=126 Identities=10% Similarity=-0.060 Sum_probs=93.7
Q ss_pred hHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 045446 37 SDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFL 115 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (263)
.|.+.+++|+++++.+.+.....++..+ .++.|++.||.++ +....+..........+ ....+ +.+.+....
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l----~~~~~--~~~~~~~~~ 312 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVL----TLWGS--DKIVATGVA 312 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHH----HHHhh--hHHHHHHHH
Confidence 4777888999999999877777777777 8899999999654 44444444333322211 11112 236666778
Q ss_pred HHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 116 CMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 116 ~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
++.|++.+...+...+.+.+..|++++++.++.....++|..+++.+++.+.+.
T Consensus 313 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 313 IIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred HHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888998888888888888888897788888888888889999999999999876
No 153
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.10 E-value=2.2e-09 Score=97.39 Aligned_cols=157 Identities=13% Similarity=0.025 Sum_probs=92.4
Q ss_pred chhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHH-----HHHHHHHHHHHHHHHHHHHHhccCCC
Q 045446 33 FSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSA-----ILIIGSLEGLIGYGVQWLVVSEKIHP 105 (263)
Q Consensus 33 ~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~-----~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (263)
+..+.|.+ .+++|++.++.+.+.....++..+ .+++|+++||+|||+ ...........+.... .....+
T Consensus 271 ~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~---~~~~~~- 346 (476)
T PLN00028 271 MDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCI---WLGRAN- 346 (476)
T ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHH---Hhcccc-
Confidence 33445554 677899999999988777777777 899999999998762 2221111111111111 112222
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHH
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVI 185 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~ 185 (263)
+.+...+..++.+++.+...+.......+..|++||++.|+.+....+|+.+++.+.+. -+...+...++......++
T Consensus 347 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~-~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 347 -SLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFT-GSSYSTETGISLMGVMIIA 424 (476)
T ss_pred -hHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHh-cCCccHhhHHHHHHHHHHH
Confidence 22333444445555554444455555566667889999999988877888888776541 1122233444444444455
Q ss_pred HHHHHhhccc
Q 045446 186 CLTAVLFLHE 195 (263)
Q Consensus 186 ~~~~~~~~~~ 195 (263)
+.+..++.+.
T Consensus 425 ~~~~~~~~~~ 434 (476)
T PLN00028 425 CTLPVAFIHF 434 (476)
T ss_pred HHHHHHheec
Confidence 6666666653
No 154
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.09 E-value=3.4e-09 Score=95.45 Aligned_cols=131 Identities=6% Similarity=-0.042 Sum_probs=88.7
Q ss_pred chHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhc----ccChHHHHHHHH-HHHHHHHHHHHHHHh-c--c----
Q 045446 36 YSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASD----RLPTSAILIIGS-LEGLIGYGVQWLVVS-E--K---- 102 (263)
Q Consensus 36 ~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~D----r~G~r~~~~~g~-~~~~~g~~~~~~~~~-~--~---- 102 (263)
+.+.+.+++|.+..+.+++.....+...+ +|+.|+++| |+||||.++.+. ....++..++...-. . .
T Consensus 26 ~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~ 105 (477)
T TIGR01301 26 LLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNL 105 (477)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccc
Confidence 34556788999999999977777666666 999999999 599999998864 444444443321100 0 0
Q ss_pred -CCCchH--HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCC--CchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 103 -IHPLPY--WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNR--GPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 103 -~~~~~~--~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~r--g~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
..+... +...++..+..++.....++..+.+.|.+| ++| +.+.++.+...++|+.+++.+++..
T Consensus 106 ~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 106 DKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 122233334455777778888899999999 434 6799999999999999998887753
No 155
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.09 E-value=7.6e-09 Score=91.29 Aligned_cols=143 Identities=13% Similarity=-0.085 Sum_probs=95.3
Q ss_pred chHHHHHHcCCCHHHHHHHHHHHH-Hhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 36 YSDALKSLMALTQLQLNNLSVAKD-VGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 36 ~~p~l~~~~~~s~~~~~~i~~~~~-~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
+.+.+.+|.|+++++.+++..... ....+ .++.|++.||+|+|+.+..+.+...+..... ..........+.+.+..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW-FAQAAFWLAPGIAVAWS 308 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHHHcccCCcHHHHHH
Confidence 334555568999999999655544 45556 6899999999999999988776553333222 11111111112233444
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHH
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILA 179 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~ 179 (263)
...+++++.+...+.......+..+ +++|+..+..+...++|..++|.+.+.+.+.......+..+
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~ 376 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSG 376 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 4556666677777777777777665 45899999999999999999999999888753233344333
No 156
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.09 E-value=1.1e-08 Score=90.82 Aligned_cols=151 Identities=13% Similarity=0.169 Sum_probs=94.3
Q ss_pred hHHHHHHcCCCHHHHHHHHHH-HHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 37 SDALKSLMALTQLQLNNLSVA-KDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~~~-~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
.|.+.+++|.++++.+++... ...+..+ .++.|++.||+|+|+....+.+...+........ +..++ +.+.+...
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~--~~~~~-~~~~~~~~ 309 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVL--AVTPK-HLWTMALA 309 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--HhcCC-cHHHHHHH
Confidence 355677899999999996544 3444555 7899999999999998877776655554433221 22211 23444444
Q ss_pred H----HHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHH
Q 045446 115 L----CMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 115 ~----~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 190 (263)
. +..|++.+...+.....+.+.+| ++..++.....+++..+++++++.+.+...+...+..+....+++++..
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 310 IGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 3 34455555556666666666666 2334555656677887777888888776445555665555555555444
Q ss_pred hhc
Q 045446 191 LFL 193 (263)
Q Consensus 191 ~~~ 193 (263)
...
T Consensus 387 ~~~ 389 (402)
T PRK11902 387 WLM 389 (402)
T ss_pred HHH
Confidence 433
No 157
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.06 E-value=3.6e-09 Score=94.90 Aligned_cols=137 Identities=12% Similarity=-0.023 Sum_probs=80.3
Q ss_pred ccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 31 YTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 31 ~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
+.+..+.|.+ ++..|.|..+.++......++..+ .+..|+++||+++++....+.................... +.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 345 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAG--NP 345 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCC--ch
Confidence 4455566776 555799999999877777777776 8999999999965432223332222111111110111111 22
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHH-HHHHHHHHHhhCC
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLST-AIFTDICTALFSS 169 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~-~i~~~l~~~l~~~ 169 (263)
+......+..|.+.............|.+| ++||+++|+.+....+++ .++|.+.+.+.+.
T Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~ 408 (438)
T TIGR00712 346 LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 408 (438)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh
Confidence 323333333343322111122235668888 679999999987776764 5788888888775
No 158
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.05 E-value=3.3e-09 Score=92.05 Aligned_cols=167 Identities=16% Similarity=0.095 Sum_probs=119.0
Q ss_pred HHHHhhCCcccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHH
Q 045446 22 WVQATCGNNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVV 99 (263)
Q Consensus 22 ~~~~~~~~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~ 99 (263)
......|.+..... ...+ ++++|+++.|...+....++.+.. +++.|+|.||+|.|+++..+.+...+.++...
T Consensus 261 ~~~~~DGv~til~~-~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~--- 336 (438)
T COG2270 261 RFFYIDGVNTILAM-GGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI--- 336 (438)
T ss_pred HHHHHhhHHHHHHH-HHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH---
Confidence 33334454443333 2334 668999999999999999988888 89999999999999999999987766665321
Q ss_pred hccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHH
Q 045446 100 SEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLI 177 (263)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~ 177 (263)
... . + ....+...+.|...|..+..+-++..+..| +|-++..|+.+.....++..+|.+.+.+.+- +..+.-..
T Consensus 337 ~~~-~--~-~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 337 FLE-G--E-LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred Hcc-c--c-HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 111 1 2 223345567788899999999999999999 6789999999999889999999988877643 33333333
Q ss_pred HHHHHHHHHHHHHhhcccC
Q 045446 178 LAIVPAVICLTAVLFLHEN 196 (263)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~ 196 (263)
.-++...++++....++++
T Consensus 413 ~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHhhHhhEEeecCC
Confidence 3334445566665555443
No 159
>PRK10054 putative transporter; Provisional
Probab=99.05 E-value=1.2e-08 Score=90.32 Aligned_cols=121 Identities=7% Similarity=-0.083 Sum_probs=88.0
Q ss_pred HcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhc
Q 045446 43 LMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNS 121 (263)
Q Consensus 43 ~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g 121 (263)
+.+.++...+++.......... +++.|++.||+++|+.+..+.+...++...+.. .. .+.+.+.+...+.|+|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIF-----SG-NSLLLWGMSAAVFTVG 311 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHH-----cc-hHHHHHHHHHHHHHHH
Confidence 4455666666654444444444 788899999999999999888777777663321 11 1345566677888888
Q ss_pred hhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCC
Q 045446 122 TTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSK 170 (263)
Q Consensus 122 ~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~ 170 (263)
.+...+.....+.+..| +.|++..|..+ ...+|..++|.+++.+.+..
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 88777777778888888 56999988765 44489999999999998763
No 160
>TIGR00898 2A0119 cation transport protein.
Probab=99.02 E-value=4.9e-09 Score=95.59 Aligned_cols=130 Identities=15% Similarity=0.079 Sum_probs=86.0
Q ss_pred HHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhc
Q 045446 59 DVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNF 137 (263)
Q Consensus 59 ~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~f 137 (263)
.+.... .+..+++.||+|||+.+..+.+..+++.+.+.. .++...+......++.+.+.+..++.......|.+
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF-----VPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-----cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 334444 678899999999999999988877777663322 12212233344455566666777778888889999
Q ss_pred C-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhccc
Q 045446 138 P-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLHE 195 (263)
Q Consensus 138 p-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (263)
| +.|++++|+.+....+|+.++|.+.+ +.+.+....+.+.+... +++.+...+++|
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~lpe 496 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLA-LLAGILTLFLPE 496 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHH-HHHHHHHHcCcC
Confidence 9 67999999999999999999999888 43323333333333333 333333444443
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.02 E-value=2.3e-08 Score=91.44 Aligned_cols=149 Identities=16% Similarity=0.110 Sum_probs=114.1
Q ss_pred chHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 36 YSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 36 ~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
..|.+ ++.+|.++...+++.....+|+.+ ++..+++.+|+++++++..+.+.++++.+ ..+..+ +.|..++
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~-----~lal~~--~~~~~~~ 312 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALL-----LLALSP--SFWLALI 312 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHH-----HHhcch--HHHHHHH
Confidence 35766 677999999999999999999998 88999999999999998888888777766 334443 4466777
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHh
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
..++.|++.....+...+...+..| +.|||++++.+.....+..++..+.+.+.+.......+.++....+++.+...
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 7888898888888888888899999 56999999998888788888888888887663333334444443344444333
No 162
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.00 E-value=9e-09 Score=87.90 Aligned_cols=160 Identities=13% Similarity=0.104 Sum_probs=126.4
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
-..+...|.++...+.+..|...+......+..+ ...+|.++|++|||+.+........+.-+ ..+.++ ++.
T Consensus 95 m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~-----is~~sp--nf~ 167 (528)
T KOG0253|consen 95 MLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGV-----ISGASP--NFA 167 (528)
T ss_pred HHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHH-----hhcCCC--Cee
Confidence 3445667888999999999999999999999998 89999999999999999887776655555 666665 457
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLT 188 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (263)
.++++|.+.|+|.|. .|...+.-.|.-| .+|++-+-.. ..+.+|.+....+.-..+.+..|++.++...++......
T Consensus 168 ~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~ 245 (528)
T KOG0253|consen 168 SLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAAR 245 (528)
T ss_pred hhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHH
Confidence 799999999999988 7777888888888 6788777666 777788888877777777776666766666677666666
Q ss_pred HHhhcccCCCC
Q 045446 189 AVLFLHENQPA 199 (263)
Q Consensus 189 ~~~~~~~~~~~ 199 (263)
....+.|.|+.
T Consensus 246 f~~w~~ESpRf 256 (528)
T KOG0253|consen 246 FLVWVYESPRF 256 (528)
T ss_pred HHhhcccCcch
Confidence 66777776653
No 163
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.00 E-value=4.8e-08 Score=87.64 Aligned_cols=168 Identities=13% Similarity=0.033 Sum_probs=109.3
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCC-ch
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHP-LP 107 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~ 107 (263)
.+....|+..+-++.|+++.++.+........... .+.+.++.||.|||++++.+.....+....+.....-.... ..
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSW 365 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33456677888888999999999988888888877 89999999999999999999988877777664433322111 11
Q ss_pred HHHH-HHHHHHHhhchhh-hhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHH
Q 045446 108 YWQM-CIFLCMGGNSTTW-MNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAV 184 (263)
Q Consensus 108 ~~~l-~~~~~l~g~g~~~-~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 184 (263)
.+.. +++.++..+.-+. ..|...-+.+|.|| +.|..+++.......++..+-......+-+.-....++...++...
T Consensus 366 ~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~ 445 (485)
T KOG0569|consen 366 LSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAI 445 (485)
T ss_pred HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 1112 2233333322222 24667888999999 6799999999988877777666665555443222333333444444
Q ss_pred HHHHHHhhcccCC
Q 045446 185 ICLTAVLFLHENQ 197 (263)
Q Consensus 185 ~~~~~~~~~~~~~ 197 (263)
..+.....++|.+
T Consensus 446 ~~i~~~~~lPETk 458 (485)
T KOG0569|consen 446 FLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHhCcccC
Confidence 4444444444433
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.99 E-value=1.6e-08 Score=89.35 Aligned_cols=139 Identities=10% Similarity=0.093 Sum_probs=96.1
Q ss_pred CCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchh
Q 045446 45 ALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTT 123 (263)
Q Consensus 45 ~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~ 123 (263)
+.+.++.+.+.+...+.... .+..|++.||+|+|+.+.++.++.+++.... ...+ +.+.++..++++|++.+
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~-----~~~~--~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGS-----SFAT--TALEVVILKMLHAFEVP 322 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH-----HhcC--ChHHHHHHHHHHHHHHH
Confidence 55566667665555555555 7889999999999999999888877766632 2233 33566777888998877
Q ss_pred hhhhhHHHHHhhhcC-CCCCchHHH-HHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHH
Q 045446 124 WMNTAVLVTCMRNFP-KNRGPVSGI-LKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLTAV 190 (263)
Q Consensus 124 ~~~~~~~~~~~~~fp-~~rg~~~gi-~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 190 (263)
...........+.+| +.|++..+. .+...++|+.+++.+.+.+.+. +....+...++...+.+++..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 666666666677777 346665555 4567789999999999999876 554555555555544444443
No 165
>PRK10133 L-fucose transporter; Provisional
Probab=98.99 E-value=2.2e-08 Score=89.96 Aligned_cols=120 Identities=10% Similarity=-0.028 Sum_probs=93.7
Q ss_pred HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHh
Q 045446 41 KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGG 119 (263)
Q Consensus 41 ~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 119 (263)
++.+|.|+.+.++......++..+ .++.|++.||+|+|+++..+..+..++..... ..++. + ......+.|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~-----~~~~~--~-~~~~~~l~g 358 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA-----FAGGH--V-GLIALTLCS 358 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-----HcCCh--H-HHHHHHHHH
Confidence 456899999999988888888888 89999999999999999888776655544221 12221 2 233456789
Q ss_pred hchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 120 NSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 120 ~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
++.+..+|..++...|.+|++.+.+.++... ...|+.++|++.+.+.+.
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHh
Confidence 9999999999999999999878888888864 447888999999988765
No 166
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.98 E-value=1.1e-08 Score=88.93 Aligned_cols=122 Identities=9% Similarity=0.031 Sum_probs=88.7
Q ss_pred cchhchHHHHHHcCCCHHHHHHHHHH-HHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 045446 32 TFSNYSDALKSLMALTQLQLNNLSVA-KDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKI----HP 105 (263)
Q Consensus 32 ~~~~~~p~l~~~~~~s~~~~~~i~~~-~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~----~~ 105 (263)
....+.|.+.+++|++.++.+.+... ..++..+ .+++|++.||+|+|+.+..+.++..++...+........ +.
T Consensus 227 ~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 227 AATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 34445566655699999999885554 4455556 789999999999999998888877766554332211110 00
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhh
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVG 153 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~ 153 (263)
.+.+.+....++.+++.+...+...+.+.|.+| ++||+..|+.+...+
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 234666677888899999999999999999999 679999999887654
No 167
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.97 E-value=4.6e-08 Score=88.65 Aligned_cols=156 Identities=16% Similarity=0.151 Sum_probs=105.0
Q ss_pred hhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccC-----hHHHHHHHHHHHH-HHHHHHHHHHhccCCCch
Q 045446 34 SNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLP-----TSAILIIGSLEGL-IGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~ 107 (263)
....|.+++++|.|.++.+.......+...+.+++|.++||++ ||+.++++.++.. ++.. ..+..++ .
T Consensus 46 ~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~-----~l~~~~~-~ 119 (468)
T TIGR00788 46 LPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYG-----LLPGKVS-S 119 (468)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHH-----hcccccc-h
Confidence 3455778889999999999888888888888888999999998 7777777776652 2222 2222222 1
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCch---HHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHH-HHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPV---SGILKGYVGLSTAIFTDICTALFSSKPSAFLLI-LAIVPA 183 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~---~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~-~~~~~~ 183 (263)
.....+..++.+++.+..+.++-....|..+|++... .+......++|..+++.+.+.+.+...|+..+. .+....
T Consensus 120 ~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~l 199 (468)
T TIGR00788 120 AKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLL 199 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 2333346788899999999999999999988444333 333333345789999999988877634444444 444443
Q ss_pred HHHHHHHhhcccC
Q 045446 184 VICLTAVLFLHEN 196 (263)
Q Consensus 184 ~~~~~~~~~~~~~ 196 (263)
+......+.+|+
T Consensus 200 -l~~~~~~~~~E~ 211 (468)
T TIGR00788 200 -LQLFVSNLSKER 211 (468)
T ss_pred -HHHHHHHhcccc
Confidence 334444555554
No 168
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.96 E-value=1.4e-08 Score=91.64 Aligned_cols=158 Identities=13% Similarity=0.127 Sum_probs=93.6
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHH--------HHHHHHHHHHHHHHHHHHH
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAI--------LIIGSLEGLIGYGVQWLVV 99 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~--------~~~g~~~~~~g~~~~~~~~ 99 (263)
.+.+..+.|.+ ++++|.|..+.++......++..+ .++.|+++||+++|+. +..+......+...+ ..
T Consensus 277 ~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 354 (465)
T TIGR00894 277 YTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAY--AL 354 (465)
T ss_pred HHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 34555677876 677899999999977776677666 8999999999865421 111111111111111 11
Q ss_pred hccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCC---hhHHHH
Q 045446 100 SEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSK---PSAFLL 176 (263)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~---~~~~~~ 176 (263)
..... +.+..++...+.+.+.+...+.......+..|+.+|.+.|+.+....+++.+.|.+.+.+.+.+ .|...+
T Consensus 355 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f 432 (465)
T TIGR00894 355 PYLSA--AFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVF 432 (465)
T ss_pred HHcCC--chHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHH
Confidence 11111 1233333344444444444444445555667788999999999999999999999998877642 244444
Q ss_pred HHHHHHHHHHHHHHh
Q 045446 177 ILAIVPAVICLTAVL 191 (263)
Q Consensus 177 ~~~~~~~~~~~~~~~ 191 (263)
.+.....+++.+...
T Consensus 433 ~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 433 LIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHee
Confidence 444344444444333
No 169
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.94 E-value=3.4e-08 Score=84.67 Aligned_cols=129 Identities=14% Similarity=0.092 Sum_probs=95.8
Q ss_pred cchhchHHHHH---HcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 32 TFSNYSDALKS---LMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 32 ~~~~~~p~l~~---~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
....+.+.+.+ .+|.++++.+.....+..+..+ ....+++.||+|+||++..+..+..++...... .++ .
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-----~~~-~ 231 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-----THG-Y 231 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----cCC-H
Confidence 33444455543 3699999999987777777777 889999999999999988887776666542221 111 1
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+.. ....+.|++.+..+|...+...+.+|++.+++.++. ....+|+++.|++.+.+.+.
T Consensus 232 -~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 232 -VAM-WFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred -HHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 212 234467899999999999999999997777888886 45569999999999988775
No 170
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.93 E-value=1.5e-08 Score=88.14 Aligned_cols=132 Identities=12% Similarity=0.010 Sum_probs=95.9
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc-ChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL-PTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.+....+.|.+.++.|.|.++.+.+.....++..+ .++.|++.||+ +||+....+.+...++...+. ..++.+
T Consensus 213 ~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 287 (355)
T TIGR00896 213 YYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLL-----FAPMHG 287 (355)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH-----HhhhhH
Confidence 34445567877777899999999988888888877 89999999999 566677777777766665332 122211
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
. . ....+.|++.+..++...+...+..+ +++++..|+.+....++..++|.+.+.+.+.
T Consensus 288 ~--~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 288 L--W-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred H--H-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 13456788888888877776665554 4578999998888888889999999988764
No 171
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.92 E-value=4.9e-08 Score=86.43 Aligned_cols=124 Identities=11% Similarity=-0.023 Sum_probs=93.2
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 045446 39 ALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCM 117 (263)
Q Consensus 39 ~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (263)
.+++.+|.|+.+.+++.....++..+ ++..+++.||+++|++...+... .+.... .+..+ +.+...+..++
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~-----~~~~~--~~~~~~~~~~~ 302 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLL-----MALQH--SLLPAYPLLIL 302 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHH-----HHHHh--HHHHHHHHHHH
Confidence 35677999999999988888888888 89999999999999888777532 322221 12222 33555566778
Q ss_pred HhhchhhhhhhHHHHHhhhcCCC--CCchHHHHHhhhhhHHHHHHHHHHHhhCCC
Q 045446 118 GGNSTTWMNTAVLVTCMRNFPKN--RGPVSGILKGYVGLSTAIFTDICTALFSSK 170 (263)
Q Consensus 118 ~g~g~~~~~~~~~~~~~~~fp~~--rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~ 170 (263)
.|++.+...++..+...+.-|++ +|++.++.+....++..++..+.+.+...+
T Consensus 303 ~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
T PRK11195 303 IGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLG 357 (393)
T ss_pred HHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888888887776653 699999999999999999988888664333
No 172
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.92 E-value=1.6e-07 Score=82.88 Aligned_cols=127 Identities=13% Similarity=0.192 Sum_probs=90.4
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 045446 39 ALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCM 117 (263)
Q Consensus 39 ~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (263)
.+++.+|.|..+.+++.....++..+ .++.+++.||++++.... ......+..... ........+.+.+.....+
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 308 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQS--VICCLLAGLLMW--IPGWFGVMNVWTLLVPAAL 308 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH--HHHHhccccHHHHHHHHHH
Confidence 34566899999999877777777776 788899999998433332 222222222111 1111111133556667788
Q ss_pred HhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 118 GGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 118 ~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.|.|.+...+.......+.+|+++|++.++.+....+|+.+++.+.+.+.+.
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 309 FFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 8999999999999999999998899999999999999999999998877654
No 173
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.91 E-value=3.2e-07 Score=80.92 Aligned_cols=61 Identities=8% Similarity=-0.053 Sum_probs=48.9
Q ss_pred chHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHH
Q 045446 36 YSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQW 96 (263)
Q Consensus 36 ~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~ 96 (263)
+.|. +++++|.++.+.+.+.....++..+ .++.|++.||+|||+....+.....++...+.
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 287 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLA 287 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 3454 4678899999988877777777666 88999999999999999999888777776443
No 174
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.90 E-value=1.1e-08 Score=91.37 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhh
Q 045446 47 TQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWM 125 (263)
Q Consensus 47 s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~ 125 (263)
+..+.+++.....++..+ .++.|++.||+|+|+++..+.++..++...+... + .+.+...+..++.|++.+..
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~g~~~~~~ 328 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-----G-SNLPLILVLIILAGFGQNFV 328 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----c-hhHHHHHHHHHHHHHHHHHH
Confidence 455666655555666666 8899999999999999999988877776644321 1 13355566677888888888
Q ss_pred hhhHHHHHhhhcC--------CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 126 NTAVLVTCMRNFP--------KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 126 ~~~~~~~~~~~fp--------~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
.+...+.+.|..| +++|++.|+.+....+|..+++.+.+.+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 329 TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887778777643 347899999999999999999999888764
No 175
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.90 E-value=1.9e-08 Score=89.19 Aligned_cols=128 Identities=13% Similarity=-0.034 Sum_probs=90.4
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhh-hhhHHHhhh-cccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKA-FGLLSGLAS-DRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~-~~~~~G~l~-Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
.+.|.+.++.+.++.+.+++.....++.. ...+.+++. ||++.|+.+..+.+...++..++ +..+ +.+.+.
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l-----~~~~--~~~~~~ 301 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI-----GMVS--NLQQLF 301 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-----HHhh--hHHHHH
Confidence 34577655544467777876555555444 344445555 55777777777777777666533 2222 234455
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+...+.+++.+...+...+.+.+..| ++||+++|+.+...++|..++|.+.+.+.+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 56677788888888888888889998 6799999999999999999999999998865
No 176
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.89 E-value=1.4e-08 Score=90.53 Aligned_cols=142 Identities=11% Similarity=0.028 Sum_probs=89.3
Q ss_pred CCcccchhchHHHHHHc--CCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHH-HHHHHHHHHHHHHHHHHHhccC
Q 045446 28 GNNYTFSNYSDALKSLM--ALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAIL-IIGSLEGLIGYGVQWLVVSEKI 103 (263)
Q Consensus 28 ~~~~~~~~~~p~l~~~~--~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~-~~g~~~~~~g~~~~~~~~~~~~ 103 (263)
...+.+..+.|.+.+++ +.++.+.+.......++..+ .+..|+++||+++|+.. ....+...++.. + ... .
T Consensus 256 ~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~-~---~~~-~ 330 (412)
T TIGR02332 256 NTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL-L---ASA-T 330 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH-H---HHh-c
Confidence 34555667788876664 67888888887888888777 88999999999977753 333333333322 1 111 1
Q ss_pred CCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHH
Q 045446 104 HPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLL 176 (263)
Q Consensus 104 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~ 176 (263)
++ +.. ......+.++|.....+.......|.+| ++|++++|+.+....+|+.++|.+.+.+.+. +.+...+
T Consensus 331 ~~-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~ 403 (412)
T TIGR02332 331 DH-NLI-QLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGL 403 (412)
T ss_pred CC-HHH-HHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhH
Confidence 11 111 1112222233332222333344456788 6799999999999999999999999988875 3344433
No 177
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.89 E-value=3.9e-08 Score=98.15 Aligned_cols=123 Identities=17% Similarity=0.146 Sum_probs=96.8
Q ss_pred HHHHHHcCCCHH-HHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 045446 38 DALKSLMALTQL-QLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFL 115 (263)
Q Consensus 38 p~l~~~~~~s~~-~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (263)
+.+++.+|.+.. +.+++.....++..+ .++.|++.||+++|+++.++.+..+++.+.+.. .. +.+.+++..
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~ 329 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPT-----AP--SLASVLVLF 329 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHH-----hh--hHHHHHHHH
Confidence 345777999998 889988888888877 899999999999999888888777766663322 22 345566677
Q ss_pred HHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 116 CMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 116 ~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
++.|++.++..+...+.+.+..| ++||+++|+.+....+|..+++.++..+.
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888889998 67999999999888888877766665443
No 178
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.89 E-value=2.8e-07 Score=81.31 Aligned_cols=167 Identities=13% Similarity=-0.070 Sum_probs=96.4
Q ss_pred hhCCccc-chhchHHHHHHcCCCHHHHHHHH--HHHHHhhhh-hhHHH-hhhcccChHHHHHHHHHHHHH-HHHHHHHHH
Q 045446 26 TCGNNYT-FSNYSDALKSLMALTQLQLNNLS--VAKDVGKAF-GLLSG-LASDRLPTSAILIIGSLEGLI-GYGVQWLVV 99 (263)
Q Consensus 26 ~~~~~~~-~~~~~p~l~~~~~~s~~~~~~i~--~~~~~~~~~-~~~~G-~l~Dr~G~r~~~~~g~~~~~~-g~~~~~~~~ 99 (263)
..|..+. ...+.|.+.++.|.|.++.+.++ ........+ +|+.+ +..||+||||..+++...... ....+ ..
T Consensus 12 ~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~--~~ 89 (390)
T TIGR02718 12 SQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASL--AL 89 (390)
T ss_pred HHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHH--Hc
Confidence 3444433 34667888888999999999963 233444444 78774 589999999997666533221 11111 11
Q ss_pred hccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHH
Q 045446 100 SEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLIL 178 (263)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~ 178 (263)
.....+.. ..+.....+.++..+..++..-....|..+ ++++...+....+..+|..+++...+.+.+...|+..+..
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~ 168 (390)
T TIGR02718 90 VGPDVAGA-GWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLL 168 (390)
T ss_pred CCcchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 11121112 222333344455555566666667777777 4567777777777778888888777777766445544444
Q ss_pred HHHHHHHHHHHHhhccc
Q 045446 179 AIVPAVICLTAVLFLHE 195 (263)
Q Consensus 179 ~~~~~~~~~~~~~~~~~ 195 (263)
......+..+...+.++
T Consensus 169 ~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 169 VACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 43333333333344433
No 179
>PRK09669 putative symporter YagG; Provisional
Probab=98.87 E-value=1.2e-07 Score=85.18 Aligned_cols=124 Identities=11% Similarity=-0.025 Sum_probs=83.1
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc----cChH-HHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 38 DALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR----LPTS-AILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 38 p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r-~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
+.+.+++|+|..+.+.+....-+...+ .|+.|+++|| +||| +.++.|.+..++...+.+.. .........+..
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~-p~~~~~~~~~~~ 112 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT-PDFGATGKIIYA 112 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC-CCCCcchHHHHH
Confidence 446888999999999977777766666 9999999999 7774 55556767666666533221 111111223445
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDI 162 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l 162 (263)
++...+.+.+.+....+-.+...|+.+ ++|.+..+.-..+..+|+.+++.+
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555566666677777788888775 568888888776666666666543
No 180
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.86 E-value=1.7e-07 Score=83.11 Aligned_cols=130 Identities=15% Similarity=0.131 Sum_probs=95.2
Q ss_pred hchHHHHHHcC-CCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccC-CCchH--H
Q 045446 35 NYSDALKSLMA-LTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKI-HPLPY--W 109 (263)
Q Consensus 35 ~~~p~l~~~~~-~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~-~~~~~--~ 109 (263)
.|.+.+-++.| .+.+..+...+...+.-.. -...+++..|+|.|+++.++.+..++=..+. ... ++... .
T Consensus 228 ~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~-----a~~~~~~~~~~~ 302 (400)
T PF03825_consen 228 TFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY-----AYFSDPWPFIVA 302 (400)
T ss_pred HHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-----HHhcCCcHHHHH
Confidence 33354555555 6766666554454555555 6788999999999999999999888777633 222 22111 1
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHh-hhhhHHHHHHHHHHHhhCC
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKG-YVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~-~~~lg~~i~~~l~~~l~~~ 169 (263)
.......++|+.-+..+.++..++.+..| +.|+++.|+..+ ..|+|..++..++|.+.+.
T Consensus 303 ~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 303 LQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 12233567899999999999999999999 559999999865 5789999999999999876
No 181
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.85 E-value=2.6e-07 Score=79.20 Aligned_cols=144 Identities=16% Similarity=0.092 Sum_probs=91.8
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 045446 39 ALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCM 117 (263)
Q Consensus 39 ~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (263)
.+-+++|++.+|...+.........+ +++.|.++||+|||+.-+.-+++..+.++ .... + +++.++++|++
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-----~k~~-~--~~~~L~~GRvl 130 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-----TKHS-S--NYPVLLLGRVL 130 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-----HHhc-c--ccHHHHHHHHH
Confidence 34467999999999977777777666 99999999999999999998888887777 4332 2 46889999999
Q ss_pred HhhchhhhhhhHHHHHh-hh----cCCC-CCchHHHHH-hhhhhHHHHHHHHHHHhhCC-C-hhHHHHHHHHHHHHHHHH
Q 045446 118 GGNSTTWMNTAVLVTCM-RN----FPKN-RGPVSGILK-GYVGLSTAIFTDICTALFSS-K-PSAFLLILAIVPAVICLT 188 (263)
Q Consensus 118 ~g~g~~~~~~~~~~~~~-~~----fp~~-rg~~~gi~~-~~~~lg~~i~~~l~~~l~~~-~-~~~~~~~~~~~~~~~~~~ 188 (263)
.|++.+..+++-=+.+. |. ||++ .+...+... ..+++-++....+...+.+. + ....++..+.+..+++.+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 99999988776544333 22 2211 122222122 12233334444455554443 1 234556666555555444
Q ss_pred HH
Q 045446 189 AV 190 (263)
Q Consensus 189 ~~ 190 (263)
..
T Consensus 211 ~I 212 (354)
T PF05631_consen 211 LI 212 (354)
T ss_pred HH
Confidence 43
No 182
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.84 E-value=2.6e-08 Score=86.63 Aligned_cols=133 Identities=14% Similarity=-0.024 Sum_probs=86.0
Q ss_pred cchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccCh-HHHHHH-HH-HHHHHHHHHHHHHHhccCCCc
Q 045446 32 TFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPT-SAILII-GS-LEGLIGYGVQWLVVSEKIHPL 106 (263)
Q Consensus 32 ~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~-g~-~~~~~g~~~~~~~~~~~~~~~ 106 (263)
.+..+.|.+ ++++|.++.+.++......++..+ .++.|++.||.++ |+.... .. .....+.. .....+..
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 308 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL-----VYWLNPAA 308 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-----HHhcCcch
Confidence 344455654 677899999999977777777777 8999999998643 332221 11 11111111 11111111
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+.+...+..++.|.......+.......|.+| ++||++.|+.+....+|+.++|.+.+.+.+.
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh
Confidence 22334444555555444444455667789998 6799999999999999999999999988875
No 183
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.2e-07 Score=76.95 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=92.0
Q ss_pred HH-HHHHcCCCHHHHHH-HHHHHHHhhhhhhHHHhhhcccChHHHHHHHHHH-HHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 38 DA-LKSLMALTQLQLNN-LSVAKDVGKAFGLLSGLASDRLPTSAILIIGSLE-GLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 38 p~-l~~~~~~s~~~~~~-i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~-~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
|. +++.+|+|+.+.+. .++.+.+.....|+.|.++||+|++...+....+ ...+--.+ .+ +.+.=+..
T Consensus 288 ~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l-----~F----t~lsPy~~ 358 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL-----FF----TFLSPYTS 358 (459)
T ss_pred HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhH-----Hh----hhccHHHH
Confidence 54 58889999999888 5666666666699999999999998776665443 33333211 11 11223456
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcCC-CCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFPK-NRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp~-~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
..+.|...++...+....+....|| +-|++.|..++.+++|-++.|.+.+.+.++
T Consensus 359 m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 359 MTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred HHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 6778887777766677788888894 589999999999999999999999988876
No 184
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.82 E-value=5.8e-07 Score=80.40 Aligned_cols=157 Identities=14% Similarity=0.070 Sum_probs=108.3
Q ss_pred CCCchhHHHHHHHHHHHHhhCC-ccc-chhchHHHHH-HcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccCh-HHHHH
Q 045446 8 TLPAAKWLGFVTAIWVQATCGN-NYT-FSNYSDALKS-LMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPT-SAILI 82 (263)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~p~l~~-~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~ 82 (263)
+.++.+|+.+..........+. .+. ....-|++++ |.+-+++..||+.....++..+ .|..|+...|.+. |+-++
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 4456677765555444433322 222 2222355533 5888999999988889999888 9999999999996 77788
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHH
Q 045446 83 IGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDI 162 (263)
Q Consensus 83 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l 162 (263)
.|.++..+|.++-. ++...+++ .-+.++++|++.|+|.|.....=........+++|-|+++....++-+|..+||.+
T Consensus 107 ~s~ii~~~g~llY~-~l~~~~~~-~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYL-ALAYVPNG-VKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHH-HHHhcccc-hHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 88888888887441 12233332 45778889999999987664333344444567889999999888777888888777
Q ss_pred HHHh
Q 045446 163 CTAL 166 (263)
Q Consensus 163 ~~~l 166 (263)
...+
T Consensus 185 q~~f 188 (488)
T KOG2325|consen 185 QLAF 188 (488)
T ss_pred HHHH
Confidence 6554
No 185
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.81 E-value=1.1e-07 Score=95.11 Aligned_cols=134 Identities=15% Similarity=-0.058 Sum_probs=100.4
Q ss_pred hchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHh------------
Q 045446 35 NYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVS------------ 100 (263)
Q Consensus 35 ~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~------------ 100 (263)
.+.|.+ ++.+|.+..+.+++.....++..+ .+..|+++||.++++.+..+.++.+++...+.....
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSI 325 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccch
Confidence 345665 666899999999988888888888 899999999988777766666555544432221100
Q ss_pred -ccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 101 -EKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 101 -~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
.+....+.|.+.+..++.|++.+...+...+.+.+..| ++||+++|+.+....++..+++.+.+.+.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 326 LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000234666777888899999998889999999999 679999999999998999999988887764
No 186
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.79 E-value=6e-08 Score=85.37 Aligned_cols=143 Identities=12% Similarity=0.097 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhh
Q 045446 49 LQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNT 127 (263)
Q Consensus 49 ~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~ 127 (263)
+..+.+.+...+.-+. ..+..++.+|+|+|+.++++.+..++=.. .++.+++ .+.+...+.+.|+-.+....
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~-----~~~~~~~--~~~i~~~klLH~~e~~l~lv 331 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRII-----GSGFATN--PWVISLIKLLHALEFPLLLV 331 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-----HHHT--S--HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHH-----HHhhhcc--hHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555 66889999999999999999999888888 7777764 47788889999999999999
Q ss_pred hHHHHHhhhcCCC-CCchHHHH-HhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045446 128 AVLVTCMRNFPKN-RGPVSGIL-KGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 128 ~~~~~~~~~fp~~-rg~~~gi~-~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
+...++.+.||+| ..+...+. +...++|..+.+++.|.+.|+ +.+..+++++.......++..+.++++++
T Consensus 332 a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 332 AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 9999999999954 56777664 567789999999999999887 55666667776666666666666655443
No 187
>PRK09848 glucuronide transporter; Provisional
Probab=98.78 E-value=7.9e-08 Score=86.50 Aligned_cols=122 Identities=16% Similarity=0.071 Sum_probs=90.8
Q ss_pred HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHh
Q 045446 41 KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGG 119 (263)
Q Consensus 41 ~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 119 (263)
++.+|.++....+......++..+ .++.+++.||+|+|+++..|.++..++.+.+.. .+..+.+.+++...+.|
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~-----~~~~~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW-----VSVWSLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-----cCchhHHHHHHHHHHHH
Confidence 455777666555544444555555 889999999999999999999888887764432 22224566666678889
Q ss_pred hchhhhhhhHHHHHhhhcC-C-------CCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 120 NSTTWMNTAVLVTCMRNFP-K-------NRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 120 ~g~~~~~~~~~~~~~~~fp-~-------~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
+|.+...+...+...+..| + ++|...|..+....+|.++++.+.+.++
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888877765 2 2488889998888899999988887765
No 188
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.78 E-value=4.9e-07 Score=79.41 Aligned_cols=144 Identities=11% Similarity=0.030 Sum_probs=85.5
Q ss_pred CCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccCh---HHHHHH-HHHHHHHHHHHHHHHHhccC
Q 045446 28 GNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLPT---SAILII-GSLEGLIGYGVQWLVVSEKI 103 (263)
Q Consensus 28 ~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~---r~~~~~-g~~~~~~g~~~~~~~~~~~~ 103 (263)
...|.+..+.|++.++.|+|.+ .+.......+... +-.++++||..| |+.... .....++... ..+..
T Consensus 206 ~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~--~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~-----~~~~~ 277 (368)
T TIGR00903 206 ALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGL--IGVAVIPDRVARAGLRSIYIRAAALLIAAFFL-----ALAFE 277 (368)
T ss_pred HHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHH--HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHH-----HHHHc
Confidence 4455667788998777788865 3443222222222 234677777754 333332 2222222222 11222
Q ss_pred CCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHH
Q 045446 104 HPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVP 182 (263)
Q Consensus 104 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~ 182 (263)
.+ . +.......+.+++....++....+..|.+| +.||+++|+.+....+++..+|.+.+.+.. +....+...+...
T Consensus 278 ~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~ 354 (368)
T TIGR00903 278 LN-R-LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAILI 354 (368)
T ss_pred cc-c-HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHH
Confidence 22 1 223334455666666666667788899999 579999999999999999999998887774 4344444444433
No 189
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.78 E-value=6e-07 Score=80.05 Aligned_cols=144 Identities=9% Similarity=-0.045 Sum_probs=87.9
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.+.+..+.|.+ ++.+|.++.+.++.......+..+ ....+++.+|.++++....+.....++...+..... ..++ +
T Consensus 234 ~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~-~~~~-~ 311 (413)
T PRK15403 234 MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNL-LWPH-V 311 (413)
T ss_pred HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHH-Hccc-c
Confidence 34555566765 666799999999977666666666 677777665544444433333333334332221110 1122 2
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFL 175 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~ 175 (263)
++..++..++.++|.+...+.......+..+..+|++.++.+.....+..+++...+.+.+.+....+
T Consensus 312 ~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 379 (413)
T PRK15403 312 WLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPF 379 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 33345667778888888877776544333334589999999888878888888888877655333333
No 190
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.77 E-value=1.1e-08 Score=88.11 Aligned_cols=125 Identities=19% Similarity=0.142 Sum_probs=94.9
Q ss_pred cchhchHHH-HHHcCCC-HHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 32 TFSNYSDAL-KSLMALT-QLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 32 ~~~~~~p~l-~~~~~~s-~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
.+..+.|.+ ++++|.+ ..+.+.+.....+...+ .++.|++.||+|+|+..........++....... ...+ +.
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~ 299 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLL--PFSS--SP 299 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCS--HHHC--HH
T ss_pred HhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--HHhh--hH
Confidence 356667776 8889999 78888866666666666 8999999999999887777776666655532111 1111 22
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFT 160 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~ 160 (263)
+..+...++.|++.+...+.......+.+| ++||++.|+.+...++|+.++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 444556777888899999999999999998 6799999999999999998876
No 191
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.76 E-value=3.5e-08 Score=85.93 Aligned_cols=122 Identities=18% Similarity=0.155 Sum_probs=82.2
Q ss_pred ccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH
Q 045446 31 YTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY 108 (263)
Q Consensus 31 ~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (263)
+.+..+.|.+ ++.+|.++.+.+++.....+...+ .++.|++.||+|+|+....+......+...+... ..++.+.
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 318 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLG---LVSPLSL 318 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhc---CCCcchH
Confidence 3444455554 667899999999877666666666 8899999999999988888777666655533221 1111023
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLS 155 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg 155 (263)
+.......+.+++.|...+.......+.+|++||+++|+.+....+|
T Consensus 319 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 319 AVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 33333344444455555556667778888989999999998877665
No 192
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.69 E-value=3.6e-07 Score=81.78 Aligned_cols=131 Identities=12% Similarity=0.070 Sum_probs=92.6
Q ss_pred hHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhc----ccChHHHHH-HHHHHHHHHHHHHHHH-HhccCCCchHH
Q 045446 37 SDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASD----RLPTSAILI-IGSLEGLIGYGVQWLV-VSEKIHPLPYW 109 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~D----r~G~r~~~~-~g~~~~~~g~~~~~~~-~~~~~~~~~~~ 109 (263)
.+.+.+..|+++...+.+....-+..++ .|+.|+++| |+||||-.+ .|.+..+++.++++.. -.+........
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 4556788899999999976666666666 999999999 899765555 5777788777755422 11111111223
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.+.+..++..++......+..+...|..+ ++|.+..+....+..+|..+.+.+...+.
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34555555688888888888889999887 46999999998887777765555555554
No 193
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.68 E-value=4.1e-07 Score=79.24 Aligned_cols=162 Identities=14% Similarity=0.107 Sum_probs=102.7
Q ss_pred CCcccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc--ChHHHHHHHHH-HHHHHHHHHHHHHhcc
Q 045446 28 GNNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL--PTSAILIIGSL-EGLIGYGVQWLVVSEK 102 (263)
Q Consensus 28 ~~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~~~g~~-~~~~g~~~~~~~~~~~ 102 (263)
..-|....+.|.+ .|..|+|..+.++..+.+-++... .++.||++||. |||....+.+. ...++....+ .
T Consensus 266 ivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w-----~ 340 (448)
T COG2271 266 VVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYW-----L 340 (448)
T ss_pred HHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH-----c
Confidence 3456667777875 778999999999988888888888 89999999996 67755544443 3333333222 2
Q ss_pred CCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCC-CCchHHHHHhhhhh-HHHHHHHHHHHhhCC-ChhHHHHHHH
Q 045446 103 IHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKN-RGPVSGILKGYVGL-STAIFTDICTALFSS-KPSAFLLILA 179 (263)
Q Consensus 103 ~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~-rg~~~gi~~~~~~l-g~~i~~~l~~~l~~~-~~~~~~~~~~ 179 (263)
.++.+++...+..++.|+-.-...-..-....|.-|++ -|++.|+...+.-+ |++.+....+.+.+. +|...+..+.
T Consensus 341 ~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~ 420 (448)
T COG2271 341 APNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLS 420 (448)
T ss_pred CCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHH
Confidence 23334455555566666544443333344556777854 89999999998888 777776677777666 4444444443
Q ss_pred HHHHHHHHHHHhhcc
Q 045446 180 IVPAVICLTAVLFLH 194 (263)
Q Consensus 180 ~~~~~~~~~~~~~~~ 194 (263)
+...+..+......+
T Consensus 421 ~~a~l~~lll~~~~~ 435 (448)
T COG2271 421 IAALLAILLLLPVWN 435 (448)
T ss_pred HHHHHHHHHHHHHHh
Confidence 333333333333333
No 194
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.68 E-value=5.3e-07 Score=81.80 Aligned_cols=126 Identities=12% Similarity=0.103 Sum_probs=83.2
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhc----ccCh-HHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 38 DALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASD----RLPT-SAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 38 p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~D----r~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
..+.+.+|++..+.+.+....-+.-.+ .|+.|+++| |+|| |+-++.|....+++..+++.. .+..++..++.+
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~-p~~~~~~~~~~~ 109 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA-HLFEGTAQYVFV 109 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-CCCCccHHHHHH
Confidence 445777899999999966666666555 999999999 6698 556666777777766544321 111111123334
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
++...+.+++......+..+...|.-+ ++|.+..+....+..+|+.+.+.+..
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~ 164 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTL 164 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556677777777788888888774 67999888866666666555544433
No 195
>PRK09848 glucuronide transporter; Provisional
Probab=98.67 E-value=1.3e-06 Score=78.62 Aligned_cols=114 Identities=11% Similarity=0.014 Sum_probs=72.7
Q ss_pred hHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc----ChHHHH-HHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 37 SDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL----PTSAIL-IIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 37 ~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~----G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
.+.+++..|++..+.+.+.....+...+ .|+.|+++||. ||||.. ..+.+...+....++....+..++...+.
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 3567888999999999988777777777 99999999996 766644 55655555444433211112222222233
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHh
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKG 150 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~ 150 (263)
.+....+.+++.+...++..+...+..+ ++|.+..+.-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~ 153 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGI 153 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHH
Confidence 3444556677777777766666555443 568877665543
No 196
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.8e-07 Score=84.03 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=110.2
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
+...++.|.+.++.++++++.+.+.....+...+ -+..|+++|+...++..+....+...+...+ .+...+ +++
T Consensus 315 ~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~---~~p~~~--~~~ 389 (509)
T KOG2504|consen 315 NVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARL---FLPFAT--TYV 389 (509)
T ss_pred HHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHH---HHHHhc--cHH
Confidence 3455677888889999999999987777777777 8999999999985444444444333343332 333333 567
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLILAIVP 182 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~ 182 (263)
.++..-.+.|+..|........++.+..+ ++-..+.|+...+.+++..++|++.+.+.+. ++...++..+...
T Consensus 390 ~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~ 465 (509)
T KOG2504|consen 390 GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCF 465 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHH
Confidence 88888888999888887777788999998 7789999999999999999999999977665 3344444444443
No 197
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.63 E-value=4.1e-07 Score=82.86 Aligned_cols=114 Identities=8% Similarity=0.023 Sum_probs=84.1
Q ss_pred HHHHHHHHhhhh-hhHHHhhhcccChHH-------HHHHHHHHHHHHHHHHHHH---HhccCCCchHHHHHHHHHHHhhc
Q 045446 53 NLSVAKDVGKAF-GLLSGLASDRLPTSA-------ILIIGSLEGLIGYGVQWLV---VSEKIHPLPYWQMCIFLCMGGNS 121 (263)
Q Consensus 53 ~i~~~~~~~~~~-~~~~G~l~Dr~G~r~-------~~~~g~~~~~~g~~~~~~~---~~~~~~~~~~~~l~~~~~l~g~g 121 (263)
++.....+...+ .|+.|++.||.++|+ -+.+|.++.+++...+... ........+.|.+....++.|+|
T Consensus 313 ~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~G 392 (489)
T PRK10207 313 SFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG 392 (489)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 333334344444 888999999999987 3667777766665433211 11111123557677788999999
Q ss_pred hhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 122 TTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 122 ~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
.+...++....+.+..| +.+|.++|+.....++|+.++..+.+..
T Consensus 393 e~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 393 ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999 5699999999999999999998888655
No 198
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.62 E-value=1.2e-05 Score=70.27 Aligned_cols=139 Identities=13% Similarity=0.089 Sum_probs=97.1
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccC-----hHHHHHHHHH-HHHHHHHHHHHHHhccCC-------Cc
Q 045446 40 LKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLP-----TSAILIIGSL-EGLIGYGVQWLVVSEKIH-------PL 106 (263)
Q Consensus 40 l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~-~~~~g~~~~~~~~~~~~~-------~~ 106 (263)
+..|++++..-.+.......+..-..+..|..+|+++ ||.-++.+.. ..+.+...+.....-... +.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 4567888888877755555555566889999999999 8877776654 444444433222222222 22
Q ss_pred hHHHHH--HHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHH
Q 045446 107 PYWQMC--IFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLIL 178 (263)
Q Consensus 107 ~~~~l~--~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~ 178 (263)
..+... +...+.|+|.+...++..+...|.-| |+|+++.++.....-+|..+...+.+.++++ ...+..-.+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 233222 33666788888889999999999998 6799999999988888888988899988887 333433333
No 199
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.60 E-value=7.3e-07 Score=79.79 Aligned_cols=125 Identities=13% Similarity=0.124 Sum_probs=92.3
Q ss_pred hHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 37 SDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 37 ~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
.+.+ +...|.+ +..+.+.....+...+ .++.++++||+|+|+++..+.++.+++...++.... .+.+.+++.
T Consensus 248 ~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~ 321 (428)
T PF13347_consen 248 LPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-----GSPWLVLIL 321 (428)
T ss_pred HHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh-----hhHHHHHHH
Confidence 3444 4445555 5556666666777666 899999999999999999999999998886654421 244777788
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcC-C-------CCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFP-K-------NRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp-~-------~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
..+.|++.+..+....+...|..+ + +.|...|.......++..+++.+.+.++
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 889999999998888888888776 2 1366677777666777777777666554
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.56 E-value=3.2e-06 Score=72.41 Aligned_cols=149 Identities=15% Similarity=0.056 Sum_probs=109.9
Q ss_pred HHHHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc-ChHHHHHHHHHHHHHHHHHHHHHH
Q 045446 22 WVQATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL-PTSAILIIGSLEGLIGYGVQWLVV 99 (263)
Q Consensus 22 ~~~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~~g~~~~~~g~~~~~~~~ 99 (263)
++...+...|+.-.+.|.+-.|.|+|.++.++......+.... ++....+.+|. .+|+......+...+|...+++.
T Consensus 216 fmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~- 294 (395)
T COG2807 216 FMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA- 294 (395)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh-
Confidence 3334455677777888999999999999999965555555554 88888888865 56788888888888888865432
Q ss_pred hccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHH
Q 045446 100 SEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLL 176 (263)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~ 176 (263)
+....+ ...++.|+|.|..++.+...+....+ ++-++-.|+.+...-+=++.+|.+.+.+.|. ++|....
T Consensus 295 ----P~~~~~---lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~ 367 (395)
T COG2807 295 ----PGQLPI---LWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPL 367 (395)
T ss_pred ----hhhHHH---HHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHH
Confidence 221111 12478999999999999998888775 3467778888888888888999999998876 5555444
Q ss_pred HH
Q 045446 177 IL 178 (263)
Q Consensus 177 ~~ 178 (263)
..
T Consensus 368 ~~ 369 (395)
T COG2807 368 VL 369 (395)
T ss_pred HH
Confidence 33
No 201
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.56 E-value=4.2e-07 Score=80.08 Aligned_cols=152 Identities=17% Similarity=0.158 Sum_probs=84.5
Q ss_pred chHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH--HHHHHHHHHHHhccCCCchHHHHH
Q 045446 36 YSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG--LIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 36 ~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~--~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
+...++++.|+|.+|.+.+.....+...+ +|+.|.+.||.|.||-++...... ..+.+..+....-... + ..
T Consensus 30 ~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~--n---~~ 104 (412)
T PF01306_consen 30 FPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQS--N---FW 104 (412)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHT--T----H
T ss_pred HHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H---HH
Confidence 33445667899999999988888877777 999999999999776555443322 2233222111000001 1 23
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhc----CCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHH
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNF----PKNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLT 188 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~f----p~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (263)
+...+.|+..+..+.+..... |.+ .++.+.-.|-.-...++|-+++..+.|.+.+.++. ..++++....++..+
T Consensus 105 lg~iig~i~l~~~f~~~~~~~-Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~-~~fwi~s~~~~il~l 182 (412)
T PF01306_consen 105 LGAIIGGIYLGLVFNAGVPLS-EAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNINPN-IIFWIASAAAIILLL 182 (412)
T ss_dssp HHHHHTTTTTTTTTTTHHHHH-HHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccchHH-HHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCcc-HHHHHHHHHHHHHHH
Confidence 334455665566555555544 333 23456666777778888999999999988764332 333333333333333
Q ss_pred HHhhcc
Q 045446 189 AVLFLH 194 (263)
Q Consensus 189 ~~~~~~ 194 (263)
.....|
T Consensus 183 ll~~~~ 188 (412)
T PF01306_consen 183 LLLLLK 188 (412)
T ss_dssp HHHSS-
T ss_pred HHHHcC
Confidence 334444
No 202
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.55 E-value=2.5e-06 Score=78.03 Aligned_cols=99 Identities=13% Similarity=-0.008 Sum_probs=77.7
Q ss_pred HHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhcc--CCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCc
Q 045446 67 LSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEK--IHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGP 143 (263)
Q Consensus 67 ~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~--~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~ 143 (263)
..+++.||+++++.+.+|.++.++++..+....... ....+.+.+....++.|+|.....|.....+.+.-| +.||+
T Consensus 339 ~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~ 418 (500)
T PRK09584 339 IYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGF 418 (500)
T ss_pred HHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHH
Confidence 347788888888999999999999988664432210 111235667778999999999999999999999999 56999
Q ss_pred hHHHHHhhhhhHHHHHHHHHHH
Q 045446 144 VSGILKGYVGLSTAIFTDICTA 165 (263)
Q Consensus 144 ~~gi~~~~~~lg~~i~~~l~~~ 165 (263)
++|.......+|+.++.++.+.
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANL 440 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988887888888777753
No 203
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.51 E-value=7.3e-06 Score=75.20 Aligned_cols=136 Identities=13% Similarity=0.024 Sum_probs=85.5
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCC------C
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIH------P 105 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~------~ 105 (263)
...|.+++.++.+.+... .+.+....+...+ ..++..+.||+|||+.++.|...+.++.+.+......... .
T Consensus 314 ~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~ 392 (513)
T KOG0254|consen 314 VFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKG 392 (513)
T ss_pred EEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 445667777777776443 3333344444444 5667899999999999999999999998877655443221 1
Q ss_pred chHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 106 LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 106 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.....+....+..........+....+..|.|| +-|+++.++..........+.........+.
T Consensus 393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~ 457 (513)
T KOG0254|consen 393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEA 457 (513)
T ss_pred hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111122222222222222234455578899999 6699999999888877776665555544443
No 204
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.48 E-value=1.5e-06 Score=80.10 Aligned_cols=135 Identities=15% Similarity=0.161 Sum_probs=94.7
Q ss_pred cccchhchHHH-HHHcCCCH---HHHHHHHHHHHHhhhh-hhHHHhhhcccCh-HHHHHHHHHHHHHHHHHHHHHHhccC
Q 045446 30 NYTFSNYSDAL-KSLMALTQ---LQLNNLSVAKDVGKAF-GLLSGLASDRLPT-SAILIIGSLEGLIGYGVQWLVVSEKI 103 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~---~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (263)
.|....+-|+. .+-++-|. .+.++.+.....+..+ +.+.|.+..+++| |..++++.+...++...+. ....
T Consensus 326 ~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama---~~~~ 402 (599)
T PF06609_consen 326 FFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMA---AVRP 402 (599)
T ss_pred HHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHH---HccC
Confidence 44555555664 44565554 3567777778888777 7788999988876 5666677666655444332 2222
Q ss_pred CCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 104 HPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 104 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
++. ...+.+.++.|+|.|...........-..| ++-|++.|+..+...+|++++..++..++.+
T Consensus 403 ~n~--~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n 467 (599)
T PF06609_consen 403 DNK--NAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTN 467 (599)
T ss_pred CCc--chHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 333 334566788899999887777777666678 6689999999999999999999988877654
No 205
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.48 E-value=1.9e-06 Score=78.16 Aligned_cols=127 Identities=10% Similarity=-0.063 Sum_probs=97.7
Q ss_pred HHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccC--C-CchHHHHHHHHHH
Q 045446 42 SLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKI--H-PLPYWQMCIFLCM 117 (263)
Q Consensus 42 ~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~--~-~~~~~~l~~~~~l 117 (263)
+.+|+|+++.+.+.....++... ....+++.+|++.|+++.++.++..++............ . -.+.+.+.....+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 56899999999977777777777 789999999999999999999988887753211111110 0 0111334445778
Q ss_pred HhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 118 GGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 118 ~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
.+++.+....+....+++..| +++|+..++.++..++|..+++.+++.+.+
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999999 569999999999999999999987777654
No 206
>PRK11462 putative transporter; Provisional
Probab=98.46 E-value=1.5e-05 Score=72.08 Aligned_cols=130 Identities=11% Similarity=-0.070 Sum_probs=86.0
Q ss_pred hhchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc----cChHHHHH-HHHHHHHHHHHHHHHHHhccCCCc
Q 045446 34 SNYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR----LPTSAILI-IGSLEGLIGYGVQWLVVSEKIHPL 106 (263)
Q Consensus 34 ~~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r~~~~-~g~~~~~~g~~~~~~~~~~~~~~~ 106 (263)
+.|... +.+..|+++...+.+....-+--++ -|+.|+++|| +||||-.+ .|.+..+++.++++.. ...+.+.
T Consensus 29 ~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~-p~~s~~~ 107 (460)
T PRK11462 29 MLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST-PDLSMNG 107 (460)
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC-CCCCcch
Confidence 344443 5677999999999966665555555 8999999996 68865555 5656777776654422 1111111
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
....+.+...+..++......+-.+...|.-+ +||.+..++-..+..+|..+++.+..
T Consensus 108 ~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 108 KMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13334444555677777777777777777775 57999999988777777666655543
No 207
>PRK09669 putative symporter YagG; Provisional
Probab=98.43 E-value=7.7e-06 Score=73.56 Aligned_cols=111 Identities=12% Similarity=0.017 Sum_probs=75.8
Q ss_pred HHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHH
Q 045446 53 NLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLV 131 (263)
Q Consensus 53 ~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~ 131 (263)
.+.....+...+ .++.+++.||+|+|+.+..+.+...++..... ... ..+.+.+.+..++.|++.+...+...+
T Consensus 268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIF--FIP---PSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH--HhC---cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555 67889999999999999988776554333221 111 123455666678889999988888888
Q ss_pred HHhhhcC-CC-------CCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 132 TCMRNFP-KN-------RGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 132 ~~~~~fp-~~-------rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
.+.|..| ++ .|...|.......+|.++++.+.+.+++
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888775 11 2445677777777888888888777654
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.42 E-value=2.3e-05 Score=69.55 Aligned_cols=97 Identities=11% Similarity=0.076 Sum_probs=63.0
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccC-hHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLP-TSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMC 112 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G-~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (263)
.|.|.+-++.|+|.+|.+.+.....+...+ .++.|.++||++ +||++.+..++.++..... ...+ +++.++
T Consensus 23 p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~-----~~~~--~f~~~~ 95 (400)
T PF03825_consen 23 PYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL-----AFSS--SFWWLF 95 (400)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH-----HHhc--cHHHHH
Confidence 344566777899999999988888888887 889999999986 5677666555544433321 1122 345555
Q ss_pred HHHHHHhhchhhhhhhHHHHHhhhcC
Q 045446 113 IFLCMGGNSTTWMNTAVLVTCMRNFP 138 (263)
Q Consensus 113 ~~~~l~g~g~~~~~~~~~~~~~~~fp 138 (263)
....+..+......+..-++..+.-.
T Consensus 96 ~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 96 VIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 55555555555555555555555544
No 209
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.42 E-value=2.9e-07 Score=76.27 Aligned_cols=152 Identities=14% Similarity=0.113 Sum_probs=108.1
Q ss_pred CchhHHHHHHHHHHHHhhCCcccch---hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc-cChHHHHHHH
Q 045446 10 PAAKWLGFVTAIWVQATCGNNYTFS---NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR-LPTSAILIIG 84 (263)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~~g 84 (263)
..+|...++.+ +.+..|+.+.+. ....+++.+.+++.++..++.+.++.-+.+ ..++|++.|| +|.|...++-
T Consensus 39 l~hr~m~lv~m--c~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 39 LGHRFMALVFM--CLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhhHHHHHHHH--HHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 34555444433 233445554443 222334556677777788888888888887 8899999998 5777777777
Q ss_pred HHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHH
Q 045446 85 SLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDIC 163 (263)
Q Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~ 163 (263)
++...+|.+.+ .+|... ..+|.+..+|++.|+|.-....+...+...||. ++-+.+.|+......+|+.+--.+.
T Consensus 117 ~~fv~~GqliF---a~Ggi~-~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm 192 (459)
T KOG4686|consen 117 CIFVFLGQLIF---AAGGIS-HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLM 192 (459)
T ss_pred HHHHHHHHHHH---HhchHH-HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeec
Confidence 77777777755 333222 267999999999999998888888889999998 7899999999988888887654444
Q ss_pred HHhh
Q 045446 164 TALF 167 (263)
Q Consensus 164 ~~l~ 167 (263)
+.+.
T Consensus 193 ~~ly 196 (459)
T KOG4686|consen 193 PFLY 196 (459)
T ss_pred HHHH
Confidence 4443
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.40 E-value=4.6e-06 Score=75.69 Aligned_cols=120 Identities=9% Similarity=-0.044 Sum_probs=82.2
Q ss_pred CHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhh
Q 045446 47 TQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWM 125 (263)
Q Consensus 47 s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~ 125 (263)
+.++.+++.....+...+ .++.+++.||+|+|+.+..+..+..++....... +..++.+.+.+++...+.|++.+..
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~g~~~~~~ 341 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLM--GLAAPHNALLIVIAGILLNIGTALF 341 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--hccCchhHHHHHHHHHHHHHHHHHH
Confidence 445555555555455555 7889999999999999998888766666544322 1111223455666677788888888
Q ss_pred hhhHHHHHhhhcC-C--CC-----CchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 126 NTAVLVTCMRNFP-K--NR-----GPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 126 ~~~~~~~~~~~fp-~--~r-----g~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
.+...+.+.|..| + +. |...|......-+|.++++.+.+.+++
T Consensus 342 ~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 342 WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888754 1 12 447788777777888888888777653
No 211
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.40 E-value=8.2e-07 Score=76.19 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=82.8
Q ss_pred hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCc
Q 045446 65 GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGP 143 (263)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~ 143 (263)
.++.+++.||+|||+++....+++++..++.... ...+.....++.+|++.. ..+.+++++.-|.+| .-|++
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~iflfll~~c---~~rn~~tvllf~arafis----g~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGIFLFLLTTC---KTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh---cCcchhHHHHHHHHHHHh----chheEEEEecCcccchhhhhc
Confidence 5789999999999999999999988887765433 222222233555666543 334466778889999 56999
Q ss_pred hHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHhhccc
Q 045446 144 VSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLTAVLFLHE 195 (263)
Q Consensus 144 ~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (263)
+.|.......+|+.+.|.+. +..+ ...-..+...... +++.++.++.+-
T Consensus 471 gvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~-ilagIavcffPi 520 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALF-ILAGIAVCFFPI 520 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHH-HHHHHHheeeee
Confidence 99999999999999988887 4333 3333344444433 445555555543
No 212
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.40 E-value=1.1e-05 Score=66.88 Aligned_cols=130 Identities=24% Similarity=0.187 Sum_probs=95.4
Q ss_pred hhchHHHHHHcCCCH--HHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH
Q 045446 34 SNYSDALKSLMALTQ--LQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQ 110 (263)
Q Consensus 34 ~~~~p~l~~~~~~s~--~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (263)
....+.+.++.+.+. .+.++......+.... .++.|++.||+|||+.+..+......+.. .+....+...+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 96 (338)
T COG0477 22 SPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTL-----LLALAPNVGLAL 96 (338)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHH-----HHHhCccchHHH
Confidence 344566667766665 4777777777777777 68999999999999888888776444433 222222224577
Q ss_pred HHHHHHHHhhchhhhhhhHHHHHhhhcCC--CCCchHHHHHh-hhhhHHHHHHHHHHHhhC
Q 045446 111 MCIFLCMGGNSTTWMNTAVLVTCMRNFPK--NRGPVSGILKG-YVGLSTAIFTDICTALFS 168 (263)
Q Consensus 111 l~~~~~l~g~g~~~~~~~~~~~~~~~fp~--~rg~~~gi~~~-~~~lg~~i~~~l~~~l~~ 168 (263)
+.+.|..+|++.+...+.......+.+|+ +|+...+.... ....+..+++.+.+.+..
T Consensus 97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 97 LLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999996 68888888877 466677777755555443
No 213
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.36 E-value=7.3e-08 Score=88.45 Aligned_cols=135 Identities=18% Similarity=0.062 Sum_probs=3.0
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHH--HhccC------
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLV--VSEKI------ 103 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~--~~~~~------ 103 (263)
.+...+++++.|+++.+|.+++...+.++..+ .++..+..+|..|-|.+-.|.++.++|++++.+= ..+..
T Consensus 22 ~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~ 101 (539)
T PF03137_consen 22 VNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEAS 101 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccc
Confidence 34555789999999999999999999999988 8888999999888888888888888888755320 00100
Q ss_pred -----------------------------------CCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHH
Q 045446 104 -----------------------------------HPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGI 147 (263)
Q Consensus 104 -----------------------------------~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi 147 (263)
.+..++.+++++++.|+|....++...+++-|+.+ ++-+..+|+
T Consensus 102 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi 181 (539)
T PF03137_consen 102 NSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGI 181 (539)
T ss_dssp --------------------------------------------------SSS---------------------------
T ss_pred ccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhh
Confidence 00123556677999999999999999999999998 567899999
Q ss_pred HHhhhhhHHHHHHHHHHHhh
Q 045446 148 LKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 148 ~~~~~~lg~~i~~~l~~~l~ 167 (263)
..+...+|+++|-.+++..+
T Consensus 182 ~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 182 LYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp --------------------
T ss_pred hhHHhhccHHHHHHHHHHHH
Confidence 99999899988877776554
No 214
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.35 E-value=1.4e-05 Score=72.66 Aligned_cols=141 Identities=9% Similarity=-0.036 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhhhh-hhH----HHhhhcc-cChHHHH--HHHHHHHHHHHHHHHHHHhccC--CCchHHHHHHHHHHHhh
Q 045446 51 LNNLSVAKDVGKAF-GLL----SGLASDR-LPTSAIL--IIGSLEGLIGYGVQWLVVSEKI--HPLPYWQMCIFLCMGGN 120 (263)
Q Consensus 51 ~~~i~~~~~~~~~~-~~~----~G~l~Dr-~G~r~~~--~~g~~~~~~g~~~~~~~~~~~~--~~~~~~~l~~~~~l~g~ 120 (263)
.+++.+...+...+ +|+ ..++.|| .+++... .+|.++.+++...+........ ...++|.+....++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 34444444444443 554 3456665 3344433 6788887777765543211100 12467888889999999
Q ss_pred chhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHh
Q 045446 121 STTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 121 g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
|.....+...+...+..| +.||+.+|+......+|..+++.+....... ++...+..+++...+++++...
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 5699999999999999999998888766544 4444555555555444444443
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.32 E-value=1.1e-05 Score=69.16 Aligned_cols=62 Identities=13% Similarity=0.004 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
+++.+++..++.|.|.+..++.++.++.+..| |++.+.+++.+.++++|..++|.+.+.+..
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~ 71 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLIL 71 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 56778888999999999999999999999988 678999999999999999999999998773
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.32 E-value=1.3e-05 Score=71.93 Aligned_cols=157 Identities=22% Similarity=0.290 Sum_probs=103.9
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccC-----hHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLP-----TSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYW 109 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (263)
...|.+++++|.+++|.+.+.....+.-.+-|+.|.++|-+. ||+=++++.++..++...... ...... +..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~-~~~~~~--s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL-LPASES--SAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh-cccccc--hhh
Confidence 345788999999999999988888888889999999999985 444445555555443432221 111111 234
Q ss_pred HHHHHHHHHhhchhhhhhhHHHHHhhhc---CCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHH
Q 045446 110 QMCIFLCMGGNSTTWMNTAVLVTCMRNF---PKNRGPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVPAVI 185 (263)
Q Consensus 110 ~l~~~~~l~g~g~~~~~~~~~~~~~~~f---p~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~~ 185 (263)
...+..++..+|....+..+=+...|.- |++||...+.......+|+.++..+.+.+.+. +.+..+.+.+..+.+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 4455567777888888888877777765 43477778888888888999988888888776 3333333334444443
Q ss_pred HHHHHhhcc
Q 045446 186 CLTAVLFLH 194 (263)
Q Consensus 186 ~~~~~~~~~ 194 (263)
.+......+
T Consensus 168 ~~~~~~~~~ 176 (433)
T PF03092_consen 168 LIVALFLLE 176 (433)
T ss_pred HHHHHHhhh
Confidence 333333333
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.31 E-value=2.9e-05 Score=69.20 Aligned_cols=126 Identities=8% Similarity=-0.029 Sum_probs=81.8
Q ss_pred hchHHHHHHc--CCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 35 NYSDALKSLM--ALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 35 ~~~p~l~~~~--~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
.+.+.+.++. +.+................+ .+.+|++.||+++|+++.+..+...+...... ..++ .. -
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~-----~~~~--~~-~ 324 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI-----FAGG--HV-G 324 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-----HcCC--hH-H
Confidence 4445544433 44444444333333344455 78999999999999998888777666655332 2222 12 2
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.....+.|...+.++|..++...+..++++..+.+...... +|+++.|++.+.+.|.
T Consensus 325 ~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~-~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 325 LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI-IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH-hccchHHHHHHHHHHH
Confidence 33445667778888899999999999866544333333333 8999999999998873
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.18 E-value=0.00011 Score=69.07 Aligned_cols=133 Identities=13% Similarity=0.005 Sum_probs=92.9
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHH-HHhhhhhhHHHhhhcc-cChHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAK-DVGKAFGLLSGLASDR-LPTSAILIIGSLEGLIGYGVQWLVVSEKIH-PLPYWQM 111 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~-~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~-~~~~~~l 111 (263)
.+...+.+.+|.++++...+...+ .+.....+++|+++|+ +|+++.+..+.++..+|..++......... .......
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 334556778999999888854444 4444558899999998 599999999999999998765432111000 0111234
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CC---CCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KN---RGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~---rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
+++..+.++|.|..-+...+...+.|+ ++ |-+...+.....++|+.+++.+...+-
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788889998899999999997 32 445566666677788888888877665
No 219
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=1.2e-08 Score=91.62 Aligned_cols=162 Identities=18% Similarity=0.114 Sum_probs=95.2
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHH-HHHhccCCC--chH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQW-LVVSEKIHP--LPY 108 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~-~~~~~~~~~--~~~ 108 (263)
...|.|.+.++.+.+.. ........+.... .+.+..+.||+|||++++.+....+++...+. ........+ .+.
T Consensus 272 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSI 349 (451)
T ss_pred ccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 44566777777777766 2222222233333 55667999999999999999888777766443 000111110 011
Q ss_pred HHHHHHHHHHhhchh-hhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCCh-hHHHHHHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTT-WMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKP-SAFLLILAIVPAVI 185 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~-~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~-~~~~~~~~~~~~~~ 185 (263)
. .++...+...+.+ ...+.......|.|| +.|+++.|+......+++.+.+.+...+.+... +..+...+....+.
T Consensus 350 ~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 350 L-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred c-cceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 1 1222222211222 223455577899999 679999999999888888888887776665533 44455555444444
Q ss_pred HHHHHhhcccCC
Q 045446 186 CLTAVLFLHENQ 197 (263)
Q Consensus 186 ~~~~~~~~~~~~ 197 (263)
.+....+++|.+
T Consensus 429 ~i~~~~~lpET~ 440 (451)
T PF00083_consen 429 IIFVYFFLPETK 440 (451)
T ss_pred HhheeEEEeeCC
Confidence 444445555543
No 220
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.15 E-value=4.2e-05 Score=69.09 Aligned_cols=155 Identities=15% Similarity=0.080 Sum_probs=96.2
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccCh--------HHHHHH-HHHHHHHHHHHHHHH
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPT--------SAILII-GSLEGLIGYGVQWLV 98 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~--------r~~~~~-g~~~~~~g~~~~~~~ 98 (263)
.+.+..|.|.+ ++.+|+|..+.++++..-.+...+ .+.+|.++||.-+ ||++-. +....++..+
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~----- 348 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLL----- 348 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHH-----
Confidence 45566788987 566999999999987777676666 9999999999854 233222 2222222222
Q ss_pred HhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhh-cCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC---ChhHH
Q 045446 99 VSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRN-FPKNRGPVSGILKGYVGLSTAIFTDICTALFSS---KPSAF 174 (263)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~-fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~---~~~~~ 174 (263)
..+..++...+.-.+ .+..+++............... -|++-+..+|+.+....+.+.+.|.+.+.+..+ ..|+.
T Consensus 349 ~l~~~~~~~~~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 349 VLAFTSDEHRLLAVI-LLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred eeeecCCCcchHHHH-HHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 223333211111111 1222233333333444444444 688899999999999999999999999999854 36777
Q ss_pred HHHHHHHHHHHHHHHH
Q 045446 175 LLILAIVPAVICLTAV 190 (263)
Q Consensus 175 ~~~~~~~~~~~~~~~~ 190 (263)
.+++.....+++.+..
T Consensus 428 VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHHHHHHHHHhchhe
Confidence 7766655555554433
No 221
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.98 E-value=5.9e-05 Score=68.54 Aligned_cols=141 Identities=20% Similarity=0.076 Sum_probs=89.7
Q ss_pred HHHHhhCCcccchhchHHHHHH-cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc----cChHHHHHHHHHHH-HHHHHH
Q 045446 22 WVQATCGNNYTFSNYSDALKSL-MALTQLQLNNLSVAKDVGKAF-GLLSGLASDR----LPTSAILIIGSLEG-LIGYGV 94 (263)
Q Consensus 22 ~~~~~~~~~~~~~~~~p~l~~~-~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r~~~~~g~~~~-~~g~~~ 94 (263)
........+|++..+.|.+-++ .|+|..+.+.+++...++.++ .+.+|.++|| ..+|........+. .+|...
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~ 360 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAIS 360 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3334446788899999997665 679999999999999999988 8999999999 66676666655443 333232
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 95 QWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
+ ...+.. +....+......+.+...+.+..-..+... .+|-+..+......+.++++.+++.......
T Consensus 361 l-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 361 L-----LAAAVL--PGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred H-----Hhhccc--hHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 1 111111 222222223333344444455555556554 3455666666777778888888877665554
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.93 E-value=0.00052 Score=60.11 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=101.1
Q ss_pred HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhc-ccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 045446 41 KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASD-RLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMG 118 (263)
Q Consensus 41 ~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~D-r~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (263)
.+.+|.|..|...++.....|..+ ....|++.. |.++|++...|+....++...+. ..+...+ .+.+-..-++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii--~a~~~~~--~~~~~~~~~l~ 311 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII--LAGPLGS--PWLFRPGVFLL 311 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH--HHHhccc--chHHHHHHHHH
Confidence 566999999999999999999888 567786666 78899999999988887776554 3344433 37777888999
Q ss_pred hhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 119 GNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 119 g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
|+|.|.+...+.+.+++.-+ ++.|..+|.+.+.+.++..++..+++.+.|
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999886 678999999999888888888887777654
No 223
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.90 E-value=3.5e-05 Score=68.11 Aligned_cols=163 Identities=11% Similarity=0.032 Sum_probs=102.7
Q ss_pred hCCcccchhchHHHHHHcCCCHHHHHH-----HHHHHHHhhhh-----hhHHHhhhcccChHHHHHHHHHHHHHHHHHHH
Q 045446 27 CGNNYTFSNYSDALKSLMALTQLQLNN-----LSVAKDVGKAF-----GLLSGLASDRLPTSAILIIGSLEGLIGYGVQW 96 (263)
Q Consensus 27 ~~~~~~~~~~~p~l~~~~~~s~~~~~~-----i~~~~~~~~~~-----~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~ 96 (263)
....|..+.++..+-++.++.+.+... +.....+.... .++...+.|++|||++-+-|.++..+..+
T Consensus 317 Diafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~--- 393 (538)
T KOG0252|consen 317 DIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFF--- 393 (538)
T ss_pred hhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHH---
Confidence 345778888888887766665444333 22233332222 23567899999999999999998877766
Q ss_pred HHHhccCCC-----chHHHHHHH-HHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhC-
Q 045446 97 LVVSEKIHP-----LPYWQMCIF-LCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFS- 168 (263)
Q Consensus 97 ~~~~~~~~~-----~~~~~l~~~-~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~- 168 (263)
..+...+ ..+-.++.. .+++-+| -.+....+..|.|| +-||+.-|+..+..-.|+.++......+.+
T Consensus 394 --~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 394 --VIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred --HHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 3333322 112222222 2332222 23455677889999 669999999999999999999988888877
Q ss_pred ----CChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 045446 169 ----SKPSAFLLILAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 169 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
....+..+++.......+.+..++++|.+
T Consensus 469 ~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 469 NYPPNIGVRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred cCCccccchHHHHHHHHHHHHhHheeEEeeccc
Confidence 33334444444444455565555655543
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.89 E-value=0.00042 Score=60.47 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=94.3
Q ss_pred hhCCcccchhchHHHHHH-cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccC
Q 045446 26 TCGNNYTFSNYSDALKSL-MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKI 103 (263)
Q Consensus 26 ~~~~~~~~~~~~p~l~~~-~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (263)
..|.-.....+.+.+..+ .|.+..|.+...+.+-.+..+ -.++-++..|+.+.|.+...+....+-++.. ...
T Consensus 248 YVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~-----~l~ 322 (422)
T COG0738 248 YVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV-----ALI 322 (422)
T ss_pred HHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-----HHh
Confidence 345444555566777655 888999988888888888777 5677789999999999888765544444422 222
Q ss_pred CCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 104 HPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 104 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
++ .+.+. .-.+.|...+.++|...+...+..|++-..+.++ -.....|+++.|++.+.+.|.
T Consensus 323 ~g--~v~~~-~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~ 384 (422)
T COG0738 323 GG--VVALY-ALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADM 384 (422)
T ss_pred cC--hHHHH-HHHHHHHHhHHHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHh
Confidence 22 23232 3455677889999999999999999443333333 344558999999999999876
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.00023 Score=63.79 Aligned_cols=119 Identities=16% Similarity=0.108 Sum_probs=87.4
Q ss_pred cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhch
Q 045446 44 MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNST 122 (263)
Q Consensus 44 ~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~ 122 (263)
+|.++.+..+.......+... .++..++.+|+|+|+++..+.++.+++...++..- ..+.+.+++..++.++|.
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-----~~~~~l~~~~~~i~~~g~ 341 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-----AGSVVLIVVALIIAGVGT 341 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-----CcchHHHHHHHHHHHHHh
Confidence 566666666666666667666 78999999999999999999999999999776542 234577777889999999
Q ss_pred hhhhhhHHHHHhhhcC--C----C--CCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 123 TWMNTAVLVTCMRNFP--K----N--RGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 123 ~~~~~~~~~~~~~~fp--~----~--rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
+..++...+.+.|..+ | + -|...|....+.=+|.+++..+.+..+
T Consensus 342 ~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 342 GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888877654 2 1 244455555555567777766666555
No 226
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.86 E-value=8.5e-05 Score=50.52 Aligned_cols=64 Identities=16% Similarity=0.165 Sum_probs=57.3
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHH
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYG 93 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~ 93 (263)
.+.+....|.++++.++|.++.+|+.+...+|+.+ .+...++.++..+++.+..+.+...+...
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 45567778999999999999999999999999999 78999999998889999999888887777
No 227
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.85 E-value=0.0051 Score=55.70 Aligned_cols=130 Identities=11% Similarity=-0.029 Sum_probs=89.4
Q ss_pred HHHHHHcCC-----CHHHHHHHHHHHHHhhhh--hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCc----
Q 045446 38 DALKSLMAL-----TQLQLNNLSVAKDVGKAF--GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPL---- 106 (263)
Q Consensus 38 p~l~~~~~~-----s~~~~~~i~~~~~~~~~~--~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~---- 106 (263)
..+++.+.. +.++..++-+...+...+ .++.+++++|++|++++-.-...+..-..++...+....+..
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 567887755 446788877766565443 789999999999999999887777777666655543222110
Q ss_pred --------------------hHHHHHHHHHHHhhchhhhhh-hHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 107 --------------------PYWQMCIFLCMGGNSTTWMNT-AVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 107 --------------------~~~~l~~~~~l~g~g~~~~~~-~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
..|...++....-+-.....+ .-.+.+.|.+. ++-.|-.++...+.++|..+++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333333333333333333 45678899998 67788999999999999999999888
Q ss_pred Hhh
Q 045446 165 ALF 167 (263)
Q Consensus 165 ~l~ 167 (263)
.+.
T Consensus 187 ~~~ 189 (472)
T TIGR00769 187 YFS 189 (472)
T ss_pred HHH
Confidence 775
No 228
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.84 E-value=6.7e-05 Score=50.34 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=45.3
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLE 87 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~ 87 (263)
+-.|.|.+.++.|+|..|.+.+.........+ .|+.|+++||+++++....+...
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33455666778999999999988888888777 89999999999999888776654
No 229
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.82 E-value=0.015 Score=52.96 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=78.1
Q ss_pred hhhhHHHhhhcccChHHHHHHHHHHHH-HHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CC
Q 045446 63 AFGLLSGLASDRLPTSAILIIGSLEGL-IGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KN 140 (263)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~ 140 (263)
...|+.|-++|+-|+||-++....... +....++.. .++ +++...+...+.-++.+.......+.+.+.-+ ++
T Consensus 85 ll~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v----~~~-~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~ 159 (477)
T PF11700_consen 85 LLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV----SPG-QWWLALVLFIIANVGYEASNVFYNAYLPDLARPEP 159 (477)
T ss_pred HHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh----Ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCCh
Confidence 348999999999998877777665443 344433322 222 23333333444445555555555566666665 44
Q ss_pred C--------------------------CchHHHHHhhhhhHHHHHHHHHHHhhCC--C-------hhHHHHHHHHHHHHH
Q 045446 141 R--------------------------GPVSGILKGYVGLSTAIFTDICTALFSS--K-------PSAFLLILAIVPAVI 185 (263)
Q Consensus 141 r--------------------------g~~~gi~~~~~~lg~~i~~~l~~~l~~~--~-------~~~~~~~~~~~~~~~ 185 (263)
+ ++..|...+...+|+.+.-.+.-.+... . .+..+.+.++-..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vf 239 (477)
T PF11700_consen 160 RVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVF 239 (477)
T ss_pred hhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHH
Confidence 5 8999988888878887765554443321 1 123344445555667
Q ss_pred HHHHHhhcccCCC
Q 045446 186 CLTAVLFLHENQP 198 (263)
Q Consensus 186 ~~~~~~~~~~~~~ 198 (263)
+++...++|++|+
T Consensus 240 siP~~~~~~~~~~ 252 (477)
T PF11700_consen 240 SIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHhCCCCCC
Confidence 7788888887765
No 230
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.81 E-value=0.00033 Score=63.19 Aligned_cols=124 Identities=19% Similarity=0.241 Sum_probs=84.1
Q ss_pred Hhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhch--hhhhhhHHHHHhhh
Q 045446 60 VGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNST--TWMNTAVLVTCMRN 136 (263)
Q Consensus 60 ~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~--~~~~~~~~~~~~~~ 136 (263)
+...+ .+..|.++||+|||..+....+...+..+..... .+|.+. +.+... +.......+.+.+.
T Consensus 73 ~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~--------~~~~~~----~~~l~g~~~~~~s~~~a~vadi 140 (463)
T KOG2816|consen 73 LLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ--------GYWFFL----LLGLSGGFSAIFSVGFAYVADI 140 (463)
T ss_pred HHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH--------HHHHhh----hcccccchhhhhhhhhhheeec
Confidence 33344 8999999999999999999888777666633221 123332 333332 33455667778888
Q ss_pred cC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH-Hhhccc
Q 045446 137 FP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTA-VLFLHE 195 (263)
Q Consensus 137 fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 195 (263)
-. ++|....|+.....+.+..++|.+++.+.....-...+.++........+- ..+++|
T Consensus 141 s~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 141 SSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred cchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 77 679999999999999999999999998887644445555555544444433 344444
No 231
>PRK11462 putative transporter; Provisional
Probab=97.72 E-value=0.0011 Score=60.17 Aligned_cols=113 Identities=11% Similarity=-0.061 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhh
Q 045446 50 QLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTA 128 (263)
Q Consensus 50 ~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~ 128 (263)
..+++.....++..+ .+++++++||+|+|++...+.....+....+. ... +.+.+.+++..++.|++.+...+.
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~l~g~~~~~~~~l 338 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMF--FVP---MQASITMFVFIFVIGVLHQLVTPI 338 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH--Hhc---hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555566666 78899999999999987765554433333221 111 112223334445566666655554
Q ss_pred HHHHHhhhcC------CCCCchH--HHHHhhhhhHHHHHHHHHHHhh
Q 045446 129 VLVTCMRNFP------KNRGPVS--GILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 129 ~~~~~~~~fp------~~rg~~~--gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
..+.+.+..+ .+|..++ +......-+|.++++.+.+.++
T Consensus 339 ~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 339 QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555433 1344333 4444455566666666655544
No 232
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.70 E-value=0.001 Score=59.64 Aligned_cols=131 Identities=11% Similarity=0.051 Sum_probs=89.2
Q ss_pred hchHH-HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcc----cCh-HHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 35 NYSDA-LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDR----LPT-SAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 35 ~~~p~-l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.|... +.+..|+++...+.+....=+.-++ -|+.|.+.|| +|| |+=++.|.+.+++.+.+++..-. .+.+.+
T Consensus 33 ~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~-~~~~~k 111 (467)
T COG2211 33 LYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD-FSMTGK 111 (467)
T ss_pred HHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC-cccCcc
Confidence 34444 4677999999999855555555555 8999999997 566 45566666888888876654321 121234
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhhhcC--CCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP--KNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp--~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
....++-..+.+++......+-.+...+.-+ +||.+..+.-..+.++|..+...+...+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556777788888887777777777664 6899999998888777766554444333
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.69 E-value=0.00078 Score=51.64 Aligned_cols=104 Identities=13% Similarity=-0.033 Sum_probs=76.6
Q ss_pred HHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHh
Q 045446 55 SVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCM 134 (263)
Q Consensus 55 ~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~ 134 (263)
...+.......++.+.+.+|+|+|+.+++|.+...+-... ...+ +.+.++.+-.+.|+|.+..+++....+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~------~~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS------FFYP--NSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH------HHhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 3334444444777888999999999999998877644331 1222 3477888899999999999999999999
Q ss_pred hhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 135 RNFP-KNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 135 ~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
+.-+ ++|++-.|+.......+..+|..+.-..
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877 5699999988887777766665544433
No 234
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.64 E-value=0.00024 Score=66.65 Aligned_cols=165 Identities=16% Similarity=0.027 Sum_probs=120.7
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHH--Hhcc-------
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLV--VSEK------- 102 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~--~~~~------- 102 (263)
++.-..++.+.++++.++.+++...+.++..+ ..+..+..-|..|-+.+-.|.++.++|.++..+- ..+.
T Consensus 116 ~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~ 195 (735)
T KOG3626|consen 116 FNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEV 195 (735)
T ss_pred hhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhh
Confidence 34445778999999999999999999999988 7888999999999999999999999998866432 0000
Q ss_pred ------CC-----------------------------CchHH-HHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchH
Q 045446 103 ------IH-----------------------------PLPYW-QMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVS 145 (263)
Q Consensus 103 ------~~-----------------------------~~~~~-~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~ 145 (263)
.+ +..+| .++++.++.|+|....++...+++-|+.. ++-...+
T Consensus 196 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYl 275 (735)
T KOG3626|consen 196 IKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYL 275 (735)
T ss_pred hhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHH
Confidence 00 00133 44556999999999999999999999887 5578889
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhC---------------C-----ChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 045446 146 GILKGYVGLSTAIFTDICTALFS---------------S-----KPSAFLLILAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 146 gi~~~~~~lg~~i~~~l~~~l~~---------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
|+.....-+|+++|-.+++.... + .||-.+++.+.+....++....+=++.|
T Consensus 276 gi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 276 GILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 99999888999988777776542 0 2344455555555555555555444444
No 235
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.63 E-value=0.00017 Score=64.93 Aligned_cols=126 Identities=11% Similarity=0.104 Sum_probs=93.6
Q ss_pred HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHh
Q 045446 41 KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGG 119 (263)
Q Consensus 41 ~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 119 (263)
.++.+-...--+-.+..--.+-+. -++.+++..|+|+-+++..|.+.+..=+. .....+| .|..+-..++||
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~-----~~S~L~n--~W~vLPieilqg 470 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFL-----YYSYLQN--PWMVLPIEILQG 470 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHH-----HHHHhcC--chheeeHHHHHH
Confidence 455554444444333333334444 67889999999999999999988877776 3333343 387888899999
Q ss_pred hchhhhhhhHHHHHhhhcC-CCCCchHHHHH-hhhhhHHHHHHHHHHHhhCCChhH
Q 045446 120 NSTTWMNTAVLVTCMRNFP-KNRGPVSGILK-GYVGLSTAIFTDICTALFSSKPSA 173 (263)
Q Consensus 120 ~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~-~~~~lg~~i~~~l~~~l~~~~~~~ 173 (263)
+..+..+.+..+++....| +-|.++.|+.+ .+.|+|=.+|..+++.+++..+.+
T Consensus 471 it~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ 526 (618)
T KOG3762|consen 471 ITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGAR 526 (618)
T ss_pred HHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhH
Confidence 9999999999999999998 55999999985 556888888888888888763333
No 236
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.63 E-value=0.00016 Score=62.90 Aligned_cols=136 Identities=15% Similarity=0.064 Sum_probs=94.2
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccC--hHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 045446 40 LKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLP--TSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLC 116 (263)
Q Consensus 40 l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (263)
..+++..+.-+.+..-....+...+ ..+.|.++||++ |+.....|.+.....+.+. ... .++.++.+-++
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i-----P~~--~~~~~L~vp~~ 369 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI-----PFA--TSIAQLWVPNF 369 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh-----Hhh--hhHHHHhhhhH
Confidence 4566775554777766667777788 899999999999 6666555555544333321 112 24566777777
Q ss_pred HHhhchhhhhhhHHHHHhhhcC-CC-C-----CchHHHHHhhhhhHHHHHHHHHHHhhCC-ChhHHHHHHHHHH
Q 045446 117 MGGNSTTWMNTAVLVTCMRNFP-KN-R-----GPVSGILKGYVGLSTAIFTDICTALFSS-KPSAFLLILAIVP 182 (263)
Q Consensus 117 l~g~g~~~~~~~~~~~~~~~fp-~~-r-----g~~~gi~~~~~~lg~~i~~~l~~~l~~~-~~~~~~~~~~~~~ 182 (263)
..+++.+..++....+.....+ ++ . |.+.++.....++|.+++|.+++.+.+. +..+....++..-
T Consensus 370 ~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n 443 (464)
T KOG3764|consen 370 GLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILN 443 (464)
T ss_pred HHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHH
Confidence 7788888888877777777665 32 3 7889999999999999999999999887 4444444444333
No 237
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.54 E-value=0.01 Score=52.50 Aligned_cols=154 Identities=16% Similarity=0.070 Sum_probs=101.6
Q ss_pred hchHHHHHH-cCCCHHHHHH-HHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 045446 35 NYSDALKSL-MALTQLQLNN-LSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQM 111 (263)
Q Consensus 35 ~~~p~l~~~-~~~s~~~~~~-i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (263)
...|.+.+. .|++++|+.- +.=...-.... .++...+.|..+.|++++++.+...+...++ +.+ .+.+.+
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll---l~~----~sv~~m 97 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL---LFG----TSVLAM 97 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH---HHH----CcHHHH
Confidence 445667665 8999999887 43333334444 7788999999999999999988776666543 222 245777
Q ss_pred HHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCC--hhHHHHHHHHHHHHHHHH
Q 045446 112 CIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSK--PSAFLLILAIVPAVICLT 188 (263)
Q Consensus 112 ~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~ 188 (263)
-+..+..|++.+. ..+-.+++-...| ++--++.+...+..-.|-.++..++..+...+ .-.....+......++++
T Consensus 98 q~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 98 QLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 7778888876654 3444455555556 44568888888887777777777777666532 223334455555556666
Q ss_pred HHhhcccC
Q 045446 189 AVLFLHEN 196 (263)
Q Consensus 189 ~~~~~~~~ 196 (263)
..++++.+
T Consensus 177 ~~~fLP~~ 184 (412)
T PF01770_consen 177 IALFLPMP 184 (412)
T ss_pred HHHHcCCC
Confidence 66666543
No 238
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.52 E-value=0.012 Score=53.58 Aligned_cols=132 Identities=11% Similarity=-0.024 Sum_probs=88.8
Q ss_pred hhHHHhhhcccCh-HHHHHHHHHHHHHHHHHHHHHHhccC--------------CCch-HHHHHHHHHHHhhchhhhhhh
Q 045446 65 GLLSGLASDRLPT-SAILIIGSLEGLIGYGVQWLVVSEKI--------------HPLP-YWQMCIFLCMGGNSTTWMNTA 128 (263)
Q Consensus 65 ~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~--------------~~~~-~~~l~~~~~l~g~g~~~~~~~ 128 (263)
+..-.++.+|+|+ |++...+.++.+++.....+.- ..+ ++.. .+..++...+.|+..+..+..
T Consensus 322 s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~si 400 (477)
T TIGR01301 322 SIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVT-YVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSI 400 (477)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH-hhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHH
Confidence 5667889999995 6776888777777766554321 110 1111 245556677889999999999
Q ss_pred HHHHHhhhcC-C--CCCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 045446 129 VLVTCMRNFP-K--NRGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLILAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 129 ~~~~~~~~fp-~--~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
-++++++..| + +.|..+|+.+.+.-+...+.....+.+.+. +.....+.++.+..+++.+...+..+++
T Consensus 401 Pfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 401 PFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred hHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999888 2 359999999999888887777655553322 3344566666666666666666555444
No 239
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.49 E-value=0.0025 Score=58.10 Aligned_cols=116 Identities=10% Similarity=0.040 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhhhh-hhHHHhhhcccCh--H-----HHHHHHHHHHHHHHHHHHHHHhccC--CCchHHHHHHHHHHHhh
Q 045446 51 LNNLSVAKDVGKAF-GLLSGLASDRLPT--S-----AILIIGSLEGLIGYGVQWLVVSEKI--HPLPYWQMCIFLCMGGN 120 (263)
Q Consensus 51 ~~~i~~~~~~~~~~-~~~~G~l~Dr~G~--r-----~~~~~g~~~~~~g~~~~~~~~~~~~--~~~~~~~l~~~~~l~g~ 120 (263)
.+|+.+...+...+ +|+.+++-.|.++ | .=+.+|.++.++++..+........ ...+.+.++...+++.+
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 34444555554444 7777766555522 1 1267788888888776654332211 11355668888999999
Q ss_pred chhhhhhhHHHHHhhhcCC-CCCchHHHHHhhh-hhHHHHHHHHHHHh
Q 045446 121 STTWMNTAVLVTCMRNFPK-NRGPVSGILKGYV-GLSTAIFTDICTAL 166 (263)
Q Consensus 121 g~~~~~~~~~~~~~~~fp~-~rg~~~gi~~~~~-~lg~~i~~~l~~~l 166 (263)
|.=...|...+.+++..|+ -||+.+|...... .+|+.++..+.+..
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999994 5999999997633 47777777766654
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.11 E-value=0.16 Score=45.09 Aligned_cols=132 Identities=15% Similarity=0.096 Sum_probs=77.8
Q ss_pred hhhhhHHHhhhcccChHHHHHHHH-HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-C
Q 045446 62 KAFGLLSGLASDRLPTSAILIIGS-LEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-K 139 (263)
Q Consensus 62 ~~~~~~~G~l~Dr~G~r~~~~~g~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~ 139 (263)
+.+.|+-|.++|+.|+||-.+.-. .+..+....++.. .+...++..+++..+..++.......-.+.+.+..+ +
T Consensus 72 a~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i----~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~ 147 (438)
T COG2270 72 ALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI----PPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKD 147 (438)
T ss_pred HHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh----CCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCcc
Confidence 344899999999999876655444 3444444433332 111234555556777777777777777788888877 4
Q ss_pred CCCchHHHHHhhhhhHHHHHHHHH--HHhhC---------------C--ChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 045446 140 NRGPVSGILKGYVGLSTAIFTDIC--TALFS---------------S--KPSAFLLILAIVPAVICLTAVLFLHENQ 197 (263)
Q Consensus 140 ~rg~~~gi~~~~~~lg~~i~~~l~--~~l~~---------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
+-++..++.....-+|+.+.-... ..... + +.+-...+.++-..+..++.....++.+
T Consensus 148 ~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~ 224 (438)
T COG2270 148 NMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAE 224 (438)
T ss_pred ccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccc
Confidence 467777777666666665543322 11111 1 2233444445555666677777666655
No 241
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.06 E-value=0.0078 Score=55.32 Aligned_cols=128 Identities=15% Similarity=0.094 Sum_probs=83.1
Q ss_pred hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchH-HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCC
Q 045446 65 GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPY-WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRG 142 (263)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~-~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg 142 (263)
....+.+.||+|||.....+.....++.+...... .... +...+...+...+.+..+........|.+| ..|.
T Consensus 367 ~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 367 YFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLP-----DDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhh-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 34558999999999999999999888888544332 1111 123334445555556666677889999999 5699
Q ss_pred chHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHH-HHHHHHHHHHHHHhhcccCCC
Q 045446 143 PVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLI-LAIVPAVICLTAVLFLHENQP 198 (263)
Q Consensus 143 ~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (263)
.+.|.......+++.+.|.+....... ....... .+....+.+.+...++++++.
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQM-FPLLGLILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-cccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence 999999999989988887766433321 1111211 344454555555556665443
No 242
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.0026 Score=52.93 Aligned_cols=121 Identities=15% Similarity=0.084 Sum_probs=73.6
Q ss_pred HHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHh
Q 045446 41 KSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGG 119 (263)
Q Consensus 41 ~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 119 (263)
-+.+++...|++.+..+..-...+ +.+.|-|+||-|||+.-..-++...++++ - ..+ +.+-++.++|.++|
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-----T-KhS--pqYkVLmVGR~LGG 135 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-----T-KHS--PQYKVLMVGRVLGG 135 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-----h-hcC--CceEEEeehhhhhh
Confidence 355788888888765555444444 89999999999999976554444443333 2 222 24567889999999
Q ss_pred hchhhhhhhHHHHHhhhcCCCCCchHHH-----HH---hhhhhHHHHHHHHHHHhhCC
Q 045446 120 NSTTWMNTAVLVTCMRNFPKNRGPVSGI-----LK---GYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 120 ~g~~~~~~~~~~~~~~~fp~~rg~~~gi-----~~---~~~~lg~~i~~~l~~~l~~~ 169 (263)
+..+..+++--+....---++|+.-.-. .+ ..+++-+.+.+..+..+.+.
T Consensus 136 iaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~ 193 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDT 193 (454)
T ss_pred HHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 9998887765443322212355533222 22 23445555555555555543
No 243
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.03 E-value=0.014 Score=52.83 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=92.0
Q ss_pred HHHHcCCCHHHHHHHHHHHHHhhh-hhh-HHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 045446 40 LKSLMALTQLQLNNLSVAKDVGKA-FGL-LSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCM 117 (263)
Q Consensus 40 l~~~~~~s~~~~~~i~~~~~~~~~-~~~-~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (263)
++..+++++++.+.+......... .+. ..+.+...+|-|++...|...-.+... ..++++. .|+.+....+
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~-----~~af~~~--~w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLL-----LFAFATE--TWMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHH-----HHHHhcc--chhhhHHHHH
Confidence 467799999999985444444444 454 445889999999999999888888887 5555553 3777777776
Q ss_pred HhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhh
Q 045446 118 GGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALF 167 (263)
Q Consensus 118 ~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~ 167 (263)
.++ .+...++.-+...++.+ ++||++.++.....++++.+.|.+.+.+.
T Consensus 341 ~~~-~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 341 VAL-AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHh-hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 664 56667777788888776 78999999999999999999999888764
No 244
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.016 Score=52.15 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=77.6
Q ss_pred HHHHHHHhhhh-hhHHHhh---hcccChHHHHHHHHHHHHHHHHHHHHHHhccCC-----------CchHHHHHHHHHHH
Q 045446 54 LSVAKDVGKAF-GLLSGLA---SDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIH-----------PLPYWQMCIFLCMG 118 (263)
Q Consensus 54 i~~~~~~~~~~-~~~~G~l---~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~-----------~~~~~~l~~~~~l~ 118 (263)
......++... +...+.+ .||+|+++++.++..+..++.++..+....-+| .+++....+..++.
T Consensus 284 ~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~ 363 (461)
T KOG3098|consen 284 YSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLL 363 (461)
T ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHH
Confidence 33344445555 5555544 466899999999999988888866544332221 01234455567889
Q ss_pred hhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHH
Q 045446 119 GNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTD 161 (263)
Q Consensus 119 g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~ 161 (263)
|++-+...+..+.++....|++|..+-++.+...++++.+.-.
T Consensus 364 G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 364 GFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred hhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999888887766433
No 245
>PRK03612 spermidine synthase; Provisional
Probab=96.85 E-value=0.094 Score=48.38 Aligned_cols=152 Identities=9% Similarity=-0.100 Sum_probs=78.9
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHH--HHHHHHHHHHHHhccCCCchHHHHHHH
Q 045446 38 DALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLE--GLIGYGVQWLVVSEKIHPLPYWQMCIF 114 (263)
Q Consensus 38 p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (263)
..+..-+|-+..+.+.+...+..+..+ +..+|++.++--++.. .+-..+ .+..+.+......+... .....++..
T Consensus 39 r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~-~~~~~~~~~ 116 (521)
T PRK03612 39 TLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQG-LSRLLLYVL 116 (521)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 334555788888888877777788777 6777777644322222 111111 11111111111111110 011112223
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHHHHHHHHHHh
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
.++.++-.|+..|....+..+.-.++-|+..|-..+...+|+.+|+.+.+.++-. +.....+..+.+..+++++..+
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666655555544433223456778888888888888888888776643 4455555555555444444433
No 246
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.68 E-value=0.012 Score=51.40 Aligned_cols=125 Identities=16% Similarity=0.104 Sum_probs=86.9
Q ss_pred HHH-HHHcCCCHHHHHHHHHHHHHhh-hhhhHHHhhhcccC--hHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 045446 38 DAL-KSLMALTQLQLNNLSVAKDVGK-AFGLLSGLASDRLP--TSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCI 113 (263)
Q Consensus 38 p~l-~~~~~~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (263)
+.+ .+.+|++..|.+-+.....+.+ .++....+..||.. -+..+..+.....-... +.+.+..+ .+++.
T Consensus 285 ~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~l-----lls~~~~~--~~l~~ 357 (451)
T KOG2615|consen 285 LFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFL-----LLSLARTP--VVLYL 357 (451)
T ss_pred HHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHH-----HHhccccc--hhhhH
Confidence 444 3569999999998544444444 44888888888876 55555554444333333 33444433 45667
Q ss_pred HHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 114 FLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 114 ~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
.-.+-.+..+..-+.....+.+.-| ++||+++|+..+...++=+++|.+.+.+...
T Consensus 358 ~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 358 GSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 7777777777666666777777888 6799999999999999999999999877654
No 247
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.47 E-value=0.0099 Score=52.81 Aligned_cols=163 Identities=15% Similarity=0.058 Sum_probs=93.2
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccCh-HHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPT-SAILIIGSLEGLIGYGVQWLVVSEKIHPLP 107 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (263)
.+..+.........-|++....+++.....++..+ +...|.+.||... |++..+-.....++.. .+..+-......
T Consensus 282 F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~--~l~~~t~~~~~~ 359 (480)
T KOG2563|consen 282 FNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL--MLLTCTLFLGDS 359 (480)
T ss_pred HHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH--HHHHhhccCCce
Confidence 33333333323344577878888877666666666 8999999999865 5555555544444432 111222222222
Q ss_pred HHHHHHHHHHHhhchhhhhhhHHHHHhh-hcCCCCCchHHHHHhhhhhHHHHHHHHHHHhhCCCh----hHHHHHHHHHH
Q 045446 108 YWQMCIFLCMGGNSTTWMNTAVLVTCMR-NFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSKP----SAFLLILAIVP 182 (263)
Q Consensus 108 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~-~fp~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~----~~~~~~~~~~~ 182 (263)
+.++.-..+.|.......|...-.-.| .||..-|+..|..+....+-+.+...+.+...++.+ +...-+.....
T Consensus 360 -viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 438 (480)
T KOG2563|consen 360 -VIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVS 438 (480)
T ss_pred -EehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHH
Confidence 333333444555555556666655555 679777888888888777777777777777766522 33223333333
Q ss_pred HHHHHHHHhhccc
Q 045446 183 AVICLTAVLFLHE 195 (263)
Q Consensus 183 ~~~~~~~~~~~~~ 195 (263)
.........+.|+
T Consensus 439 ~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 439 ALLGAILVAFFRP 451 (480)
T ss_pred HHHHHHHHhhhhh
Confidence 3444444445554
No 248
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.45 E-value=0.061 Score=48.54 Aligned_cols=132 Identities=9% Similarity=0.085 Sum_probs=85.2
Q ss_pred cccchhchHHHH-HH---cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccC-------hHHHHHHHHHHHHHHHHHHHH
Q 045446 30 NYTFSNYSDALK-SL---MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLP-------TSAILIIGSLEGLIGYGVQWL 97 (263)
Q Consensus 30 ~~~~~~~~p~l~-~~---~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G-------~r~~~~~g~~~~~~g~~~~~~ 97 (263)
...++.|..... ++ +++++++.+-+ ..+.-.+ +|+.-++..|.+ .+.-+-+|..+...+++.+..
T Consensus 304 ~ssl~~~a~~~v~~~~~g~~vp~~~fQsl---Np~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~ 380 (498)
T COG3104 304 GSSLNLYADRNVNRQIFGFEVPPAWFQSL---NPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLL 380 (498)
T ss_pred cchHHHHHHHhhcccccceecCHHHHHhh---CHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 344566665543 23 23455544433 2333222 555444444422 234566677777777776654
Q ss_pred HH--hcc-CCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCC-CCchHHHHHhhhhhHHHHHHHHHH
Q 045446 98 VV--SEK-IHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKN-RGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 98 ~~--~~~-~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~-rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
.. .+. .+..+.+.++...+++++|.=+..+...+.+.+.-|++ .+.+++.+......|..+...+.+
T Consensus 381 ~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 381 AGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 41 222 33467788888899999999999999999999999954 888899888777777777766665
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.21 E-value=0.043 Score=48.20 Aligned_cols=116 Identities=9% Similarity=0.016 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC--CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCC-CC---chHHHHHhhh
Q 045446 79 AILIIGSLEGLIGYGVQWLVVSEKIH--PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKN-RG---PVSGILKGYV 152 (263)
Q Consensus 79 ~~~~~g~~~~~~g~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~-rg---~~~gi~~~~~ 152 (263)
|++.+|.++..+|..++.++...... +...+.++++..+.++|.|..-+...+...|.++++ +. +.........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788889999998875544332211 112355778888899999999999999999999843 33 3444456666
Q ss_pred hhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHhhcc
Q 045446 153 GLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVLFLH 194 (263)
Q Consensus 153 ~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (263)
++|+.++..+..++-++..|...+.+..+..+++++....-+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 788888777777666665566666666555555655554443
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.93 E-value=0.32 Score=43.15 Aligned_cols=118 Identities=15% Similarity=0.134 Sum_probs=73.8
Q ss_pred HHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhc
Q 045446 59 DVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNF 137 (263)
Q Consensus 59 ~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~f 137 (263)
.+-..+ -+...+..+|+..+.=.....++..+|.+ ....++ +.+.-+++-.+.+++.|.....-... ++.+
T Consensus 69 i~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l-----~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 69 ILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGML-----LVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred HHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHh-----heeecc--chhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 333444 56788899998754444445556666776 445544 44666777888888888877766665 4566
Q ss_pred CCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHHHHHHHHHHHH
Q 045446 138 PKNRGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLILAIVPAVICL 187 (263)
Q Consensus 138 p~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~ 187 (263)
|+ .+++-+.++.|.++.+++.....+.+. ..+.........+.+..+
T Consensus 141 ~~---~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~ 189 (402)
T PF02487_consen 141 GK---SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLL 189 (402)
T ss_pred Cc---cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 64 346667777777888877766555442 445555555555544333
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.75 E-value=0.27 Score=44.19 Aligned_cols=127 Identities=11% Similarity=0.018 Sum_probs=81.7
Q ss_pred chhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHH--HHHHhccC-CCchH
Q 045446 33 FSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQ--WLVVSEKI-HPLPY 108 (263)
Q Consensus 33 ~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~--~~~~~~~~-~~~~~ 108 (263)
++.....+..+-|+|+.+++..-....+.... .....++.+|+|..|.-..+...-.....+. .....+.. +..+.
T Consensus 277 f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 34334445444599999999877777776666 8899999999999998888866433222211 11111211 11222
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIF 159 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~ 159 (263)
..++.+-.+.=+|.=.++-....++.|..| ++||+..|...+.+++-..+-
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~ 408 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLS 408 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence 223333333335666667777888999999 679999999998887766553
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=95.18 E-value=0.33 Score=45.44 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=82.0
Q ss_pred hHHHHHHc-CC-CHHHHHH-HHHHHHHhhhh-hhHHHhhh---cccC-----hHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 045446 37 SDALKSLM-AL-TQLQLNN-LSVAKDVGKAF-GLLSGLAS---DRLP-----TSAILIIGSLEGLIGYGVQWLVVSEKIH 104 (263)
Q Consensus 37 ~p~l~~~~-~~-s~~~~~~-i~~~~~~~~~~-~~~~G~l~---Dr~G-----~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (263)
..++.+++ |. ++.+.+. +.+...+++.+ -+.+|.+. .|.+ +|++.+.......++.+++++.. .
T Consensus 376 ~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~---p- 451 (591)
T PTZ00207 376 ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTL---P- 451 (591)
T ss_pred HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHC---C-
Confidence 46677777 66 3332222 55566666666 45556554 1211 33444443334666666554331 1
Q ss_pred CchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHH-HHHHHHhhC
Q 045446 105 PLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIF-TDICTALFS 168 (263)
Q Consensus 105 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~-~~l~~~l~~ 168 (263)
...+++.-++.|++.|..++....+..|.|.++-|+-..+.....-+|+.+. ..+.+.+.+
T Consensus 452 ---~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd 513 (591)
T PTZ00207 452 ---KAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYT 513 (591)
T ss_pred ---ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 1357888999999999999999999999999778999888888887888887 446665654
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.56 E-value=0.15 Score=46.05 Aligned_cols=102 Identities=12% Similarity=-0.142 Sum_probs=77.7
Q ss_pred HHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHh
Q 045446 55 SVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCM 134 (263)
Q Consensus 55 ~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~ 134 (263)
...+.......++.+-+.|+.|+|..+.+|......-...+.. +| -+.++....+.|+|.+..+...-.+++
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~------~N--~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF------PN--SYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh------cc--hHHHHHHHHHhhhhHHheecccceehh
Confidence 3344444445889999999999999999998877655553322 12 267888899999999999999999999
Q ss_pred hhcC-CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 135 RNFP-KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 135 ~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
|+.+ +++.+..++..+....+..+|+.+.-
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 9988 56899999998877666666655443
No 254
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=94.49 E-value=0.15 Score=48.35 Aligned_cols=66 Identities=8% Similarity=0.088 Sum_probs=47.8
Q ss_pred CCcccchhchHHH-HHHcCCCHHHHHHHHHHHHH-hhhh-hhHHHhhhcccC--hHHHHHHHHHHHHHHHH
Q 045446 28 GNNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDV-GKAF-GLLSGLASDRLP--TSAILIIGSLEGLIGYG 93 (263)
Q Consensus 28 ~~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~-~~~~-~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~ 93 (263)
...+.+..+.|.+ ++++|.++.+.+++.....+ +..+ .+++|++.||++ .|+....+.+...++.+
T Consensus 344 ~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~ 414 (633)
T TIGR00805 344 LAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYL 414 (633)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHH
Confidence 3445566677775 66799999999997666554 4455 789999999998 56777777666555544
No 255
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.36 E-value=0.51 Score=42.52 Aligned_cols=123 Identities=16% Similarity=0.167 Sum_probs=79.5
Q ss_pred cCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCchHHHHHHHHHH
Q 045446 44 MALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEK-----IHPLPYWQMCIFLCM 117 (263)
Q Consensus 44 ~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~-----~~~~~~~~l~~~~~l 117 (263)
.|+|++..+.+.....++..+ .....+..-+..-|+++....+...+..+.-....... .++. +..+.--.+
T Consensus 250 p~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~--~f~lgd~~l 327 (433)
T PF03092_consen 250 PHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ--WFALGDTIL 327 (433)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe--EEEEEhHHH
Confidence 348888888877777777766 45555555566778888777766555444111101110 0111 112222444
Q ss_pred HhhchhhhhhhHHHHHhhhcCC-CCCchHHHHHhhhhhHHHHHHHHHHHhhC
Q 045446 118 GGNSTTWMNTAVLVTCMRNFPK-NRGPVSGILKGYVGLSTAIFTDICTALFS 168 (263)
Q Consensus 118 ~g~g~~~~~~~~~~~~~~~fp~-~rg~~~gi~~~~~~lg~~i~~~l~~~l~~ 168 (263)
..+....-+-+.....+|..|+ ..|+..++..+..++|..+...++..+.+
T Consensus 328 ~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 328 EEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555666778889999994 58999999999999999888888877653
No 256
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.62 E-value=6.3 Score=36.92 Aligned_cols=163 Identities=13% Similarity=0.004 Sum_probs=93.8
Q ss_pred CchhHHHHHHHHHHHHhh-CCcccc-hhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc-ChHHHHHHHH
Q 045446 10 PAAKWLGFVTAIWVQATC-GNNYTF-SNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL-PTSAILIIGS 85 (263)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~~g~ 85 (263)
++..|............- ...|++ ......+.+++|.+..++.-......-.... .+.+++++|-| ||-+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 444566544444333322 334444 2334556778888876666644444433444 68899999986 8889999999
Q ss_pred HHHHHHHHHHHHHHhccC---------------CCch---HHHHHHHHHHHhhchhhhhhhHHHHHhhhcCC-C----CC
Q 045446 86 LEGLIGYGVQWLVVSEKI---------------HPLP---YWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPK-N----RG 142 (263)
Q Consensus 86 ~~~~~g~~~~~~~~~~~~---------------~~~~---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~-~----rg 142 (263)
++..+|.+++........ +..+ ...++....+..+|.|..-+.....-.+.|++ + +.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 888888655543332210 0011 12345556667788998888888888999972 1 23
Q ss_pred --chHHHHHhhhhhHHHHHHHHHHHhhCCChh
Q 045446 143 --PVSGILKGYVGLSTAIFTDICTALFSSKPS 172 (263)
Q Consensus 143 --~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~ 172 (263)
.-..........|..+...+..+.=++..|
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w 223 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGW 223 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 223333444445555554444444244333
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=93.15 E-value=0.17 Score=46.21 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=44.4
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHH
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIG 91 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g 91 (263)
...+.+-+++|+++.+.+.+....-+...+ .|++|.++||+-+||-+++|..+..+.
T Consensus 32 pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~ 89 (618)
T KOG3762|consen 32 PLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVT 89 (618)
T ss_pred hHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 445667788999999999977777777777 999999999998877777666554433
No 258
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=91.65 E-value=0.56 Score=42.19 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=69.5
Q ss_pred cccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHHhhhccc-------ChHHHHHHHHHHHHHHHHHHHHHHhc
Q 045446 30 NYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSGLASDRL-------PTSAILIIGSLEGLIGYGVQWLVVSE 101 (263)
Q Consensus 30 ~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-------G~r~~~~~g~~~~~~g~~~~~~~~~~ 101 (263)
.|-.+.+.+...+-.|.+.++..++......+..+ .+.+|.++||+ ++.+.-.+.+.+.+..++++......
T Consensus 264 sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~ 343 (493)
T KOG1330|consen 264 SWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA 343 (493)
T ss_pred chhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHh
Confidence 33334444444444566666666677777777777 78889999993 23333333333222222222111111
Q ss_pred cCCCchHHHHHHHHHHHhhchhhh-hhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHH-HHHHhhC
Q 045446 102 KIHPLPYWQMCIFLCMGGNSTTWM-NTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTD-ICTALFS 168 (263)
Q Consensus 102 ~~~~~~~~~l~~~~~l~g~g~~~~-~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~-l~~~l~~ 168 (263)
.. ..+.+. ....++.|.-.... .....-+..+..| ++|.++.++......+-+-.+++ +.+.+-+
T Consensus 344 ~~-~~s~~~-~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 344 FT-SSSMIF-GLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred hh-hHHHHH-HHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 11 112222 22233344333332 3333456667777 77999998887665544433333 6555543
No 259
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.31 E-value=12 Score=34.46 Aligned_cols=131 Identities=14% Similarity=0.050 Sum_probs=79.5
Q ss_pred HHHHHHc---CCCHHHHHHHHHHHHHhhh--hhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhcc----CCCc--
Q 045446 38 DALKSLM---ALTQLQLNNLSVAKDVGKA--FGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEK----IHPL-- 106 (263)
Q Consensus 38 p~l~~~~---~~s~~~~~~i~~~~~~~~~--~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~----~~~~-- 106 (263)
..+++.+ ..+++....+=+...+-.. +.....+++||+++++++-+-...+..-+.++...+... .++.
T Consensus 44 R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~ 123 (491)
T PF03219_consen 44 RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFA 123 (491)
T ss_pred HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHH
Confidence 4445443 2356666665554444333 377899999999999999887776666666555443221 1110
Q ss_pred ------------------hHHHHHHHHHHHhhchhhhhh-hHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHh
Q 045446 107 ------------------PYWQMCIFLCMGGNSTTWMNT-AVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTAL 166 (263)
Q Consensus 107 ------------------~~~~l~~~~~l~g~g~~~~~~-~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l 166 (263)
+.|...++.+..-+-.....+ .-.....|.++ ++-.|-.++...+.++|..+++.+...+
T Consensus 124 ~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 124 DKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222222222211122222 23567788887 7788899999999999999998888877
Q ss_pred hC
Q 045446 167 FS 168 (263)
Q Consensus 167 ~~ 168 (263)
.+
T Consensus 204 ~~ 205 (491)
T PF03219_consen 204 SS 205 (491)
T ss_pred HH
Confidence 66
No 260
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.00 E-value=2.1 Score=38.13 Aligned_cols=113 Identities=12% Similarity=0.012 Sum_probs=72.2
Q ss_pred CHHHHHHHHHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhh
Q 045446 47 TQLQLNNLSVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMN 126 (263)
Q Consensus 47 s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~ 126 (263)
..++-.+....+-+|..++=-...+. |+ |++.+...+...-..+...-+...+.+ +.|.+++..+..|+-.|..+
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~-ri--r~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF-RI--RRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee-eh--hhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhhhHHH
Confidence 34555666777776655422222222 33 556665555443333333222333333 45777777888899999999
Q ss_pred hhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHH
Q 045446 127 TAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICT 164 (263)
Q Consensus 127 ~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~ 164 (263)
..+...+.|..| ++|..++|.....-+.|..++..++-
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 999998898888 78999999998888777776665554
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=89.81 E-value=14 Score=32.93 Aligned_cols=59 Identities=14% Similarity=-0.020 Sum_probs=39.5
Q ss_pred HHhhCCcccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhc-----ccChHHHHHH
Q 045446 24 QATCGNNYTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASD-----RLPTSAILII 83 (263)
Q Consensus 24 ~~~~~~~~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~D-----r~G~r~~~~~ 83 (263)
-..-|..++..-..|.+-+.-|.|-++.+..+.++- -..+-+.+..+.| |+||||.-++
T Consensus 40 YllQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~-P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 40 YLLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYW-PFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred HHHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhh-HHHHHHHHHhhhHHHHHHhhccccceee
Confidence 345677777666778888888888887776544332 1223556667777 9999986544
No 262
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=89.12 E-value=0.12 Score=47.98 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=0.0
Q ss_pred cccchhchHHH-HHHcCCCHHHHHHHHHHHHH-hhhh-hhHHHhhhcccCh--HHHHHHHHHHHHHHHHH---HHHHHhc
Q 045446 30 NYTFSNYSDAL-KSLMALTQLQLNNLSVAKDV-GKAF-GLLSGLASDRLPT--SAILIIGSLEGLIGYGV---QWLVVSE 101 (263)
Q Consensus 30 ~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~-~~~~-~~~~G~l~Dr~G~--r~~~~~g~~~~~~g~~~---~~~~~~~ 101 (263)
..++..|.|.+ +++|+.++++++.+.-...+ +..+ .+++|++..|+.. |+......+...++.+. ..+.-|.
T Consensus 321 ~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~ 400 (539)
T PF03137_consen 321 VSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCP 400 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCC
Confidence 34567788875 78899999999995544444 4556 7899999999864 44443333332222221 2221221
Q ss_pred cCC-------C-------------------------------------chHHHHHHHHHHHhhchhhhhhhHHHHHhhhc
Q 045446 102 KIH-------P-------------------------------------LPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNF 137 (263)
Q Consensus 102 ~~~-------~-------------------------------------~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~f 137 (263)
..+ . ..+..+++..++.-+..+....+...+..+..
T Consensus 401 ~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V 480 (539)
T PF03137_consen 401 NPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCV 480 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccC
Confidence 100 0 01122222233334445555666777777888
Q ss_pred C-CCCCchHHHHHhhhh-hHHHHHHHHHHHhhCC
Q 045446 138 P-KNRGPVSGILKGYVG-LSTAIFTDICTALFSS 169 (263)
Q Consensus 138 p-~~rg~~~gi~~~~~~-lg~~i~~~l~~~l~~~ 169 (263)
| ++|..|+|+...... +|..-+|.+.+.++|.
T Consensus 481 ~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 481 PPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------
T ss_pred ChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 8 779999999986655 5667778888888875
No 263
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.01 E-value=0.92 Score=40.81 Aligned_cols=131 Identities=10% Similarity=0.014 Sum_probs=77.1
Q ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHhhh-hhhHHHhhhcc----cChHHHHHHH-HHHHHHHHHHHHHHHh-c--cCCC
Q 045446 35 NYSDALKSLMALTQLQLNNLSVAKDVGKA-FGLLSGLASDR----LPTSAILIIG-SLEGLIGYGVQWLVVS-E--KIHP 105 (263)
Q Consensus 35 ~~~p~l~~~~~~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr----~G~r~~~~~g-~~~~~~g~~~~~~~~~-~--~~~~ 105 (263)
.|.|++.++.|.+..-.+.+=....+... ++|+.|..+|| |||||-++.. ....+++.+++..+-. + .-++
T Consensus 53 sy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred ccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 34577888899998887775444444444 49999999996 7887666554 4455555553321110 0 0011
Q ss_pred chH--HHHHHHHHHHh-----hchhhhhhhHHHHHhhhcC-CCCCc-hHHHHHhhhhhHHHHHHHHHHH
Q 045446 106 LPY--WQMCIFLCMGG-----NSTTWMNTAVLVTCMRNFP-KNRGP-VSGILKGYVGLSTAIFTDICTA 165 (263)
Q Consensus 106 ~~~--~~l~~~~~l~g-----~g~~~~~~~~~~~~~~~fp-~~rg~-~~gi~~~~~~lg~~i~~~l~~~ 165 (263)
... -..-+..++.| +..-..+.++=+...+... ++|-+ +.+....+.++|+.++-.++.+
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 111 00111122222 3333455666777788774 44444 9999999999999888776653
No 264
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=87.67 E-value=20 Score=31.99 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=46.4
Q ss_pred cCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CC-CCchHHHHHhhhhhHHHHHHHHHHHhhCC--ChhHHHHH
Q 045446 102 KIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KN-RGPVSGILKGYVGLSTAIFTDICTALFSS--KPSAFLLI 177 (263)
Q Consensus 102 ~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~-rg~~~gi~~~~~~lg~~i~~~l~~~l~~~--~~~~~~~~ 177 (263)
......++..++.-.+.+.+.+..+...+.... .+| |. ++...|-. ..|.-.++.-.+.....++ .....++.
T Consensus 111 ~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~ytqavm~G~a--~aG~l~Sl~~i~tka~~~~~~~sA~~yF~ 187 (406)
T KOG1479|consen 111 TWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYTQAVMSGQA--LAGTLTSLLRILTKAAFSDSRTSALIYFI 187 (406)
T ss_pred CccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHHHHHHhcch--hHhHHHHHHHHHHHHhcCCCCceeehhHH
Confidence 333444566666667777788887777776655 467 43 33222222 2222233333344444444 33445666
Q ss_pred HHHHHHHHHHHHHh
Q 045446 178 LAIVPAVICLTAVL 191 (263)
Q Consensus 178 ~~~~~~~~~~~~~~ 191 (263)
.+.+..+++++...
T Consensus 188 ~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 188 TSTVILLLCFVLYL 201 (406)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666667776666
No 265
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=81.79 E-value=3.2 Score=37.89 Aligned_cols=55 Identities=16% Similarity=0.296 Sum_probs=44.3
Q ss_pred HHHHhhchhhhhhhHHHHHhhhc-CCCCCchHHHHHhhhhhHHHHHHHHHHHhhCC
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNF-PKNRGPVSGILKGYVGLSTAIFTDICTALFSS 169 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~f-p~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~ 169 (263)
-++.|.+...+.....+.-+|.. |++++++.|........+..++|.+.......
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~ 450 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL 450 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh
Confidence 45567777777778888888888 58899999999988888888888877766654
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.64 E-value=25 Score=31.81 Aligned_cols=51 Identities=10% Similarity=0.080 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCchHHHHHhhhhhHHHHHHH
Q 045446 107 PYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPVSGILKGYVGLSTAIFTD 161 (263)
Q Consensus 107 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~~gi~~~~~~lg~~i~~~ 161 (263)
.++..++.-++.|++.+..+........ .||++ .++....+.++++.+...
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~---~~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST---YSSAVMSGQGLAGVLTSL 155 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH---HHHHHHhcchhHHHHHHH
Confidence 3555666677788888888877777765 67843 344444555555555433
No 267
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=78.42 E-value=1.3 Score=35.84 Aligned_cols=92 Identities=12% Similarity=0.083 Sum_probs=55.4
Q ss_pred HHhhhcccChH--------HHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCC
Q 045446 68 SGLASDRLPTS--------AILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPK 139 (263)
Q Consensus 68 ~G~l~Dr~G~r--------~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~ 139 (263)
.+.+.||||.+ -+++.|.+..++-.-++.-....... .+. ...-.-.|+|.+.+++++...+.+.+|+
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~-fhP---~ALAMasGvGSgSMMaAa~~aL~~~~P~ 202 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGI-FHP---YALAMASGVGSGSMMAAASGALAAAYPE 202 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccC-CCH---HHHHHHcCCcHHHHHHHHHHHHHHHCcc
Confidence 46788999842 23445544433333222221222111 111 1222346899999999999999999998
Q ss_pred CCCchHHHHHhhhhhHHHHHHHHH
Q 045446 140 NRGPVSGILKGYVGLSTAIFTDIC 163 (263)
Q Consensus 140 ~rg~~~gi~~~~~~lg~~i~~~l~ 163 (263)
......++..+.+-+.+..+..+.
T Consensus 203 ~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 203 MADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788888777766666654443
No 268
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=75.05 E-value=37 Score=31.32 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=60.4
Q ss_pred HHHHHHHhhh-hhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHH
Q 045446 54 LSVAKDVGKA-FGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVT 132 (263)
Q Consensus 54 i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~ 132 (263)
+-....+.++ ..+..|++-.++.+.--+.++.....-+-.++ +.+..+ +.|..++..++.+..-.+..+.+..-
T Consensus 303 veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~---~m~~t~--~Iw~~Y~~yvlf~~~y~flitia~~~ 377 (511)
T TIGR00806 303 VDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVF---WMSQSH--DIWVLYVTYVLFRGIYQFLVPIATFQ 377 (511)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhh---hhhccc--chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444 48889988777755444444444333333322 334333 56888888888887788888888888
Q ss_pred HhhhcCCCC-CchHHHHHhhh
Q 045446 133 CMRNFPKNR-GPVSGILKGYV 152 (263)
Q Consensus 133 ~~~~fp~~r-g~~~gi~~~~~ 152 (263)
+.+...+++ |...|+++...
T Consensus 378 iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 378 IASSLSKELCALVFGINTFVA 398 (511)
T ss_pred HHHHhcccceEEEEecHHHHH
Confidence 888888554 88888887543
No 269
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=74.68 E-value=66 Score=29.10 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHH
Q 045446 51 LNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSL 86 (263)
Q Consensus 51 ~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~ 86 (263)
.+.....-.+...+ ++..|...||..|.++...+.+
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 33344444444444 8999999999999988777754
No 270
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=70.30 E-value=90 Score=28.76 Aligned_cols=132 Identities=10% Similarity=-0.012 Sum_probs=81.6
Q ss_pred HHHHHHcCCC---HHHHHHHHHHHHH-hhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccC----CC---
Q 045446 38 DALKSLMALT---QLQLNNLSVAKDV-GKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKI----HP--- 105 (263)
Q Consensus 38 p~l~~~~~~s---~~~~~~i~~~~~~-~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~----~~--- 105 (263)
..+++.+-.+ ++...++=+...+ .+.+ .++..++.++..+++++-.-...+...+++++..+.... ++
T Consensus 47 R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 47 RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 5567776544 4555555555554 3333 889999999999999999888887777776666554110 11
Q ss_pred --------c----------hHHHHHHHHHHHhhchhhhhh-hHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHH
Q 045446 106 --------L----------PYWQMCIFLCMGGNSTTWMNT-AVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDICTA 165 (263)
Q Consensus 106 --------~----------~~~~l~~~~~l~g~g~~~~~~-~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~ 165 (263)
+ +-|...++....=.=.....+ .-.....|.+. |+-.|-.+..+...+++..+.+.+...
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 002222222221111122212 22456677777 677888999998888888888888887
Q ss_pred hhCC
Q 045446 166 LFSS 169 (263)
Q Consensus 166 l~~~ 169 (263)
+.++
T Consensus 207 ~~k~ 210 (509)
T COG3202 207 LSKH 210 (509)
T ss_pred Hhhc
Confidence 7653
No 271
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=68.95 E-value=4.9 Score=36.35 Aligned_cols=32 Identities=19% Similarity=0.062 Sum_probs=24.8
Q ss_pred hhhhhHHHhhhcccChHHHHHHHHHHHHHHHH
Q 045446 62 KAFGLLSGLASDRLPTSAILIIGSLEGLIGYG 93 (263)
Q Consensus 62 ~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~ 93 (263)
...+....++.||+|.|+.+..+...+.++..
T Consensus 346 gi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~ 377 (498)
T KOG0637|consen 346 GIYSLLVEKLSRKFGTRKRYWGGVNAFGLATG 377 (498)
T ss_pred HHHHHHHHHHHHhcCcceEEeehhHHHHHHHH
Confidence 34478889999999988888877776666665
No 272
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=65.30 E-value=24 Score=26.89 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=42.6
Q ss_pred HHhhhcccChHHHHHHHHH-HHHHHHHHHHHHHh-ccCCCchHHH-HHHHHHHHhhchhhhhhhHHHHHh-hhcCCCCCc
Q 045446 68 SGLASDRLPTSAILIIGSL-EGLIGYGVQWLVVS-EKIHPLPYWQ-MCIFLCMGGNSTTWMNTAVLVTCM-RNFPKNRGP 143 (263)
Q Consensus 68 ~G~l~Dr~G~r~~~~~g~~-~~~~g~~~~~~~~~-~~~~~~~~~~-l~~~~~l~g~g~~~~~~~~~~~~~-~~fp~~rg~ 143 (263)
.=.++||.-||..+..|.= ...++.+..++.+. ......+.|. ++....+.|.|.- ..++.+++ .|=|++.|.
T Consensus 54 P~~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GS 130 (153)
T PF11947_consen 54 PEVVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGS 130 (153)
T ss_pred CHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCC
Confidence 3457888888877766642 23333333332232 2111122233 3333444443332 23444444 454577899
Q ss_pred hHHHHHhhhhhH
Q 045446 144 VSGILKGYVGLS 155 (263)
Q Consensus 144 ~~gi~~~~~~lg 155 (263)
..|+-..-.+++
T Consensus 131 llG~~e~~~N~~ 142 (153)
T PF11947_consen 131 LLGWEEFKRNWG 142 (153)
T ss_pred cccHHHHHHhHH
Confidence 999887655554
No 273
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=65.09 E-value=69 Score=27.90 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=61.8
Q ss_pred hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHHHHhhhcCCCCCch
Q 045446 65 GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPV 144 (263)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp~~rg~~ 144 (263)
.+.+....||+.--+=..+..+.-+.+++ +-+++.+ .++-+.+-.+..++.|.....-.... ..+| ..+
T Consensus 79 Kl~~Pff~~rfpf~~Ri~~~v~~sa~s~~-----lVafs~s--~~~sL~GV~~aSissGlGEiTFL~ls-s~Y~---~~~ 147 (409)
T KOG3880|consen 79 KLTAPFFIHRFPFGFRIALVVLLSALSFF-----LVAFSNS--VPMSLLGVVFASISSGLGEITFLALS-SRYP---SIV 147 (409)
T ss_pred HHhchhhhhhcccchHHHHHHHHHhcceE-----EEEeccc--hhHHHhhhhhhhhcCCcceeehhhhh-ccCC---Cce
Confidence 56677888887532222223344455555 4455543 35555566677777776655444443 3334 223
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhCC---ChhHHHHHHHHHHHHHHHHHHhhccc
Q 045446 145 SGILKGYVGLSTAIFTDICTALFSS---KPSAFLLILAIVPAVICLTAVLFLHE 195 (263)
Q Consensus 145 ~gi~~~~~~lg~~i~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (263)
..-+..+.|.++.+|..-+..+.+. .++...++....+.+.++.-.+.+++
T Consensus 148 i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 148 IAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred eccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 3334444455555655544444431 45566666666665554444434433
No 274
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=60.52 E-value=35 Score=33.00 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=40.5
Q ss_pred CcccchhchHHH-HHHcCCCHHHHHHHHHHHHHhh-hh-hhHHHhhhcccCh--HHHHHHHHH
Q 045446 29 NNYTFSNYSDAL-KSLMALTQLQLNNLSVAKDVGK-AF-GLLSGLASDRLPT--SAILIIGSL 86 (263)
Q Consensus 29 ~~~~~~~~~p~l-~~~~~~s~~~~~~i~~~~~~~~-~~-~~~~G~l~Dr~G~--r~~~~~g~~ 86 (263)
...++.+|.|.+ .++|+.+++++..+.....+.. .+ ..++|++..|+.. |.......+
T Consensus 407 ~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~ 469 (735)
T KOG3626|consen 407 AITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIV 469 (735)
T ss_pred HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHH
Confidence 344667788875 7889999999999665555554 45 5788999999854 444444333
No 275
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.45 E-value=35 Score=24.29 Aligned_cols=20 Identities=30% Similarity=0.272 Sum_probs=12.9
Q ss_pred hhhhhhHHHhhhccc-ChHHH
Q 045446 61 GKAFGLLSGLASDRL-PTSAI 80 (263)
Q Consensus 61 ~~~~~~~~G~l~Dr~-G~r~~ 80 (263)
+..++...||+.||| |.++-
T Consensus 55 GilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcH
Confidence 334477888899986 44443
No 276
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=50.22 E-value=85 Score=21.86 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=19.8
Q ss_pred HHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHH
Q 045446 54 LSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEG 88 (263)
Q Consensus 54 i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (263)
......++..+ ....|.+.|+.|.+..+.......
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (141)
T TIGR00880 92 MSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILA 127 (141)
T ss_pred HHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHH
Confidence 34444555555 556677777777666555544433
No 277
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=41.61 E-value=13 Score=31.22 Aligned_cols=51 Identities=16% Similarity=0.144 Sum_probs=33.8
Q ss_pred ccchhchHHHHHHcCCCHHHHHHHHHHHHHhhhh-hhHHH---------hhhcccChHHHH
Q 045446 31 YTFSNYSDALKSLMALTQLQLNNLSVAKDVGKAF-GLLSG---------LASDRLPTSAIL 81 (263)
Q Consensus 31 ~~~~~~~p~l~~~~~~s~~~~~~i~~~~~~~~~~-~~~~G---------~l~Dr~G~r~~~ 81 (263)
..|-.|.--+.++-+.++++...+....-+.-++ .++.| +=.||+|||+..
T Consensus 34 ScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 34 SCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3455555556777888888877766666555555 56554 346899998754
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=34.41 E-value=3.5e+02 Score=24.40 Aligned_cols=93 Identities=15% Similarity=0.060 Sum_probs=58.6
Q ss_pred HHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhHHH
Q 045446 53 NLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAVLV 131 (263)
Q Consensus 53 ~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~ 131 (263)
.+-....+.+++ ....|++-.++.+..-+.++..-...+..++ ..+..+ +.|..+++.++.+...-.+.+.+..
T Consensus 289 ~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~---lm~~t~--~Iwv~Y~~yIif~~~y~fliTiA~~ 363 (412)
T PF01770_consen 289 AVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLF---LMSFTG--NIWVCYAGYIIFRSLYMFLITIASF 363 (412)
T ss_pred HHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHH---HHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555554 8888999888888766666655444443333 223322 5677887777766666666777777
Q ss_pred HHhhhcCCC-CCchHHHHHh
Q 045446 132 TCMRNFPKN-RGPVSGILKG 150 (263)
Q Consensus 132 ~~~~~fp~~-rg~~~gi~~~ 150 (263)
-+++...++ -|.+.|++..
T Consensus 364 qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 364 QIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHhccccceeeeeeeHHH
Confidence 777777744 5777777764
No 279
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=32.23 E-value=3.3e+02 Score=23.41 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=20.8
Q ss_pred hhhcC-CCCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHH
Q 045446 134 MRNFP-KNRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAV 184 (263)
Q Consensus 134 ~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 184 (263)
.--+| ..+|..-=....++|.....+..... +....+..+..+.+..+
T Consensus 139 gGp~PlgY~gLGEi~~~vffG~l~v~g~~yiq---t~~~~~~~ll~slp~gi 187 (303)
T COG1575 139 GGPFPLGYMGLGEIFVGVFFGPLIVLGAYYIQ---TGRLSWAILLPSLPVGI 187 (303)
T ss_pred cCCcCcccCCHHHHHHHHHHHHHHHHHHHHHh---cccchHHHHHHHHHHHH
Confidence 44556 55555444444444444433333222 22333344444544433
No 280
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.83 E-value=3.5e+02 Score=23.60 Aligned_cols=17 Identities=29% Similarity=0.272 Sum_probs=9.2
Q ss_pred hhHHHHHHHHHHHhhCC
Q 045446 153 GLSTAIFTDICTALFSS 169 (263)
Q Consensus 153 ~lg~~i~~~l~~~l~~~ 169 (263)
+-.+.++-++...+..+
T Consensus 104 ~N~~~lglpi~~~l~g~ 120 (385)
T PF03547_consen 104 GNTGFLGLPILQALFGE 120 (385)
T ss_pred CcchhhHHHHHHHHhcc
Confidence 34445555566656554
No 281
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=31.60 E-value=2.1e+02 Score=27.46 Aligned_cols=77 Identities=12% Similarity=0.038 Sum_probs=39.8
Q ss_pred HHHHhhchhhhhhhHHHHHhhhcCC-CCCchHHHHHhhhhhHHHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHh
Q 045446 115 LCMGGNSTTWMNTAVLVTCMRNFPK-NRGPVSGILKGYVGLSTAIFTDICTALFSSKPSAFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 115 ~~l~g~g~~~~~~~~~~~~~~~fp~-~rg~~~gi~~~~~~lg~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (263)
..+.+.|..+......-..-+..|+ -|..+.++..+..++|..+...+...=.....|.-++..+.+..++.++..+
T Consensus 572 ~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 649 (654)
T TIGR00926 572 YVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVVMAIFSI 649 (654)
T ss_pred HHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555544444444445563 3677777777777777766655554332223333344444444444444443
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=31.21 E-value=2.1e+02 Score=25.87 Aligned_cols=54 Identities=11% Similarity=0.151 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhchhhhhhhHHHHHhhhcC-CCCCchHHHHHhhhhhHHHHHHHH
Q 045446 109 WQMCIFLCMGGNSTTWMNTAVLVTCMRNFP-KNRGPVSGILKGYVGLSTAIFTDI 162 (263)
Q Consensus 109 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~fp-~~rg~~~gi~~~~~~lg~~i~~~l 162 (263)
+..++..++.|+..|...+.++....+..+ ++|-.+-.+...+-.+|-.+|..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566888899999988888888888776 567766666666655555555443
No 283
>COG2119 Predicted membrane protein [Function unknown]
Probab=31.02 E-value=2.7e+02 Score=22.04 Aligned_cols=28 Identities=32% Similarity=0.299 Sum_probs=21.4
Q ss_pred hhHHHhhhcccChHHHHHHHHHHHHHHH
Q 045446 65 GLLSGLASDRLPTSAILIIGSLEGLIGY 92 (263)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~ 92 (263)
...+.+++||+..|++-.++.+++.+-.
T Consensus 151 Vl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 151 VLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 3456699999999999988877665433
No 284
>PRK10692 hypothetical protein; Provisional
Probab=28.52 E-value=1.9e+02 Score=19.64 Aligned_cols=17 Identities=12% Similarity=0.139 Sum_probs=7.7
Q ss_pred hHHHHHHHHHHHHHHHH
Q 045446 77 TSAILIIGSLEGLIGYG 93 (263)
Q Consensus 77 ~r~~~~~g~~~~~~g~~ 93 (263)
||....+|.+++.+|.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 34444444444444443
No 285
>PRK13499 rhamnose-proton symporter; Provisional
Probab=28.30 E-value=4.1e+02 Score=23.31 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045446 174 FLLILAIVPAVICLTAV 190 (263)
Q Consensus 174 ~~~~~~~~~~~~~~~~~ 190 (263)
...+.++...++++...
T Consensus 135 ~~~~~gv~liliGi~l~ 151 (345)
T PRK13499 135 RMTLLGVLVALIGVAIV 151 (345)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555555545444433
No 286
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=25.73 E-value=4.1e+02 Score=22.41 Aligned_cols=12 Identities=17% Similarity=0.252 Sum_probs=5.2
Q ss_pred HHHhhcccccch
Q 045446 229 FDITGNHGHVLS 240 (263)
Q Consensus 229 ~~~~~~~~~~~~ 240 (263)
+...++..+.+.
T Consensus 153 Y~~~~~~~~~~~ 164 (269)
T PF06800_consen 153 YSVIPKAFHVSG 164 (269)
T ss_pred HHHHHHhcCCCh
Confidence 344444444333
No 287
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=25.65 E-value=1.9e+02 Score=19.53 Aligned_cols=17 Identities=12% Similarity=0.215 Sum_probs=7.7
Q ss_pred hHHHHHHHHHHHHHHHH
Q 045446 77 TSAILIIGSLEGLIGYG 93 (263)
Q Consensus 77 ~r~~~~~g~~~~~~g~~ 93 (263)
||....+|..++.+|.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMV 19 (89)
T ss_pred chhhHHHhhHHHHHhHH
Confidence 34444444444444443
No 288
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.26 E-value=4e+02 Score=21.14 Aligned_cols=9 Identities=22% Similarity=-0.042 Sum_probs=3.8
Q ss_pred hhhhhcccc
Q 045446 254 PLAVPLYVI 262 (263)
Q Consensus 254 ~~~~~~~~~ 262 (263)
++....|++
T Consensus 192 ~~~~~lkkk 200 (206)
T PF06570_consen 192 ALRFYLKKK 200 (206)
T ss_pred HHHHHHHHH
Confidence 334444443
No 289
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=21.83 E-value=2.8e+02 Score=21.07 Aligned_cols=31 Identities=10% Similarity=-0.128 Sum_probs=16.2
Q ss_pred HHhhcccccchHHHHHHHHHHHHHhhhhhcc
Q 045446 230 DITGNHGHVLSLYFAVGLIFLLALPLAVPLY 260 (263)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 260 (263)
.....++++..........+++...+...+|
T Consensus 53 m~~spy~G~~s~~~ftv~fv~m~~~llfDI~ 83 (155)
T PF10777_consen 53 MYYSPYFGLGSVWGFTVFFVVMAAFLLFDIK 83 (155)
T ss_pred HHhcchhhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 4445566555544445555555555555554
No 290
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.81 E-value=1.5e+02 Score=19.57 Aligned_cols=11 Identities=18% Similarity=0.108 Sum_probs=5.6
Q ss_pred HHHHHHHHhhC
Q 045446 158 IFTDICTALFS 168 (263)
Q Consensus 158 i~~~l~~~l~~ 168 (263)
+.+.+.|++.+
T Consensus 22 iisfi~Gy~~q 32 (76)
T PF06645_consen 22 IISFIVGYITQ 32 (76)
T ss_pred HHHHHHHHHHH
Confidence 33455555554
No 291
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=21.71 E-value=1.2e+02 Score=20.30 Aligned_cols=28 Identities=11% Similarity=0.196 Sum_probs=19.0
Q ss_pred HHHHhhhhhhHHHhhhcccChHHHHHHH
Q 045446 57 AKDVGKAFGLLSGLASDRLPTSAILIIG 84 (263)
Q Consensus 57 ~~~~~~~~~~~~G~l~Dr~G~r~~~~~g 84 (263)
...++..+...+-++..|.|+|++-+.+
T Consensus 9 l~~lgG~IA~~GD~iG~kvGKkrlslFg 36 (79)
T PF11283_consen 9 LLLLGGLIAYLGDRIGSKVGKKRLSLFG 36 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhc
Confidence 3344445577777888888888886554
No 292
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=21.52 E-value=1.4e+02 Score=25.94 Aligned_cols=19 Identities=26% Similarity=0.356 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 045446 173 AFLLILAIVPAVICLTAVL 191 (263)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~ 191 (263)
++.++++....+++++...
T Consensus 286 ~~ly~~af~lIiiG~vvy~ 304 (334)
T PF06027_consen 286 SWLYILAFALIIIGFVVYN 304 (334)
T ss_pred cHHHHHHHHHHHHHhheEE
Confidence 3455566555555555543
No 293
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=21.30 E-value=3.1e+02 Score=23.76 Aligned_cols=61 Identities=15% Similarity=-0.009 Sum_probs=42.9
Q ss_pred hchHHHHHHcCCC-HHH----HHHHHHHHHHhhhh-hhHHHhhhcccChHHHHHHHHHHHHHHHHHH
Q 045446 35 NYSDALKSLMALT-QLQ----LNNLSVAKDVGKAF-GLLSGLASDRLPTSAILIIGSLEGLIGYGVQ 95 (263)
Q Consensus 35 ~~~p~l~~~~~~s-~~~----~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~ 95 (263)
...|...++++-+ +.+ .+|.....++|..+ ....+++-|++|....+.+..+...++...+
T Consensus 53 ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 53 NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 3345556666544 233 23667777888887 5688999999999999999888877777654
No 294
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=21.00 E-value=4.3e+02 Score=23.34 Aligned_cols=86 Identities=7% Similarity=-0.114 Sum_probs=47.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 045446 39 ALKSLMALTQLQLNNLSVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMG 118 (263)
Q Consensus 39 ~l~~~~~~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (263)
.+|...+.|..+.+......... ....+.+.+..++|-|.++.++......-.. ...- +.+..+.-...+.
T Consensus 50 nlq~~vn~~lg~~sl~~~y~~l~-~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA------~Nl~--pr~~tlVPa~~~~ 120 (390)
T KOG3097|consen 50 NLQTSVNYDLGTVSLGALYLSLI-DSSMFMPLLIRFLGTKWTMVLAVFPYALYIA------ANLE--PRYETLVPAGLVL 120 (390)
T ss_pred HHHHHHhcCcccchhhhhhHHHH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH------hhcc--hhHHhhccHHHhh
Confidence 35555555544444433332222 2244555899999999998875544322111 1121 2455566667778
Q ss_pred hhchhhhhhhHHHHH
Q 045446 119 GNSTTWMNTAVLVTC 133 (263)
Q Consensus 119 g~g~~~~~~~~~~~~ 133 (263)
|+|.+-.+..--+++
T Consensus 121 G~aa~p~W~SkgtYl 135 (390)
T KOG3097|consen 121 GMAAGPIWASKGTYL 135 (390)
T ss_pred ccccccccccCccee
Confidence 888877765544333
No 295
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=20.04 E-value=6.1e+02 Score=22.35 Aligned_cols=108 Identities=8% Similarity=-0.083 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhhcccChHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhchhhhhhhH
Q 045446 50 QLNNLSVAKDVGKAFGLLSGLASDRLPTSAILIIGSLEGLIGYGVQWLVVSEKIHPLPYWQMCIFLCMGGNSTTWMNTAV 129 (263)
Q Consensus 50 ~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~ 129 (263)
|--|..+.+-+|..+.=-+..+... +.+......-+.-..+.+.-+...+.+ +.|...+..+..|.-+|..+...
T Consensus 289 qYRwyqvlYQlGVFiSRSS~~~~~~---p~l~~LailQ~vNl~ff~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNT 363 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFISRSSINLFTM---PYLWLLAILQFVNLLFFLLQAWYWFTP--SIWIVFALILFEGLLGGASYVNT 363 (409)
T ss_pred cchhhheeeeeeEEEEeccceEEec---hHHHHHHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHH
Confidence 4556666666665443333333322 333333333322222222222333333 44655555677788778888888
Q ss_pred HHHHhhhc-CCCCCchHHHHHhhhhhHHHHHHHH
Q 045446 130 LVTCMRNF-PKNRGPVSGILKGYVGLSTAIFTDI 162 (263)
Q Consensus 130 ~~~~~~~f-p~~rg~~~gi~~~~~~lg~~i~~~l 162 (263)
.--+.+.. |++|-.+++.....-.+|..+.+.+
T Consensus 364 f~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~l 397 (409)
T KOG3880|consen 364 FHNIHKETEPDVREFAMSAVSISDSIGIFLAGLL 397 (409)
T ss_pred HHHHhhcCCchHHHHhHhhheecchhhHHHHHHH
Confidence 77777655 4789999998876665665554443
Done!