BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045448
(1756 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3
Length = 2871
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 185/443 (41%), Gaps = 108/443 (24%)
Query: 451 LENLQASLQDEQSRFAQVEVTLQTLQKLHSQSQHEQKALTLEL----------QNKLQKM 500
L+ ++ L ++S A ++ LQ Q++HSQ+ + L+L ++ Q++
Sbjct: 811 LKKIKNDLNLKKSLLATMKTELQKAQQIHSQTSQQYPLYDLDLGKFGEKVTQLTDRWQRI 870
Query: 501 -KDMEVCNHDLEEGIEQV-----------------KRENQSLVELNSSSTITIQNLQNEI 542
K ++ DLE+ I+Q+ KR SL + + T+ NE
Sbjct: 871 DKQIDFRLWDLEKQIKQLRNYRDNYQAFCKWLYDAKRRQDSLESMKFGDSNTVMRFLNE- 929
Query: 543 FNLKEMKEKLEKEIALQEDKSNALQ----LEVRHLKEEIMGLSRRYQALVEQVLSVGLNP 598
++ L EI+ + DKS +Q L +K+ + L+ Y + +E +L++ +
Sbjct: 930 ------QKNLHSEISGKRDKSEEVQKIAELCANSIKDYELQLAS-YTSGLETLLNIPIKR 982
Query: 599 EHL----GSAVKELQEENSKLKEVCKEQGDEKEVLHEKLKNMDNLLKKNAALEGSLSEMN 654
+ G ++E + +++ E+ GD L E LK++++L KN +E E+
Sbjct: 983 TMIQSPSGVILQEAADVHARYIELLTRSGDYYRFLSEMLKSLEDLKLKNTKIEVLEEELR 1042
Query: 655 IKLEGSGERVNDLQKSCQFLREEKSSLVAEKATLLSQLQIMTENMQKLLEKNVTLEHSLA 714
+ + + E N KN L+ +L
Sbjct: 1043 LARDANSENCN---------------------------------------KNKFLDQNLQ 1063
Query: 715 GANVELEGLRAKSKSLEDFCRML----KNEKSNL---------LNERST-LVSQLEDVEK 760
E +AK SLE+ R K+ K NL LNE+ T L ++ED ++
Sbjct: 1064 KYQAECSQFKAKLASLEELKRQAELDGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKR 1123
Query: 761 RLGNLERRFTKLEEKYADIEREKESTLSQVEELRYSLTNEQLERANYVQSSESRMVDLES 820
R ++E RF + + Y +++ ++ + +L ++LE ++ E ++E
Sbjct: 1124 RRKSVEDRFDQQKNDYDQLQKARQCE-------KENLGWQKLESEKAIKEKE---YEIER 1173
Query: 821 LVHQLQEETTLRKKEFEEELDKA 843
L LQEE T RK+E+E EL K
Sbjct: 1174 LRVLLQEEGT-RKREYENELAKV 1195
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 202/449 (44%), Gaps = 81/449 (18%)
Query: 270 STLEKMIIQAQEDSKGLNERASKAEIEAQKLKQELSRLENEKEAGLLQYKQCLEMIYALE 329
+T+ ++ +Q +ED+ G + E + L +E+ RL+N Q E + +E
Sbjct: 1375 TTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKN-------TLTQTTENLRRVE 1427
Query: 330 SKISLAEENAGMLNEQTEKAETEVKALKQALTGLNEEKEAIAFRYDQCLDKIAQMESEIF 389
I + ++++ ++ E E++ + Q T EE + RY Q LD A+ +
Sbjct: 1428 EDIQQQKATGSEVSQRKQQLEVELRQVTQMRT---EE----SVRYKQSLDDAAKTIQDKN 1480
Query: 390 NAQEHAKQLNSEILMGAEKLRTSEQQCV-----LLERANHSLQ---VEAESLVQKIAIKD 441
E KQL + T++++C+ L+R + LQ A + K+ +++
Sbjct: 1481 KEIERLKQLIDK--------ETNDRKCLEDENARLQRVQYDLQKANSSATETINKLKVQE 1532
Query: 442 QELSQKQRELENL--QASLQDEQ-SRFAQVEVTLQTLQKLHSQSQHEQKALTLELQNKLQ 498
QEL++ + + E + + +++D+ +RF +L++L Q Q ++ L N+L+
Sbjct: 1533 QELTRLRIDYERVSQERTVKDQDITRFQ------NSLKELQLQKQKVEEEL-----NRLK 1581
Query: 499 KMKDMEVCNH-DLEEGIEQVKRENQSLVELNSSSTITIQNLQNEIFNLKEMKEKLEKEIA 557
+ + C LEE +E ++R SL E I I NL ++ +K++ E ++
Sbjct: 1582 RTASEDSCKRKKLEEELEGMRR---SLKE----QAIKITNLTQQLEQASIVKKRSEDDLR 1634
Query: 558 LQED-------KSNALQLEVRHLKEEIMGLSRRYQALVEQVLSVGLNPEHLGSAV----K 606
Q D + Q E+R L E+ L R+ E V L EH A+ +
Sbjct: 1635 QQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLLQEQESVKQAHLRNEHFQKAIEDKSR 1694
Query: 607 ELQE---ENSKLKEVCKEQGDEKEVLHEKLKNM----DNLLKKNAALE----GSLSEMNI 655
L E E +L+ + + E +L E+L+N+ D+L + + + ++ E+
Sbjct: 1695 SLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNATILELRS 1754
Query: 656 KLEGSGER-------VNDLQKSCQFLREE 677
+L+ S R +NDLQ+ + LR+E
Sbjct: 1755 QLQISNNRTLELQGLINDLQRERENLRQE 1783
>sp|Q8I659|YPF11_PLAF7 Uncharacterized protein PFB0765w OS=Plasmodium falciparum (isolate
3D7) GN=PFB0765w PE=4 SV=1
Length = 1383
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Query: 642 KNAALEGSLSEMNIKLEGSGERVNDLQKSCQFLREEKSSLVAEKATLLSQLQIMTENMQK 701
KN L +L++++ +L+ E+VN + ++ + +EK +++ E L + M + + K
Sbjct: 522 KNKELINNLNDISDELKNCIEQVNSVSRNMANVEKEKENIINELQILRMKNDTMRKRISK 581
Query: 702 LLEKNVTLEHSLAGANVEL----EGLRAKSKSLEDFCRMLKNEKSNLLNERSTLVSQLED 757
+E+ L+ L N ++ E L K L D KN L N ++ Q+E
Sbjct: 582 FVEQEKVLKFKLYTLNNDIFSKNEKLNDMQKKLNDVNEKYKNIVECLNNYKTEHKEQIEK 641
Query: 758 VEKRLGNLERRFTKLEEKYADIEREKESTLSQVEELRYSLT---------NEQLERANYV 808
+R+ L++ + L+++Y +E E + ++L + L+ NE+++R N
Sbjct: 642 KIERINTLKQNYYYLKKEYDLKNKELEKNIEHGKKLEHELSHCYEENQKLNEEIKRRNSF 701
Query: 809 QSSESRMVDLESLVHQLQEETTLRKKEF 836
++ R +DL + + E L+KKE
Sbjct: 702 IKNKDRKIDLLTNI----ENELLKKKEI 725
>sp|Q10411|SPO15_SCHPO Sporulation-specific protein 15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spo15 PE=1 SV=1
Length = 1957
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 752 VSQLEDVEKRLGNLERRFTKLEEKYADIEREKESTLSQVEELRYSLTNEQLERANYVQSS 811
V QL++ E+ +L+ F KL E + ++E ++ Q+++ L QLERAN+ Q
Sbjct: 594 VMQLKENEQNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQ-K 652
Query: 812 ESRMVDLESLVHQLQEETTLRKK--EFEEELDKAVKAQVEIFILQKFIKDLEE 862
ES + D E LR K + EE +K Q ++ L+K I+ L+E
Sbjct: 653 ESTLSD---------ENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQTLKE 696
>sp|E9Q557|DESP_MOUSE Desmoplakin OS=Mus musculus GN=Dsp PE=3 SV=1
Length = 2883
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 198/452 (43%), Gaps = 87/452 (19%)
Query: 270 STLEKMIIQAQEDSKGLNERASKAEIEAQKLKQELSRLENEKEAGLLQYKQCLEMIYALE 329
+T+ ++ +Q +ED+ G + E + L +E+ RL+N Q E + +E
Sbjct: 1387 TTIHQLTMQKEEDTSGYRAQIDNLTRENRSLCEEVKRLKN-------TLAQTTENLRRVE 1439
Query: 330 SKISLAEENAGMLNEQTEKAETEVKALKQALTGLNEEKEAIAFRYDQCLDKIAQMESEIF 389
+ ++++ ++ E E++ + Q T EE + RY Q LD A+ +
Sbjct: 1440 ENAQQQKATGSEMSQRKQQLEIELRQVTQMRT---EE----SMRYKQSLDDAAKTIQDKN 1492
Query: 390 NAQEHAKQLNSEILMGAEKLRTSEQQCV-----LLERANHSLQV---EAESLVQKIAIKD 441
E KQL + T+E++C+ L+R + LQ A + K+ +++
Sbjct: 1493 KEIERLKQLVDK--------ETNERKCLEDENSKLQRVQYDLQKANNSATEAMSKLKVQE 1544
Query: 442 QELSQ--------------KQRELENLQASLQDEQSRFAQVEVTLQTLQKLHSQSQHEQK 487
QEL++ K +++ +Q+SL+D Q + + E L L++ S ++K
Sbjct: 1545 QELTRLRIDYERVSQERTVKDQDITRIQSSLKDLQLQKQKAEEELSRLKRTASDESSKRK 1604
Query: 488 ALTLELQNKLQKMKDMEVCNHDLEEGIEQVKRENQSLVELNSSSTITIQNLQNEIFNLKE 547
L EL+ + +K+ V +L + +EQ S+V+ S +L++
Sbjct: 1605 MLEEELEAMRRSLKEQAVKITNLTQQLEQA-----SIVKKRSED------------DLRQ 1647
Query: 548 MKEKLEKEIALQEDKSNALQLEVRHLKEEIMGLSRRYQALVEQVLSVGLNPEHLGSAV-- 605
++ L+ + + Q E+R L ++ L R+ E V L EH A+
Sbjct: 1648 QRDVLDGHVR----EKQRTQEELRRLSLDVEALRRQLVQEQENVKQAHLRNEHFQKAIED 1703
Query: 606 --KELQE---ENSKLKEVCKEQGDEKEVLHEKLKNM----DNLLKKNAALE----GSLSE 652
+ L E E +L+ + + E +L E+L+N+ D+L + + + ++SE
Sbjct: 1704 KSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNSTISE 1763
Query: 653 MNIKLEGSGER-------VNDLQKSCQFLREE 677
+ +L+ S R +NDLQ+ + LR+E
Sbjct: 1764 LRSQLQISNNRTLELQGLINDLQRERENLRQE 1795
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.127 0.329
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 583,084,490
Number of Sequences: 539616
Number of extensions: 24992421
Number of successful extensions: 174094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 4213
Number of HSP's that attempted gapping in prelim test: 113439
Number of HSP's gapped (non-prelim): 29356
length of query: 1756
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1624
effective length of database: 120,340,147
effective search space: 195432398728
effective search space used: 195432398728
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)