BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045447
(2058 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4GSN8|NUA_ARATH Nuclear-pore anchor OS=Arabidopsis thaliana GN=NUA PE=1 SV=1
Length = 2093
Score = 2044 bits (5295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1163/2096 (55%), Positives = 1531/2096 (73%), Gaps = 82/2096 (3%)
Query: 1 MPLFVSDEEMSRLSNDAAAVAA-KADAYIRYLQTDFETVKARADAAAITAEQTCSLLEQK 59
MPLF+ DEE++RLS+DAA+V A +AD YIR + + ++V+A+ADAA+ITAEQTCSLLEQK
Sbjct: 1 MPLFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQK 60
Query: 60 FISLQEEFSKVESQNAQLQKSLDDRVNELAEVQSQKHQLHLQLIGKDGEIERLTMEVAEL 119
++SL ++FS +ESQNA+LQ DDR+ ELA+ Q+QKHQLHLQ I KDGE+ER++ E++EL
Sbjct: 61 YLSLSQDFSSLESQNAKLQSDFDDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSEL 120
Query: 120 HKSRRQLMELVEQKDLQHSEKGATIKAYLDKIINLTDNAAQREARLAETEAELARAQATC 179
HKS+RQLMEL+EQKD + SEK +TIK+YLDKI+ LTD ++++EARLAE AELAR+QA C
Sbjct: 121 HKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMC 180
Query: 180 TRLTQGKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSDVERQFSECSSSL 239
+RL+Q KEL ERH WL+EELT+KV+S ELRR H+DLE++MSAKL DVE+ + ECSSSL
Sbjct: 181 SRLSQEKELTERHAKWLDEELTAKVDSYAELRRRHSDLESEMSAKLVDVEKNYIECSSSL 240
Query: 240 NWNKERVRELEIKLSSLQEEFCSSKDAAAANEERFSTELSTVNKLVELYKESSEEWSRKA 299
NW+KER+RELE K+ SLQE+ S KDAA EE+++ EL T NKLV+LYKESSEEWSRKA
Sbjct: 241 NWHKERLRELETKIGSLQEDLSSCKDAATTTEEQYTAELFTANKLVDLYKESSEEWSRKA 300
Query: 300 GELEGVIKALETQLAQVQNDCKEKLEKEVSAREQLEKEAMDLKEKLEKCEAEIESSRKTN 359
GELEGVIKALE +L+QV++ KE+L+KEVS ++ LEKE DLK+KLEKCEAEIE +RKT+
Sbjct: 301 GELEGVIKALEARLSQVESSYKERLDKEVSTKQLLEKENGDLKQKLEKCEAEIEKTRKTD 360
Query: 360 ELNLLPLSSFSTETWMESFDTNNISEDNRLLVPKIPAGVSGTALAASLLRDGWSLAKIYA 419
ELNL+P S+F+ +++ T+N+ E+++ ++ K+PAGVSGTALAASLLRDGWSLAKIY
Sbjct: 361 ELNLIPFSNFTRR--VDNSGTSNMIEESQAVISKVPAGVSGTALAASLLRDGWSLAKIYE 418
Query: 420 KYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDAYSAINQKLQN 479
KYQEAVDA+RHEQLGRKE+E +LQRVL ELEEKAG I +ER EYER+V+AY +NQKLQ+
Sbjct: 419 KYQEAVDAMRHEQLGRKEAEMILQRVLSELEEKAGFIQEERGEYERVVEAYCLVNQKLQD 478
Query: 480 FISEKSSLEKTIQELKADLRMRERDYYLAQKEISDLQKQVTVLLKECRDIQLRCGLSRIE 539
+SE+S++EK I ELKADLR RER+ L QK+ISDLQKQVT+LLKECRD+QLRCG +R +
Sbjct: 479 SVSEQSNMEKFIMELKADLRRRERENTLLQKDISDLQKQVTILLKECRDVQLRCGAARDD 538
Query: 540 FDDDAVAIADVELAPESDAEKIISEHLLTFKDINGLVEQNVQLRSLVRNLSDQIESREME 599
+DD ++DVE+ ES+A+KIISEHLL FKDINGLVEQNV+LR+LVR+LS+QIESRE E
Sbjct: 539 DEDDYPLLSDVEMEMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESRETE 598
Query: 600 FKDKLELELKKHTDEAASKVAAVLDRAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSHTQ 659
K+ E++LK TDEA++KVA VL RAEEQG+MIESLHTSVAMYKRLYEEE KLHSS ++
Sbjct: 599 LKETFEVDLKNKTDEASAKVATVLKRAEEQGQMIESLHTSVAMYKRLYEEEQKLHSSDSR 658
Query: 660 YIEAAP---DGRKDLLLLLEGSQEATKRAQEKMAERVRCLEDDLGKARSEIIALRSERDK 716
+ +P GRK+ L LLE S+EATKRAQEK ER+R LE+D KARSE+IA+RSERDK
Sbjct: 659 SSDLSPAVVPGRKNFLHLLEDSEEATKRAQEKAFERIRILEEDFAKARSEVIAIRSERDK 718
Query: 717 LALEAEFAREKLDSVMREAEHQKVEVNGVLARNVEFSQLVVDYQRKLRETSESLNAAQEL 776
LA+EA FAREKL+ +M+E+E ++ E+N VLARN+EFSQL++D+QRKLRE+SESL+AA+E+
Sbjct: 719 LAMEANFAREKLEGIMKESERKREEMNSVLARNIEFSQLIIDHQRKLRESSESLHAAEEI 778
Query: 777 SRKLAMEVSVLKHEKEMLSNAEQRAYDEVRSLSQRVYRLQASLDTIQNAEEVREEARAAE 836
SRKL+MEVSVLK EKE+LSNAE+RA DEV +LSQRVYRLQA+LDT+Q+ EEVREE RAAE
Sbjct: 779 SRKLSMEVSVLKQEKELLSNAEKRASDEVSALSQRVYRLQATLDTVQSTEEVREETRAAE 838
Query: 837 RRKQEEYIKQVEREWAEAKKELQEERDNVRLLTSDREQTLKNAVKQVEEMGKELATALRA 896
RRKQEE+IKQ++REWAEAKKELQEER N R TSDR QTL NAV QVEEMGKELA AL+A
Sbjct: 839 RRKQEEHIKQLQREWAEAKKELQEERSNARDFTSDRNQTLNNAVMQVEEMGKELANALKA 898
Query: 897 VASAETRAAVAETKLSDMEKRIRPLDAKGDEVDDGS--RPSDE---VQLQVGKEELEKLK 951
V+ AE+RA+VAE +LSD+EK+IR D K ++D G SD+ ++L+ KEE+EKL+
Sbjct: 899 VSVAESRASVAEARLSDLEKKIRSSDPKTLDMDSGGIVSLSDKEMSIELRTAKEEIEKLR 958
Query: 952 EEAQANREHMLQYKSIAQVNEAALKEMETVHENFRTRVEGVKKSLEDELHSLRKRVSELE 1011
E ++++ HMLQYKSIAQVNE ALK+ME+ HENFR E ++SLE EL SLR+RVSELE
Sbjct: 959 GEVESSKSHMLQYKSIAQVNETALKQMESAHENFRLEAEKRQRSLEAELVSLRERVSELE 1018
Query: 1012 RENILKSEEIASAAGVREDALASAREEITSLKEERSIKISQIVNLEVQVSALKEDLEKEH 1071
+ I KSE++A+AA +EDAL SA EI SL+EE +K SQI + +Q+S LK DLE EH
Sbjct: 1019 NDCIQKSEQLATAAAGKEDALLSASAEIASLREENLVKKSQIEAMNIQMSTLKNDLETEH 1078
Query: 1072 ERRQAAQANYERQVILQSETIQELTKTSQALASLQEQASELRKLADALKAENSELKSKWE 1131
E+ + AQ NYERQVIL SETIQELTKTSQALA+LQE+ASELRKLADA ENSEL +KW
Sbjct: 1079 EKWRVAQRNYERQVILLSETIQELTKTSQALAALQEEASELRKLADARGIENSELNAKWS 1138
Query: 1132 LEKSVLEKLKNEAEEKYDEVNEQNKILHSRLEALHIQLTEKDGSSVRISSQSTDSNPIGD 1191
EK +LE+ KN AE+KY E+NEQNK+LHSRLEA H+ EK+ S ISS STDS+ + D
Sbjct: 1139 EEKLMLEQQKNLAEKKYHELNEQNKLLHSRLEAKHLNSAEKNSRSGTISSGSTDSDHLED 1198
Query: 1192 ASLQSVISFLRNRKSIAETEVALLTTEKLRLQKQLESALKAAENAQASLTTERANSRAML 1251
+ LQ V+ +LR K IAETE++L+ EKLRLQ QLESALK AE+A+ SLT ERA++RA L
Sbjct: 1199 SGLQRVVHYLRRTKEIAETEISLMRQEKLRLQSQLESALKMAESARGSLTAERASTRASL 1258
Query: 1252 LTEEEIKSLKLQVRELNLLRESNVQLREENKYNFEECQKLREVAQKTKSDCDNLENLLRE 1311
LT++ IKSL+LQV E+NLLRESN+QLREENK+NFE+CQ++REVAQK + + +N ENLL+
Sbjct: 1259 LTDDGIKSLQLQVSEMNLLRESNMQLREENKHNFEKCQEMREVAQKARMESENFENLLKT 1318
Query: 1312 RQIEIEACKKEMEKQRMEKENLEKRVSELLQRCRNIDVEDYDRLKVEVRQMEEKLSGKNA 1371
+Q E++ C KEMEK RME + +KRV EL + RNID+ DY+RLK EVRQ+EEKL K+A
Sbjct: 1319 KQTELDLCMKEMEKLRMETDLHKKRVDELRETYRNIDIADYNRLKDEVRQLEEKLKAKDA 1378
Query: 1372 EIEETRNLLSTKLDTISQLEQELANSRLELSEKEKRLSDISQAEAA-------RKLEMEK 1424
E+ + +L K + IS LE+EL N + +LSE+EKRL D QA+A +K E+EK
Sbjct: 1379 HAEDCKKVLLEKQNKISLLEKELTNCKKDLSEREKRLDDAQQAQATMQSEFNKQKQELEK 1438
Query: 1425 QKRISAQLRRKCEMLSKEKEESIKENQSLARQLDDLKQ--GKKSTGDVTGEQVMKEKEEK 1482
K+I L KEK+E K+NQSLA+QL++ K+ GK++T D EQ +KE+EEK
Sbjct: 1439 NKKIHYTLNMTKRKYEKEKDELSKQNQSLAKQLEEAKEEAGKRTTTDAVVEQSVKEREEK 1498
Query: 1483 DTRIQILERTVE-------RQREELKKEKDDNQKEKEKRLKGEKVMLDSAKLADQWKTRI 1535
+ RIQIL++ V ++ E+LKK+ ++ KE+ +R EK + DS + KT++
Sbjct: 1499 EKRIQILDKYVHQLKDEVRKKTEDLKKKDEELTKERSERKSVEKEVGDSLTKIKKEKTKV 1558
Query: 1536 SSE---LEQHKQAVKRLSDELEKLKHTEAGLPEGTSVVQLLSGTNLDDHASSYFSAVESF 1592
E LE+++ A+ LS+ELEKLKH + LPEGTS VQ+LSG+ L+D A++Y SAVE F
Sbjct: 1559 DEELAKLERYQTALTHLSEELEKLKHADGNLPEGTSAVQVLSGSILNDQAAAYVSAVEYF 1618
Query: 1593 ERVARSVIVELG-TCGPSE--TSLALDAAAAAATTGSAVATLAPVTASSAGPGTIHLPVK 1649
ERVARS+ + P++ T + AA +T + V + P+ S T LP
Sbjct: 1619 ERVARSIASNSQVSTKPTDMVTEPSSGIPAAEPSTMTRVPSSTPLIKSPVA-TTQQLPKV 1677
Query: 1650 ATDGKE-RVNLPKTNAETRKP-GRRLVRPRLKRPEES-QGDMETSEAEGSNITGKVAASH 1706
A+D KE R+ K + E R+P GRR+VRP+L +PEES + D++ EAEG+ GK A+H
Sbjct: 1678 ASDNKEKRLISQKPSTEFRRPSGRRIVRPQLVKPEESPKVDVDMPEAEGTGDEGKQPAAH 1737
Query: 1707 DAETQGNLALQS-QLSARKRPA-STTTELREESLSQGEPSSDVPAPVLKKSKLPDSSSED 1764
+ E+Q +++ Q RKR A S +E +++SL+QGE SS++ P KK+K +S +
Sbjct: 1738 EPESQVTTSVRPVQTLVRKRQADSLVSEPQQDSLTQGETSSEIAPPASKKAKGSESHPDT 1797
Query: 1765 AGGQSASPLEDTQPTTEESVEAVGDLAQGSNEEAVEAEKEEVDNTGEKAEEMKESHQVDT 1824
+ G++ + +P +E ++A D E+ E + +
Sbjct: 1798 SEGENLA----KEPAIDELMDATTT----------------TDGDNEETEAENAEEKTEE 1837
Query: 1825 TSEAELQNDKNDVLEENLDRPTGVEMACDDGSKDQAEQENQQLTLESESEREEGELLPDV 1884
EA+ N+ ++ +EE+ + ++ S+DQ E+ENQ+ + ES++EEGEL D
Sbjct: 1838 YVEAQQDNEADEPVEES--PTETETIPTEEESRDQTEEENQEPLTDMESDKEEGELDLDT 1895
Query: 1885 TE-VEGAADLSNVVGSPEIGELLPELVSTPVVSPGGNE---DEAPAS-EEPQE--AVNDE 1937
E +E D+++++ SPE E+ PE ++TP SP E +EA + E P E ++
Sbjct: 1896 LEDLEEGTDVASMMRSPEKEEVQPETLATPTQSPSRMETAMEEAETTIETPVEDDKTDEG 1955
Query: 1938 GDGTEENAEGLDKSNDGEEA---DQVPEGSVTTGETASTSSAIEPDISRQPSSSAT--TT 1992
GD EE A+ + +ND +EA D PE S T ST+ ++ +SS T
Sbjct: 1956 GDAAEEAADIPNNANDQQEAPETDIKPETSAATTSPVSTAPTTSSTLASAITSSGAPETE 2015
Query: 1993 EAKQASPPASNASHIVNLRERA----RERAMQRQAGAMPSTVIRGRGRPAGRGRGV 2044
+ K+A P +S IV L +RA RER P+ RG RGR V
Sbjct: 2016 DPKRAPSPGGGSSTIVTLADRAQMKRRERIANIVVSRAPNPATRG-----ARGRTV 2066
>sp|P12270|TPR_HUMAN Nucleoprotein TPR OS=Homo sapiens GN=TPR PE=1 SV=3
Length = 2363
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 301/1286 (23%), Positives = 604/1286 (46%), Gaps = 124/1286 (9%)
Query: 181 RLTQGKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSDVERQFSECSSSLN 240
RL Q KEL+ N WLN EL +K + L+ L R + ++ L + + + S +N
Sbjct: 182 RLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMN 241
Query: 241 WNKERVRELEIKLSSLQEEFCSSKDAAAANEERFSTELSTVNKLVELYKESSEEWSRKAG 300
K L+ + L + +K+ A+ EE+F EL+ KL LYK ++++ K+
Sbjct: 242 GLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSN 301
Query: 301 ELEGVIKALETQL---AQVQNDCKEKLEKEVSAREQLEKEAMDLKEKLEKCEAEIESSRK 357
EL ++ L L + ++ L + +++Q+EKE + EK+ + E E+E++
Sbjct: 302 ELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEML---EKIGRLEKELENA-- 356
Query: 358 TNELNLLPLSSFSTETWMESFDTNNISEDNRLLVPKIPAGVSGTALA-ASLLRDGWSLAK 416
N+L LS+ + + +SE+ A +S TA A A +++ G L +
Sbjct: 357 -NDL----LSATKRKGAI-------LSEEEL-------AAMSPTAAAVAKIVKPGMKLTE 397
Query: 417 IYAKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDAYSAINQK 476
+Y Y E D L E+L K L ++ E+E KA I+ +R EYER A ++++ K
Sbjct: 398 LYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVK 457
Query: 477 LQNFISEKSSLEKTIQELKADLRMRERDYYLAQKEISDLQKQVTVLLKECRDIQLRCGLS 536
L+ + E L++ + + ERD + ++ DL +Q+ VLL E + +
Sbjct: 458 LEQAMKEIQRLQEDTDKANKQSSVLERDNRRMEIQVKDLSQQIRVLLMELEEAR------ 511
Query: 537 RIEFDDDAVAIADVELAPESDAEKIISEHLLTFKDINGLVEQNVQLRSLVRNLSDQIESR 596
+ + +V A S + ++IS+HL+++++I L +QN +L +R L + E
Sbjct: 512 ----GNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETRERE 567
Query: 597 EMEFKDKLELELKKHTDEAASKVAAVLDRAEEQGRMIESLHTSVAMYKRLYEEEH----K 652
E E EL+ + A +++ + + Q ++++S+ MY+ L +
Sbjct: 568 EQETTSSKITELQLKLESALTELEQLRKSRQHQMQLVDSIVRQRDMYRILLSQTTGVAIP 627
Query: 653 LHSSHTQYIEAAPDGRKD----------LLLLLEGS------------QEATKRAQEKMA 690
LH+S + A ++ + ++E + QE + +++ A
Sbjct: 628 LHASSLDDVSLASTPKRPSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKA 687
Query: 691 ERVRCLEDDLGKARSEIIALRSERDKLALEAEFAREKLDSVMREAEHQKVEVNGVLARNV 750
E + + L K + ++ LRS+ K++ + +FA ++ + + E + E+ + RN
Sbjct: 688 ENEKIQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQ 747
Query: 751 EFSQLVVDYQRKLRETSESLNAAQELSRKLAM-EVSV--LKHEKEMLSNAEQRAYDEVRS 807
+ + ++ + ++ L A E KLA+ EV LK EKEML +E R + S
Sbjct: 748 KLTATTQKQEQIINTMTQDLRGANE---KLAVAEVRAENLKKEKEMLKLSEVRLSQQRES 804
Query: 808 L--SQRVYRLQASLDTIQNAEEVREEARAAERRKQEEYIKQVEREWAEAKKELQEERDNV 865
L QR L L +Q + + E + +++ I+++E E + KK+L+ E +
Sbjct: 805 LLAEQRGQNL--LLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQR 862
Query: 866 RLLTSDREQTLKNAVKQVE-EMGKELATALRAVASAETRAAVAETKLSDMEKRIRPLDAK 924
LT + + L + +Q++ E L T + +A+ A + LS+ME ++ ++
Sbjct: 863 HTLTRNLDVQLLDTKRQLDTETNLHLNTK-ELLKNAQKEIATLKQHLSNMEVQVA---SQ 918
Query: 925 GDEVDDGSRPSDE-------VQLQVGKEELEKLKEEAQANREHMLQYKSIAQVNEAALKE 977
+ +PS++ QL+ +E++ LKE + + ++ QY+++ E +L +
Sbjct: 919 SSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNK 978
Query: 978 METVHENFRTRVE-GVKKSLEDELHSLRKRVSELERENILKSEEIASAAGVREDALASAR 1036
+ V E R +E +K+S E + L K++ E+E+E ++ A E L+ +
Sbjct: 979 EKQVTEEVRKNIEVRLKESAEFQTQ-LEKKLMEVEKEKQELQDDKRRAIESMEQQLSELK 1037
Query: 1037 EEITSLKEERSIKISQIVNLEVQVSALKEDLEKEHERRQAAQANYERQVILQSETIQELT 1096
+ ++S++ E + + + D +++ + AQ YER+++L + +
Sbjct: 1038 KTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADV---- 1093
Query: 1097 KTSQALASLQEQASELRKLADAL-----KAENS--ELKSKWELEKSVLEKLKNEAEEKYD 1149
+AL + +EQ S++ + L KAE+ E K+ WE + +L+ ++ + +
Sbjct: 1094 ---EALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLKDEVSKCVCRCE 1150
Query: 1150 EVNEQNKILHSRLEALHIQLTEKDGSSVRISSQSTDSNPIGDAS-----LQSVISFLRNR 1204
++ +QN++LH ++E +L++K +SV+ Q + + + + ++ F+R
Sbjct: 1151 DLEKQNRLLHDQIE----KLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEILRFIRRE 1206
Query: 1205 KSIAETEVALLTTEKLRLQKQLESALKAAENAQASLTTERANSRAMLLTEEEIKSLKLQV 1264
K IAET + E LR ++++E + + Q SL ER + T + + L +
Sbjct: 1207 KEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKT 1266
Query: 1265 RELNLLRESNVQLREENKYNFEECQKLREVAQKTKSDCDNLENL---LRERQIEIEACKK 1321
+N++ E+N LREE + ++ Q+++ +K + D L+ L E+ ++A KK
Sbjct: 1267 ETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKK 1326
Query: 1322 EMEKQRMEKENLEKRVSELLQRCRNIDVEDYDRLKVE-------VRQMEEKLSGKNAEIE 1374
+E+ + + + R L+ + ++ D E+Y +L E ++Q+ E++ AEI
Sbjct: 1327 LLEE---DVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIA 1383
Query: 1375 ETRNLLSTKLDTISQLEQELANSRLE 1400
+ L+ + I L+++L R E
Sbjct: 1384 RSNASLTNNQNLIQSLKEDLNKVRTE 1409
>sp|O74424|NU211_SCHPO Nucleoporin nup211 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nup211 PE=1 SV=1
Length = 1837
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 326/1393 (23%), Positives = 611/1393 (43%), Gaps = 189/1393 (13%)
Query: 181 RLTQGKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSD-------VERQFS 233
+LTQ ++E +N WL+ EL + L+ L + + ++ +S++LSD ++R+ S
Sbjct: 194 KLTQKNSILENNNTWLSRELQGVNDKLLSLHQEASLEKSQLSSQLSDAVLEKDALQRKVS 253
Query: 234 ECSSSLNWNKERVRELEIKLSSLQEEFCSSKDAAAANEERFSTELSTVNKLVELYKESSE 293
S + R + + +LS +++++ S+ + F E+S+ ++ EL+ E E
Sbjct: 254 SLSQQFTESNLRYQNIVAELSEMRKQYEFSQVS-------FEKEISSQKQISELWMEKCE 306
Query: 294 EWSRKAGELEGVIKALETQLAQVQNDCKEKLEKEVSAREQLEKEAMDLKEKLEKCEAEI- 352
+ S + EL+ LE L Q+ +E+LE A L+ + L++++ E+++
Sbjct: 307 DCSLRLKELQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLK 366
Query: 353 ---ESSRKTNELNLLPLSSFSTETWMESFDTNNISEDNRLLVPKIPAGVSGTALAASLLR 409
E R +E+ + +S L+ G G + + L
Sbjct: 367 LANERLRHYDEIEISDMSELKYSN----------------LLNNSMKGFKGQSSVSDLYS 410
Query: 410 DGWSLAKIYAKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDA 469
+ + Y + + V+ L+ EA LQ L + + K A +R + A
Sbjct: 411 ERLYYKQKYEQTCQEVERLQR-SYNHVMEEANLQHPLVKEQFKRF------AHMQREIVA 463
Query: 470 YSAINQK-LQNFISEKSSLEKTIQELKADLRMRERDYYLAQKEISDLQKQVTVLLKE--- 525
S QK L++ KS E+ ++ L D + E +Y ++E DL +QV VLL E
Sbjct: 464 MSEQYQKSLEDCQKAKSRYEQ-LETLFKD-KCTENKHY--EQETKDLARQVQVLLHELDL 519
Query: 526 CRDIQLRCGLSRIEFDDDAVAIADVELAPESDAEKIISEHLLTFKDINGLVEQNVQLRSL 585
C + + G+ + + V + E E+D ++IIS L+ F++I L +QN L S
Sbjct: 520 CEN-GIVLGVDSRKKINSYVEKSLTE--DETDTDQIISSRLVVFRNIRELQQQNQNLLSA 576
Query: 586 VRNLSDQIESREMEFKDKLEL--ELKKHTDEAASKVAAVLDRAEEQGRMIESLHTSVAMY 643
V L+D++E E D E+ E +E ++ +L+ +Q R SL +
Sbjct: 577 VHELADRMEKDEKPDLDGAEIQEETLIKANETIDQLTKMLEEVSDQLRY--SLKER-DFF 633
Query: 644 KRLYEEEHKL---------HSSHTQYIEAAPDGRKDLLLL------LEGSQEATKRAQEK 688
+ L +E KL +T IE R L+ L LE + ++ ++K
Sbjct: 634 RSLVQENEKLLDMAPATPNSKLNTNLIEQTSYQR-SLIRLEQLTNELESLKSISRNKEKK 692
Query: 689 MAERVRCLEDDLGKARSEIIALRSERDKLALE-----------AEFAREKLDSVMREAEH 737
E + L+ + + ++ +L SER LALE +E ++++LD + +
Sbjct: 693 FEEAISSLQLEKSNIQLQLTSLTSERS-LALEKLNDLEKSLVLSERSKDELDESYKSLQE 751
Query: 738 Q----KVEVNGVLAR------NVEFSQLVVDYQRKLRETSESLNAAQELSRKLAMEVSVL 787
Q K+EV V ++ +E S +VD + SE+L + SV
Sbjct: 752 QLASKKIEVQNVSSQLSICNSQLEQSNHIVDNLK-----SENL-----------LLTSVK 795
Query: 788 KHEKEMLSNAEQRAYDEVRSLSQRVYRLQASLDTIQNAEEVREEARAAERRKQEEYIKQV 847
K LSN E + + SL Q + ++A +++ + +E + R I ++
Sbjct: 796 DKLKADLSNLESK----LSSLQQDNFHMKAQIES--SNQEYTATVDSMNSR-----ILEL 844
Query: 848 EREWAEAKKELQEERDNVRLLTSDREQTLK---NAVKQVEEMGKELATALRAVASAETRA 904
+ A +L E D+VR LT L+ V Q++ EL + + +
Sbjct: 845 SNDLRVANSKLSECSDDVRRLTLQNSFDLREHQTLVLQLQSNITELKQDITLQRTVRNQL 904
Query: 905 AVAETKLSD----MEKRIRPLDAKGDEVD-DGSRPSDEVQLQVGKEELEKLKEE---AQA 956
+ T+L + ME+R L +K + D ++ D V+++ ELE+ KE+ A+
Sbjct: 905 EIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVEVEAISIELERTKEKLRMAEL 964
Query: 957 NREHMLQYKSIAQVNEAALKEMETVHENFR--------TRVEGVKKSLEDELHSLRKRVS 1008
+ + +Q K +A +E L+ M HE F+ TR E + SL EL L KRV
Sbjct: 965 EKSN-IQQKYLA--SEKTLEMMNETHEQFKHLVESEISTREEKI-TSLRSELLDLNKRVE 1020
Query: 1009 ELERENILKSEEIASAAGVREDALASAREEITSLKEERSIKISQIVNLEVQVSALKEDLE 1068
L+ E S+E+A EDA+ ++ K+ I+ + + +++LKED+E
Sbjct: 1021 VLKEEKESSSKELAKQL---EDAVREKDSALSFKKDYEKIR----SDADRVITSLKEDIE 1073
Query: 1069 KEHERRQAAQANYERQVILQSETIQEL-----------TKTSQALASLQEQASELRKLAD 1117
KE + +NYE +++ T Q+L TK + A+ ++Q S L
Sbjct: 1074 KERSLMKECHSNYESEIVSHGRTTQKLRDLRTEFDEVNTKYLKLKANFEQQHSGL----- 1128
Query: 1118 ALKAENSELKSKWELEKSVLEKLKNEAEEKYDEVNEQNKILHSRLEALHIQLTEKDGSSV 1177
S + W +++ +E + ++ + QNK+LHS+ ++L Q+T +S
Sbjct: 1129 ------SGAEKDWNIQRKAMEDEISSLKDYILGLENQNKLLHSQFDSLSQQITVLQQNSS 1182
Query: 1178 RISSQSTDSNPIGDASLQSVISFLRNRKSIAETEVALLTTEKLRLQKQLESALKAAENAQ 1237
+ S + + D L+ ++S+LR+ K I + + L + L +Q++S ++ Q
Sbjct: 1183 ENLNISANLEAVQDNDLRELVSYLRHEKEIMDNKYELTILDNRGLNQQVKSLQSTVDSLQ 1242
Query: 1238 ASLTTERANSRAMLLTEEEIKSLKLQVRELNLLRESNVQLREENKYNFEECQKLREVAQK 1297
L ++ + T+ I S +E+ LL ESN LR++N + Q+L + +K
Sbjct: 1243 LELNRLQSLPVSNDQTDTPIIS---GSQEVQLLYESNSVLRKDNDAKLGKIQELEKEVEK 1299
Query: 1298 TKSDCDNLENLLRERQIEIEACKKEMEKQRMEKENLEKRVSELLQRCRNIDVEDYDRLKV 1357
+ + L+ + E + EI A + + + R +L + +D + LK
Sbjct: 1300 LNASLNPLQTEINELKAEIGAKTASLNLMKEYNSRWKLRFQSVLNKYERVDPTQLEELKK 1359
Query: 1358 EVRQMEEKLSGKNAEIEETRNLLSTKLDTISQLEQELANSRLELSE---KEKRLSDISQA 1414
+E++ +++ET T ++ L +E+ N + E+ + K RL+ A
Sbjct: 1360 NCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLA----A 1415
Query: 1415 EAARKLEMEKQKRISAQLRRKCEMLSKEKEESIK--ENQSLARQLDDLKQGK---KSTGD 1469
K E K+ ++ K E+ +K KE + K EN+++ ++++ LK + +
Sbjct: 1416 AWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESAS 1475
Query: 1470 VTGEQVMKEKEEK 1482
EQ+ KE+ E+
Sbjct: 1476 SDAEQITKEQFEQ 1488
>sp|Q02455|MLP1_YEAST Protein MLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MLP1 PE=1 SV=2
Length = 1875
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 141/653 (21%), Positives = 308/653 (47%), Gaps = 86/653 (13%)
Query: 766 TSESLNAAQELSRKLAM---EVSVLKHEKEMLSNAEQRAYDEVRSLSQRVYRLQASLDTI 822
T E+LN KL++ E+ LK E+++ + E+ E+ LS L+ + +
Sbjct: 728 THETLNEYVSCKSKLSIVETELLNLKEEQKLRVHLEKNLKQELNKLSPEKDSLRIMVTQL 787
Query: 823 QNAEEVREEARAAERRKQEEYIKQVEREWAEAKKELQEERDNVRLLTSDREQTLKNAVKQ 882
Q ++ RE+ R+ ++ I ++E +E KKE ++ +++ L D ++ +
Sbjct: 788 QTLQKEREDLLEETRKSCQKKIDELEDALSELKKETSQKDHHIKQLEEDNNSNIEWYQNK 847
Query: 883 VEEMGKELATALRAVASAETRAAVAETKLSDMEK-------RIRPLDAKGDEVDDGSRPS 935
+E + K+ + + +V S +T + K+ +EK R+ + + ++D S
Sbjct: 848 IEALKKDYESVITSVDSKQTDIEKLQYKVKSLEKEIEEDKIRLHTYNVMDETINDDS--- 904
Query: 936 DEVQLQVGKEELEKLKEEAQANREHMLQYKSIAQVNEAALKE----METVHENFRTRVEG 991
++ELEK K + +YK + + +L++ ++ ++F +++
Sbjct: 905 -------LRKELEKSKINLTDAYSQIKEYKDLYETTSQSLQQTNSKLDESFKDFTNQIKN 957
Query: 992 V---KKSLEDELHSLRKRVSELERENILKS---EEIASAAGVREDALASAREEITSLKEE 1045
+ K SLED++ L++++ L E L+ E+ + R L + +E+ ++K E
Sbjct: 958 LTDEKTSLEDKISLLKEQMFNLNNELDLQKKGMEKEKADFKKRISILQNNNKEVEAVKSE 1017
Query: 1046 RSIKISQIVNLEVQVSALKEDLEKEHERRQAAQANYERQVILQSETIQELTKTSQALASL 1105
K+S+I N DL+++ AQ NYE+++ ++ + +++ + L +
Sbjct: 1018 YESKLSKIQN----------DLDQQTIYANTAQNNYEQELQKHADVSKTISELREQLHTY 1067
Query: 1106 QEQASELRKLADALKAENSELKSKWELEK-SVLEKLKNEAEEKYDEVNEQNKILHSRLEA 1164
+ Q L D L+ E + W +K S+LE+L + + + ++++ QNK+L+ +++
Sbjct: 1068 KGQVKTLNLSRDQLENALKENEKSWSSQKESLLEQL-DLSNSRIEDLSSQNKLLYDQIQ- 1125
Query: 1165 LHIQLTEKDGSSVRISSQSTDSNPIGDASLQSVISFLRNRKSIAETEVAL------LTTE 1218
+ ++ +N L +++ LR + I +T+V + + +
Sbjct: 1126 ------------IYTAADKEVNNSTNGPGLNNILITLRRERDILDTKVTVAERDAKMLRQ 1173
Query: 1219 KLRLQK-QLESALKAAENAQASLTTERANSRAMLLTEEEIKSLKLQVRELNLLRESNVQL 1277
K+ L +L+ A +N++ E+ N +++ ++I ++ +LNLLRESN+ L
Sbjct: 1174 KISLMDVELQDARTKLDNSRV----EKENHSSIIQQHDDIME---KLNQLNLLRESNITL 1226
Query: 1278 REENKYNFE-------ECQKLREVAQKTKSDCDNLENLLRERQIEIEACKKEMEKQRMEK 1330
R E + N E KL++ +S+ L+ ++E++ E++ K+E+ + +
Sbjct: 1227 RNELENNNNKKKELQSELDKLKQNVAPIESELTALKYSMQEKEQELKLAKEEVHRWK--- 1283
Query: 1331 ENLEKRVSELLQRCRNIDVEDYDRLKVEVRQMEEKLSGK---NAEIEETRNLL 1380
KR ++L++ + DY++L+ E+ ++E+L K AE EE N L
Sbjct: 1284 ----KRSQDILEKHEQLSSSDYEKLESEIENLKEELENKERQGAEAEEKFNRL 1332
>sp|P12845|MYO2_CAEEL Myosin-2 OS=Caenorhabditis elegans GN=myo-2 PE=2 SV=2
Length = 1947
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 680 EATKRAQEKMAERVRCLEDDLGKARSEIIALRSERDKLALEAEFAREKLDSVMREAEHQK 739
E KR +K +E ++D L ++I+AL + R +L EA D+ EAEH
Sbjct: 1404 EVKKRQNQKTSE----IQDALDACNAKIVALENARSRLTAEA-------DANRLEAEHHA 1452
Query: 740 VEVNGVLARNVEFSQLVVDYQRKLRETSESLNAAQELSRKLAMEVSVLKHEKEMLSNAEQ 799
V+ + + F +++ ++++K+ + L+ AQ +R+L+ E L+ + + L++ +
Sbjct: 1453 QAVSSLEKKQKAFDKVIDEWKKKVDDLYLELDGAQRDARQLSGEAHKLRGQHDTLADQVE 1512
Query: 800 RAYDEVRSLSQRVYRLQASL 819
E +SLS L SL
Sbjct: 1513 GLRRENKSLSDETRDLTESL 1532
>sp|Q9UTK5|ALM1_SCHPO Abnormal long morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=alm1 PE=1 SV=1
Length = 1727
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 208/968 (21%), Positives = 416/968 (42%), Gaps = 119/968 (12%)
Query: 412 WSLAKIYA---KYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVD 468
+S K+Y+ K Q+ V +L+ QL R ++ +++++ ++ +R+E R
Sbjct: 384 FSFTKVYSDNMKLQQKVSSLKL-QLDRLTNK--FSSFCEQVKQRIPVVKQQRSEIVR--- 437
Query: 469 AYSAINQKLQNFISEKSSLEKT---IQELKADL---RMRERDYYL----AQKEISDLQKQ 518
N NF+SE SLE + + +++A+L +MR+ YL ++ + SDL ++
Sbjct: 438 -----NNIYMNFLSE--SLETSNNNLTKVQAELLSTKMRQEACYLQLTASRTQCSDLSRE 490
Query: 519 VTVLLKECRDIQLRCGLSRIEFDDDAVAIADVELAPESDAEKIISEHLLTFKDINGLVEQ 578
V L+ E L SR VA+ + P + +E ++++ L F I V +
Sbjct: 491 VICLMAELD--HLNETKSRNVPATVQVALDEYAQNPSTASETLVNKELANFSSIKEAVSK 548
Query: 579 NVQLRSLVRNLSDQIESREMEFKDKLELELKKHTDEAASKVAAVLDRAEEQGRMIESLHT 638
++LR VR L +E ++ + ++ +K++++ + ++ + ESL
Sbjct: 549 TLELREKVRALECDVEIQKQTVQYQISNAVKENSNTLSEQIKNLESELNSSKIKNESLLN 608
Query: 639 SVAMYKRLYEEEHKLHSSHTQYIEAAPDGRKDLLLLLEGSQEATKRAQEKMAERVR---- 694
+ K + SH D K + + + R EK E R
Sbjct: 609 ERNLLKEMLATSRSSILSHNSSAGNIDDKMKSI--------DESTRELEKNYEVYRNEMT 660
Query: 695 CLEDDLGKAR----SEIIALRSERDKLALEAEFAREKLDSVMREAEHQKVEVNGVLARNV 750
+++ L K SE+ A+R E + + + + ++L + + E K E + + N
Sbjct: 661 AIQESLSKRNQDLLSEMEAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEAKELRSINQ 720
Query: 751 EFSQLVVDYQRKLRETSESLNAAQELSRKLAMEVSVLKHEKEMLSNAEQRAYDEVRSL-- 808
++ ++ + +E L L+ +L E++ K EK++ ++R E L
Sbjct: 721 NLQDIISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRKRTQERLISENDKLLA 780
Query: 809 -SQRVYRLQASLDTIQNAEEVREEARAAERRKQEEYIKQVEREWAEAKKELQEERDNVRL 867
+R+ L + L T N +++ + AR + E E LQ+ +++
Sbjct: 781 ERERLMSLVSDLQTFLNQQQLSDAARKV----------KFESEKESLSLSLQKLKESNEK 830
Query: 868 LTSDREQTLKNAVKQVEEMGKELATALRAVA------SAETRAAV-----AETKLSDM-- 914
+++D L + K +E+ G E ++ ++ + S + R + E KL ++
Sbjct: 831 MSND----LHSLQKSLEKSGIEYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEIKLQELNG 886
Query: 915 -----EKRIRPLDAKGDEVDDGSRPSDEVQLQVGKEELEKLKEEAQANREHMLQYKSIAQ 969
++R L+AK + + S E L+ +L+ ++ + L ++I Q
Sbjct: 887 VIELEKQRFSTLEAKFTQQKNTSYSEREALLESSLSDLQSKHTSLESQYNYSL--RNIEQ 944
Query: 970 VNEAALKEMETVHENFRTRVEGVKKSLEDELHSLRKRVSELERENILKSEEIASAAGVRE 1029
+ +AA K E + E +T + + + L +++ LE+ ++ +EIAS++ E
Sbjct: 945 L-QAASKLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCE 1003
Query: 1030 DALASAREEITSLKEERSIKISQIVN-LEVQVSALKEDLEKEHERRQAAQANYERQVILQ 1088
+ + + L EE + N L +A K+ LEKE++ Y++Q++L
Sbjct: 1004 NITKDSETRVALLLEENK----HLNNELSSHRNAEKQHLEKEND--------YKQQLLLV 1051
Query: 1089 SETI--------QELTKTSQALASLQEQASELRKLADALKAENSELKSKWELEKSVLEKL 1140
+E + +EL + + A ++LQ+ + K + ++ N E+ L+ + E
Sbjct: 1052 TEDLRKTREDYEKELLRHADARSTLQKLREDYTKALEQVEDLNKEIA----LKAGINESQ 1107
Query: 1141 KNEAEEKYDEVNEQNKILHSRLEALHIQLTEKDGSSVRISSQSTDSNPI---GDASLQSV 1197
EK D + ++ +L + L QL + + I+S S D + + G + LQ+
Sbjct: 1108 PFPISEKEDPLRQEVYVLKKQNAMLLTQLQSSNLNFAEITSPSPDLDSVMKLGLSDLQNH 1167
Query: 1198 ISFLRNRKSIAETEVALLTTEKLRLQKQLESALKAAENAQASLTTERANSRAMLLTEEEI 1257
+ + I + LL E +L++ +ES+ + + Q +T + +S T E +
Sbjct: 1168 VKRISKEMEIISCQRQLLFLENKKLKRTVESSNRVIADLQRGITEKDVSS-----TSESV 1222
Query: 1258 KSLKLQVRELNLLRESNVQLREENKYNFEECQKLREVAQKTKSDCDNL----ENLLRERQ 1313
+ + LL ESN LRE + N E +LRE + K+D N E L + Q
Sbjct: 1223 GERSNYLNMVALLNESNKSLRENLERNEEVITELREKIETLKTDLANFRLNKEQLESQLQ 1282
Query: 1314 IEIEACKK 1321
E A KK
Sbjct: 1283 TEKAAVKK 1290
>sp|B0KWC9|CING_CALJA Cingulin OS=Callithrix jacchus GN=CGN PE=3 SV=2
Length = 1198
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 1295 AQKTKSDCDNLENLLRERQIEIEACKKEMEKQRMEKENLEKRVSELLQRCRNIDVEDYDR 1354
A+KT + L++ ++ + ++AC+ E + +++KE L +R+ L Q N DR
Sbjct: 896 AEKTSGGLNRLQDEIQRLRQALQACQAERDTAQLDKELLAQRLQGLEQEAENKKRSQDDR 955
Query: 1355 LKVEVRQMEEKLSGKNAEIEETRN---LLSTKL----DTISQLEQELANSR 1398
+ +++ +EEK+S AE++E +N LL+ ++ D + QL EL R
Sbjct: 956 AR-QLKGLEEKVSRLEAELDEEKNTVELLTDRVNRGRDQVDQLRTELMQER 1005
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.122 0.313
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 672,840,300
Number of Sequences: 539616
Number of extensions: 28957298
Number of successful extensions: 237755
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 6756
Number of HSP's that attempted gapping in prelim test: 139004
Number of HSP's gapped (non-prelim): 53926
length of query: 2058
length of database: 191,569,459
effective HSP length: 133
effective length of query: 1925
effective length of database: 119,800,531
effective search space: 230616022175
effective search space used: 230616022175
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 69 (31.2 bits)