Query 045449
Match_columns 823
No_of_seqs 774 out of 5802
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:44:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045449.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045449hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.5E-77 8.4E-82 722.6 32.6 538 6-558 9-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 3.3E-63 1.1E-67 599.3 29.3 456 53-518 179-723 (768)
3 4eco_A Uncharacterized protein 100.0 4.2E-61 1.4E-65 567.9 16.9 474 8-512 29-600 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 2.1E-58 7.1E-63 553.7 24.5 457 6-513 266-841 (876)
5 3t6q_A CD180 antigen; protein- 100.0 3.4E-56 1.2E-60 525.2 30.6 482 42-547 14-563 (606)
6 3j0a_A TOLL-like receptor 5; m 100.0 4.1E-55 1.4E-59 534.0 30.6 477 40-548 14-564 (844)
7 1ziw_A TOLL-like receptor 3; i 100.0 4.6E-54 1.6E-58 514.1 31.8 480 52-548 25-626 (680)
8 3vq2_A TLR4, TOLL-like recepto 100.0 5E-54 1.7E-58 506.8 31.5 465 52-549 32-563 (606)
9 3t6q_A CD180 antigen; protein- 100.0 8.9E-54 3E-58 504.6 30.9 450 52-516 57-564 (606)
10 3vq2_A TLR4, TOLL-like recepto 100.0 2.1E-51 7.2E-56 484.4 30.4 442 52-517 56-563 (606)
11 2z81_A CD282 antigen, TOLL-lik 100.0 2.7E-51 9.1E-56 477.6 27.9 481 39-548 3-514 (549)
12 2z63_A TOLL-like receptor 4, v 100.0 7.2E-51 2.5E-55 476.2 29.7 467 52-549 28-536 (570)
13 1ziw_A TOLL-like receptor 3; i 100.0 3.1E-50 1.1E-54 480.9 35.1 446 56-513 8-518 (680)
14 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-50 4.8E-55 494.0 29.7 442 52-517 48-565 (844)
15 4eco_A Uncharacterized protein 100.0 1.3E-51 4.5E-56 486.7 15.3 444 76-547 81-603 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 2.2E-49 7.6E-54 463.6 30.2 455 57-546 12-509 (570)
17 2z7x_B TOLL-like receptor 1, v 100.0 2.4E-49 8.1E-54 458.0 24.3 454 55-546 3-483 (520)
18 4ecn_A Leucine-rich repeat pro 100.0 5.4E-49 1.9E-53 472.1 19.8 428 76-545 323-841 (876)
19 2z7x_B TOLL-like receptor 1, v 100.0 2.3E-48 7.8E-53 449.8 21.7 436 52-516 21-485 (520)
20 2z81_A CD282 antigen, TOLL-lik 100.0 2E-46 7E-51 436.4 27.1 464 46-545 3-487 (549)
21 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-45 1.1E-49 433.7 31.6 465 52-546 52-582 (635)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.3E-46 1.8E-50 433.8 23.9 460 55-548 34-514 (562)
23 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-45 4.5E-50 397.1 16.6 296 5-315 2-306 (313)
24 3v47_A TOLL-like receptor 5B a 100.0 1.7E-44 5.8E-49 410.0 23.0 393 38-517 6-413 (455)
25 3v47_A TOLL-like receptor 5B a 100.0 1.3E-43 4.5E-48 402.7 26.4 393 79-549 13-413 (455)
26 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.5E-44 1.9E-48 416.8 18.4 438 52-517 52-515 (562)
27 1jl5_A Outer protein YOPM; leu 100.0 6.6E-43 2.2E-47 394.8 20.4 377 52-519 11-418 (454)
28 1jl5_A Outer protein YOPM; leu 100.0 6.8E-43 2.3E-47 394.7 20.1 385 53-519 35-436 (454)
29 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-41 5.4E-46 402.0 29.4 443 53-516 77-584 (635)
30 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-41 3.6E-46 385.3 19.6 353 53-520 43-395 (457)
31 1o6v_A Internalin A; bacterial 100.0 4.5E-39 1.5E-43 366.3 29.5 343 53-489 47-389 (466)
32 3bz5_A Internalin-J, INLJ; leu 100.0 9.6E-40 3.3E-44 369.3 21.7 333 52-497 64-396 (457)
33 1o6v_A Internalin A; bacterial 100.0 1.5E-38 5.2E-43 361.9 31.3 322 52-465 68-389 (466)
34 3oja_B Anopheles plasmodium-re 100.0 3.8E-38 1.3E-42 369.6 24.0 174 356-549 212-385 (597)
35 2id5_A Lingo-1, leucine rich r 100.0 5.1E-38 1.8E-42 358.9 23.1 329 205-549 33-361 (477)
36 3o6n_A APL1; leucine-rich repe 100.0 2.1E-37 7.1E-42 344.3 24.0 173 356-548 206-378 (390)
37 2id5_A Lingo-1, leucine rich r 100.0 3.7E-37 1.3E-41 351.8 26.6 316 60-417 19-334 (477)
38 4fcg_A Uncharacterized protein 100.0 4.8E-37 1.7E-41 332.3 13.9 279 4-314 22-314 (328)
39 1ogq_A PGIP-2, polygalacturona 100.0 1E-35 3.5E-40 319.9 18.3 257 253-550 50-310 (313)
40 4fmz_A Internalin; leucine ric 100.0 9E-34 3.1E-38 309.7 25.8 306 152-512 41-346 (347)
41 4fmz_A Internalin; leucine ric 100.0 1.5E-33 5.1E-38 308.0 27.4 307 72-488 40-346 (347)
42 3o6n_A APL1; leucine-rich repe 100.0 1.1E-33 3.6E-38 314.4 22.7 311 203-546 44-354 (390)
43 3oja_B Anopheles plasmodium-re 100.0 8.6E-34 3E-38 332.6 22.7 311 204-547 51-361 (597)
44 2ft3_A Biglycan; proteoglycan, 100.0 8.3E-33 2.8E-37 300.1 22.8 289 204-510 33-331 (332)
45 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-36 4.4E-41 345.7 -8.0 290 221-512 106-440 (461)
46 2ft3_A Biglycan; proteoglycan, 100.0 1.9E-32 6.4E-37 297.3 24.0 214 55-311 36-251 (332)
47 1z7x_W Ribonuclease inhibitor; 100.0 1.1E-36 3.8E-41 346.2 -10.1 398 52-493 3-445 (461)
48 1xku_A Decorin; proteoglycan, 100.0 4.7E-32 1.6E-36 294.0 24.7 291 203-510 30-330 (330)
49 1xku_A Decorin; proteoglycan, 100.0 7.9E-32 2.7E-36 292.1 24.6 244 56-347 35-280 (330)
50 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.4E-34 2.9E-38 299.5 2.0 151 628-778 32-237 (311)
51 3ogk_B Coronatine-insensitive 100.0 2.5E-34 8.7E-39 337.5 -4.6 438 38-514 40-528 (592)
52 3omv_A RAF proto-oncogene seri 100.0 5.4E-33 1.8E-37 294.1 4.0 151 628-778 36-240 (307)
53 4fih_A Serine/threonine-protei 100.0 2.1E-33 7.3E-38 300.9 0.4 149 628-778 74-273 (346)
54 4asz_A BDNF/NT-3 growth factor 100.0 3.1E-33 1.1E-37 296.0 -0.1 151 629-779 14-235 (299)
55 2z80_A TOLL-like receptor 2, v 100.0 8.7E-31 3E-35 286.8 18.8 278 228-516 31-318 (353)
56 4b9d_A Serine/threonine-protei 100.0 4.3E-33 1.5E-37 299.1 0.1 149 628-778 24-228 (350)
57 4aoj_A High affinity nerve gro 100.0 8.3E-33 2.8E-37 296.8 2.0 151 629-779 42-265 (329)
58 3hyh_A Carbon catabolite-derep 100.0 1.8E-32 6.3E-37 285.3 2.3 148 628-778 13-215 (275)
59 4fie_A Serine/threonine-protei 100.0 1.5E-32 5.1E-37 301.7 1.0 149 628-778 151-350 (423)
60 3fpq_A Serine/threonine-protei 100.0 7.8E-32 2.7E-36 283.1 6.4 143 631-778 29-232 (290)
61 2z66_A Variable lymphocyte rec 100.0 2.1E-30 7.3E-35 277.7 17.0 281 207-497 10-296 (306)
62 4fcg_A Uncharacterized protein 100.0 8.5E-30 2.9E-34 275.4 21.2 234 253-512 81-314 (328)
63 4g3f_A NF-kappa-beta-inducing 100.0 2.2E-32 7.4E-37 292.3 0.7 147 627-778 57-259 (336)
64 4gt4_A Tyrosine-protein kinase 100.0 2.2E-32 7.5E-37 290.7 0.1 178 642-820 57-292 (308)
65 2z66_A Variable lymphocyte rec 100.0 1.5E-30 5.1E-35 278.9 13.6 250 231-514 10-263 (306)
66 2z80_A TOLL-like receptor 2, v 100.0 2.4E-30 8.1E-35 283.3 15.4 280 204-492 31-318 (353)
67 3g06_A SSPH2 (leucine-rich rep 100.0 1.3E-29 4.4E-34 294.8 19.9 122 24-168 7-134 (622)
68 4g31_A Eukaryotic translation 100.0 7.8E-32 2.7E-36 285.7 -0.6 147 628-777 5-229 (299)
69 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-29 4.7E-34 268.5 16.2 254 231-519 14-268 (285)
70 4ase_A Vascular endothelial gr 100.0 1.8E-31 6.2E-36 288.7 1.3 154 626-779 62-292 (353)
71 3oja_A Leucine-rich immune mol 100.0 2.3E-30 7.9E-35 295.1 10.3 235 252-506 33-269 (487)
72 3ubd_A Ribosomal protein S6 ki 100.0 1.7E-32 5.8E-37 289.6 -6.8 149 628-778 24-229 (304)
73 1wwl_A Monocyte differentiatio 100.0 1.4E-30 4.7E-35 279.9 7.1 250 224-513 39-310 (312)
74 3zyi_A Leucine-rich repeat-con 100.0 1.3E-28 4.4E-33 278.8 23.0 249 229-489 55-304 (452)
75 1wwl_A Monocyte differentiatio 100.0 1.7E-30 5.8E-35 279.2 6.8 255 200-489 39-310 (312)
76 3ogk_B Coronatine-insensitive 100.0 6.6E-32 2.3E-36 317.0 -4.6 407 91-543 64-525 (592)
77 3zyj_A Leucine-rich repeat-con 100.0 1.6E-28 5.3E-33 277.1 22.3 248 229-488 44-292 (440)
78 1ozn_A Reticulon 4 receptor; N 100.0 4.9E-29 1.7E-33 264.3 16.4 229 256-517 14-243 (285)
79 3o53_A Protein LRIM1, AGAP0063 100.0 1.3E-30 4.6E-35 280.6 4.0 267 230-517 12-281 (317)
80 3zyi_A Leucine-rich repeat-con 100.0 2.2E-28 7.6E-33 276.9 22.0 252 254-516 55-307 (452)
81 3zyj_A Leucine-rich repeat-con 100.0 4.2E-28 1.4E-32 273.6 22.4 251 254-515 44-295 (440)
82 3o53_A Protein LRIM1, AGAP0063 100.0 9E-30 3.1E-34 274.2 8.0 267 208-495 14-283 (317)
83 4b99_A Mitogen-activated prote 100.0 1.5E-29 5.1E-34 278.5 5.4 151 628-778 54-266 (398)
84 3g06_A SSPH2 (leucine-rich rep 100.0 3E-27 1E-31 274.9 23.4 265 205-520 41-305 (622)
85 2p1m_B Transport inhibitor res 100.0 9.7E-31 3.3E-35 307.1 -6.5 431 38-512 33-519 (594)
86 3oja_A Leucine-rich immune mol 99.9 3E-28 1E-32 277.6 12.2 234 229-483 35-270 (487)
87 3hmm_A TGF-beta receptor type- 99.9 3.2E-29 1.1E-33 267.0 3.8 149 628-777 3-220 (303)
88 3v5w_A G-protein coupled recep 99.9 2E-28 6.8E-33 280.8 6.5 146 628-777 189-393 (689)
89 4f9c_A Cell division cycle 7-r 99.9 1.1E-28 3.7E-33 268.8 3.4 151 625-777 18-249 (361)
90 2o6q_A Variable lymphocyte rec 99.9 1.4E-26 4.7E-31 243.3 18.6 219 37-316 2-220 (270)
91 2p1m_B Transport inhibitor res 99.9 2.3E-29 7.9E-34 295.4 -7.5 423 52-510 66-542 (594)
92 3uto_A Twitchin; kinase, muscl 99.9 4.8E-28 1.6E-32 279.8 3.1 149 627-778 156-359 (573)
93 2z62_A TOLL-like receptor 4, v 99.9 1E-25 3.6E-30 237.4 17.3 229 232-516 11-241 (276)
94 2z62_A TOLL-like receptor 4, v 99.9 1.8E-25 6.3E-30 235.5 17.9 209 331-549 29-242 (276)
95 3rfs_A Internalin B, repeat mo 99.9 1.6E-25 5.4E-30 235.4 14.7 228 203-474 18-245 (272)
96 3rfs_A Internalin B, repeat mo 99.9 7.5E-26 2.6E-30 237.9 12.2 158 356-520 86-243 (272)
97 3goz_A Leucine-rich repeat-con 99.9 3.5E-26 1.2E-30 250.9 4.2 183 209-392 3-209 (362)
98 4aw2_A Serine/threonine-protei 99.9 5.6E-27 1.9E-31 262.2 -2.6 159 619-778 65-284 (437)
99 2o6q_A Variable lymphocyte rec 99.9 7.6E-24 2.6E-28 222.3 20.9 184 332-516 39-222 (270)
100 2c30_A Serine/threonine-protei 99.9 7.1E-26 2.4E-30 244.1 3.1 162 615-778 22-244 (321)
101 2ca6_A RAN GTPase-activating p 99.9 8E-26 2.7E-30 250.4 3.4 249 243-515 23-319 (386)
102 2ast_B S-phase kinase-associat 99.9 7.4E-26 2.5E-30 245.7 2.4 212 37-287 34-257 (336)
103 1o6l_A RAC-beta serine/threoni 99.9 1.1E-25 3.7E-30 243.9 3.6 149 628-778 5-208 (337)
104 1p9a_G Platelet glycoprotein I 99.9 9.3E-24 3.2E-28 223.8 18.1 204 224-465 6-209 (290)
105 3fe3_A MAP/microtubule affinit 99.9 1E-25 3.6E-30 243.2 3.0 149 627-778 14-217 (328)
106 3goz_A Leucine-rich repeat-con 99.9 1.5E-25 5E-30 246.0 4.0 231 232-464 2-266 (362)
107 1p9a_G Platelet glycoprotein I 99.9 1.2E-23 4E-28 223.0 18.4 178 332-514 33-210 (290)
108 3fxz_A Serine/threonine-protei 99.9 1E-25 3.5E-30 240.1 2.5 150 627-778 19-219 (297)
109 3h4j_B AMPK kdaid, SNF1-like p 99.9 3.7E-25 1.3E-29 239.4 6.6 148 628-778 9-211 (336)
110 3p86_A Serine/threonine-protei 99.9 1.4E-25 4.9E-30 240.3 3.2 151 627-779 36-243 (309)
111 3s95_A LIMK-1, LIM domain kina 99.9 2.5E-25 8.5E-30 238.7 5.0 152 627-778 9-225 (310)
112 2ca6_A RAN GTPase-activating p 99.9 1.6E-25 5.3E-30 248.1 3.3 249 219-492 23-320 (386)
113 3v8s_A RHO-associated protein 99.9 1.3E-25 4.5E-30 249.2 2.6 158 620-778 61-276 (410)
114 2qkw_B Protein kinase; three-h 99.9 7.7E-26 2.6E-30 244.0 0.1 162 617-778 28-244 (321)
115 2vd5_A DMPK protein; serine/th 99.9 2.2E-25 7.7E-30 247.5 3.5 160 618-778 51-273 (412)
116 3ttj_A Mitogen-activated prote 99.9 3.9E-25 1.3E-29 250.1 4.9 149 627-778 61-266 (464)
117 4fr4_A YANK1, serine/threonine 99.9 3.4E-25 1.2E-29 243.6 4.2 147 628-777 15-219 (384)
118 3uim_A Brassinosteroid insensi 99.9 1.5E-25 5.1E-30 242.3 1.0 163 613-776 15-236 (326)
119 3txo_A PKC-L, NPKC-ETA, protei 99.9 2.5E-25 8.5E-30 242.6 2.1 150 627-778 22-227 (353)
120 3rp9_A Mitogen-activated prote 99.9 6E-25 2E-29 249.2 5.3 144 627-770 52-279 (458)
121 3m19_A Variable lymphocyte rec 99.9 6.2E-24 2.1E-28 220.4 12.5 193 37-268 2-194 (251)
122 4glp_A Monocyte differentiatio 99.9 6.6E-24 2.3E-28 227.6 13.0 205 277-513 91-308 (310)
123 1fot_A TPK1 delta, CAMP-depend 99.9 1.5E-24 5E-29 233.2 7.3 146 628-778 6-206 (318)
124 2zv2_A Calcium/calmodulin-depe 99.9 4.9E-25 1.7E-29 235.0 3.5 149 628-778 13-243 (298)
125 3zgw_A Maternal embryonic leuc 99.9 1.5E-25 5.1E-30 243.5 -0.5 152 626-778 8-213 (347)
126 2psq_A Fibroblast growth facto 99.9 6.6E-25 2.3E-29 241.3 4.7 152 628-779 81-310 (370)
127 2nru_A Interleukin-1 receptor- 99.9 1.3E-24 4.4E-29 232.7 6.7 165 614-779 11-238 (307)
128 4glp_A Monocyte differentiatio 99.9 6.7E-24 2.3E-28 227.5 12.2 201 329-544 90-307 (310)
129 4eqm_A Protein kinase; transfe 99.9 3.8E-25 1.3E-29 235.4 2.4 151 628-779 11-216 (294)
130 4dc2_A Protein kinase C IOTA t 99.9 5.2E-25 1.8E-29 243.0 3.3 149 627-777 51-255 (396)
131 3lb7_A RAF proto-oncogene seri 99.9 7.2E-25 2.5E-29 234.7 4.1 152 628-779 36-241 (307)
132 3tki_A Serine/threonine-protei 99.9 3.2E-25 1.1E-29 239.2 1.1 152 627-778 6-211 (323)
133 3poz_A Epidermal growth factor 99.9 2.7E-25 9.2E-30 240.4 0.3 152 628-779 15-224 (327)
134 3a8x_A Protein kinase C IOTA t 99.9 1.4E-24 4.7E-29 236.2 5.7 148 628-777 9-212 (345)
135 3oz6_A Mitogen-activated prote 99.9 1.2E-24 4E-29 241.3 5.1 153 626-778 7-234 (388)
136 1xjd_A Protein kinase C, theta 99.9 8.6E-25 2.9E-29 237.5 3.9 152 625-778 14-221 (345)
137 2ast_B S-phase kinase-associat 99.9 1.6E-24 5.3E-29 235.2 5.9 253 229-520 48-314 (336)
138 3soa_A Calcium/calmodulin-depe 99.9 1E-24 3.4E-29 244.9 4.3 151 626-778 9-216 (444)
139 1rdq_E PKA C-alpha, CAMP-depen 99.9 6.7E-25 2.3E-29 239.0 2.8 146 628-778 41-241 (350)
140 2bdw_A Hypothetical protein K1 99.9 8.7E-25 3E-29 239.5 3.5 150 626-778 27-233 (362)
141 3e7e_A HBUB1, BUB1A, mitotic c 99.9 9.7E-25 3.3E-29 239.8 3.6 149 626-777 63-287 (365)
142 3c0i_A Peripheral plasma membr 99.9 9.7E-25 3.3E-29 238.3 3.5 151 627-779 23-237 (351)
143 3dbq_A Dual specificity protei 99.9 5.7E-25 2E-29 239.4 1.3 152 628-780 9-225 (343)
144 3soc_A Activin receptor type-2 99.9 1.6E-24 5.6E-29 233.6 4.8 151 627-778 23-241 (322)
145 2i0e_A Protein kinase C-beta I 99.9 7.1E-25 2.4E-29 238.9 2.0 150 627-778 19-224 (353)
146 3o0g_A Cell division protein k 99.9 2.3E-24 7.8E-29 229.1 5.8 147 628-776 2-203 (292)
147 3c4z_A Rhodopsin kinase; Ser/T 99.9 1.4E-24 4.9E-29 248.0 4.5 149 628-778 185-392 (543)
148 3niz_A Rhodanese family protei 99.9 2.4E-24 8.1E-29 231.1 5.8 150 627-778 20-223 (311)
149 3llt_A Serine/threonine kinase 99.9 7.9E-25 2.7E-29 240.0 2.1 161 612-778 19-262 (360)
150 3m19_A Variable lymphocyte rec 99.9 1.2E-22 4E-27 210.7 18.3 182 331-516 15-196 (251)
151 3kul_A Ephrin type-A receptor 99.9 1.2E-24 4E-29 235.0 3.0 152 628-779 49-259 (325)
152 2xwt_C Thyrotropin receptor; s 99.9 4.2E-23 1.4E-27 212.5 14.4 86 253-343 31-118 (239)
153 2xwt_C Thyrotropin receptor; s 99.9 4.9E-23 1.7E-27 212.0 14.9 87 229-316 32-120 (239)
154 1u5q_A Serine/threonine protei 99.9 1.2E-24 4.1E-29 237.0 2.8 145 628-778 54-256 (348)
155 3cbl_A C-FES, proto-oncogene t 99.9 5.7E-25 1.9E-29 242.6 -0.2 153 627-779 113-320 (377)
156 2zmd_A Dual specificity protei 99.9 1.2E-24 4.2E-29 240.8 2.4 151 628-779 56-271 (390)
157 2yab_A Death-associated protei 99.9 1.7E-24 5.6E-29 236.7 3.3 149 627-778 11-221 (361)
158 2acx_A G protein-coupled recep 99.9 2E-24 7E-29 247.3 4.0 149 627-778 183-388 (576)
159 3ork_A Serine/threonine protei 99.9 6.2E-25 2.1E-29 235.7 -0.5 153 627-779 11-223 (311)
160 3n9x_A Phosphotransferase; mal 99.9 3.9E-24 1.3E-28 240.3 5.5 150 627-776 25-253 (432)
161 1kob_A Twitchin; kinase, intra 99.9 2.8E-24 9.7E-29 237.0 4.4 149 627-778 50-253 (387)
162 1tki_A Titin; serine kinase, m 99.9 2.2E-24 7.5E-29 232.4 3.2 148 627-778 4-206 (321)
163 2r5t_A Serine/threonine-protei 99.9 1.1E-24 3.9E-29 239.0 1.0 150 627-778 37-242 (373)
164 2x4f_A Myosin light chain kina 99.9 2.7E-24 9.4E-29 236.4 3.8 144 633-779 94-292 (373)
165 3vhe_A Vascular endothelial gr 99.9 1.2E-24 4.2E-29 238.4 0.7 163 617-779 11-300 (359)
166 3a62_A Ribosomal protein S6 ki 99.9 2.7E-24 9.1E-29 232.4 3.4 149 628-778 17-224 (327)
167 2y94_A 5'-AMP-activated protei 99.9 5.4E-24 1.8E-28 240.5 6.0 148 628-778 16-219 (476)
168 3gni_B Strad alpha; kinase fol 99.9 4.5E-24 1.5E-28 236.6 5.1 152 627-778 24-240 (389)
169 3l9p_A Anaplastic lymphoma kin 99.9 1E-24 3.5E-29 239.6 -0.3 152 628-779 71-291 (367)
170 3og7_A AKAP9-BRAF fusion prote 99.9 2.3E-24 8E-29 228.6 2.4 152 627-778 23-228 (289)
171 4ejn_A RAC-alpha serine/threon 99.9 1.1E-24 3.7E-29 246.0 -0.3 150 627-778 147-352 (446)
172 3qup_A Tyrosine-protein kinase 99.9 2.3E-24 7.8E-29 232.6 2.2 154 626-779 21-244 (323)
173 2y0a_A Death-associated protei 99.9 2E-24 6.8E-29 233.3 1.6 149 627-778 10-220 (326)
174 2izr_A Casein kinase I isoform 99.9 6.4E-25 2.2E-29 237.7 -2.6 149 628-778 9-220 (330)
175 1h6u_A Internalin H; cell adhe 99.9 1.8E-22 6.2E-27 215.9 16.5 212 204-440 19-230 (308)
176 2i1m_A Macrophage colony-stimu 99.9 1.6E-24 5.4E-29 234.9 0.4 152 627-778 45-270 (333)
177 3ugc_A Tyrosine-protein kinase 99.9 1.6E-24 5.5E-29 230.6 0.2 151 628-778 10-220 (295)
178 3kex_A Receptor tyrosine-prote 99.9 1.4E-24 4.8E-29 234.5 -0.6 152 628-779 13-222 (325)
179 3byv_A Rhoptry kinase; malaria 99.9 4.4E-24 1.5E-28 235.6 3.1 146 627-778 72-316 (377)
180 1cm8_A Phosphorylated MAP kina 99.9 7.5E-24 2.6E-28 232.6 4.9 147 627-778 24-229 (367)
181 2pmi_A Negative RE, cyclin-dep 99.9 4.1E-24 1.4E-28 230.0 2.7 150 627-778 4-212 (317)
182 3g33_A Cell division protein k 99.9 5.4E-24 1.8E-28 228.0 3.5 150 626-778 7-222 (308)
183 3lzb_A Epidermal growth factor 99.9 1.5E-24 5E-29 234.5 -1.1 152 628-779 15-224 (327)
184 3qyz_A Mitogen-activated prote 99.9 3.8E-24 1.3E-28 234.9 2.0 158 621-778 20-235 (364)
185 2ivs_A Proto-oncogene tyrosine 99.9 6.1E-24 2.1E-28 228.1 3.2 153 627-779 22-257 (314)
186 3q4u_A Activin receptor type-1 99.9 8E-24 2.7E-28 225.7 4.0 142 627-771 7-219 (301)
187 3p1a_A MYT1 kinase, membrane-a 99.9 9.1E-25 3.1E-29 234.4 -3.3 146 628-777 57-257 (311)
188 1mp8_A Focal adhesion kinase 1 99.9 4.4E-24 1.5E-28 225.6 1.8 152 627-779 14-222 (281)
189 3pfq_A PKC-B, PKC-beta, protei 99.9 7.9E-24 2.7E-28 249.9 4.1 150 627-778 340-545 (674)
190 2xrw_A Mitogen-activated prote 99.9 8.8E-24 3E-28 232.6 4.3 149 627-778 24-229 (371)
191 3dtc_A Mitogen-activated prote 99.9 4E-24 1.4E-28 224.4 1.5 148 628-779 7-218 (271)
192 2eue_A Carbon catabolite derep 99.9 4.3E-24 1.5E-28 224.8 1.7 149 628-779 13-216 (275)
193 1rjb_A FL cytokine receptor; k 99.9 4.2E-24 1.4E-28 232.7 1.6 153 627-779 44-279 (344)
194 1ob3_A PFPK5, cell division co 99.9 2.5E-24 8.7E-29 228.3 -0.2 149 628-778 2-204 (288)
195 3kk8_A Calcium/calmodulin depe 99.9 1.2E-23 4.1E-28 222.4 5.0 149 627-778 5-210 (284)
196 2w4o_A Calcium/calmodulin-depe 99.9 4E-24 1.4E-28 233.1 1.3 148 626-778 51-253 (349)
197 3dls_A PAS domain-containing s 99.9 2.2E-24 7.5E-29 233.8 -0.8 151 626-779 22-234 (335)
198 2qol_A Ephrin receptor; recept 99.9 3.9E-24 1.3E-28 235.4 1.1 151 628-778 45-254 (373)
199 1qcf_A Haematopoetic cell kina 99.9 2.7E-24 9.2E-29 243.2 -0.2 150 627-778 187-389 (454)
200 3q60_A ROP5B; pseudokinase, tr 99.9 2E-23 6.8E-28 229.8 6.7 146 628-778 62-296 (371)
201 1h6u_A Internalin H; cell adhe 99.9 3.8E-22 1.3E-26 213.4 16.4 208 258-489 24-231 (308)
202 1k9a_A Carboxyl-terminal SRC k 99.9 7.5E-24 2.6E-28 239.1 3.2 146 627-779 192-391 (450)
203 3tt0_A Basic fibroblast growth 99.9 7.2E-24 2.5E-28 234.3 2.9 152 627-778 68-297 (382)
204 2fst_X Mitogen-activated prote 99.9 8.6E-24 2.9E-28 232.0 3.5 147 627-778 28-233 (367)
205 4f0f_A Serine/threonine-protei 99.9 5.6E-24 1.9E-28 225.4 1.9 147 628-779 19-232 (287)
206 4euu_A Serine/threonine-protei 99.9 9.8E-24 3.3E-28 227.2 3.7 147 628-777 9-225 (319)
207 3qd2_B Eukaryotic translation 99.9 8.6E-24 3E-28 228.7 3.2 151 627-777 5-278 (332)
208 1j1b_A Glycogen synthase kinas 99.9 6.8E-24 2.3E-28 237.3 2.3 144 628-778 54-260 (420)
209 3pls_A Macrophage-stimulating 99.9 9.6E-24 3.3E-28 224.8 3.2 147 630-776 23-229 (298)
210 1t46_A HOMO sapiens V-KIT hard 99.9 5.5E-24 1.9E-28 228.4 1.3 152 628-779 23-252 (313)
211 2xir_A Vascular endothelial gr 99.9 4.3E-24 1.5E-28 229.6 0.4 161 618-778 17-254 (316)
212 3sxs_A Cytoplasmic tyrosine-pr 99.9 7.1E-24 2.4E-28 222.2 2.0 151 627-779 7-210 (268)
213 3hko_A Calcium/calmodulin-depe 99.9 9.6E-24 3.3E-28 229.9 2.9 158 622-779 20-280 (345)
214 3ll6_A Cyclin G-associated kin 99.9 9.3E-24 3.2E-28 229.0 2.8 151 628-778 28-256 (337)
215 3fdn_A Serine/threonine-protei 99.9 1.1E-23 3.8E-28 222.1 3.3 150 626-779 7-211 (279)
216 1csn_A Casein kinase-1; phosph 99.9 5.9E-24 2E-28 226.4 1.1 149 628-778 10-221 (298)
217 1opk_A P150, C-ABL, proto-onco 99.9 6.1E-24 2.1E-28 242.7 1.1 150 628-779 220-424 (495)
218 3f3z_A Calcium/calmodulin-depe 99.9 8.8E-24 3E-28 222.6 2.2 149 627-779 8-211 (277)
219 2yex_A Serine/threonine-protei 99.9 1.3E-23 4.3E-28 221.2 3.4 152 627-778 6-211 (276)
220 4hcu_A Tyrosine-protein kinase 99.9 3.9E-24 1.3E-28 224.4 -0.6 150 628-779 10-212 (269)
221 2h34_A Serine/threonine-protei 99.9 2E-23 7E-28 223.7 4.9 152 627-779 33-239 (309)
222 1luf_A Muscle-specific tyrosin 99.9 7.7E-24 2.6E-28 230.4 1.5 154 626-779 45-281 (343)
223 3brb_A Proto-oncogene tyrosine 99.9 1.8E-23 6E-28 224.6 4.2 154 626-779 32-254 (313)
224 3cok_A Serine/threonine-protei 99.9 2.7E-23 9.1E-28 219.1 5.5 150 627-778 10-215 (278)
225 1ua2_A CAK, cell division prot 99.9 1.4E-23 4.9E-28 228.7 3.5 152 625-778 7-216 (346)
226 3i6u_A CDS1, serine/threonine- 99.9 1.1E-23 3.7E-28 235.6 2.2 151 625-778 132-347 (419)
227 4ay9_X Follicle-stimulating ho 99.9 4.9E-22 1.7E-26 216.8 15.2 241 207-461 12-256 (350)
228 3cvr_A Invasion plasmid antige 99.9 8.4E-23 2.9E-27 234.6 9.4 207 32-301 35-254 (571)
229 3cc6_A Protein tyrosine kinase 99.9 9.2E-24 3.2E-28 223.0 1.3 151 627-778 11-218 (281)
230 4hgt_A Casein kinase I isoform 99.9 1E-23 3.4E-28 224.3 1.4 153 625-779 6-219 (296)
231 3pg1_A Mitogen-activated prote 99.9 3.1E-23 1.1E-27 227.5 5.2 159 617-778 11-237 (362)
232 2eva_A TAK1 kinase - TAB1 chim 99.9 1.8E-23 6.1E-28 223.9 3.2 144 628-778 8-206 (307)
233 3gxj_A TGF-beta receptor type- 99.9 8.9E-24 3E-28 225.5 0.9 141 628-771 3-214 (303)
234 3f66_A Hepatocyte growth facto 99.9 1.8E-23 6.3E-28 222.7 2.9 150 628-777 25-235 (298)
235 3gen_A Tyrosine-protein kinase 99.9 8.1E-24 2.8E-28 223.7 -0.0 151 627-779 23-226 (283)
236 1p4o_A Insulin-like growth fac 99.9 1.2E-23 4.1E-28 226.8 1.2 158 621-778 18-244 (322)
237 4agu_A Cyclin-dependent kinase 99.9 2.8E-23 9.6E-28 222.7 4.1 149 628-778 3-206 (311)
238 1wak_A Serine/threonine-protei 99.9 2.5E-23 8.6E-28 231.1 3.8 146 627-778 36-296 (397)
239 3op5_A Serine/threonine-protei 99.9 6.2E-24 2.1E-28 233.2 -1.2 153 626-778 33-264 (364)
240 3mi9_A Cell division protein k 99.9 1.8E-23 6.2E-28 228.3 2.5 152 627-778 16-232 (351)
241 4aaa_A Cyclin-dependent kinase 99.9 2.8E-23 9.4E-28 224.9 3.9 149 628-778 25-228 (331)
242 2a2a_A Death-associated protei 99.9 1.7E-23 5.6E-28 225.7 2.0 149 627-778 11-221 (321)
243 2wtk_C Serine/threonine-protei 99.9 3.9E-23 1.3E-27 220.9 4.9 152 627-778 4-216 (305)
244 2rku_A Serine/threonine-protei 99.9 3.6E-23 1.2E-27 220.0 4.6 149 628-778 15-218 (294)
245 1nxk_A MAP kinase-activated pr 99.9 4.5E-23 1.5E-27 229.0 5.2 143 628-778 61-266 (400)
246 1u46_A ACK-1, activated CDC42 99.9 1.2E-23 4E-28 223.3 0.3 152 628-779 18-229 (291)
247 4ay9_X Follicle-stimulating ho 99.9 3.3E-21 1.1E-25 210.2 19.7 241 231-487 12-258 (350)
248 2owb_A Serine/threonine-protei 99.9 3.1E-23 1.1E-27 224.9 3.5 150 627-778 40-244 (335)
249 3lxl_A Tyrosine-protein kinase 99.9 1.4E-23 4.6E-28 227.0 0.6 151 628-778 23-233 (327)
250 4exu_A Mitogen-activated prote 99.9 4.6E-23 1.6E-27 226.9 4.8 147 627-778 41-245 (371)
251 3c1x_A Hepatocyte growth facto 99.9 9.2E-24 3.1E-28 232.1 -0.8 149 630-778 91-300 (373)
252 3uc3_A Serine/threonine-protei 99.9 1.5E-23 5E-28 229.7 0.7 148 627-778 19-221 (361)
253 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.5E-23 5E-28 226.9 0.7 153 624-778 30-241 (329)
254 2vgo_A Serine/threonine-protei 99.9 7.9E-23 2.7E-27 216.2 6.3 147 628-778 14-215 (284)
255 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.2E-23 4E-28 237.7 -0.3 150 627-778 183-385 (452)
256 4fvq_A Tyrosine-protein kinase 99.9 1.4E-23 4.8E-28 222.5 0.3 142 628-775 8-218 (289)
257 3mtl_A Cell division protein k 99.9 1E-23 3.4E-28 227.7 -0.9 149 628-778 2-204 (324)
258 3kfa_A Tyrosine-protein kinase 99.9 1.8E-23 6E-28 221.6 0.9 152 626-779 11-217 (288)
259 3uzp_A CKI-delta, CKID, casein 99.9 2E-23 6.7E-28 222.1 1.2 150 627-778 8-218 (296)
260 2pvf_A Fibroblast growth facto 99.9 3.4E-23 1.2E-27 224.5 2.9 151 628-778 35-263 (334)
261 3kn6_A Ribosomal protein S6 ki 99.9 4.8E-23 1.6E-27 222.3 4.0 141 633-778 16-212 (325)
262 2b9h_A MAP kinase FUS3, mitoge 99.9 5.1E-23 1.7E-27 224.9 4.0 152 627-778 10-226 (353)
263 1t4h_A Serine/threonine-protei 99.9 9.7E-23 3.3E-27 216.2 6.1 144 630-778 28-232 (290)
264 1u59_A Tyrosine-protein kinase 99.9 3.7E-23 1.3E-27 219.1 2.8 139 641-779 37-218 (287)
265 1qpc_A LCK kinase; alpha beta 99.9 3.1E-23 1.1E-27 218.7 2.1 149 628-778 13-214 (279)
266 3kvw_A DYRK2, dual specificity 99.9 4.9E-23 1.7E-27 230.9 3.8 146 627-778 96-302 (429)
267 3coi_A Mitogen-activated prote 99.9 7.8E-23 2.7E-27 223.5 5.0 147 627-778 23-227 (353)
268 2y7j_A Phosphorylase B kinase 99.9 1.1E-22 3.6E-27 223.3 6.1 155 621-778 87-308 (365)
269 2qr7_A Ribosomal protein S6 ki 99.9 8.4E-24 2.9E-28 229.7 -2.8 146 626-777 20-222 (342)
270 3kmu_A ILK, integrin-linked ki 99.9 3E-23 1E-27 217.5 1.5 145 628-779 10-215 (271)
271 1mqb_A Ephrin type-A receptor 99.9 4.3E-23 1.5E-27 223.6 2.7 150 629-778 45-254 (333)
272 2jam_A Calcium/calmodulin-depe 99.9 2.6E-23 9E-28 222.2 1.0 148 627-778 8-210 (304)
273 4eut_A Serine/threonine-protei 99.9 2.3E-23 7.8E-28 231.3 0.5 147 628-777 9-225 (396)
274 1byg_A CSK, protein (C-termina 99.9 3.3E-23 1.1E-27 218.4 1.6 146 627-779 20-219 (278)
275 3mwu_A Calmodulin-domain prote 99.9 5.1E-23 1.7E-27 235.0 3.3 148 627-778 21-225 (486)
276 3nyv_A Calmodulin-domain prote 99.9 1.2E-23 4.2E-28 240.1 -1.9 149 627-779 25-231 (484)
277 4fl3_A Tyrosine-protein kinase 99.9 2.2E-23 7.5E-28 244.4 -0.0 138 642-779 397-577 (635)
278 3nsz_A CK II alpha, casein kin 99.9 7E-23 2.4E-27 221.6 3.9 144 628-777 36-233 (330)
279 3sv0_A Casein kinase I-like; t 99.9 2.7E-23 9.1E-28 235.3 0.4 151 627-779 6-217 (483)
280 3is5_A Calcium-dependent prote 99.9 2.6E-23 9.1E-28 220.0 0.2 148 628-779 22-229 (285)
281 3a7i_A MST3 kinase, serine/thr 99.9 6.2E-23 2.1E-27 219.2 3.0 150 627-778 21-222 (303)
282 1xbb_A Tyrosine-protein kinase 99.9 2.1E-23 7.1E-28 221.6 -0.7 153 627-779 15-225 (291)
283 2jii_A Serine/threonine-protei 99.9 2.9E-23 1E-27 226.8 0.4 146 628-778 42-271 (352)
284 3lij_A Calcium/calmodulin depe 99.9 5E-23 1.7E-27 235.5 2.3 149 627-779 36-241 (494)
285 2clq_A Mitogen-activated prote 99.9 3.8E-23 1.3E-27 219.8 1.2 148 629-778 23-228 (295)
286 4e7w_A Glycogen synthase kinas 99.9 4E-23 1.4E-27 229.1 1.3 144 628-778 40-245 (394)
287 3fme_A Dual specificity mitoge 99.9 4.7E-23 1.6E-27 218.5 1.5 148 627-777 6-215 (290)
288 2ozo_A Tyrosine-protein kinase 99.9 2.6E-23 8.8E-28 243.2 -0.6 138 642-779 364-544 (613)
289 2h8h_A Proto-oncogene tyrosine 99.9 2.8E-23 9.6E-28 239.4 -0.2 150 627-778 266-468 (535)
290 3lxp_A Non-receptor tyrosine-p 99.9 5.5E-23 1.9E-27 221.2 2.1 148 631-778 34-240 (318)
291 4e5w_A Tyrosine-protein kinase 99.9 3.9E-23 1.3E-27 220.6 0.8 150 628-777 21-231 (302)
292 3e3p_A Protein kinase, putativ 99.9 6.5E-23 2.2E-27 224.7 2.6 154 621-778 16-235 (360)
293 2x7f_A TRAF2 and NCK-interacti 99.9 1E-23 3.5E-28 227.8 -3.7 161 615-778 11-237 (326)
294 3eb0_A Putative uncharacterize 99.9 6.9E-23 2.3E-27 226.5 2.8 148 624-778 3-245 (383)
295 3q5i_A Protein kinase; CDPK, m 99.9 1.1E-22 3.7E-27 233.3 4.3 149 627-779 35-251 (504)
296 3rgf_A Cyclin-dependent kinase 99.9 4.9E-23 1.7E-27 229.5 1.3 136 641-778 48-239 (405)
297 2o6s_A Variable lymphocyte rec 99.9 2.3E-21 7.9E-26 194.9 13.3 177 333-520 10-186 (208)
298 3dzo_A Rhoptry kinase domain; 99.9 1.2E-22 4.1E-27 226.6 4.2 146 627-778 77-320 (413)
299 2r3i_A Cell division protein k 99.9 1.1E-22 3.9E-27 216.6 3.8 149 628-778 3-207 (299)
300 2i6l_A Mitogen-activated prote 99.9 9.3E-23 3.2E-27 219.4 3.1 152 628-779 11-229 (320)
301 3cek_A Dual specificity protei 99.9 5.8E-23 2E-27 220.5 1.4 159 620-779 20-243 (313)
302 2o6s_A Variable lymphocyte rec 99.9 3.5E-21 1.2E-25 193.6 14.2 163 330-500 28-190 (208)
303 3t9t_A Tyrosine-protein kinase 99.9 3.3E-23 1.1E-27 216.8 -0.7 149 628-778 8-209 (267)
304 3bhy_A Death-associated protei 99.9 6E-23 2.1E-27 216.9 1.3 149 628-779 5-215 (283)
305 2rio_A Serine/threonine-protei 99.9 1.6E-22 5.4E-27 227.2 4.7 146 630-778 17-243 (434)
306 2ac3_A MAP kinase-interacting 99.9 4E-23 1.4E-27 222.0 -0.2 151 628-778 12-229 (316)
307 2yfx_A Tyrosine-protein kinase 99.9 5.1E-23 1.7E-27 222.5 0.6 151 628-778 30-249 (327)
308 1vzo_A Ribosomal protein S6 ki 99.9 1.3E-23 4.3E-28 229.8 -4.3 149 628-777 54-264 (355)
309 3cvr_A Invasion plasmid antige 99.8 3.3E-21 1.1E-25 221.4 15.1 188 229-475 60-254 (571)
310 3g2f_A Bone morphogenetic prot 99.8 1.5E-22 5.1E-27 219.6 3.8 148 627-777 12-237 (336)
311 2w5a_A Serine/threonine-protei 99.8 4.6E-23 1.6E-27 217.3 -0.3 151 627-779 5-220 (279)
312 2v62_A Serine/threonine-protei 99.8 3.1E-23 1.1E-27 225.9 -1.7 150 628-777 37-262 (345)
313 1x8b_A WEE1HU, WEE1-like prote 99.8 9.8E-23 3.3E-27 215.6 2.1 146 626-777 9-233 (289)
314 2wqm_A Serine/threonine-protei 99.8 1.2E-22 4E-27 217.8 2.5 150 627-778 31-239 (310)
315 3p23_A Serine/threonine-protei 99.8 8.1E-23 2.8E-27 229.0 1.3 149 627-778 23-233 (432)
316 2buj_A Serine/threonine-protei 99.8 1.5E-22 5.1E-27 217.7 2.8 151 627-777 28-248 (317)
317 2w1i_A JAK2; chromosomal rearr 99.8 7.2E-23 2.5E-27 221.1 0.3 151 628-778 41-251 (326)
318 2ycf_A Serine/threonine-protei 99.8 1.2E-22 4.3E-27 218.9 2.1 149 627-778 9-222 (322)
319 3eqc_A Dual specificity mitoge 99.8 1E-22 3.6E-27 223.1 1.4 147 628-778 33-233 (360)
320 1b6c_B TGF-B superfamily recep 99.8 3E-22 1E-26 217.7 4.7 149 620-771 34-253 (342)
321 2h6d_A 5'-AMP-activated protei 99.8 1.5E-22 5.2E-27 213.0 2.1 148 628-778 11-214 (276)
322 1q8y_A SR protein kinase; tran 99.8 1.8E-22 6.3E-27 222.2 2.7 145 628-778 19-238 (373)
323 1phk_A Phosphorylase kinase; g 99.8 2.5E-22 8.7E-27 213.8 3.7 149 627-778 16-232 (298)
324 3aln_A Dual specificity mitoge 99.8 2.1E-22 7E-27 217.7 3.0 148 628-778 22-232 (327)
325 3mdy_A Bone morphogenetic prot 99.8 4.7E-22 1.6E-26 215.6 5.8 149 623-774 32-251 (337)
326 3lm5_A Serine/threonine-protei 99.8 9.6E-23 3.3E-27 220.3 0.1 156 620-778 20-236 (327)
327 3an0_A Dual specificity mitoge 99.8 9.4E-23 3.2E-27 221.6 -0.1 149 627-778 50-260 (340)
328 2j7t_A Serine/threonine-protei 99.8 6.7E-23 2.3E-27 218.7 -1.4 150 627-778 18-225 (302)
329 2vwi_A Serine/threonine-protei 99.8 6.1E-23 2.1E-27 219.0 -1.8 152 627-778 14-230 (303)
330 3com_A Serine/threonine-protei 99.8 2.1E-22 7.1E-27 216.2 2.3 148 627-778 28-228 (314)
331 2j0j_A Focal adhesion kinase 1 99.8 1.6E-22 5.5E-27 238.0 1.3 151 628-779 390-597 (656)
332 2pml_X PFPK7, Ser/Thr protein 99.8 5.4E-22 1.8E-26 216.3 5.0 149 627-779 30-256 (348)
333 2eu9_A Dual specificity protei 99.8 5.8E-22 2E-26 216.4 5.2 146 627-778 18-242 (355)
334 4b8c_D Glucose-repressible alc 99.8 1.9E-22 6.4E-27 240.2 1.2 233 4-287 127-369 (727)
335 1zy4_A Serine/threonine-protei 99.8 2.1E-22 7.3E-27 214.7 1.5 144 626-770 4-226 (303)
336 1z57_A Dual specificity protei 99.8 6.3E-22 2.1E-26 214.6 5.1 145 628-778 14-237 (339)
337 2vx3_A Dual specificity tyrosi 99.8 9E-22 3.1E-26 217.5 6.0 149 624-778 50-261 (382)
338 3qa8_A MGC80376 protein; kinas 99.8 1.4E-21 4.7E-26 226.1 6.9 147 628-777 14-225 (676)
339 2a19_B Interferon-induced, dou 99.8 4.6E-22 1.6E-26 210.1 2.4 144 627-777 10-223 (284)
340 1fvr_A Tyrosine-protein kinase 99.8 3.1E-22 1E-26 216.3 1.0 149 628-779 25-246 (327)
341 1blx_A Cyclin-dependent kinase 99.8 2.5E-22 8.4E-27 216.8 -0.2 151 625-778 8-222 (326)
342 2dyl_A Dual specificity mitoge 99.8 4.7E-22 1.6E-26 213.8 1.6 149 627-778 24-232 (318)
343 2vuw_A Serine/threonine-protei 99.8 1.1E-21 3.9E-26 212.7 2.9 143 627-777 19-279 (336)
344 3e6j_A Variable lymphocyte rec 99.8 5.6E-20 1.9E-24 187.6 15.2 165 32-244 11-175 (229)
345 2y4i_B KSR2, HKSR2, kinase sup 99.8 1E-22 3.5E-27 219.1 -6.0 152 627-779 32-247 (319)
346 3a99_A Proto-oncogene serine/t 99.8 2.1E-22 7.2E-27 216.9 -3.6 148 627-778 42-252 (320)
347 2v70_A SLIT-2, SLIT homolog 2 99.8 7.4E-20 2.5E-24 185.4 14.9 155 333-491 14-169 (220)
348 2wei_A Calmodulin-domain prote 99.8 7.9E-22 2.7E-26 208.9 0.2 150 626-779 20-226 (287)
349 2v70_A SLIT-2, SLIT homolog 2 99.8 6.8E-20 2.3E-24 185.7 13.6 159 356-517 12-171 (220)
350 2iwi_A Serine/threonine-protei 99.8 1E-21 3.5E-26 210.7 -0.8 151 624-778 27-242 (312)
351 2xot_A Amphoterin-induced prot 99.8 5.2E-20 1.8E-24 201.5 12.5 178 333-514 21-204 (361)
352 4azs_A Methyltransferase WBDD; 99.8 1.6E-21 5.3E-26 225.4 0.3 131 641-774 259-437 (569)
353 1m9s_A Internalin B; cell inva 99.8 1.3E-19 4.5E-24 210.4 16.1 241 203-501 20-260 (605)
354 1h6t_A Internalin B; cell adhe 99.8 1E-19 3.4E-24 192.9 13.6 172 327-513 43-214 (291)
355 3fhr_A MAP kinase-activated pr 99.8 3.7E-21 1.3E-25 208.6 2.6 144 627-778 27-232 (336)
356 2pzi_A Probable serine/threoni 99.8 4.1E-21 1.4E-25 228.2 3.1 142 628-777 80-278 (681)
357 1dce_A Protein (RAB geranylger 99.8 6.1E-22 2.1E-26 228.6 -4.0 204 274-506 346-567 (567)
358 1dce_A Protein (RAB geranylger 99.8 2.7E-22 9.4E-27 231.6 -7.0 202 252-482 348-567 (567)
359 1m9s_A Internalin B; cell inva 99.8 1E-19 3.5E-24 211.3 14.0 191 254-490 22-212 (605)
360 2v9t_B SLIT homolog 2 protein 99.8 2.1E-19 7E-24 182.1 14.2 153 333-489 14-166 (220)
361 2v9t_B SLIT homolog 2 protein 99.8 2.9E-19 1E-23 181.0 14.5 154 358-514 14-167 (220)
362 3e6j_A Variable lymphocyte rec 99.8 6.3E-19 2.2E-23 179.8 16.2 137 379-516 40-176 (229)
363 1h6t_A Internalin B; cell adhe 99.8 2.7E-19 9.4E-24 189.5 12.7 186 258-489 29-214 (291)
364 2xot_A Amphoterin-induced prot 99.8 5.5E-19 1.9E-23 193.4 13.7 176 231-440 21-202 (361)
365 4b8c_D Glucose-repressible alc 99.8 1.2E-19 4.1E-24 216.0 3.4 155 208-373 205-359 (727)
366 4ezg_A Putative uncharacterize 99.8 3.7E-18 1.3E-22 169.7 13.3 152 328-487 42-193 (197)
367 3uqc_A Probable conserved tran 99.8 1.6E-19 5.5E-24 190.8 2.9 123 628-779 31-206 (286)
368 1xeu_A Internalin C; cellular 99.7 1.5E-18 5E-23 180.9 9.9 171 202-394 17-187 (263)
369 1w8a_A SLIT protein; signaling 99.7 9.2E-18 3.1E-22 166.1 14.8 131 358-491 11-142 (192)
370 4ezg_A Putative uncharacterize 99.7 6.4E-18 2.2E-22 168.1 13.2 155 351-513 41-195 (197)
371 1xeu_A Internalin C; cellular 99.7 2.4E-18 8.1E-23 179.4 9.6 171 299-490 17-187 (263)
372 3m2w_A MAP kinase-activated pr 99.7 1.4E-18 4.8E-23 185.0 4.5 122 628-778 17-201 (299)
373 1w8a_A SLIT protein; signaling 99.7 4.2E-17 1.4E-21 161.3 12.4 132 382-516 11-143 (192)
374 3sb4_A Hypothetical leucine ri 99.7 9.7E-18 3.3E-22 181.1 6.7 102 402-505 225-327 (329)
375 2ell_A Acidic leucine-rich nuc 99.7 1.4E-16 4.8E-21 153.9 13.1 132 355-488 24-160 (168)
376 3sb4_A Hypothetical leucine ri 99.7 3.8E-17 1.3E-21 176.4 9.6 266 203-482 48-328 (329)
377 2je0_A Acidic leucine-rich nuc 99.7 1.3E-16 4.5E-21 150.8 11.9 127 355-483 17-148 (149)
378 2ell_A Acidic leucine-rich nuc 99.7 8E-17 2.7E-21 155.6 10.3 134 377-512 22-160 (168)
379 2je0_A Acidic leucine-rich nuc 99.7 9.3E-17 3.2E-21 151.8 9.1 130 377-508 15-149 (149)
380 2wfh_A SLIT homolog 2 protein 99.7 5.8E-16 2E-20 153.1 13.4 129 382-514 13-141 (193)
381 2o6r_A Variable lymphocyte rec 99.7 5.4E-16 1.8E-20 151.2 12.8 133 381-516 9-141 (177)
382 2wfh_A SLIT homolog 2 protein 99.6 7.8E-16 2.7E-20 152.2 13.1 129 358-490 13-141 (193)
383 2o6r_A Variable lymphocyte rec 99.6 1.2E-15 4.3E-20 148.6 12.6 114 379-492 28-141 (177)
384 3en9_A Glycoprotease, O-sialog 99.6 5E-17 1.7E-21 186.6 2.6 136 631-768 339-531 (540)
385 4fdw_A Leucine rich hypothetic 99.6 1.1E-14 3.7E-19 160.7 17.7 252 216-486 124-381 (401)
386 1ds9_A Outer arm dynein; leuci 99.6 2.8E-17 9.5E-22 163.6 -4.8 135 326-466 14-155 (198)
387 1ds9_A Outer arm dynein; leuci 99.6 5.5E-17 1.9E-21 161.4 -3.2 142 298-445 15-158 (198)
388 1a9n_A U2A', U2A'; complex (nu 99.6 7.6E-15 2.6E-19 142.9 10.1 105 380-488 43-153 (176)
389 4fdw_A Leucine rich hypothetic 99.6 5.5E-14 1.9E-18 155.1 18.2 263 228-510 113-381 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.5 8.6E-15 2.9E-19 142.5 9.7 135 325-465 14-154 (176)
391 3g39_A Variable lymphocyte rec 99.5 6.4E-14 2.2E-18 135.4 11.0 107 381-490 11-117 (170)
392 4fs7_A Uncharacterized protein 99.5 3E-13 1E-17 149.6 16.6 236 199-479 157-392 (394)
393 3g39_A Variable lymphocyte rec 99.5 9.9E-14 3.4E-18 134.0 10.5 110 404-516 10-119 (170)
394 4fs7_A Uncharacterized protein 99.5 7.5E-13 2.6E-17 146.4 18.6 330 69-456 64-393 (394)
395 2r9u_A Variable lymphocyte rec 99.5 2.5E-13 8.5E-18 131.7 12.3 105 55-169 15-119 (174)
396 2r9u_A Variable lymphocyte rec 99.5 1.8E-13 6.2E-18 132.6 11.0 104 382-488 15-118 (174)
397 1zar_A RIO2 kinase; serine kin 99.5 2.5E-14 8.5E-19 150.2 4.7 125 620-760 82-274 (282)
398 2ifg_A High affinity nerve gro 99.4 1.2E-12 4.1E-17 142.1 10.2 108 40-169 8-117 (347)
399 3un9_A NLR family member X1; l 99.3 6.2E-14 2.1E-18 153.2 -0.8 135 378-512 125-283 (372)
400 3un9_A NLR family member X1; l 99.3 1.5E-13 5.2E-18 150.0 2.1 158 356-513 73-253 (372)
401 2ifg_A High affinity nerve gro 99.3 3.9E-12 1.3E-16 138.0 10.1 102 361-465 14-117 (347)
402 4gt6_A Cell surface protein; l 99.2 5.9E-10 2E-14 123.1 19.0 139 366-511 252-390 (394)
403 4gt6_A Cell surface protein; l 99.2 1.1E-09 3.7E-14 121.0 20.1 335 91-487 54-390 (394)
404 1zth_A RIO1 serine protein kin 99.1 9.6E-11 3.3E-15 121.2 6.6 92 630-723 49-219 (258)
405 2ra8_A Uncharacterized protein 98.9 2.2E-09 7.7E-14 116.0 7.4 83 426-510 251-341 (362)
406 2ra8_A Uncharacterized protein 98.8 1.4E-09 4.7E-14 117.7 5.3 64 402-465 251-321 (362)
407 4h09_A Hypothetical leucine ri 98.8 1.1E-07 3.8E-12 104.1 18.5 271 199-483 64-341 (379)
408 4gyi_A RIO2 kinase; protein ki 98.8 3.7E-09 1.3E-13 114.0 6.0 46 678-723 210-265 (397)
409 4h09_A Hypothetical leucine ri 98.8 8.5E-08 2.9E-12 105.0 16.9 148 269-427 209-356 (379)
410 1io0_A Tropomodulin; LRR prote 98.6 3.7E-08 1.3E-12 96.1 5.4 116 373-488 30-164 (185)
411 3rw6_A Nuclear RNA export fact 98.6 7.3E-09 2.5E-13 106.3 0.4 79 425-505 168-257 (267)
412 3rw6_A Nuclear RNA export fact 98.6 2.2E-08 7.4E-13 102.7 3.2 80 401-482 168-258 (267)
413 1io0_A Tropomodulin; LRR prote 98.5 4.8E-08 1.6E-12 95.2 4.4 118 395-512 28-164 (185)
414 3e4g_A ATP synthase subunit S, 97.4 9.8E-05 3.3E-09 70.1 4.5 82 380-461 62-149 (176)
415 3e4g_A ATP synthase subunit S, 97.3 0.00011 3.7E-09 69.8 3.5 83 403-485 61-149 (176)
416 1pgv_A TMD-1, tropomodulin TMD 97.3 0.00024 8.3E-09 68.7 5.8 86 376-461 38-136 (197)
417 3tm0_A Aminoglycoside 3'-phosp 97.2 0.00013 4.5E-09 74.9 2.5 31 692-722 183-213 (263)
418 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00051 1.7E-08 66.4 5.0 113 398-510 36-168 (197)
419 1nd4_A Aminoglycoside 3'-phosp 97.0 0.00023 7.9E-09 72.7 2.6 31 692-722 184-214 (264)
420 3rfe_A Platelet glycoprotein I 96.7 0.0031 1.1E-07 56.8 7.1 55 56-112 12-67 (130)
421 3rfe_A Platelet glycoprotein I 96.5 0.0041 1.4E-07 56.1 6.3 56 431-488 12-68 (130)
422 3sg8_A APH(2'')-ID; antibiotic 96.1 0.00038 1.3E-08 73.2 -3.0 83 692-776 191-288 (304)
423 3r70_A Aminoglycoside phosphot 92.9 0.26 8.8E-06 51.7 9.0 33 692-724 207-239 (320)
424 3dxp_A Putative acyl-COA dehyd 92.6 0.11 3.7E-06 55.6 5.5 32 691-722 215-248 (359)
425 2q83_A YTAA protein; 2635576, 89.9 0.23 7.9E-06 52.3 4.7 33 690-722 220-252 (346)
426 2pyw_A Uncharacterized protein 89.4 0.26 8.8E-06 53.9 4.7 33 690-723 230-262 (420)
427 4gkh_A Aminoglycoside 3'-phosp 84.2 0.49 1.7E-05 47.9 3.0 34 690-723 191-224 (272)
428 3ovc_A Hygromycin-B 4-O-kinase 83.5 0.74 2.5E-05 49.1 4.2 32 692-723 213-244 (362)
429 2ppq_A HSK, HK, homoserine kin 83.5 0.58 2E-05 48.8 3.3 32 691-722 186-217 (322)
430 3csv_A Aminoglycoside phosphot 82.8 0.95 3.3E-05 47.4 4.7 34 690-723 181-218 (333)
431 3f7w_A Putative fructosamine-3 82.4 0.46 1.6E-05 48.8 1.9 25 691-716 187-211 (288)
432 2l2t_A Receptor tyrosine-prote 82.1 0.78 2.7E-05 31.8 2.3 6 589-594 31-36 (44)
433 3tdw_A Gentamicin resistance p 81.2 1 3.5E-05 46.7 4.1 34 690-723 188-225 (306)
434 3ats_A Putative uncharacterize 80.0 0.74 2.5E-05 48.8 2.6 32 691-722 221-252 (357)
435 1zyl_A Hypothetical protein YI 79.6 1.2 4E-05 46.5 4.0 32 690-723 193-224 (328)
436 3c5i_A Choline kinase; choline 74.8 2.1 7.2E-05 45.5 4.3 31 691-722 211-241 (369)
437 3i1a_A Spectinomycin phosphotr 74.1 3.4 0.00012 43.3 5.7 33 691-723 205-237 (339)
438 2olc_A MTR kinase, methylthior 72.5 2.9 9.8E-05 45.0 4.7 33 690-723 225-257 (397)
439 3d1u_A Putative fructosamine-3 71.6 2.6 8.8E-05 43.2 3.9 47 674-722 166-216 (288)
440 2jwa_A Receptor tyrosine-prote 70.2 2.3 7.8E-05 29.5 2.0 8 590-597 32-39 (44)
441 2qg7_A Ethanolamine kinase PV0 69.6 4.5 0.00016 44.4 5.5 33 690-722 288-357 (458)
442 3dxq_A Choline/ethanolamine ki 69.4 3.6 0.00012 42.2 4.5 33 690-723 171-203 (301)
443 1nw1_A Choline kinase (49.2 KD 66.6 3.2 0.00011 45.2 3.5 33 690-722 247-307 (429)
444 3jr1_A Putative fructosamine-3 64.7 5.1 0.00018 41.5 4.4 45 673-718 187-232 (312)
445 3feg_A Choline/ethanolamine ki 58.9 6.3 0.00022 42.0 3.9 33 690-722 218-254 (379)
446 3f2s_A CK, chetk-alpha, cholin 54.4 8.5 0.00029 41.3 4.0 33 690-722 242-280 (401)
447 3g15_A CK, chetk-alpha, cholin 47.8 19 0.00065 38.6 5.5 30 693-722 245-280 (401)
448 3mes_A Choline kinase; malaria 47.7 12 0.00042 40.4 3.9 31 691-722 261-291 (424)
449 2ks1_B Epidermal growth factor 33.5 43 0.0015 23.2 3.4 28 574-601 13-41 (44)
450 2lz0_A Uncharacterized protein 28.5 65 0.0022 26.6 4.6 41 91-132 11-51 (100)
451 2l2t_A Receptor tyrosine-prote 27.7 57 0.0019 22.5 3.2 28 575-602 13-41 (44)
452 2klu_A T-cell surface glycopro 20.9 86 0.0029 23.5 3.3 8 575-582 13-20 (70)
453 2lz0_A Uncharacterized protein 20.7 1.5E+02 0.0051 24.4 5.3 47 63-110 7-53 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-77 Score=722.61 Aligned_cols=538 Identities=31% Similarity=0.480 Sum_probs=416.1
Q ss_pred chHHHHHHHHHHHHhccCCCccccccccCCCCCCccceeeeeCCCCCcEEEEEcCCCCCccc---cC-------------
Q 045449 6 IISQHQQALLALKAHISYDHTNLFARNWTSSTSVCIWIGITCDVNSHRVIGLNISSFNLQGT---IT------------- 69 (823)
Q Consensus 6 ~~~~~~~aLl~~k~~~~~~~~~~~~~~W~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~---~~------------- 69 (823)
..++||+|||+||+++. ||. .++ +|+.++|||+|.||+|+ +++|++|||+++.+.|. ++
T Consensus 9 ~~~~~~~all~~k~~~~-~~~-~l~-~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLP-DKN-LLP-DWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp CHHHHHHHHHHHHTTCS-CTT-SST-TCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred CCHHHHHHHHHHHhhCC-Ccc-ccc-CCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 46899999999999986 777 676 99988999999999998 68999999999999887 54
Q ss_pred ----------cccCCCCCCcEEEccCCCCCCCCCC--CCCCCCCCCEEECCCCcCcCCCchhh-hcCCCCcEEecccccc
Q 045449 70 ----------PQLGNLSSLQTLDLSHNKLSGNIPS--SIFNMHTLKLLDFSDNQLFGSLSSFI-FNMSSMTTIDLSINRL 136 (823)
Q Consensus 70 ----------~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l 136 (823)
+.++++++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|||++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 4566777788888888887777776 77777777777777777766665543 4455555555555554
Q ss_pred cCccCcc---c--------------------------------------cCCCCCCccccccceeeeccceeeccCcccc
Q 045449 137 SGELPAN---I--------------------------------------CKIPSTLSKCKQLEELNLGFNNLSGAIPKEI 175 (823)
Q Consensus 137 ~~~~p~~---~--------------------------------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 175 (823)
++..|.. + ...+..++++++|++|+|++|++++.+|..+
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l 243 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAI 243 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHT
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcccHHH
Confidence 4333221 0 0111225666777777777777776666666
Q ss_pred ccchhhHHHHHhhcCCCc----------------------ccCCcccCCc-chhhhhccccccccCCccccccCCCCCcE
Q 045449 176 GNLTKLKEIISTITNSTV----------------------CEIPREIGNL-PYLARLALATNNLVGVVPVTIFNMSALKE 232 (823)
Q Consensus 176 ~~l~~L~~L~~l~~n~~~----------------------~~ip~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 232 (823)
+++++|++|. +..|.+. +.+|..+... ++|++|+|++|++++.+|..|.++++|++
T Consensus 244 ~~l~~L~~L~-Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 322 (768)
T 3rgz_A 244 STCTELKLLN-ISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLES 322 (768)
T ss_dssp TTCSSCCEEE-CCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCE
T ss_pred hcCCCCCEEE-CCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccE
Confidence 6666666553 4444443 3555555554 77777777777777777777777777777
Q ss_pred EEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCC---------------------------CCCCeEEee
Q 045449 233 ISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNS---------------------------SKLSDLELG 285 (823)
Q Consensus 233 L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---------------------------~~L~~L~Ls 285 (823)
|+|++|.++|.+|...+..+++|++|+|++|++++.+|..+.++ ++|++|+++
T Consensus 323 L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~ 402 (768)
T 3rgz_A 323 LALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402 (768)
T ss_dssp EECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECC
T ss_pred EECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECC
Confidence 77777777777776644446777777777777666666655444 345555555
Q ss_pred cccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCC
Q 045449 286 ENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANC 365 (823)
Q Consensus 286 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N 365 (823)
+|++++.+|..++++++|++|++++|++++. .+..+.++++|+.|++++|.+++.+|..+..+ ++|++|++++|
T Consensus 403 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~N 476 (768)
T 3rgz_A 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGT-----IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV-KTLETLILDFN 476 (768)
T ss_dssp SSEEEEECCGGGGGCTTCCEEECCSSEEESC-----CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC-TTCCEEECCSS
T ss_pred CCccccccCHHHhcCCCCCEEECcCCcccCc-----ccHHHhcCCCCCEEECCCCcccCcCCHHHcCC-CCceEEEecCC
Confidence 5555556666677777777777777777766 55678888888888888888888888888888 68999999999
Q ss_pred cceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccc
Q 045449 366 SISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPS 445 (823)
Q Consensus 366 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 445 (823)
++++.+|..+.++++|++|+|++|+++|.+|.+++.+++|++|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|.
T Consensus 477 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred cccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 99988898899999999999999999988999999999999999999999999999999999999999999988887776
Q ss_pred ccc----------------------------------------------------------------------CCCCCCe
Q 045449 446 CLG----------------------------------------------------------------------NLTSVRV 455 (823)
Q Consensus 446 ~~~----------------------------------------------------------------------~l~~L~~ 455 (823)
.+. .+++|+.
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~ 636 (768)
T 3rgz_A 557 AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636 (768)
T ss_dssp GGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCE
T ss_pred HHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccE
Confidence 442 3467888
Q ss_pred EeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCccc---------------
Q 045449 456 LYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIG--------------- 520 (823)
Q Consensus 456 L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~--------------- 520 (823)
|||++|+++|.+|..++.++.|+.||||+|+++|.+|..+++++.|+.|||++|+++|.||..++
T Consensus 637 LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp EECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred EECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CccCCCCCCCCCCCcccccCCcccCCCCCCCCCCCCCC
Q 045449 521 EGEIPRGGPFANLTAKSFMGNELLCGLPDLQVSPCKPN 558 (823)
Q Consensus 521 ~g~ip~~~~~~~~~~~~~~~n~~~c~~~~~~~~~c~~~ 558 (823)
+|.||..+++.++...+|.||+++||.|.. +|...
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~---~C~~~ 751 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLCGYPLP---RCDPS 751 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEESTTSC---CCCSC
T ss_pred cccCCCchhhccCCHHHhcCCchhcCCCCc---CCCCC
Confidence 689999999999999999999999998853 68644
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.3e-63 Score=599.28 Aligned_cols=456 Identities=30% Similarity=0.465 Sum_probs=389.2
Q ss_pred cEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecc
Q 045449 53 RVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLS 132 (823)
Q Consensus 53 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 132 (823)
+++.|++++|.+.+.++. .++++|++|+|++|++++.+|. |+++++|++|+|++|.+++.+|..|+++++|++|+|+
T Consensus 179 ~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 255 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255 (768)
T ss_dssp TCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECC
T ss_pred CCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECC
Confidence 456666666666554432 5566666666666666655554 6666666666666666666666666666666666666
Q ss_pred cccccCccCccc---------------cCCCCCCccc-cccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccC
Q 045449 133 INRLSGELPANI---------------CKIPSTLSKC-KQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEI 196 (823)
Q Consensus 133 ~N~l~~~~p~~~---------------~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~i 196 (823)
+|++++.+|..- ..+|..+..+ ++|++|+|++|++++.+|..|+++++|++|. +.+|.+.+.+
T Consensus 256 ~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~-L~~n~l~~~i 334 (768)
T 3rgz_A 256 SNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA-LSSNNFSGEL 334 (768)
T ss_dssp SSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEE-CCSSEEEEEC
T ss_pred CCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEE-CCCCcccCcC
Confidence 666555444310 0234444554 8999999999999999999999999998886 8888888888
Q ss_pred Ccc-cCCcchhhhhccccccccCCccccccCCC-CCcEEEccCCcccccCCcccccC-CCCccEEEeeccccccccCccc
Q 045449 197 PRE-IGNLPYLARLALATNNLVGVVPVTIFNMS-ALKEISLLNNSLSGSLPSRIDLS-LPNVETLNLGINSFSGTIPSSI 273 (823)
Q Consensus 197 p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~lp~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~ 273 (823)
|.. +.++++|++|+|++|++++.+|..+.+++ +|++|++++|.++|.+|..+... +++|++|+|++|++++.+|..+
T Consensus 335 p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l 414 (768)
T 3rgz_A 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414 (768)
T ss_dssp CHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGG
T ss_pred CHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHH
Confidence 876 89999999999999999989999998887 89999999999998888776532 6789999999999999999999
Q ss_pred cCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCcccccc
Q 045449 274 TNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNF 353 (823)
Q Consensus 274 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 353 (823)
.++++|++|+|++|++++.+|..|+.+++|++|++++|.+++. ++..+..+++|+.|++++|++++.+|..+..+
T Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 489 (768)
T 3rgz_A 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE-----IPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489 (768)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSC-----CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCc-----CCHHHcCCCCceEEEecCCcccCcCCHHHhcC
Confidence 9999999999999999999999999999999999999999987 56788999999999999999999999999999
Q ss_pred ccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhh---------
Q 045449 354 SLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELC--------- 424 (823)
Q Consensus 354 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--------- 424 (823)
++|++|++++|++++.+|.+++.+++|++|+|++|+++|.+|..+..+++|++|+|++|+++|.+|..+.
T Consensus 490 -~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~ 568 (768)
T 3rgz_A 490 -TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568 (768)
T ss_dssp -TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCS
T ss_pred -CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhh
Confidence 7999999999999999999999999999999999999999999999999999999999999988887543
Q ss_pred -------------------------------------------------------------cCCCCCEEEcccCcCcccc
Q 045449 425 -------------------------------------------------------------HLARLHSLVLQGNKFSGSI 443 (823)
Q Consensus 425 -------------------------------------------------------------~l~~L~~L~Ls~N~l~g~~ 443 (823)
.+++|+.|||++|+++|.+
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~i 648 (768)
T 3rgz_A 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYI 648 (768)
T ss_dssp TTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCC
T ss_pred ccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccC
Confidence 2467899999999999999
Q ss_pred cccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCc
Q 045449 444 PSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPIT 518 (823)
Q Consensus 444 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~ 518 (823)
|..+++++.|+.|+|++|+++|.+|..++++++|+.||||+|+++|.+|..+++++.|++||+++|+|+|.||..
T Consensus 649 p~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 649 PKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred CHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999976
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=4.2e-61 Score=567.93 Aligned_cols=474 Identities=19% Similarity=0.265 Sum_probs=297.1
Q ss_pred HHHHHHHHHHHHhccCCCcc-------ccccccCCCCCCccc---eeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCC
Q 045449 8 SQHQQALLALKAHISYDHTN-------LFARNWTSSTSVCIW---IGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSS 77 (823)
Q Consensus 8 ~~~~~aLl~~k~~~~~~~~~-------~~~~~W~~~~~~c~w---~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~ 77 (823)
.+|++||.+||+++..+... ... +|+.+.|||.| .||+|+.. +||+.|+|++++++|.+|+++++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~-~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGA-NWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------C-CCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCC-CCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 47999999999997544322 122 79989999999 99999865 89999999999999999999999999
Q ss_pred CcEEEccCCCCC------C------CCCCCCCCCCCCCEEECCCCcCcCCCchhhhcC-CC------------------C
Q 045449 78 LQTLDLSHNKLS------G------NIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNM-SS------------------M 126 (823)
Q Consensus 78 L~~L~Ls~N~l~------g------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~------------------L 126 (823)
|++|||++|.+. | .+|... +..|+ +++++|.+.+.+|..+..+ .. +
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 999999999872 2 233322 34566 7777777777766665421 11 1
Q ss_pred cEEecc--cccccCccCccccCCCCCCccccccceeeeccceeecc-----------------Cccccc--cchhhHHHH
Q 045449 127 TTIDLS--INRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGA-----------------IPKEIG--NLTKLKEII 185 (823)
Q Consensus 127 ~~L~Ls--~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~l~--~l~~L~~L~ 185 (823)
+.+.+. .|+++| +|..+ +++++|++|+|++|+++|. +|..++ ++++|++|.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l-------~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAV-------MRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGG-------GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred hhhhhccccCCCcc-CCHHH-------hcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 222221 466665 55554 6777777777777777764 555555 555555443
Q ss_pred HhhcCCCcccCCcccCCcchhhhhcccccc-ccC-CccccccCC------CCCcEEEccCCcccccCCc--ccccCCCCc
Q 045449 186 STITNSTVCEIPREIGNLPYLARLALATNN-LVG-VVPVTIFNM------SALKEISLLNNSLSGSLPS--RIDLSLPNV 255 (823)
Q Consensus 186 ~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~g~lp~--~~~~~l~~L 255 (823)
+.+|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .+.. +++|
T Consensus 256 -L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~-l~~L 332 (636)
T 4eco_A 256 -VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQK-MKKL 332 (636)
T ss_dssp -EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTT-CTTC
T ss_pred -ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhcc-CCCC
Confidence 44444555555555555666666666665 665 566555554 66666666666666 5665 4433 6666
Q ss_pred cEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcc-cCcccccCccccCCCCcccccccccCCC--Cc
Q 045449 256 ETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRN-LEFGNIADNYLTSSTPELSFLSSLTNCK--KL 332 (823)
Q Consensus 256 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~l~~l~--~L 332 (823)
++|+|++|+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |++|++++|.++.. |..+..++ +|
T Consensus 333 ~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~l------p~~~~~~~l~~L 404 (636)
T 4eco_A 333 GMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYI------PNIFDAKSVSVM 404 (636)
T ss_dssp CEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSC------CSCCCTTCSSCE
T ss_pred CEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCccc------chhhhhcccCcc
Confidence 666666666666666 5666666666666666666 55555666666 66666666666532 23333332 56
Q ss_pred eEEEeecCCCCccCCcccc-------ccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhc-cccc--
Q 045449 333 KVLIVTGNPLDGILPKSIG-------NFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVT-FSQL-- 402 (823)
Q Consensus 333 ~~L~Ls~N~l~~~~p~~~~-------~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l-- 402 (823)
+.|++++|.+++.+|..+. .+ .+|++|++++|+++...+..+..+++|++|+|++|+++ .+|.. +...
T Consensus 405 ~~L~Ls~N~l~~~~p~~l~~~~~~~~~~-~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~ 482 (636)
T 4eco_A 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKG-INVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENE 482 (636)
T ss_dssp EEEECCSSCTTTTTTCSSCTTCSSCCCC-CCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTE
T ss_pred CEEECcCCcCCCcchhhhcccccccccC-CCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccc
Confidence 6666666666666665555 44 45666666666666333333445666666666666666 34432 2222
Q ss_pred -----CCCCEEEccCCCCCCcchHhhh--cCCCCCEEEcccCcCcccccccccCCCCCCeEec------cCCccccccch
Q 045449 403 -----QTLQAFDLTRNKLAGPITDELC--HLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYL------GLNIFTSVLSS 469 (823)
Q Consensus 403 -----~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L------s~N~l~~~~p~ 469 (823)
++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+| ++|++.+.+|.
T Consensus 483 ~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~ 560 (636)
T 4eco_A 483 NFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPE 560 (636)
T ss_dssp ECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCT
T ss_pred cccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChH
Confidence 26666666666666 4555554 66666666666666665 5666666666666666 34556666666
Q ss_pred hhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCC
Q 045449 470 TIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLS 512 (823)
Q Consensus 470 ~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 512 (823)
.+..+++|+.|||++|.+ +.+|..+. +.|+.||+++|++.
T Consensus 561 ~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 561 GITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp TGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred HHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 666666666666666666 55565544 56666666666554
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-58 Score=553.68 Aligned_cols=457 Identities=18% Similarity=0.227 Sum_probs=293.8
Q ss_pred chHHHHHHHHHHHHhccCCCccccccccCCCC-----CC--ccc------------eeeeeCCCCCcEEEEEcCCCCCcc
Q 045449 6 IISQHQQALLALKAHISYDHTNLFARNWTSST-----SV--CIW------------IGITCDVNSHRVIGLNISSFNLQG 66 (823)
Q Consensus 6 ~~~~~~~aLl~~k~~~~~~~~~~~~~~W~~~~-----~~--c~w------------~gv~c~~~~~~v~~L~L~~~~l~g 66 (823)
.-.+|++||++||+++. || +|+.+. +| |.| .||+|+. .+||+.|+|+++++.|
T Consensus 266 ~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKG 337 (876)
T ss_dssp HHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEE
T ss_pred cchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCC
Confidence 45689999999999974 44 676443 55 999 9999986 6899999999999999
Q ss_pred ccCcccCCCCCCcEEEc-cCCCCCCCCCCCC-------------------------------------------------
Q 045449 67 TITPQLGNLSSLQTLDL-SHNKLSGNIPSSI------------------------------------------------- 96 (823)
Q Consensus 67 ~~~~~l~~l~~L~~L~L-s~N~l~g~~p~~~------------------------------------------------- 96 (823)
.+|+++++|++|++||| ++|.++|..|...
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 8998887744221
Q ss_pred --CCCCCCCEEECCC--CcCcCCCchhhhcCCCCcEEecccccccCc-cCccccC---------CCCCCc--ccccccee
Q 045449 97 --FNMHTLKLLDFSD--NQLFGSLSSFIFNMSSMTTIDLSINRLSGE-LPANICK---------IPSTLS--KCKQLEEL 160 (823)
Q Consensus 97 --~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~---------~p~~~~--~l~~L~~L 160 (823)
.....++.+.++. |+|++ +|..|+++++|++|+|++|+|+|. +|..+.. +|..++ ++++|++|
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred ccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 1122334444443 77777 788888888888888888888872 2221111 344435 77777777
Q ss_pred eeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhcccccc-ccC-CccccccCCC-------CCc
Q 045449 161 NLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNN-LVG-VVPVTIFNMS-------ALK 231 (823)
Q Consensus 161 ~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~ 231 (823)
+|++|++.+.+|..|++++ +|+.|+|++|+ +++ .+|..+.+++ +|+
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~-------------------------~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~ 551 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLP-------------------------ELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQ 551 (876)
T ss_dssp EEESCTTCCSCCGGGGGCS-------------------------SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCC
T ss_pred ECcCCCCCccChHHHhCCC-------------------------CCCEEECcCCCCcccccchHHHHhhhhcccccCCcc
Confidence 7777777666666555555 44555555555 555 4554444333 566
Q ss_pred EEEccCCcccccCCc--ccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcc-cCcccc
Q 045449 232 EISLLNNSLSGSLPS--RIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRN-LEFGNI 308 (823)
Q Consensus 232 ~L~Ls~N~l~g~lp~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L 308 (823)
+|+|++|.++ .+|. .+.. +++|++|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|+|
T Consensus 552 ~L~Ls~N~L~-~ip~~~~l~~-L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~L 626 (876)
T 4ecn_A 552 IFYMGYNNLE-EFPASASLQK-MVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGF 626 (876)
T ss_dssp EEECCSSCCC-BCCCHHHHTT-CTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEEC
T ss_pred EEEeeCCcCC-ccCChhhhhc-CCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEEC
Confidence 6666666665 5555 3332 556666666666655 455 5555566666666666665 55555555555 666666
Q ss_pred cCccccCCCCcccccccccCCC--CceEEEeecCCCCccCCccc---ccc-ccccceEEecCCcceeccCccccCccccc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCK--KLKVLIVTGNPLDGILPKSI---GNF-SLSLETILMANCSISGNIPQVVGNLSNLL 382 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~p~~~---~~~-~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 382 (823)
++|.++.. |..+..++ +|+.|+|++|.++|.+|... ..+ ..+|++|+|++|+++...+..+..+++|+
T Consensus 627 s~N~L~~l------p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~ 700 (876)
T 4ecn_A 627 SHNKLKYI------PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIS 700 (876)
T ss_dssp CSSCCCSC------CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCS
T ss_pred cCCCCCcC------chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCC
Confidence 66665532 23333333 26666666666665544221 111 02566666666666632222233566666
Q ss_pred EEEcccCcCCCCchhcccc--------cCCCCEEEccCCCCCCcchHhhh--cCCCCCEEEcccCcCcccccccccCCCC
Q 045449 383 VLELGGNNLTGPIPVTFSQ--------LQTLQAFDLTRNKLAGPITDELC--HLARLHSLVLQGNKFSGSIPSCLGNLTS 452 (823)
Q Consensus 383 ~L~Ls~N~l~g~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 452 (823)
.|+|++|+++ .+|..+.. +++|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++
T Consensus 701 ~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~ 777 (876)
T 4ecn_A 701 TIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQ 777 (876)
T ss_dssp EEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTT
T ss_pred EEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCC
Confidence 6666666666 44443322 226666666666666 5555554 66666666666666665 5666666666
Q ss_pred CCeEeccC------CccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCC
Q 045449 453 VRVLYLGL------NIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSG 513 (823)
Q Consensus 453 L~~L~Ls~------N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 513 (823)
|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..+. +.|+.|||++|++..
T Consensus 778 L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 778 LKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp CCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred CCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 66666654 777788888888888888888888888 67777665 578888888888764
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.4e-56 Score=525.25 Aligned_cols=482 Identities=20% Similarity=0.197 Sum_probs=423.9
Q ss_pred ceeeeeCCC---------CCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcC
Q 045449 42 WIGITCDVN---------SHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQL 112 (823)
Q Consensus 42 w~gv~c~~~---------~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 112 (823)
+.-|.|... ...++.|||++|.+++..|.+|+++++|++|||++|+|++..|.+|.++++|++|+|++|.+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 456778642 24789999999999998899999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCC
Q 045449 113 FGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNST 192 (823)
Q Consensus 113 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~ 192 (823)
++..|..|+++++|++|+|++|++++..|..+ +++++|++|+|++|++++..+..+..+++|++|. +.+|.+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~-------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-L~~n~l 165 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPL-------HNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLD-FQNNAI 165 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCC-------TTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEE-CCSSCC
T ss_pred cccChhhhcccccccEeeccccCcccCCcchh-------ccCCcccEEECCCCcccccCcccccCCcccCEEE-cccCcc
Confidence 99999999999999999999999996545444 8899999999999999975444455588888885 888888
Q ss_pred cccCCcccCCcchhh--hhccccccccCCccccccCC-------------------------------------------
Q 045449 193 VCEIPREIGNLPYLA--RLALATNNLVGVVPVTIFNM------------------------------------------- 227 (823)
Q Consensus 193 ~~~ip~~l~~l~~L~--~L~Ls~N~l~~~~p~~~~~l------------------------------------------- 227 (823)
.+..|..++.+++|+ .|++++|++++..|..+...
T Consensus 166 ~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~ 245 (606)
T 3t6q_A 166 HYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISP 245 (606)
T ss_dssp CEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCG
T ss_pred cccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccCh
Confidence 888888899999998 89999999998877665431
Q ss_pred --------CCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCC
Q 045449 228 --------SALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGN 299 (823)
Q Consensus 228 --------~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 299 (823)
.+|+.|++++|.++ .++...+..+++|++|++++|+++ .+|..+.++++|++|++++|++++..|..+..
T Consensus 246 ~~~~~l~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 246 AVFEGLCEMSVESINLQKHYFF-NISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp GGGGGGGGSEEEEEECTTCCCS-SCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred hHhchhhcCceeEEEeecCccC-ccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 16788899999998 455554556999999999999998 78999999999999999999999998999999
Q ss_pred CcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccC--CccccccccccceEEecCCcceeccCccccC
Q 045449 300 LRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGIL--PKSIGNFSLSLETILMANCSISGNIPQVVGN 377 (823)
Q Consensus 300 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 377 (823)
+++|++|++++|.+.+..+ ...+..+++|++|++++|.+++.. |..+..+ ++|++|++++|.+++..|..|..
T Consensus 324 l~~L~~L~l~~n~~~~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~ 398 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELG----TGCLENLENLRELDLSHDDIETSDCCNLQLRNL-SHLQSLNLSYNEPLSLKTEAFKE 398 (606)
T ss_dssp CTTCSEEECCSCSSCCBCC----SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTC-TTCCEEECCSCSCEEECTTTTTT
T ss_pred cCcCCEEECCCCCcccccc----hhhhhccCcCCEEECCCCccccccCcchhcccC-CCCCEEECCCCcCCcCCHHHhcC
Confidence 9999999999999886532 235889999999999999999876 7788888 79999999999999999999999
Q ss_pred cccccEEEcccCcCCCCchhc-ccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccc---ccccccCCCCC
Q 045449 378 LSNLLVLELGGNNLTGPIPVT-FSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS---IPSCLGNLTSV 453 (823)
Q Consensus 378 l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~---~p~~~~~l~~L 453 (823)
+++|++|++++|++++..|.. +..+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 999999999999999877654 89999999999999999999999999999999999999999873 33678999999
Q ss_pred CeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCC
Q 045449 454 RVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANL 533 (823)
Q Consensus 454 ~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~ 533 (823)
+.|+|++|++++.+|..+..+++|+.|||++|++++..|..+.+++.| .|++++|++++.+|..+. .+..+
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~--------~l~~L 549 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLP--------ILSQQ 549 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHH--------HHHTS
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcc--------cCCCC
Confidence 999999999999999999999999999999999999999999999999 999999999976665542 24566
Q ss_pred CcccccCCcccCCC
Q 045449 534 TAKSFMGNELLCGL 547 (823)
Q Consensus 534 ~~~~~~~n~~~c~~ 547 (823)
...++.+|++.|..
T Consensus 550 ~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 550 RTINLRQNPLDCTC 563 (606)
T ss_dssp SEEECTTCCEECSG
T ss_pred CEEeCCCCCccccC
Confidence 78899999999864
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-55 Score=533.98 Aligned_cols=477 Identities=20% Similarity=0.206 Sum_probs=372.9
Q ss_pred ccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCC-CCCCCCCCCCCEEECCCCcCcCCCch
Q 045449 40 CIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNI-PSSIFNMHTLKLLDFSDNQLFGSLSS 118 (823)
Q Consensus 40 c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 118 (823)
|.|..|.+ ...+++.|||++|.+++..+.+|.++++|++|||++|.+.+.+ |.+|.++++|++|+|++|.|++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888887 4578999999999999999999999999999999999777666 78999999999999999999999999
Q ss_pred hhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCc-cccccchhhHHHHHhhcCCCcccCC
Q 045449 119 FIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIP-KEIGNLTKLKEIISTITNSTVCEIP 197 (823)
Q Consensus 119 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~~l~~n~~~~~ip 197 (823)
+|+++++|++|+|++|++++.+|.. ..|.++++|++|+|++|.+++..+ ..|+++++|++|. +..|.+.+..|
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~-----~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~-Ls~N~i~~~~~ 165 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKD-----GYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSID-FSSNQIFLVCE 165 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTT-----CCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEE-EESSCCCCCCS
T ss_pred HccCCcccCEeeCcCCCCCcccccC-----ccccccCCCCEEECCCCcccccccchhHhhCCCCCEEE-CCCCcCCeeCH
Confidence 9999999999999999999866653 124889999999999999987765 5789999999886 88888888888
Q ss_pred cccCCc--chhhhhccccccccCCccccccCCCC------CcEEEccCCcccccCCcccccC------------------
Q 045449 198 REIGNL--PYLARLALATNNLVGVVPVTIFNMSA------LKEISLLNNSLSGSLPSRIDLS------------------ 251 (823)
Q Consensus 198 ~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~g~lp~~~~~~------------------ 251 (823)
..+..+ ++|+.|+|+.|.+.+..|..+..+++ |++|++++|.+++.+|..+...
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~ 245 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGA 245 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBC
T ss_pred HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccc
Confidence 888887 78999999999999888877766655 8899999988876666543321
Q ss_pred -------------------CCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCcc
Q 045449 252 -------------------LPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNY 312 (823)
Q Consensus 252 -------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 312 (823)
.++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|.
T Consensus 246 ~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 246 GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCC
T ss_pred cccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCC
Confidence 2578888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCC
Q 045449 313 LTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLT 392 (823)
Q Consensus 313 l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 392 (823)
+++. .+..|.++++|+.|++++|.+++..+..|..+ ++|++|+|++|.+++.. .+++|+.|++++|+++
T Consensus 326 l~~~-----~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 326 LGEL-----YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFL-EKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLV 394 (844)
T ss_dssp CSCC-----CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSC-CCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCC
T ss_pred CCcc-----CHHHhcCCCCCCEEECCCCCCCccChhhhcCC-CCCCEEECCCCCCCccc-----CCCCcchhccCCCCcc
Confidence 8776 44577888888888888888888777777777 68888888888887432 2455555555555554
Q ss_pred --------------------CC-chhcccccCCCCEEEccCCCCCCcchH-hhhcCCCCCEEEcccCcCc-----ccccc
Q 045449 393 --------------------GP-IPVTFSQLQTLQAFDLTRNKLAGPITD-ELCHLARLHSLVLQGNKFS-----GSIPS 445 (823)
Q Consensus 393 --------------------g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----g~~p~ 445 (823)
+. .+..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..|.
T Consensus 395 ~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 395 TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 32 112234666777777777777654333 2445667777777777765 33445
Q ss_pred cccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCC
Q 045449 446 CLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIP 525 (823)
Q Consensus 446 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip 525 (823)
.|.++++|+.|+|++|++++.+|..+..+++|+.|||++|+|++..|..+. +.|+.||+++|+|+|.+|..
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~------- 545 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV------- 545 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC-------
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH-------
Confidence 677777777777777777777777777777777777777777776665554 67777777777777665544
Q ss_pred CCCCCCCCCcccccCCcccCCCC
Q 045449 526 RGGPFANLTAKSFMGNELLCGLP 548 (823)
Q Consensus 526 ~~~~~~~~~~~~~~~n~~~c~~~ 548 (823)
+..+...++.+|++.|..+
T Consensus 546 ----~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 546 ----FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp ----CSSCCEEEEEEECCCCSSS
T ss_pred ----hCCcCEEEecCCCcccccc
Confidence 3456778899999998554
No 7
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.6e-54 Score=514.08 Aligned_cols=480 Identities=21% Similarity=0.222 Sum_probs=294.8
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|++++..+..|.++++|++|||++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 46888888888888777777888888888888888888888888888888888888888888666667888888888888
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccC--Ccchhhhh
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIG--NLPYLARL 209 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~--~l~~L~~L 209 (823)
++|++++..|..+ +++++|++|+|++|.+++..|..++++++|++|. +..|.+.+..|..++ .+++|++|
T Consensus 105 ~~n~l~~~~~~~~-------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~-L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 105 MSNSIQKIKNNPF-------VKQKNLITLDLSHNGLSSTKLGTQVQLENLQELL-LSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp CSSCCCCCCSCTT-------TTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEE-CCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCccCccChhHc-------cccCCCCEEECCCCcccccCchhhcccccCCEEE-ccCCcccccCHHHhhccccccccEE
Confidence 8888875444444 5556666666666666655555555555555553 444444433333222 22344444
Q ss_pred cccccccc---------------------------------------------------CCccccccCCCC--CcEEEcc
Q 045449 210 ALATNNLV---------------------------------------------------GVVPVTIFNMSA--LKEISLL 236 (823)
Q Consensus 210 ~Ls~N~l~---------------------------------------------------~~~p~~~~~l~~--L~~L~Ls 236 (823)
++++|+++ +..|.+|.+++. |++|+|+
T Consensus 177 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls 256 (680)
T 1ziw_A 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256 (680)
T ss_dssp ECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECT
T ss_pred ECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECC
Confidence 44444443 333444444432 5666666
Q ss_pred CCcccccCCcccccCCCCccEEEeeccccccccCccc---------------------------------cCCCCCCeEE
Q 045449 237 NNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSI---------------------------------TNSSKLSDLE 283 (823)
Q Consensus 237 ~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---------------------------------~~l~~L~~L~ 283 (823)
+|.+++..|..+. .+++|++|+|++|++++..|..| ..+++|++|+
T Consensus 257 ~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 257 YNNLNVVGNDSFA-WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TSCCCEECTTTTT-TCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCcCccCccccc-CcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 6665544433333 35666666666666655444433 3344455555
Q ss_pred eecccccccCCCccCCCcccCcccccCccccCCCCc-----------------------ccccccccCCCCceEEEeecC
Q 045449 284 LGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPE-----------------------LSFLSSLTNCKKLKVLIVTGN 340 (823)
Q Consensus 284 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-----------------------~~~~~~l~~l~~L~~L~Ls~N 340 (823)
+++|++++..+..|..+++|++|++++|.++..... ...+..+.++++|+.|++++|
T Consensus 336 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 415 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLN 415 (680)
T ss_dssp CCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCC
Confidence 555555555555555555555555555543211000 001223444555555555555
Q ss_pred CCCccCC-ccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCC--CCchhcccccCCCCEEEccCCCCCC
Q 045449 341 PLDGILP-KSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLT--GPIPVTFSQLQTLQAFDLTRNKLAG 417 (823)
Q Consensus 341 ~l~~~~p-~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~~ 417 (823)
.+++.+| ..+.++ .+|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..|..+++|++|+|++|++++
T Consensus 416 ~l~~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 494 (680)
T 1ziw_A 416 EIGQELTGQEWRGL-ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN 494 (680)
T ss_dssp CCEEECCSGGGTTC-TTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCC
T ss_pred cCccccCcccccCc-ccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCc
Confidence 5554443 344444 45555555555555555555555555555555555554 4556667777777777777777776
Q ss_pred cchHhhhcCCCCCEEEcccCcCccccc--------ccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 418 PITDELCHLARLHSLVLQGNKFSGSIP--------SCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 418 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++.+.+..|.++++|+.|||++|++++
T Consensus 495 i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 574 (680)
T 1ziw_A 495 INDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNT 574 (680)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCc
Confidence 666667777777777777777765321 236667777777777777776555567777777777777777776
Q ss_pred ccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCCC
Q 045449 490 PLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLP 548 (823)
Q Consensus 490 ~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~ 548 (823)
..+..+..++.|+.|++++|++++..|..+. ..+..+...++.+|++.|+.+
T Consensus 575 l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-------~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 575 LPASVFNNQVSLKSLNLQKNLITSVEKKVFG-------PAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCBCCHHHHH-------HHHTTCSEEECTTCCCCBCCC
T ss_pred CCHhHhCCCCCCCEEECCCCcCCccChhHhc-------ccccccCEEEccCCCcccCCc
Confidence 5555667777777777777777754443321 024567788899999999754
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5e-54 Score=506.80 Aligned_cols=465 Identities=19% Similarity=0.149 Sum_probs=404.6
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|.+++..+..|.++++|++|||++|+|++..|.+|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57999999999999988889999999999999999999988999999999999999999999999999999999999999
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchhhHHHHHhhcCCCcccCCcccCCcchhh---
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLA--- 207 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~--- 207 (823)
++|++++..+..+ +++++|++|+|++|++++ .+|..|+++++|++|. +.+|.+.+..|..++.+++|+
T Consensus 112 ~~n~l~~~~~~~~-------~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~-Ls~n~l~~~~~~~~~~l~~L~~~l 183 (606)
T 3vq2_A 112 VETKLASLESFPI-------GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVD-LSYNYIQTITVNDLQFLRENPQVN 183 (606)
T ss_dssp TTSCCCCSSSSCC-------TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEE-CCSSCCCEECTTTTHHHHHCTTCC
T ss_pred cCCcccccccccc-------CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEE-ccCCcceecChhhhhhhhcccccc
Confidence 9999986554544 889999999999999986 6799999999999986 888888888888888888876
Q ss_pred -hhccccccccCCccccccCCCCCcEEEccCCcccc--------------------------------------------
Q 045449 208 -RLALATNNLVGVVPVTIFNMSALKEISLLNNSLSG-------------------------------------------- 242 (823)
Q Consensus 208 -~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-------------------------------------------- 242 (823)
.|++++|++++..+..+... +|++|++++|.+++
T Consensus 184 ~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~ 262 (606)
T 3vq2_A 184 LSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVT 262 (606)
T ss_dssp CEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSE
T ss_pred ceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhcc
Confidence 69999999987666665544 89999988887642
Q ss_pred --------------cCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 243 --------------SLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 243 --------------~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|.+ +.+| .+ .+++|+.|++
T Consensus 263 l~~l~l~~~~~~~~~~~~--~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l 335 (606)
T 3vq2_A 263 IDEFRLTYTNDFSDDIVK--FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTL 335 (606)
T ss_dssp EEEEEECCCTTCCGGGGS--CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEE
T ss_pred Hhheeccccccccccccc--cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeec
Confidence 2222 223678888888888886 455 788888899999999988 5677 44 8888999999
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCcc--CCccccccccccceEEecCCcceeccCccccCcccccEEEc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGI--LPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLEL 386 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~--~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 386 (823)
++|...+. ..+..+++|+.|++++|.+++. .|..+..+ ++|++|++++|.+++ +|..+..+++|++|++
T Consensus 336 ~~n~~~~~-------~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~-~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l 406 (606)
T 3vq2_A 336 TMNKGSIS-------FKKVALPSLSYLDLSRNALSFSGCCSYSDLGT-NSLRHLDLSFNGAII-MSANFMGLEELQHLDF 406 (606)
T ss_dssp ESCSSCEE-------CCCCCCTTCCEEECCSSCEEEEEECCHHHHCC-SCCCEEECCSCSEEE-ECCCCTTCTTCCEEEC
T ss_pred cCCcCccc-------hhhccCCCCCEEECcCCccCCCcchhhhhccC-CcccEeECCCCcccc-chhhccCCCCCCeeEC
Confidence 88855443 2567899999999999999977 48888888 799999999999986 5688999999999999
Q ss_pred ccCcCCCCch-hcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcc-cccccccCCCCCCeEeccCCccc
Q 045449 387 GGNNLTGPIP-VTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSG-SIPSCLGNLTSVRVLYLGLNIFT 464 (823)
Q Consensus 387 s~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~ 464 (823)
++|++++..| ..+..+++|++|++++|++++..|..+.++++|++|++++|.+++ .+|..++.+++|+.|+|++|+++
T Consensus 407 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 486 (606)
T 3vq2_A 407 QHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLE 486 (606)
T ss_dssp TTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred CCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCC
Confidence 9999998887 689999999999999999999999999999999999999999998 47999999999999999999999
Q ss_pred cccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCccc
Q 045449 465 SVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELL 544 (823)
Q Consensus 465 ~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~ 544 (823)
+.+|..+..+++|+.|++++|++++.+|..+++++.|+.||+++|+++ .+|..+. ..| ..+....+.+|++.
T Consensus 487 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~--~l~-----~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 487 QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQ--HFP-----KSLAFFNLTNNSVA 558 (606)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGG--GSC-----TTCCEEECCSCCCC
T ss_pred ccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHh--hhc-----ccCcEEEccCCCcc
Confidence 999999999999999999999999999999999999999999999999 5665542 122 24677889999999
Q ss_pred CCCCC
Q 045449 545 CGLPD 549 (823)
Q Consensus 545 c~~~~ 549 (823)
|+.+.
T Consensus 559 c~c~~ 563 (606)
T 3vq2_A 559 CICEH 563 (606)
T ss_dssp CSSTT
T ss_pred cCCcc
Confidence 97553
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.9e-54 Score=504.64 Aligned_cols=450 Identities=20% Similarity=0.176 Sum_probs=407.9
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|.+.+..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 47899999999999988999999999999999999999999999999999999999999999888899999999999999
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhH--HHHHhhcCCCcccCCcccCCc------
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLK--EIISTITNSTVCEIPREIGNL------ 203 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~--~L~~l~~n~~~~~ip~~l~~l------ 203 (823)
++|++++..+..+ ..+++|++|+|++|++++..|..|+.+++|+ .|. +.+|.+.+..|..+...
T Consensus 137 ~~n~l~~~~~~~~-------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~-l~~n~l~~~~~~~~~~~~L~~L~ 208 (606)
T 3t6q_A 137 GSNHISSIKLPKG-------FPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN-LNGNDIAGIEPGAFDSAVFQSLN 208 (606)
T ss_dssp CSSCCCCCCCCTT-------CCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEE-CTTCCCCEECTTTTTTCEEEEEE
T ss_pred CCCcccccCcccc-------cCCcccCEEEcccCcccccChhhhhhhcccceeEEe-cCCCccCccChhHhhhccccccc
Confidence 9999986332222 3489999999999999988888899888887 553 77788877766655431
Q ss_pred ---------------------------------------------chhhhhccccccccCCccccccCCCCCcEEEccCC
Q 045449 204 ---------------------------------------------PYLARLALATNNLVGVVPVTIFNMSALKEISLLNN 238 (823)
Q Consensus 204 ---------------------------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 238 (823)
.+|+.|++++|++++..+..|.++++|++|++++|
T Consensus 209 l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 288 (606)
T 3t6q_A 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTAT 288 (606)
T ss_dssp CTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTS
T ss_pred cCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCC
Confidence 16888999999999998889999999999999999
Q ss_pred cccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCC-ccCCCcccCcccccCccccCCC
Q 045449 239 SLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPN-TIGNLRNLEFGNIADNYLTSST 317 (823)
Q Consensus 239 ~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~ 317 (823)
.++ .+|..+.. +++|++|++++|++++..|..+.++++|++|++++|.+.+.+|. .+..+++|++|++++|.+++..
T Consensus 289 ~l~-~lp~~l~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 366 (606)
T 3t6q_A 289 HLS-ELPSGLVG-LSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSD 366 (606)
T ss_dssp CCS-CCCSSCCS-CTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEE
T ss_pred ccC-CCChhhcc-cccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccccc
Confidence 998 89988765 99999999999999998899999999999999999999977665 4999999999999999998762
Q ss_pred CcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCcc-ccCcccccEEEcccCcCCCCch
Q 045449 318 PELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQV-VGNLSNLLVLELGGNNLTGPIP 396 (823)
Q Consensus 318 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~~p 396 (823)
. .+..+.++++|+.|++++|.+.+..|..+..+ ++|++|++++|.+++..|.. +..+++|++|++++|.+++..|
T Consensus 367 ~---~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 442 (606)
T 3t6q_A 367 C---CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC-PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSE 442 (606)
T ss_dssp E---STTTTTTCTTCCEEECCSCSCEEECTTTTTTC-TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCT
T ss_pred C---cchhcccCCCCCEEECCCCcCCcCCHHHhcCC-ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCH
Confidence 1 14578999999999999999999999999998 79999999999999887654 8999999999999999999999
Q ss_pred hcccccCCCCEEEccCCCCCCc---chHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhc
Q 045449 397 VTFSQLQTLQAFDLTRNKLAGP---ITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWN 473 (823)
Q Consensus 397 ~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 473 (823)
..+..+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|..+..
T Consensus 443 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 522 (606)
T 3t6q_A 443 QLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSH 522 (606)
T ss_dssp TTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTT
T ss_pred HHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCc
Confidence 9999999999999999999873 3356899999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCC
Q 045449 474 LKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 474 l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
++.| .||+++|.+++..|..+..++.|+.|++++|++++..+
T Consensus 523 l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 523 LKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999 99999999999999999999999999999999998766
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.1e-51 Score=484.38 Aligned_cols=442 Identities=16% Similarity=0.134 Sum_probs=392.7
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|.+++..|.+|.++++|++|+|++|.|++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 47999999999999988899999999999999999999999999999999999999999999888899999999999999
Q ss_pred ccccccC-ccCccccCCCCCCccccccceeeeccceeeccCccccccchhhH----HHHHhhcCCCcccCCcccCCcchh
Q 045449 132 SINRLSG-ELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLK----EIISTITNSTVCEIPREIGNLPYL 206 (823)
Q Consensus 132 s~N~l~~-~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~~l~~n~~~~~ip~~l~~l~~L 206 (823)
++|++++ .+|..+ +++++|++|+|++|++++..|..|+.+++|+ ++. +..|.+.+..+..+... +|
T Consensus 136 ~~n~l~~~~lp~~~-------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~-l~~n~l~~~~~~~~~~~-~L 206 (606)
T 3vq2_A 136 AHNFIHSCKLPAYF-------SNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLD-MSLNPIDFIQDQAFQGI-KL 206 (606)
T ss_dssp CSSCCCCCCCCGGG-------GTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEE-CTTCCCCEECTTTTTTC-EE
T ss_pred CCCcccceechHhH-------hhcCCCCEEEccCCcceecChhhhhhhhccccccceee-ccCCCcceeCcccccCc-ee
Confidence 9999985 455555 8999999999999999998898899888776 353 66777765555555544 88
Q ss_pred hhhcccccccc----------------------------------------------------------CCccccccCCC
Q 045449 207 ARLALATNNLV----------------------------------------------------------GVVPVTIFNMS 228 (823)
Q Consensus 207 ~~L~Ls~N~l~----------------------------------------------------------~~~p~~~~~l~ 228 (823)
+.|++++|.++ +.+|. +..++
T Consensus 207 ~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~ 285 (606)
T 3vq2_A 207 HELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLA 285 (606)
T ss_dssp EEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGT
T ss_pred eeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCC
Confidence 88888888654 33343 67789
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
+|+.|++++|.++ .+| .+. .+++|++|++++|++ +.+| .+ .+++|++|++++|...+.+ .+..+++|++|++
T Consensus 286 ~L~~L~l~~~~~~-~l~-~l~-~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 357 (606)
T 3vq2_A 286 NVSAMSLAGVSIK-YLE-DVP-KHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDL 357 (606)
T ss_dssp TCSEEEEESCCCC-CCC-CCC-TTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEEC
T ss_pred CCCEEEecCccch-hhh-hcc-ccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEEC
Confidence 9999999999997 677 444 489999999999999 6888 45 9999999999999766544 6789999999999
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccC-ccccCcccccEEEcc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIP-QVVGNLSNLLVLELG 387 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls 387 (823)
++|.+++... .+..+..+++|+.|++++|.+++ +|..+..+ ++|++|++++|++++..| ..+..+++|++|+++
T Consensus 358 s~n~l~~~~~---~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 432 (606)
T 3vq2_A 358 SRNALSFSGC---CSYSDLGTNSLRHLDLSFNGAII-MSANFMGL-EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS 432 (606)
T ss_dssp CSSCEEEEEE---CCHHHHCCSCCCEEECCSCSEEE-ECCCCTTC-TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT
T ss_pred cCCccCCCcc---hhhhhccCCcccEeECCCCcccc-chhhccCC-CCCCeeECCCCccCCccChhhhhccccCCEEECc
Confidence 9999987521 24678899999999999999986 56888888 799999999999999888 789999999999999
Q ss_pred cCcCCCCchhcccccCCCCEEEccCCCCCC-cchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccc
Q 045449 388 GNNLTGPIPVTFSQLQTLQAFDLTRNKLAG-PITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSV 466 (823)
Q Consensus 388 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~ 466 (823)
+|++++.+|..+..+++|++|++++|++++ .+|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++.
T Consensus 433 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 433 YTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp TSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 999999999999999999999999999998 4788899999999999999999999999999999999999999999999
Q ss_pred cchhhhccCCCcEEeccccccccccCccccCCC-CCcEEEcccCCCCCCCCC
Q 045449 467 LSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLK-VVIGLDFSRNNLSGDIPI 517 (823)
Q Consensus 467 ~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~-~L~~L~ls~N~l~g~ip~ 517 (823)
+|..+..+++|+.||+++|+++ .+|..+..++ .|+.|++++|++.+..+.
T Consensus 513 ~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 513 DSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999999999 6777799987 699999999999987664
No 11
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.7e-51 Score=477.62 Aligned_cols=481 Identities=19% Similarity=0.217 Sum_probs=394.5
Q ss_pred CccceeeeeCCC-----------CCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEEC
Q 045449 39 VCIWIGITCDVN-----------SHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDF 107 (823)
Q Consensus 39 ~c~w~gv~c~~~-----------~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 107 (823)
.|.|.|| ||.. ..+++.|+|++|++++..|.++.++++|++|+|++|+|++..|.+|+++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 8743 137899999999999988899999999999999999999988999999999999999
Q ss_pred CCCcCcCCCchhhhcCCCCcEEecccccccCc-cCccccCCCCCCccccccceeeeccceeeccCc-cccccchhhHHHH
Q 045449 108 SDNQLFGSLSSFIFNMSSMTTIDLSINRLSGE-LPANICKIPSTLSKCKQLEELNLGFNNLSGAIP-KEIGNLTKLKEII 185 (823)
Q Consensus 108 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~ 185 (823)
++|++++..|..|+++++|++|+|++|++++. +|. .|+++++|++|++++|++.+.+| ..|.++++|++|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-------~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTS-------LFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSC-------SCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhh-------hhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 99999999999999999999999999999852 333 45899999999999999555555 6899999999886
Q ss_pred HhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccC--CcccccCCCCccEEEeecc
Q 045449 186 STITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSL--PSRIDLSLPNVETLNLGIN 263 (823)
Q Consensus 186 ~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~l--p~~~~~~l~~L~~L~Ls~N 263 (823)
+.+|.+.+.+|..++.+++|++|+++.|.+....+..+..+++|++|++++|.+++.. |..+...+++|+.|++++|
T Consensus 155 -L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 155 -IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp -EEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESC
T ss_pred -ccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccc
Confidence 8889999999999999999999999999987543334457899999999999998632 3334445789999999999
Q ss_pred ccccccCc----cccCCCCCCeEEeecccccccC------CCccCCCcccCcccccCccccCCCCcccccccccCCCCce
Q 045449 264 SFSGTIPS----SITNSSKLSDLELGENLFSGFI------PNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK 333 (823)
Q Consensus 264 ~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 333 (823)
.+++..+. .+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+............+...++|+
T Consensus 234 ~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~ 313 (549)
T 2z81_A 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVK 313 (549)
T ss_dssp EEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCC
T ss_pred ccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccce
Confidence 99875543 4467789999999999988742 2345678889999998888765321111122234467899
Q ss_pred EEEeecCCCCccCCcccc-ccccccceEEecCCcceeccC---ccccCcccccEEEcccCcCCCCch--hcccccCCCCE
Q 045449 334 VLIVTGNPLDGILPKSIG-NFSLSLETILMANCSISGNIP---QVVGNLSNLLVLELGGNNLTGPIP--VTFSQLQTLQA 407 (823)
Q Consensus 334 ~L~Ls~N~l~~~~p~~~~-~~~~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~ 407 (823)
.|++++|.+. .+|..+. .+ ++|++|++++|++++.+| ..++.+++|++|+|++|++++..+ ..+..+++|++
T Consensus 314 ~L~l~~n~l~-~ip~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~ 391 (549)
T 2z81_A 314 RITVENSKVF-LVPCSFSQHL-KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTS 391 (549)
T ss_dssp EEEEESSCCC-CCCHHHHHHC-TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCE
T ss_pred EEEeccCccc-cCCHHHHhcC-ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCE
Confidence 9999999997 5677664 56 799999999999998774 447889999999999999986543 56889999999
Q ss_pred EEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccc
Q 045449 408 FDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFL 487 (823)
Q Consensus 408 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l 487 (823)
|+|++|+++ .+|..+..+++|++|+|++|++++ +|..+. ++|++|+|++|++++.+ ..+++|++|||++|++
T Consensus 392 L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l 463 (549)
T 2z81_A 392 LDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKL 463 (549)
T ss_dssp EECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCC
T ss_pred EECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCcc
Confidence 999999999 678888899999999999999984 454442 68999999999999864 5789999999999999
Q ss_pred ccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCCC
Q 045449 488 DGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLP 548 (823)
Q Consensus 488 ~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~ 548 (823)
+ .+|. ...++.|++||+++|++++.+|..+. .+..+..+++.+|++.|..|
T Consensus 464 ~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~--------~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 464 K-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD--------RLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp S-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG--------GCTTCCEEECCSSCBCCCHH
T ss_pred C-cCCC-cccCccCCEEecCCCccCCcCHHHHh--------cCcccCEEEecCCCccCCCc
Confidence 8 6776 56799999999999999977666553 35567788999999988643
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-51 Score=476.19 Aligned_cols=467 Identities=19% Similarity=0.168 Sum_probs=326.9
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|||++|++++..+.+|.++++|++|||++|+|++..|..|.++++|++|+|++|.+++..|.+|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 47899999999999888889999999999999999999888899999999999999999999988999999999999999
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchhhHHHHHhhcCCCcccCCcccCCcchh----
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYL---- 206 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L---- 206 (823)
++|++++..+.. |+++++|++|+|++|.+++ .+|..|+++++|++|. +.+|.+.+..|..++.+++|
T Consensus 108 ~~n~l~~l~~~~-------~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~-l~~n~l~~~~~~~~~~l~~L~~~~ 179 (570)
T 2z63_A 108 VETNLASLENFP-------IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD-LSSNKIQSIYCTDLRVLHQMPLLN 179 (570)
T ss_dssp TTSCCCCSTTCS-------CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE-CTTSCCCEECGGGGHHHHTCTTCC
T ss_pred cccccccCCCcc-------ccccccccEEecCCCccceecChhhhcccCCCCEEe-CcCCccceecHHHccchhccchhh
Confidence 999998543323 4899999999999999987 4799999999999986 88888888878889988888
Q ss_pred hhhccccccccCCccccccCCCCCcEEEccCCcccc------------------------------cCCcccccCCC--C
Q 045449 207 ARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSG------------------------------SLPSRIDLSLP--N 254 (823)
Q Consensus 207 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g------------------------------~lp~~~~~~l~--~ 254 (823)
+.|++++|.+++..|..+... +|+.|++++|.... .++...+..++ .
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~ 258 (570)
T 2z63_A 180 LSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 258 (570)
T ss_dssp CEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSE
T ss_pred hhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccc
Confidence 889999999998888887766 89999999883221 11111111111 2
Q ss_pred ccEEEeecc-ccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCce
Q 045449 255 VETLNLGIN-SFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK 333 (823)
Q Consensus 255 L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 333 (823)
++.+++++| .+.+.+|..+..+++|++|++++|.++ .+|..+..+ +|+.|++++|.++..+ . ..+++|+
T Consensus 259 l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~------~--~~l~~L~ 328 (570)
T 2z63_A 259 IEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFP------T--LKLKSLK 328 (570)
T ss_dssp EEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCC------B--CBCSSCC
T ss_pred hhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccC------c--ccccccC
Confidence 344555555 556666666666667777777777666 355566666 6667777666666331 1 3455666
Q ss_pred EEEeecCCCCccCCccccccccccceEEecCCcceecc--CccccCcccccEEEcccCcCCCCchhcccccCCCCEEEcc
Q 045449 334 VLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNI--PQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLT 411 (823)
Q Consensus 334 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 411 (823)
.|++++|.+.+..+. ..+ ++|++|++++|++++.. |..+.++++|++|++++|++++..+. +..+++|++|+++
T Consensus 329 ~L~l~~n~~~~~~~~--~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~ 404 (570)
T 2z63_A 329 RLTFTSNKGGNAFSE--VDL-PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQ 404 (570)
T ss_dssp EEEEESCBSCCBCCC--CBC-TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECT
T ss_pred EEeCcCCcccccccc--ccC-CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEcc
Confidence 666666666655544 333 46666666666666543 55556666666666666666643333 6666666666666
Q ss_pred CCCCCCcch-HhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccc-cccchhhhccCCCcEEecccccccc
Q 045449 412 RNKLAGPIT-DELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFT-SVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 412 ~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
+|++++..| ..+.++++|++|++++|.+++.+|..+.++++|++|+|++|.++ +.+|..+..+++|+.|++++|.+++
T Consensus 405 ~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~ 484 (570)
T 2z63_A 405 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 484 (570)
T ss_dssp TSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred CCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCcccc
Confidence 666665544 34556666666666666666666666666666666666666665 4566666666666666666666666
Q ss_pred ccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCCCC
Q 045449 490 PLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLPD 549 (823)
Q Consensus 490 ~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~~ 549 (823)
..|..+..++.|+.|++++|++++.+|..+ ..+..+....+.+|++.|..|.
T Consensus 485 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--------~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 485 LSPTAFNSLSSLQVLNMASNQLKSVPDGIF--------DRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTTT--------TTCTTCCEEECCSSCBCCCTTT
T ss_pred CChhhhhcccCCCEEeCCCCcCCCCCHHHh--------hcccCCcEEEecCCcccCCCcc
Confidence 666666666666666666666664433332 1234455556666666665543
No 13
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.1e-50 Score=480.90 Aligned_cols=446 Identities=21% Similarity=0.211 Sum_probs=301.0
Q ss_pred EEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEeccccc
Q 045449 56 GLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINR 135 (823)
Q Consensus 56 ~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 135 (823)
.+|+++++++ .+|..+. +++++|||++|+|++..+..|.++++|++|||++|.+++..|.+|+++++|++|+|++|+
T Consensus 8 ~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 8 VADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 4666777776 5676664 799999999999998888899999999999999999999999999999999999999999
Q ss_pred ccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhcccccc
Q 045449 136 LSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNN 215 (823)
Q Consensus 136 l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~ 215 (823)
+++..+. .|+++++|++|+|++|++++..|..|+++++|++|. +..|.+.+..|..++++++|++|++++|+
T Consensus 85 l~~l~~~-------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~-Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 156 (680)
T 1ziw_A 85 LSQLSDK-------TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD-LSHNGLSSTKLGTQVQLENLQELLLSNNK 156 (680)
T ss_dssp CCCCCTT-------TTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE-CCSSCCSCCCCCSSSCCTTCCEEECCSSC
T ss_pred cCccChh-------hhccCCCCCEEECCCCccCccChhHccccCCCCEEE-CCCCcccccCchhhcccccCCEEEccCCc
Confidence 9843222 358999999999999999987788999999999996 88999999999999999999999999999
Q ss_pred ccCCcccccc--CCCCCcEEEccCCcccccCCccccc--------------------------CCCCccEEEeecccccc
Q 045449 216 LVGVVPVTIF--NMSALKEISLLNNSLSGSLPSRIDL--------------------------SLPNVETLNLGINSFSG 267 (823)
Q Consensus 216 l~~~~p~~~~--~l~~L~~L~Ls~N~l~g~lp~~~~~--------------------------~l~~L~~L~Ls~N~l~~ 267 (823)
+++..+..+. .+++|++|++++|.+++..|..+.. ..++|+.|++++|++++
T Consensus 157 l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~ 236 (680)
T 1ziw_A 157 IQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLST 236 (680)
T ss_dssp CCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCE
T ss_pred ccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccc
Confidence 9998887664 5689999999999998666543321 12456677777777777
Q ss_pred ccCccccCCCC--CCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcc------------------------c
Q 045449 268 TIPSSITNSSK--LSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPEL------------------------S 321 (823)
Q Consensus 268 ~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~------------------------~ 321 (823)
..|..+.+++. |++|+|++|++++..|..|+.+++|++|++++|++++..+.. .
T Consensus 237 ~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~ 316 (680)
T 1ziw_A 237 TSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLAS 316 (680)
T ss_dssp ECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------
T ss_pred cChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccc
Confidence 77777766644 777777777777777777777777777777777776652210 0
Q ss_pred ccc----cccCCCCceEEEeecCCCCccCCccccccccccceEEecCCccee--ccCccccCc--ccccEEEcccCcCCC
Q 045449 322 FLS----SLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISG--NIPQVVGNL--SNLLVLELGGNNLTG 393 (823)
Q Consensus 322 ~~~----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~--~~p~~~~~l--~~L~~L~Ls~N~l~g 393 (823)
++. .+..+++|+.|++++|.+++..|..|..+ ++|++|++++|.+++ ..+..|..+ ++|+.|++++|++++
T Consensus 317 lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~ 395 (680)
T 1ziw_A 317 LPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISK 395 (680)
T ss_dssp CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCE
T ss_pred ccccChhhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCe
Confidence 111 34445555555555555555555555544 345555444443221 111122221 244444444455554
Q ss_pred CchhcccccCCCCEEEccCCCCCCcch-HhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccc--cccchh
Q 045449 394 PIPVTFSQLQTLQAFDLTRNKLAGPIT-DELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFT--SVLSST 470 (823)
Q Consensus 394 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~ 470 (823)
..|..|..+++|++|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..
T Consensus 396 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~ 475 (680)
T 1ziw_A 396 IESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP 475 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT
T ss_pred EChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc
Confidence 445555555555555555555554433 34555555555555555555555555555555555555555544 344555
Q ss_pred hhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCC
Q 045449 471 IWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSG 513 (823)
Q Consensus 471 ~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 513 (823)
+..+++|+.||+++|.+++..|..+..++.|++|++++|++++
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 518 (680)
T 1ziw_A 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGG
T ss_pred cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccc
Confidence 5555555555555555555444555555555555555555553
No 14
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-50 Score=493.96 Aligned_cols=442 Identities=20% Similarity=0.198 Sum_probs=373.5
Q ss_pred CcEEEEEcCCCCCcccc-CcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchh--hhcCCCCcE
Q 045449 52 HRVIGLNISSFNLQGTI-TPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSF--IFNMSSMTT 128 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~-~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~ 128 (823)
.+++.|||++|...+.+ |.+|.++++|++|+|++|.|++..|..|+++++|++|+|++|.+++.+|.. |.++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 47899999999887777 677999999999999999999999999999999999999999999877665 999999999
Q ss_pred EecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccc--hhhHHHHHhhcCCCcccCCcccCCcch-
Q 045449 129 IDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNL--TKLKEIISTITNSTVCEIPREIGNLPY- 205 (823)
Q Consensus 129 L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~~l~~n~~~~~ip~~l~~l~~- 205 (823)
|||++|.+++..+. ..|+++++|++|+|++|.+++..|..+..+ ++|+.|. +..|.+.+.+|..++.+++
T Consensus 128 L~Ls~N~l~~~~~~------~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~-L~~n~l~~~~~~~~~~~~~~ 200 (844)
T 3j0a_A 128 LDLSKNQIRSLYLH------PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFS-LAANSLYSRVSVDWGKCMNP 200 (844)
T ss_dssp EEEESCCCCCCCCC------GGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCE-ECCSBSCCCCCCCCCSSSCT
T ss_pred EECCCCcccccccc------hhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEE-CCCCccccccccchhhcCCc
Confidence 99999999876443 225899999999999999999999998887 6787775 8888888888888777666
Q ss_pred -----hhhhccccccccCCccccccC--------------------------------------CCCCcEEEccCCcccc
Q 045449 206 -----LARLALATNNLVGVVPVTIFN--------------------------------------MSALKEISLLNNSLSG 242 (823)
Q Consensus 206 -----L~~L~Ls~N~l~~~~p~~~~~--------------------------------------l~~L~~L~Ls~N~l~g 242 (823)
|+.|++++|++++..|..+.. .++|++|+|++|.+++
T Consensus 201 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~ 280 (844)
T 3j0a_A 201 FRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFS 280 (844)
T ss_dssp TTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCE
T ss_pred cccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccc
Confidence 999999999887766654432 2679999999999986
Q ss_pred cCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccc
Q 045449 243 SLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSF 322 (823)
Q Consensus 243 ~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 322 (823)
..|..+. .+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|++++|++++..
T Consensus 281 ~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~----- 354 (844)
T 3j0a_A 281 LNSRVFE-TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ----- 354 (844)
T ss_dssp ECSCCSS-SCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCC-----
T ss_pred cChhhhh-cCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccC-----
Confidence 5555544 5999999999999999888999999999999999999999888999999999999999999998873
Q ss_pred cccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcce--------------------ecc-CccccCcccc
Q 045449 323 LSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSIS--------------------GNI-PQVVGNLSNL 381 (823)
Q Consensus 323 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~--------------------~~~-p~~~~~l~~L 381 (823)
+..|.++++|+.|+|++|.+++... + ++|+.|++++|+++ +.. +..+.++++|
T Consensus 355 ~~~~~~l~~L~~L~Ls~N~l~~i~~-----~-~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L 428 (844)
T 3j0a_A 355 DQTFKFLEKLQTLDLRDNALTTIHF-----I-PSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHL 428 (844)
T ss_dssp SSCSCSCCCCCEEEEETCCSCCCSS-----C-CSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTC
T ss_pred hhhhcCCCCCCEEECCCCCCCcccC-----C-CCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCcc
Confidence 3468888999999999998875321 2 34555555555544 321 1224578999
Q ss_pred cEEEcccCcCCCCchh-cccccCCCCEEEccCCCCC-----CcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCe
Q 045449 382 LVLELGGNNLTGPIPV-TFSQLQTLQAFDLTRNKLA-----GPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRV 455 (823)
Q Consensus 382 ~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 455 (823)
++|+|++|++++..+. .+..+++|++|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|.++++|+.
T Consensus 429 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 508 (844)
T 3j0a_A 429 QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRG 508 (844)
T ss_dssp CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSE
T ss_pred ceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhhe
Confidence 9999999999976544 4667899999999999997 445567889999999999999999999999999999999
Q ss_pred EeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCC
Q 045449 456 LYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPI 517 (823)
Q Consensus 456 L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~ 517 (823)
|+|++|++++.+|..+. ++|+.|||++|++++.+|..+ ..|+.|++++|.+.+.++.
T Consensus 509 L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 509 LSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp EEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred eECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccccc
Confidence 99999999998877766 899999999999999999765 4788999999999987663
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.3e-51 Score=486.74 Aligned_cols=444 Identities=19% Similarity=0.221 Sum_probs=384.6
Q ss_pred CCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcC------cC------CCchhhhcCCCCcEEecccccccCccCcc
Q 045449 76 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQL------FG------SLSSFIFNMSSMTTIDLSINRLSGELPAN 143 (823)
Q Consensus 76 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 143 (823)
.+++.|+|++|.++|.+|++|++|++|++|||++|.+ .| .+|... +..|+ ++++.|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4689999999999999999999999999999999976 33 455544 56778 999999999988876
Q ss_pred ccCC------------CCCCccccccceeeec--cceeeccCccccccchhhHHHHHhhcCCCccc--------------
Q 045449 144 ICKI------------PSTLSKCKQLEELNLG--FNNLSGAIPKEIGNLTKLKEIISTITNSTVCE-------------- 195 (823)
Q Consensus 144 ~~~~------------p~~~~~l~~L~~L~Ls--~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~-------------- 195 (823)
+..+ +-.......++.+++. +|+++| +|.+|+++++|++|. +..|.+.+.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~-Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFY-MGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEE-EESCCCCGGGBSSSCSCTTSHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEE-CcCCccccccccccccccccchh
Confidence 6311 0000122234444443 689999 999999999999996 899999996
Q ss_pred ---CCcccC--CcchhhhhccccccccCCccccccCCCCCcEEEccCCc-ccc-cCCccccc-----CCCCccEEEeecc
Q 045449 196 ---IPREIG--NLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNS-LSG-SLPSRIDL-----SLPNVETLNLGIN 263 (823)
Q Consensus 196 ---ip~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g-~lp~~~~~-----~l~~L~~L~Ls~N 263 (823)
+|..++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+ ++| .+|..++. .+++|++|+|++|
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN 315 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSS
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCC
Confidence 999999 99999999999999999999999999999999999998 998 89988765 1389999999999
Q ss_pred ccccccCc--cccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCC-ceEEEeecC
Q 045449 264 SFSGTIPS--SITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKK-LKVLIVTGN 340 (823)
Q Consensus 264 ~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~-L~~L~Ls~N 340 (823)
+++ .+|. .++++++|++|++++|+++|.+| .|+.+++|++|++++|+++. ++..+..+++ |+.|++++|
T Consensus 316 ~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~------lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 316 NLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE------IPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp CCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEE------CCTTSEEECTTCCEEECCSS
T ss_pred cCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCcccc------ccHhhhhhcccCcEEEccCC
Confidence 999 8998 99999999999999999999999 99999999999999999994 4567899999 999999999
Q ss_pred CCCccCCccccccc-cccceEEecCCcceeccCcccc-------CcccccEEEcccCcCCCCchhcccccCCCCEEEccC
Q 045449 341 PLDGILPKSIGNFS-LSLETILMANCSISGNIPQVVG-------NLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTR 412 (823)
Q Consensus 341 ~l~~~~p~~~~~~~-~~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 412 (823)
.++ .+|..+.... .+|++|++++|.+++.+|..+. .+++|++|+|++|++++..+..+..+++|++|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 999 7888877652 3799999999999999999998 888999999999999954444567799999999999
Q ss_pred CCCCCcchHh-hhcCC-------CCCEEEcccCcCccccccccc--CCCCCCeEeccCCccccccchhhhccCCCcEEec
Q 045449 413 NKLAGPITDE-LCHLA-------RLHSLVLQGNKFSGSIPSCLG--NLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDV 482 (823)
Q Consensus 413 N~l~~~~p~~-~~~l~-------~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 482 (823)
|+++ .+|.. +..+. +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 467 N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 467 NMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp SCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred CCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 9999 55554 33332 8999999999999 7888887 99999999999999999 8999999999999999
Q ss_pred ------cccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCC
Q 045449 483 ------SSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGL 547 (823)
Q Consensus 483 ------s~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~ 547 (823)
++|.+.+.+|..+++++.|+.|++++|++ +.||..+. ..+..+++.+|+..|-.
T Consensus 544 s~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~----------~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 544 RNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT----------PNISVLDIKDNPNISID 603 (636)
T ss_dssp CSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC----------TTCCEEECCSCTTCEEE
T ss_pred CCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh----------CcCCEEECcCCCCcccc
Confidence 56889999999999999999999999999 77886642 46777889999887743
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-49 Score=463.60 Aligned_cols=455 Identities=19% Similarity=0.166 Sum_probs=384.5
Q ss_pred EEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccc
Q 045449 57 LNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRL 136 (823)
Q Consensus 57 L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 136 (823)
++.++.+++ .+|..+. +++++|||++|+|++..+.+|.++++|++|||++|.+++..|..|.++++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444455555 4565443 5799999999999988899999999999999999999998899999999999999999999
Q ss_pred cCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcc-cCCcccCCcchhhhhcccccc
Q 045449 137 SGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVC-EIPREIGNLPYLARLALATNN 215 (823)
Q Consensus 137 ~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~-~ip~~l~~l~~L~~L~Ls~N~ 215 (823)
++..|..| .++++|++|+|++|++++..+..++++++|++|. +.+|.+.+ .+|..|+++++|++|++++|+
T Consensus 89 ~~~~~~~~-------~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~-L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~ 160 (570)
T 2z63_A 89 QSLALGAF-------SGLSSLQKLVAVETNLASLENFPIGHLKTLKELN-VAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (570)
T ss_dssp CEECTTTT-------TTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEE-CCSSCCCCCCCCGGGGGCTTCCEEECTTSC
T ss_pred CccCHhhh-------cCccccccccccccccccCCCccccccccccEEe-cCCCccceecChhhhcccCCCCEEeCcCCc
Confidence 86555544 8999999999999999976666799999999986 78888877 579999999999999999999
Q ss_pred ccCCccccccCCCCC----cEEEccCCcccccCCcccccCCCCccEEEeecccccc-ccC--------------------
Q 045449 216 LVGVVPVTIFNMSAL----KEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSG-TIP-------------------- 270 (823)
Q Consensus 216 l~~~~p~~~~~l~~L----~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~-~~p-------------------- 270 (823)
+++..|..+..+++| ++|++++|.+++..|.. +. ..+|++|++++|.... .+|
T Consensus 161 l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~-~~-~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~ 238 (570)
T 2z63_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR 238 (570)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TT-TCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECC
T ss_pred cceecHHHccchhccchhhhhcccCCCCceecCHHH-hc-cCcceeEecccccccccchhhhhcCccccceeeecccccc
Confidence 999888889988888 89999999999655544 43 3489999999884321 111
Q ss_pred ----------ccccCCC--CCCeEEeecc-cccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEe
Q 045449 271 ----------SSITNSS--KLSDLELGEN-LFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIV 337 (823)
Q Consensus 271 ----------~~~~~l~--~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L 337 (823)
..+..+. .++.+++++| .+.+.+|..+..+++|+.|++++|.++.. +..+..+ +|+.|++
T Consensus 239 ~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l------~~~~~~~-~L~~L~l 311 (570)
T 2z63_A 239 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV------KDFSYNF-GWQHLEL 311 (570)
T ss_dssp CCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSC------CBCCSCC-CCSEEEE
T ss_pred CchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhh------hhhhccC-CccEEee
Confidence 1122222 2456777777 88889999999999999999999999864 4567777 9999999
Q ss_pred ecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCc--hhcccccCCCCEEEccCCCC
Q 045449 338 TGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPI--PVTFSQLQTLQAFDLTRNKL 415 (823)
Q Consensus 338 s~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l 415 (823)
++|.+. .+|. ..+ ++|++|++++|.+.+..+. ..+++|++|++++|++++.. |..+..+++|++|++++|++
T Consensus 312 ~~n~~~-~l~~--~~l-~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l 385 (570)
T 2z63_A 312 VNCKFG-QFPT--LKL-KSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385 (570)
T ss_dssp ESCBCS-SCCB--CBC-SSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSE
T ss_pred ccCccc-ccCc--ccc-cccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcc
Confidence 999998 5565 345 6899999999999887766 78999999999999999754 78899999999999999999
Q ss_pred CCcchHhhhcCCCCCEEEcccCcCccccc-ccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccc-cccCc
Q 045449 416 AGPITDELCHLARLHSLVLQGNKFSGSIP-SCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLD-GPLSL 493 (823)
Q Consensus 416 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~-g~~p~ 493 (823)
++..+. +..+++|+.|++++|.+++..| ..+.++++|++|++++|.+++.+|..+..+++|+.|++++|.++ +.+|.
T Consensus 386 ~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~ 464 (570)
T 2z63_A 386 ITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD 464 (570)
T ss_dssp EEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECS
T ss_pred cccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchh
Confidence 976555 9999999999999999998877 57899999999999999999999999999999999999999998 68999
Q ss_pred cccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCC
Q 045449 494 DIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCG 546 (823)
Q Consensus 494 ~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~ 546 (823)
.+..++.|+.|++++|++++.+|..+. .+..+..+.+.+|....-
T Consensus 465 ~~~~l~~L~~L~l~~n~l~~~~~~~~~--------~l~~L~~L~l~~n~l~~~ 509 (570)
T 2z63_A 465 IFTELRNLTFLDLSQCQLEQLSPTAFN--------SLSSLQVLNMASNQLKSV 509 (570)
T ss_dssp CCTTCTTCCEEECTTSCCCEECTTTTT--------TCTTCCEEECCSSCCSCC
T ss_pred hhhcccCCCEEECCCCccccCChhhhh--------cccCCCEEeCCCCcCCCC
Confidence 999999999999999999976666553 345677778888865443
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-49 Score=457.97 Aligned_cols=454 Identities=20% Similarity=0.195 Sum_probs=363.6
Q ss_pred EEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccc
Q 045449 55 IGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSIN 134 (823)
Q Consensus 55 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 134 (823)
+.||+++|+++ .+|..+. ++|++|||++|+|++..|..|.++++|++|+|++|+|++..|..|+++++|++|||++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 36888999888 5777666 88999999999998877788889999999999999998888888999999999999999
Q ss_pred cccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchhhHHHHHhhcCCCcccCCcccCCcchh--hhhcc
Q 045449 135 RLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYL--ARLAL 211 (823)
Q Consensus 135 ~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L--~~L~L 211 (823)
+++ .+|. . .+++|++|+|++|++++ .+|..|+++++|++|. +.+|.+.+ ..+..+++| ++|++
T Consensus 80 ~l~-~lp~-------~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~-L~~n~l~~---~~~~~l~~L~L~~L~l 145 (520)
T 2z7x_B 80 KLV-KISC-------H--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG-LSTTHLEK---SSVLPIAHLNISKVLL 145 (520)
T ss_dssp CCC-EEEC-------C--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE-EEESSCCG---GGGGGGTTSCEEEEEE
T ss_pred cee-ecCc-------c--ccCCccEEeccCCccccccchhhhccCCcceEEE-ecCcccch---hhccccccceeeEEEe
Confidence 887 3443 2 67889999999999887 5788888888888885 77777766 356667777 99999
Q ss_pred ccccc--cCCccccccCCC-CCcEEEccCCcccccCCcccccCCCCccEEEeeccc-------cccccCccccCCCCCCe
Q 045449 212 ATNNL--VGVVPVTIFNMS-ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINS-------FSGTIPSSITNSSKLSD 281 (823)
Q Consensus 212 s~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~ 281 (823)
++|++ .+..|..+.++. +...+++++|.+.+.++...+..+++|+.|++++|. +.+.+| .+..+++|+.
T Consensus 146 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~ 224 (520)
T 2z7x_B 146 VLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSN 224 (520)
T ss_dssp EECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCE
T ss_pred ecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhh
Confidence 99999 788888887766 455678889998888888777778999999999987 777776 7888999999
Q ss_pred EEeecccccccCCCccC---CCcccCcccccCccccCCCCcccccccc-----cCCCCceEEEeecCCCCccCC-ccccc
Q 045449 282 LELGENLFSGFIPNTIG---NLRNLEFGNIADNYLTSSTPELSFLSSL-----TNCKKLKVLIVTGNPLDGILP-KSIGN 352 (823)
Q Consensus 282 L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 352 (823)
|++++|.+++..+..+. ..++|++|++++|++++. ++..+ ..+++|+.+++++|.+ .+| ..+..
T Consensus 225 L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-----~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~ 297 (520)
T 2z7x_B 225 LTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQ-----LDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYE 297 (520)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESC-----CCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHH
T ss_pred ccccccccCHHHHHHHHHHhhhCcccEEEeecccccCc-----cccchhhcccccCceeEeccccccce--ecchhhhhc
Confidence 99999888764332221 145889999999999876 34455 7889999999999998 455 44443
Q ss_pred cc--cccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCC--cchHhhhcCCC
Q 045449 353 FS--LSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAG--PITDELCHLAR 428 (823)
Q Consensus 353 ~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~ 428 (823)
+. .+|++|++++|.+.... .+..+++|++|++++|++++.+|..+..+++|++|+|++|++++ .+|..+..+++
T Consensus 298 ~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 375 (520)
T 2z7x_B 298 IFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS 375 (520)
T ss_dssp HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTT
T ss_pred ccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCC
Confidence 31 35899999999886532 12678889999999999998888889999999999999999987 56677889999
Q ss_pred CCEEEcccCcCccccccc-ccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcc
Q 045449 429 LHSLVLQGNKFSGSIPSC-LGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFS 507 (823)
Q Consensus 429 L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls 507 (823)
|++|+|++|.+++.+|.. +..+++|+.|+|++|++++.+|..+. ++|+.||+++|.++ .+|..+..++.|+.|+++
T Consensus 376 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~ 452 (520)
T 2z7x_B 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVA 452 (520)
T ss_dssp CCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECC
T ss_pred CCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECC
Confidence 999999999998866654 78888999999999999888777664 78999999999998 788888889999999999
Q ss_pred cCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCC
Q 045449 508 RNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCG 546 (823)
Q Consensus 508 ~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~ 546 (823)
+|+++ .+|... ...+..+....+.+|++.|.
T Consensus 453 ~N~l~-~l~~~~-------~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 453 SNQLK-SVPDGI-------FDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp SSCCC-CCCTTT-------TTTCTTCCEEECCSSCBCCC
T ss_pred CCcCC-ccCHHH-------hccCCcccEEECcCCCCccc
Confidence 99988 455431 12355677788889988775
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.4e-49 Score=472.09 Aligned_cols=428 Identities=16% Similarity=0.205 Sum_probs=355.2
Q ss_pred CCCcEEEccCCCCCCCCCCCCCCCCCCCEEEC-CCCcCcCCCchhh----------------------------------
Q 045449 76 SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDF-SDNQLFGSLSSFI---------------------------------- 120 (823)
Q Consensus 76 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~---------------------------------- 120 (823)
.+++.|+|++|.++|.+|++|++|++|++||| ++|.++|..|...
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 47899999999999999999999999999999 9998887743221
Q ss_pred -----------------hcCCCCcEEeccc--ccccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchh
Q 045449 121 -----------------FNMSSMTTIDLSI--NRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTK 180 (823)
Q Consensus 121 -----------------~~l~~L~~L~Ls~--N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~ 180 (823)
.....++.+.+.. |++++ +|..+ +++++|++|+|++|+|+| .+|..+...
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l-------~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~-- 472 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAI-------QRLTKLQIIYFANSPFTYDNIAVDWEDA-- 472 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGG-------GGCTTCCEEEEESCCCCGGGBSSSCSCT--
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHH-------hcCCCCCEEECcCCcCCCCccccccccc--
Confidence 1111233333333 66665 55544 778888888888888876 333332221
Q ss_pred hHHHHHhhcCCCcccCCcccC--CcchhhhhccccccccCCccccccCCCCCcEEEccCCc-ccc-cCCccccc------
Q 045449 181 LKEIISTITNSTVCEIPREIG--NLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNS-LSG-SLPSRIDL------ 250 (823)
Q Consensus 181 L~~L~~l~~n~~~~~ip~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g-~lp~~~~~------ 250 (823)
..|...+.+|..++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+ ++| .+|..+..
T Consensus 473 -------s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~ 545 (876)
T 4ecn_A 473 -------NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDED 545 (876)
T ss_dssp -------TSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTT
T ss_pred -------ccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhccc
Confidence 12334467899988 99999999999999999999999999999999999998 998 88876543
Q ss_pred CCCCccEEEeeccccccccCc--cccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccC
Q 045449 251 SLPNVETLNLGINSFSGTIPS--SITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTN 328 (823)
Q Consensus 251 ~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 328 (823)
.+++|++|+|++|+++ .+|. .+.++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++. ++..+.+
T Consensus 546 ~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~------lp~~l~~ 616 (876)
T 4ecn_A 546 TGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEE------IPEDFCA 616 (876)
T ss_dssp TTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSC------CCTTSCE
T ss_pred ccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcccc------chHHHhh
Confidence 3459999999999999 8998 9999999999999999999 778 99999999999999999994 4567889
Q ss_pred CCC-ceEEEeecCCCCccCCccccccc-cccceEEecCCcceeccCccc---c--CcccccEEEcccCcCCCCchhc-cc
Q 045449 329 CKK-LKVLIVTGNPLDGILPKSIGNFS-LSLETILMANCSISGNIPQVV---G--NLSNLLVLELGGNNLTGPIPVT-FS 400 (823)
Q Consensus 329 l~~-L~~L~Ls~N~l~~~~p~~~~~~~-~~L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~g~~p~~-~~ 400 (823)
+++ |+.|+|++|.++ .+|..+.... .+|++|++++|++++.+|... . .+++|+.|+|++|+++ .+|.. +.
T Consensus 617 l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~ 694 (876)
T 4ecn_A 617 FTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFA 694 (876)
T ss_dssp ECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHH
T ss_pred ccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHc
Confidence 999 999999999999 7788877662 249999999999998877543 2 3458999999999999 45554 56
Q ss_pred ccCCCCEEEccCCCCCCcchHhhhcC--------CCCCEEEcccCcCccccccccc--CCCCCCeEeccCCccccccchh
Q 045449 401 QLQTLQAFDLTRNKLAGPITDELCHL--------ARLHSLVLQGNKFSGSIPSCLG--NLTSVRVLYLGLNIFTSVLSST 470 (823)
Q Consensus 401 ~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~ 470 (823)
.+++|+.|+|++|+|+ .+|..+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..
T Consensus 695 ~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~ 771 (876)
T 4ecn_A 695 TGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQ 771 (876)
T ss_dssp TTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred cCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchh
Confidence 8999999999999999 566654432 38999999999999 7898887 99999999999999999 7999
Q ss_pred hhccCCCcEEeccc------cccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCccc
Q 045449 471 IWNLKDILFIDVSS------NFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELL 544 (823)
Q Consensus 471 ~~~l~~L~~LdLs~------N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~ 544 (823)
++.+++|+.|+|++ |.+.+.+|..+.+++.|+.|+|++|++ +.||..+. ..+..+++.+|+..
T Consensus 772 l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~----------~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 772 PLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT----------PQLYILDIADNPNI 840 (876)
T ss_dssp GGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC----------SSSCEEECCSCTTC
T ss_pred hhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc----------CCCCEEECCCCCCC
Confidence 99999999999976 889999999999999999999999999 78887652 35677788888765
Q ss_pred C
Q 045449 545 C 545 (823)
Q Consensus 545 c 545 (823)
.
T Consensus 841 ~ 841 (876)
T 4ecn_A 841 S 841 (876)
T ss_dssp E
T ss_pred c
Confidence 4
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-48 Score=449.75 Aligned_cols=436 Identities=19% Similarity=0.223 Sum_probs=375.8
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|+++++|++|||++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 58999999999999888889999999999999999999988999999999999999999998 46665 8999999999
Q ss_pred ccccccC-ccCccccCCCCCCccccccceeeeccceeeccCccccccchhh--HHHHHhhcCCC--cccCCcccCCcc-h
Q 045449 132 SINRLSG-ELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKL--KEIISTITNST--VCEIPREIGNLP-Y 205 (823)
Q Consensus 132 s~N~l~~-~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~~l~~n~~--~~~ip~~l~~l~-~ 205 (823)
++|++++ .+|..+ +++++|++|+|++|++++ ..+..+++| +.|. +..|.+ .+.+|..+..+. .
T Consensus 98 ~~N~l~~~~~p~~~-------~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~-l~~n~l~~~~~~~~~l~~l~~~ 166 (520)
T 2z7x_B 98 SFNAFDALPICKEF-------GNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVL-LVLGETYGEKEDPEGLQDFNTE 166 (520)
T ss_dssp CSSCCSSCCCCGGG-------GGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEE-EEECTTTTSSCCTTTTTTCCEE
T ss_pred cCCccccccchhhh-------ccCCcceEEEecCcccch---hhccccccceeeEEE-eecccccccccccccccccccc
Confidence 9999986 455555 899999999999999986 356667777 7775 888888 788899988876 3
Q ss_pred hhhhccccccccCCccc-cccCCCCCcEEEccCCc-------ccccCCcccccCCCCccEEEeeccccccccCcccc---
Q 045449 206 LARLALATNNLVGVVPV-TIFNMSALKEISLLNNS-------LSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSIT--- 274 (823)
Q Consensus 206 L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--- 274 (823)
...+++++|++.+.++. .+.++++|+.|++++|. +.+.+| .+. .+++|+.|++++|.+++..+..+.
T Consensus 167 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~-~l~~L~~L~l~~~~l~~~~~~~~~~~~ 244 (520)
T 2z7x_B 167 SLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQ-TNPKLSNLTLNNIETTWNSFIRILQLV 244 (520)
T ss_dssp EEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGG-GCTTCCEEEEEEEEEEHHHHHHHHHHH
T ss_pred eEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhc-cccchhhccccccccCHHHHHHHHHHh
Confidence 45678999998877665 66789999999999998 777776 444 499999999999998865433322
Q ss_pred CCCCCCeEEeecccccccCCCcc-----CCCcccCcccccCccccCCCCcccccccccCC---CCceEEEeecCCCCccC
Q 045449 275 NSSKLSDLELGENLFSGFIPNTI-----GNLRNLEFGNIADNYLTSSTPELSFLSSLTNC---KKLKVLIVTGNPLDGIL 346 (823)
Q Consensus 275 ~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~ 346 (823)
..++|++|++++|+++|.+|..+ +.+++|+.+++++|.+ ..+. ..+..+ .+|+.|++++|.+.+..
T Consensus 245 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~-----~~~~~~~~~~~L~~L~l~~n~l~~~~ 318 (520)
T 2z7x_B 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQ-----SYIYEIFSNMNIKNFTVSGTRMVHML 318 (520)
T ss_dssp HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCT-----HHHHHHHHTCCCSEEEEESSCCCCCC
T ss_pred hhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecch-----hhhhcccccCceeEEEcCCCcccccc
Confidence 24689999999999999999998 9999999999999999 3221 233333 67999999999987543
Q ss_pred CccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCC--CchhcccccCCCCEEEccCCCCCCcchHh-h
Q 045449 347 PKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTG--PIPVTFSQLQTLQAFDLTRNKLAGPITDE-L 423 (823)
Q Consensus 347 p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~ 423 (823)
- +..+ ++|++|++++|++++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +
T Consensus 319 ~--~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~ 395 (520)
T 2z7x_B 319 C--PSKI-SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395 (520)
T ss_dssp C--CSSC-CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSC
T ss_pred c--hhhC-CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchh
Confidence 1 1345 789999999999999999999999999999999999997 56788999999999999999999866765 8
Q ss_pred hcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCcc-ccCCCCCc
Q 045449 424 CHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLD-IGNLKVVI 502 (823)
Q Consensus 424 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~-~~~l~~L~ 502 (823)
..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ .+|.. +..++.|+
T Consensus 396 ~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 396 SWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQ 471 (520)
T ss_dssp CCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred ccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCccc
Confidence 8899999999999999999888775 79999999999999 58888889999999999999999 46665 99999999
Q ss_pred EEEcccCCCCCCCC
Q 045449 503 GLDFSRNNLSGDIP 516 (823)
Q Consensus 503 ~L~ls~N~l~g~ip 516 (823)
.|++++|++++.++
T Consensus 472 ~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 472 KIWLHTNPWDCSCP 485 (520)
T ss_dssp EEECCSSCBCCCHH
T ss_pred EEECcCCCCcccCC
Confidence 99999999998765
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-46 Score=436.43 Aligned_cols=464 Identities=21% Similarity=0.200 Sum_probs=386.8
Q ss_pred eeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCC
Q 045449 46 TCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSS 125 (823)
Q Consensus 46 ~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 125 (823)
.|.. ..+ .|+++++++ .+|+.+. ++|++|||++|+|++..|..|.++++|++|+|++|+|++..|.+|+++++
T Consensus 3 ~C~~--~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 3 SCDA--SGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp EECT--TSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCC--Cce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 5753 223 799999998 6777664 79999999999999999999999999999999999999999999999999
Q ss_pred CcEEecccccccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchhhHHHHHhhcCCCcccCC-cccCCc
Q 045449 126 MTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTKLKEIISTITNSTVCEIP-REIGNL 203 (823)
Q Consensus 126 L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~~l~~n~~~~~ip-~~l~~l 203 (823)
|++|||++|++++..|..+ +++++|++|+|++|++++ .+|..++++++|++|. +..|...+.+| ..|.++
T Consensus 76 L~~L~Ls~n~l~~~~~~~~-------~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~-L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWF-------GPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR-IGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp CCEEECTTSCCCSCCHHHH-------TTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE-EEESSSCCEECTTTTTTC
T ss_pred CCEEECCCCccCccCHHHh-------ccCCCCcEEECCCCcccccchhhhhhccCCccEEE-CCCCccccccCHhhhhcc
Confidence 9999999999997665555 889999999999999987 4678899999999986 78888777776 689999
Q ss_pred chhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeecccccccc--C-ccccCCCCCC
Q 045449 204 PYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTI--P-SSITNSSKLS 280 (823)
Q Consensus 204 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~ 280 (823)
++|++|++++|++++..|..+.++++|++|+++.|.++ .+|..+...+++|++|++++|++++.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 99999999999999999999999999999999999986 677776666999999999999999752 2 2234578999
Q ss_pred eEEeecccccccCC----CccCCCcccCcccccCccccCCCCcc-cccccccCCCCceEEEeecCCCCcc-----CCccc
Q 045449 281 DLELGENLFSGFIP----NTIGNLRNLEFGNIADNYLTSSTPEL-SFLSSLTNCKKLKVLIVTGNPLDGI-----LPKSI 350 (823)
Q Consensus 281 ~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~ 350 (823)
.|++++|.+++..+ ..+..+++|+.+++++|.+.+..... .....+..+.+|+.|++.++.+... ++..+
T Consensus 227 ~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~ 306 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVY 306 (549)
T ss_dssp EEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHH
T ss_pred ceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhh
Confidence 99999999987644 34567889999999999998753210 0123456788999999999987643 12212
Q ss_pred cccccccceEEecCCcceeccCccc-cCcccccEEEcccCcCCCCchh---cccccCCCCEEEccCCCCCCcch--Hhhh
Q 045449 351 GNFSLSLETILMANCSISGNIPQVV-GNLSNLLVLELGGNNLTGPIPV---TFSQLQTLQAFDLTRNKLAGPIT--DELC 424 (823)
Q Consensus 351 ~~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~Ls~N~l~~~~p--~~~~ 424 (823)
... .+|++|++++|.++ .+|..+ ..+++|++|+|++|++++.+|. .++.+++|++|+|++|++++..+ ..+.
T Consensus 307 ~~~-~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 384 (549)
T 2z81_A 307 SLL-EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILL 384 (549)
T ss_dssp HHS-TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGG
T ss_pred hhc-ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhh
Confidence 222 68999999999998 566655 6799999999999999987754 47889999999999999997643 5689
Q ss_pred cCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEE
Q 045449 425 HLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGL 504 (823)
Q Consensus 425 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L 504 (823)
.+++|++|+|++|+++ .+|..+..+++|++|+|++|.+++. |..+ .++|++||+++|++++.+ ..++.|+.|
T Consensus 385 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L 456 (549)
T 2z81_A 385 TLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQEL 456 (549)
T ss_dssp GCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEE
T ss_pred cCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceEEECCCCChhhhc----ccCChhcEE
Confidence 9999999999999999 6899999999999999999999863 4333 268999999999999864 578999999
Q ss_pred EcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccC
Q 045449 505 DFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLC 545 (823)
Q Consensus 505 ~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c 545 (823)
++++|+++ .||.. ..+..+..+++.+|....
T Consensus 457 ~Ls~N~l~-~ip~~---------~~l~~L~~L~Ls~N~l~~ 487 (549)
T 2z81_A 457 YISRNKLK-TLPDA---------SLFPVLLVMKISRNQLKS 487 (549)
T ss_dssp ECCSSCCS-SCCCG---------GGCTTCCEEECCSSCCCC
T ss_pred ECCCCccC-cCCCc---------ccCccCCEEecCCCccCC
Confidence 99999999 55542 235567788888886654
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.2e-45 Score=433.69 Aligned_cols=465 Identities=19% Similarity=0.172 Sum_probs=366.8
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
..++.|||++|+|++..+.+|.++++|++|||++|+|+++.|++|.++++|++|+|++|+|++..+.+|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999887889999999999999999999888889999999999999999999888899999999999999
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchhhHHHHHhhcCCCcccCCcccCCcchhh---
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLA--- 207 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~--- 207 (823)
++|++++..+.. |+++++|++|+|++|++++ .+|..++.+++|++|. +..|.+.+..|..|..+.++.
T Consensus 132 s~N~l~~l~~~~-------~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~-L~~N~l~~~~~~~l~~L~~l~~~~ 203 (635)
T 4g8a_A 132 VETNLASLENFP-------IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD-LSSNKIQSIYCTDLRVLHQMPLLN 203 (635)
T ss_dssp TTSCCCCSTTCC-------CTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE-CCSSCCCEECGGGGHHHHTCTTCC
T ss_pred CCCcCCCCChhh-------hhcCcccCeeccccCccccCCCchhhccchhhhhhc-ccCccccccccccccchhhhhhhh
Confidence 999998544433 4899999999999999975 4688889999999885 888888888888887776655
Q ss_pred -hhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccC-----------------------------------
Q 045449 208 -RLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLS----------------------------------- 251 (823)
Q Consensus 208 -~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~----------------------------------- 251 (823)
.++++.|.++...+..+. ...+..+++++|..+..++...+..
T Consensus 204 ~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~ 282 (635)
T 4g8a_A 204 LSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLT 282 (635)
T ss_dssp CEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSE
T ss_pred hhhhcccCcccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchh
Confidence 467888888866555443 3456667777765432222211111
Q ss_pred ----------------------CCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCccccc
Q 045449 252 ----------------------LPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIA 309 (823)
Q Consensus 252 ----------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 309 (823)
+.+++.+++..|.+.... .+....+|+.|++++|.+.+..+. .+..|+.+++.
T Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~ 357 (635)
T 4g8a_A 283 IEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFT 357 (635)
T ss_dssp EEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEE
T ss_pred hhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccc
Confidence 223444444444443221 233444566666666666544332 33455556666
Q ss_pred CccccCCCCcccccccccCCCCceEEEeecCCCCc--cCCccccccccccceEEecCCcceeccCccccCcccccEEEcc
Q 045449 310 DNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDG--ILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELG 387 (823)
Q Consensus 310 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 387 (823)
.|.+... .....+++|+.|++++|.+.. ..+..+... .+|++++++.|.+.. .+..+..+++|+.++++
T Consensus 358 ~n~~~~~-------~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~-~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~ 428 (635)
T 4g8a_A 358 SNKGGNA-------FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGT-ISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQ 428 (635)
T ss_dssp SCCSCCB-------CCCCBCTTCCEEECCSSCCBEEEECCHHHHSC-SCCCEEECCSCSEEE-ECSCCTTCTTCCEEECT
T ss_pred cccCCCC-------cccccccccccchhhccccccccccccchhhh-hhhhhhhcccccccc-ccccccccccccchhhh
Confidence 6655443 234568899999999999864 355566666 689999999998875 45668889999999999
Q ss_pred cCcCCCCch-hcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcC-cccccccccCCCCCCeEeccCCcccc
Q 045449 388 GNNLTGPIP-VTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKF-SGSIPSCLGNLTSVRVLYLGLNIFTS 465 (823)
Q Consensus 388 ~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~g~~p~~~~~l~~L~~L~Ls~N~l~~ 465 (823)
.|+.....+ ..|..+.+++.+++++|.+++..+..+..++.|+.|+|++|.+ .+.+|..|..+++|++|+|++|++++
T Consensus 429 ~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~ 508 (635)
T 4g8a_A 429 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 508 (635)
T ss_dssp TSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred hccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCC
Confidence 998876654 4578999999999999999999999999999999999999985 55678899999999999999999999
Q ss_pred ccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccC
Q 045449 466 VLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLC 545 (823)
Q Consensus 466 ~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c 545 (823)
.+|..|.++++|++|+|++|+|++..|..+..++.|++|||++|+|++.+|..+. .. ..++..+.+.+|++.|
T Consensus 509 l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~l-----~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 509 LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ--HF-----PSSLAFLNLTQNDFAC 581 (635)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTT--CC-----CTTCCEEECTTCCBCC
T ss_pred cChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHH--hh-----hCcCCEEEeeCCCCcc
Confidence 9999999999999999999999999999999999999999999999988777663 11 1456778899999999
Q ss_pred C
Q 045449 546 G 546 (823)
Q Consensus 546 ~ 546 (823)
+
T Consensus 582 ~ 582 (635)
T 4g8a_A 582 T 582 (635)
T ss_dssp S
T ss_pred c
Confidence 6
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.3e-46 Score=433.85 Aligned_cols=460 Identities=19% Similarity=0.195 Sum_probs=310.6
Q ss_pred EEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccc
Q 045449 55 IGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSIN 134 (823)
Q Consensus 55 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 134 (823)
+.+|++++++++ +|..+. ++|++|||++|+|++..|..|.++++|++|+|++|+|++..|.+|.++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 689999999995 776664 78999999999999888889999999999999999999888999999999999999999
Q ss_pred cccCccCccccCCCCCCccccccceeeeccceeec-cCccccccchhhHHHHHhhcCCCcccCCcccCCcchh--hhhcc
Q 045449 135 RLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG-AIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYL--ARLAL 211 (823)
Q Consensus 135 ~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L--~~L~L 211 (823)
+++ .+|. . .+++|++|+|++|++++ .+|..|+++++|++|. +..|.+.+. .+..+++| ++|++
T Consensus 111 ~l~-~lp~-------~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~-L~~n~l~~~---~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 111 RLQ-NISC-------C--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG-LSAAKFRQL---DLLPVAHLHLSCILL 176 (562)
T ss_dssp CCC-EECS-------C--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEE-EECSBCCTT---TTGGGTTSCEEEEEE
T ss_pred cCC-ccCc-------c--ccccCCEEECCCCCccccCchHhhcccCcccEEe-cCCCccccC---chhhhhhceeeEEEe
Confidence 987 4443 2 68899999999999986 4578899999999885 777777653 34445555 99999
Q ss_pred ccccc--cCCccccccCCC-CCcEEEccCCcccccCCcccccCCCCccEEEeeccc-----cccccCccccCCCCCCeEE
Q 045449 212 ATNNL--VGVVPVTIFNMS-ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINS-----FSGTIPSSITNSSKLSDLE 283 (823)
Q Consensus 212 s~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~ 283 (823)
++|++ ++..|..+.+++ +.-.++++.|.+.+.++......+++|+.|++++|+ +.+. ...+..+++|+.|+
T Consensus 177 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~ 255 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVT 255 (562)
T ss_dssp EESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEE
T ss_pred ecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEE
Confidence 99999 888888887765 223668888888887877777678888888888884 2222 23456666677676
Q ss_pred eecccccccC----CCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCC-cccccc--ccc
Q 045449 284 LGENLFSGFI----PNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILP-KSIGNF--SLS 356 (823)
Q Consensus 284 Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~--~~~ 356 (823)
++++.+++.. +..+ ..++|++|++++|.+++..+...+.....+++.|+.++++.|.+ .+| .++..+ ..+
T Consensus 256 L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~ 332 (562)
T 3a79_B 256 LQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMN 332 (562)
T ss_dssp EEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCC
T ss_pred ecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCc
Confidence 6666655321 1111 12367777777777765522210001115566666666666666 334 222211 024
Q ss_pred cceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCC--cchHhhhcCCCCCEEEc
Q 045449 357 LETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAG--PITDELCHLARLHSLVL 434 (823)
Q Consensus 357 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L 434 (823)
|++|++++|.+.... ....+++|++|++++|++++.+|..+..+++|++|+|++|++++ .+|..|.++++|+.|+|
T Consensus 333 L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l 410 (562)
T 3a79_B 333 IKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDV 410 (562)
T ss_dssp CSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEEC
T ss_pred ceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEEC
Confidence 666777766664321 11456666777777777766666666666777777777777665 23455666667777777
Q ss_pred ccCcCcccccc-cccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCC
Q 045449 435 QGNKFSGSIPS-CLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSG 513 (823)
Q Consensus 435 s~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 513 (823)
++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|||++|+++ .+|..+..++.|+.|++++|+++
T Consensus 411 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~- 486 (562)
T 3a79_B 411 SLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK- 486 (562)
T ss_dssp TTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-
T ss_pred CCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-
Confidence 77776664443 366666677777777776665555443 56667777777666 56665556667777777777666
Q ss_pred CCCCcccCccCCCCCCCCCCCcccccCCcccCCCC
Q 045449 514 DIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLP 548 (823)
Q Consensus 514 ~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~ 548 (823)
.+|... ...+..+....+.+|++.|..+
T Consensus 487 ~l~~~~-------~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 487 SVPDGV-------FDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCTTS-------TTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCHHH-------HhcCCCCCEEEecCCCcCCCcc
Confidence 344330 1223445556666676666544
No 23
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.3e-45 Score=397.08 Aligned_cols=296 Identities=31% Similarity=0.495 Sum_probs=261.4
Q ss_pred cchHHHHHHHHHHHHhccCCCccccccccCCCCCCcc--ceeeeeCCCC--CcEEEEEcCCCCCcc--ccCcccCCCCCC
Q 045449 5 SIISQHQQALLALKAHISYDHTNLFARNWTSSTSVCI--WIGITCDVNS--HRVIGLNISSFNLQG--TITPQLGNLSSL 78 (823)
Q Consensus 5 ~~~~~~~~aLl~~k~~~~~~~~~~~~~~W~~~~~~c~--w~gv~c~~~~--~~v~~L~L~~~~l~g--~~~~~l~~l~~L 78 (823)
.|.++|++||++||+++. ||. .++ +|..+.|||. |.||+|+..+ ++|+.|+|++++++| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~-~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLS-SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGT-TCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-ccc-CCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 589999999999999984 665 566 9988889999 9999998765 899999999999999 999999999999
Q ss_pred cEEEccC-CCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCcccccc
Q 045449 79 QTLDLSH-NKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQL 157 (823)
Q Consensus 79 ~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L 157 (823)
++|+|++ |++.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|++++.+|..+ ..+++|
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------~~l~~L 151 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI-------SSLPNL 151 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGG-------GGCTTC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHH-------hcCCCC
Confidence 9999995 99999999999999999999999999999999999999999999999999998887766 889999
Q ss_pred ceeeeccceeeccCccccccch-hhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCcEEEcc
Q 045449 158 EELNLGFNNLSGAIPKEIGNLT-KLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLL 236 (823)
Q Consensus 158 ~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 236 (823)
++|+|++|++++.+|..++.++ +|++|. +..|.+.+.+|..+..++ |++|+|++|++++..|..|.++++|++|+|+
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~-L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMT-ISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEE-CCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEE-CcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 9999999999999999998887 787775 778888888888888887 8888888888888888888888888888888
Q ss_pred CCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCcc-ccC
Q 045449 237 NNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNY-LTS 315 (823)
Q Consensus 237 ~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 315 (823)
+|.+++.+|. +. .+++|++|+|++|++++.+|..+..+++|++|+|++|+++|.+|.. ..+++|+.|++++|. +.|
T Consensus 230 ~N~l~~~~~~-~~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 230 KNSLAFDLGK-VG-LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp SSEECCBGGG-CC-CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred CCceeeecCc-cc-ccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 8888866665 33 4788888888888888888888888888888888888888888876 788888888888887 444
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.7e-44 Score=410.04 Aligned_cols=393 Identities=18% Similarity=0.191 Sum_probs=263.7
Q ss_pred CCcccee--eeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCC
Q 045449 38 SVCIWIG--ITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGS 115 (823)
Q Consensus 38 ~~c~w~g--v~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~ 115 (823)
+.|.|.+ |.|+. ++++ .+|. + .++|++|||++|+|++..|..|+++++|++|+|++|.+.+.
T Consensus 6 ~~c~~~~~~~~c~~------------~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~ 69 (455)
T 3v47_A 6 SECSVIGYNAICIN------------RGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69 (455)
T ss_dssp -CCEEETTEEECCS------------SCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE
T ss_pred ceeEEEccccCcCC------------CCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce
Confidence 4577766 66653 2333 3444 2 26788888888888887788888888888888888888755
Q ss_pred C-chhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcc
Q 045449 116 L-SSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVC 194 (823)
Q Consensus 116 ~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~ 194 (823)
+ +..|.++++|++|+|++|++++..|..+ +++++|++|+|++|++++.+|..
T Consensus 70 i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-------~~l~~L~~L~L~~n~l~~~~~~~-------------------- 122 (455)
T 3v47_A 70 IRNNTFRGLSSLIILKLDYNQFLQLETGAF-------NGLANLEVLTLTQCNLDGAVLSG-------------------- 122 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTCTTCEECTTTT-------TTCTTCCEEECTTSCCBTHHHHS--------------------
T ss_pred ECcccccccccCCEEeCCCCccCccChhhc-------cCcccCCEEeCCCCCCCccccCc--------------------
Confidence 5 5678888888888888888876655544 77888888888888887543321
Q ss_pred cCCcccCCcchhhhhccccccccCCcccc-ccCCCCCcEEEccCCcccccCCccccc-CCCCccEEEeeccccccccCcc
Q 045449 195 EIPREIGNLPYLARLALATNNLVGVVPVT-IFNMSALKEISLLNNSLSGSLPSRIDL-SLPNVETLNLGINSFSGTIPSS 272 (823)
Q Consensus 195 ~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~lp~~~~~-~l~~L~~L~Ls~N~l~~~~p~~ 272 (823)
..+.++++|++|+|++|++++..|.. +.++++|++|++++|.+++..|..+.. ...+|+.|++++|.+.+..+..
T Consensus 123 ---~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~ 199 (455)
T 3v47_A 123 ---NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYW 199 (455)
T ss_dssp ---STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTC
T ss_pred ---ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhh
Confidence 22556667788888888888877766 778888888888888888666655543 1257778888888777554433
Q ss_pred c--------cCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCc
Q 045449 273 I--------TNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDG 344 (823)
Q Consensus 273 ~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 344 (823)
+ ..+++|++|++++|++++.+|..+..+ ...++|+.|++++|.+.+
T Consensus 200 ~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~--------------------------~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 200 LGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDA--------------------------IAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp TTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHH--------------------------TTTCCEEEEECTTCTTTS
T ss_pred ccccccccccccceeeeEecCCCcccccchhhhhcc--------------------------ccccceeeEeeccccccc
Confidence 2 244566666666666666555544332 011344444444444332
Q ss_pred cCCccccccccccceEEecCCcceeccCccccC--cccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHh
Q 045449 345 ILPKSIGNFSLSLETILMANCSISGNIPQVVGN--LSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDE 422 (823)
Q Consensus 345 ~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 422 (823)
... ..+.+.+..+..+.. .++|++|++++|++++.+|..|..+++|++|+|++|++++..|..
T Consensus 254 ~~~---------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 318 (455)
T 3v47_A 254 SSF---------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA 318 (455)
T ss_dssp CCT---------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred ccc---------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhH
Confidence 210 011111122222222 246677777777777666666777777777777777777666666
Q ss_pred hhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCc
Q 045449 423 LCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVI 502 (823)
Q Consensus 423 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~ 502 (823)
|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..++.|+
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 398 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQ 398 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCccc
Confidence 77777777777777777766677777777777777777777777777777777777777777777766566667778888
Q ss_pred EEEcccCCCCCCCCC
Q 045449 503 GLDFSRNNLSGDIPI 517 (823)
Q Consensus 503 ~L~ls~N~l~g~ip~ 517 (823)
.|++++|+++|.+|.
T Consensus 399 ~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 399 KIWLHTNPWDCSCPR 413 (455)
T ss_dssp EEECCSSCBCCCTTT
T ss_pred EEEccCCCcccCCCc
Confidence 888888888877763
No 25
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-43 Score=402.72 Aligned_cols=393 Identities=18% Similarity=0.215 Sum_probs=294.1
Q ss_pred cEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccc
Q 045449 79 QTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLE 158 (823)
Q Consensus 79 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~ 158 (823)
+.++.+++.++ .+|. + .++|++|||++|.|++..|..|+++++|++|+|++|.+.+.++.. .|.++++|+
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~------~~~~l~~L~ 82 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNN------TFRGLSSLI 82 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTT------TTTTCTTCC
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcc------cccccccCC
Confidence 46788888887 5665 3 278999999999999888999999999999999999887665432 257888899
Q ss_pred eeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCcccc--ccCCCCCcEEEcc
Q 045449 159 ELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVT--IFNMSALKEISLL 236 (823)
Q Consensus 159 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls 236 (823)
+|+|++|++++..|.. |+++++|++|+|++|++++..|.. |.++++|++|+|+
T Consensus 83 ~L~Ls~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~ 137 (455)
T 3v47_A 83 ILKLDYNQFLQLETGA-------------------------FNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137 (455)
T ss_dssp EEECTTCTTCEECTTT-------------------------TTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECC
T ss_pred EEeCCCCccCccChhh-------------------------ccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECC
Confidence 9999888887554433 344455667777777777654443 6666666666666
Q ss_pred CCcccccCCcccccCCCCccEEEeeccccccccCccccCC--CCCCeEEeecccccccCCCccCCCcccCcccccCcccc
Q 045449 237 NNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNS--SKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLT 314 (823)
Q Consensus 237 ~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 314 (823)
+|.+++..|..++..+++|++|+|++|++++..|..+..+ .+|+.|++++|.+.+..+..++
T Consensus 138 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~---------------- 201 (455)
T 3v47_A 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG---------------- 201 (455)
T ss_dssp SSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT----------------
T ss_pred CCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcc----------------
Confidence 6666655555433346666666666666665555555544 3455555555555543322211
Q ss_pred CCCCcccccccccCCCCceEEEeecCCCCccCCccccccc--cccceEEecCCcceeccCccccCcccccEEEcccCcCC
Q 045449 315 SSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFS--LSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLT 392 (823)
Q Consensus 315 ~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 392 (823)
......+..+++|+.|++++|.+++..|..+.... .+|+.|++++|.+.+.. +..+.+.
T Consensus 202 -----~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~ 262 (455)
T 3v47_A 202 -----WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFK 262 (455)
T ss_dssp -----HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSC
T ss_pred -----ccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhc
Confidence 00122345668899999999999988887775431 46788888887765431 2334444
Q ss_pred CCchhccccc--CCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchh
Q 045449 393 GPIPVTFSQL--QTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSST 470 (823)
Q Consensus 393 g~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 470 (823)
+..+..+..+ ++|++|++++|++++.+|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..
T Consensus 263 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 342 (455)
T 3v47_A 263 DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM 342 (455)
T ss_dssp CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG
T ss_pred cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhH
Confidence 4444445443 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCCCC
Q 045449 471 IWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLPD 549 (823)
Q Consensus 471 ~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~~ 549 (823)
+..+++|+.|||++|.+++..|..+..++.|++|++++|++++..+..+ ..+..+..+.+.+|++.|..|.
T Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--------~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIF--------DRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTT--------TTCTTCCEEECCSSCBCCCTTT
T ss_pred hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHh--------ccCCcccEEEccCCCcccCCCc
Confidence 9999999999999999999999999999999999999999995333222 2356788889999999999874
No 26
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.5e-44 Score=416.79 Aligned_cols=438 Identities=20% Similarity=0.199 Sum_probs=361.0
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|.+++..+.+|.++++|++|+|++|+|++..|..|.++++|++|||++|+|+ .+|.. .+++|++|||
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57899999999999888889999999999999999999999999999999999999999998 45655 8999999999
Q ss_pred ccccccC-ccCccccCCCCCCccccccceeeeccceeeccCccccccchhh--HHHHHhhcCCC--cccCCcccCCcc--
Q 045449 132 SINRLSG-ELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKL--KEIISTITNST--VCEIPREIGNLP-- 204 (823)
Q Consensus 132 s~N~l~~-~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L--~~L~~l~~n~~--~~~ip~~l~~l~-- 204 (823)
++|++++ .+|.. |+++++|++|+|++|++++. .+..+++| ++|. +..|.+ .+..|..+..+.
T Consensus 129 s~N~l~~l~~p~~-------~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~-L~~n~l~~~~~~~~~l~~l~~~ 197 (562)
T 3a79_B 129 SFNDFDVLPVCKE-------FGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCIL-LDLVSYHIKGGETESLQIPNTT 197 (562)
T ss_dssp CSSCCSBCCCCGG-------GGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEE-EEESSCCCCSSSCCEEEECCEE
T ss_pred CCCCccccCchHh-------hcccCcccEEecCCCccccC---chhhhhhceeeEEE-eecccccccccCcccccccCcc
Confidence 9999985 33444 48999999999999999864 44555555 7775 888888 888888888765
Q ss_pred hhhhhccccccccCCccc-cccCCCCCcEEEccCCc-----ccccCCcccccCCCCccEEEeecccccccc----Ccccc
Q 045449 205 YLARLALATNNLVGVVPV-TIFNMSALKEISLLNNS-----LSGSLPSRIDLSLPNVETLNLGINSFSGTI----PSSIT 274 (823)
Q Consensus 205 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-----l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~ 274 (823)
.+ .++++.|.+.+.++. .+.++++|+.|++++|. +.+.++ .+. .+++|+.|+|+++.+++.. +..+
T Consensus 198 ~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~-~l~-~l~~L~~L~L~~~~l~~~~~~~~~~~~- 273 (562)
T 3a79_B 198 VL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLS-ELT-RGPTLLNVTLQHIETTWKCSVKLFQFF- 273 (562)
T ss_dssp EE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHH-HHH-SCSSCEEEEEEEEEECHHHHHHHHHHH-
T ss_pred eE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHH-HHh-ccCcceEEEecCCcCcHHHHHHHHHhh-
Confidence 34 568999999887665 45678999999999995 333222 233 4889999999888776432 2222
Q ss_pred CCCCCCeEEeecccccccCCCcc-----CCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCcc
Q 045449 275 NSSKLSDLELGENLFSGFIPNTI-----GNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKS 349 (823)
Q Consensus 275 ~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 349 (823)
..++|++|++++|.++|.+|..+ ..++.|+.++++.|.+ ..+.+ ....+....+|+.|++++|.+.....
T Consensus 274 ~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~~--~~~~~~~~~~L~~L~l~~n~~~~~~~-- 348 (562)
T 3a79_B 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSKE--ALYSVFAEMNIKMLSISDTPFIHMVC-- 348 (562)
T ss_dssp TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCHH--HHHHHHHTCCCSEEEEESSCCCCCCC--
T ss_pred hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecChh--hhhhhhccCcceEEEccCCCcccccC--
Confidence 23489999999999999999888 7888888888888877 22111 11112223679999999999864421
Q ss_pred ccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCC--chhcccccCCCCEEEccCCCCCCcchH-hhhcC
Q 045449 350 IGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGP--IPVTFSQLQTLQAFDLTRNKLAGPITD-ELCHL 426 (823)
Q Consensus 350 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l 426 (823)
...+ ++|++|++++|++++.+|..+.++++|++|+|++|++++. +|..+..+++|++|+|++|++++.+|. .+..+
T Consensus 349 ~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l 427 (562)
T 3a79_B 349 PPSP-SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA 427 (562)
T ss_dssp CSSC-CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCC
T ss_pred ccCC-CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCc
Confidence 1344 7899999999999999999999999999999999999973 467799999999999999999985665 48889
Q ss_pred CCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCcc-ccCCCCCcEEE
Q 045449 427 ARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLD-IGNLKVVIGLD 505 (823)
Q Consensus 427 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~-~~~l~~L~~L~ 505 (823)
++|+.|+|++|++++.+|..+. ++|+.|+|++|+++. +|..++.+++|+.|||++|+++ .+|.. +..++.|+.|+
T Consensus 428 ~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 503 (562)
T 3a79_B 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIW 503 (562)
T ss_dssp TTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEE
T ss_pred ccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEE
Confidence 9999999999999998887765 789999999999995 7777779999999999999999 56665 99999999999
Q ss_pred cccCCCCCCCCC
Q 045449 506 FSRNNLSGDIPI 517 (823)
Q Consensus 506 ls~N~l~g~ip~ 517 (823)
+++|+++|.+|.
T Consensus 504 l~~N~~~c~c~~ 515 (562)
T 3a79_B 504 LHDNPWDCTCPG 515 (562)
T ss_dssp CCSCCBCCCHHH
T ss_pred ecCCCcCCCcch
Confidence 999999988764
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.6e-43 Score=394.85 Aligned_cols=377 Identities=22% Similarity=0.279 Sum_probs=205.5
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCC-------------CEEECCCCcCcCCCch
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTL-------------KLLDFSDNQLFGSLSS 118 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 118 (823)
.++++|++++|++ |.+|++++++++|++|+|++|+++|.+|.+++++++| ++|++++|.+++. |.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC
Confidence 4688899999999 8899999999999999999999999999999988865 8899999988863 33
Q ss_pred hhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCc
Q 045449 119 FIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPR 198 (823)
Q Consensus 119 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~ 198 (823)
. .++|++|+|++|++++ +|.. +++|++|++++|++++ +|...
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~----------~~~L~~L~l~~n~l~~-l~~~~----------------------- 130 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL----------PQSLKSLLVDNNNLKA-LSDLP----------------------- 130 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC----------CTTCCEEECCSSCCSC-CCSCC-----------------------
T ss_pred C---cCCCCEEEccCCcCCc-cccc----------cCCCcEEECCCCccCc-ccCCC-----------------------
Confidence 2 3688999999998885 5532 2678899999988874 22211
Q ss_pred ccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCC
Q 045449 199 EIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSK 278 (823)
Q Consensus 199 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 278 (823)
++|++|++++|++++ +| .|.++++|++|++++|++++ +|.. .++|++|++++|++++ +| .+.++++
T Consensus 131 -----~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~ 196 (454)
T 1jl5_A 131 -----PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPF 196 (454)
T ss_dssp -----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred -----CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCC
Confidence 345566666666664 44 36666666666666666653 4432 2356666666666664 34 4666666
Q ss_pred CCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccc
Q 045449 279 LSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLE 358 (823)
Q Consensus 279 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 358 (823)
|++|++++|++++ +|... ++|++|++++|.++.. + .+..+++|+.|++++|++++ +|.. +.+|+
T Consensus 197 L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~l------p-~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~ 260 (454)
T 1jl5_A 197 LTAIYADNNSLKK-LPDLP---LSLESIVAGNNILEEL------P-ELQNLPFLTTIYADNNLLKT-LPDL----PPSLE 260 (454)
T ss_dssp CCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSSC------C-CCTTCTTCCEEECCSSCCSS-CCSC----CTTCC
T ss_pred CCEEECCCCcCCc-CCCCc---CcccEEECcCCcCCcc------c-ccCCCCCCCEEECCCCcCCc-cccc----ccccC
Confidence 6666666666664 23222 3566666666666532 2 25566666666666666664 2321 14566
Q ss_pred eEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcC-CCCCEEEcccC
Q 045449 359 TILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHL-ARLHSLVLQGN 437 (823)
Q Consensus 359 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N 437 (823)
+|++++|++++ +|.. .++|++|++++|++++ +|.. .++|++|++++|++++. + .+ ++|+.|++++|
T Consensus 261 ~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N 327 (454)
T 1jl5_A 261 ALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNN 327 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSS
T ss_pred EEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCC
Confidence 66666666664 3332 2556666666666664 2211 14566666666666642 1 22 35666666666
Q ss_pred cCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc--ccCccccCC-------------CCCc
Q 045449 438 KFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG--PLSLDIGNL-------------KVVI 502 (823)
Q Consensus 438 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g--~~p~~~~~l-------------~~L~ 502 (823)
++++ +|.. +++|+.|++++|++++ +|. .+++|++|++++|++++ .+|.+++.+ +.|+
T Consensus 328 ~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~ 399 (454)
T 1jl5_A 328 KLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLK 399 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-------------
T ss_pred cccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCC
Confidence 6664 4443 3556666666666664 333 35666666666666666 566666555 7899
Q ss_pred EEEcccCCCCC--CCCCcc
Q 045449 503 GLDFSRNNLSG--DIPITI 519 (823)
Q Consensus 503 ~L~ls~N~l~g--~ip~~~ 519 (823)
.||+++|+++| .||.++
T Consensus 400 ~L~ls~N~l~~~~~iP~sl 418 (454)
T 1jl5_A 400 QLHVETNPLREFPDIPESV 418 (454)
T ss_dssp -------------------
T ss_pred EEECCCCcCCccccchhhH
Confidence 99999999997 666554
No 28
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.8e-43 Score=394.74 Aligned_cols=385 Identities=24% Similarity=0.274 Sum_probs=242.6
Q ss_pred cEEEEEcCCCCCccccCcccCCCCCC-------------cEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchh
Q 045449 53 RVIGLNISSFNLQGTITPQLGNLSSL-------------QTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSF 119 (823)
Q Consensus 53 ~v~~L~L~~~~l~g~~~~~l~~l~~L-------------~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 119 (823)
+++.|++++|.+.|.+|.+++++++| ++|++++|++++ +|.. .++|++|+|++|.+++ +|..
T Consensus 35 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~ 109 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL 109 (454)
T ss_dssp CHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC
T ss_pred chhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc
Confidence 57789999999999999999999875 999999999996 4442 3789999999999998 6653
Q ss_pred hhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcc
Q 045449 120 IFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPRE 199 (823)
Q Consensus 120 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~ 199 (823)
+++|++|++++|++++ +|. + .++|++|+|++|++++ +| +|+++++|++|. +.+|.+.+ +|..
T Consensus 110 ---~~~L~~L~l~~n~l~~-l~~----~------~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~-l~~N~l~~-lp~~ 171 (454)
T 1jl5_A 110 ---PQSLKSLLVDNNNLKA-LSD----L------PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID-VDNNSLKK-LPDL 171 (454)
T ss_dssp ---CTTCCEEECCSSCCSC-CCS----C------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE-CCSSCCSC-CCCC
T ss_pred ---cCCCcEEECCCCccCc-ccC----C------CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE-CCCCcCcc-cCCC
Confidence 4899999999999984 221 1 1689999999999996 77 588888887774 66666554 5654
Q ss_pred cCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCC
Q 045449 200 IGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKL 279 (823)
Q Consensus 200 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 279 (823)
+ .+|++|++++|++++ +| .+.++++|++|++++|.+++ +|.. .++|++|++++|+++ .+|. +..+++|
T Consensus 172 ~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp~-~~~l~~L 239 (454)
T 1jl5_A 172 P---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELPE-LQNLPFL 239 (454)
T ss_dssp C---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCCC-CTTCTTC
T ss_pred c---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-cccc-cCCCCCC
Confidence 4 367777888888776 45 57777888888888888773 5542 347788888888777 5663 7777788
Q ss_pred CeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccce
Q 045449 280 SDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLET 359 (823)
Q Consensus 280 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~ 359 (823)
++|++++|++++ +|.. +++|+.|++++|++++.+. ..++|+.|++++|.+++. | ..+.+|++
T Consensus 240 ~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~~---------~~~~L~~L~ls~N~l~~l-~----~~~~~L~~ 301 (454)
T 1jl5_A 240 TTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLPE---------LPQSLTFLDVSENIFSGL-S----ELPPNLYY 301 (454)
T ss_dssp CEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCSEE-S----CCCTTCCE
T ss_pred CEEECCCCcCCc-cccc---ccccCEEECCCCcccccCc---------ccCcCCEEECcCCccCcc-c----CcCCcCCE
Confidence 888888887775 3432 3677778888887776422 126777788888877762 1 12256777
Q ss_pred EEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcC
Q 045449 360 ILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKF 439 (823)
Q Consensus 360 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 439 (823)
|++++|++++. +.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|. .+++|++|++++|++
T Consensus 302 L~l~~N~l~~i-~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l 369 (454)
T 1jl5_A 302 LNASSNEIRSL-CDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPL 369 (454)
T ss_dssp EECCSSCCSEE-CCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EECcCCcCCcc-cCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCC
Confidence 77777777752 211 1477777787777775 5543 4677777777777774 444 357777777777777
Q ss_pred cc--cccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc--ccCccccCCCCCcEEEcccCCCCCCC
Q 045449 440 SG--SIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG--PLSLDIGNLKVVIGLDFSRNNLSGDI 515 (823)
Q Consensus 440 ~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~i 515 (823)
++ .+|.+++. |+.|.+.|.+|.. +++|+.||+++|++++ .+|.+ ++.|.+++|.+.+.+
T Consensus 370 ~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~ 432 (454)
T 1jl5_A 370 REFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPY 432 (454)
T ss_dssp SSCCCCCTTCCE--------EECCC-------------------------------------------------------
T ss_pred CcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcc
Confidence 77 56655543 3346666666653 4789999999999998 77765 455678888888766
Q ss_pred CCcc
Q 045449 516 PITI 519 (823)
Q Consensus 516 p~~~ 519 (823)
|...
T Consensus 433 ~~~~ 436 (454)
T 1jl5_A 433 EFAH 436 (454)
T ss_dssp ----
T ss_pred ccCH
Confidence 6443
No 29
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-41 Score=402.04 Aligned_cols=443 Identities=18% Similarity=0.159 Sum_probs=360.9
Q ss_pred cEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecc
Q 045449 53 RVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLS 132 (823)
Q Consensus 53 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 132 (823)
+++.|||++|+|++..+.+|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 68999999999998888889999999999999999998888899999999999999999999888899999999999999
Q ss_pred cccccCc-cCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHH---HhhcCCCcccCCcccCCcchhhh
Q 045449 133 INRLSGE-LPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEII---STITNSTVCEIPREIGNLPYLAR 208 (823)
Q Consensus 133 ~N~l~~~-~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~---~l~~n~~~~~ip~~l~~l~~L~~ 208 (823)
+|++++. +|. .++.+++|++|+|++|++++..|..|..+.+++.+. .+..|.+....+..+. ...+..
T Consensus 157 ~N~l~~~~~~~-------~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~ 228 (635)
T 4g8a_A 157 HNLIQSFKLPE-------YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHK 228 (635)
T ss_dssp SSCCCCCCCCG-------GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEE
T ss_pred cCccccCCCch-------hhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccccc-chhhhh
Confidence 9999753 344 348899999999999999998888888777655321 1233444333233222 223334
Q ss_pred hccccccccC----------------------------------------------------------CccccccCCCCC
Q 045449 209 LALATNNLVG----------------------------------------------------------VVPVTIFNMSAL 230 (823)
Q Consensus 209 L~Ls~N~l~~----------------------------------------------------------~~p~~~~~l~~L 230 (823)
+++.+|.... ..+..+..+.++
T Consensus 229 l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 308 (635)
T 4g8a_A 229 LTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNV 308 (635)
T ss_dssp EEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTC
T ss_pred hhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccc
Confidence 4444332210 011223345567
Q ss_pred cEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccC
Q 045449 231 KEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIAD 310 (823)
Q Consensus 231 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 310 (823)
+.+++.+|.+.+ ++. + .....|+.|++++|.+.+..+. .+..|+.++++.|.+... .....+++|+.|++++
T Consensus 309 ~~l~~~~~~~~~-~~~-~-~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~ 380 (635)
T 4g8a_A 309 SSFSLVSVTIER-VKD-F-SYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSR 380 (635)
T ss_dssp SEEEEESCEEEE-CGG-G-GSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCS
T ss_pred cccccccccccc-ccc-c-ccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhc
Confidence 777777777763 332 2 2367899999999999865443 467799999999988754 3456899999999999
Q ss_pred ccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccC-ccccCcccccEEEcccC
Q 045449 311 NYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIP-QVVGNLSNLLVLELGGN 389 (823)
Q Consensus 311 N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N 389 (823)
|.+..... .+..+..+.+|+.++++.|.+.+. +..+..+ .+|+.++++.|++....+ ..|..+++++.++++.|
T Consensus 381 n~l~~~~~---~~~~~~~~~~L~~L~~~~~~~~~~-~~~~~~l-~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n 455 (635)
T 4g8a_A 381 NGLSFKGC---CSQSDFGTISLKYLDLSFNGVITM-SSNFLGL-EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 455 (635)
T ss_dssp SCCBEEEE---CCHHHHSCSCCCEEECCSCSEEEE-CSCCTTC-TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTS
T ss_pred cccccccc---cccchhhhhhhhhhhccccccccc-ccccccc-ccccchhhhhcccccccccccccccccccccccccc
Confidence 99875421 344566788999999999998764 4456666 799999999998877654 56889999999999999
Q ss_pred cCCCCchhcccccCCCCEEEccCCCC-CCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccc
Q 045449 390 NLTGPIPVTFSQLQTLQAFDLTRNKL-AGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLS 468 (823)
Q Consensus 390 ~l~g~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p 468 (823)
++.+..+..+..+++|++|+|++|++ .+.+|..|..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++.+|
T Consensus 456 ~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 535 (635)
T 4g8a_A 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 535 (635)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCC
T ss_pred ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCCh
Confidence 99999999999999999999999985 44678889999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCcEEeccccccccccCccccCC-CCCcEEEcccCCCCCCCC
Q 045449 469 STIWNLKDILFIDVSSNFLDGPLSLDIGNL-KVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 469 ~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l-~~L~~L~ls~N~l~g~ip 516 (823)
..+..+++|++|||++|+|++..|..+..+ ++|+.|+|++|+|++...
T Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred hHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999999999999999999988 789999999999998654
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-41 Score=385.30 Aligned_cols=353 Identities=17% Similarity=0.188 Sum_probs=257.4
Q ss_pred cEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecc
Q 045449 53 RVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLS 132 (823)
Q Consensus 53 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 132 (823)
+++.|++++|++++. | .++.+++|++|+|++|+|++. | ++.+++|++|+|++|.|++. + ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 566777777777754 3 577777777777777777753 3 67777777777777777664 2 6677777777777
Q ss_pred cccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccc
Q 045449 133 INRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALA 212 (823)
Q Consensus 133 ~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls 212 (823)
+|++++ +| ++.+++|++|++++|++++. + ++++++|++|+++
T Consensus 115 ~N~l~~-l~---------~~~l~~L~~L~l~~N~l~~l-~---------------------------l~~l~~L~~L~l~ 156 (457)
T 3bz5_A 115 TNKLTK-LD---------VSQNPLLTYLNCARNTLTEI-D---------------------------VSHNTQLTELDCH 156 (457)
T ss_dssp SSCCSC-CC---------CTTCTTCCEEECTTSCCSCC-C---------------------------CTTCTTCCEEECT
T ss_pred CCcCCe-ec---------CCCCCcCCEEECCCCcccee-c---------------------------cccCCcCCEEECC
Confidence 777764 22 36667777777777776642 1 3345567777777
Q ss_pred cccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeeccccccc
Q 045449 213 TNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGF 292 (823)
Q Consensus 213 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 292 (823)
+|+..+.+ .+..+++|++|++++|++++ +| +. .+++|++|++++|++++. .+..+++|++|++++|++++
T Consensus 157 ~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~-~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~- 226 (457)
T 3bz5_A 157 LNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VS-QNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE- 226 (457)
T ss_dssp TCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CT-TCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-
T ss_pred CCCccccc--ccccCCcCCEEECCCCccce-ec--cc-cCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-
Confidence 77655554 36677788888888888874 55 33 477788888888888764 37777788888888888877
Q ss_pred CCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccC
Q 045449 293 IPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIP 372 (823)
Q Consensus 293 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p 372 (823)
+| ++.+++|++|++++|++++.+ +..+++|+.|++++| +|++|++++|.+.+.+|
T Consensus 227 ip--~~~l~~L~~L~l~~N~l~~~~--------~~~l~~L~~L~l~~n---------------~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 227 ID--VTPLTQLTYFDCSVNPLTELD--------VSTLSKLTTLHCIQT---------------DLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCSCCC--------CTTCTTCCEEECTTC---------------CCSCCCCTTCTTCCEEE
T ss_pred cC--ccccCCCCEEEeeCCcCCCcC--------HHHCCCCCEEeccCC---------------CCCEEECCCCccCCccc
Confidence 34 777788888888888887752 345677777777655 35567788888877776
Q ss_pred ccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCC
Q 045449 373 QVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTS 452 (823)
Q Consensus 373 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 452 (823)
++.+++|+.|++++|.+.|.+|. ...+|+.|++++| ++|+.|+|++|+|++. + ++++++
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~ 340 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTK 340 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTT
T ss_pred --ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCc
Confidence 46788888888888888887775 3456666666665 5789999999999984 3 889999
Q ss_pred CCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCccc
Q 045449 453 VRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIG 520 (823)
Q Consensus 453 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~ 520 (823)
|+.|++++|++++ ++.|..|++++|.++|. +++..|..+++++|+|+|.||..+.
T Consensus 341 L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 341 LKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp CSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred CcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 9999999999987 35677788999999987 3556778889999999988887653
No 31
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.5e-39 Score=366.26 Aligned_cols=343 Identities=24% Similarity=0.382 Sum_probs=182.9
Q ss_pred cEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecc
Q 045449 53 RVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLS 132 (823)
Q Consensus 53 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 132 (823)
+++.|+++++++.. +| .+..+++|++|||++|.+++..| +.++++|++|+|++|.+++..+ ++++++|++|+|+
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 120 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLF 120 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECC
Confidence 46667777766653 33 36666777777777777765433 6677777777777777765544 6667777777777
Q ss_pred cccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccc
Q 045449 133 INRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALA 212 (823)
Q Consensus 133 ~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls 212 (823)
+|++++..+ +.++++|++|+|++|.+++ ++ .++.+++|++|+++
T Consensus 121 ~n~l~~~~~---------~~~l~~L~~L~l~~n~l~~-~~--------------------------~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 121 NNQITDIDP---------LKNLTNLNRLELSSNTISD-IS--------------------------ALSGLTSLQQLSFG 164 (466)
T ss_dssp SSCCCCCGG---------GTTCTTCSEEEEEEEEECC-CG--------------------------GGTTCTTCSEEEEE
T ss_pred CCCCCCChH---------HcCCCCCCEEECCCCccCC-Ch--------------------------hhccCCcccEeecC
Confidence 776664311 3566677777777776653 11 12333444555553
Q ss_pred cccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeeccccccc
Q 045449 213 TNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGF 292 (823)
Q Consensus 213 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 292 (823)
|.+.+..+ +.++++|++|++++|.++ .++. +. .+++|++|++++|++++..| ++.+++|+.|++++|+++
T Consensus 165 -~~~~~~~~--~~~l~~L~~L~l~~n~l~-~~~~-l~-~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-- 234 (466)
T 1o6v_A 165 -NQVTDLKP--LANLTTLERLDISSNKVS-DISV-LA-KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-- 234 (466)
T ss_dssp -ESCCCCGG--GTTCTTCCEEECCSSCCC-CCGG-GG-GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC--
T ss_pred -CcccCchh--hccCCCCCEEECcCCcCC-CChh-hc-cCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc--
Confidence 33433222 555555555555555554 2221 11 24445555555444443333 334444444444444444
Q ss_pred CCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccC
Q 045449 293 IPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIP 372 (823)
Q Consensus 293 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p 372 (823)
+. ..+..+++|+.|++++|.+++..| +..+ ++|++|++++|.+++..+
T Consensus 235 ----------------------~~-------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l-~~L~~L~l~~n~l~~~~~ 282 (466)
T 1o6v_A 235 ----------------------DI-------GTLASLTNLTDLDLANNQISNLAP--LSGL-TKLTELKLGANQISNISP 282 (466)
T ss_dssp ----------------------CC-------GGGGGCTTCSEEECCSSCCCCCGG--GTTC-TTCSEEECCSSCCCCCGG
T ss_pred ----------------------cc-------hhhhcCCCCCEEECCCCccccchh--hhcC-CCCCEEECCCCccCcccc
Confidence 32 123344444444445444444322 3333 344555555554444332
Q ss_pred ccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCC
Q 045449 373 QVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTS 452 (823)
Q Consensus 373 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 452 (823)
+..+++|++|++++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|.+++. ..+.++++
T Consensus 283 --~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 354 (466)
T 1o6v_A 283 --LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTN 354 (466)
T ss_dssp --GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred --ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCC
Confidence 4455555666666666554333 4555556666666666655444 45555566666666655543 34555555
Q ss_pred CCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 453 VRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 453 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
|+.|++++|++++.+| +..+++|+.|++++|.+++
T Consensus 355 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 355 INWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555555555555544 5555555555555555554
No 32
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=9.6e-40 Score=369.27 Aligned_cols=333 Identities=17% Similarity=0.153 Sum_probs=268.3
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|+|++|++++. | ++.+++|++|+|++|+|++. | |+.+++|++|+|++|++++. | ++.+++|++|+|
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEEC
Confidence 4789999999999985 3 99999999999999999975 4 99999999999999999974 4 899999999999
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhcc
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLAL 211 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~L 211 (823)
++|++++. + ++.+++|++|++++|+..+.++ ++.+++|++|++
T Consensus 135 ~~N~l~~l-~---------l~~l~~L~~L~l~~n~~~~~~~---------------------------~~~l~~L~~L~l 177 (457)
T 3bz5_A 135 ARNTLTEI-D---------VSHNTQLTELDCHLNKKITKLD---------------------------VTPQTQLTTLDC 177 (457)
T ss_dssp TTSCCSCC-C---------CTTCTTCCEEECTTCSCCCCCC---------------------------CTTCTTCCEEEC
T ss_pred CCCcccee-c---------cccCCcCCEEECCCCCcccccc---------------------------cccCCcCCEEEC
Confidence 99999863 2 3789999999999997554431 345677889999
Q ss_pred ccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccc
Q 045449 212 ATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSG 291 (823)
Q Consensus 212 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 291 (823)
++|++++. | +..+++|+.|++++|.+++ ++ +. .+++|++|+|++|++++ +| +..+++|++|++++|++++
T Consensus 178 s~n~l~~l-~--l~~l~~L~~L~l~~N~l~~-~~--l~-~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 178 SFNKITEL-D--VSQNKLLNRLNCDTNNITK-LD--LN-QNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CSSCCCCC-C--CTTCTTCCEEECCSSCCSC-CC--CT-TCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCcccee-c--cccCCCCCEEECcCCcCCe-ec--cc-cCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 99999974 4 7889999999999999985 33 33 48999999999999997 56 8889999999999999998
Q ss_pred cCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceecc
Q 045449 292 FIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNI 371 (823)
Q Consensus 292 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~ 371 (823)
.. ++.+++|+.|++++|+++ .|++++|.+.+.+| ++.+ ++|++|++++|.+.+.+
T Consensus 248 ~~---~~~l~~L~~L~l~~n~L~-------------------~L~l~~n~~~~~~~--~~~l-~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 248 LD---VSTLSKLTTLHCIQTDLL-------------------EIDLTHNTQLIYFQ--AEGC-RKIKELDVTHNTQLYLL 302 (457)
T ss_dssp CC---CTTCTTCCEEECTTCCCS-------------------CCCCTTCTTCCEEE--CTTC-TTCCCCCCTTCTTCCEE
T ss_pred cC---HHHCCCCCEEeccCCCCC-------------------EEECCCCccCCccc--cccc-ccCCEEECCCCccccee
Confidence 64 456677888877766543 45677777777766 3455 67888888888887777
Q ss_pred CccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCC
Q 045449 372 PQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLT 451 (823)
Q Consensus 372 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 451 (823)
|. ..++|+.|++++| ++|++|++++|+|++. + ++++++|+.|++++|+|++ ++
T Consensus 303 ~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~ 355 (457)
T 3bz5_A 303 DC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FS 355 (457)
T ss_dssp EC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CT
T ss_pred cc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------cc
Confidence 74 3455666666555 6788888888888874 3 7888889999999998886 24
Q ss_pred CCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccC
Q 045449 452 SVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGN 497 (823)
Q Consensus 452 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~ 497 (823)
.|..|++++|.++|. +.+..|..+|+++|+++|.+|..+..
T Consensus 356 ~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 356 SVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp TGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred ccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 567778888988886 35677888899999999999876543
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.5e-38 Score=361.91 Aligned_cols=322 Identities=27% Similarity=0.412 Sum_probs=235.7
Q ss_pred CcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEec
Q 045449 52 HRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDL 131 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 131 (823)
.+++.|||++|.+++..+ +.++++|++|+|++|++++..+ ++++++|++|+|++|.+++..+ +.++++|++|+|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 478999999999997644 9999999999999999997655 9999999999999999987654 899999999999
Q ss_pred ccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhcc
Q 045449 132 SINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLAL 211 (823)
Q Consensus 132 s~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~L 211 (823)
++|++++ ++ .+..+++|++|+++ |.+.+. ..+.++++|++|++
T Consensus 142 ~~n~l~~-~~--------~~~~l~~L~~L~l~-~~~~~~---------------------------~~~~~l~~L~~L~l 184 (466)
T 1o6v_A 142 SSNTISD-IS--------ALSGLTSLQQLSFG-NQVTDL---------------------------KPLANLTTLERLDI 184 (466)
T ss_dssp EEEEECC-CG--------GGTTCTTCSEEEEE-ESCCCC---------------------------GGGTTCTTCCEEEC
T ss_pred CCCccCC-Ch--------hhccCCcccEeecC-CcccCc---------------------------hhhccCCCCCEEEC
Confidence 9999985 22 24889999999996 444321 12566778999999
Q ss_pred ccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccc
Q 045449 212 ATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSG 291 (823)
Q Consensus 212 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 291 (823)
++|++++. ..+..+++|++|++++|.+++..| +. .+++|++|++++|++++. +.+..+++|++|++++|.+++
T Consensus 185 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~-~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 257 (466)
T 1o6v_A 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LG-ILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN 257 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GG-GCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred cCCcCCCC--hhhccCCCCCEEEecCCccccccc--cc-ccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCcccc
Confidence 99999865 348899999999999999996555 33 489999999999999864 468899999999999999997
Q ss_pred cCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceecc
Q 045449 292 FIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNI 371 (823)
Q Consensus 292 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~ 371 (823)
..+ +..+++|+.|++++|.+++.. .+..+++|+.|++++|.+++..| +.
T Consensus 258 ~~~--~~~l~~L~~L~l~~n~l~~~~-------~~~~l~~L~~L~L~~n~l~~~~~--~~-------------------- 306 (466)
T 1o6v_A 258 LAP--LSGLTKLTELKLGANQISNIS-------PLAGLTALTNLELNENQLEDISP--IS-------------------- 306 (466)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCG-------GGTTCTTCSEEECCSSCCSCCGG--GG--------------------
T ss_pred chh--hhcCCCCCEEECCCCccCccc-------cccCCCccCeEEcCCCcccCchh--hc--------------------
Confidence 765 788888888888888887752 25667777777777777665433 33
Q ss_pred CccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCC
Q 045449 372 PQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLT 451 (823)
Q Consensus 372 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 451 (823)
.+++|+.|+|++|++++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..++
T Consensus 307 -----~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~ 375 (466)
T 1o6v_A 307 -----NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLT 375 (466)
T ss_dssp -----GCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCT
T ss_pred -----CCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCC
Confidence 44444455555555444333 34445555555555555443 234445555555555555554444 44555
Q ss_pred CCCeEeccCCcccc
Q 045449 452 SVRVLYLGLNIFTS 465 (823)
Q Consensus 452 ~L~~L~Ls~N~l~~ 465 (823)
+|+.|++++|.+++
T Consensus 376 ~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 376 RITQLGLNDQAWTN 389 (466)
T ss_dssp TCCEEECCCEEEEC
T ss_pred CCCEEeccCCcccC
Confidence 55555555555554
No 34
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.8e-38 Score=369.63 Aligned_cols=174 Identities=18% Similarity=0.211 Sum_probs=127.8
Q ss_pred ccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcc
Q 045449 356 SLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQ 435 (823)
Q Consensus 356 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 435 (823)
+|++|++++|.++...+.. .++|+.|+|++|++++ +..+..+++|++|+|++|.+++.+|..|..+++|+.|+|+
T Consensus 212 ~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 286 (597)
T 3oja_B 212 AVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 286 (597)
T ss_dssp TCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECT
T ss_pred hhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECC
Confidence 3444445555444332222 2467788888888875 3567788888888888888888888888888888888888
Q ss_pred cCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCC
Q 045449 436 GNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDI 515 (823)
Q Consensus 436 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~i 515 (823)
+|.+++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++. | +..++.|+.|++++|+++|..
T Consensus 287 ~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 287 NNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp TSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChh
Confidence 888885 57777778889999999998885 677788889999999999998765 2 677889999999999988543
Q ss_pred CCcccCccCCCCCCCCCCCcccccCCcccCCCCC
Q 045449 516 PITIGEGEIPRGGPFANLTAKSFMGNELLCGLPD 549 (823)
Q Consensus 516 p~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~~ 549 (823)
+..+ +..+....+.++...|+.+.
T Consensus 362 ~~~~----------~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 362 LRAL----------FRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp HHHH----------TTTCCTTTBCCCCCCCCTTC
T ss_pred HHHH----------HHHHhhhccccccccCCcch
Confidence 2221 33444456778888888654
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=358.90 Aligned_cols=329 Identities=20% Similarity=0.165 Sum_probs=278.2
Q ss_pred hhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEe
Q 045449 205 YLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLEL 284 (823)
Q Consensus 205 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 284 (823)
+++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+. .+++|++|+|++|++++..+..|.++++|++|+|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFN-NLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhh-CCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 577889999999888888888999999999999998866566555 4889999999999998766677888999999999
Q ss_pred ecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecC
Q 045449 285 GENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMAN 364 (823)
Q Consensus 285 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 364 (823)
++|++++..|..|..+++|++|+|++|.+++. .+..|.++++|+.|++++|.+++..+..+..+ ++|++|++++
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l-~~L~~L~l~~ 185 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYI-----SHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL-HGLIVLRLRH 185 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEE-----CTTSSTTCTTCCEEEEESCCCSSCCHHHHTTC-TTCCEEEEES
T ss_pred CCCccccCChhHccccccCCEEECCCCcccee-----ChhhccCCCCCCEEECCCCcCcccChhHhccc-CCCcEEeCCC
Confidence 99999988888899999999999999988876 34578888999999999999988777778888 7899999999
Q ss_pred CcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccccc
Q 045449 365 CSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIP 444 (823)
Q Consensus 365 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 444 (823)
|.+++..+..|..+++|+.|++++|.+.+.+|..+....+|++|+|++|++++..+..|..+++|+.|+|++|.+++..+
T Consensus 186 n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 265 (477)
T 2id5_A 186 LNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG 265 (477)
T ss_dssp CCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECT
T ss_pred CcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccCh
Confidence 99998888899999999999999999888888877777799999999999997766788999999999999999998888
Q ss_pred ccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccC
Q 045449 445 SCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEI 524 (823)
Q Consensus 445 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~i 524 (823)
..|..+++|+.|+|++|++++..|..+..+++|+.|||++|.+++..+..+..++.|+.|++++|++++..+...-
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~---- 341 (477)
T 2id5_A 266 SMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWV---- 341 (477)
T ss_dssp TSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHH----
T ss_pred hhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhH----
Confidence 8899999999999999999999999999999999999999999987777889999999999999999876543211
Q ss_pred CCCCCCCCCCcccccCCcccCCCCC
Q 045449 525 PRGGPFANLTAKSFMGNELLCGLPD 549 (823)
Q Consensus 525 p~~~~~~~~~~~~~~~n~~~c~~~~ 549 (823)
+.......+.++...|..|.
T Consensus 342 -----~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 342 -----FRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp -----HTTTTSSCCTTCCCBEEESG
T ss_pred -----HhhhhccccCccCceeCCch
Confidence 11112234556666776554
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-37 Score=344.29 Aligned_cols=173 Identities=17% Similarity=0.207 Sum_probs=121.6
Q ss_pred ccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcc
Q 045449 356 SLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQ 435 (823)
Q Consensus 356 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 435 (823)
+|++|++++|.++..... ..++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|+.|+|+
T Consensus 206 ~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (390)
T 3o6n_A 206 AVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280 (390)
T ss_dssp SCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECC
T ss_pred cceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECC
Confidence 344455555554433221 135677778888877753 467778888888888888887778888888888888888
Q ss_pred cCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCC
Q 045449 436 GNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDI 515 (823)
Q Consensus 436 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~i 515 (823)
+|++++ +|..+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++.. | +..++.|+.|++++|++++.-
T Consensus 281 ~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp SSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchh
Confidence 888875 56666778888888888888885 566778888899999999988754 3 677888999999999888532
Q ss_pred CCcccCccCCCCCCCCCCCcccccCCcccCCCC
Q 045449 516 PITIGEGEIPRGGPFANLTAKSFMGNELLCGLP 548 (823)
Q Consensus 516 p~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~ 548 (823)
...+ +..+....+.+++..|..+
T Consensus 356 ~~~~----------~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 356 LRAL----------FRNVARPAVDDADQHCKID 378 (390)
T ss_dssp HHHH----------TTTCCTTTBCCCCSCCCTT
T ss_pred HHHH----------HHHHHhhcccccCceeccc
Confidence 2111 2233334456666667654
No 37
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=351.82 Aligned_cols=316 Identities=20% Similarity=0.204 Sum_probs=231.2
Q ss_pred CCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCc
Q 045449 60 SSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGE 139 (823)
Q Consensus 60 ~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 139 (823)
++++++ .+|..+. +++++|||++|+|++..|..|.++++|++|+|++|.|++..|.+|.++++|++|+|++|++++.
T Consensus 19 ~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 95 (477)
T 2id5_A 19 HRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLI 95 (477)
T ss_dssp CSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred CCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCcc
Confidence 344454 4555543 5899999999999988899999999999999999999998899999999999999999999843
Q ss_pred cCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCC
Q 045449 140 LPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGV 219 (823)
Q Consensus 140 ~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~ 219 (823)
.+.. |.++++|++|+|++|++++..|. .|.++++|++|+|++|++++.
T Consensus 96 ~~~~-------~~~l~~L~~L~Ls~n~i~~~~~~-------------------------~~~~l~~L~~L~l~~n~l~~~ 143 (477)
T 2id5_A 96 PLGV-------FTGLSNLTKLDISENKIVILLDY-------------------------MFQDLYNLKSLEVGDNDLVYI 143 (477)
T ss_dssp CTTS-------STTCTTCCEEECTTSCCCEECTT-------------------------TTTTCTTCCEEEECCTTCCEE
T ss_pred Cccc-------ccCCCCCCEEECCCCccccCChh-------------------------HccccccCCEEECCCCcccee
Confidence 3222 48899999999999998865443 345556778888888988888
Q ss_pred ccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCC
Q 045449 220 VPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGN 299 (823)
Q Consensus 220 ~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 299 (823)
.|..|.++++|++|+|++|.++ .+|...+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|..+..
T Consensus 144 ~~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~ 222 (477)
T 2id5_A 144 SHRAFSGLNSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 222 (477)
T ss_dssp CTTSSTTCTTCCEEEEESCCCS-SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTT
T ss_pred ChhhccCCCCCCEEECCCCcCc-ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccccc
Confidence 8888888889999999999888 555554555888888888888888887788888888888888888877777766666
Q ss_pred CcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcc
Q 045449 300 LRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLS 379 (823)
Q Consensus 300 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 379 (823)
..+|+.|+|++|.++.. ....+.++++|+.|+|++|.+++..+..|..+ .+|++|+|++|++++..|..|.+++
T Consensus 223 ~~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~ 296 (477)
T 2id5_A 223 GLNLTSLSITHCNLTAV-----PYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL-LRLQEIQLVGGQLAVVEPYAFRGLN 296 (477)
T ss_dssp TCCCSEEEEESSCCCSC-----CHHHHTTCTTCCEEECCSSCCCEECTTSCTTC-TTCCEEECCSSCCSEECTTTBTTCT
T ss_pred CccccEEECcCCccccc-----CHHHhcCccccCeeECCCCcCCccChhhcccc-ccCCEEECCCCccceECHHHhcCcc
Confidence 66777777777776654 12345566666666666666665555555555 4555555555555555555555555
Q ss_pred cccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCC
Q 045449 380 NLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAG 417 (823)
Q Consensus 380 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 417 (823)
+|++|+|++|++++..+..|..+++|++|+|++|.++.
T Consensus 297 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 297 YLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 55555555555555444455555555555555555543
No 38
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=4.8e-37 Score=332.30 Aligned_cols=279 Identities=18% Similarity=0.252 Sum_probs=193.0
Q ss_pred ccchHHHHHHHHHHHHhccCCCcccccccc----CCCCCCccceeeeeCC--------CCCcEEEEEcCCCCCccccCcc
Q 045449 4 KSIISQHQQALLALKAHISYDHTNLFARNW----TSSTSVCIWIGITCDV--------NSHRVIGLNISSFNLQGTITPQ 71 (823)
Q Consensus 4 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~~W----~~~~~~c~w~gv~c~~--------~~~~v~~L~L~~~~l~g~~~~~ 71 (823)
+..+++|++||++||+++..|+.+... +| ....++|.|.|+.|+. ...+|+.|+|++|+++ .+|+.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~-~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHS-AWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHH-HHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cccCchHHHHHHHHHHhccCCchhhhh-hhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 346778999999999998778877776 89 4567899999999952 3457888888888887 67777
Q ss_pred cCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccC--CCC
Q 045449 72 LGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICK--IPS 149 (823)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~p~ 149 (823)
++++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .+|..|+++++|++|+|++|++.+.+|..+.. ++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 888888888888888888 78888888888888888888887 66777888888888888888777777765521 233
Q ss_pred CCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCC
Q 045449 150 TLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSA 229 (823)
Q Consensus 150 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 229 (823)
.|.++++|++|+|++|+++ .+|..+ +++++|++|+|++|++++ +|..+.++++
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l-------------------------~~l~~L~~L~L~~N~l~~-l~~~l~~l~~ 230 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASI-------------------------ANLQNLKSLKIRNSPLSA-LGPAIHHLPK 230 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGG-------------------------GGCTTCCEEEEESSCCCC-CCGGGGGCTT
T ss_pred hhccCCCCCEEECcCCCcC-cchHhh-------------------------cCCCCCCEEEccCCCCCc-CchhhccCCC
Confidence 3445667777777777665 444333 233445556666666664 3445666666
Q ss_pred CcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCccccc
Q 045449 230 LKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIA 309 (823)
Q Consensus 230 L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 309 (823)
|++|+|++|.+.+.+|..+.. +++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..++++++|+.+++.
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~-l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGG-RAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVP 309 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTC-CCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECC
T ss_pred CCEEECcCCcchhhhHHHhcC-CCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCC
Confidence 666666666666666655443 6666666666666666666666666666666666666666666666666666666655
Q ss_pred Ccccc
Q 045449 310 DNYLT 314 (823)
Q Consensus 310 ~N~l~ 314 (823)
.|.+.
T Consensus 310 ~~~~~ 314 (328)
T 4fcg_A 310 PHLQA 314 (328)
T ss_dssp GGGSC
T ss_pred HHHHH
Confidence 55444
No 39
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-35 Score=319.87 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=199.1
Q ss_pred CCccEEEeecccccc--ccCccccCCCCCCeEEeec-ccccccCCCccCCCcccCcccccCccccCCCCcccccccccCC
Q 045449 253 PNVETLNLGINSFSG--TIPSSITNSSKLSDLELGE-NLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNC 329 (823)
Q Consensus 253 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l 329 (823)
.+++.|+|++|++++ .+|..+.++++|++|+|++ |.+.+.+|..|+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l----------------------------- 100 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL----------------------------- 100 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGC-----------------------------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcC-----------------------------
Confidence 467777777777777 6777777777777777774 77766666555444
Q ss_pred CCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccC-CCCEE
Q 045449 330 KKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQ-TLQAF 408 (823)
Q Consensus 330 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L 408 (823)
++|++|+|++|.+++.+|..+..+ ++|++|++++|.+++.+|..+..+++|++|+|++|+++|.+|..+..++ +|++|
T Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L 179 (313)
T 1ogq_A 101 TQLHYLYITHTNVSGAIPDFLSQI-KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179 (313)
T ss_dssp TTCSEEEEEEECCEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEE
T ss_pred CCCCEEECcCCeeCCcCCHHHhCC-CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEE
Confidence 455555555666655666666666 5777777777777777777777788888888888888877888887777 78888
Q ss_pred EccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccc
Q 045449 409 DLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 409 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 488 (823)
+|++|++++.+|..+..++ |+.|+|++|.+++.+|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|++|.++
T Consensus 180 ~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 257 (313)
T 1ogq_A 180 TISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIY 257 (313)
T ss_dssp ECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCE
T ss_pred ECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCccc
Confidence 8888888888888888876 88888888888888888888888888888888888877666 777888899999999998
Q ss_pred cccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCCCCC
Q 045449 489 GPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLPDL 550 (823)
Q Consensus 489 g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~~~ 550 (823)
|.+|..+..++.|+.|++++|+++|.+| ....+..+....+.+|+++||.|..
T Consensus 258 ~~~p~~l~~l~~L~~L~Ls~N~l~~~ip---------~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIP---------QGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECC---------CSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred CcCChHHhcCcCCCEEECcCCcccccCC---------CCccccccChHHhcCCCCccCCCCC
Confidence 8888888889999999999999885444 4445677888899999999998754
No 40
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9e-34 Score=309.71 Aligned_cols=306 Identities=22% Similarity=0.345 Sum_probs=255.0
Q ss_pred ccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCc
Q 045449 152 SKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALK 231 (823)
Q Consensus 152 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 231 (823)
..+++|++|++++|.++. +| .+..+++|++|++++|++++..+ +.++++|+
T Consensus 41 ~~l~~L~~L~l~~~~i~~-~~--------------------------~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~ 91 (347)
T 4fmz_A 41 EELESITKLVVAGEKVAS-IQ--------------------------GIEYLTNLEYLNLNGNQITDISP--LSNLVKLT 91 (347)
T ss_dssp HHHTTCSEEECCSSCCCC-CT--------------------------TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hhcccccEEEEeCCcccc-ch--------------------------hhhhcCCccEEEccCCccccchh--hhcCCcCC
Confidence 567889999999988762 22 13445678889999999986544 88899999
Q ss_pred EEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCc
Q 045449 232 EISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADN 311 (823)
Q Consensus 232 ~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 311 (823)
+|++++|.++ .+| .+ ..+++|++|++++|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|
T Consensus 92 ~L~L~~n~i~-~~~-~~-~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~ 165 (347)
T 4fmz_A 92 NLYIGTNKIT-DIS-AL-QNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTES 165 (347)
T ss_dssp EEECCSSCCC-CCG-GG-TTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSS
T ss_pred EEEccCCccc-Cch-HH-cCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCC
Confidence 9999999988 455 33 358999999999999986433 8889999999999996665544 4889999999999999
Q ss_pred cccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcC
Q 045449 312 YLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNL 391 (823)
Q Consensus 312 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (823)
.+++.. .+..+++|+.|++++|.+.+..+ +..+ .+|++|++++|.+++..+ +..+++|++|++++|++
T Consensus 166 ~~~~~~-------~~~~l~~L~~L~l~~n~l~~~~~--~~~l-~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 166 KVKDVT-------PIANLTDLYSLSLNYNQIEDISP--LASL-TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp CCCCCG-------GGGGCTTCSEEECTTSCCCCCGG--GGGC-TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred CcCCch-------hhccCCCCCEEEccCCccccccc--ccCC-CccceeecccCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 988762 27888999999999999986544 6666 789999999999987655 88899999999999999
Q ss_pred CCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhh
Q 045449 392 TGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTI 471 (823)
Q Consensus 392 ~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 471 (823)
++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+
T Consensus 234 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 234 TDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 86544 88999999999999999864 4688899999999999999865 468899999999999999999999999
Q ss_pred hccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCC
Q 045449 472 WNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLS 512 (823)
Q Consensus 472 ~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 512 (823)
..+++|+.|++++|.+++..| +..++.|+.||+++|+++
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999998777 888999999999999876
No 41
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-33 Score=308.00 Aligned_cols=307 Identities=24% Similarity=0.374 Sum_probs=160.6
Q ss_pred cCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCC
Q 045449 72 LGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTL 151 (823)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~ 151 (823)
+..+++|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|+++. +| .+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~--------~~ 106 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS--------AL 106 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG--------GG
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch--------HH
Confidence 3456778888888888763 44 37778888888888888775443 7777778888887777763 22 23
Q ss_pred ccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCc
Q 045449 152 SKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALK 231 (823)
Q Consensus 152 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 231 (823)
..+++|++|+|++|++++. +. +..+++|++|++++|.....++. +..+++|+
T Consensus 107 ~~l~~L~~L~l~~n~i~~~-~~--------------------------~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~ 158 (347)
T 4fmz_A 107 QNLTNLRELYLNEDNISDI-SP--------------------------LANLTKMYSLNLGANHNLSDLSP-LSNMTGLN 158 (347)
T ss_dssp TTCTTCSEEECTTSCCCCC-GG--------------------------GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCC
T ss_pred cCCCcCCEEECcCCcccCc-hh--------------------------hccCCceeEEECCCCCCcccccc-hhhCCCCc
Confidence 6677777777777776521 11 22334445555555543332222 44455555
Q ss_pred EEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCc
Q 045449 232 EISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADN 311 (823)
Q Consensus 232 ~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 311 (823)
+|++++|.++ +..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|
T Consensus 159 ~L~l~~~~~~-------------------------~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 209 (347)
T 4fmz_A 159 YLTVTESKVK-------------------------DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVN 209 (347)
T ss_dssp EEECCSSCCC-------------------------CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred EEEecCCCcC-------------------------Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccC
Confidence 5555555544 2211 3334444444444444433221 333334444444444
Q ss_pred cccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcC
Q 045449 312 YLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNL 391 (823)
Q Consensus 312 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (823)
.+++.. .+..+++|+.|++++|.+++ ..+ +..+++|++|++++|++
T Consensus 210 ~l~~~~-------~~~~~~~L~~L~l~~n~l~~-------------------------~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 210 QITDIT-------PVANMTRLNSLKIGNNKITD-------------------------LSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp CCCCCG-------GGGGCTTCCEEECCSSCCCC-------------------------CGG--GTTCTTCCEEECCSSCC
T ss_pred CCCCCc-------hhhcCCcCCEEEccCCccCC-------------------------Ccc--hhcCCCCCEEECCCCcc
Confidence 333321 13333333444444443332 211 34444555555555555
Q ss_pred CCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhh
Q 045449 392 TGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTI 471 (823)
Q Consensus 392 ~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 471 (823)
++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|.+++..|..++.+++|+.|+|++|++++..| +
T Consensus 256 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~ 329 (347)
T 4fmz_A 256 SDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--L 329 (347)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--G
T ss_pred CCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--h
Confidence 432 2345555555555555555543 234555555555555555555555555555566666666666555444 5
Q ss_pred hccCCCcEEeccccccc
Q 045449 472 WNLKDILFIDVSSNFLD 488 (823)
Q Consensus 472 ~~l~~L~~LdLs~N~l~ 488 (823)
..+++|+.||+++|.++
T Consensus 330 ~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 330 ASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGCTTCSEESSSCC---
T ss_pred hhhhccceeehhhhccc
Confidence 55666666666666553
No 42
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-33 Score=314.39 Aligned_cols=311 Identities=15% Similarity=0.108 Sum_probs=266.1
Q ss_pred cchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeE
Q 045449 203 LPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDL 282 (823)
Q Consensus 203 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 282 (823)
++++++|++++|.++...+..|.++++|++|+|++|.+++..+..+ ..+++|++|+|++|++++..|..|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAF-AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTT-TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhc-cCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 4567889999999987766678889999999999999985444444 459999999999999998888889999999999
Q ss_pred EeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEe
Q 045449 283 ELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILM 362 (823)
Q Consensus 283 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L 362 (823)
+|++|+++...+..|..+++|++|++++|.+++. .+..+..+++|+.|++++|.+++.. +..+ ++|++|++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l-~~L~~L~l 193 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI-----EDDTFQATTSLQNLQLSSNRLTHVD---LSLI-PSLFHANV 193 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC-----CTTTTSSCTTCCEEECCSSCCSBCC---GGGC-TTCSEEEC
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc-----ChhhccCCCCCCEEECCCCcCCccc---cccc-cccceeec
Confidence 9999999977667789999999999999999887 3456889999999999999998762 4455 68999999
Q ss_pred cCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccc
Q 045449 363 ANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS 442 (823)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 442 (823)
++|.+++. ...++|+.|++++|+++.. |.. ..++|+.|++++|++++. ..+..+++|+.|+|++|.+++.
T Consensus 194 ~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~ 263 (390)
T 3o6n_A 194 SYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKI 263 (390)
T ss_dssp CSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEE
T ss_pred cccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCc
Confidence 99998854 3346899999999999854 443 357999999999999975 5789999999999999999999
Q ss_pred ccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCc
Q 045449 443 IPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEG 522 (823)
Q Consensus 443 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g 522 (823)
.|..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ .+|..+..++.|+.|++++|++++. |
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~------ 334 (390)
T 3o6n_A 264 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K------ 334 (390)
T ss_dssp ESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C------
T ss_pred ChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C------
Confidence 99999999999999999999998 5667788999999999999998 5677889999999999999999842 2
Q ss_pred cCCCCCCCCCCCcccccCCcccCC
Q 045449 523 EIPRGGPFANLTAKSFMGNELLCG 546 (823)
Q Consensus 523 ~ip~~~~~~~~~~~~~~~n~~~c~ 546 (823)
...+..+..+.+.+|++.|.
T Consensus 335 ----~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 335 ----LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp ----CCTTCCCSEEECCSSCEEHH
T ss_pred ----chhhccCCEEEcCCCCccch
Confidence 23356778889999998875
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.6e-34 Score=332.60 Aligned_cols=311 Identities=14% Similarity=0.104 Sum_probs=265.5
Q ss_pred chhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEE
Q 045449 204 PYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLE 283 (823)
Q Consensus 204 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 283 (823)
++++.|++++|.++...+..|.++++|++|+|++|.+++..|..+. .+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhc-CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 4567888999998877777788899999999999999865555554 489999999999999988888889999999999
Q ss_pred eecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEec
Q 045449 284 LGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMA 363 (823)
Q Consensus 284 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~ 363 (823)
|++|.+++..+..|+++++|++|+|++|.+++. .+..|.++++|+.|++++|.+++.. +..+ ++|++|+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l-~~L~~L~l~ 200 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI-----EDDTFQATTSLQNLQLSSNRLTHVD---LSLI-PSLFHANVS 200 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC-----CTTTTTTCTTCCEEECTTSCCSBCC---GGGC-TTCSEEECC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCC-----ChhhhhcCCcCcEEECcCCCCCCcC---hhhh-hhhhhhhcc
Confidence 999999987777789999999999999999887 4457888999999999999998763 3445 689999999
Q ss_pred CCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccc
Q 045449 364 NCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSI 443 (823)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 443 (823)
+|.+++. ....+|+.|++++|.++.. |..+ .++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+
T Consensus 201 ~n~l~~l-----~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~ 270 (597)
T 3oja_B 201 YNLLSTL-----AIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIM 270 (597)
T ss_dssp SSCCSEE-----ECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEE
T ss_pred cCccccc-----cCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCC
Confidence 9998863 3456899999999999854 3333 36899999999999974 67899999999999999999999
Q ss_pred cccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCcc
Q 045449 444 PSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGE 523 (823)
Q Consensus 444 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ 523 (823)
|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..++.|+.|++++|++++. |
T Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~------- 340 (597)
T 3oja_B 271 YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K------- 340 (597)
T ss_dssp SGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C-------
T ss_pred HHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C-------
Confidence 9999999999999999999998 5777788999999999999999 6888899999999999999999843 2
Q ss_pred CCCCCCCCCCCcccccCCcccCCC
Q 045449 524 IPRGGPFANLTAKSFMGNELLCGL 547 (823)
Q Consensus 524 ip~~~~~~~~~~~~~~~n~~~c~~ 547 (823)
...+..+..+.+.+|++.|..
T Consensus 341 ---~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 341 ---LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp ---CCTTCCCSEEECCSSCEEHHH
T ss_pred ---hhhcCCCCEEEeeCCCCCChh
Confidence 123567788899999998864
No 44
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=8.3e-33 Score=300.12 Aligned_cols=289 Identities=21% Similarity=0.256 Sum_probs=234.5
Q ss_pred chhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEE
Q 045449 204 PYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLE 283 (823)
Q Consensus 204 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 283 (823)
.+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..+. .+++|++|+|++|++++..|..|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFK-GLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhh-CCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 46888899999888 4565553 6889999999998854444444 588999999999999988888899999999999
Q ss_pred eecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCC--ccCCccccccccccceEE
Q 045449 284 LGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLD--GILPKSIGNFSLSLETIL 361 (823)
Q Consensus 284 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~~~~~L~~L~ 361 (823)
|++|+++. +|..+. ++|++|++++|.++..+ +..+.++++|+.|++++|.++ +..|..+..+ +|++|+
T Consensus 109 L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~-----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l--~L~~L~ 178 (332)
T 2ft3_A 109 ISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVP-----KGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL--KLNYLR 178 (332)
T ss_dssp CCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCC-----SGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC--CCSCCB
T ss_pred CCCCcCCc-cCcccc--ccCCEEECCCCccCccC-----HhHhCCCccCCEEECCCCccccCCCCcccccCC--ccCEEE
Confidence 99999884 454444 78999999999988763 345788899999999999986 4677777765 799999
Q ss_pred ecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcc
Q 045449 362 MANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSG 441 (823)
Q Consensus 362 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 441 (823)
+++|++++ +|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 179 l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 254 (332)
T 2ft3_A 179 ISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS- 254 (332)
T ss_dssp CCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-
Confidence 99999886 455443 68899999999999888888899999999999999999888888889999999999999998
Q ss_pred cccccccCCCCCCeEeccCCccccccchhhhcc------CCCcEEeccccccc--cccCccccCCCCCcEEEcccCC
Q 045449 442 SIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNL------KDILFIDVSSNFLD--GPLSLDIGNLKVVIGLDFSRNN 510 (823)
Q Consensus 442 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~LdLs~N~l~--g~~p~~~~~l~~L~~L~ls~N~ 510 (823)
.+|..+..+++|+.|++++|++++..+..+... ..|+.|++++|.+. +..|..+..++.|+.+++++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 788888899999999999999998777776553 67889999999887 5667778889999999998874
No 45
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.3e-36 Score=345.71 Aligned_cols=290 Identities=18% Similarity=0.155 Sum_probs=169.7
Q ss_pred cccccCCCCCcEEEccCCcccccCCccc----ccCCCCccEEEeeccccccc----cCccccCCCCCCeEEeeccccccc
Q 045449 221 PVTIFNMSALKEISLLNNSLSGSLPSRI----DLSLPNVETLNLGINSFSGT----IPSSITNSSKLSDLELGENLFSGF 292 (823)
Q Consensus 221 p~~~~~l~~L~~L~Ls~N~l~g~lp~~~----~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 292 (823)
+..+..+++|++|+|++|.+++..+..+ ....++|++|+|++|++++. ++..+..+++|++|++++|.+++.
T Consensus 106 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEA 185 (461)
T ss_dssp HHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchH
Confidence 4444555555555555555543222211 11234566666666655542 244445556666666666666544
Q ss_pred CCCccC-----CCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCC-----ccccccccccceEEe
Q 045449 293 IPNTIG-----NLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILP-----KSIGNFSLSLETILM 362 (823)
Q Consensus 293 ~p~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-----~~~~~~~~~L~~L~L 362 (823)
.+..+. ..++|++|++++|.++..... .++..+..+++|+.|++++|.+++... ..+..+ .+|++|++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~-~~L~~L~L 263 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCR-DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPS-SRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH-HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTT-CCCCEEEC
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHH-HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCC-CCceEEEC
Confidence 333332 244666666666666543110 123445566667777777776654321 111123 56777777
Q ss_pred cCCcceec----cCccccCcccccEEEcccCcCCCCchhcccc-----cCCCCEEEccCCCCCCc----chHhhhcCCCC
Q 045449 363 ANCSISGN----IPQVVGNLSNLLVLELGGNNLTGPIPVTFSQ-----LQTLQAFDLTRNKLAGP----ITDELCHLARL 429 (823)
Q Consensus 363 ~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 429 (823)
++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|.+++. ++..+..+++|
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 77777654 4556666777777778777776544443332 25778888888877765 45556667778
Q ss_pred CEEEcccCcCcccccccccC-----CCCCCeEeccCCcccc----ccchhhhccCCCcEEeccccccccccCcccc----
Q 045449 430 HSLVLQGNKFSGSIPSCLGN-----LTSVRVLYLGLNIFTS----VLSSTIWNLKDILFIDVSSNFLDGPLSLDIG---- 496 (823)
Q Consensus 430 ~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~---- 496 (823)
++|+|++|.+++..+..+.. .++|+.|+|++|.+++ .+|..+..+++|++||+++|.+++.-...+.
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~ 423 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVR 423 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHT
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhc
Confidence 88888888777665544432 5678888888888776 6777777778888888888877764221111
Q ss_pred -CCCCCcEEEcccCCCC
Q 045449 497 -NLKVVIGLDFSRNNLS 512 (823)
Q Consensus 497 -~l~~L~~L~ls~N~l~ 512 (823)
....|+.|++.++.+.
T Consensus 424 ~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 424 QPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp STTCCCCEEECTTCCCC
T ss_pred cCCcchhheeecccccC
Confidence 2335666766666554
No 46
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.9e-32 Score=297.35 Aligned_cols=214 Identities=19% Similarity=0.257 Sum_probs=117.8
Q ss_pred EEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccc
Q 045449 55 IGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSIN 134 (823)
Q Consensus 55 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 134 (823)
+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 36 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 36 RVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred CEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 34555566665 4555553 57788888888887666777778888888888888877777777777777777777777
Q ss_pred cccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccc
Q 045449 135 RLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATN 214 (823)
Q Consensus 135 ~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N 214 (823)
+++ .+|..+ . ++|++|++++|++++..+. .|.++++|++|++++|
T Consensus 113 ~l~-~l~~~~-------~--~~L~~L~l~~n~i~~~~~~-------------------------~~~~l~~L~~L~l~~n 157 (332)
T 2ft3_A 113 HLV-EIPPNL-------P--SSLVELRIHDNRIRKVPKG-------------------------VFSGLRNMNCIEMGGN 157 (332)
T ss_dssp CCC-SCCSSC-------C--TTCCEEECCSSCCCCCCSG-------------------------GGSSCSSCCEEECCSC
T ss_pred cCC-ccCccc-------c--ccCCEEECCCCccCccCHh-------------------------HhCCCccCCEEECCCC
Confidence 776 444433 2 5677777777766532221 2333444555556665
Q ss_pred ccc--CCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeeccccccc
Q 045449 215 NLV--GVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGF 292 (823)
Q Consensus 215 ~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 292 (823)
.++ +..|..+..+ +|++|++++|.++ .+|..+. ++|++|+|++|++++..|..+.++++|++|+|++|++++.
T Consensus 158 ~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 158 PLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp CCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred ccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 554 2444444444 5555555555554 2443321 3344444444444433333444444444444444444433
Q ss_pred CCCccCCCcccCcccccCc
Q 045449 293 IPNTIGNLRNLEFGNIADN 311 (823)
Q Consensus 293 ~p~~~~~l~~L~~L~L~~N 311 (823)
.+..|..+++|++|+|++|
T Consensus 233 ~~~~~~~l~~L~~L~L~~N 251 (332)
T 2ft3_A 233 ENGSLSFLPTLRELHLDNN 251 (332)
T ss_dssp CTTGGGGCTTCCEEECCSS
T ss_pred ChhHhhCCCCCCEEECCCC
Confidence 3333333333333333333
No 47
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.1e-36 Score=346.23 Aligned_cols=398 Identities=19% Similarity=0.150 Sum_probs=246.2
Q ss_pred CcEEEEEcCCCCCccccCcc-cCCCCCCcEEEccCCCCCC----CCCCCCCCCCCCCEEECCCCcCcCCCchhhh-cCC-
Q 045449 52 HRVIGLNISSFNLQGTITPQ-LGNLSSLQTLDLSHNKLSG----NIPSSIFNMHTLKLLDFSDNQLFGSLSSFIF-NMS- 124 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~~~~~-l~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~- 124 (823)
.+++.|||++++++...... +..+++|++|+|++|+++. .++..+..+++|++|||++|.+++..+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 36888999999887544333 6778889999999999874 3566777888999999999988765554443 455
Q ss_pred ---CCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccC
Q 045449 125 ---SMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIG 201 (823)
Q Consensus 125 ---~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~ 201 (823)
+|++|+|++|+++..- +..+|..+..+++|++|+|++|.+++..+..+.. . .+.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~---~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~------~--------------l~~ 139 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAG---CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE------G--------------LLD 139 (461)
T ss_dssp TTCCCCEEECTTSCCBGGG---HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH------H--------------HTS
T ss_pred CCCceeEEEccCCCCCHHH---HHHHHHHHccCCceeEEECCCCcCchHHHHHHHH------H--------------Hhc
Confidence 6999999999887321 1112333478888999999999876433222210 0 012
Q ss_pred CcchhhhhccccccccCCc----cccccCCCCCcEEEccCCcccccCCcccc----cCCCCccEEEeeccccccc----c
Q 045449 202 NLPYLARLALATNNLVGVV----PVTIFNMSALKEISLLNNSLSGSLPSRID----LSLPNVETLNLGINSFSGT----I 269 (823)
Q Consensus 202 ~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~----~~l~~L~~L~Ls~N~l~~~----~ 269 (823)
..++|++|+|++|++++.. +..+..+++|++|++++|.+++..+..+. ...++|++|+|++|.+++. +
T Consensus 140 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 219 (461)
T 1z7x_W 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH
T ss_pred CCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH
Confidence 3446788888888887643 45556677888888888877643333222 1345777777777777653 4
Q ss_pred CccccCCCCCCeEEeecccccccC-----CCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCc
Q 045449 270 PSSITNSSKLSDLELGENLFSGFI-----PNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDG 344 (823)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 344 (823)
+..+..+++|++|++++|.+++.. +..+..+++|++|++++|.++..... .++..+..+++|+.|++++|.+++
T Consensus 220 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG-DLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH-HHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHH-HHHHHHhhCCCcceEECCCCCCch
Confidence 666666777777777777766432 22223455555555555555432100 012233444455555555554443
Q ss_pred cCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCC----chhcccccCCCCEEEccCCCCCCcch
Q 045449 345 ILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGP----IPVTFSQLQTLQAFDLTRNKLAGPIT 420 (823)
Q Consensus 345 ~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~p 420 (823)
..+..+... .....++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+
T Consensus 299 ~~~~~l~~~--------------------l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 299 EGARLLCET--------------------LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHHHHHH--------------------HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHHHHHHHH--------------------hccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 222222111 001124677777777777654 45556666777777777777776555
Q ss_pred Hhhhc-----CCCCCEEEcccCcCcc----cccccccCCCCCCeEeccCCccccccchhhh-----ccCCCcEEeccccc
Q 045449 421 DELCH-----LARLHSLVLQGNKFSG----SIPSCLGNLTSVRVLYLGLNIFTSVLSSTIW-----NLKDILFIDVSSNF 486 (823)
Q Consensus 421 ~~~~~-----l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~LdLs~N~ 486 (823)
..++. .++|+.|+|++|.+++ .+|..+..+++|++|+|++|++++.....+. ....|+.|++.++.
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~ 438 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIY 438 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCC
T ss_pred HHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccc
Confidence 54443 5677777777777775 6677777777777777777777764333322 12357777777776
Q ss_pred cccccCc
Q 045449 487 LDGPLSL 493 (823)
Q Consensus 487 l~g~~p~ 493 (823)
+....+.
T Consensus 439 ~~~~~~~ 445 (461)
T 1z7x_W 439 WSEEMED 445 (461)
T ss_dssp CCHHHHH
T ss_pred cCHHHHH
Confidence 6654443
No 48
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.7e-32 Score=293.96 Aligned_cols=291 Identities=22% Similarity=0.238 Sum_probs=207.0
Q ss_pred cchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeE
Q 045449 203 LPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDL 282 (823)
Q Consensus 203 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 282 (823)
..+++.++++++.++. +|..+. +.+++|+|++|.+++ ++...+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 30 ~c~l~~l~~~~~~l~~-lp~~~~--~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEK-VPKDLP--PDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERL 105 (330)
T ss_dssp EEETTEEECTTSCCCS-CCCSCC--TTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred cCCCeEEEecCCCccc-cCccCC--CCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEE
Confidence 3466777777777773 454443 567778888888774 443333347788888888888877777778888888888
Q ss_pred EeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCc--cCCccccccccccceE
Q 045449 283 ELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDG--ILPKSIGNFSLSLETI 360 (823)
Q Consensus 283 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~~~L~~L 360 (823)
+|++|+++. +|..+. ++|++|++++|.+++. .+..+.++++|+.|++++|.+.. ..+..+..+ ++|++|
T Consensus 106 ~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~~L~~L 176 (330)
T 1xku_A 106 YLSKNQLKE-LPEKMP--KTLQELRVHENEITKV-----RKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM-KKLSYI 176 (330)
T ss_dssp ECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBB-----CHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC-TTCCEE
T ss_pred ECCCCcCCc-cChhhc--ccccEEECCCCccccc-----CHhHhcCCccccEEECCCCcCCccCcChhhccCC-CCcCEE
Confidence 888887774 344433 6777888888877765 34457777788888888887753 566677777 678888
Q ss_pred EecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCc
Q 045449 361 LMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFS 440 (823)
Q Consensus 361 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 440 (823)
++++|.++. +|..+. ++|++|++++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+++
T Consensus 177 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 177 RIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 888887774 444433 67888888888887777777788888888888888887776767777888888888888887
Q ss_pred ccccccccCCCCCCeEeccCCccccccchhhhc------cCCCcEEecccccccc--ccCccccCCCCCcEEEcccCC
Q 045449 441 GSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWN------LKDILFIDVSSNFLDG--PLSLDIGNLKVVIGLDFSRNN 510 (823)
Q Consensus 441 g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~LdLs~N~l~g--~~p~~~~~l~~L~~L~ls~N~ 510 (823)
.+|..+..+++|++|+|++|++++..+..|.. ...|+.|++++|.+.. ..|..+..+..++.+++++|+
T Consensus 254 -~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 254 -KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp -SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred -cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 67777777888888888888887766666543 3667788888887763 445667777888888888774
No 49
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.9e-32 Score=292.15 Aligned_cols=244 Identities=21% Similarity=0.289 Sum_probs=177.1
Q ss_pred EEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEeccccc
Q 045449 56 GLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINR 135 (823)
Q Consensus 56 ~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 135 (823)
.+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 35 ~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 3444455555 4555443 689999999999998888899999999999999999998889999999999999999999
Q ss_pred ccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhcccccc
Q 045449 136 LSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNN 215 (823)
Q Consensus 136 l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~ 215 (823)
++ .+|..+ . ++|++|++++|++++..+.. |.++++|++|++++|+
T Consensus 112 l~-~l~~~~-------~--~~L~~L~l~~n~l~~~~~~~-------------------------~~~l~~L~~L~l~~n~ 156 (330)
T 1xku_A 112 LK-ELPEKM-------P--KTLQELRVHENEITKVRKSV-------------------------FNGLNQMIVVELGTNP 156 (330)
T ss_dssp CS-BCCSSC-------C--TTCCEEECCSSCCCBBCHHH-------------------------HTTCTTCCEEECCSSC
T ss_pred CC-ccChhh-------c--ccccEEECCCCcccccCHhH-------------------------hcCCccccEEECCCCc
Confidence 87 455433 2 68999999999887543322 3455667788888888
Q ss_pred ccC--CccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccC
Q 045449 216 LVG--VVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFI 293 (823)
Q Consensus 216 l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 293 (823)
++. ..+..+.++++|++|++++|.++ .+|..+. ++|++|+|++|++++..|..+.++++|++|+|++|++++..
T Consensus 157 l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 232 (330)
T 1xku_A 157 LKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD 232 (330)
T ss_dssp CCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEEC
T ss_pred CCccCcChhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeC
Confidence 853 66777778888888888888887 5665543 57777777777777777777777777777777777777766
Q ss_pred CCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCC
Q 045449 294 PNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILP 347 (823)
Q Consensus 294 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 347 (823)
+..|..+++|++|+|++|+++.. +..+..+++|++|++++|++++..+
T Consensus 233 ~~~~~~l~~L~~L~L~~N~l~~l------p~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 233 NGSLANTPHLRELHLNNNKLVKV------PGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp TTTGGGSTTCCEEECCSSCCSSC------CTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred hhhccCCCCCCEEECCCCcCccC------ChhhccCCCcCEEECCCCcCCccCh
Confidence 66666666666666666666532 3344555555555555555554433
No 50
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.97 E-value=8.4e-34 Score=299.50 Aligned_cols=151 Identities=30% Similarity=0.435 Sum_probs=133.6
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||+|+ |+.||||++.+.. ....+.+.+|++++++++|||||+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999997 6779999997543 233468999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
+++|++.+|+|+|+++|+||||||+|||++.++.+||+|||+|+.+.........
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~ 191 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence 4789999999999999999999999999999999999999999987654443445
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|||||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5678999999999999999999999999999999999999999764
No 51
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=2.5e-34 Score=337.54 Aligned_cols=438 Identities=14% Similarity=0.088 Sum_probs=302.1
Q ss_pred CCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCC---CCCCCCCCC------------CCCCC
Q 045449 38 SVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKL---SGNIPSSIF------------NMHTL 102 (823)
Q Consensus 38 ~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l---~g~~p~~~~------------~l~~L 102 (823)
-|++|.++.+.. . ..+.+.. .....++..+..+++|++|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~--~--~~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSET--R--EHVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHH--C--CEEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhcc--c--cEEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 355899996532 1 2233332 23333444567788999999988543 245665555 68999
Q ss_pred CEEECCCCcCcCCCchhhhcC--CCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchh
Q 045449 103 KLLDFSDNQLFGSLSSFIFNM--SSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTK 180 (823)
Q Consensus 103 ~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 180 (823)
++|+|++|.+++..+..+... .+|++|+|++|.-. .+..+ +....++++|++|+|++|.+++.-..++.
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~--~~~~l---~~~~~~~~~L~~L~L~~~~~~~~~~~~l~---- 185 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF--TTDGL---LSIVTHCRKIKTLLMEESSFSEKDGKWLH---- 185 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE--EHHHH---HHHHHHCTTCSEEECTTCEEECCCSHHHH----
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc--CHHHH---HHHHhhCCCCCEEECccccccCcchhHHH----
Confidence 999999999988878877764 45999999998721 11111 11125789999999999998754322211
Q ss_pred hHHHHHhhcCCCcccCCcccCCcchhhhhccccccccC----CccccccCCCCCcEEEccCCcccccCCcccccCCCCcc
Q 045449 181 LKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVG----VVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVE 256 (823)
Q Consensus 181 L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~ 256 (823)
. .+.++++|++|+++.|.+++ .++..+.++++|++|+|++|.+.+ +|..+.. +++|+
T Consensus 186 --~---------------~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~-~~~L~ 246 (592)
T 3ogk_B 186 --E---------------LAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA-AANLE 246 (592)
T ss_dssp --H---------------HHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH-CTTCC
T ss_pred --H---------------HHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh-hhHHH
Confidence 1 12345677888888888873 344455678888888888888874 6655544 88888
Q ss_pred EEEeeccccc---cccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCce
Q 045449 257 TLNLGINSFS---GTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK 333 (823)
Q Consensus 257 ~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 333 (823)
+|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++.. ....+..+++|+
T Consensus 247 ~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~----~~~~~~~~~~L~ 321 (592)
T 3ogk_B 247 EFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETED----HCTLIQKCPNLE 321 (592)
T ss_dssp EEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHH----HHHHHTTCTTCC
T ss_pred hhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHH----HHHHHHhCcCCC
Confidence 8888754332 3445567778888888888753 3456777788888888888888865431 223457788888
Q ss_pred EEEeecCCCCccCCccccccccccceEEec-----------CCcceecc-CccccCcccccEEEcccCcCCCCchhcccc
Q 045449 334 VLIVTGNPLDGILPKSIGNFSLSLETILMA-----------NCSISGNI-PQVVGNLSNLLVLELGGNNLTGPIPVTFSQ 401 (823)
Q Consensus 334 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~-----------~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 401 (823)
.|+++++...+.++..+..+ ++|++|+++ .|.+++.. +..+..+++|++|+++.|++++..+..+..
T Consensus 322 ~L~L~~~~~~~~l~~~~~~~-~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 322 VLETRNVIGDRGLEVLAQYC-KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp EEEEEGGGHHHHHHHHHHHC-TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred EEeccCccCHHHHHHHHHhC-CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 88888433333333333445 678888888 35666442 333456788888888888888777776665
Q ss_pred -cCCCCEEEcc----CCCCCCc-----chHhhhcCCCCCEEEcccC--cCcccccccccC-CCCCCeEeccCCccccc-c
Q 045449 402 -LQTLQAFDLT----RNKLAGP-----ITDELCHLARLHSLVLQGN--KFSGSIPSCLGN-LTSVRVLYLGLNIFTSV-L 467 (823)
Q Consensus 402 -l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~g~~p~~~~~-l~~L~~L~Ls~N~l~~~-~ 467 (823)
+++|+.|+++ .|++++. ++..+.++++|+.|+|+++ .+++..+..+.. +++|+.|+|++|.+++. +
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 480 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHH
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHH
Confidence 8888888885 7788864 4555677888888888743 366665555543 78888889988888773 4
Q ss_pred chhhhccCCCcEEeccccccccc-cCccccCCCCCcEEEcccCCCCCC
Q 045449 468 SSTIWNLKDILFIDVSSNFLDGP-LSLDIGNLKVVIGLDFSRNNLSGD 514 (823)
Q Consensus 468 p~~~~~l~~L~~LdLs~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~ 514 (823)
+..+..+++|+.|++++|.+++. ++..+..++.|++|++++|++++.
T Consensus 481 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 481 MEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 55567788888999998888765 344456788888899998888764
No 52
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.97 E-value=5.4e-33 Score=294.14 Aligned_cols=151 Identities=27% Similarity=0.392 Sum_probs=122.2
Q ss_pred ccCCccceeeccC---------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 628 DRFSENNLIGIGN---------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
+++...+.||+|+ ...||||+++.. .....++|.+|++++++++|||||+
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~g 115 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEG 115 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCC
Confidence 4566678899987 335899998633 2455688999999999999999998
Q ss_pred ---------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccccc
Q 045449 678 ---------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTL 736 (823)
Q Consensus 678 ---------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 736 (823)
++.|++.+|+|+|+++||||||||+|||+++++.+||+|||+|+..............+
T Consensus 116 GsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~ 195 (307)
T 3omv_A 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT 195 (307)
T ss_dssp CBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CC
T ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccc
Confidence 46788999999999999999999999999999999999999999765443333345678
Q ss_pred cCCCcCcccccCC---CccccccceehhhhhhccccCCCCCcCCC
Q 045449 737 ATIGYMAPEYGTK---GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 737 gt~~y~aPE~~~~---~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
||+.|||||++.+ +.|+.++|||||||++||+++|+.||.+.
T Consensus 196 GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~ 240 (307)
T 3omv_A 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240 (307)
T ss_dssp CCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC
Confidence 9999999999853 46899999999999999999999999764
No 53
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.97 E-value=2.1e-33 Score=300.91 Aligned_cols=149 Identities=25% Similarity=0.299 Sum_probs=130.8
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
+.|+..+.||+|+ |+.||||++........+.+.+|++++++++|||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4577778899986 6779999997655444567899999999999999998
Q ss_pred ---------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccccc
Q 045449 678 ---------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTL 736 (823)
Q Consensus 678 ---------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 736 (823)
++.|++.+|+|+|+.+||||||||+|||++.++.+||+|||+|+.+..... .....+
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~ 231 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLV 231 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--CBCCCC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--cccccc
Confidence 468999999999999999999999999999999999999999998754332 234678
Q ss_pred cCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 737 ATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 737 gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
||+.|||||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 273 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999999999999999999999999764
No 54
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.97 E-value=3.1e-33 Score=296.01 Aligned_cols=151 Identities=25% Similarity=0.340 Sum_probs=128.7
Q ss_pred cCCccceeeccC-----------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 629 RFSENNLIGIGN-----------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 629 ~f~~~~~lg~g~-----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
+|...+.||+|+ +..||||+++.......++|.+|++++++++|||||+
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 455567777775 3569999998776777789999999999999999998
Q ss_pred ---------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecc
Q 045449 678 ---------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFG 718 (823)
Q Consensus 678 ---------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfG 718 (823)
++.|++++|+|+|+++||||||||+|||++.++.+||+|||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcc
Confidence 24588889999999999999999999999999999999999
Q ss_pred cccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 719 IAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 719 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
+|+.....+.........||+.|||||++.++.|+.++|||||||++||+++ |+.||.+..
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9997655444333445679999999999999999999999999999999998 899997753
No 55
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=8.7e-31 Score=286.76 Aligned_cols=278 Identities=17% Similarity=0.168 Sum_probs=205.8
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCccc
Q 045449 228 SALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGN 307 (823)
Q Consensus 228 ~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 307 (823)
+.....++++|.++ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 33445666777776 6666543 4677777777777765555677777777777777777777777777777777777
Q ss_pred ccCccccCCCCcccccccccCCCCceEEEeecCCCCccCC-ccccccccccceEEecCC-cceeccCccccCcccccEEE
Q 045449 308 IADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILP-KSIGNFSLSLETILMANC-SISGNIPQVVGNLSNLLVLE 385 (823)
Q Consensus 308 L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~ 385 (823)
|++|++++. .+..+.++++|++|++++|++++..+ ..+..+ ++|++|++++| .+++..+..|.++++|++|+
T Consensus 107 Ls~n~l~~~-----~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 107 LSYNYLSNL-----SSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHL-TKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp CCSSCCSSC-----CHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTC-TTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCCCcCCcC-----CHhHhCCCccCCEEECCCCCCcccCchhhhccC-CCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 777777765 22346677777777777777775443 356666 67888888877 46666677788888888888
Q ss_pred cccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccccccccc---CCCCCCeEeccCCc
Q 045449 386 LGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLG---NLTSVRVLYLGLNI 462 (823)
Q Consensus 386 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---~l~~L~~L~Ls~N~ 462 (823)
+++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|+|++|.+++..+..+. ..+.++.++|++|.
T Consensus 181 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~ 260 (353)
T 2z80_A 181 IDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVK 260 (353)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCB
T ss_pred CCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccccc
Confidence 888888877788888888888888888888754444455678888888888888876655443 35667888888888
Q ss_pred ccc----ccchhhhccCCCcEEeccccccccccCcc-ccCCCCCcEEEcccCCCCCCCC
Q 045449 463 FTS----VLSSTIWNLKDILFIDVSSNFLDGPLSLD-IGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 463 l~~----~~p~~~~~l~~L~~LdLs~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~ip 516 (823)
+++ .+|..+..+++|+.||+++|.++ .+|.. ++.++.|++|++++|+++|.+|
T Consensus 261 l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 261 ITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 877 36788889999999999999998 56655 5889999999999999998776
No 56
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.97 E-value=4.3e-33 Score=299.06 Aligned_cols=149 Identities=21% Similarity=0.329 Sum_probs=127.2
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||+|+ |+.||||++.... ....+.|.+|++++++++|||||+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6788888999986 6779999996432 445678999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+++||||||||+|||++.++.+||+|||+|+...... ..
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 181 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--EL 181 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--HH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--cc
Confidence 46799999999999999999999999999999999999999999764321 12
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|||||++.+..|+.++||||+||++|+|++|+.||.+.
T Consensus 182 ~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 228 (350)
T 4b9d_A 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228 (350)
T ss_dssp HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 34568999999999999999999999999999999999999999764
No 57
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.97 E-value=8.3e-33 Score=296.83 Aligned_cols=151 Identities=25% Similarity=0.351 Sum_probs=120.7
Q ss_pred cCCccceeeccC-----------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 629 RFSENNLIGIGN-----------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 629 ~f~~~~~lg~g~-----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
+|...+.||+|+ ++.||||+++.......++|.+|++++++++|||||+
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 455566778775 3569999998777777789999999999999999998
Q ss_pred -----------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEee
Q 045449 678 -----------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISD 716 (823)
Q Consensus 678 -----------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~D 716 (823)
++.|++.+|+|+|+++||||||||+|||++.++.+||+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcc
Confidence 245788899999999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 717 FGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 717 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
||+|+.....+........+||+.|||||++.+..|+.++|||||||++||+++ |+.||.+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~ 265 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC
Confidence 999997755444444455789999999999999999999999999999999998 899997753
No 58
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=1.8e-32 Score=285.33 Aligned_cols=148 Identities=25% Similarity=0.418 Sum_probs=117.2
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||+|+ |+.||||++.... ....+.+.+|++++++++|||||+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999986 6779999996432 233467999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
+++|++.+|+|+|+++|+||||||+|||++.++.+||+|||+|+...... ...
T Consensus 93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~~ 169 (275)
T 3hyh_A 93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLK 169 (275)
T ss_dssp ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC---ccC
Confidence 47899999999999999999999999999999999999999998764332 234
Q ss_pred ccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..+||+.|||||++.+..| +.++||||+||++|+|++|+.||.+.
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~ 215 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC
Confidence 5789999999999998876 57999999999999999999999764
No 59
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.97 E-value=1.5e-32 Score=301.67 Aligned_cols=149 Identities=25% Similarity=0.299 Sum_probs=131.1
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
+.|...+.||+|+ |+.||||++........+.+.+|++++++++|||||+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4588888999996 6779999997554444567899999999999999998
Q ss_pred ---------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccccc
Q 045449 678 ---------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTL 736 (823)
Q Consensus 678 ---------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 736 (823)
++.|++.+|+|+|+.+||||||||+|||++.++.+||+|||+|+.+..... .....+
T Consensus 231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~ 308 (423)
T 4fie_A 231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLV 308 (423)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--CBCCCE
T ss_pred CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--cccccc
Confidence 468999999999999999999999999999999999999999998654332 235678
Q ss_pred cCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 737 ATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 737 gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
||+.|||||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 309 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 350 (423)
T 4fie_A 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350 (423)
T ss_dssp ECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999999999999999999999999764
No 60
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.97 E-value=7.8e-32 Score=283.12 Aligned_cols=143 Identities=28% Similarity=0.369 Sum_probs=121.6
Q ss_pred CccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 631 SENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 631 ~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
...+.||+|+ +..||||++.... ....+.|.+|++++++++|||||+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4456799986 5679999996443 445678999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCC--EEeccCCCCCEEeCC-CCcEEEeecccccccCCCCcc
Q 045449 678 -------------------------IISSSLEYLHFGHSIP--IIHCDLKPSNVLLDE-DMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~--ivHrdlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+++ ||||||||+|||++. ++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~--- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--- 185 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC---
Confidence 3678999999999988 999999999999984 789999999999864322
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|||||++.+ .|+.++|||||||++|+|++|+.||.+.
T Consensus 186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 2345689999999998864 6999999999999999999999999754
No 61
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.1e-30 Score=277.71 Aligned_cols=281 Identities=23% Similarity=0.225 Sum_probs=193.2
Q ss_pred hhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeecccccc--ccCccccCCCCCCeEEe
Q 045449 207 ARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSG--TIPSSITNSSKLSDLEL 284 (823)
Q Consensus 207 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L 284 (823)
+.++++++.++. +|..+. ++|++|+|++|.++ .+|..++..+++|++|+|++|+++. ..|..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCccc-CCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 356777777763 344332 57788888888877 6676655567788888888887763 33566667778888888
Q ss_pred ecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecC
Q 045449 285 GENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMAN 364 (823)
Q Consensus 285 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 364 (823)
++|.++. +|..+..+++|++|++++|.+++... ...+..+++|++|++++|.+++..|..+..+ ++|++|++++
T Consensus 86 s~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~ 159 (306)
T 2z66_A 86 SFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSE----FSVFLSLRNLIYLDISHTHTRVAFNGIFNGL-SSLEVLKMAG 159 (306)
T ss_dssp CSCSEEE-EEEEEETCTTCCEEECTTSEEESSTT----TTTTTTCTTCCEEECTTSCCEECSTTTTTTC-TTCCEEECTT
T ss_pred CCCcccc-ChhhcCCCCCCCEEECCCCccccccc----chhhhhccCCCEEECCCCcCCccchhhcccC-cCCCEEECCC
Confidence 8888774 45567777888888888887776532 1356677777777777777777777777766 5777777777
Q ss_pred Cccee-ccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccc
Q 045449 365 CSISG-NIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSI 443 (823)
Q Consensus 365 N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 443 (823)
|.+++ .+|..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..
T Consensus 160 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239 (306)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCS
T ss_pred CccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccC
Confidence 77776 56777777777777777777777666777777777777777777777666666777777777777777777777
Q ss_pred cccccCCC-CCCeEeccCCccccccc--hhhhccCCCcEEeccccccccccCccccC
Q 045449 444 PSCLGNLT-SVRVLYLGLNIFTSVLS--STIWNLKDILFIDVSSNFLDGPLSLDIGN 497 (823)
Q Consensus 444 p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~LdLs~N~l~g~~p~~~~~ 497 (823)
|..+..++ +|+.|+|++|.+++..+ .....+...+.+.+..+.+.+..|..+..
T Consensus 240 ~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 240 KQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp SSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred HHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 77777763 67777777777766432 11233344444555566666666655544
No 62
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=8.5e-30 Score=275.41 Aligned_cols=234 Identities=20% Similarity=0.248 Sum_probs=177.4
Q ss_pred CCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCc
Q 045449 253 PNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKL 332 (823)
Q Consensus 253 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L 332 (823)
++++.|+|++|+++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|.++. ++..+.++++|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~------lp~~l~~l~~L 152 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRA------LPASIASLNRL 152 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCC------CCGGGGGCTTC
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCcccc------CcHHHhcCcCC
Confidence 44555555555555 44555555555555555555555 455555555555555555555552 34456667777
Q ss_pred eEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccC
Q 045449 333 KVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTR 412 (823)
Q Consensus 333 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 412 (823)
++|++++|++.+.+|..+... ..+..|.++++|++|+|++|+++ .+|..+..+++|++|+|++
T Consensus 153 ~~L~L~~n~~~~~~p~~~~~~----------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~ 215 (328)
T 4fcg_A 153 RELSIRACPELTELPEPLAST----------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRN 215 (328)
T ss_dssp CEEEEEEETTCCCCCSCSEEE----------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEES
T ss_pred CEEECCCCCCccccChhHhhc----------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccC
Confidence 777777777777777665532 22345677888999999999988 7888888899999999999
Q ss_pred CCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccC
Q 045449 413 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLS 492 (823)
Q Consensus 413 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 492 (823)
|++++ +|..+..+++|++|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|||++|.+.+.+|
T Consensus 216 N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 216 SPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp SCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred CCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 99985 55578889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcEEEcccCCCC
Q 045449 493 LDIGNLKVVIGLDFSRNNLS 512 (823)
Q Consensus 493 ~~~~~l~~L~~L~ls~N~l~ 512 (823)
..+++++.|+.+++..|.+.
T Consensus 295 ~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 295 SLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GGGGGSCTTCEEECCGGGSC
T ss_pred HHHhhccCceEEeCCHHHHH
Confidence 99999999999999877665
No 63
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=2.2e-32 Score=292.28 Aligned_cols=147 Identities=23% Similarity=0.208 Sum_probs=122.8
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.+.|...+.||+|+ |+.||||+++.+. .+.+|++++++++|||||+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 35677778899986 6779999997542 2357999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC-cEEEeecccccccCCCCcc---c
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM-VAHISDFGIAKLLSGEDQL---S 730 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~~---~ 730 (823)
++.|++.+|+|+|+++||||||||+|||++.++ ++||+|||+|+.+...... .
T Consensus 132 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 468999999999999999999999999999887 6999999999986543221 1
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|||||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 123467999999999999999999999999999999999999999764
No 64
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.97 E-value=2.2e-32 Score=290.75 Aligned_cols=178 Identities=20% Similarity=0.208 Sum_probs=132.9
Q ss_pred eEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-------------------------------------------
Q 045449 642 MEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK------------------------------------------- 677 (823)
Q Consensus 642 ~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~------------------------------------------- 677 (823)
+.||||+++... ....++|.+|+.++++++|||||+
T Consensus 57 ~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~ 136 (308)
T 4gt4_A 57 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136 (308)
T ss_dssp EEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----C
T ss_pred eEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCcccccccccccc
Confidence 469999997543 234578999999999999999998
Q ss_pred -------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccccccCCCcCcc
Q 045449 678 -------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAP 744 (823)
Q Consensus 678 -------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 744 (823)
++.|++.+|+|+|+.+||||||||+|||+++++.+||+|||+|+.....+........+||+.||||
T Consensus 137 ~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 216 (308)
T 4gt4_A 137 TVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216 (308)
T ss_dssp CEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCH
Confidence 2457888999999999999999999999999999999999999977554444444567899999999
Q ss_pred cccCCCccccccceehhhhhhccccC-CCCCcCCCcccccccccccCCcccccccCCCcccccccccccccccccCC
Q 045449 745 EYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETCTPVRESKYEVHPATTTIMEHPLPRVGEVMDVDRGKARIQGK 820 (823)
Q Consensus 745 E~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (823)
|++.++.|+.++|||||||++||+++ |..||.+............ ....+.++...+.+.+++..+....+-+||
T Consensus 217 E~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~-~~~~~~p~~~~~~~~~li~~C~~~dP~~RP 292 (308)
T 4gt4_A 217 EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN-RQVLPCPDDCPAWVYALMIECWNEFPSRRP 292 (308)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCcccchHHHHHHHHHHcCCChhHCc
Confidence 99999999999999999999999998 7889977532211111100 011112334445555555555555444444
No 65
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.5e-30 Score=278.91 Aligned_cols=250 Identities=19% Similarity=0.228 Sum_probs=143.9
Q ss_pred cEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeeccccccc--CCCccCCCcccCcccc
Q 045449 231 KEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGF--IPNTIGNLRNLEFGNI 308 (823)
Q Consensus 231 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L 308 (823)
+.++++++.++ .+|..+ .++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|++|++
T Consensus 10 ~~l~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCC---CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 46777777777 677654 34677778877777754444567777777777777777632 2445555666666666
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEccc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGG 388 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 388 (823)
++|.++. ++..+..+++|+.|++++|.+++..+ ...+..+++|++|++++
T Consensus 86 s~n~i~~------l~~~~~~l~~L~~L~l~~n~l~~~~~------------------------~~~~~~l~~L~~L~l~~ 135 (306)
T 2z66_A 86 SFNGVIT------MSSNFLGLEQLEHLDFQHSNLKQMSE------------------------FSVFLSLRNLIYLDISH 135 (306)
T ss_dssp CSCSEEE------EEEEEETCTTCCEEECTTSEEESSTT------------------------TTTTTTCTTCCEEECTT
T ss_pred CCCcccc------ChhhcCCCCCCCEEECCCCccccccc------------------------chhhhhccCCCEEECCC
Confidence 6666554 23334455555555555555544332 03444555555555555
Q ss_pred CcCCCCchhcccccCCCCEEEccCCCCCC-cchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCcccccc
Q 045449 389 NNLTGPIPVTFSQLQTLQAFDLTRNKLAG-PITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVL 467 (823)
Q Consensus 389 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 467 (823)
|++++..+..+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|.+++..
T Consensus 136 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 136 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp SCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred CcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 55554445555555555555555555544 34445555555555555555555555555555555555555555555555
Q ss_pred chhhhccCCCcEEeccccccccccCccccCC-CCCcEEEcccCCCCCC
Q 045449 468 SSTIWNLKDILFIDVSSNFLDGPLSLDIGNL-KVVIGLDFSRNNLSGD 514 (823)
Q Consensus 468 p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l-~~L~~L~ls~N~l~g~ 514 (823)
+..+..+++|+.||+++|.+++..|..+..+ +.|++|++++|++++.
T Consensus 216 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 216 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 5555555555666666666655555555555 2566666666666544
No 66
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=283.26 Aligned_cols=280 Identities=18% Similarity=0.177 Sum_probs=236.0
Q ss_pred chhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEE
Q 045449 204 PYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLE 283 (823)
Q Consensus 204 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 283 (823)
+.....++++|+++. +|..+. ++|++|++++|.+++ +|...+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 31 ~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 31 DRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 334457888999984 565554 489999999999984 5554445599999999999999988889999999999999
Q ss_pred eecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecC-CCCccCCccccccccccceEEe
Q 045449 284 LGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGN-PLDGILPKSIGNFSLSLETILM 362 (823)
Q Consensus 284 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~~~~~L~~L~L 362 (823)
|++|++++..+..|+.+++|++|++++|+++..+. ...+.++++|+.|++++| .+.+..|..+..+ ++|++|++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~----~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l-~~L~~L~l 181 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE----TSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL-TFLEELEI 181 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCS----SCSCTTCTTCCEEEEEESSSCCEECTTTTTTC-CEEEEEEE
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCc----hhhhccCCCCcEEECCCCccccccCHHHccCC-CCCCEEEC
Confidence 99999998777779999999999999999997532 136889999999999999 5777778888888 79999999
Q ss_pred cCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhh---cCCCCCEEEcccCcC
Q 045449 363 ANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELC---HLARLHSLVLQGNKF 439 (823)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l 439 (823)
++|.+++..|..+..+++|++|++++|+++...+..+..+++|++|++++|++++..+..+. ....++.++|++|.+
T Consensus 182 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l 261 (353)
T 2z80_A 182 DASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKI 261 (353)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBC
T ss_pred CCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccc
Confidence 99999999999999999999999999999744444456789999999999999987655443 467789999999999
Q ss_pred cc----cccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccC
Q 045449 440 SG----SIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLS 492 (823)
Q Consensus 440 ~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 492 (823)
++ .+|..+..+++|+.|+|++|+++...+..+..+++|++|++++|.+++..|
T Consensus 262 ~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 262 TDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 87 478889999999999999999996544446899999999999999998765
No 67
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.3e-29 Score=294.76 Aligned_cols=122 Identities=23% Similarity=0.260 Sum_probs=74.9
Q ss_pred CCccccccccCCCCCCccceeeeeC------CCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCC
Q 045449 24 DHTNLFARNWTSSTSVCIWIGITCD------VNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIF 97 (823)
Q Consensus 24 ~~~~~~~~~W~~~~~~c~w~gv~c~------~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 97 (823)
|+...++ +|....+||.|+|..|. .....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|.
T Consensus 7 ~~~~~w~-~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~--- 78 (622)
T 3g06_A 7 EYDAVWS-AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA--- 78 (622)
T ss_dssp ---CHHH-HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---
T ss_pred HHHHHHH-HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---
Confidence 3444555 89888899999775331 11124677777777777 5666554 67777777777777 4444
Q ss_pred CCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceee
Q 045449 98 NMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLS 168 (823)
Q Consensus 98 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~ 168 (823)
.+++|++|+|++|+|++ +|. .+++|++|+|++|++++ +|. .+++|++|+|++|+++
T Consensus 79 ~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~----------~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA----------LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC----------CCTTCCEEECCSSCCS
T ss_pred cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC----------CCCCcCEEECCCCCCC
Confidence 45677777777777663 333 45666666666666653 221 2355666666666655
No 68
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.96 E-value=7.8e-32 Score=285.74 Aligned_cols=147 Identities=26% Similarity=0.370 Sum_probs=117.0
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|+..+.||+|+ |+.||||+++.. .+...+.|.+|++++++++|||||+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4578888999986 667999998643 2445578999999999999999986
Q ss_pred --------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccc
Q 045449 678 --------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGI 719 (823)
Q Consensus 678 --------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGl 719 (823)
++.|++++|+|+|+++|+||||||+|||++.++.+||+|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 356899999999999999999999999999999999999999
Q ss_pred ccccCCCCcc----------ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 720 AKLLSGEDQL----------SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 720 a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
|+........ ...+..+||+.|||||++.+..|+.++||||+||++|||++ ||..
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~ 229 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST 229 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence 9986543221 12234689999999999999999999999999999999986 6654
No 69
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.4e-29 Score=268.50 Aligned_cols=254 Identities=20% Similarity=0.200 Sum_probs=138.9
Q ss_pred cEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccC
Q 045449 231 KEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIAD 310 (823)
Q Consensus 231 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 310 (823)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 56677777776 566543 35677777777777766666777777777777777777776676677666666666666
Q ss_pred cc-ccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccC
Q 045449 311 NY-LTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGN 389 (823)
Q Consensus 311 N~-l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 389 (823)
|. ++.. .+..+..+++|++|++++|.+++..|. .|.++++|++|++++|
T Consensus 90 n~~l~~~-----~~~~~~~l~~L~~L~l~~n~l~~~~~~-------------------------~~~~l~~L~~L~l~~n 139 (285)
T 1ozn_A 90 NAQLRSV-----DPATFHGLGRLHTLHLDRCGLQELGPG-------------------------LFRGLAALQYLYLQDN 139 (285)
T ss_dssp CTTCCCC-----CTTTTTTCTTCCEEECTTSCCCCCCTT-------------------------TTTTCTTCCEEECCSS
T ss_pred CCCcccc-----CHHHhcCCcCCCEEECCCCcCCEECHh-------------------------HhhCCcCCCEEECCCC
Confidence 65 5544 223444555555555555555444444 4444444445555555
Q ss_pred cCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccch
Q 045449 390 NLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSS 469 (823)
Q Consensus 390 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 469 (823)
++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+.
T Consensus 140 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 219 (285)
T 1ozn_A 140 ALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 219 (285)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred cccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHH
Confidence 55444444444455555555555555544333445555555555555555555555555555555555555555554444
Q ss_pred hhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcc
Q 045449 470 TIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITI 519 (823)
Q Consensus 470 ~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~ 519 (823)
.+..+++|+.|++++|.+++..+.. ..+..++.++.+.|.+.+..|..+
T Consensus 220 ~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 220 ALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred HcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 4555555555555555555433321 011223333444555555444443
No 70
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.96 E-value=1.8e-31 Score=288.75 Aligned_cols=154 Identities=25% Similarity=0.301 Sum_probs=131.0
Q ss_pred HhccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcch-hhHHH---------
Q 045449 626 ATDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRH-RNLVK--------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~--------- 677 (823)
..++|...+.||+|+ ++.||||++.... ....++|.+|++++.++.| ||||+
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 346788889999997 2459999997543 3445789999999999965 99998
Q ss_pred ------------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC
Q 045449 678 ------------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED 709 (823)
Q Consensus 678 ------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~ 709 (823)
++.|++.+|+|+|+++||||||||+|||++++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~ 221 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK 221 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC
Confidence 13478899999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 710 MVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 710 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
+.+||+|||+|+..............+||+.|||||++.++.|+.++|||||||++||+++ |+.||.+..
T Consensus 222 ~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 9999999999998765544444556789999999999999999999999999999999998 899997653
No 71
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=2.3e-30 Score=295.08 Aligned_cols=235 Identities=19% Similarity=0.158 Sum_probs=142.9
Q ss_pred CCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCC
Q 045449 252 LPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKK 331 (823)
Q Consensus 252 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~ 331 (823)
+++|++|+|++|.+++..|..|..+++|++|+|++|.+++.+| |..+++|++|+|++|.+++.+ ..++
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~----------~~~~ 100 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL----------VGPS 100 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE----------ECTT
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC----------CCCC
Confidence 4478888888888888777888888888888888888887665 778888888888888877642 1256
Q ss_pred ceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhccc-ccCCCCEEEc
Q 045449 332 LKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFS-QLQTLQAFDL 410 (823)
Q Consensus 332 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L 410 (823)
|+.|++++|.+++..+.. + ++|++|+|++|.+++..|..++.+++|++|+|++|++++.+|..+. .+++|++|+|
T Consensus 101 L~~L~L~~N~l~~~~~~~---l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 101 IETLHAANNNISRVSCSR---G-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp CCEEECCSSCCCCEEECC---C-SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred cCEEECcCCcCCCCCccc---c-CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 677777777776654432 2 3456666666666655555555556666666666666555555543 4555555555
Q ss_pred cCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccc-c
Q 045449 411 TRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLD-G 489 (823)
Q Consensus 411 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~-g 489 (823)
++|.|++..+ +..+++|+.|+|++|.|++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ +
T Consensus 177 s~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 177 QYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 5555554422 2235555555555555554322 35555555555555555554 3444555555555555555555 4
Q ss_pred ccCccccCCCCCcEEEc
Q 045449 490 PLSLDIGNLKVVIGLDF 506 (823)
Q Consensus 490 ~~p~~~~~l~~L~~L~l 506 (823)
.+|..+..++.|+.+++
T Consensus 253 ~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 253 TLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred chHHHHHhCCCCcEEec
Confidence 44444444444444444
No 72
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.96 E-value=1.7e-32 Score=289.58 Aligned_cols=149 Identities=28% Similarity=0.352 Sum_probs=120.1
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
++|+..+.||+|+ ++.||||+++... .....++.+|++++++++|||||+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5688888888885 4569999986432 112246889999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+++|++.+|+|+|+++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 181 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 181 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C--
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc--
Confidence 478999999999999999999999999999999999999999987543322
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|||||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 234578999999999999999999999999999999999999999764
No 73
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.4e-30 Score=279.89 Aligned_cols=250 Identities=17% Similarity=0.158 Sum_probs=177.6
Q ss_pred ccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeecccc-ccccCcccc-------CCCCCCeEEeecccccccCCC
Q 045449 224 IFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSF-SGTIPSSIT-------NSSKLSDLELGENLFSGFIPN 295 (823)
Q Consensus 224 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 295 (823)
+...++|++|++++|.+ .+|..+.. .|+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD---IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH---HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH---HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 34455667777777776 56665544 266667777776 344555444 566677777777776666665
Q ss_pred cc--CCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCcccccc----ccccceEEecCCccee
Q 045449 296 TI--GNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNF----SLSLETILMANCSISG 369 (823)
Q Consensus 296 ~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~----~~~L~~L~L~~N~l~~ 369 (823)
.+ ..+++| ++|+|++|.+++. |..+..+ .++|++|++++|++++
T Consensus 114 ~~~~~~l~~L-----------------------------~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~ 163 (312)
T 1wwl_A 114 PLLEATGPDL-----------------------------NILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLN 163 (312)
T ss_dssp CSSSCCSCCC-----------------------------SEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCC
T ss_pred HHHHhcCCCc-----------------------------cEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCcc
Confidence 44 444444 4555555555544 4444443 1467777777777777
Q ss_pred ccCccccCcccccEEEcccCcCCCC--chhcc--cccCCCCEEEccCCCCCCc--ch-HhhhcCCCCCEEEcccCcCccc
Q 045449 370 NIPQVVGNLSNLLVLELGGNNLTGP--IPVTF--SQLQTLQAFDLTRNKLAGP--IT-DELCHLARLHSLVLQGNKFSGS 442 (823)
Q Consensus 370 ~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~g~ 442 (823)
..|..|+.+++|++|+|++|++.|. .|..+ ..+++|++|+|++|++++. ++ ..+.++++|+.|+|++|++++.
T Consensus 164 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 243 (312)
T 1wwl_A 164 FSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDA 243 (312)
T ss_dssp CCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSS
T ss_pred chHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcc
Confidence 7777888888888888888888765 33444 7888888999999888842 22 3356778899999999999887
Q ss_pred cc-ccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCC
Q 045449 443 IP-SCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSG 513 (823)
Q Consensus 443 ~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 513 (823)
+| ..+..+++|++|+|++|+++ .+|..+. ++|++|||++|++++. |. +..++.|+.|++++|++++
T Consensus 244 ~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 244 AGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 75 45667888999999999998 5677666 8899999999999877 55 8889999999999999885
No 74
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.3e-28 Score=278.83 Aligned_cols=249 Identities=20% Similarity=0.244 Sum_probs=167.5
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
....++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 3456778888887 6776553 57888888888888888888888888888888888888888888888888888888
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecC-CcceeccCccccCcccccEEEcc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMAN-CSISGNIPQVVGNLSNLLVLELG 387 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls 387 (823)
++|+++..+ +..|.++++|++|+|++|.+++..+..|..+ ++|++|++++ |.+....+..|.++++|++|+|+
T Consensus 131 ~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 204 (452)
T 3zyi_A 131 FDNWLTVIP-----SGAFEYLSKLRELWLRNNPIESIPSYAFNRV-PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204 (452)
T ss_dssp CSSCCSBCC-----TTTSSSCTTCCEEECCSCCCCEECTTTTTTC-TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECT
T ss_pred CCCcCCccC-----hhhhcccCCCCEEECCCCCcceeCHhHHhcC-CcccEEeCCCCCCccccChhhccCCCCCCEEECC
Confidence 888887663 3346667777777777777776555556665 5666666666 33443334456666666666666
Q ss_pred cCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCcccccc
Q 045449 388 GNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVL 467 (823)
Q Consensus 388 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 467 (823)
+|++++ +| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..
T Consensus 205 ~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 205 MCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLP 282 (452)
T ss_dssp TSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccC
Confidence 666663 23 3555666666666666666655666666666666666666666655666666666666666666666555
Q ss_pred chhhhccCCCcEEecccccccc
Q 045449 468 SSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 468 p~~~~~l~~L~~LdLs~N~l~g 489 (823)
+..+..+++|+.|+|++|.+..
T Consensus 283 ~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 283 HDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTSSTTCTTCCEEECCSSCEEC
T ss_pred hHHhccccCCCEEEccCCCcCC
Confidence 5555555566666666665543
No 75
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.7e-30 Score=279.21 Aligned_cols=255 Identities=20% Similarity=0.201 Sum_probs=160.2
Q ss_pred cCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcc-cccCCcccc------cCCCCccEEEeeccccccccCcc
Q 045449 200 IGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSL-SGSLPSRID------LSLPNVETLNLGINSFSGTIPSS 272 (823)
Q Consensus 200 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~g~lp~~~~------~~l~~L~~L~Ls~N~l~~~~p~~ 272 (823)
++..++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ..+++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566677777777777 556555443 77777777777 345555443 13677888888888888777776
Q ss_pred c--cCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccc
Q 045449 273 I--TNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSI 350 (823)
Q Consensus 273 ~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 350 (823)
+ ..+++|++|+|++|++++. |..++.+.. ..+++|++|+|++|++++..|..+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~------------------------~~~~~L~~L~L~~N~l~~~~~~~~ 169 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQ------------------------WLKPGLKVLSIAQAHSLNFSCEQV 169 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHT------------------------TCCTTCCEEEEESCSCCCCCTTTC
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHH------------------------hhcCCCcEEEeeCCCCccchHHHh
Confidence 5 7778888888888888776 665554410 001333344444444444334444
Q ss_pred cccccccceEEecCCcceec--cCccc--cCcccccEEEcccCcCCC--Cch-hcccccCCCCEEEccCCCCCCcch-Hh
Q 045449 351 GNFSLSLETILMANCSISGN--IPQVV--GNLSNLLVLELGGNNLTG--PIP-VTFSQLQTLQAFDLTRNKLAGPIT-DE 422 (823)
Q Consensus 351 ~~~~~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~ 422 (823)
+.+ ++|++|++++|++.+. .|..+ ..+++|++|+|++|++++ .++ ..+..+++|++|+|++|++++.+| ..
T Consensus 170 ~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 248 (312)
T 1wwl_A 170 RVF-PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS 248 (312)
T ss_dssp CCC-SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSC
T ss_pred ccC-CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhh
Confidence 444 3444455555444433 12222 566777777777777763 122 234566777777777777776654 33
Q ss_pred hhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 423 LCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 423 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
+..+++|++|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|++|++++|++++
T Consensus 249 ~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 249 CDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 455677777777777777 6666665 6777788888877775 44 7777788888888887765
No 76
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.6e-32 Score=316.97 Aligned_cols=407 Identities=11% Similarity=0.014 Sum_probs=302.5
Q ss_pred CCCCCCCCCCCCCEEECCCCcC---cCCCchh------------hhcCCCCcEEecccccccCccCccccCCCCCCcc-c
Q 045449 91 NIPSSIFNMHTLKLLDFSDNQL---FGSLSSF------------IFNMSSMTTIDLSINRLSGELPANICKIPSTLSK-C 154 (823)
Q Consensus 91 ~~p~~~~~l~~L~~L~Ls~N~l---~~~~p~~------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~-l 154 (823)
..+..+..+++|++|+|+++.. .+.+|.. ...+++|++|+|++|.+++..+..+ .. +
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l-------~~~~ 136 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRL-------AKAR 136 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH-------HHHH
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHH-------HHhc
Confidence 3444556788999999987532 1233322 2378999999999998886655555 33 3
Q ss_pred c-ccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCC----ccccccCCCC
Q 045449 155 K-QLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGV----VPVTIFNMSA 229 (823)
Q Consensus 155 ~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~ 229 (823)
+ +|++|+|++|.-. .+. .+..+ ..++++|++|+|++|.+++. ++..+.++++
T Consensus 137 ~~~L~~L~L~~~~~~--~~~------~l~~~---------------~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~ 193 (592)
T 3ogk_B 137 ADDLETLKLDKCSGF--TTD------GLLSI---------------VTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTS 193 (592)
T ss_dssp GGGCCEEEEESCEEE--EHH------HHHHH---------------HHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCC
T ss_pred cccCcEEECcCCCCc--CHH------HHHHH---------------HhhCCCCCEEECccccccCcchhHHHHHHhcCCC
Confidence 3 4999999998721 111 11111 23467899999999998876 4445668899
Q ss_pred CcEEEccCCccc----ccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeeccccc---ccCCCccCCCcc
Q 045449 230 LKEISLLNNSLS----GSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFS---GFIPNTIGNLRN 302 (823)
Q Consensus 230 L~~L~Ls~N~l~----g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~ 302 (823)
|++|++++|.++ +.++..+. .+++|++|+|++|.+.+ +|..+.++++|+.|+++++... +..+..+..+++
T Consensus 194 L~~L~L~~n~~~~~~~~~l~~~~~-~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 194 LEVLNFYMTEFAKISPKDLETIAR-NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCEEECTTCCCSSCCHHHHHHHHH-HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred ccEEEeeccCCCccCHHHHHHHHh-hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 999999999997 23333333 48999999999999986 7788999999999999974433 344567788899
Q ss_pred cCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCC-ccccccccccceEEecCCcceeccCccccCcccc
Q 045449 303 LEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILP-KSIGNFSLSLETILMANCSISGNIPQVVGNLSNL 381 (823)
Q Consensus 303 L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 381 (823)
|+.|+++++.... ++..+..+++|+.|+|++|.+++... ..+..+ ++|++|+++++...+.++..+..+++|
T Consensus 272 L~~L~l~~~~~~~------l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~-~~L~~L~L~~~~~~~~l~~~~~~~~~L 344 (592)
T 3ogk_B 272 LCRLGLSYMGPNE------MPILFPFAAQIRKLDLLYALLETEDHCTLIQKC-PNLEVLETRNVIGDRGLEVLAQYCKQL 344 (592)
T ss_dssp CCEEEETTCCTTT------GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTC-TTCCEEEEEGGGHHHHHHHHHHHCTTC
T ss_pred ccccCccccchhH------HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhC-cCCCEEeccCccCHHHHHHHHHhCCCC
Confidence 9999998863332 55677889999999999999876544 334566 799999999444344455556778999
Q ss_pred cEEEcc-----------cCcCCCC-chhcccccCCCCEEEccCCCCCCcchHhhhc-CCCCCEEEcc----cCcCccc--
Q 045449 382 LVLELG-----------GNNLTGP-IPVTFSQLQTLQAFDLTRNKLAGPITDELCH-LARLHSLVLQ----GNKFSGS-- 442 (823)
Q Consensus 382 ~~L~Ls-----------~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~g~-- 442 (823)
++|+++ .|.+++. ++..+..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|.+++.
T Consensus 345 ~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~ 424 (592)
T 3ogk_B 345 KRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPL 424 (592)
T ss_dssp CEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCC
T ss_pred CEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchH
Confidence 999999 4677754 3333566899999999999999888888766 9999999997 7788864
Q ss_pred ---ccccccCCCCCCeEeccCC--ccccccchhhhc-cCCCcEEecccccccc-ccCccccCCCCCcEEEcccCCCCCCC
Q 045449 443 ---IPSCLGNLTSVRVLYLGLN--IFTSVLSSTIWN-LKDILFIDVSSNFLDG-PLSLDIGNLKVVIGLDFSRNNLSGDI 515 (823)
Q Consensus 443 ---~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~LdLs~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~i 515 (823)
++..+.++++|+.|+|+.+ .+++..+..+.. +++|+.|++++|.+++ .++..+..++.|++|++++|++++..
T Consensus 425 ~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 504 (592)
T 3ogk_B 425 DNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERA 504 (592)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHH
Confidence 5555778999999999853 478777777655 8999999999999987 45556688999999999999987432
Q ss_pred CCcccCccCCCCCCCCCCCcccccCCcc
Q 045449 516 PITIGEGEIPRGGPFANLTAKSFMGNEL 543 (823)
Q Consensus 516 p~~~~~g~ip~~~~~~~~~~~~~~~n~~ 543 (823)
...+. ..+..+..+.+.+|..
T Consensus 505 ~~~~~-------~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 505 IAAAV-------TKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHHHH-------HHCSSCCEEEEESCBC
T ss_pred HHHHH-------HhcCccCeeECcCCcC
Confidence 22111 1245566777888873
No 77
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=277.15 Aligned_cols=248 Identities=23% Similarity=0.250 Sum_probs=164.8
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
....++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 3557778888887 7777653 57888888888888877788888888888888888888877778888888888888
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCC-cceeccCccccCcccccEEEcc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANC-SISGNIPQVVGNLSNLLVLELG 387 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls 387 (823)
++|+++..+ +..|..+++|+.|+|++|.+++..+..|..+ ++|++|++++| .+....+..|.++++|++|+|+
T Consensus 120 ~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 193 (440)
T 3zyj_A 120 FDNRLTTIP-----NGAFVYLSKLKELWLRNNPIESIPSYAFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 193 (440)
T ss_dssp CSSCCSSCC-----TTTSCSCSSCCEEECCSCCCCEECTTTTTTC-TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECT
T ss_pred CCCcCCeeC-----HhHhhccccCceeeCCCCcccccCHHHhhhC-cccCEeCCCCCCCcceeCcchhhcccccCeecCC
Confidence 888777652 2356667777777777777766555566665 56666666663 3333334456666666666666
Q ss_pred cCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCcccccc
Q 045449 388 GNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVL 467 (823)
Q Consensus 388 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 467 (823)
+|+++ .+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|++++..
T Consensus 194 ~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 194 MCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp TSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCC
T ss_pred CCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccC
Confidence 66666 333 2555666666666666666555556666666666666666666555555666666666666666666555
Q ss_pred chhhhccCCCcEEeccccccc
Q 045449 468 SSTIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 468 p~~~~~l~~L~~LdLs~N~l~ 488 (823)
+..+..+++|+.|+|++|.+.
T Consensus 272 ~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 272 HDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTTTSSCTTCCEEECCSSCEE
T ss_pred hhHhccccCCCEEEcCCCCcc
Confidence 555555555555555555554
No 78
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.9e-29 Score=264.25 Aligned_cols=229 Identities=22% Similarity=0.230 Sum_probs=185.6
Q ss_pred cEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEE
Q 045449 256 ETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVL 335 (823)
Q Consensus 256 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L 335 (823)
++++.+++.++ .+|..+ .++|++|++++|.+++..+..|..+++ |++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~-----------------------------L~~L 61 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRN-----------------------------LTIL 61 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTT-----------------------------CCEE
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCC-----------------------------CCEE
Confidence 45666666665 344433 245666666666666555555555544 4555
Q ss_pred EeecCCCCccCCccccccccccceEEecCCc-ceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCC
Q 045449 336 IVTGNPLDGILPKSIGNFSLSLETILMANCS-ISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNK 414 (823)
Q Consensus 336 ~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 414 (823)
++++|.+++..|..+..+ ++|++|++++|. ++...|..|..+++|++|++++|++++..|..|..+++|++|++++|+
T Consensus 62 ~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 140 (285)
T 1ozn_A 62 WLHSNVLARIDAAAFTGL-ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA 140 (285)
T ss_dssp ECCSSCCCEECTTTTTTC-TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCccceeCHhhcCCc-cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCc
Confidence 555555555555556665 567777777775 666667888899999999999999998889999999999999999999
Q ss_pred CCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCcc
Q 045449 415 LAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLD 494 (823)
Q Consensus 415 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~ 494 (823)
+++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+..
T Consensus 141 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 220 (285)
T 1ozn_A 141 LQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220 (285)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHH
T ss_pred ccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHH
Confidence 99888888999999999999999999877778999999999999999999999999999999999999999999877778
Q ss_pred ccCCCCCcEEEcccCCCCCCCCC
Q 045449 495 IGNLKVVIGLDFSRNNLSGDIPI 517 (823)
Q Consensus 495 ~~~l~~L~~L~ls~N~l~g~ip~ 517 (823)
+..++.|+.|++++|++.+..+.
T Consensus 221 ~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 221 LAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp HTTCTTCCEEECCSSCEECSGGG
T ss_pred cccCcccCEEeccCCCccCCCCc
Confidence 99999999999999999976654
No 79
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.3e-30 Score=280.63 Aligned_cols=267 Identities=19% Similarity=0.157 Sum_probs=175.3
Q ss_pred CcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCccccc
Q 045449 230 LKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIA 309 (823)
Q Consensus 230 L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 309 (823)
++..+++.+.+. ..+..++..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ +..+++|++|+++
T Consensus 12 l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 344455555554 3333333345556666666666665555566666666666666666665443 5666666666666
Q ss_pred CccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccC
Q 045449 310 DNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGN 389 (823)
Q Consensus 310 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 389 (823)
+|++++.. ..++|+.|++++|.+++..+.. + ++|++|++++|++++..+..+..+++|++|+|++|
T Consensus 89 ~n~l~~l~----------~~~~L~~L~l~~n~l~~~~~~~---~-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (317)
T 3o53_A 89 NNYVQELL----------VGPSIETLHAANNNISRVSCSR---G-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (317)
T ss_dssp SSEEEEEE----------ECTTCCEEECCSSCCSEEEECC---C-SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTS
T ss_pred CCcccccc----------CCCCcCEEECCCCccCCcCccc---c-CCCCEEECCCCCCCCccchhhhccCCCCEEECCCC
Confidence 66665431 2256666777777766654433 2 46777777777777777777777777788888888
Q ss_pred cCCCCchhcc-cccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccc
Q 045449 390 NLTGPIPVTF-SQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLS 468 (823)
Q Consensus 390 ~l~g~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p 468 (823)
++++..+..+ ..+++|++|+|++|++++. +. ...+++|+.|+|++|++++. |..+..+++|+.|+|++|++++ +|
T Consensus 155 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~-l~ 230 (317)
T 3o53_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IE 230 (317)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-EC
T ss_pred CCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc-hh
Confidence 7776666655 3677788888888877754 22 23477788888888888753 4447777888888888888775 56
Q ss_pred hhhhccCCCcEEeccccccc-cccCccccCCCCCcEEEcc-cCCCCCCCCC
Q 045449 469 STIWNLKDILFIDVSSNFLD-GPLSLDIGNLKVVIGLDFS-RNNLSGDIPI 517 (823)
Q Consensus 469 ~~~~~l~~L~~LdLs~N~l~-g~~p~~~~~l~~L~~L~ls-~N~l~g~ip~ 517 (823)
..+..+++|+.|++++|.++ +.+|..+..++.|+.|+++ .+.++|..|.
T Consensus 231 ~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred hHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 66777788888888888887 6677777778888888887 4556654443
No 80
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.2e-28 Score=276.89 Aligned_cols=252 Identities=19% Similarity=0.221 Sum_probs=227.5
Q ss_pred CccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCce
Q 045449 254 NVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK 333 (823)
Q Consensus 254 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 333 (823)
....++.+++.++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++. .+..|.++++|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-----~~~~~~~l~~L~ 126 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQI-----EVGAFNGLASLN 126 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE-----CTTTTTTCTTCC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCc-----ChhhccCcccCC
Confidence 4567889988888 5777665 5899999999999999999999999999999999999987 446789999999
Q ss_pred EEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCch-hcccccCCCCEEEccC
Q 045449 334 VLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIP-VTFSQLQTLQAFDLTR 412 (823)
Q Consensus 334 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~ 412 (823)
+|+|++|.+++..+..|..+ ++|++|+|++|+++...+..|.++++|++|+|++|+..+.++ ..|.++++|++|+|++
T Consensus 127 ~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 205 (452)
T 3zyi_A 127 TLELFDNWLTVIPSGAFEYL-SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 205 (452)
T ss_dssp EEECCSSCCSBCCTTTSSSC-TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTT
T ss_pred EEECCCCcCCccChhhhccc-CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCC
Confidence 99999999998888888888 799999999999998888899999999999999954444554 5689999999999999
Q ss_pred CCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccC
Q 045449 413 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLS 492 (823)
Q Consensus 413 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 492 (823)
|++++. | .+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..|..+..+++|+.|||++|+|++..+
T Consensus 206 n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 206 CNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp SCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred Cccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 999965 4 47889999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ccccCCCCCcEEEcccCCCCCCCC
Q 045449 493 LDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 493 ~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
..+..++.|+.|+|++|.+.+...
T Consensus 284 ~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 284 DLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TSSTTCTTCCEEECCSSCEECSTT
T ss_pred HHhccccCCCEEEccCCCcCCCCC
Confidence 889999999999999999987654
No 81
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.2e-28 Score=273.63 Aligned_cols=251 Identities=20% Similarity=0.226 Sum_probs=224.5
Q ss_pred CccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCce
Q 045449 254 NVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK 333 (823)
Q Consensus 254 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 333 (823)
....++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.++.. .+..|.++++|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i-----~~~~~~~l~~L~ 115 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI-----EIGAFNGLANLN 115 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEE-----CGGGGTTCSSCC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCcc-----ChhhccCCccCC
Confidence 4568889999988 6787665 5899999999999999999999999999999999999886 456789999999
Q ss_pred EEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCch-hcccccCCCCEEEccC
Q 045449 334 VLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIP-VTFSQLQTLQAFDLTR 412 (823)
Q Consensus 334 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~ 412 (823)
.|+|++|++++..+..|..+ .+|++|+|++|.++...+..|.++++|++|+|++|+..+.++ ..|.++++|++|+|++
T Consensus 116 ~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 194 (440)
T 3zyj_A 116 TLELFDNRLTTIPNGAFVYL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194 (440)
T ss_dssp EEECCSSCCSSCCTTTSCSC-SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTT
T ss_pred EEECCCCcCCeeCHhHhhcc-ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCC
Confidence 99999999998877788888 799999999999998888899999999999999955444444 5789999999999999
Q ss_pred CCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccC
Q 045449 413 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLS 492 (823)
Q Consensus 413 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 492 (823)
|+++. +| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|||++|++++..+
T Consensus 195 n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 195 CNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp SCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred CcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 99994 45 47889999999999999999889999999999999999999999999999999999999999999998888
Q ss_pred ccccCCCCCcEEEcccCCCCCCC
Q 045449 493 LDIGNLKVVIGLDFSRNNLSGDI 515 (823)
Q Consensus 493 ~~~~~l~~L~~L~ls~N~l~g~i 515 (823)
..+..++.|+.|+|++|.+.+..
T Consensus 273 ~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 273 DLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TTTSSCTTCCEEECCSSCEECSS
T ss_pred hHhccccCCCEEEcCCCCccCCC
Confidence 88899999999999999988654
No 82
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=9e-30 Score=274.19 Aligned_cols=267 Identities=18% Similarity=0.136 Sum_probs=189.8
Q ss_pred hhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecc
Q 045449 208 RLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGEN 287 (823)
Q Consensus 208 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 287 (823)
..+++.+.+....+..+..+++|++|+|++|.+++..|..+. .+++|++|+|++|++++..| +..+++|++|+|++|
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLA-PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHT-TCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhh-CCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 334444444433344444455566666666666533333332 35666666666666654443 566666666666666
Q ss_pred cccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcc
Q 045449 288 LFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSI 367 (823)
Q Consensus 288 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l 367 (823)
++++..+ .++|++|++++|++++.. ...+++|+.|++++|.+++..|..+..+ ++|++|++++|.+
T Consensus 91 ~l~~l~~-----~~~L~~L~l~~n~l~~~~--------~~~~~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l 156 (317)
T 3o53_A 91 YVQELLV-----GPSIETLHAANNNISRVS--------CSRGQGKKNIYLANNKITMLRDLDEGCR-SRVQYLDLKLNEI 156 (317)
T ss_dssp EEEEEEE-----CTTCCEEECCSSCCSEEE--------ECCCSSCEEEECCSSCCCSGGGBCTGGG-SSEEEEECTTSCC
T ss_pred ccccccC-----CCCcCEEECCCCccCCcC--------ccccCCCCEEECCCCCCCCccchhhhcc-CCCCEEECCCCCC
Confidence 6664432 256666666666666542 1235667888888888887777777777 6888888888888
Q ss_pred eeccCcccc-CcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccccccc
Q 045449 368 SGNIPQVVG-NLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSC 446 (823)
Q Consensus 368 ~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 446 (823)
++..+..+. .+++|++|+|++|++++. |. ...+++|++|+|++|++++. |..+..+++|+.|+|++|+++ .+|..
T Consensus 157 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~ 232 (317)
T 3o53_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKA 232 (317)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTT
T ss_pred CcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhH
Confidence 887777664 688999999999999854 33 34588999999999999965 445889999999999999999 57888
Q ss_pred ccCCCCCCeEeccCCccc-cccchhhhccCCCcEEecc-ccccccccCccc
Q 045449 447 LGNLTSVRVLYLGLNIFT-SVLSSTIWNLKDILFIDVS-SNFLDGPLSLDI 495 (823)
Q Consensus 447 ~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdLs-~N~l~g~~p~~~ 495 (823)
+..+++|+.|+|++|.++ +.+|..+..++.|+.|+++ .+.++|..|...
T Consensus 233 ~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~ 283 (317)
T 3o53_A 233 LRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEEC 283 (317)
T ss_dssp CCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCC
T ss_pred hhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhcc
Confidence 999999999999999999 7888999999999999999 456777766543
No 83
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.5e-29 Score=278.53 Aligned_cols=151 Identities=30% Similarity=0.379 Sum_probs=127.8
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||+|+ |+.||||+++... ....+.+.+|++++++++|||||+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5788889999996 6779999996543 345578999999999999999997
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~ 213 (398)
T 4b99_A 134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213 (398)
T ss_dssp EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcc
Confidence 468999999999999999999999999999999999999999987643221
Q ss_pred --cccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 --LSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 --~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.......+||+.|||||++.+. .|+.++||||+||++|+|++|..||.+.
T Consensus 214 ~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp --CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 1233467899999999998775 4699999999999999999999999754
No 84
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=3e-27 Score=274.87 Aligned_cols=265 Identities=23% Similarity=0.263 Sum_probs=218.2
Q ss_pred hhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEe
Q 045449 205 YLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLEL 284 (823)
Q Consensus 205 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 284 (823)
+++.|++++|+++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 4778999999998 5676665 78999999999998 6776 37899999999999984 665 6788999999
Q ss_pred ecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecC
Q 045449 285 GENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMAN 364 (823)
Q Consensus 285 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~ 364 (823)
++|++++. |. .+++|+.|++++|+++..+. .+++|++|++++|.+++. |.. +.+|+.|++++
T Consensus 109 s~N~l~~l-~~---~l~~L~~L~L~~N~l~~lp~---------~l~~L~~L~Ls~N~l~~l-~~~----~~~L~~L~L~~ 170 (622)
T 3g06_A 109 FSNPLTHL-PA---LPSGLCKLWIFGNQLTSLPV---------LPPGLQELSVSDNQLASL-PAL----PSELCKLWAYN 170 (622)
T ss_dssp CSCCCCCC-CC---CCTTCCEEECCSSCCSCCCC---------CCTTCCEEECCSSCCSCC-CCC----CTTCCEEECCS
T ss_pred cCCcCCCC-CC---CCCCcCEEECCCCCCCcCCC---------CCCCCCEEECcCCcCCCc-CCc----cCCCCEEECCC
Confidence 99999875 33 56889999999999988632 248899999999999864 432 26799999999
Q ss_pred CcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccccc
Q 045449 365 CSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIP 444 (823)
Q Consensus 365 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 444 (823)
|.+++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|. .+++|+.|+|++|+|++ +|
T Consensus 171 N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp 237 (622)
T 3g06_A 171 NQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP 237 (622)
T ss_dssp SCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC
Confidence 99986 45 457889999999999985 5543 4789999999999984 443 34789999999999996 66
Q ss_pred ccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCccc
Q 045449 445 SCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIG 520 (823)
Q Consensus 445 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~ 520 (823)
..+++|+.|+|++|.|++ +|. .+++|+.|+|++|.|+ .+|..+.+++.|+.|+|++|+++|.+|..+.
T Consensus 238 ---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 238 ---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred ---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 456889999999999996 444 6788999999999999 7898999999999999999999988777553
No 85
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=9.7e-31 Score=307.14 Aligned_cols=431 Identities=15% Similarity=0.181 Sum_probs=279.9
Q ss_pred CCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCC---CCCCCCC------------CCCCCC
Q 045449 38 SVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLS---GNIPSSI------------FNMHTL 102 (823)
Q Consensus 38 ~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~---g~~p~~~------------~~l~~L 102 (823)
-|++|.++.. .....++++..... .....+..+++|++|+|+++... +..|..+ ..+++|
T Consensus 33 vck~W~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIER----WCRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHH----HHCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhh----hhceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 3567998832 12345566543322 11233567788999999987632 1223222 357889
Q ss_pred CEEECCCCcCcCCCchhhh-cCCCCcEEecccc-cccCc-cCccccCCCCCCccccccceeeeccceeeccCccccccch
Q 045449 103 KLLDFSDNQLFGSLSSFIF-NMSSMTTIDLSIN-RLSGE-LPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLT 179 (823)
Q Consensus 103 ~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 179 (823)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++. + +.++++|++|+|++|.+++..+..+..
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~------~~~~~~L~~L~L~~~~i~~~~~~~l~~-- 178 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAA-I------AATCRNLKELDLRESDVDDVSGHWLSH-- 178 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHH-H------HHHCTTCCEEECTTCEEECCCGGGGGG--
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHH-H------HHhCCCCCEEeCcCCccCCcchHHHHH--
Confidence 9999999998887777776 7899999999988 45432 222 1 257889999999999988655443321
Q ss_pred hhHHHHHhhcCCCcccCCcccCCcchhhhhcccccc--ccCC-ccccccCCCCCcEEEccCC-cccccCCcccccCCCCc
Q 045449 180 KLKEIISTITNSTVCEIPREIGNLPYLARLALATNN--LVGV-VPVTIFNMSALKEISLLNN-SLSGSLPSRIDLSLPNV 255 (823)
Q Consensus 180 ~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~Ls~N-~l~g~lp~~~~~~l~~L 255 (823)
....+++|+.|+++.|. ++.. ++..+.++++|++|+|++| .++ .+|..+.. +++|
T Consensus 179 -------------------~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~-~~~L 237 (594)
T 2p1m_B 179 -------------------FPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQR-APQL 237 (594)
T ss_dssp -------------------SCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHH-CTTC
T ss_pred -------------------HhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhc-CCcc
Confidence 22345677788888776 2211 1122235688888888887 444 35555544 7888
Q ss_pred cEEEe-------eccccccccCccccCCCCCCeE-EeecccccccCCCccCCCcccCcccccCccccCCCCccccccccc
Q 045449 256 ETLNL-------GINSFSGTIPSSITNSSKLSDL-ELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLT 327 (823)
Q Consensus 256 ~~L~L-------s~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 327 (823)
++|++ +.|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|+.|+|++|.+++.. +...+.
T Consensus 238 ~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~----l~~~~~ 311 (594)
T 2p1m_B 238 EELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYD----LVKLLC 311 (594)
T ss_dssp SEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHH----HHHHHT
T ss_pred eEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHH----HHHHHh
Confidence 88884 4444554 34467788888887 3433322 234555556788888888888865431 223356
Q ss_pred CCCCceEEEeecCCCCcc-CCccccccccccceEEe---------cCCcceeccCcccc-CcccccEEEcccCcCCCCch
Q 045449 328 NCKKLKVLIVTGNPLDGI-LPKSIGNFSLSLETILM---------ANCSISGNIPQVVG-NLSNLLVLELGGNNLTGPIP 396 (823)
Q Consensus 328 ~l~~L~~L~Ls~N~l~~~-~p~~~~~~~~~L~~L~L---------~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p 396 (823)
.+++|+.|++++| +... ++.....+ ++|++|++ +.+.+++.....+. ++++|+.|+++.|++++..+
T Consensus 312 ~~~~L~~L~l~~~-~~~~~l~~l~~~~-~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~ 389 (594)
T 2p1m_B 312 QCPKLQRLWVLDY-IEDAGLEVLASTC-KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAAL 389 (594)
T ss_dssp TCTTCCEEEEEGG-GHHHHHHHHHHHC-TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHH
T ss_pred cCCCcCEEeCcCc-cCHHHHHHHHHhC-CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHH
Confidence 7788888888877 4322 12222234 57888887 33455544333333 47888888888888887665
Q ss_pred hccc-ccCCCCEEEcc--C----CCCCCc-----chHhhhcCCCCCEEEcccCcCcccccccccC-CCCCCeEeccCCcc
Q 045449 397 VTFS-QLQTLQAFDLT--R----NKLAGP-----ITDELCHLARLHSLVLQGNKFSGSIPSCLGN-LTSVRVLYLGLNIF 463 (823)
Q Consensus 397 ~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l 463 (823)
..+. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+
T Consensus 390 ~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 390 ITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp HHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCC
Confidence 5554 57888888888 4 566632 223356778888888876 666665555655 78888888888888
Q ss_pred ccccchhh-hccCCCcEEeccccccccccCc-cccCCCCCcEEEcccCCCC
Q 045449 464 TSVLSSTI-WNLKDILFIDVSSNFLDGPLSL-DIGNLKVVIGLDFSRNNLS 512 (823)
Q Consensus 464 ~~~~p~~~-~~l~~L~~LdLs~N~l~g~~p~-~~~~l~~L~~L~ls~N~l~ 512 (823)
++..+..+ ..+++|+.|+|++|.+++.... ....++.|+.|++++|+++
T Consensus 469 ~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 469 SDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp SHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred cHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 77666555 6688888888888888665443 3455788888888888774
No 86
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3e-28 Score=277.56 Aligned_cols=234 Identities=20% Similarity=0.163 Sum_probs=164.4
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
+|++|+|++|.+++..|..+. .+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+. ++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLA-PFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGT-TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHh-CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEEEC
Confidence 444444444444432222222 24445555555555444333 45555555555555555543321 55666666
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCcccc-CcccccEEEcc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVG-NLSNLLVLELG 387 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls 387 (823)
++|.+++.+ + ..+++|+.|+|++|.+++..|..++.+ ++|++|+|++|.+++..|..+. .+++|++|+|+
T Consensus 107 ~~N~l~~~~-----~---~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls 177 (487)
T 3oja_A 107 ANNNISRVS-----C---SRGQGKKNIYLANNKITMLRDLDEGCR-SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (487)
T ss_dssp CSSCCCCEE-----E---CCCSSCEEEECCSSCCCSGGGBCGGGG-SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCCcCCCCC-----c---cccCCCCEEECCCCCCCCCCchhhcCC-CCCCEEECCCCCCCCcChHHHhhhCCcccEEecC
Confidence 666665541 1 234667788888888887777777777 6888888888888888887776 78899999999
Q ss_pred cCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccc-cc
Q 045449 388 GNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFT-SV 466 (823)
Q Consensus 388 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-~~ 466 (823)
+|.+++..+ +..+++|++|+|++|+|++.+| .+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.++ +.
T Consensus 178 ~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 178 YNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp TSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred CCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 999986532 3458899999999999997555 48889999999999999995 7888899999999999999998 77
Q ss_pred cchhhhccCCCcEEecc
Q 045449 467 LSSTIWNLKDILFIDVS 483 (823)
Q Consensus 467 ~p~~~~~l~~L~~LdLs 483 (823)
+|..+..++.|+.++++
T Consensus 254 ~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 254 LRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred hHHHHHhCCCCcEEecc
Confidence 88888888888888886
No 87
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=3.2e-29 Score=266.97 Aligned_cols=149 Identities=28% Similarity=0.336 Sum_probs=112.9
Q ss_pred ccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------------
Q 045449 628 DRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------------- 677 (823)
+++...+.||+|+ |+.||||++....... ..++.|+..+.+++|||||+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 3455667888886 6789999997654322 33456677778899999998
Q ss_pred -----------------------HHHHHHHHhhhcCCC--------CEEeccCCCCCEEeCCCCcEEEeecccccccCCC
Q 045449 678 -----------------------IISSSLEYLHFGHSI--------PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 726 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~--------~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~ 726 (823)
++.|++.+|+|+|+. +||||||||+|||++.++.+||+|||+|+.....
T Consensus 82 y~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 244666666666654 9999999999999999999999999999876544
Q ss_pred Ccc--ccccccccCCCcCcccccCCC------ccccccceehhhhhhccccCCCCCcCC
Q 045449 727 DQL--SKQTQTLATIGYMAPEYGTKG------RVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 727 ~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
... ......+||+.|||||++.+. .|+.++|||||||++||+++|..|+..
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 322 122346899999999998654 478899999999999999999876643
No 88
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.94 E-value=2e-28 Score=280.76 Aligned_cols=146 Identities=25% Similarity=0.243 Sum_probs=123.4
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH------HHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE------RALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
++|...+.||+|+ |+.||||++.+... ........++++++.++|||||+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5788889999997 67799999975431 12223344567777889999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
+++|++.+|+|+|+.|||||||||+|||++.+|++||+|||+|+......
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~-- 346 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 346 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC--
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC--
Confidence 47899999999999999999999999999999999999999999765432
Q ss_pred ccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCC
Q 045449 730 SKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
..+.+||+.|||||++.+ ..|+.++||||+||++|+|++|..||.+
T Consensus 347 --~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 347 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred --CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 345689999999999965 5799999999999999999999999965
No 89
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.94 E-value=1.1e-28 Score=268.84 Aligned_cols=151 Identities=23% Similarity=0.236 Sum_probs=123.6
Q ss_pred HHhccCCccceeeccC---------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH-----------
Q 045449 625 RATDRFSENNLIGIGN---------------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK----------- 677 (823)
Q Consensus 625 ~at~~f~~~~~lg~g~---------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~----------- 677 (823)
+..++|...+.||+|+ ++.||||++..... ..++.+|++++.++ +|||||+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4567899999999996 34599998865432 24688999999998 6999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC-CcEEEeecccccccCCCCc--
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED-MVAHISDFGIAKLLSGEDQ-- 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~-~~~kl~DfGla~~~~~~~~-- 728 (823)
++.|++.+|+|+|+.||+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 96 ~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~ 175 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175 (361)
T ss_dssp EEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGG
T ss_pred EEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccc
Confidence 47899999999999999999999999999876 7999999999986543211
Q ss_pred ------------------------cccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCC
Q 045449 729 ------------------------LSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 729 ------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
....+..+||+.|||||++.+. .|+.++||||+||++|+|++|+.||..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp GGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 0112345799999999998775 489999999999999999999999854
No 90
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.4e-26 Score=243.28 Aligned_cols=219 Identities=21% Similarity=0.284 Sum_probs=144.1
Q ss_pred CCCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCC
Q 045449 37 TSVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSL 116 (823)
Q Consensus 37 ~~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 116 (823)
.++|.|.|+.|+.. ..++.+++++++++. +|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.|+...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47899999998643 346789999999884 666554 67899999999998777778889999999999999988776
Q ss_pred chhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccC
Q 045449 117 SSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEI 196 (823)
Q Consensus 117 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~i 196 (823)
+..|.++++|++|+|++|++++..+.. |..+++|++|+|++|++++..+.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~-------~~~l~~L~~L~l~~n~l~~~~~~----------------------- 127 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGV-------FDQLVNLAELRLDRNQLKSLPPR----------------------- 127 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTT-------TTTCSSCCEEECCSSCCCCCCTT-----------------------
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhH-------cccccCCCEEECCCCccCeeCHH-----------------------
Confidence 777788888888888888887433322 36777788888887777643222
Q ss_pred CcccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCC
Q 045449 197 PREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNS 276 (823)
Q Consensus 197 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 276 (823)
.|..+++|++|+|++|++++..+..|..++ +|++|+|++|++++..+..|.++
T Consensus 128 --~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-------------------------~L~~L~L~~n~l~~~~~~~~~~l 180 (270)
T 2o6q_A 128 --VFDSLTKLTYLSLGYNELQSLPKGVFDKLT-------------------------SLKELRLYNNQLKRVPEGAFDKL 180 (270)
T ss_dssp --TTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------------------------TCCEEECCSSCCSCCCTTTTTTC
T ss_pred --HhCcCcCCCEEECCCCcCCccCHhHccCCc-------------------------ccceeEecCCcCcEeChhHhccC
Confidence 223334445555555555544444444444 44555555554444444445555
Q ss_pred CCCCeEEeecccccccCCCccCCCcccCcccccCccccCC
Q 045449 277 SKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSS 316 (823)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 316 (823)
++|++|+|++|++++..+..|..+++|+.|+|++|.+...
T Consensus 181 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 181 TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 5555555555555555444555555555566655555543
No 91
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.3e-29 Score=295.43 Aligned_cols=423 Identities=14% Similarity=0.116 Sum_probs=300.6
Q ss_pred CcEEEEEcCCCCCccc---cCc------------ccCCCCCCcEEEccCCCCCCCCCCCCC-CCCCCCEEECCCC-cCcC
Q 045449 52 HRVIGLNISSFNLQGT---ITP------------QLGNLSSLQTLDLSHNKLSGNIPSSIF-NMHTLKLLDFSDN-QLFG 114 (823)
Q Consensus 52 ~~v~~L~L~~~~l~g~---~~~------------~l~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~~ 114 (823)
.+++.|+|+++..... .|. ....+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.
T Consensus 66 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 145 (594)
T 2p1m_B 66 PKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFST 145 (594)
T ss_dssp TTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEH
T ss_pred CCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCH
Confidence 4688899988753211 111 124678999999999999877666665 6899999999999 5654
Q ss_pred C-CchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCc
Q 045449 115 S-LSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTV 193 (823)
Q Consensus 115 ~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~ 193 (823)
. ++..+.++++|++|+|++|.+++..+..+..++ ..+++|++|+|++|. +.+.. ..+..+
T Consensus 146 ~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~---~~~~~L~~L~l~~~~--~~~~~-----~~l~~l--------- 206 (594)
T 2p1m_B 146 DGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP---DTYTSLVSLNISCLA--SEVSF-----SALERL--------- 206 (594)
T ss_dssp HHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC---TTCCCCCEEECTTCC--SCCCH-----HHHHHH---------
T ss_pred HHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh---hcCCcCcEEEecccC--CcCCH-----HHHHHH---------
Confidence 3 455566899999999999999876666553333 467899999999997 22221 112222
Q ss_pred ccCCcccCCcchhhhhccccc-cccCCccccccCCCCCcEEEccCC-------cccccCCcccccCCCCccEE-Eeeccc
Q 045449 194 CEIPREIGNLPYLARLALATN-NLVGVVPVTIFNMSALKEISLLNN-------SLSGSLPSRIDLSLPNVETL-NLGINS 264 (823)
Q Consensus 194 ~~ip~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N-------~l~g~lp~~~~~~l~~L~~L-~Ls~N~ 264 (823)
+.++++|++|++++| .+.+ +|..+.++++|++|+++.+ .+++ ++..+. .+++|+.| .+....
T Consensus 207 ------~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~-~~~~L~~Ls~~~~~~ 277 (594)
T 2p1m_B 207 ------VTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALS-GCKELRCLSGFWDAV 277 (594)
T ss_dssp ------HHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHH-TCTTCCEEECCBTCC
T ss_pred ------HHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHh-cCCCcccccCCcccc
Confidence 123567889999988 4444 7778888899999985544 4442 444443 48889988 444333
Q ss_pred cccccCccccCCCCCCeEEeecccccccCC-CccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeec----
Q 045449 265 FSGTIPSSITNSSKLSDLELGENLFSGFIP-NTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTG---- 339 (823)
Q Consensus 265 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~---- 339 (823)
. +.+|..+..+++|++|+|++|.+++... ..+..+++|+.|++++| ++.. .+......+++|+.|++++
T Consensus 278 ~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~----~l~~l~~~~~~L~~L~L~~~~~~ 351 (594)
T 2p1m_B 278 P-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA----GLEVLASTCKDLRELRVFPSEPF 351 (594)
T ss_dssp G-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH----HHHHHHHHCTTCCEEEEECSCTT
T ss_pred h-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH----HHHHHHHhCCCCCEEEEecCccc
Confidence 2 3456666678899999999998775432 33567899999999988 4321 1222334588999999843
Q ss_pred -----CCCCccCCccccc-cccccceEEecCCcceeccCcccc-CcccccEEEcc--c----CcCCCC-----chhcccc
Q 045449 340 -----NPLDGILPKSIGN-FSLSLETILMANCSISGNIPQVVG-NLSNLLVLELG--G----NNLTGP-----IPVTFSQ 401 (823)
Q Consensus 340 -----N~l~~~~p~~~~~-~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g~-----~p~~~~~ 401 (823)
+.+++.....+.. + ++|++|.++.|.+++..+..+. .+++|+.|+|+ + |++++. ++..+..
T Consensus 352 g~~~~~~l~~~~l~~l~~~~-~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~ 430 (594)
T 2p1m_B 352 VMEPNVALTEQGLVSVSMGC-PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEH 430 (594)
T ss_dssp CSSCSSCCCHHHHHHHHHHC-TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhc-hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhh
Confidence 5555433333332 4 6899999999999877666665 58999999999 4 666632 2233677
Q ss_pred cCCCCEEEccCCCCCCcchHhhhc-CCCCCEEEcccCcCcccccccc-cCCCCCCeEeccCCccccccch-hhhccCCCc
Q 045449 402 LQTLQAFDLTRNKLAGPITDELCH-LARLHSLVLQGNKFSGSIPSCL-GNLTSVRVLYLGLNIFTSVLSS-TIWNLKDIL 478 (823)
Q Consensus 402 l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~ 478 (823)
+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... .+..+++|+
T Consensus 431 ~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~ 509 (594)
T 2p1m_B 431 CKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMR 509 (594)
T ss_dssp CTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSS
T ss_pred CCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCC
Confidence 89999999987 787776666665 8999999999999987766655 6789999999999999765554 445689999
Q ss_pred EEeccccccccccCccc-cCCCCCcEEEcccCC
Q 045449 479 FIDVSSNFLDGPLSLDI-GNLKVVIGLDFSRNN 510 (823)
Q Consensus 479 ~LdLs~N~l~g~~p~~~-~~l~~L~~L~ls~N~ 510 (823)
.|++++|.++......+ ..++.|+...+..+.
T Consensus 510 ~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 510 SLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp EEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred EEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 99999999965544444 456777666665543
No 92
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.94 E-value=4.8e-28 Score=279.78 Aligned_cols=149 Identities=23% Similarity=0.310 Sum_probs=131.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||+|+ |+.||||++........+.+.+|+++|++++|||||+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 36788889999986 6779999997666566678999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC--CcEEEeecccccccCCCCcccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED--MVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~--~~~kl~DfGla~~~~~~~~~~~ 731 (823)
+++|++++|+|+|+++|+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~--- 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--- 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE---
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc---
Confidence 46899999999999999999999999999854 8999999999998754432
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|||||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 34568999999999999999999999999999999999999999764
No 93
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1e-25 Score=237.38 Aligned_cols=229 Identities=17% Similarity=0.191 Sum_probs=106.1
Q ss_pred EEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCc
Q 045449 232 EISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADN 311 (823)
Q Consensus 232 ~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 311 (823)
.++..+..++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 3444555554 4554332 34555555555555544445555555555555555555444444444444444333333
Q ss_pred cccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcC
Q 045449 312 YLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNL 391 (823)
Q Consensus 312 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 391 (823)
.+ ++..|..+.++ .+|++|++++|.+++..+..+..+++|++|++++|++
T Consensus 87 ~l-----------------------------~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 136 (276)
T 2z62_A 87 PI-----------------------------QSLALGAFSGL-SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136 (276)
T ss_dssp CC-----------------------------CEECTTTTTTC-TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred cc-----------------------------CccChhhhcCC-ccccEEECCCCCccccCchhcccCCCCCEEECcCCcc
Confidence 33 33223333333 2333333333333333333344444444444444444
Q ss_pred CCC-chhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCC-eEeccCCccccccch
Q 045449 392 TGP-IPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVR-VLYLGLNIFTSVLSS 469 (823)
Q Consensus 392 ~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~ 469 (823)
++. +|..|..+++|++|+|++|++++..+..+..+.+|+ .|. .|++++|.+++..+.
T Consensus 137 ~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---------------------~l~l~L~ls~n~l~~~~~~ 195 (276)
T 2z62_A 137 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP---------------------LLNLSLDLSLNPMNFIQPG 195 (276)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT---------------------TCCEEEECCSSCCCEECTT
T ss_pred ceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc---------------------ccceeeecCCCcccccCcc
Confidence 432 344444444444444444444444333333333333 000 445555555443333
Q ss_pred hhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCC
Q 045449 470 TIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 470 ~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
.+. ..+|+.|++++|.+++..+..+..++.|+.|++++|++++..|
T Consensus 196 ~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 196 AFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 222 2245555555555555444445556666666666666665544
No 94
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.8e-25 Score=235.50 Aligned_cols=209 Identities=23% Similarity=0.220 Sum_probs=155.8
Q ss_pred CceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEc
Q 045449 331 KLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDL 410 (823)
Q Consensus 331 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 410 (823)
+|+.|++++|.+++..+..|..+ ++|++|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSF-PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTC-TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhccc-cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35555555555555544455555 46666666666666666667777777777788877777666677777788888888
Q ss_pred cCCCCCCcchHhhhcCCCCCEEEcccCcCccc-ccccccCCCCCCeEeccCCccccccchhhhccCCCc----EEecccc
Q 045449 411 TRNKLAGPITDELCHLARLHSLVLQGNKFSGS-IPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDIL----FIDVSSN 485 (823)
Q Consensus 411 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~LdLs~N 485 (823)
++|++++..+..+..+++|++|++++|.+++. +|..+.++++|+.|+|++|++++..+..+..+..|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 88888776666677888888888888888763 588888888888888888888888788887777777 8999999
Q ss_pred ccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCcccCCCCC
Q 045449 486 FLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELLCGLPD 549 (823)
Q Consensus 486 ~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~c~~~~ 549 (823)
.+++..+..+.. ..|+.|++++|++++..+..+ ..+..+..+.+.+|++.|..+.
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~--------~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIF--------DRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTT--------TTCCSCCEEECCSSCBCCCTTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHh--------cccccccEEEccCCcccccCCc
Confidence 999776655544 489999999999995433222 2356778889999999998664
No 95
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.6e-25 Score=235.37 Aligned_cols=228 Identities=22% Similarity=0.270 Sum_probs=138.3
Q ss_pred cchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeE
Q 045449 203 LPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDL 282 (823)
Q Consensus 203 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 282 (823)
+..+..+++..+.+... ..+..+++|+.|++++|.++ .++. +. .+++|++|+|++|++++. +.+..+++|++|
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~~-l~-~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 90 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQG-IQ-YLPNVRYLALGGNKLHDI--SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCTT-GG-GCTTCCEEECTTSCCCCC--GGGTTCTTCCEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-cccc-cc-cCCCCcEEECCCCCCCCc--hhhcCCCCCCEE
Confidence 34566777777777654 34567788888888888887 4443 33 378888888888888753 467788888888
Q ss_pred EeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEe
Q 045449 283 ELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILM 362 (823)
Q Consensus 283 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L 362 (823)
+|++|.+++..+..|..+++|++|++++|++++.+ +..+.++++|++|++++|.+++..|..+
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~n~l~~~~~~~~------------ 153 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP-----DGVFDKLTNLTYLNLAHNQLQSLPKGVF------------ 153 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC-----TTTTTTCTTCCEEECCSSCCCCCCTTTT------------
T ss_pred ECCCCccCccChhHhcCCcCCCEEECCCCcCCccC-----HHHhccCCCCCEEECCCCccCccCHHHh------------
Confidence 88888888777777777777777777777776652 2335555566666666665554444444
Q ss_pred cCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccc
Q 045449 363 ANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS 442 (823)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 442 (823)
..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.+.
T Consensus 154 -------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 154 -------------DKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp -------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -------------ccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 4444455555555555444444444455555555555555544444444555555555555544432
Q ss_pred ccccccCCCCCCeEeccCCccccccchhhhcc
Q 045449 443 IPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNL 474 (823)
Q Consensus 443 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 474 (823)
++.|+.|+++.|.++|.+|.+++.+
T Consensus 221 -------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 221 -------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp -------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred -------CcHHHHHHHHHHhCCCcccCccccc
Confidence 2244555555555555555555443
No 96
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=7.5e-26 Score=237.86 Aligned_cols=158 Identities=23% Similarity=0.200 Sum_probs=88.9
Q ss_pred ccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcc
Q 045449 356 SLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQ 435 (823)
Q Consensus 356 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 435 (823)
+|++|++++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 86 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 165 (272)
T 3rfs_A 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLS 165 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECC
Confidence 34444444444443444444555555555555555555444445555555555555555555555455555556666666
Q ss_pred cCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCC
Q 045449 436 GNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDI 515 (823)
Q Consensus 436 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~i 515 (823)
+|++++..|..++.+++|+.|+|++|++++..|..+..+++|+.|++++|.+++.. +.|+.|+++.|+++|.|
T Consensus 166 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 166 YNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVV 238 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGB
T ss_pred CCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcc
Confidence 66665555555555666666666666666655555566666666666666665433 34666666677777666
Q ss_pred CCccc
Q 045449 516 PITIG 520 (823)
Q Consensus 516 p~~~~ 520 (823)
|.+++
T Consensus 239 p~~~~ 243 (272)
T 3rfs_A 239 RNSAG 243 (272)
T ss_dssp BCTTS
T ss_pred cCccc
Confidence 66553
No 97
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=3.5e-26 Score=250.91 Aligned_cols=183 Identities=15% Similarity=0.155 Sum_probs=105.1
Q ss_pred hccccccccCCccccccCCCCCcEEEccCCcccccCCc---ccccCCC-CccEEEeeccccccccCccccCC-----CCC
Q 045449 209 LALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPS---RIDLSLP-NVETLNLGINSFSGTIPSSITNS-----SKL 279 (823)
Q Consensus 209 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~---~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 279 (823)
++++.|++++.+|..+...++|++|+|++|.+++..+. ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 56788888888887777777788888888888744331 2223466 78888888888877666666664 778
Q ss_pred CeEEeecccccccCCCccCC----C-cccCcccccCccccCCCCcccccccccC-CCCceEEEeecCCCCccCCc----c
Q 045449 280 SDLELGENLFSGFIPNTIGN----L-RNLEFGNIADNYLTSSTPELSFLSSLTN-CKKLKVLIVTGNPLDGILPK----S 349 (823)
Q Consensus 280 ~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~~~~l~~-l~~L~~L~Ls~N~l~~~~p~----~ 349 (823)
++|+|++|++++..+..+.. + ++|++|+|++|.+++..... +...+.. .++|++|+|++|.+++..+. .
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~-l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSE-FKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH-HHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHH-HHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 88888888877666554333 2 66677777777666542211 1122333 24566666666666543222 2
Q ss_pred ccccccccceEEecCCcceeccCccccC----c-ccccEEEcccCcCC
Q 045449 350 IGNFSLSLETILMANCSISGNIPQVVGN----L-SNLLVLELGGNNLT 392 (823)
Q Consensus 350 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~ 392 (823)
+...+.+|++|+|++|++++..+..+.. + ++|++|||++|+++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~ 209 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLG 209 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCC
Confidence 2222224445555555444433332221 2 34444444444444
No 98
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.92 E-value=5.6e-27 Score=262.22 Aligned_cols=159 Identities=19% Similarity=0.261 Sum_probs=133.2
Q ss_pred CHHHHHHHhccCCccceeeccC------------CeEEEEEEehHhhHHH---HHHHHHHHHHHhhcchhhHHH------
Q 045449 619 SYHELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQYERA---LKSFEDECEVRKRIRHRNLVK------ 677 (823)
Q Consensus 619 ~~~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~------ 677 (823)
.+.++...+++|...+.||+|+ ++.||||++....... .+.+.+|+.++.+++||||++
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 4555566678999999999996 5679999997643221 234899999999999999998
Q ss_pred -----------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 678 -----------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 678 -----------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 467899999999999999999999999999999999999999987
Q ss_pred cCCCCccccccccccCCCcCcccccC-----CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 723 LSGEDQLSKQTQTLATIGYMAPEYGT-----KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 723 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...... ......+||+.|+|||++. .+.|+.++||||+||++|+|++|..||.+.
T Consensus 225 ~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 225 LMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp CCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 654332 2234468999999999986 567899999999999999999999999764
No 99
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=7.6e-24 Score=222.31 Aligned_cols=184 Identities=21% Similarity=0.194 Sum_probs=115.8
Q ss_pred ceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEcc
Q 045449 332 LKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLT 411 (823)
Q Consensus 332 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 411 (823)
|+.|++++|.+++..+..|..+ .+|++|++++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 39 l~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 39 TKKLDLQSNKLSSLPSKAFHRL-TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp CSEEECCSSCCSCCCTTSSSSC-TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCEEECcCCCCCeeCHHHhcCC-CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 4444444444444444444444 455555555555554444555666666666666666665555556666666666666
Q ss_pred CCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccccc
Q 045449 412 RNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPL 491 (823)
Q Consensus 412 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~ 491 (823)
+|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 66666666666666666777777777666555555666677777777777777666666666777777777777777655
Q ss_pred CccccCCCCCcEEEcccCCCCCCCC
Q 045449 492 SLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 492 p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
+..+..++.|+.|++++|.+.+..+
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HHHhccccCCCEEEecCCCeeCCCc
Confidence 5556677777777777777765443
No 100
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.91 E-value=7.1e-26 Score=244.14 Aligned_cols=162 Identities=24% Similarity=0.297 Sum_probs=137.2
Q ss_pred ccccCHHHHHHHhcc----------CCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcch
Q 045449 615 IRRFSYHELLRATDR----------FSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRH 672 (823)
Q Consensus 615 ~~~~~~~~l~~at~~----------f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 672 (823)
.+.++++++.++++. |...+.||.|+ |+.||||++........+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 356999999999875 55667899886 67799999976554555779999999999999
Q ss_pred hhHHH---------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEE
Q 045449 673 RNLVK---------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAH 713 (823)
Q Consensus 673 ~niv~---------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~k 713 (823)
|||++ ++.|++.+|+|+|+.+|+||||||+||+++.++.+|
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 181 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK 181 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEE
Confidence 99998 367888999999999999999999999999999999
Q ss_pred EeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 714 ISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 714 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
|+|||+++....... ......||+.|+|||++.+..++.++|||||||+++++++|..||...
T Consensus 182 l~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~ 244 (321)
T 2c30_A 182 LSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244 (321)
T ss_dssp ECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred EeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999987654322 234567999999999999999999999999999999999999998654
No 101
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=8e-26 Score=250.44 Aligned_cols=249 Identities=19% Similarity=0.250 Sum_probs=171.4
Q ss_pred cCCcccccCCCCccEEEeeccccccccC----ccccCCCCCCeEEeecc---cccccCCCccCCCcccCcccccCccccC
Q 045449 243 SLPSRIDLSLPNVETLNLGINSFSGTIP----SSITNSSKLSDLELGEN---LFSGFIPNTIGNLRNLEFGNIADNYLTS 315 (823)
Q Consensus 243 ~lp~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 315 (823)
.++..+.. +++|++|+|++|+++...+ ..+..+++|++|+|++| ++++.+|..+..
T Consensus 23 ~l~~~l~~-~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~---------------- 85 (386)
T 2ca6_A 23 SVFAVLLE-DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRL---------------- 85 (386)
T ss_dssp TTSHHHHH-CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHH----------------
T ss_pred HHHHHHhc-CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHH----------------
Confidence 44444443 6677777777777765433 33556667777777764 344444443310
Q ss_pred CCCcccccccccCCCCceEEEeecCCCCc----cCCccccccccccceEEecCCcceeccCcccc----Cc---------
Q 045449 316 STPELSFLSSLTNCKKLKVLIVTGNPLDG----ILPKSIGNFSLSLETILMANCSISGNIPQVVG----NL--------- 378 (823)
Q Consensus 316 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~----~l--------- 378 (823)
+...+..+++|++|+|++|.+++ .+|..+..+ ++|++|+|++|.+++..+..+. .+
T Consensus 86 ------l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~-~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~ 158 (386)
T 2ca6_A 86 ------LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH-TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNA 158 (386)
T ss_dssp ------HHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHC-TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ------HHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhC-CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccC
Confidence 11123444555555555555544 244444444 4555555555555433332222 23
Q ss_pred ccccEEEcccCcCC-CCch---hcccccCCCCEEEccCCCCC--C---cchHhhhcCCCCCEEEcccCcCc----ccccc
Q 045449 379 SNLLVLELGGNNLT-GPIP---VTFSQLQTLQAFDLTRNKLA--G---PITDELCHLARLHSLVLQGNKFS----GSIPS 445 (823)
Q Consensus 379 ~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----g~~p~ 445 (823)
++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++ | ..+..+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 88999999999997 4455 46778889999999999998 3 34447888999999999999996 67888
Q ss_pred cccCCCCCCeEeccCCccccc----cchhhh--ccCCCcEEecccccccc----ccCccc-cCCCCCcEEEcccCCCCCC
Q 045449 446 CLGNLTSVRVLYLGLNIFTSV----LSSTIW--NLKDILFIDVSSNFLDG----PLSLDI-GNLKVVIGLDFSRNNLSGD 514 (823)
Q Consensus 446 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~LdLs~N~l~g----~~p~~~-~~l~~L~~L~ls~N~l~g~ 514 (823)
.+..+++|+.|+|++|.+++. +|..+. .+++|+.|+|++|.+++ .+|..+ .+++.|+.|++++|++++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 899999999999999999886 566663 38999999999999998 588877 6789999999999999854
Q ss_pred C
Q 045449 515 I 515 (823)
Q Consensus 515 i 515 (823)
.
T Consensus 319 ~ 319 (386)
T 2ca6_A 319 D 319 (386)
T ss_dssp S
T ss_pred h
Confidence 3
No 102
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=7.4e-26 Score=245.71 Aligned_cols=212 Identities=18% Similarity=0.239 Sum_probs=142.8
Q ss_pred CCCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCC--CCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcC
Q 045449 37 TSVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNL--SSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFG 114 (823)
Q Consensus 37 ~~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 114 (823)
.-|.+|.++.|+. ..++.||++++.+. +..+..+ +++++|++++|.+.+..+. +..+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 4566899999873 35789999999887 4556677 8999999999999977665 5679999999999999987
Q ss_pred C-CchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccc-eeecc-CccccccchhhHHHHHhhcCC
Q 045449 115 S-LSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFN-NLSGA-IPKEIGNLTKLKEIISTITNS 191 (823)
Q Consensus 115 ~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~~l~~n~ 191 (823)
. +|..+..+++|++|+|++|.+++..+..+ ..+++|++|+|++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l-------~~~~~L~~L~L~~~~~l~~~~l~------------------- 161 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTL-------AKNSNLVRLNLSGCSGFSEFALQ------------------- 161 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHH-------TTCTTCSEEECTTCBSCCHHHHH-------------------
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHH-------hcCCCCCEEECCCCCCCCHHHHH-------------------
Confidence 6 88889999999999999999887766666 67889999999998 56531 11
Q ss_pred CcccCCcccCCcchhhhhccccc-cccCC-ccccccCCC-CCcEEEccCC--ccc-ccCCcccccCCCCccEEEeeccc-
Q 045449 192 TVCEIPREIGNLPYLARLALATN-NLVGV-VPVTIFNMS-ALKEISLLNN--SLS-GSLPSRIDLSLPNVETLNLGINS- 264 (823)
Q Consensus 192 ~~~~ip~~l~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-g~lp~~~~~~l~~L~~L~Ls~N~- 264 (823)
..+.++++|++|++++| ++++. ++..+..++ +|++|++++| .++ +.+|..+.. +++|++|+|++|.
T Consensus 162 ------~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~-~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 162 ------TLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR-CPNLVHLDLSDSVM 234 (336)
T ss_dssp ------HHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH-CTTCSEEECTTCTT
T ss_pred ------HHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhh-CCCCCEEeCCCCCc
Confidence 11223445566666666 66543 344455555 5666666655 233 233332222 4455555555554
Q ss_pred cccccCccccCCCCCCeEEeecc
Q 045449 265 FSGTIPSSITNSSKLSDLELGEN 287 (823)
Q Consensus 265 l~~~~p~~~~~l~~L~~L~Ls~N 287 (823)
+++..+..+..+++|++|++++|
T Consensus 235 l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 235 LKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCHHHHHHHhCCCCCCEeeCCCC
Confidence 44444444444444444444444
No 103
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.91 E-value=1.1e-25 Score=243.85 Aligned_cols=149 Identities=22% Similarity=0.280 Sum_probs=127.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||+|+ |+.||||+++... ....+.+.+|++++++++||||++
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5778888899886 6679999997653 223467899999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+....... ..
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~ 162 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TM 162 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC--CB
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC--cc
Confidence 367899999999999999999999999999999999999999986432221 23
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence 4568999999999999999999999999999999999999999654
No 104
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=9.3e-24 Score=223.76 Aligned_cols=204 Identities=21% Similarity=0.239 Sum_probs=142.2
Q ss_pred ccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCccc
Q 045449 224 IFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNL 303 (823)
Q Consensus 224 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 303 (823)
+.++++++++++++|.++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..+. +.+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 556677777777777777 6665543 4677777777777766667777777777777777777654332 445555
Q ss_pred CcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccE
Q 045449 304 EFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLV 383 (823)
Q Consensus 304 ~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 383 (823)
++|+|++|+++. +|..+..+ ++|++|++++|+|++..|..|.++++|++
T Consensus 80 ~~L~Ls~N~l~~------------------------------l~~~~~~l-~~L~~L~l~~N~l~~l~~~~~~~l~~L~~ 128 (290)
T 1p9a_G 80 GTLDLSHNQLQS------------------------------LPLLGQTL-PALTVLDVSFNRLTSLPLGALRGLGELQE 128 (290)
T ss_dssp CEEECCSSCCSS------------------------------CCCCTTTC-TTCCEEECCSSCCCCCCSSTTTTCTTCCE
T ss_pred CEEECCCCcCCc------------------------------CchhhccC-CCCCEEECCCCcCcccCHHHHcCCCCCCE
Confidence 555555555443 34444444 45666666666666666667777777888
Q ss_pred EEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCcc
Q 045449 384 LELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIF 463 (823)
Q Consensus 384 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 463 (823)
|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+
T Consensus 129 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred EECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 888888887666666777888888888888888666666777888888888888887 6777777777888888888887
Q ss_pred cc
Q 045449 464 TS 465 (823)
Q Consensus 464 ~~ 465 (823)
..
T Consensus 208 ~C 209 (290)
T 1p9a_G 208 LC 209 (290)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 105
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.91 E-value=1e-25 Score=243.23 Aligned_cols=149 Identities=28% Similarity=0.393 Sum_probs=128.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |+.||||++.... ....+++.+|++++++++||||++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788888999886 6779999996542 445678999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---L 170 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG---G
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc---c
Confidence 467899999999999999999999999999999999999999987654322 3
Q ss_pred cccccCCCcCcccccCCCccc-cccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVS-TRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~-~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..+. .++||||+||++|++++|..||.+.
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 456799999999999887764 7899999999999999999999764
No 106
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.5e-25 Score=245.99 Aligned_cols=231 Identities=17% Similarity=0.225 Sum_probs=130.5
Q ss_pred EEEccCCcccccCCcccccCCCCccEEEeeccccccccC----ccccCCC-CCCeEEeecccccccCCCccCCC-----c
Q 045449 232 EISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIP----SSITNSS-KLSDLELGENLFSGFIPNTIGNL-----R 301 (823)
Q Consensus 232 ~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 301 (823)
++.++.|.++|.+|..+.. .++|++|||++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~-~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSI-PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTS-CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhC-CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 4677888888777765443 5558888888888876665 6667777 78888888888887766666664 7
Q ss_pred ccCcccccCccccCCCCcccccccccCC-CCceEEEeecCCCCccCCcccccc----ccccceEEecCCcceecc----C
Q 045449 302 NLEFGNIADNYLTSSTPELSFLSSLTNC-KKLKVLIVTGNPLDGILPKSIGNF----SLSLETILMANCSISGNI----P 372 (823)
Q Consensus 302 ~L~~L~L~~N~l~~~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~~----~~~L~~L~L~~N~l~~~~----p 372 (823)
+|++|+|++|.+++..+.. +...+..+ ++|+.|+|++|.+++..+..+... +.+|++|+|++|.+++.. +
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~-l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDE-LVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TCCEEECCSSCGGGSCHHH-HHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CccEEECcCCcCChHHHHH-HHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 7777777777777653211 12223444 667777777777766555443321 235566666666555322 2
Q ss_pred ccccCcc-cccEEEcccCcCCCCchhcccc----c-CCCCEEEccCCCCCCc----chHhhhc-CCCCCEEEcccCcCcc
Q 045449 373 QVVGNLS-NLLVLELGGNNLTGPIPVTFSQ----L-QTLQAFDLTRNKLAGP----ITDELCH-LARLHSLVLQGNKFSG 441 (823)
Q Consensus 373 ~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~g 441 (823)
..+..++ +|++|+|++|++++..+..+.. . ++|++|+|++|++++. ++..+.. .++|++|+|++|.+++
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 2223333 5555555555555444433322 2 3555555555555542 2333333 2355555555555554
Q ss_pred ccc----ccccCCCCCCeEeccCCccc
Q 045449 442 SIP----SCLGNLTSVRVLYLGLNIFT 464 (823)
Q Consensus 442 ~~p----~~~~~l~~L~~L~Ls~N~l~ 464 (823)
..+ ..+..+++|+.|+|++|.+.
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHHHHHHHhcCCCccEEEeccCCcc
Confidence 332 22344455555555555533
No 107
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.2e-23 Score=223.00 Aligned_cols=178 Identities=19% Similarity=0.197 Sum_probs=101.4
Q ss_pred ceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEcc
Q 045449 332 LKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLT 411 (823)
Q Consensus 332 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 411 (823)
++.|+|++|.+++..|..|..+ .+|++|++++|.+++..+. +.+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 33 l~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 33 TTILHLSENLLYTFSLATLMPY-TRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp CCEEECTTSCCSEEEGGGGTTC-TTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCEEEcCCCcCCccCHHHhhcC-CCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 3444444444444444444444 3444444444444433222 45556666666666665 455555666666666666
Q ss_pred CCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccccc
Q 045449 412 RNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPL 491 (823)
Q Consensus 412 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~ 491 (823)
+|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~i 187 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TI 187 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-cc
Confidence 66666555555666666666666666666555555566666666666666666555555556666666666666665 45
Q ss_pred CccccCCCCCcEEEcccCCCCCC
Q 045449 492 SLDIGNLKVVIGLDFSRNNLSGD 514 (823)
Q Consensus 492 p~~~~~l~~L~~L~ls~N~l~g~ 514 (823)
|..+..+..|+.|++++|.+.+.
T Consensus 188 p~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 188 PKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTTTTTCCCSEEECCSCCBCCS
T ss_pred ChhhcccccCCeEEeCCCCccCc
Confidence 55555566666666666666543
No 108
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.91 E-value=1e-25 Score=240.07 Aligned_cols=150 Identities=27% Similarity=0.382 Sum_probs=129.8
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++........+.+.+|+.++++++||||++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35788888899886 5679999997655444577999999999999999998
Q ss_pred ----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccccc
Q 045449 678 ----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQT 735 (823)
Q Consensus 678 ----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 735 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 176 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTM 176 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CBCCC
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--ccCCc
Confidence 367889999999999999999999999999999999999999987654332 23456
Q ss_pred ccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 736 LATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 736 ~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.||+.|+|||++.+..++.++||||+||++|++++|..||...
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 219 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 219 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7999999999999999999999999999999999999999664
No 109
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.91 E-value=3.7e-25 Score=239.42 Aligned_cols=148 Identities=24% Similarity=0.378 Sum_probs=126.6
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHH---HHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYER---ALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++...... ..+.+.+|++++++++||||++
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5778888888886 567999999765322 2357899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 89 E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~---~~ 165 (336)
T 3h4j_B 89 EYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LK 165 (336)
T ss_dssp CCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT---TC
T ss_pred ECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc---cc
Confidence 467899999999999999999999999999999999999999987654322 34
Q ss_pred ccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..+||+.|+|||++.+..+ +.++||||+||++|++++|..||.+.
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 4679999999999988776 78999999999999999999999764
No 110
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.91 E-value=1.4e-25 Score=240.34 Aligned_cols=151 Identities=28% Similarity=0.407 Sum_probs=120.0
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....++|.+|++++++++||||++
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred hhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence 46788888999986 6679999986443 445578999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCC--EEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 --------------------------IISSSLEYLHFGHSIP--IIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~--ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-- 193 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-- 193 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc--
Confidence 3568899999999999 9999999999999999999999999998653322
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.......||+.|+|||++.+..++.++||||+||++|++++|..||....
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 12334679999999999999999999999999999999999999997653
No 111
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.91 E-value=2.5e-25 Score=238.70 Aligned_cols=152 Identities=26% Similarity=0.363 Sum_probs=127.7
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||+|++........+.|.+|++++++++||||++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 35677788888886 5679999987666667789999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc---
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS--- 730 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~--- 730 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 35788999999999999999999999999999999999999998764332211
Q ss_pred ---------cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 ---------KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..++.++|||||||++|++++|..|+...
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~ 225 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence 111457999999999999999999999999999999999999887654
No 112
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.6e-25 Score=248.12 Aligned_cols=249 Identities=19% Similarity=0.250 Sum_probs=166.7
Q ss_pred CccccccCCCCCcEEEccCCcccccCCccc---ccCCCCccEEEeecc---ccccccCccc-------cCCCCCCeEEee
Q 045449 219 VVPVTIFNMSALKEISLLNNSLSGSLPSRI---DLSLPNVETLNLGIN---SFSGTIPSSI-------TNSSKLSDLELG 285 (823)
Q Consensus 219 ~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~---~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls 285 (823)
.++..+..+++|++|+|++|.+++..+..+ ...+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 355677788999999999999986544332 224899999999995 5566667665 678888899999
Q ss_pred cccccc----cCCCccCCCcccCcccccCccccCCCCcccccccccCC---------CCceEEEeecCCCCccCCccccc
Q 045449 286 ENLFSG----FIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNC---------KKLKVLIVTGNPLDGILPKSIGN 352 (823)
Q Consensus 286 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l---------~~L~~L~Ls~N~l~~~~p~~~~~ 352 (823)
+|.+++ .+|..+..+++|++|+|++|.++...+. .+...+..+ ++|+.|++++|+++.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~-------- 173 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGA-KIARALQELAVNKKAKNAPPLRSIICGRNRLEN-------- 173 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHH-HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG--------
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHH-HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc--------
Confidence 888887 4566667777777777777776543111 012222222 455555555555441
Q ss_pred cccccceEEecCCcceeccC---ccccCcccccEEEcccCcCC--C---CchhcccccCCCCEEEccCCCCC----Ccch
Q 045449 353 FSLSLETILMANCSISGNIP---QVVGNLSNLLVLELGGNNLT--G---PIPVTFSQLQTLQAFDLTRNKLA----GPIT 420 (823)
Q Consensus 353 ~~~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p 420 (823)
+.+| ..+..+++|++|+|++|+++ | .+|..+..+++|++|+|++|.++ +.+|
T Consensus 174 ----------------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 174 ----------------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp ----------------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHH
Confidence 2222 34455666777777777766 2 23436667777777777777775 4566
Q ss_pred HhhhcCCCCCEEEcccCcCccc----ccccc--cCCCCCCeEeccCCcccc----ccchhh-hccCCCcEEecccccccc
Q 045449 421 DELCHLARLHSLVLQGNKFSGS----IPSCL--GNLTSVRVLYLGLNIFTS----VLSSTI-WNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 421 ~~~~~l~~L~~L~Ls~N~l~g~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~LdLs~N~l~g 489 (823)
..+..+++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|++++|.+++
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 6677777777777777777655 45555 337778888888888777 466666 557888888888888877
Q ss_pred ccC
Q 045449 490 PLS 492 (823)
Q Consensus 490 ~~p 492 (823)
..+
T Consensus 318 ~~~ 320 (386)
T 2ca6_A 318 EDD 320 (386)
T ss_dssp TSH
T ss_pred chh
Confidence 664
No 113
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.91 E-value=1.3e-25 Score=249.20 Aligned_cols=158 Identities=20% Similarity=0.221 Sum_probs=131.8
Q ss_pred HHHHHHHhccCCccceeeccC------------CeEEEEEEehHhhHH---HHHHHHHHHHHHhhcchhhHHH-------
Q 045449 620 YHELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQYER---ALKSFEDECEVRKRIRHRNLVK------- 677 (823)
Q Consensus 620 ~~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~------- 677 (823)
+.++....++|...+.||+|+ +..||||++...... ..+.+.+|+++++.++|||||+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 344555678899999999986 567999999754321 1235889999999999999998
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCC
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~ 725 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++++||+|||+|+....
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence 467899999999999999999999999999999999999999987654
Q ss_pred CCccccccccccCCCcCcccccCCCc----cccccceehhhhhhccccCCCCCcCCC
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTKGR----VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... ......+||+.|+|||++.+.. |+.++||||+||++|+|++|..||.+.
T Consensus 221 ~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 276 (410)
T 3v8s_A 221 EGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276 (410)
T ss_dssp TSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC
Confidence 332 2234568999999999987655 889999999999999999999999654
No 114
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.90 E-value=7.7e-26 Score=243.98 Aligned_cols=162 Identities=36% Similarity=0.516 Sum_probs=137.1
Q ss_pred ccCHHHHHHHhccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------
Q 045449 617 RFSYHELLRATDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------- 677 (823)
Q Consensus 617 ~~~~~~l~~at~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 677 (823)
++++.++..++++|...+.||.|+ +..||||++........+.|.+|++++++++||||++
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 455566677889999999999886 5679999987665556678999999999999999998
Q ss_pred ------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccccc
Q 045449 678 ------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAK 721 (823)
Q Consensus 678 ------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~ 721 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 35688899999999999999999999999999999999999998
Q ss_pred ccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 722 LLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 722 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...............||+.|+|||++.+..++.++|||||||++|++++|+.||.+.
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~ 244 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence 754333322334456999999999998889999999999999999999999998654
No 115
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.90 E-value=2.2e-25 Score=247.46 Aligned_cols=160 Identities=21% Similarity=0.285 Sum_probs=133.6
Q ss_pred cCHHHHHHHhccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH-----
Q 045449 618 FSYHELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK----- 677 (823)
Q Consensus 618 ~~~~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~----- 677 (823)
++++++....++|...+.||+|+ |+.||||++..... ...+.+.+|++++.+++||||++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 44555566678999999999986 66799999975432 22346889999999999999998
Q ss_pred ------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccccc
Q 045449 678 ------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAK 721 (823)
Q Consensus 678 ------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~ 721 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++++||+|||+|+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence 46789999999999999999999999999999999999999998
Q ss_pred ccCCCCccccccccccCCCcCcccccC-------CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 722 LLSGEDQLSKQTQTLATIGYMAPEYGT-------KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 722 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....... ......+||+.|+|||++. ...|+.++||||+||++|+|++|..||...
T Consensus 211 ~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 211 KLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp ECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred eccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 7654332 1223468999999999986 457899999999999999999999999664
No 116
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.90 E-value=3.9e-25 Score=250.11 Aligned_cols=149 Identities=28% Similarity=0.322 Sum_probs=124.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ ++.||||++... .....+++.+|+.++++++|||||+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788889999986 567999999653 3445678999999999999999997
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+......
T Consensus 141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 218 (464)
T 3ttj_A 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 218 (464)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--
T ss_pred eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--
Confidence 36789999999999999999999999999999999999999998764332
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||++|++++|+.||.+.
T Consensus 219 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 219 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp -CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 234568999999999999999999999999999999999999999764
No 117
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.90 E-value=3.4e-25 Score=243.63 Aligned_cols=147 Identities=30% Similarity=0.355 Sum_probs=125.9
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|++++++++|||||+
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5788888999886 5669999997543 223467889999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
+++|++.+|+|+|+.||+||||||+|||++.++.+||+|||+|+...... ..
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~~ 171 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---QI 171 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC---CB
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC---ce
Confidence 46799999999999999999999999999999999999999998765432 23
Q ss_pred cccccCCCcCcccccCC---CccccccceehhhhhhccccCCCCCcCC
Q 045449 733 TQTLATIGYMAPEYGTK---GRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
...+||+.|+|||++.. ..|+.++||||+||++|++++|..||..
T Consensus 172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~ 219 (384)
T 4fr4_A 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219 (384)
T ss_dssp CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence 45689999999999864 4589999999999999999999999964
No 118
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.90 E-value=1.5e-25 Score=242.26 Aligned_cols=163 Identities=37% Similarity=0.534 Sum_probs=137.2
Q ss_pred ccccccCHHHHHHHhccCCccceeeccC-----------CeEEEEEEehHhhH-HHHHHHHHHHHHHhhcchhhHHH---
Q 045449 613 QAIRRFSYHELLRATDRFSENNLIGIGN-----------GMEVAVKVFHQQYE-RALKSFEDECEVRKRIRHRNLVK--- 677 (823)
Q Consensus 613 ~~~~~~~~~~l~~at~~f~~~~~lg~g~-----------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~--- 677 (823)
...+.|++.++..++++|...+.||.|+ +..||||++..... .....|.+|++++++++||||++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 4567899999999999999999999986 56699999975542 22237899999999999999998
Q ss_pred -----------------------------------------HHHHHHHHhhhcCCC---CEEeccCCCCCEEeCCCCcEE
Q 045449 678 -----------------------------------------IISSSLEYLHFGHSI---PIIHCDLKPSNVLLDEDMVAH 713 (823)
Q Consensus 678 -----------------------------------------~~~~~l~~L~~~h~~---~ivHrdlk~~NiLl~~~~~~k 713 (823)
++.|++.+|+|+|+. +|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 345677777778877 999999999999999999999
Q ss_pred EeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcC
Q 045449 714 ISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVG 776 (823)
Q Consensus 714 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~ 776 (823)
|+|||+++....... .......||+.|+|||++.+..++.++||||+||+++++++|..||.
T Consensus 175 l~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp ECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred eccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 999999987643332 22344569999999999988889999999999999999999999985
No 119
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.90 E-value=2.5e-25 Score=242.64 Aligned_cols=150 Identities=24% Similarity=0.250 Sum_probs=124.1
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhc-chhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRI-RHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~------------- 677 (823)
.++|...+.||+|+ +..||||++.... ....+.+.+|++++.++ +||||++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46888889999986 5679999997653 23446788999999988 7999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++++||+|||+|+...... .
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~--~ 179 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG--V 179 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC--c
Confidence 46789999999999999999999999999999999999999998643222 2
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||++|+|++|..||...
T Consensus 180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 234568999999999999889999999999999999999999999654
No 120
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.90 E-value=6e-25 Score=249.16 Aligned_cols=144 Identities=29% Similarity=0.379 Sum_probs=112.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ +..||||++... .....+++.+|++++++++|||||+
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36788888888875 567999998643 2445578999999999999999997
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+.......
T Consensus 132 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 211 (458)
T 3rp9_A 132 LYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211 (458)
T ss_dssp EEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred EEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence 467899999999999999999999999999999999999999987642211
Q ss_pred c-------------------------ccccccccCCCcCccccc-CCCccccccceehhhhhhccccC
Q 045449 729 L-------------------------SKQTQTLATIGYMAPEYG-TKGRVSTRGDVCSFGIISGGKET 770 (823)
Q Consensus 729 ~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gvv~~~~~~ 770 (823)
. ...+..+||+.|+|||++ ....|+.++||||+||++|+|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 0 123456789999999976 45679999999999999999998
No 121
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=6.2e-24 Score=220.41 Aligned_cols=193 Identities=22% Similarity=0.263 Sum_probs=162.2
Q ss_pred CCCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCC
Q 045449 37 TSVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSL 116 (823)
Q Consensus 37 ~~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 116 (823)
.+||.|.|++|.. ..+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|.|++..
T Consensus 2 ~~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 2 KTCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp --CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred ccCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 3699999999953 3457899999998 5666665 68999999999999999999999999999999999999999
Q ss_pred chhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccC
Q 045449 117 SSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEI 196 (823)
Q Consensus 117 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~i 196 (823)
+..|.++++|++|+|++|++++..+.. |..+++|++|+|++|++++..+.
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~-------~~~l~~L~~L~L~~N~l~~~~~~----------------------- 125 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGV-------FDHLTQLDKLYLGGNQLKSLPSG----------------------- 125 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTT-------TTTCTTCCEEECCSSCCCCCCTT-----------------------
T ss_pred HhHhccCCcCCEEECCCCcccccChhH-------hcccCCCCEEEcCCCcCCCcChh-----------------------
Confidence 999999999999999999998554443 48899999999999999854332
Q ss_pred CcccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccc
Q 045449 197 PREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGT 268 (823)
Q Consensus 197 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~ 268 (823)
.|..+++|++|+|++|+|++..+..|.++++|++|+|++|.++ .+|...+..+++|++|+|++|.+.+.
T Consensus 126 --~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 126 --VFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp --TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred --HhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 3455667888999999999888878999999999999999998 45544445589999999999999865
No 122
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.6e-24 Score=227.55 Aligned_cols=205 Identities=18% Similarity=0.142 Sum_probs=123.2
Q ss_pred CCCCeEEeecccccccCCCcc--CCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccc
Q 045449 277 SKLSDLELGENLFSGFIPNTI--GNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFS 354 (823)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 354 (823)
++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+... ...+..+++|++|+|++|.++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~-~~~~~~~~~L~~L~Ls~n~l~----------- 158 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLA-ELQQWLKPGLKVLSIAQAHSP----------- 158 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHH-HHHTTBCSCCCEEEEECCSSC-----------
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhH-HHHhhhccCCCEEEeeCCCcc-----------
Confidence 446666666666666666555 556666666666666554322110 012234445555555555544
Q ss_pred cccceEEecCCcceeccCccccCcccccEEEcccCcCCCC--ch--hcccccCCCCEEEccCCCCCCcchH----hhhcC
Q 045449 355 LSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGP--IP--VTFSQLQTLQAFDLTRNKLAGPITD----ELCHL 426 (823)
Q Consensus 355 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p--~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l 426 (823)
+..|..|+.+++|++|||++|++.+. ++ ..+..+++|++|+|++|+++. ++. .+.++
T Consensus 159 --------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 159 --------------AFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp --------------CCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred --------------hhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 44445555556666666666665542 11 223566677777777777752 222 24566
Q ss_pred CCCCEEEcccCcCcccccccccCC---CCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcE
Q 045449 427 ARLHSLVLQGNKFSGSIPSCLGNL---TSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIG 503 (823)
Q Consensus 427 ~~L~~L~Ls~N~l~g~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~ 503 (823)
++|++|||++|++++.+|..+..+ ++|++|+|++|+++. +|..+. ++|+.|||++|++++. |. +..++.|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 777777777777777667666665 577777777777773 555553 6778888888887763 22 466777888
Q ss_pred EEcccCCCCC
Q 045449 504 LDFSRNNLSG 513 (823)
Q Consensus 504 L~ls~N~l~g 513 (823)
|++++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 8888888763
No 123
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.90 E-value=1.5e-24 Score=233.19 Aligned_cols=146 Identities=27% Similarity=0.332 Sum_probs=126.6
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||+|+ |+.||||++..... ...+.+.+|+.++++++||||++
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 5677888888885 66799999976532 23467889999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
+++|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-----~ 160 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----T 160 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----B
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-----c
Confidence 3678999999999999999999999999999999999999999875432 2
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 3467999999999999999999999999999999999999998654
No 124
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.90 E-value=4.9e-25 Score=234.98 Aligned_cols=149 Identities=27% Similarity=0.388 Sum_probs=122.3
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH--------------------------HHHHHHHHHHHHHhh
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE--------------------------RALKSFEDECEVRKR 669 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~ 669 (823)
++|...+.||.|+ +..||||++..... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5788888898885 57799999864321 123578999999999
Q ss_pred cchhhHHH-----------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC
Q 045449 670 IRHRNLVK-----------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE 708 (823)
Q Consensus 670 l~h~niv~-----------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~ 708 (823)
++||||++ ++.|++++|+|+|+.+|+||||||+||+++.
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 172 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE 172 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence 99999998 4678999999999999999999999999999
Q ss_pred CCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCc---cccccceehhhhhhccccCCCCCcCCC
Q 045449 709 DMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGR---VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 709 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||+||++|++++|..||.+.
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 173 DGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp TSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 99999999999987654322 233467999999999987655 478899999999999999999999764
No 125
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.90 E-value=1.5e-25 Score=243.52 Aligned_cols=152 Identities=24% Similarity=0.371 Sum_probs=119.9
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
..++|...+.||.|+ |..||||++.... ....+.+.+|++++++++||||++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357788889999886 6679999986543 333467899999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+|+....... ...
T Consensus 88 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~ 166 (347)
T 3zgw_A 88 EYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YHL 166 (347)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC-ccc
Confidence 367899999999999999999999999999999999999999986543322 123
Q ss_pred cccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..+ +.++||||+||++|++++|..||.+.
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 213 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 45679999999999988775 89999999999999999999999764
No 126
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.90 E-value=6.6e-25 Score=241.28 Aligned_cols=152 Identities=28% Similarity=0.369 Sum_probs=127.2
Q ss_pred ccCCccceeeccC-------------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH---------
Q 045449 628 DRFSENNLIGIGN-------------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK--------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-------------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~--------- 677 (823)
++|...+.||+|+ +..||||+++... ....+++.+|+++++++ +||||++
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 5677778888875 1248999997543 45567899999999999 8999998
Q ss_pred -----------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC
Q 045449 678 -----------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 678 -----------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~ 710 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 240 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCC
Confidence 134788899999999999999999999999999
Q ss_pred cEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 711 VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 711 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.+||+|||+|+...............+|+.|+|||++.+..|+.++|||||||++|++++ |..||.+..
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999987654443333344567899999999999999999999999999999998 899987653
No 127
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.90 E-value=1.3e-24 Score=232.73 Aligned_cols=165 Identities=33% Similarity=0.465 Sum_probs=139.7
Q ss_pred cccccCHHHHHHHhccCCcc------ceeeccC----------CeEEEEEEehHhh----HHHHHHHHHHHHHHhhcchh
Q 045449 614 AIRRFSYHELLRATDRFSEN------NLIGIGN----------GMEVAVKVFHQQY----ERALKSFEDECEVRKRIRHR 673 (823)
Q Consensus 614 ~~~~~~~~~l~~at~~f~~~------~~lg~g~----------~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 673 (823)
....|++.++.+++++|... +.||.|+ +..||||++.... ....+.|.+|++++++++||
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 45789999999999999988 8899986 5679999986422 34457899999999999999
Q ss_pred hHHH-------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC
Q 045449 674 NLVK-------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 674 niv~-------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~ 710 (823)
||++ ++.|++.+|+|+|+.+|+||||||+||+++.++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~ 170 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF 170 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC
Confidence 9998 356888999999999999999999999999999
Q ss_pred cEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 711 VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 711 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.+||+|||+++...............||+.|+|||++.+ .++.++||||+||+++++++|..||....
T Consensus 171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 999999999987654333223344679999999998764 58999999999999999999999987643
No 128
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.7e-24 Score=227.49 Aligned_cols=201 Identities=16% Similarity=0.161 Sum_probs=166.0
Q ss_pred CCCceEEEeecCCCCccCCccc--cccccccceEEecCCcceeccC----ccccCcccccEEEcccCcCCCCchhccccc
Q 045449 329 CKKLKVLIVTGNPLDGILPKSI--GNFSLSLETILMANCSISGNIP----QVVGNLSNLLVLELGGNNLTGPIPVTFSQL 402 (823)
Q Consensus 329 l~~L~~L~Ls~N~l~~~~p~~~--~~~~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 402 (823)
+++|++|++++|.+++..|..+ ..+ .+|++|++++|.+++..+ ..+..+++|++|+|++|++++..|..|..+
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~-~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATG-LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCC-BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhhccC-CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 4568888888888888888777 666 688889999988887655 345679999999999999998888999999
Q ss_pred CCCCEEEccCCCCCCc--ch--HhhhcCCCCCEEEcccCcCcccccc----cccCCCCCCeEeccCCccccccchhhhcc
Q 045449 403 QTLQAFDLTRNKLAGP--IT--DELCHLARLHSLVLQGNKFSGSIPS----CLGNLTSVRVLYLGLNIFTSVLSSTIWNL 474 (823)
Q Consensus 403 ~~L~~L~Ls~N~l~~~--~p--~~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 474 (823)
++|++|+|++|++.+. ++ ..+..+++|++|+|++|+++. +|. .++.+++|++|+|++|++++.+|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999999763 22 224689999999999999973 333 35788999999999999999988888777
Q ss_pred ---CCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCCCcccCccCCCCCCCCCCCcccccCCccc
Q 045449 475 ---KDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIPITIGEGEIPRGGPFANLTAKSFMGNELL 544 (823)
Q Consensus 475 ---~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~g~ip~~~~~~~~~~~~~~~n~~~ 544 (823)
++|++|+|++|.++ .+|..+. +.|+.|||++|++++. |....+..+..+.+.+|+..
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~----------~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA----------PQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC----------CCTTSCCCCSCEECSSTTTS
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC----------chhhhCCCccEEECcCCCCC
Confidence 69999999999999 7787774 8999999999999952 22234567778889999764
No 129
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.90 E-value=3.8e-25 Score=235.38 Aligned_cols=151 Identities=28% Similarity=0.470 Sum_probs=122.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehH---hhHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQ---QYERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++.. ......+.|.+|+.++++++||||++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 5677788888875 56799998843 22455678999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 169 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQT 169 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc-ccc
Confidence 357889999999999999999999999999999999999999987643322 223
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
....||+.|+|||++.+..++.++||||+||++|++++|..||.+..
T Consensus 170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 34579999999999999999999999999999999999999997643
No 130
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.90 E-value=5.2e-25 Score=243.01 Aligned_cols=149 Identities=22% Similarity=0.225 Sum_probs=126.4
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhc-chhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRI-RHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~------------- 677 (823)
.++|...+.||+|+ ++.||||+++... ....+.+.+|..++.++ +|||||+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 36788889999986 5679999997653 33345688999999887 8999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+...... .
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--~ 208 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 208 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--C
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC--C
Confidence 46789999999999999999999999999999999999999998633222 1
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
.....+||+.|+|||++.+..|+.++||||+||++|+|++|..||..
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 23457899999999999999999999999999999999999999953
No 131
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.90 E-value=7.2e-25 Score=234.68 Aligned_cols=152 Identities=27% Similarity=0.391 Sum_probs=121.8
Q ss_pred ccCCccceeeccC---------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 628 DRFSENNLIGIGN---------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
++|...+.||.|+ ...||||+++.. .....+.|.+|++++++++||||++
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~ 115 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEG 115 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSS
T ss_pred cceEEEeEecCCCCeEEEEEEECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEecCCC
Confidence 5777888999987 234788887642 2445578999999999999999998
Q ss_pred ---------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccccc
Q 045449 678 ---------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTL 736 (823)
Q Consensus 678 ---------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 736 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+|+...............
T Consensus 116 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~ 195 (307)
T 3lb7_A 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT 195 (307)
T ss_dssp CBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------CC
T ss_pred CcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCC
Confidence 35788999999999999999999999999999999999999998654322222334567
Q ss_pred cCCCcCcccccC---CCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 737 ATIGYMAPEYGT---KGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 737 gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
||+.|+|||++. +..++.++|||||||+++++++|..||....
T Consensus 196 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~ 241 (307)
T 3lb7_A 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp CCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC
Confidence 999999999875 5678999999999999999999999997643
No 132
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.90 E-value=3.2e-25 Score=239.16 Aligned_cols=152 Identities=26% Similarity=0.371 Sum_probs=125.4
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||+|+ ++.||||++.... ....+.+.+|+.++++++||||++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 35788888899886 5679999986433 333467899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++............
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 165 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccC
Confidence 46789999999999999999999999999999999999999998764333323334
Q ss_pred ccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..+||+.|+|||++.+..+ +.++||||+||++|++++|..||...
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 211 (323)
T 3tki_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (323)
T ss_dssp SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 5689999999999887775 78899999999999999999999754
No 133
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.90 E-value=2.7e-25 Score=240.35 Aligned_cols=152 Identities=24% Similarity=0.312 Sum_probs=121.5
Q ss_pred ccCCccceeeccC------------C----eEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 628 DRFSENNLIGIGN------------G----MEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
++|...+.||.|+ + ..||+|.+.... ....++|.+|++++++++||||++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v 94 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 5677788888886 1 236888886443 344578999999999999999997
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+.........
T Consensus 95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 174 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence 35788999999999999999999999999999999999999999875544433
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
......||+.|+|||++.+..++.++|||||||++|++++ |..||....
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 224 (327)
T 3poz_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC
Confidence 3344567889999999999999999999999999999999 999997653
No 134
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.90 E-value=1.4e-24 Score=236.20 Aligned_cols=148 Identities=23% Similarity=0.231 Sum_probs=127.2
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhc-chhhHHH--------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRI-RHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~-------------- 677 (823)
++|...+.||+|+ ++.||||++.... ....+.+.+|+.++.++ +||||++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5678888899886 6779999997543 44557789999999988 8999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+....... .
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~--~ 166 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--T 166 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC--C
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC--c
Confidence 467899999999999999999999999999999999999999986432221 2
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
....+||+.|+|||++.+..|+.++||||+||++|++++|..||..
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 3456899999999999999999999999999999999999999964
No 135
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.89 E-value=1.2e-24 Score=241.25 Aligned_cols=153 Identities=24% Similarity=0.320 Sum_probs=120.9
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcc-hhhHHH-------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIR-HRNLVK------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~------------- 677 (823)
..++|...+.||.|+ |..||||++... .....+++.+|+.++.++. ||||++
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 456788888888875 677999998543 2445577889999999997 999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC---
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED--- 727 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~--- 727 (823)
++.|++.+|+|+|+.||+||||||+|||++.++.+||+|||+|+......
T Consensus 87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 166 (388)
T 3oz6_A 87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166 (388)
T ss_dssp EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence 35789999999999999999999999999999999999999998753211
Q ss_pred ----------------ccccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 728 ----------------QLSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 728 ----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+..+||+.|+|||++.+ ..|+.++||||+||+++++++|..||.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0112344689999999999876 67899999999999999999999999664
No 136
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.89 E-value=8.6e-25 Score=237.45 Aligned_cols=152 Identities=25% Similarity=0.256 Sum_probs=128.4
Q ss_pred HHhccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhc-chhhHHH-----------
Q 045449 625 RATDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRI-RHRNLVK----------- 677 (823)
Q Consensus 625 ~at~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~----------- 677 (823)
...++|...+.||+|+ ++.||||+++... ....+.+..|.+++.++ +||||++
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3457899999999986 6679999997653 22346788899999887 9999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+.......
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 173 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC
Confidence 467899999999999999999999999999999999999999986432221
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||++|++++|..||.+.
T Consensus 174 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 174 --KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 234568999999999999999999999999999999999999999654
No 137
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.6e-24 Score=235.23 Aligned_cols=253 Identities=13% Similarity=0.146 Sum_probs=167.0
Q ss_pred CCcEEEccCCcccccCCcccccCC--CCccEEEeeccccccccCccccCCCCCCeEEeeccccccc-CCCccCCCcccCc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSL--PNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGF-IPNTIGNLRNLEF 305 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~ 305 (823)
.++.+++++|.+. |..+.. + ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~-~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGR-LLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHH-HHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHh-hhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3677788777765 222222 3 5677777777777665544 44566677777776666544 4555555555555
Q ss_pred ccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCC-cceec-cCccccCcccccE
Q 045449 306 GNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANC-SISGN-IPQVVGNLSNLLV 383 (823)
Q Consensus 306 L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~ 383 (823)
|+|++|.+ ++..|..+..+ ++|++|++++| .+++. ++..+.++++|++
T Consensus 123 L~L~~~~l-----------------------------~~~~~~~l~~~-~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 123 LSLEGLRL-----------------------------SDPIVNTLAKN-SNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp EECTTCBC-----------------------------CHHHHHHHTTC-TTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred EeCcCccc-----------------------------CHHHHHHHhcC-CCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 55555544 44444444444 45555555555 45442 4555667778888
Q ss_pred EEcccC-cCCCC-chhcccccC-CCCEEEccCC--CCC-CcchHhhhcCCCCCEEEcccCc-CcccccccccCCCCCCeE
Q 045449 384 LELGGN-NLTGP-IPVTFSQLQ-TLQAFDLTRN--KLA-GPITDELCHLARLHSLVLQGNK-FSGSIPSCLGNLTSVRVL 456 (823)
Q Consensus 384 L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L 456 (823)
|++++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+..+++|+.|+|++|. +++..+..+..+++|+.|
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L 252 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 252 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEe
Confidence 888888 77754 566677788 8888888888 555 4567777788888888888888 777777788888888888
Q ss_pred eccCCc-cccccchhhhccCCCcEEeccccccccccCccccCC-CCCcEEEcccCCCCCCCCCccc
Q 045449 457 YLGLNI-FTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNL-KVVIGLDFSRNNLSGDIPITIG 520 (823)
Q Consensus 457 ~Ls~N~-l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l-~~L~~L~ls~N~l~g~ip~~~~ 520 (823)
++++|. ++......+..+++|+.|++++| ++. ..+..+ ..+..|++++|+++|.+|..++
T Consensus 253 ~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 253 SLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred eCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 888884 33332336778888999999988 332 233333 2366677899999988777664
No 138
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.89 E-value=1e-24 Score=244.87 Aligned_cols=151 Identities=26% Similarity=0.373 Sum_probs=128.1
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
..++|...+.||.|+ |..||+|++.... ....+.+.+|++++++++||||++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 356788889999886 5679999986432 344578999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC---CCCcEEEeecccccccCCCCc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD---EDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~---~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++++|+|+|+.+|+||||||+|||++ .++.+||+|||+|+.......
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 467899999999999999999999999998 467899999999987654322
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||++|++++|..||.+.
T Consensus 169 --~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~ 216 (444)
T 3soa_A 169 --AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE 216 (444)
T ss_dssp --BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred --eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc
Confidence 234567999999999999989999999999999999999999998654
No 139
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.89 E-value=6.7e-25 Score=239.02 Aligned_cols=146 Identities=23% Similarity=0.313 Sum_probs=127.1
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ |..||||++..... ...+.+.+|++++++++||||++
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 5788888888885 56799999975532 23467899999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++..... .
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-----~ 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----T 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----B
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-----c
Confidence 4678999999999999999999999999999999999999999876432 2
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..++.++||||+||++|++++|..||...
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 241 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC
Confidence 3467999999999999999999999999999999999999999764
No 140
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.89 E-value=8.7e-25 Score=239.50 Aligned_cols=150 Identities=27% Similarity=0.427 Sum_probs=128.0
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
..++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 456788889999886 6679999996442 345578999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC---CcEEEeecccccccCCCCc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED---MVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~---~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++++|+|+|+.+|+||||||+||+++.+ +.+||+|||+++.......
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 36789999999999999999999999999864 4699999999987653322
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|+|||++.+..|+.++||||+||++|++++|..||.+.
T Consensus 187 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 233 (362)
T 2bdw_A 187 ---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233 (362)
T ss_dssp ---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 23467999999999999989999999999999999999999998664
No 141
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.89 E-value=9.7e-25 Score=239.80 Aligned_cols=149 Identities=17% Similarity=0.128 Sum_probs=123.7
Q ss_pred HhccCCccceeeccC-----------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc---hhhHHH--------
Q 045449 626 ATDRFSENNLIGIGN-----------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR---HRNLVK-------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~-------- 677 (823)
..++|...+.||+|+ +..||||++..... .++.+|++++.+++ |+||++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 346788888888876 34589999876543 46777888888776 899887
Q ss_pred -------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC-----------C
Q 045449 678 -------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE-----------D 709 (823)
Q Consensus 678 -------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~-----------~ 709 (823)
++.|++.+|+|+|+.+|+||||||+|||++. +
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence 3578899999999999999999999999998 8
Q ss_pred CcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 710 MVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 710 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
+.+||+|||+|+.+............+||+.|+|||++.+..|+.++|||||||++|++++|+.||..
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 99999999999765433222334567899999999999999999999999999999999999999854
No 142
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.89 E-value=9.7e-25 Score=238.30 Aligned_cols=151 Identities=25% Similarity=0.325 Sum_probs=127.1
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHH-----HHHHHHHHHHHHhhcchhhHHH------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYER-----ALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
.++|...+.||+|+ ++.||||++...... ..+.+.+|++++++++||||++
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35688888999886 677999999654321 2467999999999999999998
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC---cEEEeecccccc
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM---VAHISDFGIAKL 722 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~---~~kl~DfGla~~ 722 (823)
++.|++++|+|+|+.+|+||||||+||+++.++ .+||+|||+++.
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 356889999999999999999999999998654 499999999987
Q ss_pred cCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 723 LSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 723 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
...... .....+||+.|+|||++.+..|+.++||||+||++|++++|..||.+..
T Consensus 183 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (351)
T 3c0i_A 183 LGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK 237 (351)
T ss_dssp CCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH
T ss_pred ecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH
Confidence 654322 2334679999999999999999999999999999999999999997653
No 143
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.89 E-value=5.7e-25 Score=239.44 Aligned_cols=152 Identities=25% Similarity=0.369 Sum_probs=119.6
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcch--hhHHH---------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRH--RNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++... .....+.|.+|++++.+++| +||++
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4677778888876 566999998643 34556789999999999977 89987
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+|||++ ++.+||+|||+++............
T Consensus 89 e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 89 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp CCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence 467899999999999999999999999997 5789999999998765443332334
Q ss_pred ccccCCCcCcccccCC-----------CccccccceehhhhhhccccCCCCCcCCCcc
Q 045449 734 QTLATIGYMAPEYGTK-----------GRVSTRGDVCSFGIISGGKETRSMTVGETCT 780 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~~ 780 (823)
..+||+.|+|||++.+ ..++.++|||||||+++++++|..||.+...
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 225 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh
Confidence 5679999999999854 6789999999999999999999999977543
No 144
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.89 E-value=1.6e-24 Score=233.65 Aligned_cols=151 Identities=25% Similarity=0.287 Sum_probs=126.2
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
.++|...+.||.|+ +..||||++..... ....+.+|+.++++++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 36788888999886 56799999976543 3356677999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCC----------CEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSI----------PIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~----------~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
++.|++.+|+|+|+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 102 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~ 181 (322)
T 3soc_A 102 AFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181 (322)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence 356788888889988 9999999999999999999999999999877
Q ss_pred CCCCccccccccccCCCcCcccccCC-----CccccccceehhhhhhccccCCCCCcCCC
Q 045449 724 SGEDQLSKQTQTLATIGYMAPEYGTK-----GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 724 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.............||+.|+|||++.+ ..++.++|||||||++|++++|..||.+.
T Consensus 182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241 (322)
T ss_dssp CTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred ccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 65444333445679999999999876 45778899999999999999999998764
No 145
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.89 E-value=7.1e-25 Score=238.90 Aligned_cols=150 Identities=23% Similarity=0.178 Sum_probs=127.8
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhc-chhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRI-RHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~------------- 677 (823)
.++|...+.||+|+ ++.||||++..... ...+.+..|.+++.++ +||+|++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 46788889999986 45699999976532 2346788999999988 8999997
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+++|++.+|+|+|+.||+||||||+|||++.++++||+|||+|+.......
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-- 176 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-- 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc--
Confidence 467899999999999999999999999999999999999999986432221
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.
T Consensus 177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 234568999999999999999999999999999999999999999764
No 146
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.89 E-value=2.3e-24 Score=229.08 Aligned_cols=147 Identities=25% Similarity=0.311 Sum_probs=123.5
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ ++.||||++.... ....+.+.+|++++++++||||++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4677778888875 5679999986432 334467889999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 159 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RCYS 159 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--SCCC
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--cccc
Confidence 36789999999999999999999999999999999999999998764322 2234
Q ss_pred ccccCCCcCcccccCCCc-cccccceehhhhhhccccCCCCCcC
Q 045449 734 QTLATIGYMAPEYGTKGR-VSTRGDVCSFGIISGGKETRSMTVG 776 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvv~~~~~~~~~~~~ 776 (823)
...||+.|+|||++.+.. ++.++||||+||++++++++..|+.
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 467899999999987766 7999999999999999999888853
No 147
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.89 E-value=1.4e-24 Score=248.02 Aligned_cols=149 Identities=26% Similarity=0.291 Sum_probs=128.5
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||+|+ |+.||||++..... ...+.+.+|++++++++||||++
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5677778899886 67799999976542 23467899999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 367899999999999999999999999999999999999999987654322
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||++|+|++|..||...
T Consensus 345 --~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 345 --KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp --CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred --ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 223458999999999999999999999999999999999999999764
No 148
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.89 E-value=2.4e-24 Score=231.13 Aligned_cols=150 Identities=26% Similarity=0.332 Sum_probs=124.2
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788888899886 5679999987543 223467899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~ 177 (311)
T 3niz_A 100 FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYT 177 (311)
T ss_dssp CCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----
T ss_pred CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc--ccc
Confidence 367899999999999999999999999999999999999999987643222 234
Q ss_pred ccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 223 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence 4578999999999876 56899999999999999999999999764
No 149
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=7.9e-25 Score=240.03 Aligned_cols=161 Identities=27% Similarity=0.346 Sum_probs=136.7
Q ss_pred cccccccCHHHHHHHhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc-----hhh
Q 045449 612 PQAIRRFSYHELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR-----HRN 674 (823)
Q Consensus 612 ~~~~~~~~~~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~n 674 (823)
......+++.+.....++|...+.||.|+ +..||||++... ....+.+..|+++++++. |||
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence 34566777777777889999999999986 567999999743 334467888999999996 999
Q ss_pred HHH-----------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC-----
Q 045449 675 LVK-----------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE----- 708 (823)
Q Consensus 675 iv~-----------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~----- 708 (823)
|++ ++.|++.+|+|+|+.+|+||||||+|||++.
T Consensus 98 iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 98 IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp BCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCE
T ss_pred eecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccc
Confidence 998 3678999999999999999999999999975
Q ss_pred --------------------CCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccc
Q 045449 709 --------------------DMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGK 768 (823)
Q Consensus 709 --------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~ 768 (823)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++||||+||++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 789999999999865432 2345799999999999999999999999999999999
Q ss_pred cCCCCCcCCC
Q 045449 769 ETRSMTVGET 778 (823)
Q Consensus 769 ~~~~~~~~~~ 778 (823)
++|..||...
T Consensus 253 l~g~~pf~~~ 262 (360)
T 3llt_A 253 YTGSLLFRTH 262 (360)
T ss_dssp HHSSCSCCCS
T ss_pred HHCCCCCCCC
Confidence 9999999654
No 150
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.2e-22 Score=210.74 Aligned_cols=182 Identities=21% Similarity=0.245 Sum_probs=153.2
Q ss_pred CceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEc
Q 045449 331 KLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDL 410 (823)
Q Consensus 331 ~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 410 (823)
..+.++++++.++. +|..+. .++++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCccc-cCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45667777777773 455443 57888888888888888888888899999999999998888888888899999999
Q ss_pred cCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccc
Q 045449 411 TRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGP 490 (823)
Q Consensus 411 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 490 (823)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|||++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999888778888889999999999999877777788889999999999999988777888899999999999999988
Q ss_pred cCccccCCCCCcEEEcccCCCCCCCC
Q 045449 491 LSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 491 ~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
.+..+..++.|+.|++++|++++..+
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 78788889999999999999987633
No 151
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.89 E-value=1.2e-24 Score=235.03 Aligned_cols=152 Identities=24% Similarity=0.392 Sum_probs=123.3
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
++|...+.||.|+ +..||||++... .....+.|.+|++++++++||||++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 4566678899886 234999999754 3455678999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL- 729 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CC
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccce
Confidence 3578889999999999999999999999999999999999999876543221
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.......+|+.|+|||++.+..++.++|||||||++|++++ |..||.+..
T Consensus 209 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 259 (325)
T 3kul_A 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259 (325)
T ss_dssp EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 12233456788999999988899999999999999999998 999986653
No 152
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.2e-23 Score=212.45 Aligned_cols=86 Identities=19% Similarity=0.207 Sum_probs=46.8
Q ss_pred CCccEEEeeccccccccCccccCCCCCCeEEeeccc-ccccCCCccCCCcccCcccccC-ccccCCCCcccccccccCCC
Q 045449 253 PNVETLNLGINSFSGTIPSSITNSSKLSDLELGENL-FSGFIPNTIGNLRNLEFGNIAD-NYLTSSTPELSFLSSLTNCK 330 (823)
Q Consensus 253 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~l~~l~ 330 (823)
++|++|+|++|++++..+..|.++++|++|++++|+ ++++.+..|..+++|++|++++ |.++... +..|.+++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~-----~~~f~~l~ 105 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID-----PDALKELP 105 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC-----TTSEECCT
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC-----HHHhCCCC
Confidence 366666666666665555566666666666666665 6555555555555555555554 5544431 12344444
Q ss_pred CceEEEeecCCCC
Q 045449 331 KLKVLIVTGNPLD 343 (823)
Q Consensus 331 ~L~~L~Ls~N~l~ 343 (823)
+|+.|++++|.++
T Consensus 106 ~L~~L~l~~n~l~ 118 (239)
T 2xwt_C 106 LLKFLGIFNTGLK 118 (239)
T ss_dssp TCCEEEEEEECCC
T ss_pred CCCEEeCCCCCCc
Confidence 4444444444444
No 153
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.9e-23 Score=211.97 Aligned_cols=87 Identities=22% Similarity=0.329 Sum_probs=56.0
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccc-cccccCccccCCCCCCeEEeec-ccccccCCCccCCCcccCcc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINS-FSGTIPSSITNSSKLSDLELGE-NLFSGFIPNTIGNLRNLEFG 306 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 306 (823)
+|++|++++|+++ .+|...+..+++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|..+++|++|
T Consensus 32 ~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 6667777777766 3444333346667777777775 6655555666666777777776 66666666666666777777
Q ss_pred cccCccccCC
Q 045449 307 NIADNYLTSS 316 (823)
Q Consensus 307 ~L~~N~l~~~ 316 (823)
++++|.+++.
T Consensus 111 ~l~~n~l~~l 120 (239)
T 2xwt_C 111 GIFNTGLKMF 120 (239)
T ss_dssp EEEEECCCSC
T ss_pred eCCCCCCccc
Confidence 7777766653
No 154
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.89 E-value=1.2e-24 Score=237.04 Aligned_cols=145 Identities=28% Similarity=0.379 Sum_probs=123.6
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHh---hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQ---YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++... .....++|.+|++++++++||||++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4577778888876 667999998632 2445578999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~------ 207 (348)
T 1u5q_A 134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------ 207 (348)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB------
T ss_pred ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC------
Confidence 3568899999999999999999999999999999999999999875422
Q ss_pred cccccCCCcCcccccC---CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGT---KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++. .+.++.++|||||||+++++++|..||...
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 256 (348)
T 1u5q_A 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 256 (348)
T ss_dssp CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2357999999999874 567899999999999999999999998654
No 155
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.89 E-value=5.7e-25 Score=242.61 Aligned_cols=153 Identities=26% Similarity=0.321 Sum_probs=126.2
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ +..||||+++... ....++|.+|++++++++||||++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 35677778888885 5679999987543 344568999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++++|+|+|+.+|+||||||+|||++.++.+||+|||+++...........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 3578889999999999999999999999999999999999999875433221111
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
....+++.|+|||++.++.++.++|||||||++|++++ |..||....
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 22345778999999988899999999999999999998 899987654
No 156
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.89 E-value=1.2e-24 Score=240.83 Aligned_cols=151 Identities=25% Similarity=0.363 Sum_probs=121.2
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcc--hhhHHH---------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIR--HRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++... .....+.|.+|++++.+++ ||||++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588888999886 566999998643 2455678999999999996 499987
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+|||++ ++.+||+|||+++............
T Consensus 136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence 367899999999999999999999999996 5789999999998765433322334
Q ss_pred ccccCCCcCcccccCC-----------CccccccceehhhhhhccccCCCCCcCCCc
Q 045449 734 QTLATIGYMAPEYGTK-----------GRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
..+||+.|+|||++.+ ..|+.++|||||||++|++++|..||.+..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 271 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence 5679999999999864 468999999999999999999999997653
No 157
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.89 E-value=1.7e-24 Score=236.75 Aligned_cols=149 Identities=23% Similarity=0.373 Sum_probs=127.1
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHH------HHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYER------ALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
.++|...+.||.|+ |..||||++...... ..+.+.+|++++++++||||++
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 46788888999886 667999998654311 2467999999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC----cEEEeecccccccC
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM----VAHISDFGIAKLLS 724 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~----~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.||+||||||+||+++.++ .+||+|||+++...
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 467899999999999999999999999998776 79999999998765
Q ss_pred CCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.... ....+||+.|+|||++.+..|+.++||||+||++|++++|..||.+.
T Consensus 171 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~ 221 (361)
T 2yab_A 171 DGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (361)
T ss_dssp TTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 4322 34467999999999999889999999999999999999999999654
No 158
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.89 E-value=2e-24 Score=247.31 Aligned_cols=149 Identities=23% Similarity=0.291 Sum_probs=128.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||+|+ |..||||++..... ...+.+.+|++++++++|||||+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 35688888899886 66799999975432 23457889999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+.......
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~- 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc-
Confidence 367899999999999999999999999999999999999999987654322
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|+|||++.+..|+.++||||+||++|+|++|..||...
T Consensus 342 --~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 342 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp --EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred --ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 23458999999999999989999999999999999999999999764
No 159
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.89 E-value=6.2e-25 Score=235.74 Aligned_cols=153 Identities=26% Similarity=0.461 Sum_probs=121.9
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh---hHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ---YERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||.|+ ++.||||++... .....+.|.+|++++++++||||++
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36788888899886 677999999754 2455578999999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 36788999999999999999999999999999999999999998764332
Q ss_pred c-cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 728 Q-LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 728 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
. ........||+.|+|||++.+..++.++||||+||++|++++|..||.+..
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 122334579999999999999899999999999999999999999997643
No 160
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.89 E-value=3.9e-24 Score=240.28 Aligned_cols=150 Identities=27% Similarity=0.340 Sum_probs=121.7
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ +..||||++... .....+++.+|++++++++||||++
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46888889999886 567999999643 2445578999999999999999997
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+.......
T Consensus 105 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 184 (432)
T 3n9x_A 105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184 (432)
T ss_dssp EEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----
T ss_pred EEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccc
Confidence 467999999999999999999999999999999999999999997643321
Q ss_pred c--------------------ccccccccCCCcCccccc-CCCccccccceehhhhhhccccCCCCCcC
Q 045449 729 L--------------------SKQTQTLATIGYMAPEYG-TKGRVSTRGDVCSFGIISGGKETRSMTVG 776 (823)
Q Consensus 729 ~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~ 776 (823)
. ...+..+||+.|+|||++ ....|+.++||||+||++|++++|..|+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 1 123557899999999985 55669999999999999999998655553
No 161
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.89 E-value=2.8e-24 Score=237.04 Aligned_cols=149 Identities=22% Similarity=0.330 Sum_probs=128.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||+|++..........+.+|++++++++||||++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46788888999886 5679999997665555578999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC--CCcEEEeecccccccCCCCcccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE--DMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+|||++. ++.+||+|||+|+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--- 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--- 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC---
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc---
Confidence 4678999999999999999999999999974 57899999999987654322
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 23457999999999999999999999999999999999999999764
No 162
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=2.2e-24 Score=232.36 Aligned_cols=148 Identities=23% Similarity=0.275 Sum_probs=127.1
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||+|++.... ...+.+.+|++++++++||||++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46788888899886 5679999986543 33467899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC--CCcEEEeecccccccCCCCcccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE--DMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~--- 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--- 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE---
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc---
Confidence 4678999999999999999999999999986 78999999999987654332
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 206 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC
Confidence 23457999999999999888999999999999999999999999664
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.89 E-value=1.1e-24 Score=238.98 Aligned_cols=150 Identities=26% Similarity=0.279 Sum_probs=118.4
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHH-HhhcchhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEV-RKRIRHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~------------- 677 (823)
.++|...+.||+|+ +..||||++.... ....+.+.+|..+ ++.++||||++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 35788888999886 5669999997553 3344567778877 57789999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++++||+|||+++.......
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~-- 194 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-- 194 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC--
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCC--
Confidence 467899999999999999999999999999999999999999986433221
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||++|+|++|..||.+.
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 234568999999999999999999999999999999999999999654
No 164
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.89 E-value=2.7e-24 Score=236.44 Aligned_cols=144 Identities=24% Similarity=0.357 Sum_probs=121.8
Q ss_pred cceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------------
Q 045449 633 NNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------------- 677 (823)
Q Consensus 633 ~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------------- 677 (823)
.+.||.|+ |..||||++........+.|.+|++++++++||||++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 45677764 6679999998765556678999999999999999998
Q ss_pred ------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe--CCCCcEEEeecccccccCCCCcccccccccc
Q 045449 678 ------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL--DEDMVAHISDFGIAKLLSGEDQLSKQTQTLA 737 (823)
Q Consensus 678 ------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl--~~~~~~kl~DfGla~~~~~~~~~~~~~~~~g 737 (823)
++.|++.+|+|+|+.+|+||||||+|||+ +.++.+||+|||+++....... ....+|
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~g 250 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFG 250 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCCCCS
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cccccC
Confidence 35789999999999999999999999999 5678999999999987654332 234579
Q ss_pred CCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 738 TIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 738 t~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
|+.|+|||++.+..++.++|||||||+++++++|..||.+..
T Consensus 251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 292 (373)
T 2x4f_A 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292 (373)
T ss_dssp SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999998899999999999999999999999997643
No 165
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.88 E-value=1.2e-24 Score=238.37 Aligned_cols=163 Identities=23% Similarity=0.288 Sum_probs=134.3
Q ss_pred ccCHHHHHHHhccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH
Q 045449 617 RFSYHELLRATDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK 677 (823)
Q Consensus 617 ~~~~~~l~~at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~ 677 (823)
.+...+..-..++|...+.||.|+ ++.||||++.... ....+.|.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345556666678999999999986 2569999997543 44557899999999999 8899998
Q ss_pred H-------------------------------------------------------------------------------
Q 045449 678 I------------------------------------------------------------------------------- 678 (823)
Q Consensus 678 ~------------------------------------------------------------------------------- 678 (823)
+
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 1
Q ss_pred ----------------------------HHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 679 ----------------------------ISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 679 ----------------------------~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 1377889999999999999999999999999999999999998765443333
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
......||+.|+|||++.+..++.++|||||||++|++++ |..||.+..
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 3445678999999999988899999999999999999998 999997643
No 166
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.88 E-value=2.7e-24 Score=232.44 Aligned_cols=149 Identities=23% Similarity=0.291 Sum_probs=116.0
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhh----HHHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQY----ERALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
++|...+.||.|+ +..||||+++... ......+.+|++++++++||||++
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5677778888775 5669999987542 234467889999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
+++|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 176 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--------
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCc
Confidence 367899999999999999999999999999999999999999986433221
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..++.++||||+||++|++++|..||...
T Consensus 177 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 177 --VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred --cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 233467999999999999989999999999999999999999999764
No 167
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.88 E-value=5.4e-24 Score=240.52 Aligned_cols=148 Identities=27% Similarity=0.433 Sum_probs=126.5
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ |+.||||++..... ...+.+.+|++++++++||||++
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5677778888875 67799999976532 23467999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~---~ 172 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---L 172 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC---B
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc---c
Confidence 467999999999999999999999999999999999999999987654322 2
Q ss_pred cccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..+ +.++||||+||++|++++|..||.+.
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 219 (476)
T 2y94_A 173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219 (476)
T ss_dssp CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC
Confidence 34679999999999988776 78999999999999999999999764
No 168
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.88 E-value=4.5e-24 Score=236.62 Aligned_cols=152 Identities=19% Similarity=0.288 Sum_probs=126.7
Q ss_pred hccCCccceeecc--C------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 627 TDRFSENNLIGIG--N------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g--~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
.++|...+.||.| + +..||||++.... ....+.+.+|++++++++|||||+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678888899988 4 6679999997553 455678999999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||.+........
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 356889999999999999999999999999999999999999875432111
Q ss_pred -----cccccccccCCCcCcccccCC--CccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 -----LSKQTQTLATIGYMAPEYGTK--GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 -----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.......+||+.|+|||++.+ ..|+.++||||+||++|++++|..||.+.
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 111223478999999999887 57999999999999999999999999763
No 169
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.88 E-value=1e-24 Score=239.62 Aligned_cols=152 Identities=23% Similarity=0.284 Sum_probs=123.6
Q ss_pred ccCCccceeeccC-----------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 628 DRFSENNLIGIGN-----------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
++|...+.||.|+ +..||||++... ......+|.+|+.++++++||||++
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 4566667777775 346999998643 2445568999999999999999998
Q ss_pred -----------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC---cEEEeeccc
Q 045449 678 -----------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM---VAHISDFGI 719 (823)
Q Consensus 678 -----------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~---~~kl~DfGl 719 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++ .+||+|||+
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 356888999999999999999999999999554 599999999
Q ss_pred ccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 720 AKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 720 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
|+...............||+.|+|||++.+..++.++|||||||+++++++ |..||....
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~ 291 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 986543322223344578999999999988899999999999999999998 889987643
No 170
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.88 E-value=2.3e-24 Score=228.63 Aligned_cols=152 Identities=30% Similarity=0.397 Sum_probs=117.4
Q ss_pred hccCCccceeeccC---------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN---------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~---------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||.|+ ...||||++.... ....+.|.+|++++++++||||++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~ 102 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCE 102 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCC
T ss_pred ccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecC
Confidence 35788889999987 3348999986432 455678999999999999999997
Q ss_pred ----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccccc
Q 045449 678 ----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQT 735 (823)
Q Consensus 678 ----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 735 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++..............
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 182 (289)
T 3og7_A 103 GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182 (289)
T ss_dssp EEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------
T ss_pred CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccccccc
Confidence 3578899999999999999999999999999999999999999865433222233446
Q ss_pred ccCCCcCcccccC---CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 736 LATIGYMAPEYGT---KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 736 ~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.||+.|+|||++. +..++.++||||+||+++++++|..||...
T Consensus 183 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 228 (289)
T 3og7_A 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228 (289)
T ss_dssp -CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred CCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc
Confidence 7999999999886 566889999999999999999999999764
No 171
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.88 E-value=1.1e-24 Score=246.04 Aligned_cols=150 Identities=23% Similarity=0.269 Sum_probs=118.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||.|+ |..||||++.... ......+.+|++++++++||||++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46788889999986 5679999997653 334467889999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCC-CCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 --------------------------IISSSLEYLHFGHS-IPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~-~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+ .+|+||||||+|||++.++.+||+|||+|+.......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-- 304 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-- 304 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--
Confidence 35788999999998 9999999999999999999999999999986433222
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++||||+||+++++++|..||...
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 234568999999999999999999999999999999999999999664
No 172
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.88 E-value=2.3e-24 Score=232.58 Aligned_cols=154 Identities=21% Similarity=0.331 Sum_probs=115.8
Q ss_pred HhccCCccceeeccC------------C---eEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 626 ATDRFSENNLIGIGN------------G---MEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~---~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
..++|...+.||.|+ + ..||||++.... ....++|.+|++++++++||||++
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 356788889999886 1 268999997542 344678999999999999999987
Q ss_pred -----------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEee
Q 045449 678 -----------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISD 716 (823)
Q Consensus 678 -----------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~D 716 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEee
Confidence 356888999999999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 717 FGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 717 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
||+|+...............+|+.|+|||++.+..++.++||||+||+++++++ |..||.+..
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 999987654443333344567889999999998899999999999999999999 888887643
No 173
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.88 E-value=2e-24 Score=233.35 Aligned_cols=149 Identities=24% Similarity=0.372 Sum_probs=126.4
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH------HHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE------RALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35677888899886 66799999864321 13467999999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC----cEEEeecccccccC
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM----VAHISDFGIAKLLS 724 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~----~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 467899999999999999999999999998877 89999999998765
Q ss_pred CCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.... .....||+.|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus 170 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 170 FGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp TTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 3322 23457999999999999889999999999999999999999999654
No 174
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.88 E-value=6.4e-25 Score=237.75 Aligned_cols=149 Identities=22% Similarity=0.227 Sum_probs=124.5
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++..... .+.+.+|+++++++ +||||++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5677777788775 67799999865432 24688999999999 9999997
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc-----EEEeecccccccCCCCcc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV-----AHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~-----~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++. +||+|||+|+........
T Consensus 87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~ 166 (330)
T 2izr_A 87 LGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK 166 (330)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC
T ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC
Confidence 4678999999999999999999999999998887 999999999876443221
Q ss_pred c-----cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 S-----KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. ......||+.|+|||++.+..++.++|||||||++|++++|..||.+.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~ 220 (330)
T 2izr_A 167 KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL 220 (330)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence 1 124567999999999999999999999999999999999999999764
No 175
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.8e-22 Score=215.91 Aligned_cols=212 Identities=21% Similarity=0.375 Sum_probs=130.0
Q ss_pred chhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEE
Q 045449 204 PYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLE 283 (823)
Q Consensus 204 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 283 (823)
..+..+.+..+.++..+ .+.++++|++|++++|.++ .+| .+. .+++|++|+|++|++++..+ +..+++|++|+
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~-~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQ-YLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGG-GCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhh-ccCCCCEEEccCCcCCCChh--HccCCCCCEEE
Confidence 34455566666666543 3456778888888888887 565 333 37888888888888875444 77888888888
Q ss_pred eecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEec
Q 045449 284 LGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMA 363 (823)
Q Consensus 284 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~ 363 (823)
|++|++++. +.+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+ ++|++|+++
T Consensus 92 L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-------~~l~~l~~L~~L~l~~n~l~~~~~--l~~l-~~L~~L~l~ 159 (308)
T 1h6u_A 92 LSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-------TPLAGLSNLQVLYLDLNQITNISP--LAGL-TNLQYLSIG 159 (308)
T ss_dssp CCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-------GGGTTCTTCCEEECCSSCCCCCGG--GGGC-TTCCEEECC
T ss_pred ccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-------hhhcCCCCCCEEECCCCccCcCcc--ccCC-CCccEEEcc
Confidence 888888764 3577777777777777777764 136666777777777776665432 4444 455555555
Q ss_pred CCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCc
Q 045449 364 NCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFS 440 (823)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 440 (823)
+|++++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|.++
T Consensus 160 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 160 NAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred CCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 555554322 4555555555555555553322 4455555555555555554332 445555555555555554
No 176
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.88 E-value=1.6e-24 Score=234.90 Aligned_cols=152 Identities=24% Similarity=0.310 Sum_probs=126.7
Q ss_pred hccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH----------
Q 045449 627 TDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK---------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~---------- 677 (823)
.++|...+.||.|+ ...||||++.... ....+.+.+|+++++++ +||||++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 46788889999986 1259999987543 34557899999999999 8999998
Q ss_pred --------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEE
Q 045449 678 --------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAH 713 (823)
Q Consensus 678 --------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~k 713 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+|
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k 204 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 204 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEE
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEE
Confidence 124788899999999999999999999999999999
Q ss_pred EeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 714 ISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 714 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
|+|||+++...............||+.|+|||++.+..++.++|||||||+++++++ |..||.+.
T Consensus 205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 999999987644333223344567889999999988899999999999999999998 88888764
No 177
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.88 E-value=1.6e-24 Score=230.59 Aligned_cols=151 Identities=29% Similarity=0.393 Sum_probs=122.2
Q ss_pred ccCCccceeeccC----------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN----------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
++|...+.||.|+ +..||||++........+.|.+|++++++++||||++
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4566667777764 4679999998766677788999999999999999997
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcc
Confidence 356889999999999999999999999999999999999999987654322
Q ss_pred c-ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 L-SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. .......+|..|+|||++.+..++.++|||||||+++++++|..|+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 220 (295)
T 3ugc_A 170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220 (295)
T ss_dssp ------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence 1 1223345778899999999889999999999999999999998887654
No 178
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.88 E-value=1.4e-24 Score=234.48 Aligned_cols=152 Identities=21% Similarity=0.302 Sum_probs=122.2
Q ss_pred ccCCccceeeccC------------Ce----EEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 628 DRFSENNLIGIGN------------GM----EVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
++|...+.||.|+ +. .||+|++.... ....+.+.+|+.++++++||||++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v 92 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV 92 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence 4566777888876 12 27888775332 222356789999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 172 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172 (325)
T ss_dssp EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence 35789999999999999999999999999999999999999999876544433
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
......||+.|+|||++.++.++.++||||+||++|++++ |..||.+..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 3445678889999999998899999999999999999999 999997643
No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.88 E-value=4.4e-24 Score=235.59 Aligned_cols=146 Identities=15% Similarity=0.248 Sum_probs=119.0
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh---hHHHHHHHHHHH---HHHhhcchhhHHHH----------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ---YERALKSFEDEC---EVRKRIRHRNLVKI---------- 678 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~~---------- 678 (823)
.++|...+.||.|+ |..||||++... .....+.|.+|+ +.+++++|||||++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677778899885 667999998632 234557899999 55666689999752
Q ss_pred ------------------------------------------------------------HHHHHHHhhhcCCCCEEecc
Q 045449 679 ------------------------------------------------------------ISSSLEYLHFGHSIPIIHCD 698 (823)
Q Consensus 679 ------------------------------------------------------------~~~~l~~L~~~h~~~ivHrd 698 (823)
+.|++.+|+|+|+.+|+|||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 35778899999999999999
Q ss_pred CCCCCEEeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCC-----------ccccccceehhhhhhcc
Q 045449 699 LKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKG-----------RVSTRGDVCSFGIISGG 767 (823)
Q Consensus 699 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~S~Gvv~~~ 767 (823)
|||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+. .++.++|||||||++|+
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999986432 2234567 999999999887 89999999999999999
Q ss_pred ccCCCCCcCCC
Q 045449 768 KETRSMTVGET 778 (823)
Q Consensus 768 ~~~~~~~~~~~ 778 (823)
+++|..||.+.
T Consensus 306 lltg~~Pf~~~ 316 (377)
T 3byv_A 306 IWCADLPITKD 316 (377)
T ss_dssp HHHSSCCC---
T ss_pred HHHCCCCCccc
Confidence 99999999664
No 180
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=7.5e-24 Score=232.60 Aligned_cols=147 Identities=30% Similarity=0.372 Sum_probs=122.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |..||||++... .....+++.+|++++++++||||++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35677777788775 677999998543 2445578999999999999999987
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 181 (367)
T 1cm8_A 104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-- 181 (367)
T ss_dssp CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc--
Confidence 3568999999999999999999999999999999999999999875432
Q ss_pred cccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|+|||++.+ ..++.++||||+||+++++++|+.||.+.
T Consensus 182 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 182 ---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp ---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 234678999999998876 67999999999999999999999999764
No 181
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.88 E-value=4.1e-24 Score=229.99 Aligned_cols=150 Identities=27% Similarity=0.346 Sum_probs=114.2
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ |..||||++.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 34666667777764 6779999986433 223357889999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp CCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred ecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 245889999999999999999999999999999999999999987643221
Q ss_pred cccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
......||+.|+|||++.+. .++.++||||+||++|++++|..||.+.
T Consensus 164 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 164 --TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp --CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred --cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22345789999999998764 6899999999999999999999999764
No 182
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.88 E-value=5.4e-24 Score=228.04 Aligned_cols=150 Identities=30% Similarity=0.368 Sum_probs=122.9
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhh-----HHHHHHHHHHHHHHhhcc---hhhHHH--------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQY-----ERALKSFEDECEVRKRIR---HRNLVK-------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~-------- 677 (823)
.+++|...+.||.|+ ++.||||++.... ......+.+|++++++++ ||||++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 367899899999886 5679999986322 111245667887777775 999997
Q ss_pred --------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccc
Q 045449 678 --------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGI 719 (823)
Q Consensus 678 --------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGl 719 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 367899999999999999999999999999999999999999
Q ss_pred ccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 720 AKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 720 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
|+...... ......||+.|+|||++.+..++.++||||+||++|++++|..||.+.
T Consensus 167 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 167 ARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp TTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred ccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 98764332 234567999999999999999999999999999999999999999664
No 183
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.88 E-value=1.5e-24 Score=234.47 Aligned_cols=152 Identities=24% Similarity=0.302 Sum_probs=117.2
Q ss_pred ccCCccceeeccC------------Ce----EEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 628 DRFSENNLIGIGN------------GM----EVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
++|...+.||.|+ +. .||+|.+.... ....+.+.+|+.++++++||||++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v 94 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence 5678888899886 11 25777775322 234468999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~ 174 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence 35788999999999999999999999999999999999999998765443333
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
......||+.|+|||++.+..++.++||||+||++|++++ |..||....
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 224 (327)
T 3lzb_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 3344567889999999999999999999999999999999 999997653
No 184
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.88 E-value=3.8e-24 Score=234.92 Aligned_cols=158 Identities=26% Similarity=0.335 Sum_probs=129.8
Q ss_pred HHHHHHhccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------
Q 045449 621 HELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------- 677 (823)
Q Consensus 621 ~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------- 677 (823)
.++....++|...+.||.|+ +..||||++.... ....+.+.+|++++.+++||||++
T Consensus 20 g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 99 (364)
T 3qyz_A 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI 99 (364)
T ss_dssp -CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred cEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence 44444567899999999986 5679999986432 445578999999999999999986
Q ss_pred ---------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccC
Q 045449 678 ---------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~~~~~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 100 EQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp TTCCCEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred cccceEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 36789999999999999999999999999999999999999998764
Q ss_pred CCCccc-cccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLS-KQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...... .....+||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 332211 1234589999999998654 45899999999999999999999999664
No 185
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.88 E-value=6.1e-24 Score=228.10 Aligned_cols=153 Identities=24% Similarity=0.311 Sum_probs=127.6
Q ss_pred hccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 627 TDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677777888775 2569999997543 455678999999999999999997
Q ss_pred -----------------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCE
Q 045449 678 -----------------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNV 704 (823)
Q Consensus 678 -----------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~Ni 704 (823)
++.|++++|+|+|+.+|+||||||+||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NI 181 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheE
Confidence 134788899999999999999999999
Q ss_pred EeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 705 LLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 705 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||+++++++ |..||.+..
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999987655443333344567899999999988889999999999999999999 999987653
No 186
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.88 E-value=8e-24 Score=225.74 Aligned_cols=142 Identities=30% Similarity=0.404 Sum_probs=115.7
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhh--cchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKR--IRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++..... +.+.+|.+++.. ++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 46788888999886 67799999976533 456667777666 79999998
Q ss_pred --------------------------HHHHHHHHhhhcC--------CCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 678 --------------------------IISSSLEYLHFGH--------SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h--------~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
++.|++.+|+|+| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 84 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp EECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 3568888888889 999999999999999999999999999999876
Q ss_pred CCCCccc--cccccccCCCcCcccccCCC------ccccccceehhhhhhccccCC
Q 045449 724 SGEDQLS--KQTQTLATIGYMAPEYGTKG------RVSTRGDVCSFGIISGGKETR 771 (823)
Q Consensus 724 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gvv~~~~~~~ 771 (823)
....... ......||+.|+|||++.+. .++.++|||||||++|++++|
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 5433211 12335799999999998876 567899999999999999999
No 187
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.88 E-value=9.1e-25 Score=234.40 Aligned_cols=146 Identities=23% Similarity=0.275 Sum_probs=116.9
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhc-chhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRI-RHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~--------------- 677 (823)
++|+..+.||.|+ ++.||||++.... ......+..|+..+.++ +||||++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 6788889999986 6679999885422 33334566666666665 8999987
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~---~~ 213 (311)
T 3p1a_A 137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---AG 213 (311)
T ss_dssp ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--------
T ss_pred eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC---CC
Confidence 46788999999999999999999999999999999999999998764332 22
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
....||+.|+|||++.+ .++.++|||||||+++++++|..++..
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 34569999999998875 799999999999999999999766543
No 188
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.88 E-value=4.4e-24 Score=225.56 Aligned_cols=152 Identities=22% Similarity=0.297 Sum_probs=115.4
Q ss_pred hccCCccceeeccC---------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN---------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.|.+|+.++++++||||++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv 93 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 93 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence 35677778888875 2358999987532 455678999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-Y 172 (281)
T ss_dssp EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------------
T ss_pred EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccc-c
Confidence 356889999999999999999999999999999999999999987644322 1
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
......+|+.|+|||++.+..++.++||||+||+++++++ |..||.+..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~ 222 (281)
T 1mp8_A 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222 (281)
T ss_dssp ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC
Confidence 2233457889999999988899999999999999999986 888987653
No 189
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.88 E-value=7.9e-24 Score=249.94 Aligned_cols=150 Identities=23% Similarity=0.189 Sum_probs=127.7
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhc-chhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRI-RHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~------------- 677 (823)
.++|...+.||+|+ ++.||||++.... ....+.+..|.+++..+ +||+|++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 46788888999886 5669999997543 22346788999999987 7899887
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
+++|++.+|+|+|+.+|+||||||+|||++.++++||+|||+|+.......
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~-- 497 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-- 497 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC--
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc--
Confidence 468999999999999999999999999999999999999999986433222
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.
T Consensus 498 ~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 234578999999999999999999999999999999999999999764
No 190
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.88 E-value=8.8e-24 Score=232.60 Aligned_cols=149 Identities=28% Similarity=0.317 Sum_probs=118.9
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ +..||||++... .....+.+.+|+.++++++||||++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 36788888899886 567999998643 2445578999999999999999986
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+|+......
T Consensus 104 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 181 (371)
T 2xrw_A 104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 181 (371)
T ss_dssp EEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred ceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--
Confidence 36789999999999999999999999999999999999999998754322
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+..++.++||||+||+++++++|..||.+.
T Consensus 182 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 182 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ---------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 223467999999999999989999999999999999999999999764
No 191
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.88 E-value=4e-24 Score=224.42 Aligned_cols=148 Identities=26% Similarity=0.394 Sum_probs=115.9
Q ss_pred ccCCccceeeccC----------CeEEEEEEehHhhH----HHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN----------GMEVAVKVFHQQYE----RALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 5677788899886 57799999875432 23468999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCC---EEeccCCCCCEEeCC--------CCcEEEeeccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIP---IIHCDLKPSNVLLDE--------DMVAHISDFGIAKLL 723 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~---ivHrdlk~~NiLl~~--------~~~~kl~DfGla~~~ 723 (823)
++.|++.+|+|+|+.+ |+||||||+||+++. ++.+||+|||+++..
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~ 166 (271)
T 3dtc_A 87 FARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166 (271)
T ss_dssp CCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred cCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence 3578889999999998 999999999999986 678999999999865
Q ss_pred CCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 724 SGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 724 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.... .....||+.|+|||++.+..++.++||||+||+++++++|..||.+..
T Consensus 167 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 218 (271)
T 3dtc_A 167 HRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4332 224579999999999988889999999999999999999999997754
No 192
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.88 E-value=4.3e-24 Score=224.81 Aligned_cols=149 Identities=25% Similarity=0.417 Sum_probs=109.0
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ ++.||||++.... ....+.+.+|++++++++||||++
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4566667777664 6789999986432 233468899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 93 e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~ 169 (275)
T 2eue_A 93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LK 169 (275)
T ss_dssp ECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------------
T ss_pred hhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCccc---cc
Confidence 467899999999999999999999999999999999999999987643322 23
Q ss_pred ccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCCc
Q 045449 734 QTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
...||+.|+|||++.+..+ +.++||||+||+++++++|+.||.+..
T Consensus 170 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp -----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 4569999999999887765 789999999999999999999997653
No 193
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=4.2e-24 Score=232.68 Aligned_cols=153 Identities=22% Similarity=0.323 Sum_probs=125.3
Q ss_pred hccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH----------
Q 045449 627 TDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK---------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~---------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++.++ +||||++
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788888999886 2359999997543 33457899999999999 8999997
Q ss_pred -----------------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCE
Q 045449 678 -----------------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNV 704 (823)
Q Consensus 678 -----------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~Ni 704 (823)
++.|++++|+|+|+.+|+||||||+||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI 203 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV 203 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhE
Confidence 134788899999999999999999999
Q ss_pred EeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 705 LLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 705 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||+++++++ |..||.+..
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 999999999999999987654433333345568899999999988899999999999999999998 999987653
No 194
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.88 E-value=2.5e-24 Score=228.26 Aligned_cols=149 Identities=26% Similarity=0.368 Sum_probs=120.4
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4567777888775 5679999986432 222367889999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~ 159 (288)
T 1ob3_A 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--KYTH 159 (288)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred cCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--cccc
Confidence 367899999999999999999999999999999999999999987643221 2234
Q ss_pred cccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 735 TLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..||+.|+|||++.+. .++.++||||+||+++++++|..||.+.
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5789999999998764 5899999999999999999999999764
No 195
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.88 E-value=1.2e-23 Score=222.40 Aligned_cols=149 Identities=27% Similarity=0.431 Sum_probs=126.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788888898875 6679999986543 445578999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc---EEEeecccccccCCCCcc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV---AHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~---~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|.|+|+.+|+||||||+||+++.++. +||+|||+++.......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~- 163 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA- 163 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB-
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc-
Confidence 3678899999999999999999999999986554 99999999987653322
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+..++.++||||+||+++++++|..||.+.
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 210 (284)
T 3kk8_A 164 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210 (284)
T ss_dssp --CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC
Confidence 23467999999999999999999999999999999999999998664
No 196
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.88 E-value=4e-24 Score=233.12 Aligned_cols=148 Identities=28% Similarity=0.343 Sum_probs=111.1
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
..++|...+.||+|+ +..||||++.... ..+.+.+|++++++++||||++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 356788889999886 5679999997553 3367889999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeecccccccCCCCccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--- 205 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--- 205 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc---
Confidence 3678899999999999999999999999975 7899999999998764322
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
......||+.|+|||++.+..++.++|||||||++|++++|..||.+.
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 253 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 223467999999999999989999999999999999999999998654
No 197
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.88 E-value=2.2e-24 Score=233.81 Aligned_cols=151 Identities=24% Similarity=0.289 Sum_probs=127.2
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhhH--------HHHHHHHHHHHHHhhcchhhHHH--------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQYE--------RALKSFEDECEVRKRIRHRNLVK-------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~-------- 677 (823)
..++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356788888899886 66799999875421 12346788999999999999998
Q ss_pred ---------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccC
Q 045449 678 ---------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 46788999999999999999999999999999999999999998765
Q ss_pred CCCccccccccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCCc
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.... ....+||+.|+|||++.+..+ +.++||||+||++|++++|..||.+..
T Consensus 182 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 234 (335)
T 3dls_A 182 RGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE 234 (335)
T ss_dssp TTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG
T ss_pred CCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH
Confidence 4322 234679999999999988877 889999999999999999999997643
No 198
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.88 E-value=3.9e-24 Score=235.36 Aligned_cols=151 Identities=21% Similarity=0.416 Sum_probs=113.5
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
++|...+.||.|+ +..||||+++... ....++|.+|++++++++||||++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 4677778888875 2349999997543 445678999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 204 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccc
Confidence 35788899999999999999999999999999999999999998765432211
Q ss_pred -cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 731 -KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 731 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
......+|+.|+|||++.+..++.++|||||||++|++++ |..||.+.
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~ 254 (373)
T 2qol_A 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254 (373)
T ss_dssp ---------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 1122345788999999998899999999999999999887 99998664
No 199
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.88 E-value=2.7e-24 Score=243.19 Aligned_cols=150 Identities=27% Similarity=0.410 Sum_probs=126.5
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||.|+ +..||||+++... ...+.|.+|++++++++|||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~ 265 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 265 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecC
Confidence 46777788888886 4669999997543 23578999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~~~~~ 344 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREG 344 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HHTTCS
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-eeccCC
Confidence 35788999999999999999999999999999999999999998764322 122233
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
..+|+.|+|||++..+.++.++|||||||+++++++ |..||.+.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~ 389 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 456789999999988899999999999999999998 99999764
No 200
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.88 E-value=2e-23 Score=229.83 Aligned_cols=146 Identities=12% Similarity=0.146 Sum_probs=114.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhc--chhhHHH-------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRI--RHRNLVK------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~------------- 677 (823)
..|...+.||.|+ +..||||++.... ....+.+.+|++++..+ +||||++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4577788899886 6779999997532 34556788886655555 5999653
Q ss_pred ---------------------------------------------------------HHHHHHHHhhhcCCCCEEeccCC
Q 045449 678 ---------------------------------------------------------IISSSLEYLHFGHSIPIIHCDLK 700 (823)
Q Consensus 678 ---------------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk 700 (823)
++.|++.+|+|+|+.+|+|||||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDik 221 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFT 221 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCC
Confidence 12688899999999999999999
Q ss_pred CCCEEeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCC--CccccccceehhhhhhccccCCCCCcCCC
Q 045449 701 PSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTK--GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 701 ~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
|+|||++.++.+||+|||+|+..... .....||+.|+|||++.+ ..++.++|||||||++|++++|..||.+.
T Consensus 222 p~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 222 PDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp GGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred HHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999875422 113567799999999987 67999999999999999999999999775
No 201
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.8e-22 Score=213.44 Aligned_cols=208 Identities=23% Similarity=0.331 Sum_probs=122.0
Q ss_pred EEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEe
Q 045449 258 LNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIV 337 (823)
Q Consensus 258 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L 337 (823)
+.+..+.+...+ .+.++++|++|++++|.++.. | .+..+++|++|++++|.+++.. . +..+++|++|++
T Consensus 24 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~------~-~~~l~~L~~L~L 92 (308)
T 1h6u_A 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLA------P-LKNLTKITELEL 92 (308)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG------G-GTTCCSCCEEEC
T ss_pred HHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCCh------h-HccCCCCCEEEc
Confidence 344455554332 245677888888888888753 3 5777888888888888877651 2 667777777777
Q ss_pred ecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCC
Q 045449 338 TGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAG 417 (823)
Q Consensus 338 s~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 417 (823)
++|.+++. | .+..+ .+|++|++++|++++.. .+..+++|++|++++|++++..+ +..+++|++|+|++|++++
T Consensus 93 ~~n~l~~~-~-~~~~l-~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 93 SGNPLKNV-S-AIAGL-QSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CSCCCSCC-G-GGTTC-TTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCcCCCc-h-hhcCC-CCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 77777653 2 35554 45666666666665432 15555566666666666554332 5555555556665555554
Q ss_pred cchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 418 PITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 418 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|.+++
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 332 5555555555555555554332 4555555555555555555432 4555555555555555543
No 202
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.88 E-value=7.5e-24 Score=239.13 Aligned_cols=146 Identities=31% Similarity=0.399 Sum_probs=123.7
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
.++|...+.||.|+ +..||||+++... ..+.|.+|++++++++||||++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 35677778899886 6779999997653 3468999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++++|+|+|+.+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 344 (450)
T 1k9a_A 270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QD 344 (450)
T ss_dssp TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----cc
Confidence 3578899999999999999999999999999999999999999864322 12
Q ss_pred ccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 734 QTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
...+++.|+|||++.+..++.++|||||||++|++++ |..||.+..
T Consensus 345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 391 (450)
T 1k9a_A 345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391 (450)
T ss_dssp --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 2357899999999999999999999999999999998 999987653
No 203
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.88 E-value=7.2e-24 Score=234.25 Aligned_cols=152 Identities=30% Similarity=0.363 Sum_probs=127.7
Q ss_pred hccCCccceeeccC-------------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH--------
Q 045449 627 TDRFSENNLIGIGN-------------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK-------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-------------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~-------- 677 (823)
.++|...+.||+|+ +..||||++.... ....+++.+|+++++++ +||||++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 35777778888886 1359999997543 45567899999999999 9999998
Q ss_pred ------------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC
Q 045449 678 ------------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED 709 (823)
Q Consensus 678 ------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~ 709 (823)
++.|++.+|.|+|+.+|+||||||+||+++.+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 227 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC
Confidence 24578889999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 710 MVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 710 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
+.+||+|||+|+...............||+.|+|||++.+..++.++|||||||+++++++ |..||.+.
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999987654443333445568899999999999999999999999999999998 99998764
No 204
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.88 E-value=8.6e-24 Score=231.95 Aligned_cols=147 Identities=33% Similarity=0.391 Sum_probs=114.0
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |..||||++... .....+.+.+|++++++++||||++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36777777888775 677999998643 2345578899999999999999987
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-- 185 (367)
T 2fst_X 108 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-- 185 (367)
T ss_dssp CCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------
T ss_pred eEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc--
Confidence 3678999999999999999999999999999999999999999875422
Q ss_pred cccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|+|||++.+ ..++.++||||+||+++++++|+.||.+.
T Consensus 186 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 233 (367)
T 2fst_X 186 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233 (367)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 234679999999999876 67899999999999999999999999764
No 205
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.88 E-value=5.6e-24 Score=225.36 Aligned_cols=147 Identities=22% Similarity=0.305 Sum_probs=121.0
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh----HHH---HHHHHHHHHHHhhcchhhHHH-----------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY----ERA---LKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~----~~~---~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
++|...+.||.|+ +..||||++.... ... .+.|.+|++++++++||||++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 5677777888775 5679999985322 111 268999999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCC--EEeccCCCCCEEeCCCCc-----EEEeecccccc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIP--IIHCDLKPSNVLLDEDMV-----AHISDFGIAKL 722 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~--ivHrdlk~~NiLl~~~~~-----~kl~DfGla~~ 722 (823)
++.|++.+|+|+|+.+ |+||||||+||+++.++. +||+|||+++.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~ 178 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178 (287)
T ss_dssp EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBC
T ss_pred EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccc
Confidence 4678899999999999 999999999999987765 99999999985
Q ss_pred cCCCCccccccccccCCCcCccccc--CCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 723 LSGEDQLSKQTQTLATIGYMAPEYG--TKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 723 ~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
... ......||+.|+|||++ ....++.++||||+||++|++++|..||....
T Consensus 179 ~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 179 SVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp CSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 432 12346799999999998 44567899999999999999999999997643
No 206
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.88 E-value=9.8e-24 Score=227.25 Aligned_cols=147 Identities=25% Similarity=0.391 Sum_probs=124.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||+|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 5677888899886 6679999997543 233567889999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe----CCCCcEEEeecccccccCC
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL----DEDMVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl----~~~~~~kl~DfGla~~~~~ 725 (823)
++.|++.+|+|+|+.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 35788999999999999999999999999 7888999999999987654
Q ss_pred CCccccccccccCCCcCcccccC--------CCccccccceehhhhhhccccCCCCCcCC
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGT--------KGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
... .....||+.|+|||++. +..++.++|||||||++|++++|..||..
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 225 (319)
T 4euu_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (319)
T ss_dssp TCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred CCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 332 23457999999999875 46789999999999999999999999964
No 207
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.87 E-value=8.6e-24 Score=228.72 Aligned_cols=151 Identities=26% Similarity=0.345 Sum_probs=123.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 46788888899885 6679999986332 334578999999999999999873
Q ss_pred --------------------------------------------------------------------------------
Q 045449 678 -------------------------------------------------------------------------------- 677 (823)
Q Consensus 678 -------------------------------------------------------------------------------- 677 (823)
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence
Q ss_pred ----HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc----------ccccccccCCCcCc
Q 045449 678 ----IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL----------SKQTQTLATIGYMA 743 (823)
Q Consensus 678 ----~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~----------~~~~~~~gt~~y~a 743 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++........ ......+||+.|+|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 3568889999999999999999999999999999999999999876543211 12234579999999
Q ss_pred ccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 744 PEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 744 PE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
||++.+..++.++||||+||++++++++..++.+
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~ 278 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME 278 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH
Confidence 9999998999999999999999999998776543
No 208
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.87 E-value=6.8e-24 Score=237.25 Aligned_cols=144 Identities=28% Similarity=0.366 Sum_probs=120.1
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.+|...+.||+|+ |..||||++.... +.+.+|++++++++|||||+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3577778899886 6679999986542 23457999999999999987
Q ss_pred -------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC-CcEEEeecccccccCC
Q 045449 678 -------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED-MVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 -------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~-~~~kl~DfGla~~~~~ 725 (823)
++.|++.+|+|+|+.+|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 130 lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp EEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 25688999999999999999999999999955 6789999999987644
Q ss_pred CCccccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... ....+||+.|+|||++.+. .|+.++||||+||++|+|++|+.||.+.
T Consensus 210 ~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 210 GEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp TCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 322 2346799999999998764 7899999999999999999999999764
No 209
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.87 E-value=9.6e-24 Score=224.79 Aligned_cols=147 Identities=21% Similarity=0.319 Sum_probs=120.4
Q ss_pred CCccceeeccC---------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 630 FSENNLIGIGN---------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 630 f~~~~~lg~g~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
|...+.||.|+ +..||||++.... ....+.|.+|++++++++||||++
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 44457788876 1258999987533 455678999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc--c
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ--L 729 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~--~ 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV 182 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence 356889999999999999999999999999999999999999986543321 1
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVG 776 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~ 776 (823)
.......+|+.|+|||.+.+..++.++||||+||+++++++|..|+.
T Consensus 183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~ 229 (298)
T 3pls_A 183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229 (298)
T ss_dssp CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCC
Confidence 12234568899999999999999999999999999999999665543
No 210
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.87 E-value=5.5e-24 Score=228.39 Aligned_cols=152 Identities=25% Similarity=0.300 Sum_probs=126.5
Q ss_pred ccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH-----------
Q 045449 628 DRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK----------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~----------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|+++++++ +||||++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5677778888775 2469999997543 34457899999999999 9999997
Q ss_pred -----------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC
Q 045449 678 -----------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 678 -----------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~ 710 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 182 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR 182 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCC
Confidence 134778899999999999999999999999999
Q ss_pred cEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 711 VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 711 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.+||+|||+++...............||+.|+|||++.+..++.++||||+||+++++++ |..||.+..
T Consensus 183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 999999999987655443333344567889999999988899999999999999999998 999987653
No 211
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.87 E-value=4.3e-24 Score=229.56 Aligned_cols=161 Identities=24% Similarity=0.292 Sum_probs=132.9
Q ss_pred cCHHHHHHHhccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH-
Q 045449 618 FSYHELLRATDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK- 677 (823)
Q Consensus 618 ~~~~~l~~at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~- 677 (823)
+...+..-..++|...+.||.|+ +..||||++.... ....+.+.+|++++.++ +||||++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44445555567888889999886 2568999987543 34557899999999999 7999997
Q ss_pred --------------------------------------------------------HHHHHHHHhhhcCCCCEEeccCCC
Q 045449 678 --------------------------------------------------------IISSSLEYLHFGHSIPIIHCDLKP 701 (823)
Q Consensus 678 --------------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~ 701 (823)
++.|++.+|+|+|+.+|+||||||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp 176 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCcc
Confidence 135788999999999999999999
Q ss_pred CCEEeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 702 SNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 702 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||+||+++++++ |..||.+.
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 999999999999999999987654433333345678999999999988899999999999999999998 99998664
No 212
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.87 E-value=7.1e-24 Score=222.20 Aligned_cols=151 Identities=25% Similarity=0.337 Sum_probs=125.9
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||.|+ +..||||++..... ..+++.+|++++.+++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35677778888876 45699999975432 2367999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~ 164 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVG 164 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EECCS
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hcccC
Confidence 357889999999999999999999999999999999999999987654332 22334
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
..+|+.|+|||++.+..++.++||||+||+++++++ |..||....
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 557788999999988899999999999999999998 999987643
No 213
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.87 E-value=9.6e-24 Score=229.91 Aligned_cols=158 Identities=22% Similarity=0.333 Sum_probs=126.5
Q ss_pred HHHHHhccCCccceeeccC------------CeEEEEEEehHhh-----HHHHHHHHHHHHHHhhcchhhHHH-------
Q 045449 622 ELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQY-----ERALKSFEDECEVRKRIRHRNLVK------- 677 (823)
Q Consensus 622 ~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~------- 677 (823)
++....++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456678899999999986 5568999997543 234578999999999999999986
Q ss_pred -------------------------------------------------------------------------HHHHHHH
Q 045449 678 -------------------------------------------------------------------------IISSSLE 684 (823)
Q Consensus 678 -------------------------------------------------------------------------~~~~~l~ 684 (823)
++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 2357888
Q ss_pred HhhhcCCCCEEeccCCCCCEEeCCCC--cEEEeecccccccCCCCc--cccccccccCCCcCcccccCC--Cccccccce
Q 045449 685 YLHFGHSIPIIHCDLKPSNVLLDEDM--VAHISDFGIAKLLSGEDQ--LSKQTQTLATIGYMAPEYGTK--GRVSTRGDV 758 (823)
Q Consensus 685 ~L~~~h~~~ivHrdlk~~NiLl~~~~--~~kl~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv 758 (823)
+|+|+|+.+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+ ..++.++||
T Consensus 180 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 99999999999999999999998766 899999999986533211 112345679999999999865 678999999
Q ss_pred ehhhhhhccccCCCCCcCCCc
Q 045449 759 CSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 759 ~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
|||||+++++++|..||.+..
T Consensus 260 wslG~il~el~~g~~pf~~~~ 280 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVN 280 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999997653
No 214
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.87 E-value=9.3e-24 Score=228.96 Aligned_cols=151 Identities=25% Similarity=0.284 Sum_probs=111.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc-hhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR-HRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~----------------- 677 (823)
.+|...+.||.|+ +..||||++........+.+.+|+.++.++. ||||++
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 5788888899886 5679999987666666678999999999996 999986
Q ss_pred ---------------------------------HHHHHHHHhhhcCCCC--EEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 678 ---------------------------------IISSSLEYLHFGHSIP--IIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h~~~--ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
++.|++.+|+|+|+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 108 EFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred eEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 3568889999999999 99999999999999999999999999987
Q ss_pred cCCCCccc----------cccccccCCCcCccccc---CCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 723 LSGEDQLS----------KQTQTLATIGYMAPEYG---TKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 723 ~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
........ ......||+.|+|||++ .+..++.++|||||||+++++++|..||.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 256 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence 65332211 11245689999999998 5667899999999999999999999998653
No 215
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.87 E-value=1.1e-23 Score=222.12 Aligned_cols=150 Identities=24% Similarity=0.358 Sum_probs=124.4
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
+.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 356788888999886 55699999865432 22467899999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~--- 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 163 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc---
Confidence 36788999999999999999999999999999999999999986543321
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.....||+.|+|||++.+..++.++||||+||+++++++|..||....
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred -ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 234579999999999999899999999999999999999999997643
No 216
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.87 E-value=5.9e-24 Score=226.43 Aligned_cols=149 Identities=19% Similarity=0.201 Sum_probs=123.6
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++.... ..+.+.+|++++.++ +|+++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 4677778888875 6779999986442 224688899999999 7888876
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc-----EEEeecccccccCCCCcc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV-----AHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~-----~kl~DfGla~~~~~~~~~ 729 (823)
++.|++++|+|+|+.+|+||||||+||+++.++. +||+|||+++........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (298)
T 1csn_A 88 LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK 167 (298)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred cCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccc
Confidence 4678999999999999999999999999987765 999999999876543221
Q ss_pred -----ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 -----SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.......||+.|+|||++.+..++.++|||||||+++++++|..||...
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 221 (298)
T 1csn_A 168 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 221 (298)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence 1234567999999999999999999999999999999999999999774
No 217
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.87 E-value=6.1e-24 Score=242.69 Aligned_cols=150 Identities=24% Similarity=0.393 Sum_probs=125.4
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
++|...+.||.|+ +..||||+++.... ..++|.+|++++++++|||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 4566677788775 56799999975432 3468999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-eeecC
Confidence 35688999999999999999999999999999999999999998765332 22233
Q ss_pred ccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 734 QTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
...+++.|+|||++.+..++.++|||||||++|++++ |..||.+..
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~ 424 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence 4456789999999998899999999999999999998 888887643
No 218
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.87 E-value=8.8e-24 Score=222.63 Aligned_cols=149 Identities=22% Similarity=0.336 Sum_probs=126.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||+|++........+.+.+|++++++++||||++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 46788888899886 4568999997665555678999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe---CCCCcEEEeecccccccCCCCcccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl---~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|.|+|+.+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--- 164 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--- 164 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC---
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc---
Confidence 46788999999999999999999999999 7788999999999987654322
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.....||+.|+|||++.+ .++.++||||+||+++++++|..||....
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT 211 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence 234579999999998865 48999999999999999999999997643
No 219
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.87 E-value=1.3e-23 Score=221.22 Aligned_cols=152 Identities=26% Similarity=0.371 Sum_probs=127.1
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 45677778888875 5679999986443 344578999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||.++............
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 165 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence 46789999999999999999999999999999999999999998754332222234
Q ss_pred ccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++.+..+ +.++||||+||+++++++|..||...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 211 (276)
T 2yex_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (276)
T ss_dssp CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Confidence 5679999999999987765 78999999999999999999999764
No 220
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.87 E-value=3.9e-24 Score=224.37 Aligned_cols=150 Identities=25% Similarity=0.361 Sum_probs=125.2
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
++|...+.||.|+ +..||||++..... ..+++.+|++++++++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4677778888886 46699999975432 2357999999999999999998
Q ss_pred ----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccccc
Q 045449 678 ----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQT 735 (823)
Q Consensus 678 ----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 735 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ......
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~ 167 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGT 167 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTST
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccccc-ccccCc
Confidence 357889999999999999999999999999999999999999987643322 223345
Q ss_pred ccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 736 LATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 736 ~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.+|+.|+|||++.+..++.++||||+||+++++++ |..||....
T Consensus 168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 67889999999988899999999999999999999 899987643
No 221
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.87 E-value=2e-23 Score=223.67 Aligned_cols=152 Identities=24% Similarity=0.309 Sum_probs=117.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 46788888888875 5679999997543 345578999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~ 191 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL-TQ 191 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc-cc
Confidence 367889999999999999999999999999999999999999987643321 22
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.....||+.|+|||++.+..++.++|||||||+++++++|..||....
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 239 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence 334579999999999999899999999999999999999999997654
No 222
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.87 E-value=7.7e-24 Score=230.43 Aligned_cols=154 Identities=23% Similarity=0.295 Sum_probs=126.8
Q ss_pred HhccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------
Q 045449 626 ATDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------- 677 (823)
..++|...+.||.|+ +..||||+++... ....+.|.+|++++++++||||++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 356788888888876 1679999997543 445678999999999999999997
Q ss_pred ------------------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCC
Q 045449 678 ------------------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSN 703 (823)
Q Consensus 678 ------------------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~N 703 (823)
++.|++++|+|+|+.+|+||||||+|
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N 204 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN 204 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce
Confidence 13477889999999999999999999
Q ss_pred EEeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 704 VLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 704 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
|+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|++++ |..||.+..
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999987644332223344568999999999988899999999999999999998 888987653
No 223
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.87 E-value=1.8e-23 Score=224.56 Aligned_cols=154 Identities=20% Similarity=0.318 Sum_probs=117.7
Q ss_pred HhccCCccceeeccC---------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 626 ATDRFSENNLIGIGN---------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~---------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
..++|...+.||.|+ +..||||++... .....+.|.+|++++++++||||++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 456777778888876 235999998754 2445678999999999999999987
Q ss_pred ----------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeec
Q 045449 678 ----------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDF 717 (823)
Q Consensus 678 ----------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~Df 717 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSC
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeec
Confidence 3568889999999999999999999999999999999999
Q ss_pred ccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 718 GIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 718 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
|+++...............+++.|+|||++.+..++.++|||||||+++++++ |..||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 99987654433223334567889999999998899999999999999999999 888886643
No 224
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.87 E-value=2.7e-23 Score=219.08 Aligned_cols=150 Identities=26% Similarity=0.419 Sum_probs=105.9
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35677778888875 56799999975532 22467999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 167 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-- 167 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC--
Confidence 367889999999999999999999999999999999999999987643221
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
......||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 123457899999999999888999999999999999999999998654
No 225
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.87 E-value=1.4e-23 Score=228.65 Aligned_cols=152 Identities=26% Similarity=0.335 Sum_probs=120.2
Q ss_pred HHhccCCccceeeccC------------CeEEEEEEehHhhH-----HHHHHHHHHHHHHhhcchhhHHH----------
Q 045449 625 RATDRFSENNLIGIGN------------GMEVAVKVFHQQYE-----RALKSFEDECEVRKRIRHRNLVK---------- 677 (823)
Q Consensus 625 ~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~---------- 677 (823)
...++|...+.||.|+ |..||||++..... ...+.+.+|++++++++||||++
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 3457888889999886 56799999975432 12347889999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (346)
T 1ua2_A 87 ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN 166 (346)
T ss_dssp CEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred eEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence 46788999999999999999999999999999999999999998764332
Q ss_pred ccccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 728 QLSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 728 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. ......||+.|+|||++.+. .++.++||||+||++|++++|..||.+.
T Consensus 167 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 167 R--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp C--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 2 23456799999999998654 4899999999999999999999888654
No 226
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.87 E-value=1.1e-23 Score=235.59 Aligned_cols=151 Identities=26% Similarity=0.349 Sum_probs=118.0
Q ss_pred HHhccCCccceeeccC------------CeEEEEEEehHhh--------HHHHHHHHHHHHHHhhcchhhHHH-------
Q 045449 625 RATDRFSENNLIGIGN------------GMEVAVKVFHQQY--------ERALKSFEDECEVRKRIRHRNLVK------- 677 (823)
Q Consensus 625 ~at~~f~~~~~lg~g~------------~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~------- 677 (823)
...++|...+.||.|+ +..||||++.... ......+.+|++++++++||||++
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3457899999999986 5679999986542 122346889999999999999998
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC---CcEEEeecccccc
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED---MVAHISDFGIAKL 722 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~---~~~kl~DfGla~~ 722 (823)
++.|++.+|+|+|+.+|+||||||+|||++.+ ..+||+|||+|+.
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 46789999999999999999999999999654 4699999999987
Q ss_pred cCCCCccccccccccCCCcCcccccCC---CccccccceehhhhhhccccCCCCCcCCC
Q 045449 723 LSGEDQLSKQTQTLATIGYMAPEYGTK---GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 723 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..... .....+||+.|+|||++.+ ..|+.++||||+||++|++++|..||.+.
T Consensus 292 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~ 347 (419)
T 3i6u_A 292 LGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347 (419)
T ss_dssp CC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred cCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 64322 2344679999999999753 56889999999999999999999999764
No 227
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.9e-22 Score=216.76 Aligned_cols=241 Identities=16% Similarity=0.141 Sum_probs=156.7
Q ss_pred hhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccC-ccccCCCCCCe-EEe
Q 045449 207 ARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIP-SSITNSSKLSD-LEL 284 (823)
Q Consensus 207 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L 284 (823)
+.++.++++++ .+|..+ .+++++|+|++|+|+ .+|...+.++++|++|+|++|++.+.+| .+|.+++++.. +++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 45677778887 455544 256788888888887 6776666668888888888888766555 45677777664 566
Q ss_pred ecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeec-CCCCccCCccccccccccceEEec
Q 045449 285 GENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTG-NPLDGILPKSIGNFSLSLETILMA 363 (823)
Q Consensus 285 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~~~L~~L~L~ 363 (823)
+.|+++.+.|..|..+++|++|++++|.++..++ ..+....++..|++.+ |++....+..|..+...+++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~-----~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD-----VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC-----CTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCc-----hhhcccchhhhhhhccccccccccccchhhcchhhhhhccc
Confidence 6788887777888888888888888888877632 2344556677777755 456655555666654567777777
Q ss_pred CCcceeccCccccCcccccEEEccc-CcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccc
Q 045449 364 NCSISGNIPQVVGNLSNLLVLELGG-NNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS 442 (823)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 442 (823)
+|+|+...+..| ...+|+.|++++ |.++...+..|..+++|++|||++|+|+...+.. +.+|+.|.+.++.--..
T Consensus 163 ~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~ 238 (350)
T 4ay9_X 163 KNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKK 238 (350)
T ss_dssp SSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCC
T ss_pred cccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCc
Confidence 777775444444 345677777764 4455333345677777777777777777443333 33445555444432234
Q ss_pred ccccccCCCCCCeEeccCC
Q 045449 443 IPSCLGNLTSVRVLYLGLN 461 (823)
Q Consensus 443 ~p~~~~~l~~L~~L~Ls~N 461 (823)
+| .+.++++|+.++++++
T Consensus 239 lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 239 LP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CC-CTTTCCSCCEEECSCH
T ss_pred CC-CchhCcChhhCcCCCC
Confidence 55 3666677777776654
No 228
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=8.4e-23 Score=234.57 Aligned_cols=207 Identities=23% Similarity=0.336 Sum_probs=163.3
Q ss_pred ccCCCCCCc-----cceee-eeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEE
Q 045449 32 NWTSSTSVC-----IWIGI-TCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLL 105 (823)
Q Consensus 32 ~W~~~~~~c-----~w~gv-~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 105 (823)
+|..+.++| .|.|+ .|.. .+++.|+|++|++++ +|+.+. ++|++|+|++|+|+ .+| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 787777788 79999 7863 479999999999997 777664 78999999999999 677 457899999
Q ss_pred ECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHH
Q 045449 106 DFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEII 185 (823)
Q Consensus 106 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (823)
+|++|.|++ +|. +.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|.
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----------~l~~L~~L~Ls~N~l~~-lp~------------ 157 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----------LPALLEYINADNNQLTM-LPE------------ 157 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----------CCTTCCEEECCSSCCSC-CCC------------
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----------cCccccEEeCCCCccCc-CCC------------
Confidence 999999987 666 655 89999999999985 443 36789999999999874 443
Q ss_pred HhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCc-------cEE
Q 045449 186 STITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNV-------ETL 258 (823)
Q Consensus 186 ~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L-------~~L 258 (823)
.+++|++|+|++|+|++ +|. |. ++|++|+|++|.|+ .+|. +.. +| ++|
T Consensus 158 ----------------~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~---~L~~~~~~L~~L 212 (571)
T 3cvr_A 158 ----------------LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV---RNHHSEETEIFF 212 (571)
T ss_dssp ----------------CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC-----------CCEEE
T ss_pred ----------------cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH---hhhcccccceEE
Confidence 23467788888998887 565 55 78889999999888 7777 432 55 888
Q ss_pred EeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCc
Q 045449 259 NLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLR 301 (823)
Q Consensus 259 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 301 (823)
+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..++
T Consensus 213 ~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp ECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred ecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 88888887 5777777788888888888888887777666544
No 229
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.87 E-value=9.2e-24 Score=223.02 Aligned_cols=151 Identities=23% Similarity=0.292 Sum_probs=123.0
Q ss_pred hccCCccceeeccC---------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN---------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
.++|...+.||+|+ +..||||++... .....+.|.+|++++++++||||++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v 90 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence 46777778888875 224999998754 2445678999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 169 (281)
T 3cc6_A 91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-Y 169 (281)
T ss_dssp EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc-c
Confidence 356889999999999999999999999999999999999999987654322 1
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
......+|+.|+|||++.+..++.++|||||||+++++++ |..||...
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~ 218 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence 2234467889999999988889999999999999999997 99998654
No 230
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.87 E-value=1e-23 Score=224.35 Aligned_cols=153 Identities=23% Similarity=0.260 Sum_probs=123.1
Q ss_pred HHhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 625 RATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 625 ~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
...++|...+.||.|+ +..||||++.... ..+++.+|++++++++|++++.
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3457888899999886 5679999865442 2246889999999999888775
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe---CCCCcEEEeecccccccCCCCc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl---~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp EECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred EEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 46789999999999999999999999999 7889999999999987654322
Q ss_pred c-----ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 729 L-----SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 729 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
. .......||+.|+|||++.+..++.++||||+||+++++++|+.||.+..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 1 12234679999999999999999999999999999999999999997643
No 231
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.87 E-value=3.1e-23 Score=227.53 Aligned_cols=159 Identities=23% Similarity=0.289 Sum_probs=127.2
Q ss_pred ccCHHHHHHHhccCCccceeeccC-----------CeEEEEEEehHh-----------hHHHHHHHHHHHHHHhhcchhh
Q 045449 617 RFSYHELLRATDRFSENNLIGIGN-----------GMEVAVKVFHQQ-----------YERALKSFEDECEVRKRIRHRN 674 (823)
Q Consensus 617 ~~~~~~l~~at~~f~~~~~lg~g~-----------~~~vavK~~~~~-----------~~~~~~~~~~E~~~l~~l~h~n 674 (823)
+....++....++|...+.||.|+ |..||||++... .....+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 345678888899999999999986 567999988432 2334578999999999999999
Q ss_pred HHH---------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC
Q 045449 675 LVK---------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED 709 (823)
Q Consensus 675 iv~---------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~ 709 (823)
|++ ++.|++.+|+|+|+.+|+||||||+||+++.+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~ 170 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred ccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCC
Confidence 997 36789999999999999999999999999999
Q ss_pred CcEEEeecccccccCCCCccccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 710 MVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 710 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
+.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 171 ~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 171 NDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp CCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999998644322 2234578999999998876 67899999999999999999999999764
No 232
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.87 E-value=1.8e-23 Score=223.89 Aligned_cols=144 Identities=31% Similarity=0.373 Sum_probs=113.0
Q ss_pred ccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------------
Q 045449 628 DRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------------- 677 (823)
++|...+.||+|+ +..||||++.... ..+.|.+|++++++++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred hHeeeeeEeecCCCceEEEEEECCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 4677778888886 5679999996543 3468999999999999999998
Q ss_pred ---------------------HHHHHHHHhhhcCC---CCEEeccCCCCCEEeCCCCc-EEEeecccccccCCCCccccc
Q 045449 678 ---------------------IISSSLEYLHFGHS---IPIIHCDLKPSNVLLDEDMV-AHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 ---------------------~~~~~l~~L~~~h~---~~ivHrdlk~~NiLl~~~~~-~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++++|+|+|+ .+|+||||||+||+++.++. +||+|||+++..... .
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-----~ 160 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----M 160 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----c
Confidence 23455666666666 89999999999999988775 799999999865322 2
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++.+..++.++|||||||+++++++|+.||...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 2346999999999999989999999999999999999999999754
No 233
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.87 E-value=8.9e-24 Score=225.55 Aligned_cols=141 Identities=29% Similarity=0.409 Sum_probs=104.0
Q ss_pred ccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhh--cchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKR--IRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~------------------ 677 (823)
++|...+.||.|+ +..||||++..... +.+.+|.+++.. ++||||++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TTH---HHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEecccch---hhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 5788888899886 56799999975432 567788888887 79999997
Q ss_pred -------------------------HHHHHHHHhhhcC--------CCCEEeccCCCCCEEeCCCCcEEEeecccccccC
Q 045449 678 -------------------------IISSSLEYLHFGH--------SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h--------~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 80 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~ 159 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp EECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEE
T ss_pred EeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceecc
Confidence 2356788888888 9999999999999999999999999999998765
Q ss_pred CCCccc--cccccccCCCcCcccccCCC------ccccccceehhhhhhccccCC
Q 045449 725 GEDQLS--KQTQTLATIGYMAPEYGTKG------RVSTRGDVCSFGIISGGKETR 771 (823)
Q Consensus 725 ~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gvv~~~~~~~ 771 (823)
...... ......||+.|+|||++.+. .++.++|||||||++|++++|
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred CCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 433211 12334799999999998776 556789999999999999999
No 234
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.87 E-value=1.8e-23 Score=222.70 Aligned_cols=150 Identities=24% Similarity=0.321 Sum_probs=120.5
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.+|...+.||.|+ ...||||++.... ....+.|.+|++++++++||||++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 3566677888876 2247999887533 445578999999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence 3568899999999999999999999999999999999999999876443221
Q ss_pred --ccccccccCCCcCcccccCCCccccccceehhhhhhccccCC-CCCcCC
Q 045449 730 --SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETR-SMTVGE 777 (823)
Q Consensus 730 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~-~~~~~~ 777 (823)
.......||+.|+|||.+.+..++.++||||+||+++++++| ..||..
T Consensus 185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 122345678899999999888999999999999999999994 455544
No 235
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.87 E-value=8.1e-24 Score=223.66 Aligned_cols=151 Identities=20% Similarity=0.353 Sum_probs=123.3
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||.|+ +..||||++..... ..+++.+|++++.+++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45677778888875 45699999975532 2367899999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 180 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVG 180 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-HSTTS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccc-ccccC
Confidence 367889999999999999999999999999999999999999987643322 22334
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
..+|+.|+|||++.+..++.++||||+||+++++++ |..||....
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 457888999999998899999999999999999998 999987643
No 236
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.87 E-value=1.2e-23 Score=226.79 Aligned_cols=158 Identities=23% Similarity=0.347 Sum_probs=129.6
Q ss_pred HHHHHHhccCCccceeeccC-----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-----
Q 045449 621 HELLRATDRFSENNLIGIGN-----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----- 677 (823)
Q Consensus 621 ~~l~~at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----- 677 (823)
++...+.++|...+.||.|+ +..||||++.... ......|.+|++++++++||||++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 33444567888888999886 2358999987543 344567999999999999999998
Q ss_pred ---------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcE
Q 045449 678 ---------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVA 712 (823)
Q Consensus 678 ---------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~ 712 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence 24578889999999999999999999999999999
Q ss_pred EEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 713 HISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 713 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
||+|||+++...............||+.|+|||++.+..++.++||||+||+++++++ |..||...
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 9999999987654333233344567899999999988889999999999999999998 88888764
No 237
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.87 E-value=2.8e-23 Score=222.71 Aligned_cols=149 Identities=28% Similarity=0.379 Sum_probs=119.8
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ |..||||++.... ....+.+.+|++++++++||||++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5677788888886 5679999885432 344577899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 160 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--YYD 160 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--ccC
Confidence 356889999999999999999999999999999999999999987653322 223
Q ss_pred ccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 4578999999998875 56899999999999999999999998664
No 238
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.87 E-value=2.5e-23 Score=231.07 Aligned_cols=146 Identities=27% Similarity=0.309 Sum_probs=124.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc--------hhhHHH---------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR--------HRNLVK--------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~--------- 677 (823)
.++|...+.||.|+ ++.||||++... ....+.+.+|++++++++ |+||++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36788889999886 677999999754 344578899999999996 677776
Q ss_pred ------------------------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeCCCC----------
Q 045449 678 ------------------------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLDEDM---------- 710 (823)
Q Consensus 678 ------------------------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~~~~---------- 710 (823)
++.|++.+|+|+|+. +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 467899999999998 999999999999999775
Q ss_pred ---------------------------------------cEEEeecccccccCCCCccccccccccCCCcCcccccCCCc
Q 045449 711 ---------------------------------------VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGR 751 (823)
Q Consensus 711 ---------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 751 (823)
.+||+|||+|+..... ....+||+.|+|||++.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcCCC
Confidence 7999999999876432 23457999999999999989
Q ss_pred cccccceehhhhhhccccCCCCCcCCC
Q 045449 752 VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 752 ~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
++.++|||||||++|++++|..||...
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999999653
No 239
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.87 E-value=6.2e-24 Score=233.23 Aligned_cols=153 Identities=20% Similarity=0.178 Sum_probs=121.1
Q ss_pred HhccCCccceeeccC-----------------CeEEEEEEehHhhHHH-----------HHHHHHHHHHHhhcchhhHHH
Q 045449 626 ATDRFSENNLIGIGN-----------------GMEVAVKVFHQQYERA-----------LKSFEDECEVRKRIRHRNLVK 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~-----------------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 677 (823)
..++|...+.||.|+ +..||||++....... ...+..|+..+.+++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 346788888899886 2568999986443211 123456667778888998876
Q ss_pred --------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC--CCCc
Q 045449 678 --------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD--EDMV 711 (823)
Q Consensus 678 --------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~--~~~~ 711 (823)
++.|++.+|+|+|+.+|+||||||+|||++ .++.
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred EEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence 467889999999999999999999999998 8899
Q ss_pred EEEeecccccccCCCCccc-----cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 712 AHISDFGIAKLLSGEDQLS-----KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 712 ~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
+||+|||+|+.+....... ......||+.|+|||++.+..++.++|||||||++|++++|..||.+.
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9999999998764332111 113345999999999999999999999999999999999999999853
No 240
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.87 E-value=1.8e-23 Score=228.33 Aligned_cols=152 Identities=26% Similarity=0.334 Sum_probs=124.9
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |+.||||++.... ......+.+|++++++++||||++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35777788888875 6679999885432 222357889999999999999986
Q ss_pred ---------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccC
Q 045449 678 ---------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.||+||||||+||+++.++.+||+|||+|+...
T Consensus 96 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp -CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 36788999999999999999999999999999999999999998764
Q ss_pred CCCc--cccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQ--LSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.... ........||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 3221 122345678999999998876 45899999999999999999999998764
No 241
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.87 E-value=2.8e-23 Score=224.95 Aligned_cols=149 Identities=28% Similarity=0.388 Sum_probs=119.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 5677777888775 6679999885332 344567889999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|.|+|+.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 182 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYD 182 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--ccC
Confidence 367889999999999999999999999999999999999999987543322 223
Q ss_pred ccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++.+. .++.++||||+||++|++++|..||...
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 45799999999998775 6899999999999999999999998664
No 242
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.87 E-value=1.7e-23 Score=225.67 Aligned_cols=149 Identities=23% Similarity=0.360 Sum_probs=126.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH------HHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE------RALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
.++|...+.||.|+ |..||||++..... ...+.+.+|++++++++||||++
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 45688888899886 56799999864321 12467999999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC----cEEEeecccccccC
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM----VAHISDFGIAKLLS 724 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~----~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 467889999999999999999999999999887 79999999998765
Q ss_pred CCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.... .....||+.|+|||++.+..++.++||||+||+++++++|..||.+.
T Consensus 171 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 221 (321)
T 2a2a_A 171 DGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (321)
T ss_dssp TTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred cccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence 4322 23457999999999999889999999999999999999999999664
No 243
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.87 E-value=3.9e-23 Score=220.91 Aligned_cols=152 Identities=22% Similarity=0.309 Sum_probs=126.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH----HHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE----RALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46788888999886 56799999976532 34578999999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 35688999999999999999999999999999999999999998765332
Q ss_pred ccccccccccCCCcCcccccCCCc--cccccceehhhhhhccccCCCCCcCCC
Q 045449 728 QLSKQTQTLATIGYMAPEYGTKGR--VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 728 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.........||+.|+|||++.+.. ++.++||||+||+++++.+|..||...
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 222334567999999999987643 478999999999999999999998764
No 244
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.87 E-value=3.6e-23 Score=220.01 Aligned_cols=149 Identities=23% Similarity=0.320 Sum_probs=127.4
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||+|+ +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 5677788888886 5679999986542 445678999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~ 172 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--RK 172 (294)
T ss_dssp ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC--CB
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc--cc
Confidence 367889999999999999999999999999999999999999987643222 22
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 3457999999999999888999999999999999999999998764
No 245
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.86 E-value=4.5e-23 Score=228.99 Aligned_cols=143 Identities=26% Similarity=0.344 Sum_probs=112.6
Q ss_pred ccCCcc-ceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhh-cchhhHHH----------------
Q 045449 628 DRFSEN-NLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKR-IRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~-~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~---------------- 677 (823)
++|... ++||.|+ +..||||++... ..+.+|++++.+ .+||||++
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 344443 5788875 567999999643 356788888754 48999987
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeecccccccC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+|||++. ++.+||+|||+++...
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 3678899999999999999999999999997 7899999999998754
Q ss_pred CCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... .....+||+.|+|||++.+..|+.++|||||||++|++++|..||...
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 216 SHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp --------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 322 234567999999999999999999999999999999999999999654
No 246
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.86 E-value=1.2e-23 Score=223.30 Aligned_cols=152 Identities=24% Similarity=0.290 Sum_probs=116.8
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
++|...+.||.|+ +..||||+++... ....+.|.+|++++++++||||++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 97 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence 4566666666654 2258999987542 345578999999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 177 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177 (291)
T ss_dssp EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence 3568899999999999999999999999999999999999999876543321
Q ss_pred -ccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 730 -SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 730 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.......+|+.|+|||++.+..++.++||||+||+++++++ |..||....
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 229 (291)
T 1u46_A 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN 229 (291)
T ss_dssp EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC
Confidence 12234567889999999988889999999999999999999 999987643
No 247
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=3.3e-21 Score=210.19 Aligned_cols=241 Identities=15% Similarity=0.113 Sum_probs=156.8
Q ss_pred cEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCC-CccCCCcccCc-ccc
Q 045449 231 KEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIP-NTIGNLRNLEF-GNI 308 (823)
Q Consensus 231 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L 308 (823)
++++.++|+++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| .+|.++++|.. +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 45777777777 677655 3467778888888775555667777888888888887765444 46777777654 556
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecC-CcceeccCccccCcc-cccEEEc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMAN-CSISGNIPQVVGNLS-NLLVLEL 386 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~L 386 (823)
+.|+++.. .+..|.++++|++|++++|.+++..+..+... ..+..+++.+ |++....+..|..+. .++.|+|
T Consensus 88 ~~N~l~~l-----~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~-~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L 161 (350)
T 4ay9_X 88 KANNLLYI-----NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHS-LQKVLLDIQDNINIHTIERNSFVGLSFESVILWL 161 (350)
T ss_dssp EETTCCEE-----CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCB-SSCEEEEEESCTTCCEECTTSSTTSBSSCEEEEC
T ss_pred cCCccccc-----CchhhhhccccccccccccccccCCchhhccc-chhhhhhhccccccccccccchhhcchhhhhhcc
Confidence 66777765 33467777778888888888776666555554 4666777754 566666666666654 5777788
Q ss_pred ccCcCCCCchhcccccCCCCEEEccC-CCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCC-ccc
Q 045449 387 GGNNLTGPIPVTFSQLQTLQAFDLTR-NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLN-IFT 464 (823)
Q Consensus 387 s~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~ 464 (823)
++|+|+. +|.......+|+.|++++ |.++...+..|.++++|+.|||++|+|+...+..|.+ |+.|.+.++ +++
T Consensus 162 ~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~ 237 (350)
T 4ay9_X 162 NKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLK 237 (350)
T ss_dssp CSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCC
T ss_pred ccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcC
Confidence 8888773 444444456777777764 5555444455777777888888888877444444444 344443333 333
Q ss_pred cccchhhhccCCCcEEecccccc
Q 045449 465 SVLSSTIWNLKDILFIDVSSNFL 487 (823)
Q Consensus 465 ~~~p~~~~~l~~L~~LdLs~N~l 487 (823)
.+| .+..+++|+.++++++.-
T Consensus 238 -~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 238 -KLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp -CCC-CTTTCCSCCEEECSCHHH
T ss_pred -cCC-CchhCcChhhCcCCCCcc
Confidence 344 366777777777776543
No 248
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.86 E-value=3.1e-23 Score=224.91 Aligned_cols=150 Identities=23% Similarity=0.317 Sum_probs=127.9
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||+|+ +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35777788888885 5679999986542 445678999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~ 197 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--R 197 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC--C
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc--c
Confidence 367889999999999999999999999999999999999999987643222 2
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+..++.++|||||||++|++++|..||...
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 23457999999999998888999999999999999999999998764
No 249
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.86 E-value=1.4e-23 Score=226.96 Aligned_cols=151 Identities=26% Similarity=0.316 Sum_probs=127.2
Q ss_pred ccCCccceeeccC----------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN----------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
++|...+.||.|+ +..||||++........+.|.+|++++++++||||++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4566667777664 4669999998776666788999999999999999998
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 182 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCc
Confidence 356889999999999999999999999999999999999999987654332
Q ss_pred c-ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 L-SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. .......||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~ 233 (327)
T 3lxl_A 183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSP 233 (327)
T ss_dssp EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccc
Confidence 1 1223456888999999998888999999999999999999999888654
No 250
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.86 E-value=4.6e-23 Score=226.86 Aligned_cols=147 Identities=28% Similarity=0.345 Sum_probs=123.0
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |..||||++... .....+.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46778888899886 677999999753 2445678999999999999999997
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--- 197 (371)
T 4exu_A 121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 197 (371)
T ss_dssp CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---------
T ss_pred eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---
Confidence 3578999999999999999999999999999999999999999865432
Q ss_pred ccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....+||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 198 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 198 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred --cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 234578999999999877 67899999999999999999999999764
No 251
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.86 E-value=9.2e-24 Score=232.15 Aligned_cols=149 Identities=24% Similarity=0.318 Sum_probs=111.8
Q ss_pred CCccceeeccC---------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 630 FSENNLIGIGN---------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 630 f~~~~~lg~g~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
|...+.||+|+ +..||||++.... ....++|.+|+.++++++||||++
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 45567888886 1247999886432 345678999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc--
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL-- 729 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-- 729 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 250 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccc
Confidence 3568899999999999999999999999999999999999999876433211
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
.......+|+.|+|||++.+..++.++|||||||++|++++ +..||.+.
T Consensus 251 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 11234567889999999998899999999999999999999 56666553
No 252
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.86 E-value=1.5e-23 Score=229.75 Aligned_cols=148 Identities=28% Similarity=0.345 Sum_probs=114.2
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ ++.||||++..... ..+.+.+|+.++++++||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 46788888888886 56799999965432 2356889999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc--EEEeecccccccCCCCccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV--AHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~--~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++. +||+|||+|+...... ..
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---~~ 174 (361)
T 3uc3_A 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QP 174 (361)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC---CC
Confidence 4678999999999999999999999999987665 9999999998543222 22
Q ss_pred cccccCCCcCcccccCCCccccc-cceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTR-GDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~-~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...+||+.|+|||++.+..+..+ +||||+||++|++++|..||...
T Consensus 175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (361)
T 3uc3_A 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221 (361)
T ss_dssp ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence 34579999999999988877655 89999999999999999999764
No 253
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.86 E-value=1.5e-23 Score=226.89 Aligned_cols=153 Identities=27% Similarity=0.350 Sum_probs=117.1
Q ss_pred HHHhccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 624 LRATDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 624 ~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
....++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34457888889999886 6679999996443 333467889999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe-----CCCCcEEEeecccccccCC
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL-----DEDMVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl-----~~~~~~kl~DfGla~~~~~ 725 (823)
++.|++.+|+|+|+.+|+||||||+||++ +.++.+||+|||+|+....
T Consensus 110 lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 110 LIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp EEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred EEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 46789999999999999999999999999 4556699999999987643
Q ss_pred CCccccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... .....+||+.|+|||++.+. .++.++||||+||+++++++|..||...
T Consensus 190 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 190 PIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 322 23445789999999998775 4899999999999999999999998664
No 254
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.86 E-value=7.9e-23 Score=216.20 Aligned_cols=147 Identities=22% Similarity=0.344 Sum_probs=125.5
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5677788888875 56799999965432 22467999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~----~ 169 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----R 169 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC----B
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc----c
Confidence 35788999999999999999999999999999999999999997654322 2
Q ss_pred cccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 215 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP 215 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCC
Confidence 3457999999999999989999999999999999999999999764
No 255
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.86 E-value=1.2e-23 Score=237.72 Aligned_cols=150 Identities=25% Similarity=0.442 Sum_probs=120.0
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||.|+ +..||||+++.... ..++|.+|++++++++||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhc
Confidence 35677778888886 35699999975432 2367999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++++|+|+|+.+|+||||||+|||++.++.+||+|||+++....... .....
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce-ecccC
Confidence 356889999999999999999999999999999999999999987643221 22233
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
..+|+.|+|||++.++.++.++|||||||+++++++ |..||.+.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 457889999999988899999999999999999999 89998764
No 256
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.86 E-value=1.4e-23 Score=222.50 Aligned_cols=142 Identities=22% Similarity=0.273 Sum_probs=119.5
Q ss_pred ccCCccceeeccC------------C-------eEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 628 DRFSENNLIGIGN------------G-------MEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
++|...+.||.|+ + ..||+|++........+.|.+|++++++++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 4677778888876 1 459999997766666688999999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc--------EEEeeccc
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV--------AHISDFGI 719 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~--------~kl~DfGl 719 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++. +||+|||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~ 167 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCS
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcc
Confidence 3578899999999999999999999999988776 99999999
Q ss_pred ccccCCCCccccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCc
Q 045449 720 AKLLSGEDQLSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTV 775 (823)
Q Consensus 720 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~ 775 (823)
++..... ....||+.|+|||++.+ ..++.++||||+||+++++++|..++
T Consensus 168 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 168 SITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp CTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 9765322 23458999999999887 67899999999999999999965444
No 257
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.86 E-value=1e-23 Score=227.67 Aligned_cols=149 Identities=25% Similarity=0.305 Sum_probs=116.9
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHH-HHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYER-ALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++...... ....+.+|++++++++||||++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 4677778888886 567999998754322 2235678999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~--~~~~ 159 (324)
T 3mtl_A 82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--TYDN 159 (324)
T ss_dssp CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc--cccc
Confidence 357899999999999999999999999999999999999999986543221 2334
Q ss_pred cccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 735 TLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 578999999999876 56899999999999999999999999764
No 258
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.86 E-value=1.8e-23 Score=221.62 Aligned_cols=152 Identities=24% Similarity=0.390 Sum_probs=127.7
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
..++|...+.||.|+ +..||||++.... ...+.|.+|++++++++||||++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 346777778888875 5679999997543 23478999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~ 168 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-TA 168 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-EE
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-cc
Confidence 356889999999999999999999999999999999999999987654332 22
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.....+|+.|+|||++.+..++.++||||+||+++++++ |..||....
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~ 217 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 344567889999999988899999999999999999999 888887643
No 259
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.86 E-value=2e-23 Score=222.13 Aligned_cols=150 Identities=23% Similarity=0.263 Sum_probs=124.8
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ ++.||||++..... .+++.+|++++++++|++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788888888875 67799999864432 246889999999999887665
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC---CCCcEEEeecccccccCCCCcc-
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD---EDMVAHISDFGIAKLLSGEDQL- 729 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~---~~~~~kl~DfGla~~~~~~~~~- 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++ .++.+||+|||+++........
T Consensus 86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 86 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred ecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 467899999999999999999999999994 7889999999999876543321
Q ss_pred ----ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 ----SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.......||+.|+|||++.+..++.++|||||||+++++++|+.||...
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence 1124567999999999999999999999999999999999999999764
No 260
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.86 E-value=3.4e-23 Score=224.51 Aligned_cols=151 Identities=28% Similarity=0.381 Sum_probs=126.0
Q ss_pred ccCCccceeeccC-------------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH---------
Q 045449 628 DRFSENNLIGIGN-------------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK--------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-------------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~--------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|+++++++ +||||++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 5777778888875 2358999997543 45567899999999999 8999997
Q ss_pred -----------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC
Q 045449 678 -----------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 678 -----------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~ 710 (823)
++.|++++|+|+|+.+|+||||||+||+++.++
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 194 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN 194 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCC
Confidence 135788899999999999999999999999999
Q ss_pred cEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 711 VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 711 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
.+||+|||+++...............+|+.|+|||++.+..++.++||||+||+++++++ |..||.+.
T Consensus 195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 999999999987654433333344567889999999988889999999999999999998 99998764
No 261
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.86 E-value=4.8e-23 Score=222.31 Aligned_cols=141 Identities=26% Similarity=0.380 Sum_probs=100.9
Q ss_pred cceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc-hhhHHH----------------------
Q 045449 633 NNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR-HRNLVK---------------------- 677 (823)
Q Consensus 633 ~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~---------------------- 677 (823)
.+.||+|+ ++.||||++.... ...+.+|++++.++. ||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 35677775 6779999997653 256788999999997 999998
Q ss_pred ------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC---cEEEeecccccccCCCCccccccccc
Q 045449 678 ------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM---VAHISDFGIAKLLSGEDQLSKQTQTL 736 (823)
Q Consensus 678 ------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~---~~kl~DfGla~~~~~~~~~~~~~~~~ 736 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||+++....... .....+
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~ 170 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPC 170 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cccccC
Confidence 467899999999999999999999999997655 899999999987543322 234467
Q ss_pred cCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 737 ATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 737 gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
||+.|+|||++.+..++.++||||+||++|++++|..||...
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 212 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 899999999999999999999999999999999999999753
No 262
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.86 E-value=5.1e-23 Score=224.91 Aligned_cols=152 Identities=28% Similarity=0.338 Sum_probs=124.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ |..||||++... ......++.+|++++++++||||++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46788888899886 677999998643 2445568899999999999999986
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL- 729 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 169 (353)
T 2b9h_A 90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169 (353)
T ss_dssp EEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred EEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence 3678899999999999999999999999999999999999999876432211
Q ss_pred -------ccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 -------SKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 -------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
......+||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 01223578999999998654 67899999999999999999999998764
No 263
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.86 E-value=9.7e-23 Score=216.22 Aligned_cols=144 Identities=28% Similarity=0.364 Sum_probs=120.8
Q ss_pred CCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 630 FSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 630 f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
|...+.||.|+ +..||+|++.... ....+.+.+|++++++++||||++
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 55566788876 5569999986543 455678999999999999999997
Q ss_pred --------------------------HHHHHHHHhhhcCCCC--EEeccCCCCCEEeC-CCCcEEEeecccccccCCCCc
Q 045449 678 --------------------------IISSSLEYLHFGHSIP--IIHCDLKPSNVLLD-EDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~--ivHrdlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+ |+||||||+||+++ .++.+||+|||+++......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 186 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF- 186 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS-
T ss_pred EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc-
Confidence 3578899999999999 99999999999998 78999999999997654322
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++. +.++.++||||+||+++++++|..||.+.
T Consensus 187 ---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 232 (290)
T 1t4h_A 187 ---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp ---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence 23457999999999876 46899999999999999999999999764
No 264
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.86 E-value=3.7e-23 Score=219.11 Aligned_cols=139 Identities=23% Similarity=0.339 Sum_probs=117.4
Q ss_pred CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------------------------------HH
Q 045449 641 GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----------------------------------------II 679 (823)
Q Consensus 641 ~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----------------------------------------~~ 679 (823)
+..||||++.... ....+.+.+|++++++++||||++ ++
T Consensus 37 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 116 (287)
T 1u59_A 37 QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 116 (287)
T ss_dssp CEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHH
T ss_pred cceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHH
Confidence 4569999997542 455678999999999999999998 36
Q ss_pred HHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-ccccccccCCCcCcccccCCCccccccce
Q 045449 680 SSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL-SKQTQTLATIGYMAPEYGTKGRVSTRGDV 758 (823)
Q Consensus 680 ~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 758 (823)
.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.++||
T Consensus 117 ~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 196 (287)
T 1u59_A 117 HQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196 (287)
T ss_dssp HHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHH
T ss_pred HHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhH
Confidence 78899999999999999999999999999999999999999876543321 12233457899999999988889999999
Q ss_pred ehhhhhhccccC-CCCCcCCCc
Q 045449 759 CSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 759 ~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
||+||+++++++ |..||....
T Consensus 197 ~slG~il~ellt~g~~p~~~~~ 218 (287)
T 1u59_A 197 WSYGVTMWEALSYGQKPYKKMK 218 (287)
T ss_dssp HHHHHHHHHHHTTSCCTTTTCC
T ss_pred HHHHHHHHHHHcCCCCCcccCC
Confidence 999999999998 999997643
No 265
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.86 E-value=3.1e-23 Score=218.72 Aligned_cols=149 Identities=26% Similarity=0.411 Sum_probs=125.1
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
++|...+.||.|+ +..||||++..... ..+.|.+|++++++++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN 91 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCC
Confidence 5677778888875 45799999875432 2467999999999999999998
Q ss_pred ----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccccc
Q 045449 678 ----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQT 735 (823)
Q Consensus 678 ----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 735 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ......
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~ 170 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGA 170 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-ECCTTC
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-ccccCC
Confidence 367889999999999999999999999999999999999999987654322 222344
Q ss_pred ccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 736 LATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 736 ~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
.+++.|+|||++.++.++.++||||+||+++++++ |..||.+.
T Consensus 171 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 214 (279)
T 1qpc_A 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214 (279)
T ss_dssp CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc
Confidence 57889999999988889999999999999999999 88898764
No 266
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.86 E-value=4.9e-23 Score=230.88 Aligned_cols=146 Identities=27% Similarity=0.324 Sum_probs=122.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc------hhhHHH-----------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR------HRNLVK----------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~----------- 677 (823)
..+|...+.||.|+ +..||||++.... ...+.+.+|++++..++ |+||++
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 35688889999986 5779999997543 34467888998888874 457765
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc--EEEeecccccccCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV--AHISDFGIAKLLSG 725 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~--~kl~DfGla~~~~~ 725 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++. +||+|||+|+....
T Consensus 175 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 175 CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 4678899999999999999999999999998877 99999999976432
Q ss_pred CCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. ....+||+.|+|||++.+..|+.++|||||||++|++++|..||.+.
T Consensus 255 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 255 R-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp C-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 2 23467999999999999999999999999999999999999998664
No 267
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.86 E-value=7.8e-23 Score=223.51 Aligned_cols=147 Identities=28% Similarity=0.345 Sum_probs=122.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |..||||++... .....+.+.+|+.++++++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35677788888886 677999998643 2445578999999999999999997
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--- 179 (353)
T 3coi_A 103 DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 179 (353)
T ss_dssp CCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred eEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---
Confidence 3678999999999999999999999999999999999999999865322
Q ss_pred ccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+ ..++.++||||+||+++++++|..||.+.
T Consensus 180 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 180 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred --ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 234578999999998876 67899999999999999999999998764
No 268
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.86 E-value=1.1e-22 Score=223.31 Aligned_cols=155 Identities=28% Similarity=0.394 Sum_probs=129.2
Q ss_pred HHHHHHhccCCccceeeccC------------CeEEEEEEehHhh--------HHHHHHHHHHHHHHhhc-chhhHHH--
Q 045449 621 HELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQY--------ERALKSFEDECEVRKRI-RHRNLVK-- 677 (823)
Q Consensus 621 ~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~-- 677 (823)
.......++|...+.||.|+ |..||||++.... ....+.+.+|++++.++ +||||++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 33445567888889999885 6789999985432 33456789999999999 7999998
Q ss_pred --------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccc
Q 045449 678 --------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGI 719 (823)
Q Consensus 678 --------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGl 719 (823)
++.|++.+|+|+|+.||+||||||+||+++.++.+||+|||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 467889999999999999999999999999999999999999
Q ss_pred ccccCCCCccccccccccCCCcCcccccCC------CccccccceehhhhhhccccCCCCCcCCC
Q 045449 720 AKLLSGEDQLSKQTQTLATIGYMAPEYGTK------GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 720 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
++....... .....||+.|+|||++.+ ..++.++|||||||++|++++|..||...
T Consensus 247 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 308 (365)
T 2y7j_A 247 SCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308 (365)
T ss_dssp CEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC
Confidence 987654332 234679999999998753 35889999999999999999999999764
No 269
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.86 E-value=8.4e-24 Score=229.70 Aligned_cols=146 Identities=27% Similarity=0.413 Sum_probs=121.8
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH---------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK--------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~--------------- 677 (823)
..++|...+.||.|+ +..||||++.... ..+.+|++++.++ +||||++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 356788889999886 6679999997543 2356788888888 7999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC----CcEEEeecccccccCCCCc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED----MVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~----~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++++|+|+|+.||+||||||+||++..+ +.+||+|||+++.......
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 46789999999999999999999999998532 3599999999987654322
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
.....+||+.|+|||++.+..|+.++||||+||++|++++|..||..
T Consensus 176 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 176 --LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp --CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred --ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 23456799999999999888899999999999999999999999975
No 270
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.86 E-value=3e-23 Score=217.49 Aligned_cols=145 Identities=22% Similarity=0.313 Sum_probs=122.0
Q ss_pred ccCCccceeeccC----------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN----------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
++|...+.||.|+ +..||||++.... ....+.|.+|++++++++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 5677778888886 6679999997542 445578999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCC--EEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc
Q 045449 678 --------------------------IISSSLEYLHFGHSIP--IIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~--ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+ |+||||||+||+++.++.++++|||++.....
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~---- 165 (271)
T 3kmu_A 90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS---- 165 (271)
T ss_dssp CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC----
T ss_pred ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc----
Confidence 3678899999999999 99999999999999999999999998765322
Q ss_pred ccccccccCCCcCcccccCCCcccc---ccceehhhhhhccccCCCCCcCCCc
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVST---RGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
....||+.|+|||++.+..++. ++||||+||++|++++|..||.+..
T Consensus 166 ---~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 215 (271)
T 3kmu_A 166 ---PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215 (271)
T ss_dssp ---TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred ---cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 2356899999999988765544 7999999999999999999997653
No 271
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.86 E-value=4.3e-23 Score=223.56 Aligned_cols=150 Identities=23% Similarity=0.414 Sum_probs=116.0
Q ss_pred cCCccceeeccC----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 629 RFSENNLIGIGN----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 629 ~f~~~~~lg~g~----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
+|...+.||.|+ +..||||++.... ......|.+|++++++++||||++
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 344467889886 1239999997543 444568999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL- 729 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 729 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 3578899999999999999999999999999999999999999876533221
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
.......+|+.|+|||++.+..++.++|||||||+++++++ |..||.+.
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 254 (333)
T 1mqb_A 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254 (333)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence 11223456889999999988899999999999999999998 99998654
No 272
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.86 E-value=2.6e-23 Score=222.21 Aligned_cols=148 Identities=30% Similarity=0.385 Sum_probs=123.2
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ |+.||||++........+.+.+|++++++++||||++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 35677788888875 6679999997655444567999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe---CCCCcEEEeecccccccCCCCcccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl---~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+||++ +.++.+||+|||+++..... .
T Consensus 88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~----~ 163 (304)
T 2jam_A 88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----I 163 (304)
T ss_dssp CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB----T
T ss_pred CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC----c
Confidence 35788999999999999999999999999 77889999999999764322 1
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+..++.++||||+||+++++++|..||.+.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 23456999999999999999999999999999999999999998764
No 273
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.86 E-value=2.3e-23 Score=231.34 Aligned_cols=147 Identities=25% Similarity=0.393 Sum_probs=124.3
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 5677888899886 6679999997543 233467889999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe----CCCCcEEEeecccccccCC
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL----DEDMVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl----~~~~~~kl~DfGla~~~~~ 725 (823)
++.|++.+|+|+|+.+|+||||||+||++ +.++.+||+|||+|+....
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 35788999999999999999999999999 7788899999999987654
Q ss_pred CCccccccccccCCCcCcccccCC--------CccccccceehhhhhhccccCCCCCcCC
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTK--------GRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
... .....||+.|+|||++.+ ..++.++|||||||++|++++|..||..
T Consensus 169 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 169 DEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp GGG---SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred CCc---cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 322 234679999999998765 5688999999999999999999999964
No 274
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.86 E-value=3.3e-23 Score=218.38 Aligned_cols=146 Identities=30% Similarity=0.395 Sum_probs=118.0
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
.++|...+.||.|+ |..||||++.... ..+.|.+|++++++++||||++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 35777788888886 6779999997543 3467999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-----~ 172 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----D 172 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc-----c
Confidence 35688889999999999999999999999999999999999998654321 2
Q ss_pred ccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 734 QTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
...+++.|+|||++.+..++.++||||+||+++++++ |..||....
T Consensus 173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 219 (278)
T 1byg_A 173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219 (278)
T ss_dssp ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 3457899999999988889999999999999999997 999987653
No 275
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.86 E-value=5.1e-23 Score=235.00 Aligned_cols=148 Identities=28% Similarity=0.408 Sum_probs=123.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH--HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE--RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788889999886 56799999965432 23467899999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC---CCCcEEEeecccccccCCCCcc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD---EDMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~---~~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+|||++ .++.+||+|||+|+......
T Consensus 101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-- 178 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178 (486)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--
Confidence 467899999999999999999999999995 45689999999998764432
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....+||+.|+|||++.+ .|+.++||||+||++|++++|..||.+.
T Consensus 179 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 225 (486)
T 3mwu_A 179 -KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2334679999999999865 5999999999999999999999999764
No 276
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.86 E-value=1.2e-23 Score=240.09 Aligned_cols=149 Identities=30% Similarity=0.437 Sum_probs=125.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 35788888899886 6679999986432 233467999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe---CCCCcEEEeecccccccCCCCc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl---~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+.+|+||||||+|||+ +.++.+||+|||+|+.......
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 46789999999999999999999999999 4678999999999987654332
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
....+||+.|+|||++.+ .|+.++||||+||++|++++|..||.+..
T Consensus 185 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 185 ---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp ---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 234579999999999865 69999999999999999999999997653
No 277
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.86 E-value=2.2e-23 Score=244.41 Aligned_cols=138 Identities=24% Similarity=0.318 Sum_probs=112.9
Q ss_pred eEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------------------------------HHH
Q 045449 642 MEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK---------------------------------------IIS 680 (823)
Q Consensus 642 ~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~---------------------------------------~~~ 680 (823)
..||||+++... ....++|.+|++++++++|||||+ ++.
T Consensus 397 ~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~ 476 (635)
T 4fl3_A 397 KTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVH 476 (635)
T ss_dssp EEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHH
T ss_pred eEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHH
Confidence 569999997543 234578999999999999999998 467
Q ss_pred HHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc-cccccccccCCCcCcccccCCCcccccccee
Q 045449 681 SSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ-LSKQTQTLATIGYMAPEYGTKGRVSTRGDVC 759 (823)
Q Consensus 681 ~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 759 (823)
|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+....... ........+|+.|+|||++.+..++.++|||
T Consensus 477 qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvw 556 (635)
T 4fl3_A 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556 (635)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHH
Confidence 899999999999999999999999999999999999999987654332 1222334578899999999988999999999
Q ss_pred hhhhhhccccC-CCCCcCCCc
Q 045449 760 SFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 760 S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
||||++|++++ |..||.+..
T Consensus 557 SlGv~l~ellt~G~~Pf~~~~ 577 (635)
T 4fl3_A 557 SFGVLMWEAFSYGQKPYRGMK 577 (635)
T ss_dssp HHHHHHHHHHTTTCCSSTTCC
T ss_pred HHHHHHHHHHhCCCCCCCCCC
Confidence 99999999998 999997753
No 278
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.86 E-value=7e-23 Score=221.57 Aligned_cols=144 Identities=22% Similarity=0.339 Sum_probs=122.7
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc-hhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR-HRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++.... .+.+.+|++++++++ ||||++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5677888899886 5679999997543 257899999999997 999997
Q ss_pred ----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC-cEEEeecccccccCCCCccccccc
Q 045449 678 ----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM-VAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 ----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~-~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||+|+....... ...
T Consensus 113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~ 189 (330)
T 3nsz_A 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNV 189 (330)
T ss_dssp ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCS
T ss_pred eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---ccc
Confidence 467899999999999999999999999999776 899999999987654332 234
Q ss_pred cccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCC
Q 045449 735 TLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
..||+.|+|||++.+ ..++.++||||+||+++++++|..||..
T Consensus 190 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 578999999999877 6689999999999999999999999844
No 279
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.86 E-value=2.7e-23 Score=235.29 Aligned_cols=151 Identities=21% Similarity=0.241 Sum_probs=123.7
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++..... .+++.+|++++..++|++.+.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 35788888888875 56799998764432 245888999999998754443
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe---CCCCcEEEeecccccccCCCCcc-
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGEDQL- 729 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl---~~~~~~kl~DfGla~~~~~~~~~- 729 (823)
++.|++.+|+|+|+.+|+||||||+|||+ +.++.+||+|||+++........
T Consensus 84 ~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 46789999999999999999999999999 57889999999999876543321
Q ss_pred ----ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 730 ----SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 730 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.......||+.|+|||++.+..++.++|||||||++|++++|..||.+..
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 12235679999999999999999999999999999999999999998753
No 280
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.86 E-value=2.6e-23 Score=220.04 Aligned_cols=148 Identities=30% Similarity=0.453 Sum_probs=119.5
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 5677788899886 5678999987554 223478999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe---CCCCcEEEeecccccccCCCC
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL---DEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl---~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++.+|+|+|+.+|+||||||+||++ +.++.+||+|||+++......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 35688899999999999999999999999 456789999999998764332
Q ss_pred ccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 728 QLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 728 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
. .....||+.|+|||++. +.++.++||||+||+++++++|..||.+..
T Consensus 182 ~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~ 229 (285)
T 3is5_A 182 H---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence 2 23457999999999875 568999999999999999999999997653
No 281
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.86 E-value=6.2e-23 Score=219.21 Aligned_cols=150 Identities=27% Similarity=0.361 Sum_probs=127.4
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.+.|...+.||.|+ +..||||++.... ....+.+.+|+.++++++||||++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35677778888875 5679999986443 334578999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~ 178 (303)
T 3a7i_A 101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNT 178 (303)
T ss_dssp CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--CBCC
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc--ccCc
Confidence 467889999999999999999999999999999999999999987653321 2234
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
..||+.|+|||++.+..++.++|||||||+++++++|..||...
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 222 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence 57999999999999999999999999999999999999998764
No 282
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.86 E-value=2.1e-23 Score=221.56 Aligned_cols=153 Identities=24% Similarity=0.317 Sum_probs=122.7
Q ss_pred hccCCccc-eeeccC--------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 627 TDRFSENN-LIGIGN--------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 627 t~~f~~~~-~lg~g~--------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
.++|...+ .||.|+ +..||||++.... ....++|.+|++++++++||||++
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l 94 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML 94 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence 34566555 788775 3569999987543 234578999999999999999998
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL- 729 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~- 729 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 3678899999999999999999999999999999999999999876543321
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.......+|+.|+|||++.+..++.++||||+||+++++++ |..||.+..
T Consensus 175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 225 (291)
T 1xbb_A 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225 (291)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 11223456789999999988889999999999999999998 999997653
No 283
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.86 E-value=2.9e-23 Score=226.77 Aligned_cols=146 Identities=13% Similarity=0.154 Sum_probs=121.4
Q ss_pred ccCCccceeeccC--------------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH----------
Q 045449 628 DRFSENNLIGIGN--------------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK---------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~--------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 677 (823)
++|...+.||.|+ +..||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 5677777777764 356999998754 46889999999999999996
Q ss_pred -----------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC
Q 045449 678 -----------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 678 -----------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~ 710 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED 196 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred cCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence 256888999999999999999999999999988
Q ss_pred --cEEEeecccccccCCCCcc-----ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 711 --VAHISDFGIAKLLSGEDQL-----SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 711 --~~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|++++|..||...
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 9999999999876433211 1123457999999999999989999999999999999999999999764
No 284
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.86 E-value=5e-23 Score=235.47 Aligned_cols=149 Identities=28% Similarity=0.423 Sum_probs=122.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+.+.+|++++++++|||||+
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45677888899886 5668999987543 223467899999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeecccccccCCCCcc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFGIAKLLSGEDQL 729 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfGla~~~~~~~~~ 729 (823)
++.|++.+|+|+|+.+|+||||||+|||++. ++.+||+|||+|+......
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-- 193 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-- 193 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB--
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc--
Confidence 3678899999999999999999999999975 4569999999998765432
Q ss_pred ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 730 SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 730 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.....+||+.|+|||++. +.|+.++||||+||++|++++|..||.+..
T Consensus 194 -~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 241 (494)
T 3lij_A 194 -KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT 241 (494)
T ss_dssp -CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 234567999999999876 569999999999999999999999997643
No 285
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.86 E-value=3.8e-23 Score=219.79 Aligned_cols=148 Identities=29% Similarity=0.414 Sum_probs=119.7
Q ss_pred cCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 629 RFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 629 ~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
+|....+||.|+ +..||||++........+.+.+|+.++++++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 344455788775 5679999997665555678999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC-CCcEEEeecccccccCCCCccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE-DMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~-~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~--~~ 180 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CT 180 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC--cc
Confidence 2468899999999999999999999999987 89999999999987643221 12
Q ss_pred cccccCCCcCcccccCCCc--cccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGR--VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~--~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++.+.. ++.++|||||||+++++++|..||.+.
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 3457999999999987654 789999999999999999999998654
No 286
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.86 E-value=4e-23 Score=229.10 Aligned_cols=144 Identities=28% Similarity=0.355 Sum_probs=119.6
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
.+|...+.||.|+ +..||||++.... +...+|++++++++||||++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 4678888999886 3448888775432 22347999999999999997
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC-CCCcEEEeecccccccCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD-EDMVAHISDFGIAKLLSGE 726 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~-~~~~~kl~DfGla~~~~~~ 726 (823)
++.|++.+|+|+|+.+|+||||||+|||++ .++.+||+|||+|+.....
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~ 195 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence 356889999999999999999999999999 7899999999999876443
Q ss_pred CccccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 727 DQLSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 727 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.. ....+||+.|+|||++.+. .|+.++||||+||++|++++|..||.+.
T Consensus 196 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 245 (394)
T 4e7w_A 196 EP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245 (394)
T ss_dssp CC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 32 2346789999999998765 5899999999999999999999999764
No 287
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.85 E-value=4.7e-23 Score=218.52 Aligned_cols=148 Identities=26% Similarity=0.281 Sum_probs=109.8
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ ++.||||++.... ....+.+.+|...++.++||||++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 36778888888886 6679999997542 233344555666688889999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 ----------------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred ehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 357889999999997 999999999999999999999999999987643322
Q ss_pred cccccccccCCCcCccccc----CCCccccccceehhhhhhccccCCCCCcCC
Q 045449 729 LSKQTQTLATIGYMAPEYG----TKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
.....||+.|+|||++ .+..++.++||||+||+++++++|..||..
T Consensus 166 ---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 166 ---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 2334699999999995 556789999999999999999999999975
No 288
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.6e-23 Score=243.22 Aligned_cols=138 Identities=22% Similarity=0.337 Sum_probs=111.8
Q ss_pred eEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------------------------------HHH
Q 045449 642 MEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK----------------------------------------IIS 680 (823)
Q Consensus 642 ~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~----------------------------------------~~~ 680 (823)
..||||+++... ....++|.+|++++++++|||||+ ++.
T Consensus 364 ~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~ 443 (613)
T 2ozo_A 364 IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH 443 (613)
T ss_dssp EEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHH
T ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHH
Confidence 459999997543 234578999999999999999998 367
Q ss_pred HHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-ccccccccCCCcCcccccCCCcccccccee
Q 045449 681 SSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL-SKQTQTLATIGYMAPEYGTKGRVSTRGDVC 759 (823)
Q Consensus 681 ~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 759 (823)
|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+|+........ .......+|+.|+|||++.+..++.++|||
T Consensus 444 qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvw 523 (613)
T 2ozo_A 444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW 523 (613)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHH
Confidence 8899999999999999999999999999999999999999876433221 112233467899999999988999999999
Q ss_pred hhhhhhccccC-CCCCcCCCc
Q 045449 760 SFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 760 S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
||||++|++++ |..||.+..
T Consensus 524 SlGv~l~ellt~G~~Pf~~~~ 544 (613)
T 2ozo_A 524 SYGVTMWEALSYGQKPYKKMK 544 (613)
T ss_dssp HHHHHHHHHHTTSCCTTTTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCC
Confidence 99999999997 999997653
No 289
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.85 E-value=2.8e-23 Score=239.38 Aligned_cols=150 Identities=25% Similarity=0.446 Sum_probs=125.5
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||+|+ +..||||+++.... ..++|.+|++++++++||||++
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~ 344 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 344 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhc
Confidence 45677778899886 35699999975432 2367999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++++|+|+|+.+|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~ 423 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQG 423 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHTTCS
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eecccC
Confidence 35688999999999999999999999999999999999999998764321 112233
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
..++..|+|||++.++.++.++|||||||++|++++ |..||.+.
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 457889999999988899999999999999999999 89998764
No 290
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.85 E-value=5.5e-23 Score=221.23 Aligned_cols=148 Identities=25% Similarity=0.341 Sum_probs=123.3
Q ss_pred CccceeeccC----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 631 SENNLIGIGN----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 631 ~~~~~lg~g~----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
...+.||.|+ ++.||||++.... ....+.|.+|++++++++||||++
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 5566777765 4569999997543 445678999999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcc-cc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQL-SK 731 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~-~~ 731 (823)
++.|++.+|.|+|+.+|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 114 ~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 193 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 193 (318)
T ss_dssp ECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC
T ss_pred EecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccccccccc
Confidence 3678899999999999999999999999999999999999999877543321 12
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 194 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~ 240 (318)
T 3lxp_A 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240 (318)
T ss_dssp ---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred ccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence 33456888999999999889999999999999999999999998654
No 291
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.85 E-value=3.9e-23 Score=220.60 Aligned_cols=150 Identities=23% Similarity=0.328 Sum_probs=122.2
Q ss_pred ccCCccceeeccC----------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH-------------
Q 045449 628 DRFSENNLIGIGN----------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~------------- 677 (823)
++|...+.||.|+ +..||||++.... ....+.+.+|++++++++||||++
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3456666777664 5679999997543 233478999999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 35688999999999999999999999999999999999999998765443
Q ss_pred cc-ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 728 QL-SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 728 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
.. .......||..|+|||++.+..++.++||||+||+++++++|..|+..
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 231 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSS 231 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcc
Confidence 21 223345688899999999888999999999999999999999887644
No 292
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.85 E-value=6.5e-23 Score=224.71 Aligned_cols=154 Identities=27% Similarity=0.325 Sum_probs=120.6
Q ss_pred HHHHHHhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------
Q 045449 621 HELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------- 677 (823)
Q Consensus 621 ~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------- 677 (823)
.+.....++|...+.||.|+ +..||||++.... .....+.+|++.+++++||||++
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 55667788999999999886 6679999885432 22245677888889999999987
Q ss_pred ---------------------------------------HHHHHHHHhhhcC--CCCEEeccCCCCCEEeCC-CCcEEEe
Q 045449 678 ---------------------------------------IISSSLEYLHFGH--SIPIIHCDLKPSNVLLDE-DMVAHIS 715 (823)
Q Consensus 678 ---------------------------------------~~~~~l~~L~~~h--~~~ivHrdlk~~NiLl~~-~~~~kl~ 715 (823)
++.|++.+|+|+| +.+|+||||||+|||++. ++.+||+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence 2457788888888 999999999999999996 8999999
Q ss_pred ecccccccCCCCccccccccccCCCcCcccccCCCc-cccccceehhhhhhccccCCCCCcCCC
Q 045449 716 DFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGR-VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 716 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|++++|..||.+.
T Consensus 175 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 175 DFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp CCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 9999987654332 23457899999999986654 899999999999999999999999764
No 293
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.85 E-value=1e-23 Score=227.76 Aligned_cols=161 Identities=25% Similarity=0.339 Sum_probs=122.8
Q ss_pred ccccCHHHHHHHhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH----
Q 045449 615 IRRFSYHELLRATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK---- 677 (823)
Q Consensus 615 ~~~~~~~~l~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~---- 677 (823)
.+.+++.++....++|...+.||.|+ +..||||++.... ...+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp -----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred chhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 34455566666788999999999886 5679999986432 2236788999999999 8999987
Q ss_pred --------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEE
Q 045449 678 --------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAH 713 (823)
Q Consensus 678 --------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~k 713 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+|
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEE
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEE
Confidence 356889999999999999999999999999999999
Q ss_pred EeecccccccCCCCccccccccccCCCcCcccccC-----CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 714 ISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGT-----KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 714 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
|+|||+++....... ......||+.|+|||++. ...++.++|||||||+++++++|..||.+.
T Consensus 170 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred EeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 999999987543211 223457999999999986 566899999999999999999999998764
No 294
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.85 E-value=6.9e-23 Score=226.52 Aligned_cols=148 Identities=26% Similarity=0.347 Sum_probs=121.0
Q ss_pred HHHhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 624 LRATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 624 ~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
....++|...+.||.|+ |..||||++.... +...+|++++++++|||||+
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567888899999986 5679999886442 23457999999999999863
Q ss_pred -------------------------------------------------------------------HHHHHHHHhhhcC
Q 045449 678 -------------------------------------------------------------------IISSSLEYLHFGH 690 (823)
Q Consensus 678 -------------------------------------------------------------------~~~~~l~~L~~~h 690 (823)
++.|++.+|+|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp -------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2468899999999
Q ss_pred CCCEEeccCCCCCEEeC-CCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCC-ccccccceehhhhhhccc
Q 045449 691 SIPIIHCDLKPSNVLLD-EDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGK 768 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~ 768 (823)
+.||+||||||+||+++ .++.+||+|||+|+....... .....||+.|+|||++.+. .++.++||||+||+++++
T Consensus 159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 99999999999999997 688999999999987644332 2345789999999988765 489999999999999999
Q ss_pred cCCCCCcCCC
Q 045449 769 ETRSMTVGET 778 (823)
Q Consensus 769 ~~~~~~~~~~ 778 (823)
++|..||.+.
T Consensus 236 l~g~~pf~~~ 245 (383)
T 3eb0_A 236 ILGKPLFSGE 245 (383)
T ss_dssp HHSSCSSCCS
T ss_pred HhCCCCCCCC
Confidence 9999999764
No 295
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.85 E-value=1.1e-22 Score=233.32 Aligned_cols=149 Identities=26% Similarity=0.367 Sum_probs=123.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH-------------HHHHHHHHHHHHHhhcchhhHHH----
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE-------------RALKSFEDECEVRKRIRHRNLVK---- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~---- 677 (823)
.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++||||++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 57788889999886 56799999864321 23467899999999999999998
Q ss_pred ------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC---cEEEeecc
Q 045449 678 ------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM---VAHISDFG 718 (823)
Q Consensus 678 ------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~---~~kl~DfG 718 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 194 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG 194 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCT
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECC
Confidence 467899999999999999999999999998765 69999999
Q ss_pred cccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 719 IAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 719 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
+|+....... ....+||+.|+|||++. +.|+.++||||+||++|++++|..||.+..
T Consensus 195 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 195 LSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp TCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9987654322 34467999999999976 569999999999999999999999997653
No 296
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.85 E-value=4.9e-23 Score=229.52 Aligned_cols=136 Identities=24% Similarity=0.301 Sum_probs=106.4
Q ss_pred CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------------------------------
Q 045449 641 GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------------------------------- 677 (823)
Q Consensus 641 ~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------------------------------- 677 (823)
+..||||++.... ..+.+.+|++++++++|||||+
T Consensus 48 ~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l 125 (405)
T 3rgf_A 48 DKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 125 (405)
T ss_dssp CCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------C
T ss_pred CeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCC
Confidence 4569999986442 1246889999999999999997
Q ss_pred -------HHHHHHHHhhhcCCCCEEeccCCCCCEEe----CCCCcEEEeecccccccCCCCc-cccccccccCCCcCccc
Q 045449 678 -------IISSSLEYLHFGHSIPIIHCDLKPSNVLL----DEDMVAHISDFGIAKLLSGEDQ-LSKQTQTLATIGYMAPE 745 (823)
Q Consensus 678 -------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl----~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE 745 (823)
++.|++.+|+|+|+.+|+||||||+|||+ +.++.+||+|||+|+....... .......+||+.|+|||
T Consensus 126 ~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE 205 (405)
T 3rgf_A 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCch
Confidence 24588999999999999999999999999 6778999999999987643221 12234567999999999
Q ss_pred ccCCC-ccccccceehhhhhhccccCCCCCcCCC
Q 045449 746 YGTKG-RVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 746 ~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
++.+. .++.++||||+||++|++++|..||...
T Consensus 206 ~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp HHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred hhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 98874 4899999999999999999999999654
No 297
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=2.3e-21 Score=194.89 Aligned_cols=177 Identities=22% Similarity=0.220 Sum_probs=144.6
Q ss_pred eEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccC
Q 045449 333 KVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTR 412 (823)
Q Consensus 333 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 412 (823)
+.++.+++.++. +|..+ +.+|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~~-~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSS-CCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccC-CCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 355666666653 34333 25788888888888877777788889999999999999876667788889999999999
Q ss_pred CCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccC
Q 045449 413 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLS 492 (823)
Q Consensus 413 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 492 (823)
|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-- 163 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-- 163 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC--
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC--
Confidence 999877777788889999999999999877777788899999999999999987777788899999999999988754
Q ss_pred ccccCCCCCcEEEcccCCCCCCCCCccc
Q 045449 493 LDIGNLKVVIGLDFSRNNLSGDIPITIG 520 (823)
Q Consensus 493 ~~~~~l~~L~~L~ls~N~l~g~ip~~~~ 520 (823)
++.|++|+++.|+++|.||..++
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTS
T ss_pred -----CCCHHHHHHHHHhCCceeeccCc
Confidence 45788899999999988888774
No 298
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.85 E-value=1.2e-22 Score=226.65 Aligned_cols=146 Identities=15% Similarity=0.199 Sum_probs=117.8
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcch-hh----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRH-RN---------------- 674 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~n---------------- 674 (823)
+..|...++||+|+ |..||||++.... ....+.|.+|+.+++.++| +|
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 44577778899886 6779999987322 2335678999999988876 11
Q ss_pred --------------------------------------------------------HHHHHHHHHHHhhhcCCCCEEecc
Q 045449 675 --------------------------------------------------------LVKIISSSLEYLHFGHSIPIIHCD 698 (823)
Q Consensus 675 --------------------------------------------------------iv~~~~~~l~~L~~~h~~~ivHrd 698 (823)
+..++.|++++|+|+|+.+|+|||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD 236 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236 (413)
T ss_dssp EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 111347899999999999999999
Q ss_pred CCCCCEEeCCCCcEEEeecccccccCCCCccccccccccCCCcCccccc----------CCCccccccceehhhhhhccc
Q 045449 699 LKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYG----------TKGRVSTRGDVCSFGIISGGK 768 (823)
Q Consensus 699 lk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~S~Gvv~~~~ 768 (823)
|||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..|+.++|||||||++|++
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred cccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999999865322 334567 999999998 566689999999999999999
Q ss_pred cCCCCCcCCC
Q 045449 769 ETRSMTVGET 778 (823)
Q Consensus 769 ~~~~~~~~~~ 778 (823)
++|+.||...
T Consensus 311 ltg~~Pf~~~ 320 (413)
T 3dzo_A 311 WCADLPNTDD 320 (413)
T ss_dssp HHSSCCCCTT
T ss_pred HHCCCCCCCc
Confidence 9999999764
No 299
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.85 E-value=1.1e-22 Score=216.65 Aligned_cols=149 Identities=30% Similarity=0.396 Sum_probs=121.9
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH--HHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE--RALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ |..||||++..... ...+.+.+|++++++++||||++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 4677777888775 67799999875432 22367889999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++.+|+|+|+.||+||||||+||+++.++.+||+|||+++....... ..
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~ 160 (299)
T 2r3i_A 83 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TY 160 (299)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB--CT
T ss_pred cccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc--cc
Confidence 356889999999999999999999999999999999999999987643322 22
Q ss_pred cccccCCCcCcccccCCCc-cccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGR-VSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~-~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++.+.. ++.++||||+||+++++++|..||.+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 3457899999999987765 799999999999999999999999764
No 300
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.85 E-value=9.3e-23 Score=219.36 Aligned_cols=152 Identities=26% Similarity=0.381 Sum_probs=121.6
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
++|...+.||.|+ ++.||||++........+++.+|++++++++||||++
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 5667777777774 6789999997666666788999999999999999875
Q ss_pred ----------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC-CCCcEEEeecccccc
Q 045449 678 ----------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD-EDMVAHISDFGIAKL 722 (823)
Q Consensus 678 ----------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~-~~~~~kl~DfGla~~ 722 (823)
++.|++++|+|+|+.+|+||||||+||+++ +++.+||+|||+++.
T Consensus 91 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 91 LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170 (320)
T ss_dssp CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBC
T ss_pred ccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccc
Confidence 356889999999999999999999999997 567999999999987
Q ss_pred cCCCCc-cccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCCc
Q 045449 723 LSGEDQ-LSKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 723 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
...... ........||+.|+|||++.+ ..++.++|||||||+++++++|..||....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp C--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 643211 112234568999999998765 678999999999999999999999997643
No 301
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.85 E-value=5.8e-23 Score=220.50 Aligned_cols=159 Identities=23% Similarity=0.355 Sum_probs=121.8
Q ss_pred HHHHHHHhccCCccceeeccC-----------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhcch--hhHHH-------
Q 045449 620 YHELLRATDRFSENNLIGIGN-----------GMEVAVKVFHQQ--YERALKSFEDECEVRKRIRH--RNLVK------- 677 (823)
Q Consensus 620 ~~~l~~at~~f~~~~~lg~g~-----------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~------- 677 (823)
+..+.-..++|...+.||.|+ +..||||++... .....+.+.+|++++.+++| +||++
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 333334456788888888876 567999998643 24556789999999999975 89987
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCC
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~ 725 (823)
++.|++++|+|+|+.+|+||||||+||++++ +.+||+|||+++....
T Consensus 100 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 100 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 4678999999999999999999999999964 8999999999987654
Q ss_pred CCccccccccccCCCcCcccccCC-----------CccccccceehhhhhhccccCCCCCcCCCc
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTK-----------GRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
...........||+.|+|||++.+ ..++.++|||||||+++++++|..||.+..
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence 332222334579999999999865 468899999999999999999999997653
No 302
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=3.5e-21 Score=193.59 Aligned_cols=163 Identities=20% Similarity=0.238 Sum_probs=131.3
Q ss_pred CCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEE
Q 045449 330 KKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFD 409 (823)
Q Consensus 330 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 409 (823)
++|++|++++|.+++..+..+..+ .+|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDEL-TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEcCCCccCcCChhhhccc-ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 356666666666666555556666 5777778877777776667778888888888888888876667788888899999
Q ss_pred ccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 410 LTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 410 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++. ++.|++|+++.|.++|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 179 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCc
Confidence 999998877777788888999999999999877777788889999999999988763 5578899999999999
Q ss_pred ccCccccCCCC
Q 045449 490 PLSLDIGNLKV 500 (823)
Q Consensus 490 ~~p~~~~~l~~ 500 (823)
.+|.++++++.
T Consensus 180 ~ip~~~~~l~~ 190 (208)
T 2o6s_A 180 VVRNSAGSVAP 190 (208)
T ss_dssp TBBCTTSSBCT
T ss_pred eeeccCccccC
Confidence 99998887765
No 303
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.85 E-value=3.3e-23 Score=216.83 Aligned_cols=149 Identities=25% Similarity=0.367 Sum_probs=124.0
Q ss_pred ccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-------------------
Q 045449 628 DRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK------------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------------------- 677 (823)
++|...+.||.|+ +..||||++..... ..+.+.+|++++++++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 4666677788775 46799999976532 2367999999999999999998
Q ss_pred ----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccccc
Q 045449 678 ----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQT 735 (823)
Q Consensus 678 ----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 735 (823)
++.|++++|+|+|+.+++||||||+||+++.++.+||+|||+++...... .......
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~ 165 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTGT 165 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTST
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc-ccccccc
Confidence 35788999999999999999999999999999999999999998764322 1222345
Q ss_pred ccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 736 LATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 736 ~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
.+|+.|+|||++.+..++.++||||+|++++++++ |..||...
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (267)
T 3t9t_A 166 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209 (267)
T ss_dssp TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence 67889999999988889999999999999999999 88888764
No 304
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.85 E-value=6e-23 Score=216.91 Aligned_cols=149 Identities=26% Similarity=0.393 Sum_probs=122.2
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH------HHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE------RALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
++|...+.||.|+ +..||||++..... ...+.|.+|++++++++||||++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 4677778888875 66799999864321 12468999999999999999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC----cEEEeecccccccCC
Q 045449 678 ----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM----VAHISDFGIAKLLSG 725 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~----~~kl~DfGla~~~~~ 725 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||+++....
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 367889999999999999999999999998876 899999999987643
Q ss_pred CCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 726 EDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 726 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
... .....||+.|+|||++.+..++.++||||+||+++++++|..||....
T Consensus 165 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 215 (283)
T 3bhy_A 165 GNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215 (283)
T ss_dssp ----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence 322 234569999999999998899999999999999999999999987643
No 305
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.85 E-value=1.6e-22 Score=227.17 Aligned_cols=146 Identities=26% Similarity=0.367 Sum_probs=113.0
Q ss_pred CCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH--------------------
Q 045449 630 FSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK-------------------- 677 (823)
Q Consensus 630 f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~-------------------- 677 (823)
|...+.||.|+ |+.||||++..... +.+.+|++++.++ +|||||+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGH---HHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCC
Confidence 34456677775 66799999876532 4678999999887 8999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC-------------CcEEEeecc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED-------------MVAHISDFG 718 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~-------------~~~kl~DfG 718 (823)
++.|++.+|+|+|+.+|+||||||+|||++.+ +.+||+|||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 25688899999999999999999999999654 489999999
Q ss_pred cccccCCCCcc--ccccccccCCCcCcccccCC-------CccccccceehhhhhhccccC-CCCCcCCC
Q 045449 719 IAKLLSGEDQL--SKQTQTLATIGYMAPEYGTK-------GRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 719 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
+|+........ ......+||+.|+|||++.+ ..++.++||||+||+++++++ |..||.+.
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 99986543221 11234579999999999865 568999999999999999998 89998654
No 306
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.85 E-value=4e-23 Score=222.01 Aligned_cols=151 Identities=25% Similarity=0.303 Sum_probs=116.0
Q ss_pred ccCCc-cceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH----------------
Q 045449 628 DRFSE-NNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~-~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~---------------- 677 (823)
++|.. .+.||+|+ +..||||++........+.+.+|++++.++ +||||++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 34544 35677765 567999999755444456889999999985 7999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCc---EEEeecccccccCCCCc--
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMV---AHISDFGIAKLLSGEDQ-- 728 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~---~kl~DfGla~~~~~~~~-- 728 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++. +||+|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 3678999999999999999999999999987765 99999999986542211
Q ss_pred ---cccccccccCCCcCcccccCC-----CccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 ---LSKQTQTLATIGYMAPEYGTK-----GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ---~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.......+||+.|+|||++.+ ..++.++||||+||++|++++|..||.+.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 111224569999999999865 56899999999999999999999999764
No 307
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.85 E-value=5.1e-23 Score=222.47 Aligned_cols=151 Identities=23% Similarity=0.292 Sum_probs=119.3
Q ss_pred ccCCccceeeccC-----------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH------------
Q 045449 628 DRFSENNLIGIGN-----------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK------------ 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~------------ 677 (823)
++|...+.||.|+ +..||||++... ......+|.+|+.++++++||||++
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 4566666677664 346999998643 2445578999999999999999998
Q ss_pred -----------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeeccc
Q 045449 678 -----------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFGI 719 (823)
Q Consensus 678 -----------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfGl 719 (823)
++.|++++|+|+|+.+|+||||||+||+++. +..+||+|||+
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccc
Confidence 3468889999999999999999999999984 45699999999
Q ss_pred ccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 720 AKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 720 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
++...............||+.|+|||++.+..++.++|||||||+++++++ |..||...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 249 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence 986544333223344568999999999988899999999999999999998 88888764
No 308
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.85 E-value=1.3e-23 Score=229.82 Aligned_cols=149 Identities=24% Similarity=0.316 Sum_probs=120.4
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhh----HHHHHHHHHHHHHHhhc-chhhHHH----------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQY----ERALKSFEDECEVRKRI-RHRNLVK---------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~---------- 677 (823)
++|...+.||.|+ +..||||+++... ....+.+.+|++++.++ +||||++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5677778888775 4669999986432 12335678899999999 6999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++......
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 213 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCC
Confidence 35689999999999999999999999999999999999999998754322
Q ss_pred ccccccccccCCCcCcccccCC--CccccccceehhhhhhccccCCCCCcCC
Q 045449 728 QLSKQTQTLATIGYMAPEYGTK--GRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 728 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
. ......+||+.|+|||++.+ ..++.++|||||||++|++++|..||..
T Consensus 214 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 214 T-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp G-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred C-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 2 22334679999999999875 3478999999999999999999999864
No 309
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.3e-21 Score=221.36 Aligned_cols=188 Identities=23% Similarity=0.334 Sum_probs=110.0
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
+|+.|+|++|.|++ +|..++ ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 78888888888874 776653 67888888888887 566 346777888888887776 455 444 6666666
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEccc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGG 388 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 388 (823)
++|++++++ . .+++|+.|+|++|.|++ +|. .+++|++|+|++
T Consensus 128 s~N~l~~lp------~---~l~~L~~L~Ls~N~l~~-lp~----------------------------~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 128 DNNQLTMLP------E---LPALLEYINADNNQLTM-LPE----------------------------LPTSLEVLSVRN 169 (571)
T ss_dssp CSSCCSCCC------C---CCTTCCEEECCSSCCSC-CCC----------------------------CCTTCCEEECCS
T ss_pred CCCcCCCCC------C---cCccccEEeCCCCccCc-CCC----------------------------cCCCcCEEECCC
Confidence 666666531 1 34455555555555543 222 234455555555
Q ss_pred CcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCC-------CEEEcccCcCcccccccccCCCCCCeEeccCC
Q 045449 389 NNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARL-------HSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLN 461 (823)
Q Consensus 389 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 461 (823)
|+|++ +|. |. ++|++|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCC
Confidence 55543 333 33 45555555555555 3333 322 34 66666666666 45555555666666666666
Q ss_pred ccccccchhhhccC
Q 045449 462 IFTSVLSSTIWNLK 475 (823)
Q Consensus 462 ~l~~~~p~~~~~l~ 475 (823)
.+++.+|..+..+.
T Consensus 241 ~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 241 PLSSRIRESLSQQT 254 (571)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHhh
Confidence 66666666655543
No 310
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.85 E-value=1.5e-22 Score=219.60 Aligned_cols=148 Identities=30% Similarity=0.368 Sum_probs=115.5
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHH--HhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEV--RKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++..... +.+..|.++ +..++||||++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 35777788888886 67799999975543 234444444 55689999987
Q ss_pred ---------------------------HHHHHHHHhhhcCCC---------CEEeccCCCCCEEeCCCCcEEEeeccccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSI---------PIIHCDLKPSNVLLDEDMVAHISDFGIAK 721 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~---------~ivHrdlk~~NiLl~~~~~~kl~DfGla~ 721 (823)
++.|++.+|.|+|+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 89 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~ 168 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168 (336)
T ss_dssp EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence 356888889999988 99999999999999999999999999998
Q ss_pred ccCCCCc------cccccccccCCCcCcccccCC-------CccccccceehhhhhhccccCCCCCcCC
Q 045449 722 LLSGEDQ------LSKQTQTLATIGYMAPEYGTK-------GRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 722 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
.+..... ........||+.|+|||++.+ ..++.++|||||||++|++++|..|+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 237 (336)
T 3g2f_A 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP 237 (336)
T ss_dssp ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence 7643221 112234579999999999876 4678899999999999999999777643
No 311
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.85 E-value=4.6e-23 Score=217.32 Aligned_cols=151 Identities=23% Similarity=0.332 Sum_probs=123.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ ++.||+|++.... ....+.+.+|++++++++||||++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 35677778888875 5679999986432 445678999999999999999998
Q ss_pred -------------------------------HHHHHHHHhhhcCCCC-----EEeccCCCCCEEeCCCCcEEEeeccccc
Q 045449 678 -------------------------------IISSSLEYLHFGHSIP-----IIHCDLKPSNVLLDEDMVAHISDFGIAK 721 (823)
Q Consensus 678 -------------------------------~~~~~l~~L~~~h~~~-----ivHrdlk~~NiLl~~~~~~kl~DfGla~ 721 (823)
++.|++.+|+|+|+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 3567888999999988 9999999999999999999999999998
Q ss_pred ccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 722 LLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 722 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
....... ......||+.|+|||++.+..++.++||||+||+++++++|..||....
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 7643321 1234578999999999988889999999999999999999999987653
No 312
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.85 E-value=3.1e-23 Score=225.89 Aligned_cols=150 Identities=19% Similarity=0.183 Sum_probs=117.3
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHhhH-----------HHHHHHHHHHHHHhhcchhhHHH----
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQYE-----------RALKSFEDECEVRKRIRHRNLVK---- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~---- 677 (823)
++|...+.||.|+ +..||||+...... ...+.+.+|+..+..++||||++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 4566667777664 35589998864321 11235778999999999999876
Q ss_pred ---------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC--cEEEee
Q 045449 678 ---------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM--VAHISD 716 (823)
Q Consensus 678 ---------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~--~~kl~D 716 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|
T Consensus 117 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~D 196 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLAD 196 (345)
T ss_dssp EEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECC
T ss_pred cccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEe
Confidence 467899999999999999999999999998777 999999
Q ss_pred cccccccCCCCcc-----ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 717 FGIAKLLSGEDQL-----SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 717 fGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
||+|+.+...... .......||+.|+|||++.+..++.++|||||||++|++++|..||.+
T Consensus 197 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 197 YGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp CTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999876432211 112345799999999999988999999999999999999999999954
No 313
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.85 E-value=9.8e-23 Score=215.59 Aligned_cols=146 Identities=19% Similarity=0.262 Sum_probs=120.0
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHh--hHHHHHHHHHHHHHHhhc-chhhHHH-------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQ--YERALKSFEDECEVRKRI-RHRNLVK------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~------------- 677 (823)
.+++|...+.||.|+ +..||||++... ......++.+|+..+.++ +||||++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 356788888999885 677999998743 233456788999999999 9999998
Q ss_pred -------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC------------------
Q 045449 678 -------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE------------------ 708 (823)
Q Consensus 678 -------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~------------------ 708 (823)
++.|++.+|+|+|+.+|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 3578899999999999999999999999984
Q ss_pred -CCcEEEeecccccccCCCCccccccccccCCCcCcccccCCC-ccccccceehhhhhhccccCCCCCcCC
Q 045449 709 -DMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 709 -~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
...+||+|||.++...... ...||+.|+|||++.+. .++.++||||+||+++++.++..++..
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 233 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN 233 (289)
T ss_dssp -CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred CceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 4479999999998764322 24599999999998766 567899999999999999999876644
No 314
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.85 E-value=1.2e-22 Score=217.81 Aligned_cols=150 Identities=23% Similarity=0.331 Sum_probs=115.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh---hHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ---YERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
.++|...+.||.|+ |..||||++... .....+++.+|++++++++||||++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35677788888875 567999998642 2455678999999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGED 727 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~ 727 (823)
++.|++++|.|+|+.+++||||||+||+++.++.+||+|||+++......
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 35688899999999999999999999999999999999999998754322
Q ss_pred ccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 728 QLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 728 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. ......||+.|+|||++.+..++.++|||||||+++++++|..||.+.
T Consensus 191 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 191 T--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred c--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 1 223457899999999999889999999999999999999999998654
No 315
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.85 E-value=8.1e-23 Score=228.96 Aligned_cols=149 Identities=28% Similarity=0.393 Sum_probs=115.1
Q ss_pred hccCCccceeeccC-----------CeEEEEEEehHhhHHHHHHHHHHHHHHhhc-chhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN-----------GMEVAVKVFHQQYERALKSFEDECEVRKRI-RHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~----------------- 677 (823)
..+|...+.||.|+ ++.||||++..... ..+.+|+++++++ +|||||+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 34677778888875 56799999865421 3467899999999 8999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC-----CCcEEEeecccccccCCCCc-
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE-----DMVAHISDFGIAKLLSGEDQ- 728 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~-----~~~~kl~DfGla~~~~~~~~- 728 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ...+||+|||+|+.......
T Consensus 100 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 100 CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp CSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred CCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 4678999999999999999999999999943 34688999999987653321
Q ss_pred cccccccccCCCcCcccccC---CCccccccceehhhhhhccccC-CCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGT---KGRVSTRGDVCSFGIISGGKET-RSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~ 778 (823)
.......+||+.|+|||++. ...++.++||||+||+++++++ |..||...
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~ 233 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence 12234567999999999987 4567889999999999999999 88888654
No 316
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.85 E-value=1.5e-22 Score=217.68 Aligned_cols=151 Identities=21% Similarity=0.223 Sum_probs=123.1
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++........+.+.+|++++++++||||++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35777788888875 5679999987665666788999999999999999997
Q ss_pred -------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCC
Q 045449 678 -------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGE 726 (823)
Q Consensus 678 -------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~ 726 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 3568889999999999999999999999999999999999998765321
Q ss_pred Ccc-------ccccccccCCCcCcccccCCCc---cccccceehhhhhhccccCCCCCcCC
Q 045449 727 DQL-------SKQTQTLATIGYMAPEYGTKGR---VSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 727 ~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
... .......||+.|+|||++.+.. ++.++|||||||+++++++|..||..
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 110 0112345799999999987543 68999999999999999999999854
No 317
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.85 E-value=7.2e-23 Score=221.15 Aligned_cols=151 Identities=29% Similarity=0.389 Sum_probs=125.2
Q ss_pred ccCCccceeeccC----------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN----------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
++|...+.||.|+ +..||||++........+.|.+|++++++++||||++
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3455566677664 5679999997666666688999999999999999997
Q ss_pred -----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 -----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 -----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++++|+++|+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~ 200 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc
Confidence 356889999999999999999999999999999999999999987654332
Q ss_pred c-ccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 L-SKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
. .......++..|+|||++.+..++.++||||+||+++++++|..|+...
T Consensus 201 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 251 (326)
T 2w1i_A 201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251 (326)
T ss_dssp EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH
T ss_pred ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 1 1123345788899999998888999999999999999999998887643
No 318
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.85 E-value=1.2e-22 Score=218.88 Aligned_cols=149 Identities=28% Similarity=0.356 Sum_probs=120.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--------HHHHHHHHHHHHHHhhcchhhHHH---------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--------ERALKSFEDECEVRKRIRHRNLVK--------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~--------- 677 (823)
.++|...+.||.|+ +..||||++.... ......+.+|++++++++||||++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 46788888999886 5679999986432 122346889999999999999998
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC---cEEEeecccccccC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM---VAHISDFGIAKLLS 724 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~---~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 168 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence 367899999999999999999999999998655 49999999998764
Q ss_pred CCCccccccccccCCCcCcccccC---CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGT---KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... ......||+.|+|||++. ...++.++||||+||++|++++|..||...
T Consensus 169 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 169 ETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp CCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred ccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 322 123457999999999863 567899999999999999999999999654
No 319
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.85 E-value=1e-22 Score=223.12 Aligned_cols=147 Identities=23% Similarity=0.331 Sum_probs=123.9
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||.|+ +..||+|++... .....+.+.+|++++++++||||++
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 5678888899886 567999998754 2445578999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.+++.+|+|+|+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~ 188 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 188 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----C--
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc----ccc
Confidence 356788889999985 9999999999999999999999999999765321 123
Q ss_pred ccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 457999999999999999999999999999999999999999764
No 320
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.84 E-value=3e-22 Score=217.69 Aligned_cols=149 Identities=28% Similarity=0.370 Sum_probs=120.5
Q ss_pred HHHHHHHhccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhh--cchhhHHH----------
Q 045449 620 YHELLRATDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKR--IRHRNLVK---------- 677 (823)
Q Consensus 620 ~~~l~~at~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~---------- 677 (823)
...-....++|...+.||.|+ ++.||||++..... +.+.+|++++.. ++||||++
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGH---HHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhH---HHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 333344567899999999986 67799999975533 567888888887 79999997
Q ss_pred ---------------------------------HHHHHHHHhhhcC--------CCCEEeccCCCCCEEeCCCCcEEEee
Q 045449 678 ---------------------------------IISSSLEYLHFGH--------SIPIIHCDLKPSNVLLDEDMVAHISD 716 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h--------~~~ivHrdlk~~NiLl~~~~~~kl~D 716 (823)
++.|++.+|+|+| +.+|+||||||+||+++.++.+||+|
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 190 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECC
T ss_pred ccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEE
Confidence 3567888888888 89999999999999999999999999
Q ss_pred cccccccCCCCccc--cccccccCCCcCcccccCCC------ccccccceehhhhhhccccCC
Q 045449 717 FGIAKLLSGEDQLS--KQTQTLATIGYMAPEYGTKG------RVSTRGDVCSFGIISGGKETR 771 (823)
Q Consensus 717 fGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~S~Gvv~~~~~~~ 771 (823)
||+++......... ......||+.|+|||++.+. .++.++|||||||++|++++|
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 99998765433211 22345799999999998765 345789999999999999999
No 321
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.84 E-value=1.5e-22 Score=213.00 Aligned_cols=148 Identities=27% Similarity=0.445 Sum_probs=116.9
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhH---HHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYE---RALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ ++.||||++..... ...+.+.+|++++++++||||++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 5677778888875 66799999975532 23467899999999999999998
Q ss_pred -------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccc
Q 045449 678 -------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQ 732 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~ 732 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~ 167 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---L 167 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc---e
Confidence 357889999999999999999999999999999999999999987643321 2
Q ss_pred cccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 733 TQTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 733 ~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
....||+.|+|||++.+..+ +.++||||+|++++++++|..||.+.
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 34578999999999887765 68999999999999999999998764
No 322
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.84 E-value=1.8e-22 Score=222.19 Aligned_cols=145 Identities=25% Similarity=0.297 Sum_probs=119.8
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc-----------hhhHHH-------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR-----------HRNLVK------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~------- 677 (823)
++|...+.||.|+ ++.||||++.... ...+.+.+|++++.++. |+||++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788888898886 6679999997543 34467889999999886 778876
Q ss_pred --------------------------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeC------CCCcE
Q 045449 678 --------------------------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLD------EDMVA 712 (823)
Q Consensus 678 --------------------------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~------~~~~~ 712 (823)
++.|++.+|+|+|+. +|+||||||+|||++ ..+.+
T Consensus 98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceE
Confidence 357889999999998 999999999999994 44589
Q ss_pred EEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 713 HISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 713 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|++++|..||...
T Consensus 178 kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 178 KIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp EECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred EEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999876432 23457999999999999989999999999999999999999999743
No 323
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.84 E-value=2.5e-22 Score=213.81 Aligned_cols=149 Identities=26% Similarity=0.397 Sum_probs=125.2
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHh---------hHHHHHHHHHHHHHHhhcc-hhhHHH-------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQ---------YERALKSFEDECEVRKRIR-HRNLVK------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~---------~~~~~~~~~~E~~~l~~l~-h~niv~------- 677 (823)
.++|...+.||.|+ ++.||||++... .....+.+.+|+++++++. ||||++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 46788888899885 677999998532 2344578899999999995 999998
Q ss_pred ---------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccC
Q 045449 678 ---------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 175 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 175 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence 36788999999999999999999999999999999999999998765
Q ss_pred CCCccccccccccCCCcCcccccC------CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGT------KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.... .....||+.|+|||++. ...++.++||||+||+++++++|..||...
T Consensus 176 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 232 (298)
T 1phk_A 176 PGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232 (298)
T ss_dssp TTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc
Confidence 4322 23457899999999874 456889999999999999999999998654
No 324
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.84 E-value=2.1e-22 Score=217.67 Aligned_cols=148 Identities=28% Similarity=0.344 Sum_probs=102.3
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHH-HHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECE-VRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ ++.||||++.... .....++..|+. +++.++||||++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 5677778888875 6779999996542 334456666666 677789999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 ----------------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 181 (327)
T 3aln_A 102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181 (327)
T ss_dssp CCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred ecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence 356788899999998 999999999999999999999999999987643321
Q ss_pred cccccccccCCCcCccccc----CCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYG----TKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++ .+..++.++|||||||+++++++|..||.+.
T Consensus 182 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (327)
T 3aln_A 182 ---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred ---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 2334799999999998 4567899999999999999999999998763
No 325
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.84 E-value=4.7e-22 Score=215.63 Aligned_cols=149 Identities=29% Similarity=0.388 Sum_probs=114.5
Q ss_pred HHHHhccCCccceeeccC----------CeEEEEEEehHhhHHHHHHHHHHHHHHhh--cchhhHHH-------------
Q 045449 623 LLRATDRFSENNLIGIGN----------GMEVAVKVFHQQYERALKSFEDECEVRKR--IRHRNLVK------------- 677 (823)
Q Consensus 623 l~~at~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~------------- 677 (823)
-....++|...+.||.|+ +..||||++..... ..+.+|.+++.. ++||||++
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 334457899999999986 67799999865533 334555555554 49999987
Q ss_pred ------------------------------HHHHHHHHhhhcCCC--------CEEeccCCCCCEEeCCCCcEEEeeccc
Q 045449 678 ------------------------------IISSSLEYLHFGHSI--------PIIHCDLKPSNVLLDEDMVAHISDFGI 719 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~--------~ivHrdlk~~NiLl~~~~~~kl~DfGl 719 (823)
++.|++.+|+|+|+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 356788888888988 999999999999999999999999999
Q ss_pred ccccCCCCccc--cccccccCCCcCcccccCCCccccc------cceehhhhhhccccCCCCC
Q 045449 720 AKLLSGEDQLS--KQTQTLATIGYMAPEYGTKGRVSTR------GDVCSFGIISGGKETRSMT 774 (823)
Q Consensus 720 a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~S~Gvv~~~~~~~~~~ 774 (823)
|+......... ......||+.|+|||++.+..++.+ +|||||||++|++++|..+
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~ 251 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS 251 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCc
Confidence 98764332211 1224579999999999887766554 9999999999999999433
No 326
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.84 E-value=9.6e-23 Score=220.27 Aligned_cols=156 Identities=23% Similarity=0.313 Sum_probs=124.4
Q ss_pred HHHHHHHhccCCcc-ceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhc-chhhHHH------
Q 045449 620 YHELLRATDRFSEN-NLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRI-RHRNLVK------ 677 (823)
Q Consensus 620 ~~~l~~at~~f~~~-~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~------ 677 (823)
|.......++|... +.||.|+ ++.||||++.... ......+.+|+.++.++ +||||++
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33344445666665 7899886 6679999986433 22346789999999999 5699998
Q ss_pred ------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeecc
Q 045449 678 ------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFG 718 (823)
Q Consensus 678 ------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfG 718 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ++.+||+|||
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 4678999999999999999999999999987 7899999999
Q ss_pred cccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 719 IAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 719 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
+++....... .....||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 180 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (327)
T 3lm5_A 180 MSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236 (327)
T ss_dssp GCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9987643322 23457999999999999999999999999999999999999998664
No 327
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.84 E-value=9.4e-23 Score=221.63 Aligned_cols=149 Identities=26% Similarity=0.295 Sum_probs=119.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHH-HhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEV-RKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |..||||++.... .....++..|+.+ ++.++||||++
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 35677777888875 6779999996432 2233455666655 77889999998
Q ss_pred ----------------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc
Q 045449 678 ----------------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 ----------------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|+|+|+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 130 e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 208 (340)
T 3an0_A 130 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV- 208 (340)
T ss_dssp CCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHH-
T ss_pred HHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccc-
Confidence 356888999999986 99999999999999999999999999998764321
Q ss_pred cccccccccCCCcCcccccC----CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 729 LSKQTQTLATIGYMAPEYGT----KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
......||+.|+|||++. ...++.++|||||||++|++++|..||...
T Consensus 209 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~ 260 (340)
T 3an0_A 209 --AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260 (340)
T ss_dssp --HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred --ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 123357999999999964 346899999999999999999999999753
No 328
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.84 E-value=6.7e-23 Score=218.74 Aligned_cols=150 Identities=28% Similarity=0.313 Sum_probs=120.6
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||+|++........+.|.+|++++++++||||++
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 46777788888875 5679999997665555678999999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|.|+|+.+++||||||+||+++.++.+||+|||+++...... ....
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 175 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRD 175 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--HC--
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--cccc
Confidence 35688899999999999999999999999999999999999986432111 1123
Q ss_pred ccccCCCcCccccc-----CCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYG-----TKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~-----~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++ ....++.++||||+||+++++.+|..||...
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 225 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 45789999999987 4667899999999999999999999998764
No 329
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.84 E-value=6.1e-23 Score=219.02 Aligned_cols=152 Identities=27% Similarity=0.398 Sum_probs=108.3
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh-HHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY-ERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|...+.||.|+ +..||||++.... ....+++.+|++++++++||||++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 46777788888875 5679999986543 344578899999999999999998
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCC
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSG 725 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~ 725 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence 245788999999999999999999999999999999999999987643
Q ss_pred CCcc---ccccccccCCCcCcccccCC-CccccccceehhhhhhccccCCCCCcCCC
Q 045449 726 EDQL---SKQTQTLATIGYMAPEYGTK-GRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 726 ~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.... .......||+.|+|||++.+ ..++.++||||+||+++++.+|..||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 230 (303)
T 2vwi_A 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 230 (303)
T ss_dssp --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence 3211 11234579999999999865 46899999999999999999999998764
No 330
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.84 E-value=2.1e-22 Score=216.22 Aligned_cols=148 Identities=26% Similarity=0.352 Sum_probs=123.0
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ |..||||++.... ..+.+.+|++++.+++||||++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 45677788888875 6779999987543 2367899999999999999998
Q ss_pred ------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccccc
Q 045449 678 ------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQT 733 (823)
Q Consensus 678 ------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~ 733 (823)
++.|++.+|.|+|+.+++||||||+||+++.++.+||+|||+++....... ...
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA--KRN 183 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--CBC
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--ccC
Confidence 357888999999999999999999999999999999999999987643321 233
Q ss_pred ccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 734 QTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 734 ~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
...||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 228 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 457999999999999989999999999999999999999999764
No 331
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.84 E-value=1.6e-22 Score=238.01 Aligned_cols=151 Identities=23% Similarity=0.303 Sum_probs=122.4
Q ss_pred ccCCccceeeccC---------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 628 DRFSENNLIGIGN---------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
++|...+.||+|+ +..||||++... .....+.|.+|+.++++++||||++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~ 469 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM 469 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEE
Confidence 5677778888885 245899998643 3455578999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 470 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~-~~ 548 (656)
T 2j0j_A 470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-YK 548 (656)
T ss_dssp ECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred EcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc-ee
Confidence 356889999999999999999999999999999999999999987644322 12
Q ss_pred ccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 732 QTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
.....+|+.|+|||++.+..++.++|||||||+++++++ |..||.+..
T Consensus 549 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 597 (656)
T 2j0j_A 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597 (656)
T ss_dssp -----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 234567889999999988899999999999999999987 888987653
No 332
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.84 E-value=5.4e-22 Score=216.31 Aligned_cols=149 Identities=22% Similarity=0.329 Sum_probs=125.7
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhhHHH-----------------HHHHHHHHHHHhhcchhhHHH--
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQYERA-----------------LKSFEDECEVRKRIRHRNLVK-- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~-- 677 (823)
.++|...+.||.|+ +..||||++....... .+.|.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 35778888888875 6779999997654321 178999999999999999987
Q ss_pred ----------------------------------------------HHHHHHHHhhhcCC-CCEEeccCCCCCEEeCCCC
Q 045449 678 ----------------------------------------------IISSSLEYLHFGHS-IPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 678 ----------------------------------------------~~~~~l~~L~~~h~-~~ivHrdlk~~NiLl~~~~ 710 (823)
++.|++.+|+|+|+ .+|+||||||+||+++.++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG 189 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTS
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCC
Confidence 35788999999998 9999999999999999999
Q ss_pred cEEEeecccccccCCCCccccccccccCCCcCcccccCCC-cccc-ccceehhhhhhccccCCCCCcCCCc
Q 045449 711 VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKG-RVST-RGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 711 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.+||+|||.++..... ......||+.|+|||++.+. .++. ++||||+||+++++++|..||....
T Consensus 190 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 190 RVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999876433 23346799999999999877 6766 9999999999999999999997643
No 333
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.84 E-value=5.8e-22 Score=216.45 Aligned_cols=146 Identities=25% Similarity=0.279 Sum_probs=122.8
Q ss_pred hccCCccceeeccC-------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhh------HHH----------
Q 045449 627 TDRFSENNLIGIGN-------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRN------LVK---------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~---------- 677 (823)
.++|...+.||.|+ +..||||++... ....+.+.+|++++++++|++ ++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 36788888888875 367999999754 334578889999999998887 332
Q ss_pred -------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEe-------------------C
Q 045449 678 -------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLL-------------------D 707 (823)
Q Consensus 678 -------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl-------------------~ 707 (823)
++.|++.+|+|+|+.+|+||||||+|||+ +
T Consensus 97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~ 176 (355)
T 2eu9_A 97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176 (355)
T ss_dssp EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccccc
Confidence 46789999999999999999999999999 5
Q ss_pred CCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 708 EDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 708 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|++++|..||...
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp SCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 6789999999999864322 23457999999999999999999999999999999999999999764
No 334
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.84 E-value=1.9e-22 Score=240.21 Aligned_cols=233 Identities=22% Similarity=0.241 Sum_probs=112.4
Q ss_pred ccchHHHHHHHHHHHHhccCCCccccccccC-CCCCCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEE
Q 045449 4 KSIISQHQQALLALKAHISYDHTNLFARNWT-SSTSVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLD 82 (823)
Q Consensus 4 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~~W~-~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~ 82 (823)
.++.+.+|+||+++......+....-. .|. ..+.++.|.++.+.. .+++.|+|.++++... +..+ |+.++
T Consensus 127 ~s~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~~-----l~~l~ 197 (727)
T 4b8c_D 127 KSLVDCTKQALMEMADTLTDSKTAKKQ-QPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQAL-----LQHKK 197 (727)
T ss_dssp -----CCCHHHHHHHHHHHHHHTTC-------------------------------------------------------
T ss_pred hhccccchhhhhhhhhhcccccCcccC-CCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hhhH-----hhcCc
Confidence 346678899999999886433222222 564 345578899998864 6899999999998863 3333 34444
Q ss_pred ccCCCCCC---------CCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCcc
Q 045449 83 LSHNKLSG---------NIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSK 153 (823)
Q Consensus 83 Ls~N~l~g---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~ 153 (823)
|+.|.|.+ ..|..|..++.|+.|+|++|.|. .+|..+.++++|++|+|++|+|+ .+|..+ ++
T Consensus 198 Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~-------~~ 268 (727)
T 4b8c_D 198 LSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEI-------KN 268 (727)
T ss_dssp ------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGG-------GG
T ss_pred cCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhh-------hC
Confidence 55444433 45777888888888888888887 66766778888888888888887 555554 78
Q ss_pred ccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCcEE
Q 045449 154 CKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEI 233 (823)
Q Consensus 154 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 233 (823)
+++|++|+|++|+|+ .+|..|++ +++|++|+|++|.|+ .+|..|.++++|++|
T Consensus 269 l~~L~~L~Ls~N~l~-~lp~~~~~-------------------------l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 269 LSNLRVLDLSHNRLT-SLPAELGS-------------------------CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp GTTCCEEECTTSCCS-SCCSSGGG-------------------------GTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred CCCCCEEeCcCCcCC-ccChhhcC-------------------------CCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 888888888888887 55655443 445566777777776 556667777777777
Q ss_pred EccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecc
Q 045449 234 SLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGEN 287 (823)
Q Consensus 234 ~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 287 (823)
+|++|.|++.+|..+......+..|+|++|.++|.+|.. |+.|++++|
T Consensus 322 ~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 322 GVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp ECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred eCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 777777776666655431112234667777777766653 445556655
No 335
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.84 E-value=2.1e-22 Score=214.66 Aligned_cols=144 Identities=29% Similarity=0.372 Sum_probs=113.5
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
..++|...+.||.|+ +..||||++... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 346788888888885 667999999654 344578999999999999999864
Q ss_pred --------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccc
Q 045449 678 --------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGI 719 (823)
Q Consensus 678 --------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGl 719 (823)
++.|++++|.|+|+.+|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 356889999999999999999999999999999999999999
Q ss_pred ccccCCCCc------------cccccccccCCCcCcccccCCC-ccccccceehhhhhhccccC
Q 045449 720 AKLLSGEDQ------------LSKQTQTLATIGYMAPEYGTKG-RVSTRGDVCSFGIISGGKET 770 (823)
Q Consensus 720 a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~S~Gvv~~~~~~ 770 (823)
++....... ........||+.|+|||++.+. .++.++||||+||++|++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 987542210 1122345799999999998764 68999999999999999987
No 336
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.84 E-value=6.3e-22 Score=214.63 Aligned_cols=145 Identities=26% Similarity=0.290 Sum_probs=121.4
Q ss_pred ccCCccceeeccC-------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhh------HHH-----------
Q 045449 628 DRFSENNLIGIGN-------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRN------LVK----------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~----------- 677 (823)
++|...+.||.|+ +..||||++... ....+.+.+|++++++++|++ +++
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4677777777765 567999999754 344578899999999998886 443
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC-------------------
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE------------------- 708 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~------------------- 708 (823)
++.|++.+|+|+|+.+|+||||||+||+++.
T Consensus 93 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T 1z57_A 93 CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172 (339)
T ss_dssp EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence 4678999999999999999999999999987
Q ss_pred CCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 709 DMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 709 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 173 ~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp CCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999874322 23457999999999999989999999999999999999999998764
No 337
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.84 E-value=9e-22 Score=217.47 Aligned_cols=149 Identities=27% Similarity=0.318 Sum_probs=121.5
Q ss_pred HHHhccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcc-hhh-----HHH--------
Q 045449 624 LRATDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIR-HRN-----LVK-------- 677 (823)
Q Consensus 624 ~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n-----iv~-------- 677 (823)
....++|...+.||.|+ +..||||++... ....+++.+|++++..++ |++ |++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 33467899999999986 567999999754 334567888999888885 443 433
Q ss_pred ---------------------------------HHHHHHHHhhhcC--CCCEEeccCCCCCEEeC--CCCcEEEeecccc
Q 045449 678 ---------------------------------IISSSLEYLHFGH--SIPIIHCDLKPSNVLLD--EDMVAHISDFGIA 720 (823)
Q Consensus 678 ---------------------------------~~~~~l~~L~~~h--~~~ivHrdlk~~NiLl~--~~~~~kl~DfGla 720 (823)
++.|++.+|.|+| +.+|+||||||+|||++ .++.+||+|||+|
T Consensus 129 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 129 NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp TEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred CceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 4567888888888 57999999999999995 4788999999999
Q ss_pred cccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 721 KLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 721 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
+..... ....+||+.|+|||++.+..++.++|||||||+++++++|..||.+.
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876432 23467999999999999999999999999999999999999999764
No 338
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.83 E-value=1.4e-21 Score=226.06 Aligned_cols=147 Identities=28% Similarity=0.379 Sum_probs=123.2
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
++|...+.||.|+ |..||||++... .....+.|.+|++++++++||||++
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6788888888875 567999998654 3455678999999999999999985
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC---cEEEeecccccc
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM---VAHISDFGIAKL 722 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~---~~kl~DfGla~~ 722 (823)
++.|++.+|+|+|+.||+||||||+||+++.++ .+||+|||+++.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 357888999999999999999999999998665 499999999987
Q ss_pred cCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 723 LSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 723 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
...... .....||+.|+|||++.+..++.++||||+||++|++++|..||..
T Consensus 174 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 174 LDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp TTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 654322 2346799999999999999999999999999999999999999865
No 339
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.83 E-value=4.6e-22 Score=210.06 Aligned_cols=144 Identities=27% Similarity=0.390 Sum_probs=122.7
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH-----------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK----------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------------- 677 (823)
.++|...+.||.|+ +..||||++.... +.+.+|++++++++||||++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 45677888888875 6679999987543 45788999999999999974
Q ss_pred -----------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEee
Q 045449 678 -----------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISD 716 (823)
Q Consensus 678 -----------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~D 716 (823)
++.|++.+|+|+|+.+|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECc
Confidence 356888999999999999999999999999999999999
Q ss_pred cccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 717 FGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 717 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
||+++....... .....||+.|+|||++.+..++.++||||+||++++++++..|+.+
T Consensus 166 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 223 (284)
T 2a19_B 166 FGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223 (284)
T ss_dssp CTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH
T ss_pred chhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh
Confidence 999987654322 2345699999999999988999999999999999999999988754
No 340
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.83 E-value=3.1e-22 Score=216.32 Aligned_cols=149 Identities=24% Similarity=0.345 Sum_probs=118.2
Q ss_pred ccCCccceeeccC------------Ce--EEEEEEehHhh-HHHHHHHHHHHHHHhhc-chhhHHH--------------
Q 045449 628 DRFSENNLIGIGN------------GM--EVAVKVFHQQY-ERALKSFEDECEVRKRI-RHRNLVK-------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~-------------- 677 (823)
++|...+.||.|+ +. .||||++.... ....+.+.+|++++.++ +||||++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 5677788898885 33 35899886432 34456799999999999 9999997
Q ss_pred ------------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEe
Q 045449 678 ------------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHIS 715 (823)
Q Consensus 678 ------------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~ 715 (823)
++.|++++|+|+|+.+|+||||||+||+++.++.+||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence 24578889999999999999999999999999999999
Q ss_pred ecccccccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccC-CCCCcCCCc
Q 045449 716 DFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKET-RSMTVGETC 779 (823)
Q Consensus 716 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~-~~~~~~~~~ 779 (823)
|||+++..... .......+++.|+|||++.+..++.++||||+||+++++++ |..||.+..
T Consensus 185 Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 246 (327)
T 1fvr_A 185 DFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246 (327)
T ss_dssp CTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc
Confidence 99999753221 12233457889999999988889999999999999999998 999987643
No 341
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.83 E-value=2.5e-22 Score=216.84 Aligned_cols=151 Identities=30% Similarity=0.352 Sum_probs=124.0
Q ss_pred HHhccCCccceeeccC-------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhc---chhhHHH---------
Q 045449 625 RATDRFSENNLIGIGN-------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRI---RHRNLVK--------- 677 (823)
Q Consensus 625 ~at~~f~~~~~lg~g~-------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~--------- 677 (823)
++.++|...+.||.|+ +..||||++.... ......+.+|+++++++ +||||++
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3557888888888875 5679999986432 11123567788877776 8999987
Q ss_pred -------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccc
Q 045449 678 -------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIA 720 (823)
Q Consensus 678 -------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla 720 (823)
++.|++++|+|+|+.||+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 3568899999999999999999999999999999999999999
Q ss_pred cccCCCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 721 KLLSGEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 721 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
+...... ......||+.|+|||++.+..++.++||||+||+++++++|..||.+.
T Consensus 168 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 168 RIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp CCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 8754322 233467899999999999989999999999999999999999999764
No 342
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.83 E-value=4.7e-22 Score=213.78 Aligned_cols=149 Identities=28% Similarity=0.340 Sum_probs=107.5
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
.++|...+.||.|+ |..||||++.... ....+.+..+..+++.++||||++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 35566667777764 6789999996542 233344555666788889999998
Q ss_pred -------------------------HHHHHHHHhhhcCCC-CEEeccCCCCCEEeCCCCcEEEeecccccccCCCCcccc
Q 045449 678 -------------------------IISSSLEYLHFGHSI-PIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSK 731 (823)
Q Consensus 678 -------------------------~~~~~l~~L~~~h~~-~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~ 731 (823)
++.|++++|+|+|+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 104 e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--- 180 (318)
T 2dyl_A 104 ELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--- 180 (318)
T ss_dssp CCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred eccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc---
Confidence 356888899999985 999999999999999999999999999986543321
Q ss_pred ccccccCCCcCcccccC-----CCccccccceehhhhhhccccCCCCCcCCC
Q 045449 732 QTQTLATIGYMAPEYGT-----KGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
.....||+.|+|||++. ...++.++|||||||+++++++|..||...
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC 232 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC
Confidence 23457999999999984 456889999999999999999999999763
No 343
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.82 E-value=1.1e-21 Score=212.67 Aligned_cols=143 Identities=19% Similarity=0.184 Sum_probs=118.0
Q ss_pred hccCCccceeeccC----------CeEEEEEEehHhh--------HHHHHHHHHHHHHHhhcc-----------------
Q 045449 627 TDRFSENNLIGIGN----------GMEVAVKVFHQQY--------ERALKSFEDECEVRKRIR----------------- 671 (823)
Q Consensus 627 t~~f~~~~~lg~g~----------~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~----------------- 671 (823)
.++|...+.||+|+ |+.||||++.... ....+.+.+|++++++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 35677788899886 6789999997542 223367889999999887
Q ss_pred ---------hhhHHH----------------------------------------------------HHHHHHHHhhhcC
Q 045449 672 ---------HRNLVK----------------------------------------------------IISSSLEYLHFGH 690 (823)
Q Consensus 672 ---------h~niv~----------------------------------------------------~~~~~l~~L~~~h 690 (823)
||||++ ++.|++.+|+|+|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 888876 3568899999999
Q ss_pred -CCCEEeccCCCCCEEeCCCC--------------------cEEEeecccccccCCCCccccccccccCCCcCcccccCC
Q 045449 691 -SIPIIHCDLKPSNVLLDEDM--------------------VAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTK 749 (823)
Q Consensus 691 -~~~ivHrdlk~~NiLl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 749 (823)
+.+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+|||++.+
T Consensus 179 ~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 179 ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCSGGGCC
T ss_pred HhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccChhhhcC
Confidence 99999999999999999876 8999999999876422 3479999999999986
Q ss_pred Cccccccceehhhhh-hccccCCCCCcCC
Q 045449 750 GRVSTRGDVCSFGII-SGGKETRSMTVGE 777 (823)
Q Consensus 750 ~~~~~~~Dv~S~Gvv-~~~~~~~~~~~~~ 777 (823)
.. +.++||||+|++ .+++..|..||.+
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc
Confidence 65 889999998777 7888888888854
No 344
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=5.6e-20 Score=187.59 Aligned_cols=165 Identities=23% Similarity=0.283 Sum_probs=129.6
Q ss_pred ccCCCCCCccceeeeeCCCCCcEEEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCc
Q 045449 32 NWTSSTSVCIWIGITCDVNSHRVIGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQ 111 (823)
Q Consensus 32 ~W~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 111 (823)
-|..+.+.|+|.+|.|+.. ++. .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 4566788999999999742 233 4555443 889999999999999989999999999999999999
Q ss_pred CcCCCchhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCC
Q 045449 112 LFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNS 191 (823)
Q Consensus 112 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~ 191 (823)
|++..+..|.++++|++|+|++|+|++..+.. |..+++|++|+|++|+++ .+|..+
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~-------~~~l~~L~~L~Ls~N~l~-~lp~~~---------------- 131 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVLPSAV-------FDRLVHLKELFMCCNKLT-ELPRGI---------------- 131 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------TTTCTTCCEEECCSSCCC-SCCTTG----------------
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCccChhH-------hCcchhhCeEeccCCccc-ccCccc----------------
Confidence 98777788899999999999999998544433 478899999999999887 445433
Q ss_pred CcccCCcccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccC
Q 045449 192 TVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSL 244 (823)
Q Consensus 192 ~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~l 244 (823)
..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+++..
T Consensus 132 ---------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 132 ---------ERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp ---------GGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred ---------ccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 34456677788888888766667777777888888877776543
No 345
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.82 E-value=1e-22 Score=219.11 Aligned_cols=152 Identities=26% Similarity=0.317 Sum_probs=116.9
Q ss_pred hccCCccceeeccC---------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH------------------
Q 045449 627 TDRFSENNLIGIGN---------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK------------------ 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~---------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~------------------ 677 (823)
.++|...+.||.|+ +..||||++.... ....+.|.+|++++++++||||++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~ 111 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLC 111 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecc
Confidence 46677788888886 2348899886432 222356889999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCc---ccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQ---LSK 731 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~---~~~ 731 (823)
++.|++.+|+|+|+.+|+||||||+||+++ ++.+||+|||+++....... ...
T Consensus 112 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~ 190 (319)
T 2y4i_B 112 KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190 (319)
T ss_dssp CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCS
T ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccc
Confidence 467889999999999999999999999998 67999999999876532111 112
Q ss_pred ccccccCCCcCcccccCC---------CccccccceehhhhhhccccCCCCCcCCCc
Q 045449 732 QTQTLATIGYMAPEYGTK---------GRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 732 ~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.....||+.|+|||++.+ ..++.++|||||||+++++++|..||....
T Consensus 191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 247 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247 (319)
T ss_dssp CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 234568999999998864 457899999999999999999999997653
No 346
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.82 E-value=2.1e-22 Score=216.87 Aligned_cols=148 Identities=22% Similarity=0.292 Sum_probs=121.4
Q ss_pred hccCCccceeeccC------------CeEEEEEEehHhhH------HHHHHHHHHHHHHhhcc--hhhHHH---------
Q 045449 627 TDRFSENNLIGIGN------------GMEVAVKVFHQQYE------RALKSFEDECEVRKRIR--HRNLVK--------- 677 (823)
Q Consensus 627 t~~f~~~~~lg~g~------------~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~--------- 677 (823)
.++|...+.||.|+ +..||||++..... ...+.+.+|++++++++ |+||++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 46677778888875 67799999975431 12245778999999996 588887
Q ss_pred --------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC-CCCcEEEeecccccccC
Q 045449 678 --------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD-EDMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 --------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~-~~~~~kl~DfGla~~~~ 724 (823)
++.|++++|+|+|+.+|+||||||+||+++ +++.+||+|||+++...
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence 356889999999999999999999999999 77999999999998765
Q ss_pred CCCccccccccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... .....||+.|+|||++.+..+ +.++|||||||+++++++|..||...
T Consensus 202 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 252 (320)
T 3a99_A 202 DTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252 (320)
T ss_dssp SSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred ccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence 322 234579999999999877665 78899999999999999999998754
No 347
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7.4e-20 Score=185.41 Aligned_cols=155 Identities=19% Similarity=0.203 Sum_probs=97.6
Q ss_pred eEEEeecCCCCccCCccccccccccceEEecCCcceeccC-ccccCcccccEEEcccCcCCCCchhcccccCCCCEEEcc
Q 045449 333 KVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIP-QVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLT 411 (823)
Q Consensus 333 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 411 (823)
+.+++++|.++. +|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 14 ~~l~~s~n~l~~-iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCccc-CccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 356666666664 454433 345667777777766643 346666667777777777666555566666666666666
Q ss_pred CCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccccc
Q 045449 412 RNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPL 491 (823)
Q Consensus 412 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~ 491 (823)
+|++++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 66666666666666666666666666666666666666666666666666666655666666666666666666655443
No 348
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.82 E-value=7.9e-22 Score=208.88 Aligned_cols=150 Identities=27% Similarity=0.380 Sum_probs=123.7
Q ss_pred HhccCCccceeeccC------------CeEEEEEEehHhh--HHHHHHHHHHHHHHhhcchhhHHH--------------
Q 045449 626 ATDRFSENNLIGIGN------------GMEVAVKVFHQQY--ERALKSFEDECEVRKRIRHRNLVK-------------- 677 (823)
Q Consensus 626 at~~f~~~~~lg~g~------------~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~-------------- 677 (823)
..++|...+.||.|+ ++.||||++.... ....+.+.+|++++++++||||++
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 346788888999885 5679999986543 233467999999999999999998
Q ss_pred --------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCC---CcEEEeecccccccCCCCc
Q 045449 678 --------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDED---MVAHISDFGIAKLLSGEDQ 728 (823)
Q Consensus 678 --------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~---~~~kl~DfGla~~~~~~~~ 728 (823)
++.|++.+|.|+|+.+|+||||||+||+++.+ +.+||+|||+++.......
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 35788999999999999999999999999754 4799999999987643322
Q ss_pred cccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 729 LSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 729 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
.....||+.|+|||++.+ .++.++||||+||+++++++|..||....
T Consensus 180 ---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (287)
T 2wei_A 180 ---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (287)
T ss_dssp ---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence 233468999999998865 58999999999999999999999987643
No 349
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=6.8e-20 Score=185.69 Aligned_cols=159 Identities=17% Similarity=0.216 Sum_probs=144.9
Q ss_pred ccceEEecCCcceeccCccccCcccccEEEcccCcCCCCch-hcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEc
Q 045449 356 SLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIP-VTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVL 434 (823)
Q Consensus 356 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 434 (823)
.-+++++++|.++. +|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 12 ~~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 12 EGTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp ETTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 34689999999985 566553 457899999999997755 45899999999999999999888889999999999999
Q ss_pred ccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCC
Q 045449 435 QGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGD 514 (823)
Q Consensus 435 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 514 (823)
++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|++|.+++..|..+..++.|+.|++++|.+++.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999998888999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 045449 515 IPI 517 (823)
Q Consensus 515 ip~ 517 (823)
.+.
T Consensus 169 c~l 171 (220)
T 2v70_A 169 CYL 171 (220)
T ss_dssp GGG
T ss_pred Cch
Confidence 663
No 350
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.81 E-value=1e-21 Score=210.67 Aligned_cols=151 Identities=22% Similarity=0.310 Sum_probs=120.2
Q ss_pred HHHhccCCccceeeccC------------CeEEEEEEehHhhH------HHHHHHHHHHHHHhhc----chhhHHH----
Q 045449 624 LRATDRFSENNLIGIGN------------GMEVAVKVFHQQYE------RALKSFEDECEVRKRI----RHRNLVK---- 677 (823)
Q Consensus 624 ~~at~~f~~~~~lg~g~------------~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~---- 677 (823)
....++|...+.||.|+ +..||||++..... .....+.+|++++.++ +||||++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999886 56799999964421 2234567899999999 8999998
Q ss_pred -------------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeC-CCCcEEEeeccc
Q 045449 678 -------------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLD-EDMVAHISDFGI 719 (823)
Q Consensus 678 -------------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~-~~~~~kl~DfGl 719 (823)
++.|++++|+|+|+.+|+||||||+||+++ .++.+||+|||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 356889999999999999999999999999 889999999999
Q ss_pred ccccCCCCccccccccccCCCcCcccccCCCcc-ccccceehhhhhhccccCCCCCcCCC
Q 045449 720 AKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRV-STRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 720 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
++...... .....||+.|+|||++.+..+ +.++||||+||+++++++|..||...
T Consensus 187 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 242 (312)
T 2iwi_A 187 GALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242 (312)
T ss_dssp CEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred hhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh
Confidence 98765332 234569999999999877666 45899999999999999999998654
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=5.2e-20 Score=201.53 Aligned_cols=178 Identities=23% Similarity=0.252 Sum_probs=122.3
Q ss_pred eEEEeecCCCCccCCccccccccccceEEecCCcceeccCcccc-CcccccEEEcccCcCCCCchhcccccCCCCEEEcc
Q 045449 333 KVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVG-NLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLT 411 (823)
Q Consensus 333 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 411 (823)
+.+++++|.++. +|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~~-iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcCc-cCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 456666666664 454433 4567777777777777777676 77777777777777776666667777777777777
Q ss_pred CCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhh---hccCCCcEEeccccccc
Q 045449 412 RNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTI---WNLKDILFIDVSSNFLD 488 (823)
Q Consensus 412 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~LdLs~N~l~ 488 (823)
+|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+ ..+++|+.|||++|.|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 777776666667777777777777777777767777777777777777777777554444 45777777777777777
Q ss_pred cccCccccCCCC--CcEEEcccCCCCCC
Q 045449 489 GPLSLDIGNLKV--VIGLDFSRNNLSGD 514 (823)
Q Consensus 489 g~~p~~~~~l~~--L~~L~ls~N~l~g~ 514 (823)
+..+..+..++. ++.|+|++|.+.+.
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCC
Confidence 555555666655 36677777766643
No 352
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.81 E-value=1.6e-21 Score=225.37 Aligned_cols=131 Identities=19% Similarity=0.104 Sum_probs=94.8
Q ss_pred CeEEEEEEehHh----------hHHHHHHHHHHHHHHhhc-chhhHHH--------------------------------
Q 045449 641 GMEVAVKVFHQQ----------YERALKSFEDECEVRKRI-RHRNLVK-------------------------------- 677 (823)
Q Consensus 641 ~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~-------------------------------- 677 (823)
|..||||++... .+...++|.+|+++|+++ .|+||++
T Consensus 259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~ 338 (569)
T 4azs_A 259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEE 338 (569)
T ss_dssp CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCC
T ss_pred cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCC
Confidence 567999998532 245567899999999999 7999998
Q ss_pred -----HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccccccCCCcCcccccCCCcc
Q 045449 678 -----IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQTLATIGYMAPEYGTKGRV 752 (823)
Q Consensus 678 -----~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 752 (823)
+++|++++|+|+|++|||||||||+|||++.++.+||+|||+|+...... ......+||++|||||++.+ .+
T Consensus 339 l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g-~~ 415 (569)
T 4azs_A 339 IDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAE-NK 415 (569)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC--ccccCceechhhccHHHhCC-CC
Confidence 57899999999999999999999999999999999999999998765432 23345789999999999865 56
Q ss_pred ccccceehhhhhhccccCCCCC
Q 045449 753 STRGDVCSFGIISGGKETRSMT 774 (823)
Q Consensus 753 ~~~~Dv~S~Gvv~~~~~~~~~~ 774 (823)
..++|+||+|++.++++++..+
T Consensus 416 ~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 416 SWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -------------CCCCTTHHH
T ss_pred CCcccccccccchhhhccccch
Confidence 7789999999998888776543
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.3e-19 Score=210.39 Aligned_cols=241 Identities=20% Similarity=0.254 Sum_probs=146.2
Q ss_pred cchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeE
Q 045449 203 LPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDL 282 (823)
Q Consensus 203 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 282 (823)
+..+..+.++.+.+....+ +..+++|+.|++++|.++ .+|. +. .+++|+.|+|++|+|++..| +..+++|+.|
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~-l~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG-IQ-YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTT-GG-GCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChH-Hc-cCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 3455667777777775443 456778888888888877 4553 33 37778888888887776544 7777777777
Q ss_pred EeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEe
Q 045449 283 ELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILM 362 (823)
Q Consensus 283 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L 362 (823)
+|++|.+++. +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.++
T Consensus 93 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-------~~l~~l~~L~~L~Ls~N~l~------------------- 144 (605)
T 1m9s_A 93 FLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI-------NGLVHLPQLESLYLGNNKIT------------------- 144 (605)
T ss_dssp ECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC-------GGGGGCTTCSEEECCSSCCC-------------------
T ss_pred ECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC-------ccccCCCccCEEECCCCccC-------------------
Confidence 7777777753 2566666666666666666543 23444555555555555444
Q ss_pred cCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccc
Q 045449 363 ANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGS 442 (823)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 442 (823)
+. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|.+++.
T Consensus 145 ------~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 145 ------DI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp ------CC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred ------Cc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 32 345566777777777777776555 67777777777777777754 2 467777777777777777754
Q ss_pred ccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCC
Q 045449 443 IPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVV 501 (823)
Q Consensus 443 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L 501 (823)
....+..+..+..+..- -+.....+.+...++...|.++..+..+...
T Consensus 213 p~~~~~~l~~~~~l~~l-----------~g~~~~~~~i~~~g~~~~~~i~~~l~~~~~~ 260 (605)
T 1m9s_A 213 PINHQSNLVVPNTVKNT-----------DGSLVTPEIISDDGDYEKPNVKWHLPEFTNE 260 (605)
T ss_dssp CCCCCSSCEEECCCBCS-----------SSCBCCCSEESTTCEEETTEEECCCSSCCSE
T ss_pred cccccccEEeccccccc-----------CCCCcCchhcccCCcccCCcceeccccccce
Confidence 33333322222111100 0112233455556666666666555555443
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1e-19 Score=192.89 Aligned_cols=172 Identities=20% Similarity=0.328 Sum_probs=100.9
Q ss_pred cCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCC
Q 045449 327 TNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQ 406 (823)
Q Consensus 327 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 406 (823)
..+++|+.|++++|.++.. | .+..+ ++|++|++++|++++..+ +..+++|++|+|++|++++ +| .+..+++|+
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l-~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYL-PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGC-TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcC-CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 3445555555555555533 2 24444 455666666666554433 5566666666666666653 22 256666666
Q ss_pred EEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccc
Q 045449 407 AFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNF 486 (823)
Q Consensus 407 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~ 486 (823)
+|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..| +..+++|+.|++++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 666666666643 3455666666666666666643 456666666666666666666544 6666666666666666
Q ss_pred cccccCccccCCCCCcEEEcccCCCCC
Q 045449 487 LDGPLSLDIGNLKVVIGLDFSRNNLSG 513 (823)
Q Consensus 487 l~g~~p~~~~~l~~L~~L~ls~N~l~g 513 (823)
+++. | .+..++.|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 6653 2 36666666666666666653
No 355
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.81 E-value=3.7e-21 Score=208.56 Aligned_cols=144 Identities=25% Similarity=0.284 Sum_probs=96.6
Q ss_pred hccCCc-cceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 627 TDRFSE-NNLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 627 t~~f~~-~~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
.++|.. .++||.|+ ++.||||++..... ..+++ ...+..+.||||++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~e~---~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQEV---DHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HHHHH---HHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HHHHH---HHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 567777 45689886 67799999965422 22222 22345668999887
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeecccccccC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 4678899999999999999999999999975 4569999999998654
Q ss_pred CCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
... .....||+.|+|||++.+..++.++||||+||+++++++|..||...
T Consensus 183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 183 QNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 321 23457899999999998889999999999999999999999998654
No 356
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.81 E-value=4.1e-21 Score=228.16 Aligned_cols=142 Identities=23% Similarity=0.291 Sum_probs=121.0
Q ss_pred ccCCccceeeccC-------------CeEEEEEEehHh-hHHHHHHHHHHHHHHhhcchhhHHH----------------
Q 045449 628 DRFSENNLIGIGN-------------GMEVAVKVFHQQ-YERALKSFEDECEVRKRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~-------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~---------------- 677 (823)
++|...+.||.|+ ++.||||++... .....+.|.+|++++.+++||||++
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 6788888898875 567999988643 3455678999999999999999997
Q ss_pred ---------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc
Q 045449 678 ---------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS 730 (823)
Q Consensus 678 ---------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~ 730 (823)
++.|++.+|+|+|+.+|+||||||+|||++.+ .+||+|||+++.....
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---- 234 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---- 234 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC----
Confidence 46789999999999999999999999999975 8999999999876432
Q ss_pred cccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCC
Q 045449 731 KQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGE 777 (823)
Q Consensus 731 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~ 777 (823)
....||+.|+|||++.++ ++.++|||||||+++++.+|..|+.+
T Consensus 235 --~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 235 --GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp --SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred --CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence 345799999999988654 48899999999999999999887765
No 357
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=6.1e-22 Score=228.63 Aligned_cols=204 Identities=17% Similarity=0.173 Sum_probs=128.0
Q ss_pred cCCCCCCeEEeecccccccCCCccCCCcccCcccccCcc-------------ccCCCCcccccccccCCCCceEEE-eec
Q 045449 274 TNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNY-------------LTSSTPELSFLSSLTNCKKLKVLI-VTG 339 (823)
Q Consensus 274 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~~~l~~l~~L~~L~-Ls~ 339 (823)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+. .+..++++++|+.|+ ++.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~-----~~~~l~~l~~L~~L~~l~~ 419 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY-----EKETLQYFSTLKAVDPMRA 419 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGG-----HHHHHHHHHHHHHHCGGGH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccC-----CHHHHHHHHhcccCcchhh
Confidence 34455666666666665 445666666666666665443 1111 233444444454444 333
Q ss_pred CCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcc
Q 045449 340 NPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPI 419 (823)
Q Consensus 340 N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 419 (823)
|.+ ..|..+.+++|.++...+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+
T Consensus 420 n~~------------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~l 478 (567)
T 1dce_A 420 AYL------------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-AL 478 (567)
T ss_dssp HHH------------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CC
T ss_pred ccc------------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-cc
Confidence 332 234444455555554322 136777777777775 555 777777777777777777 66
Q ss_pred hHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCcccccc-chhhhccCCCcEEeccccccccccCcc---c
Q 045449 420 TDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVL-SSTIWNLKDILFIDVSSNFLDGPLSLD---I 495 (823)
Q Consensus 420 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdLs~N~l~g~~p~~---~ 495 (823)
|..|+++++|+.|+|++|.|++ +| .++.+++|+.|+|++|++++.+ |..++.+++|+.|+|++|.+++..|.. +
T Consensus 479 p~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~ 556 (567)
T 1dce_A 479 PPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLA 556 (567)
T ss_dssp CGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHH
T ss_pred chhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHH
Confidence 7777777777777777777775 56 6777777777777777777766 777777777777777777777765532 2
Q ss_pred cCCCCCcEEEc
Q 045449 496 GNLKVVIGLDF 506 (823)
Q Consensus 496 ~~l~~L~~L~l 506 (823)
..++.|+.||+
T Consensus 557 ~~lp~L~~L~l 567 (567)
T 1dce_A 557 EMLPSVSSILT 567 (567)
T ss_dssp HHCTTCSEEEC
T ss_pred HHCcccCccCC
Confidence 34677777764
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=2.7e-22 Score=231.55 Aligned_cols=202 Identities=17% Similarity=0.203 Sum_probs=153.0
Q ss_pred CCCccEEEeeccccccccCccccCCCCCCeEEeeccc-------------ccccCCCccCCCcccCccc-ccCccccCCC
Q 045449 252 LPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENL-------------FSGFIPNTIGNLRNLEFGN-IADNYLTSST 317 (823)
Q Consensus 252 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~ 317 (823)
+++|+.|+|+.|+++ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+..
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~-- 424 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD-- 424 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH--
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch--
Confidence 455555555555554 455555555555555555443 5667788888888888888 67665532
Q ss_pred CcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchh
Q 045449 318 PELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPV 397 (823)
Q Consensus 318 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 397 (823)
|+.+.+++|.++...+ ..|++|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|.
T Consensus 425 --------------L~~l~l~~n~i~~l~~-------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~ 480 (567)
T 1dce_A 425 --------------LRSKFLLENSVLKMEY-------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPP 480 (567)
T ss_dssp --------------HHHHHHHHHHHHHHHH-------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCG
T ss_pred --------------hhhhhhhcccccccCc-------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccch
Confidence 3344556666654321 357888888888886 565 888999999999999998 7888
Q ss_pred cccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccc-cccccCCCCCCeEeccCCccccccch---hhhc
Q 045449 398 TFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSI-PSCLGNLTSVRVLYLGLNIFTSVLSS---TIWN 473 (823)
Q Consensus 398 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~ 473 (823)
.|+.+++|++|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|.+++.+|. .+..
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~ 558 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 558 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHH
T ss_pred hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHH
Confidence 89999999999999999997 56 7889999999999999999887 89999999999999999999987653 3455
Q ss_pred cCCCcEEec
Q 045449 474 LKDILFIDV 482 (823)
Q Consensus 474 l~~L~~LdL 482 (823)
+++|+.||+
T Consensus 559 lp~L~~L~l 567 (567)
T 1dce_A 559 LPSVSSILT 567 (567)
T ss_dssp CTTCSEEEC
T ss_pred CcccCccCC
Confidence 889999875
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1e-19 Score=211.32 Aligned_cols=191 Identities=24% Similarity=0.304 Sum_probs=103.6
Q ss_pred CccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCce
Q 045449 254 NVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK 333 (823)
Q Consensus 254 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~ 333 (823)
++..+.++.+.+....+ +..+++|+.|++++|.+... | .+..+++|+.|+|++|.+++.. .+..+++|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~-------~l~~l~~L~ 90 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK-------PLTNLKNLG 90 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCG-------GGGGCTTCC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCCh-------hhccCCCCC
Confidence 34444555555553332 34555666666666666543 2 3555555555555555555431 144455555
Q ss_pred EEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCC
Q 045449 334 VLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRN 413 (823)
Q Consensus 334 ~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 413 (823)
.|+|++|.+++. ..+..+++|+.|+|++|++++ + ..+..+++|+.|+|++|
T Consensus 91 ~L~Ls~N~l~~l---------------------------~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 91 WLFLDENKIKDL---------------------------SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNN 141 (605)
T ss_dssp EEECCSSCCCCC---------------------------TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred EEECcCCCCCCC---------------------------hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCC
Confidence 555555554431 134555556666666666553 2 23555566666666666
Q ss_pred CCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccc
Q 045449 414 KLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGP 490 (823)
Q Consensus 414 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 490 (823)
+|++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++.
T Consensus 142 ~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 142 KITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred ccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66543 345556666666666666665444 55566666666666666553 2455566666666666666543
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.1e-19 Score=182.14 Aligned_cols=153 Identities=20% Similarity=0.251 Sum_probs=109.0
Q ss_pred eEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccC
Q 045449 333 KVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTR 412 (823)
Q Consensus 333 ~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 412 (823)
+.+++++|.++. +|..+. .++++|++++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~~-iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcCc-CCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 467778887774 454433 5677777777777777677777777777777777777766677777777777777777
Q ss_pred CCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 413 NKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 413 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
|+|+...+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 77776555556777777777777777777667777777777777777777777666666666677777777776654
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.9e-19 Score=181.02 Aligned_cols=154 Identities=21% Similarity=0.295 Sum_probs=103.6
Q ss_pred ceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccC
Q 045449 358 ETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGN 437 (823)
Q Consensus 358 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 437 (823)
+.+++++|.++. +|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 456666666663 344333 56677777777776555556667777777777777777666666777777777777777
Q ss_pred cCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCC
Q 045449 438 KFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGD 514 (823)
Q Consensus 438 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 514 (823)
+|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+++..+..+..++.|+.|++++|.+.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 77755555566677777777777777776666777777777777777777766666666677777777777776653
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=6.3e-19 Score=179.76 Aligned_cols=137 Identities=20% Similarity=0.205 Sum_probs=73.4
Q ss_pred ccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEec
Q 045449 379 SNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYL 458 (823)
Q Consensus 379 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 458 (823)
++|++|+|++|++++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44555555555555544555555555555555555554444444455555555555555555444444555555555555
Q ss_pred cCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCC
Q 045449 459 GLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 459 s~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
++|+++ .+|..+..+++|+.|+|++|+|++..+..+..++.|+.|++++|.+++..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 555555 345555555555555555555555444455555666666666666555443
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=2.7e-19 Score=189.50 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=119.3
Q ss_pred EEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEe
Q 045449 258 LNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIV 337 (823)
Q Consensus 258 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~L 337 (823)
+.+..+.+++.. .+..+++|+.|++++|.++.. + .+..+++|++|++++|++++.. . +.++++|+.|++
T Consensus 29 ~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~------~-l~~l~~L~~L~l 97 (291)
T 1h6t_A 29 DNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK------P-LANLKNLGWLFL 97 (291)
T ss_dssp HHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG------G-GTTCTTCCEEEC
T ss_pred HHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCc------c-cccCCCCCEEEC
Confidence 344444444322 234566777777777777654 2 3556666666666666665541 1 445555555555
Q ss_pred ecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCC
Q 045449 338 TGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAG 417 (823)
Q Consensus 338 s~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 417 (823)
++|.++ +. ..+..+++|++|+|++|++++. ..+..+++|++|++++|++++
T Consensus 98 ~~n~l~-------------------------~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 98 DENKVK-------------------------DL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD 148 (291)
T ss_dssp CSSCCC-------------------------CG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC
T ss_pred CCCcCC-------------------------CC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc
Confidence 555544 31 1256667777777777777653 346677777777777777775
Q ss_pred cchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccc
Q 045449 418 PITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDG 489 (823)
Q Consensus 418 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 489 (823)
. ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.+++. | .+..+++|+.|++++|.++.
T Consensus 149 ~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 149 I--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred c--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 4 456777777777777777776544 77777788888888877774 3 37778888888888887775
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=5.5e-19 Score=193.35 Aligned_cols=176 Identities=20% Similarity=0.230 Sum_probs=94.2
Q ss_pred cEEEccCCcccccCCcccccCCCCccEEEeeccccccccCcccc-CCCCCCeEEeecccccccCCCccCCCcccCccccc
Q 045449 231 KEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSIT-NSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIA 309 (823)
Q Consensus 231 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 309 (823)
+.+++++|.++ .+|..+. +.++.|+|++|+|++..+..+. ++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 46677777766 5665442 3456666666666655555555 66666666666666665555555555544444444
Q ss_pred CccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccC
Q 045449 310 DNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGN 389 (823)
Q Consensus 310 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 389 (823)
+|+++. ..+..|..+ .+|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 97 ~N~l~~-----------------------------~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 146 (361)
T 2xot_A 97 SNHLHT-----------------------------LDEFLFSDL-QALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN 146 (361)
T ss_dssp SSCCCE-----------------------------ECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcCCc-----------------------------CCHHHhCCC-cCCCEEECCCCcccEECHHHhCCcccCCEEECCCC
Confidence 444433 333333333 34555555555555555555555666666666666
Q ss_pred cCCCCchhcc---cccCCCCEEEccCCCCCCcchHhhhcCCCC--CEEEcccCcCc
Q 045449 390 NLTGPIPVTF---SQLQTLQAFDLTRNKLAGPITDELCHLARL--HSLVLQGNKFS 440 (823)
Q Consensus 390 ~l~g~~p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l~ 440 (823)
+|++..+..| ..+++|++|+|++|+|++..+..+..++.+ +.|+|++|.+.
T Consensus 147 ~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 147 QISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 6664333333 345556666666666655444445554442 44455554443
No 365
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.2e-19 Score=216.04 Aligned_cols=155 Identities=22% Similarity=0.260 Sum_probs=104.3
Q ss_pred hhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecc
Q 045449 208 RLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGEN 287 (823)
Q Consensus 208 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 287 (823)
.++++.|.+. ..|..+..++.|+.|+|++|.++ .+|..++. +++|++|+|++|.|+ .+|..|+++++|++|+|++|
T Consensus 205 ~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N 280 (727)
T 4b8c_D 205 EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFK-YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHN 280 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGG-CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTS
T ss_pred Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcC-CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCC
Confidence 4455556655 56777788888888888888887 78877774 888888888888888 77888888888888888888
Q ss_pred cccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcc
Q 045449 288 LFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSI 367 (823)
Q Consensus 288 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l 367 (823)
+|+ .+|..|+.+++|++|+|++|.|+. +|..|.++++|+.|+|++|.|++.+|..+......+..++|++|.+
T Consensus 281 ~l~-~lp~~~~~l~~L~~L~L~~N~l~~------lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l 353 (727)
T 4b8c_D 281 RLT-SLPAELGSCFQLKYFYFFDNMVTT------LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRP 353 (727)
T ss_dssp CCS-SCCSSGGGGTTCSEEECCSSCCCC------CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cCC-ccChhhcCCCCCCEEECCCCCCCc------cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcc
Confidence 888 668888888888888888888764 3445777777888888888887777777665432333455666666
Q ss_pred eeccCc
Q 045449 368 SGNIPQ 373 (823)
Q Consensus 368 ~~~~p~ 373 (823)
++.+|.
T Consensus 354 ~~~~p~ 359 (727)
T 4b8c_D 354 EIPLPH 359 (727)
T ss_dssp CCCCCC
T ss_pred cCcCcc
Confidence 665554
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=3.7e-18 Score=169.75 Aligned_cols=152 Identities=17% Similarity=0.183 Sum_probs=68.4
Q ss_pred CCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCE
Q 045449 328 NCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQA 407 (823)
Q Consensus 328 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 407 (823)
.+++|+.|++++|.++ .+| .+..+ ++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l-~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYA-HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGC-TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcC-CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 3444555555555554 223 33333 34444444444332 1224444555555555555555444444555555555
Q ss_pred EEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccc
Q 045449 408 FDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFL 487 (823)
Q Consensus 408 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l 487 (823)
|+|++|++++..|..+..+++|++|+|++|.+.+.+| .+..+++|+.|++++|.+++.. .+..+++|+.|++++|++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC--
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCccc
Confidence 5555555554444445555555555555554222333 3444444444444444444421 333444444444444443
No 367
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.75 E-value=1.6e-19 Score=190.84 Aligned_cols=123 Identities=15% Similarity=0.058 Sum_probs=105.3
Q ss_pred ccCCccceeeccC------------CeEEEEEEehHhh---HHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 628 DRFSENNLIGIGN------------GMEVAVKVFHQQY---ERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 628 ~~f~~~~~lg~g~------------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
++|...+.||.|+ ++.||||++.... ....+.|.+|++++.+++||||++
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 5688888899885 6779999997543 445678999999999999999998
Q ss_pred -----------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccccccc
Q 045449 678 -----------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLSKQTQ 734 (823)
Q Consensus 678 -----------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 734 (823)
++.|++++|+|+|+.||+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~---------------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA---------------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC----------------
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc----------------
Confidence 46789999999999999999999999999999999988443
Q ss_pred cccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCCc
Q 045449 735 TLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGETC 779 (823)
Q Consensus 735 ~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~~ 779 (823)
|++ .++.++|||||||++|++++|+.||.+..
T Consensus 175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 343 36889999999999999999999997643
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.5e-18 Score=180.94 Aligned_cols=171 Identities=20% Similarity=0.296 Sum_probs=121.4
Q ss_pred CcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCe
Q 045449 202 NLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSD 281 (823)
Q Consensus 202 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 281 (823)
++.++..++++.|.+++.. .+..+++|++|++++|.++ .+| .+. .+++|++|+|++|++++..+ +.++++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~-~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQ-FFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGG-GCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHh-hCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 4567788889999988654 5778889999999999988 666 444 38889999999998886544 888888888
Q ss_pred EEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEE
Q 045449 282 LELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETIL 361 (823)
Q Consensus 282 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~ 361 (823)
|+|++|++++.. .. .. ++|+.|+|++|.+++. ..+..+++|+.|++++|++++. | .+..+ ++|++|+
T Consensus 90 L~L~~N~l~~l~-~~-~~-~~L~~L~L~~N~l~~~-------~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l-~~L~~L~ 156 (263)
T 1xeu_A 90 LSVNRNRLKNLN-GI-PS-ACLSRLFLDNNELRDT-------DSLIHLKNLEILSIRNNKLKSI-V-MLGFL-SKLEVLD 156 (263)
T ss_dssp EECCSSCCSCCT-TC-CC-SSCCEEECCSSCCSBS-------GGGTTCTTCCEEECTTSCCCBC-G-GGGGC-TTCCEEE
T ss_pred EECCCCccCCcC-cc-cc-CcccEEEccCCccCCC-------hhhcCcccccEEECCCCcCCCC-h-HHccC-CCCCEEE
Confidence 888888888643 22 22 7788888888877764 2466777777777777777654 2 45555 4666666
Q ss_pred ecCCcceeccCccccCcccccEEEcccCcCCCC
Q 045449 362 MANCSISGNIPQVVGNLSNLLVLELGGNNLTGP 394 (823)
Q Consensus 362 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 394 (823)
+++|++++. ..+..+++|+.|++++|.+++.
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 666666654 4555666666666666666543
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=9.2e-18 Score=166.13 Aligned_cols=131 Identities=21% Similarity=0.239 Sum_probs=69.4
Q ss_pred ceEEecCCcceeccCccccCcccccEEEcccCcCCCCchh-cccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEccc
Q 045449 358 ETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPV-TFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQG 436 (823)
Q Consensus 358 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 436 (823)
+++++++|+++ .+|..+.. +|++|+|++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555554 33433322 555555555555544332 255555555555555555555555555555555555555
Q ss_pred CcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccccccc
Q 045449 437 NKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPL 491 (823)
Q Consensus 437 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~ 491 (823)
|+|++..|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 5555555555555555555555555555555555555555555555555555443
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=6.4e-18 Score=168.06 Aligned_cols=155 Identities=16% Similarity=0.174 Sum_probs=134.2
Q ss_pred cccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCC
Q 045449 351 GNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLH 430 (823)
Q Consensus 351 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 430 (823)
..+ .+|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..+..+++|+
T Consensus 41 ~~l-~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQM-NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHH-HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhc-CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 455 68999999999999 555 6889999999999999776 334789999999999999999988888999999999
Q ss_pred EEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCC
Q 045449 431 SLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNN 510 (823)
Q Consensus 431 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~ 510 (823)
+|+|++|.+++..|..++.+++|+.|+|++|.+.+.+| .+..+++|+.|++++|.+++. + .+..++.|+.|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 99999999999899999999999999999998334455 689999999999999999874 3 78899999999999999
Q ss_pred CCC
Q 045449 511 LSG 513 (823)
Q Consensus 511 l~g 513 (823)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 863
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.4e-18 Score=179.36 Aligned_cols=171 Identities=23% Similarity=0.276 Sum_probs=99.9
Q ss_pred CCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCc
Q 045449 299 NLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNL 378 (823)
Q Consensus 299 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l 378 (823)
.+.++..+++++|.++.. ..+..+++|+.|++++|.++. +| .+..+ .+|++|++++|++++..+ +..+
T Consensus 17 ~l~~l~~l~l~~~~i~~~-------~~~~~l~~L~~L~l~~n~i~~-l~-~l~~l-~~L~~L~L~~N~i~~~~~--l~~l 84 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-------VSQKELSGVQNFNGDNSNIQS-LA-GMQFF-TNLKELHLSHNQISDLSP--LKDL 84 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-------ECHHHHTTCSEEECTTSCCCC-CT-TGGGC-TTCCEEECCSSCCCCCGG--GTTC
T ss_pred HHHHHHHHHhcCCCcccc-------cchhhcCcCcEEECcCCCccc-ch-HHhhC-CCCCEEECCCCccCCChh--hccC
Confidence 455566667777766653 145566666777777776663 23 45555 466666666666665443 6666
Q ss_pred ccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEec
Q 045449 379 SNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYL 458 (823)
Q Consensus 379 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 458 (823)
++|++|+|++|++++ +|. +.. ++|++|+|++|++++. + .+..+++|+.|+|++|++++. | .+..+++|+.|+|
T Consensus 85 ~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L 157 (263)
T 1xeu_A 85 TKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDL 157 (263)
T ss_dssp SSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEEC
Confidence 666666666666664 332 222 5666666666666643 2 355666666666666666643 2 4555666666666
Q ss_pred cCCccccccchhhhccCCCcEEeccccccccc
Q 045449 459 GLNIFTSVLSSTIWNLKDILFIDVSSNFLDGP 490 (823)
Q Consensus 459 s~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 490 (823)
++|++++. ..+..+++|+.|++++|.+++.
T Consensus 158 ~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 158 HGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 66666654 4455556666666666655543
No 372
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.72 E-value=1.4e-18 Score=184.99 Aligned_cols=122 Identities=25% Similarity=0.370 Sum_probs=100.0
Q ss_pred ccCCcc-ceeeccC------------CeEEEEEEehHhhHHHHHHHHHHHHHH-hhcchhhHHH----------------
Q 045449 628 DRFSEN-NLIGIGN------------GMEVAVKVFHQQYERALKSFEDECEVR-KRIRHRNLVK---------------- 677 (823)
Q Consensus 628 ~~f~~~-~~lg~g~------------~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~---------------- 677 (823)
++|... +.||.|+ +..||||++... ..+.+|++++ +..+||||++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 445554 6788875 567999999643 4567888887 5558999997
Q ss_pred ------------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCC---CCcEEEeecccccccC
Q 045449 678 ------------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDE---DMVAHISDFGIAKLLS 724 (823)
Q Consensus 678 ------------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~---~~~~kl~DfGla~~~~ 724 (823)
++.|++.+|+|+|+.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 3678899999999999999999999999997 7899999999987532
Q ss_pred CCCccccccccccCCCcCcccccCCCccccccceehhhhhhccccCCCCCcCCC
Q 045449 725 GEDQLSKQTQTLATIGYMAPEYGTKGRVSTRGDVCSFGIISGGKETRSMTVGET 778 (823)
Q Consensus 725 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~S~Gvv~~~~~~~~~~~~~~ 778 (823)
+..++.++||||+||++|++.+|..||...
T Consensus 172 ------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 172 ------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp ------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred ------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 245788999999999999999999999654
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=4.2e-17 Score=161.35 Aligned_cols=132 Identities=18% Similarity=0.284 Sum_probs=69.4
Q ss_pred cEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchH-hhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccC
Q 045449 382 LVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITD-ELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGL 460 (823)
Q Consensus 382 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 460 (823)
+++++++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555553 34443322 455555555555544432 245555555555555555555555555555555555555
Q ss_pred CccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCC
Q 045449 461 NIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 461 N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
|++++..+..+..+++|++|+|++|++++.+|..+..++.|++|++++|+++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 55555555555555555555555555555555555555555555555555554443
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=9.7e-18 Score=181.05 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=72.9
Q ss_pred cCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCC-eEeccCCccccccchhhhccCCCcEE
Q 045449 402 LQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVR-VLYLGLNIFTSVLSSTIWNLKDILFI 480 (823)
Q Consensus 402 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 480 (823)
+++|+.|+|++|+++...+..|.++.+|+.|+|++| ++...+.+|.++++|+ .+++.+ .++.+.+..|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 567777777777777555556777777777777776 6655556677777777 777776 6666666777777777777
Q ss_pred eccccccccccCccccCCCCCcEEE
Q 045449 481 DVSSNFLDGPLSLDIGNLKVVIGLD 505 (823)
Q Consensus 481 dLs~N~l~g~~p~~~~~l~~L~~L~ 505 (823)
++++|.++..-+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7777777766666777777777765
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=1.4e-16 Score=153.94 Aligned_cols=132 Identities=22% Similarity=0.271 Sum_probs=91.2
Q ss_pred cccceEEecCCcce-eccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEE
Q 045449 355 LSLETILMANCSIS-GNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLV 433 (823)
Q Consensus 355 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 433 (823)
.+|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666667666666 56666667777777777777777754 5677777777777777777766676666677777777
Q ss_pred cccCcCcccc-cccccCCCCCCeEeccCCccccccc---hhhhccCCCcEEeccccccc
Q 045449 434 LQGNKFSGSI-PSCLGNLTSVRVLYLGLNIFTSVLS---STIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 434 Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~LdLs~N~l~ 488 (823)
|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++||+++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777777532 2566677777777777777776554 45666667777777666654
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=3.8e-17 Score=176.38 Aligned_cols=266 Identities=14% Similarity=0.085 Sum_probs=185.1
Q ss_pred cchhhhhcccccccc--CCccccccCCCCCcEEEccCCcccccCCcccccC--------CCCccEEEeeccccccccCcc
Q 045449 203 LPYLARLALATNNLV--GVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLS--------LPNVETLNLGINSFSGTIPSS 272 (823)
Q Consensus 203 l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~--------l~~L~~L~Ls~N~l~~~~p~~ 272 (823)
+++|+.|||++|++. ...+..+ +.+..+.+..| .+|...|.+ +++|+.|+|.. +++.+-+.+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~----~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~a 119 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMAN----FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAA 119 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTT----EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccc----ccCHHHhcccccccccccCCCcEEECCc-cccchhHHH
Confidence 678999999999998 3332222 23556666666 456667777 99999999999 888777888
Q ss_pred ccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCce-EEEeecCCCCccCCcccc
Q 045449 273 ITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLK-VLIVTGNPLDGILPKSIG 351 (823)
Q Consensus 273 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~ 351 (823)
|.++++|+.|++++|.+..+.+.+|..+.++..+.+..+........+ ....|.++..|+ .+.+.... .++..+.
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i-~~~~f~~~~~L~~~i~~~~~~---~l~~~~~ 195 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRW-EHFAFIEGEPLETTIQVGAMG---KLEDEIM 195 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTT-TTSCEEESCCCEEEEEECTTC---CHHHHHH
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccc-cccccccccccceeEEecCCC---cHHHHHh
Confidence 999999999999999999888999999888888877664321100000 123466777777 45554321 2222221
Q ss_pred c---cccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCC
Q 045449 352 N---FSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLAR 428 (823)
Q Consensus 352 ~---~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 428 (823)
. .+.++..+.+.++-...........+++|+.|+|++|+++...+..|.++.+|+.|+|++| ++...+..|.++.+
T Consensus 196 ~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~ 274 (329)
T 3sb4_A 196 KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGR 274 (329)
T ss_dssp HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred hcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChh
Confidence 1 1245555655544221111111123678888888888888555667888888888888887 77666677888888
Q ss_pred CC-EEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEec
Q 045449 429 LH-SLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDV 482 (823)
Q Consensus 429 L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 482 (823)
|+ .+++.+ .++...+.+|.++++|+.++++.|.++.+.+..|.++++|+.+..
T Consensus 275 L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 275 LAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88 888887 777666788888888888888888888888888888888887753
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=1.3e-16 Score=150.79 Aligned_cols=127 Identities=19% Similarity=0.242 Sum_probs=95.0
Q ss_pred cccceEEecCCcce-eccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEE
Q 045449 355 LSLETILMANCSIS-GNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLV 433 (823)
Q Consensus 355 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 433 (823)
.++++|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56777777777777 66777777778888888888888755 5677778888888888888876777777778888888
Q ss_pred cccCcCccc-ccccccCCCCCCeEeccCCccccccc---hhhhccCCCcEEecc
Q 045449 434 LQGNKFSGS-IPSCLGNLTSVRVLYLGLNIFTSVLS---STIWNLKDILFIDVS 483 (823)
Q Consensus 434 Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~LdLs 483 (823)
+++|.+++. .|..+..+++|+.|++++|.+++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 888887763 34667777777777777777777655 467777777777765
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=8e-17 Score=155.65 Aligned_cols=134 Identities=17% Similarity=0.113 Sum_probs=123.2
Q ss_pred CcccccEEEcccCcCC-CCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCe
Q 045449 377 NLSNLLVLELGGNNLT-GPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRV 455 (823)
Q Consensus 377 ~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 455 (823)
..++|++|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78899899999999999999999976 77899999999999999999889999989999999
Q ss_pred EeccCCcccccc-chhhhccCCCcEEeccccccccccC---ccccCCCCCcEEEcccCCCC
Q 045449 456 LYLGLNIFTSVL-SSTIWNLKDILFIDVSSNFLDGPLS---LDIGNLKVVIGLDFSRNNLS 512 (823)
Q Consensus 456 L~Ls~N~l~~~~-p~~~~~l~~L~~LdLs~N~l~g~~p---~~~~~l~~L~~L~ls~N~l~ 512 (823)
|+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..++.|++||+++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999999853 3789999999999999999997766 57899999999999999987
No 379
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=9.3e-17 Score=151.84 Aligned_cols=130 Identities=17% Similarity=0.133 Sum_probs=119.2
Q ss_pred CcccccEEEcccCcCC-CCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCe
Q 045449 377 NLSNLLVLELGGNNLT-GPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRV 455 (823)
Q Consensus 377 ~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 455 (823)
..++|+.|++++|+++ +.+|..+..+++|++|++++|++++. ..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3578999999999998 78999999999999999999999976 77899999999999999999889999999999999
Q ss_pred EeccCCccccc-cchhhhccCCCcEEeccccccccccC---ccccCCCCCcEEEccc
Q 045449 456 LYLGLNIFTSV-LSSTIWNLKDILFIDVSSNFLDGPLS---LDIGNLKVVIGLDFSR 508 (823)
Q Consensus 456 L~Ls~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~g~~p---~~~~~l~~L~~L~ls~ 508 (823)
|++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..++.|+.||+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999985 45889999999999999999998776 5789999999999874
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=5.8e-16 Score=153.14 Aligned_cols=129 Identities=19% Similarity=0.253 Sum_probs=74.2
Q ss_pred cEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCC
Q 045449 382 LVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLN 461 (823)
Q Consensus 382 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 461 (823)
+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555555 3443332 35555566666555 44455555566666666666666555555666666666666666
Q ss_pred ccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCC
Q 045449 462 IFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGD 514 (823)
Q Consensus 462 ~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 514 (823)
++++..|..|..+++|+.|+|++|.|++..+..+..++.|+.|++++|.+.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 66665555566666666666666666654444566666666666666666543
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.4e-16 Score=151.23 Aligned_cols=133 Identities=19% Similarity=0.210 Sum_probs=80.6
Q ss_pred ccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccC
Q 045449 381 LLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGL 460 (823)
Q Consensus 381 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 460 (823)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 345555555555 333322 24566666666666655555556666666666666666655555556666666666666
Q ss_pred CccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCCCCCCC
Q 045449 461 NIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 461 N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
|++++..+..+..+++|++|++++|.+++..+..+..++.|+.|++++|+++|.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 66666555556666666666666666665544455666777777777777776554
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=7.8e-16 Score=152.22 Aligned_cols=129 Identities=22% Similarity=0.330 Sum_probs=87.5
Q ss_pred ceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccC
Q 045449 358 ETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGN 437 (823)
Q Consensus 358 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 437 (823)
+++++++|.++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34455555554 2333322 45667777777776 55666777777777777777777666666777777777777777
Q ss_pred cCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccc
Q 045449 438 KFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGP 490 (823)
Q Consensus 438 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 490 (823)
+|++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 77766666777777777777777777776666677777777777777777653
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.2e-15 Score=148.61 Aligned_cols=114 Identities=25% Similarity=0.246 Sum_probs=66.9
Q ss_pred ccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEec
Q 045449 379 SNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYL 458 (823)
Q Consensus 379 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 458 (823)
++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 45555555555555444444555556666666666665554445555666666666666666555555566666666666
Q ss_pred cCCccccccchhhhccCCCcEEeccccccccccC
Q 045449 459 GLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLS 492 (823)
Q Consensus 459 s~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 492 (823)
++|.+++..+..+..+++|+.|++++|.+++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6666665555455566666666666666665444
No 384
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.63 E-value=5e-17 Score=186.63 Aligned_cols=136 Identities=19% Similarity=0.139 Sum_probs=100.1
Q ss_pred CccceeeccC----------CeEEEEEEehHh--------hHHHHHHHHHHHHHHhhcchhhHHH---------------
Q 045449 631 SENNLIGIGN----------GMEVAVKVFHQQ--------YERALKSFEDECEVRKRIRHRNLVK--------------- 677 (823)
Q Consensus 631 ~~~~~lg~g~----------~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h~niv~--------------- 677 (823)
...+.||+|+ +..+|+|+.... .....++|.+|++++++++||||++
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 3456788876 455788875321 1223467999999999999999993
Q ss_pred -----------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeecccccccCCCCccc-----ccccc
Q 045449 678 -----------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLSGEDQLS-----KQTQT 735 (823)
Q Consensus 678 -----------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~~~~~~~-----~~~~~ 735 (823)
++.|++++|+|+|+.+|+||||||+|||++. .+||+|||+|+......... .....
T Consensus 419 E~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~ 496 (540)
T 3en9_A 419 SYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAV 496 (540)
T ss_dssp ECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhh
Confidence 4688999999999999999999999999998 99999999999875432211 12356
Q ss_pred ccCCCcCcccccCC--Cccccccceehhhhhhccc
Q 045449 736 LATIGYMAPEYGTK--GRVSTRGDVCSFGIISGGK 768 (823)
Q Consensus 736 ~gt~~y~aPE~~~~--~~~~~~~Dv~S~Gvv~~~~ 768 (823)
+||+.|||||++.. ..|+..+|+||..+-..+.
T Consensus 497 ~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~ 531 (540)
T 3en9_A 497 LSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKD 531 (540)
T ss_dssp HHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred cCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 89999999999876 6688899999987654433
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=1.1e-14 Score=160.71 Aligned_cols=252 Identities=12% Similarity=0.110 Sum_probs=144.5
Q ss_pred ccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCC
Q 045449 216 LVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPN 295 (823)
Q Consensus 216 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 295 (823)
++.+...+|.+. +|+.+.+..| ++ .++...|.+ .+|+.+++.. .++.+-+.+|.++++|+.++|++|+++.+...
T Consensus 124 i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 124 VKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp CCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred cCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 343444555553 5667776655 44 555555553 3577777764 55555556677777777777777777666555
Q ss_pred ccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccc
Q 045449 296 TIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVV 375 (823)
Q Consensus 296 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 375 (823)
+|. .++|+.+.|..+ ++.+ ...+|.+|++|+.+++..| ++.+-...|.+ .+|+.+.+ .+.++...+.+|
T Consensus 199 aF~-~~~L~~l~lp~~-l~~I-----~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~--~~L~~i~l-p~~i~~I~~~aF 267 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVT-LKEI-----GSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE--SGITTVKL-PNGVTNIASRAF 267 (401)
T ss_dssp TTT-TCCCSEEECCTT-CCEE-----CTTTTTTCTTCCCEECCTT-CCEECTTTTTT--CCCSEEEE-ETTCCEECTTTT
T ss_pred hEe-ecccCEEEeCCc-hhee-----hhhHhhCCCCCCEEecCCC-ccCcccccccc--CCccEEEe-CCCccEEChhHh
Confidence 565 466777666633 4433 2345666677777776654 44444445544 36777777 344555566677
Q ss_pred cCcccccEEEcccCcCC-----CCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCC
Q 045449 376 GNLSNLLVLELGGNNLT-----GPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNL 450 (823)
Q Consensus 376 ~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 450 (823)
.++++|+.+++.+|.+. ...+..|.++++|+.++|. |.++......|.++++|+.++|..| ++..-+.+|.++
T Consensus 268 ~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 268 YYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp TTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred hCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 77777777777776654 2233456666666666666 3355444455666666666666433 444444555555
Q ss_pred CCCCeEeccCCccccccchhhhccC-CCcEEeccccc
Q 045449 451 TSVRVLYLGLNIFTSVLSSTIWNLK-DILFIDVSSNF 486 (823)
Q Consensus 451 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~LdLs~N~ 486 (823)
+|+.+++++|.+....+..|.+++ .++.|.+..|.
T Consensus 346 -~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 346 -GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp -CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred -CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 566666666655554444444442 34444444443
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=2.8e-17 Score=163.56 Aligned_cols=135 Identities=20% Similarity=0.272 Sum_probs=64.3
Q ss_pred ccCCCCceEEEeecCCCCccCCc------cccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcc
Q 045449 326 LTNCKKLKVLIVTGNPLDGILPK------SIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTF 399 (823)
Q Consensus 326 l~~l~~L~~L~Ls~N~l~~~~p~------~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 399 (823)
+.....++.++++.+.++|.+|. .+..+ ++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l-~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTL-KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHT-TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcC-CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 33445555666666666665554 44444 345555555555544 33 4444555555555555554 344444
Q ss_pred cccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCccccc-ccccCCCCCCeEeccCCccccc
Q 045449 400 SQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIP-SCLGNLTSVRVLYLGLNIFTSV 466 (823)
Q Consensus 400 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~ 466 (823)
..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+++.
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 444445555555555543 22 34444444444444444443211 2344444444444444444443
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=5.5e-17 Score=161.43 Aligned_cols=142 Identities=18% Similarity=0.259 Sum_probs=83.0
Q ss_pred CCCcccCcccccCccccCCCCcc-cccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCcccc
Q 045449 298 GNLRNLEFGNIADNYLTSSTPEL-SFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVG 376 (823)
Q Consensus 298 ~~l~~L~~L~L~~N~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~ 376 (823)
.....++.++++.+.+++..+.+ .++..+..+++|++|++++|.+++ +| .+..+ ++|++|++++|.++ .+|..+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l-~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGM-ENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHH-TTCCEEEEEEEEEC-SCSSHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccC-CCCCEEECCCCCcc-cccchhh
Confidence 33455666666666666553321 122255666666666666666665 44 55555 56666666666666 4555555
Q ss_pred CcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcch-HhhhcCCCCCEEEcccCcCcccccc
Q 045449 377 NLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPIT-DELCHLARLHSLVLQGNKFSGSIPS 445 (823)
Q Consensus 377 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~ 445 (823)
.+++|++|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 56666666666666664 34 45666666666666666664322 3456666666666666666655543
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=7.6e-15 Score=142.86 Aligned_cols=105 Identities=18% Similarity=0.233 Sum_probs=51.3
Q ss_pred cccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccc--cccCCCCCCeEe
Q 045449 380 NLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPS--CLGNLTSVRVLY 457 (823)
Q Consensus 380 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~ 457 (823)
+|++|+|++|++++. ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 444444444444432 33444455555555555554333333345555555555555553 2333 445555555555
Q ss_pred ccCCccccccch----hhhccCCCcEEeccccccc
Q 045449 458 LGLNIFTSVLSS----TIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 458 Ls~N~l~~~~p~----~~~~l~~L~~LdLs~N~l~ 488 (823)
+++|.++.. |. .++.+++|+.||+++|.+.
T Consensus 120 l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 555555432 32 2555555666666555544
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=5.5e-14 Score=155.09 Aligned_cols=263 Identities=14% Similarity=0.095 Sum_probs=160.2
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCccc
Q 045449 228 SALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGN 307 (823)
Q Consensus 228 ~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 307 (823)
..++.+.+.+ .++ .|+...|.+ .+|+.++|..| ++.+-..+|.++ +|+.+++.. .++.+.+.+|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~-~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVK-SIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCC-EECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccC-EehHhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 4566666654 344 566666654 36888888765 665666667774 688888875 66666667777777777777
Q ss_pred ccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcc
Q 045449 308 IADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELG 387 (823)
Q Consensus 308 L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 387 (823)
+++|.++.+.. ..|. +.+|+.+.+..+ ++.+-...|.++ .+|+.+.+..| ++.....+|.+ .+|+.+++
T Consensus 187 l~~n~l~~I~~-----~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~-~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l- 255 (401)
T 4fdw_A 187 LSKTKITKLPA-----STFV-YAGIEEVLLPVT-LKEIGSQAFLKT-SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL- 255 (401)
T ss_dssp CTTSCCSEECT-----TTTT-TCCCSEEECCTT-CCEECTTTTTTC-TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-
T ss_pred cCCCcceEech-----hhEe-ecccCEEEeCCc-hheehhhHhhCC-CCCCEEecCCC-ccCcccccccc-CCccEEEe-
Confidence 77777766532 2343 466777777633 555555566666 56777776653 45455556665 56676666
Q ss_pred cCcCCCCchhcccccCCCCEEEccCCCCC-----CcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCc
Q 045449 388 GNNLTGPIPVTFSQLQTLQAFDLTRNKLA-----GPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNI 462 (823)
Q Consensus 388 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 462 (823)
.|.++......|.++++|+.+++.+|.+. ...+..|.++++|+.++|. |.++..-..+|.++++|+.++|..|
T Consensus 256 p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~- 333 (401)
T 4fdw_A 256 PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN- 333 (401)
T ss_dssp ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-
T ss_pred CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-
Confidence 34455444556666667777776666554 2334456666666666666 3455444556666666666666443
Q ss_pred cccccchhhhccCCCcEEeccccccccccCccccCCC-CCcEEEcccCC
Q 045449 463 FTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLK-VVIGLDFSRNN 510 (823)
Q Consensus 463 l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~-~L~~L~ls~N~ 510 (823)
++.+-...|.++ +|+.+++++|.+....+..|..++ .+..|.+..|.
T Consensus 334 l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 334 VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 555555566666 666666666665544444455542 45555554443
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=8.6e-15 Score=142.49 Aligned_cols=135 Identities=21% Similarity=0.172 Sum_probs=110.3
Q ss_pred cccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCC
Q 045449 325 SLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQT 404 (823)
Q Consensus 325 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 404 (823)
.+.++.+|+.|++++|.++.. |. +..+.++|++|++++|.+++. ..|..+++|++|+|++|++++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 456777888888888888854 43 555535899999999999876 67888999999999999999655555688999
Q ss_pred CCEEEccCCCCCCcchH--hhhcCCCCCEEEcccCcCccccccc----ccCCCCCCeEeccCCcccc
Q 045449 405 LQAFDLTRNKLAGPITD--ELCHLARLHSLVLQGNKFSGSIPSC----LGNLTSVRVLYLGLNIFTS 465 (823)
Q Consensus 405 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~----~~~l~~L~~L~Ls~N~l~~ 465 (823)
|++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||++.|....
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999996 4555 7889999999999999998 55664 8899999999999998765
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=6.4e-14 Score=135.39 Aligned_cols=107 Identities=22% Similarity=0.236 Sum_probs=59.9
Q ss_pred ccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccC
Q 045449 381 LLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGL 460 (823)
Q Consensus 381 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 460 (823)
.+++++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345666666665 3444332 4556666666666655555555556666666666666555444555555555555555
Q ss_pred CccccccchhhhccCCCcEEeccccccccc
Q 045449 461 NIFTSVLSSTIWNLKDILFIDVSSNFLDGP 490 (823)
Q Consensus 461 N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 490 (823)
|+|++..+..+..+++|+.|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 555555444555555555555555555543
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=3e-13 Score=149.63 Aligned_cols=236 Identities=12% Similarity=0.080 Sum_probs=104.2
Q ss_pred ccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCC
Q 045449 199 EIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSK 278 (823)
Q Consensus 199 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 278 (823)
.|.++++|+.+.+.++ +.......|.++++|+.+++..| ++ .++...+..+..|+.+.+..+... +.+.+....+
T Consensus 157 aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 157 AFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 3444455555555433 22233344555555555555444 22 344444444555555554443322 2222333344
Q ss_pred CCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccc
Q 045449 279 LSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLE 358 (823)
Q Consensus 279 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~ 358 (823)
|+.+.+..+ ++.+....|..+..|+.+.+..+..+- ....|.++..+ +
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i------~~~~F~~~~~l-------------------------~ 279 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRI------GGSLFYNCSGL-------------------------K 279 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEE------CSCTTTTCTTC-------------------------C
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCccee------ecccccccccc-------------------------c
Confidence 555544322 222333344444444444444332221 11233334444 4
Q ss_pred eEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCc
Q 045449 359 TILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNK 438 (823)
Q Consensus 359 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 438 (823)
.+....+.+ ....|..+.+|+.+.+..+ ++..-...|.++.+|+.++|.++ ++..-...|.++.+|+.+++..|
T Consensus 280 ~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~- 353 (394)
T 4fs7_A 280 KVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS- 353 (394)
T ss_dssp EEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-
T ss_pred eeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-
Confidence 444333221 1234445555555555433 33223344555555555555433 44333445555666666666544
Q ss_pred CcccccccccCCCCCCeEeccCCccccccchhhhccCCCcE
Q 045449 439 FSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILF 479 (823)
Q Consensus 439 l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 479 (823)
++..-..+|.++++|+.+++..+ ++. +...|.++++|+.
T Consensus 354 l~~I~~~aF~~C~~L~~i~lp~~-~~~-~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 354 LRKIGANAFQGCINLKKVELPKR-LEQ-YRYDFEDTTKFKW 392 (394)
T ss_dssp CCEECTTTBTTCTTCCEEEEEGG-GGG-GGGGBCTTCEEEE
T ss_pred ccEehHHHhhCCCCCCEEEECCC-CEE-hhheecCCCCCcE
Confidence 44344455666666666666543 111 2234444554443
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=9.9e-14 Score=134.04 Aligned_cols=110 Identities=18% Similarity=0.171 Sum_probs=100.7
Q ss_pred CCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecc
Q 045449 404 TLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVS 483 (823)
Q Consensus 404 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs 483 (823)
+.+.+++++|.++. +|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 45799999999995 66555 3789999999999999999999999999999999999999888889999999999999
Q ss_pred ccccccccCccccCCCCCcEEEcccCCCCCCCC
Q 045449 484 SNFLDGPLSLDIGNLKVVIGLDFSRNNLSGDIP 516 (823)
Q Consensus 484 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ip 516 (823)
+|+|++..+..+..++.|+.|+|++|.+++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999998888889999999999999999997765
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.47 E-value=7.5e-13 Score=146.39 Aligned_cols=330 Identities=10% Similarity=0.041 Sum_probs=206.1
Q ss_pred CcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCC
Q 045449 69 TPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIP 148 (823)
Q Consensus 69 ~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p 148 (823)
..+|.++++|+.+.|.. .++.+-..+|.++++|+.++|..+ ++.....+|.++.+|+.+.+..+ ++..-.
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~------- 133 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV------- 133 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT-------
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc-------
Confidence 35688899999999974 477566788999999999999865 65566778889999998877654 221111
Q ss_pred CCCccccccceeeeccceeeccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCC
Q 045449 149 STLSKCKQLEELNLGFNNLSGAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMS 228 (823)
Q Consensus 149 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 228 (823)
.+|.++..++......... .-..+|.++++|+.+. ..+.....-...|.++.+|+.+++..| ++......|.+..
T Consensus 134 ~aF~~~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~--l~~~~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~ 208 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGVTV--IGDEAFATCESLEYVS--LPDSMETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECI 208 (394)
T ss_dssp TTTTTCCCSEEECCTTCCE--ECTTTTTTCTTCCEEE--CCTTCCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCT
T ss_pred eeeecccccccccCccccc--cchhhhcccCCCcEEe--cCCccceeccccccCCCCceEEEcCCC-ceEeCchhhcccc
Confidence 1233433333322222221 1223455555555441 222222222456777788888888766 5555667788888
Q ss_pred CCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccc
Q 045449 229 ALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNI 308 (823)
Q Consensus 229 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 308 (823)
.|+.+.+..+... +....+. ..+|+.+.+..+ ++..-...+.++..|+.+.+..+... +....|..+..++.+..
T Consensus 209 ~L~~i~~~~~~~~--i~~~~~~-~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~ 283 (394)
T 4fs7_A 209 LLENMEFPNSLYY--LGDFALS-KTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIY 283 (394)
T ss_dssp TCCBCCCCTTCCE--ECTTTTT-TCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEE
T ss_pred ccceeecCCCceE--eehhhcc-cCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceecc
Confidence 8888888776543 3333333 678888888643 44455667888899999999887554 66778888888888777
Q ss_pred cCccccCCCCcccccccccCCCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEccc
Q 045449 309 ADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGG 388 (823)
Q Consensus 309 ~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 388 (823)
..+.+.. ..|..+.+|+.+.+..+ ++ ..-..+|.++.+|+.++|.+
T Consensus 284 ~~~~i~~--------~~F~~~~~L~~i~l~~~-i~-------------------------~I~~~aF~~c~~L~~i~lp~ 329 (394)
T 4fs7_A 284 GSVIVPE--------KTFYGCSSLTEVKLLDS-VK-------------------------FIGEEAFESCTSLVSIDLPY 329 (394)
T ss_dssp CSSEECT--------TTTTTCTTCCEEEECTT-CC-------------------------EECTTTTTTCTTCCEECCCT
T ss_pred Cceeecc--------ccccccccccccccccc-cc-------------------------eechhhhcCCCCCCEEEeCC
Confidence 6654432 24556666666665432 32 23344566666666666653
Q ss_pred CcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeE
Q 045449 389 NNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVL 456 (823)
Q Consensus 389 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 456 (823)
+ ++..-..+|.++.+|+.+++..| ++..-...|.++.+|+.+++..+ +. .+..+|.++++|+.+
T Consensus 330 ~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 330 L-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred c-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 3 44333455666667777776655 55444556777777777777654 22 334567777766653
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.5e-13 Score=131.69 Aligned_cols=105 Identities=20% Similarity=0.235 Sum_probs=93.2
Q ss_pred EEEEcCCCCCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecccc
Q 045449 55 IGLNISSFNLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSIN 134 (823)
Q Consensus 55 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 134 (823)
+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 47899999996 6777665 89999999999999999999999999999999999999888888899999999999999
Q ss_pred cccCccCccccCCCCCCccccccceeeeccceeec
Q 045449 135 RLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG 169 (823)
Q Consensus 135 ~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 169 (823)
+|++..+.. |..+++|++|+|++|.+..
T Consensus 92 ~l~~l~~~~-------~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGA-------FDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTT-------TTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHH-------hccccCCCEEEeCCCCccc
Confidence 998543332 4889999999999999984
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.8e-13 Score=132.65 Aligned_cols=104 Identities=22% Similarity=0.253 Sum_probs=55.1
Q ss_pred cEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCC
Q 045449 382 LVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLN 461 (823)
Q Consensus 382 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 461 (823)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 4444332 45555555555555555555555555555555555555444444455555555555555
Q ss_pred ccccccchhhhccCCCcEEeccccccc
Q 045449 462 IFTSVLSSTIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 462 ~l~~~~p~~~~~l~~L~~LdLs~N~l~ 488 (823)
+|++..+..+..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555544444555555555555555554
No 397
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.45 E-value=2.5e-14 Score=150.25 Aligned_cols=125 Identities=23% Similarity=0.172 Sum_probs=93.8
Q ss_pred HHHHHHHhccCCccceeeccC-----------CeEEEEEEehHhhH------------------HHHHHHHHHHHHHhhc
Q 045449 620 YHELLRATDRFSENNLIGIGN-----------GMEVAVKVFHQQYE------------------RALKSFEDECEVRKRI 670 (823)
Q Consensus 620 ~~~l~~at~~f~~~~~lg~g~-----------~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 670 (823)
...+......|...+.||.|+ |..||||+++.... .....|.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 334444555666678899885 67899999964321 2456799999999998
Q ss_pred chhhHHH-----------------------------HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCCcEEEeeccccc
Q 045449 671 RHRNLVK-----------------------------IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAK 721 (823)
Q Consensus 671 ~h~niv~-----------------------------~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~ 721 (823)
+|+++.. ++.|++.+|+++|+.||+||||||+|||++ ++.+||+|||+|+
T Consensus 162 ~~~~v~~~~~~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 162 QGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp TTSSSCCEEEEETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred cCCCcCeEEeccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 8433222 578899999999999999999999999999 9999999999987
Q ss_pred ccCCCCccccccccccCCCcCcccccCC----------Cccccccceeh
Q 045449 722 LLSGEDQLSKQTQTLATIGYMAPEYGTK----------GRVSTRGDVCS 760 (823)
Q Consensus 722 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Dv~S 760 (823)
. +..|+|||++.+ ..|+..+|+|.
T Consensus 241 ~---------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 241 E---------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp E---------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred E---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 3 345789998754 34566666664
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.2e-12 Score=142.09 Aligned_cols=108 Identities=19% Similarity=0.147 Sum_probs=93.0
Q ss_pred ccceeeeeCCCCCcEEEEEcCCC-CCccccCcccCCCCCCcEEEccC-CCCCCCCCCCCCCCCCCCEEECCCCcCcCCCc
Q 045449 40 CIWIGITCDVNSHRVIGLNISSF-NLQGTITPQLGNLSSLQTLDLSH-NKLSGNIPSSIFNMHTLKLLDFSDNQLFGSLS 117 (823)
Q Consensus 40 c~w~gv~c~~~~~~v~~L~L~~~-~l~g~~~~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p 117 (823)
|.|..|.|+. + +|++ +|. +..+++|++|+|++ |+|++..+..|++|++|++|+|++|+|++..|
T Consensus 8 C~~~~v~~~~------------~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCTR------------DGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECCS------------SCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcCC------------CCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 8888777753 3 5664 777 99999999999996 99998888999999999999999999999999
Q ss_pred hhhhcCCCCcEEecccccccCccCccccCCCCCCccccccceeeeccceeec
Q 045449 118 SFIFNMSSMTTIDLSINRLSGELPANICKIPSTLSKCKQLEELNLGFNNLSG 169 (823)
Q Consensus 118 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 169 (823)
..|.++++|++|||++|+|++..+..+ ..++ |++|+|++|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~-------~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTV-------QGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTT-------CSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHc-------ccCC-ceEEEeeCCCccC
Confidence 999999999999999999995433323 4444 9999999999984
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=6.2e-14 Score=153.17 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=73.9
Q ss_pred cccccEEEcccCcCCCCchhcc-----cccCCCCEEEccCCCCCCc----chHhhhcCCCCCEEEcccCcCccc----cc
Q 045449 378 LSNLLVLELGGNNLTGPIPVTF-----SQLQTLQAFDLTRNKLAGP----ITDELCHLARLHSLVLQGNKFSGS----IP 444 (823)
Q Consensus 378 l~~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 444 (823)
+++|+.|+|++|+++......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+.. ++
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 3455566666666553322222 2345566666666666532 233345566677777777766542 24
Q ss_pred ccccCCCCCCeEeccCCccccc----cchhhhccCCCcEEeccccccccccCccccCCC-----CCcEEE--cccCCCC
Q 045449 445 SCLGNLTSVRVLYLGLNIFTSV----LSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLK-----VVIGLD--FSRNNLS 512 (823)
Q Consensus 445 ~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~-----~L~~L~--ls~N~l~ 512 (823)
..+...++|+.|+|++|.+++. ++..+...+.|++|||++|.|+..-...+..+. .|+.+. +..|.++
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 4555666777777777777653 333445567777888888877765444443331 155555 5555554
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=1.5e-13 Score=150.04 Aligned_cols=158 Identities=18% Similarity=0.115 Sum_probs=118.6
Q ss_pred ccceEEecCCcceeccCcccc-----CcccccEEEcccCcCCCCchhcc-cccCCCCEEEccCCCCCCcchHhhh-----
Q 045449 356 SLETILMANCSISGNIPQVVG-----NLSNLLVLELGGNNLTGPIPVTF-SQLQTLQAFDLTRNKLAGPITDELC----- 424 (823)
Q Consensus 356 ~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~----- 424 (823)
.|++|+|++|.++......+. ..++|++|+|++|.++......+ ..+++|+.|+|++|.|+......++
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 455555555555433222222 23689999999999975444333 4567899999999999866555553
Q ss_pred cCCCCCEEEcccCcCccc----ccccccCCCCCCeEeccCCcccccc----chhhhccCCCcEEeccccccccc----cC
Q 045449 425 HLARLHSLVLQGNKFSGS----IPSCLGNLTSVRVLYLGLNIFTSVL----SSTIWNLKDILFIDVSSNFLDGP----LS 492 (823)
Q Consensus 425 ~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~LdLs~N~l~g~----~p 492 (823)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|.+++.. +..+...+.|+.|||++|.|+.. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 468899999999999753 4555678899999999999998643 56677888999999999999863 44
Q ss_pred ccccCCCCCcEEEcccCCCCC
Q 045449 493 LDIGNLKVVIGLDFSRNNLSG 513 (823)
Q Consensus 493 ~~~~~l~~L~~L~ls~N~l~g 513 (823)
..+...+.|++|||++|.++.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHhCCCCCEEeccCCCCCH
Confidence 556677999999999999873
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=3.9e-12 Score=138.03 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=54.2
Q ss_pred EecCC-cceeccCccccCcccccEEEccc-CcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCc
Q 045449 361 LMANC-SISGNIPQVVGNLSNLLVLELGG-NNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNK 438 (823)
Q Consensus 361 ~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 438 (823)
+++++ ++++ +|. +..+++|+.|+|++ |+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4442 344 55555555555553 55555444555555555555555555555555555555555555555555
Q ss_pred CcccccccccCCCCCCeEeccCCcccc
Q 045449 439 FSGSIPSCLGNLTSVRVLYLGLNIFTS 465 (823)
Q Consensus 439 l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 465 (823)
|++..+..|..++ |+.|+|++|.|+.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccC
Confidence 5544444444433 5555555555543
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.17 E-value=5.9e-10 Score=123.05 Aligned_cols=139 Identities=9% Similarity=0.085 Sum_probs=96.2
Q ss_pred cceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccc
Q 045449 366 SISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPS 445 (823)
Q Consensus 366 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 445 (823)
.++..-..+|.++.+|+.+.+.++..+ .....|.++..|+.+.+. +.++......|.++.+|+.++|..+ ++..-..
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 445555678888899999988766543 445668888899999886 4566555667888899999999754 6645567
Q ss_pred cccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccccccCccccCCCCCcEEEcccCCC
Q 045449 446 CLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLDGPLSLDIGNLKVVIGLDFSRNNL 511 (823)
Q Consensus 446 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ls~N~l 511 (823)
+|.++++|+.+.|..+ ++.+-...|.++++|+.+++++|.... ..+.....|+.+.+..|.+
T Consensus 329 aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred HhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 8889999999998654 676667788899999999998886542 3456667788777766554
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.15 E-value=1.1e-09 Score=120.95 Aligned_cols=335 Identities=12% Similarity=0.135 Sum_probs=172.1
Q ss_pred CCCCCCCCCC-CCCEEECCCCcCcCCCchhhhcCCCCcEEecccccccCccCccccCCC-CCCccccccceeeeccceee
Q 045449 91 NIPSSIFNMH-TLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLSINRLSGELPANICKIP-STLSKCKQLEELNLGFNNLS 168 (823)
Q Consensus 91 ~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~p-~~~~~l~~L~~L~Ls~N~l~ 168 (823)
+-..+|.+.. .|+.+.+..+ ++..-..+|.++++|+.+.++.|. |..+..+. .+|..+.+|+.+.+..+ ++
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~-----p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~ 126 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNK-----PSCVKKIGRQAFMFCSELTDIPILDS-VT 126 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGC-----CCCCCEECTTTTTTCTTCCBCGGGTT-CS
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCC-----CCeeeEechhhchhcccceeeccCCc-cc
Confidence 4456777774 5888888754 665667788888888888887663 22222221 24566667766655433 21
Q ss_pred ccCccccccchhhHHHHHhhcCCCcccCCcccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCccc
Q 045449 169 GAIPKEIGNLTKLKEIISTITNSTVCEIPREIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRI 248 (823)
Q Consensus 169 ~~~p~~l~~l~~L~~L~~l~~n~~~~~ip~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~ 248 (823)
..- ...|.++.+|+.+.+..+ +.......|.+..+|+.+.+..+ ++ .+....
T Consensus 127 ~I~-------------------------~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~a 178 (394)
T 4gt6_A 127 EID-------------------------SEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERA 178 (394)
T ss_dssp EEC-------------------------TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTT
T ss_pred eeh-------------------------hhhhhhhcccccccccce-eeeecccceecccccccccccce-ee-Eecccc
Confidence 111 123444455555555432 33344455666677777776654 33 344444
Q ss_pred ccCCCCccEEEeeccccccccCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccC
Q 045449 249 DLSLPNVETLNLGINSFSGTIPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTN 328 (823)
Q Consensus 249 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 328 (823)
+. ..+|+.+.+..+-. .....+|.++.+++......+......-..+........ ....+..
T Consensus 179 F~-~~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 240 (394)
T 4gt6_A 179 FT-GTALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDY----------------ALIRYPS 240 (394)
T ss_dssp TT-TCCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCE----------------EEEECCT
T ss_pred cc-ccceeEEEECCccc-ccccchhhhccccceecccccccccccceeecccccccc----------------ccccccc
Confidence 44 45666666654432 244555666666666665554433211111100000000 0000111
Q ss_pred CCCceEEEeecCCCCccCCccccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEE
Q 045449 329 CKKLKVLIVTGNPLDGILPKSIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAF 408 (823)
Q Consensus 329 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 408 (823)
...+..+.+. +.+...-...|.++ ..|+.+.+..+.. .....+|.++++|+.+.+. +.++......|.++.+|+.+
T Consensus 241 ~~~~~~~~ip-~~v~~i~~~aF~~c-~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i 316 (394)
T 4gt6_A 241 QREDPAFKIP-NGVARIETHAFDSC-AYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSI 316 (394)
T ss_dssp TCCCSEEECC-TTEEEECTTTTTTC-SSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEE
T ss_pred ccccceEEcC-CcceEcccceeeec-ccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEE
Confidence 1122222221 11222223334444 4566666654332 2445667777777777775 44553444567777777777
Q ss_pred EccCCCCCCcchHhhhcCCCCCEEEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecccccc
Q 045449 409 DLTRNKLAGPITDELCHLARLHSLVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFL 487 (823)
Q Consensus 409 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l 487 (823)
+|..+ ++..-...|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 317 ~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 317 DIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred EeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 77654 55444556777777877777544 554445677778888888877765432 3455667777777766654
No 404
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.07 E-value=9.6e-11 Score=121.24 Aligned_cols=92 Identities=22% Similarity=0.299 Sum_probs=71.6
Q ss_pred CCccceeeccC------------CeE--EEEEEehHhh------------------------HHHHHHHHHHHHHHhhcc
Q 045449 630 FSENNLIGIGN------------GME--VAVKVFHQQY------------------------ERALKSFEDECEVRKRIR 671 (823)
Q Consensus 630 f~~~~~lg~g~------------~~~--vavK~~~~~~------------------------~~~~~~~~~E~~~l~~l~ 671 (823)
|...+.||.|+ |.. ||||+++... ......+.+|++++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 44567788875 667 9999864321 112246889999999887
Q ss_pred hhhHH----------------------------------------HHHHHHHHHhhhcC-CCCEEeccCCCCCEEeCCCC
Q 045449 672 HRNLV----------------------------------------KIISSSLEYLHFGH-SIPIIHCDLKPSNVLLDEDM 710 (823)
Q Consensus 672 h~niv----------------------------------------~~~~~~l~~L~~~h-~~~ivHrdlk~~NiLl~~~~ 710 (823)
|+++. .++.|++.+|.++| +.||+||||||+|||++.
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~-- 206 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID-- 206 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--
Confidence 76431 14678899999999 999999999999999998
Q ss_pred cEEEeeccccccc
Q 045449 711 VAHISDFGIAKLL 723 (823)
Q Consensus 711 ~~kl~DfGla~~~ 723 (823)
.++|+|||+|...
T Consensus 207 ~~~liDFG~a~~~ 219 (258)
T 1zth_A 207 KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEECCCTTCEET
T ss_pred cEEEEECcccccC
Confidence 8999999999764
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.86 E-value=2.2e-09 Score=116.04 Aligned_cols=83 Identities=16% Similarity=0.274 Sum_probs=43.5
Q ss_pred CCCCCEEEcccCcCccccccccc---CCCCCCeEeccCCccccc----cchhhhccCCCcEEeccccccccccCccccC-
Q 045449 426 LARLHSLVLQGNKFSGSIPSCLG---NLTSVRVLYLGLNIFTSV----LSSTIWNLKDILFIDVSSNFLDGPLSLDIGN- 497 (823)
Q Consensus 426 l~~L~~L~Ls~N~l~g~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~- 497 (823)
+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 34555555555555433222221 345566666666666553 2333345667777777777666543333332
Q ss_pred CCCCcEEEcccCC
Q 045449 498 LKVVIGLDFSRNN 510 (823)
Q Consensus 498 l~~L~~L~ls~N~ 510 (823)
+ ...++++.|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 3557777765
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=1.4e-09 Score=117.71 Aligned_cols=64 Identities=6% Similarity=0.236 Sum_probs=29.6
Q ss_pred cCCCCEEEccCCCCCCcchHhhh---cCCCCCEEEcccCcCccc----ccccccCCCCCCeEeccCCcccc
Q 045449 402 LQTLQAFDLTRNKLAGPITDELC---HLARLHSLVLQGNKFSGS----IPSCLGNLTSVRVLYLGLNIFTS 465 (823)
Q Consensus 402 l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~ 465 (823)
+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.++.
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 44555555555555433322222 244555555555555442 22222334555555555555444
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.80 E-value=1.1e-07 Score=104.06 Aligned_cols=271 Identities=9% Similarity=0.053 Sum_probs=121.7
Q ss_pred ccCCcchhhhhccccccccCCccccccCCCCCcEEEccCCcccccCCcccccCCCCccEEEeeccccccccCccccCCCC
Q 045449 199 EIGNLPYLARLALATNNLVGVVPVTIFNMSALKEISLLNNSLSGSLPSRIDLSLPNVETLNLGINSFSGTIPSSITNSSK 278 (823)
Q Consensus 199 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 278 (823)
+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++ .+....+. ..+|+.+++..+ +...-...|.+. +
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~-~~~L~~i~lp~~-~~~i~~~~F~~~-~ 136 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQ-GTDLDDFEFPGA-TTEIGNYIFYNS-S 136 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTC-C
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-Eeccceec-cCCcccccCCCc-cccccccccccc-e
Confidence 4555555666666432 444444555554 5666655543 33 44555554 346676666544 222333334333 4
Q ss_pred CCeEEeecccccccCCCccCCCcccCcccccCccccCCCCc-------ccccccccCCCCceEEEeecCCCCccCCcccc
Q 045449 279 LSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPE-------LSFLSSLTNCKKLKVLIVTGNPLDGILPKSIG 351 (823)
Q Consensus 279 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 351 (823)
|+.+.+..+ ++.+....|..+.+++.+.+..+........ ......+..+..+..+.+..+. .......+.
T Consensus 137 l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~ 214 (379)
T 4h09_A 137 VKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFS 214 (379)
T ss_dssp CCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTT
T ss_pred eeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeecccc
Confidence 555554433 3334445566666666555544332211000 0011122223333333322211 111122222
Q ss_pred ccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCCCCCE
Q 045449 352 NFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLARLHS 431 (823)
Q Consensus 352 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 431 (823)
.. .+|+.+.+..+ ++.....+|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++......|.++.+|+.
T Consensus 215 ~~-~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~ 290 (379)
T 4h09_A 215 YG-KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTK 290 (379)
T ss_dssp TC-SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCE
T ss_pred cc-cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccc
Confidence 22 34444444332 33333445555555555555443 33233344555555555555432 33233334555555555
Q ss_pred EEcccCcCcccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEecc
Q 045449 432 LVLQGNKFSGSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVS 483 (823)
Q Consensus 432 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs 483 (823)
+++.++.++..-..+|.++++|+.++|..+ ++.+-..+|.++.+|+.+.+.
T Consensus 291 i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 291 VVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 555555555444445555555555555433 444334455555555555554
No 408
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.79 E-value=3.7e-09 Score=113.97 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhcCCCCEEeccCCCCCEEeCCCC----------cEEEeeccccccc
Q 045449 678 IISSSLEYLHFGHSIPIIHCDLKPSNVLLDEDM----------VAHISDFGIAKLL 723 (823)
Q Consensus 678 ~~~~~l~~L~~~h~~~ivHrdlk~~NiLl~~~~----------~~kl~DfGla~~~ 723 (823)
++.|++.+|+++|+.|||||||||.|||+++++ .+.|+||+.+...
T Consensus 210 l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 210 LYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 568999999999999999999999999998766 4899999987654
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.78 E-value=8.5e-08 Score=105.01 Aligned_cols=148 Identities=16% Similarity=0.147 Sum_probs=91.0
Q ss_pred cCccccCCCCCCeEEeecccccccCCCccCCCcccCcccccCccccCCCCcccccccccCCCCceEEEeecCCCCccCCc
Q 045449 269 IPSSITNSSKLSDLELGENLFSGFIPNTIGNLRNLEFGNIADNYLTSSTPELSFLSSLTNCKKLKVLIVTGNPLDGILPK 348 (823)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 348 (823)
....+....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+ ...+|.++.+|+.+.+..+ +...-..
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I-----~~~aF~~~~~l~~i~l~~~-i~~i~~~ 280 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSI-----GSFLLQNCTALKTLNFYAK-VKTVPYL 280 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEE-----CTTTTTTCTTCCEEEECCC-CSEECTT
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEe-----Cccccceeehhcccccccc-ceecccc
Confidence 3444555556666665543 33344555666666666666544 3322 1235666667777766543 4444445
Q ss_pred cccccccccceEEecCCcceeccCccccCcccccEEEcccCcCCCCchhcccccCCCCEEEccCCCCCCcchHhhhcCC
Q 045449 349 SIGNFSLSLETILMANCSISGNIPQVVGNLSNLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNKLAGPITDELCHLA 427 (823)
Q Consensus 349 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 427 (823)
.|.++ .+|+.+.+.++.++.....+|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++..-...|.++.
T Consensus 281 aF~~c-~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 281 LCSGC-SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTTTC-TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred ccccc-cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 56666 57777777777777667778888888888888654 55344557888888888888654 5544455566654
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=3.7e-08 Score=96.08 Aligned_cols=116 Identities=17% Similarity=0.181 Sum_probs=69.7
Q ss_pred ccccCcccccEEEcccC-cCCCC----chhcccccCCCCEEEccCCCCCCc----chHhhhcCCCCCEEEcccCcCccc-
Q 045449 373 QVVGNLSNLLVLELGGN-NLTGP----IPVTFSQLQTLQAFDLTRNKLAGP----ITDELCHLARLHSLVLQGNKFSGS- 442 (823)
Q Consensus 373 ~~~~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~- 442 (823)
..+...++|++|+|++| .+... +...+...++|++|+|++|+|... +...+...+.|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34555667777777777 66532 233455566777777777777643 223344456677777777777643
Q ss_pred ---ccccccCCCCCCeEec--cCCcccccc----chhhhccCCCcEEeccccccc
Q 045449 443 ---IPSCLGNLTSVRVLYL--GLNIFTSVL----SSTIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 443 ---~p~~~~~l~~L~~L~L--s~N~l~~~~----p~~~~~l~~L~~LdLs~N~l~ 488 (823)
+...+...++|++|+| ++|.++... ...+...+.|+.|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445555666777777 667666542 233344466666666666654
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.58 E-value=7.3e-09 Score=106.29 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=38.7
Q ss_pred cCCCCCEEEcccCcCcc--cccccccCCCCCCeEeccCCccccccchhhhccC--CCcEEeccccccccccCc-------
Q 045449 425 HLARLHSLVLQGNKFSG--SIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLK--DILFIDVSSNFLDGPLSL------- 493 (823)
Q Consensus 425 ~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~LdLs~N~l~g~~p~------- 493 (823)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. .|+.|+|++|.+++.+|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34444444444444444 2334444445555555555555443 2222233 556666666666655441
Q ss_pred cccCCCCCcEEE
Q 045449 494 DIGNLKVVIGLD 505 (823)
Q Consensus 494 ~~~~l~~L~~L~ 505 (823)
.+..++.|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 245566666665
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=2.2e-08 Score=102.74 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=45.3
Q ss_pred ccCCCCEEEccCCCCCC--cchHhhhcCCCCCEEEcccCcCcccccccccCCC--CCCeEeccCCccccccc-------h
Q 045449 401 QLQTLQAFDLTRNKLAG--PITDELCHLARLHSLVLQGNKFSGSIPSCLGNLT--SVRVLYLGLNIFTSVLS-------S 469 (823)
Q Consensus 401 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~~~~p-------~ 469 (823)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+| .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45555555555555555 3334455556666666666666543 2233333 66666666666665444 3
Q ss_pred hhhccCCCcEEec
Q 045449 470 TIWNLKDILFIDV 482 (823)
Q Consensus 470 ~~~~l~~L~~LdL 482 (823)
.+..+++|+.||-
T Consensus 246 il~~~P~L~~LDg 258 (267)
T 3rw6_A 246 IRERFPKLLRLDG 258 (267)
T ss_dssp HHHHCTTCCEESS
T ss_pred HHHHCcccCeECC
Confidence 4667777877773
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=4.8e-08 Score=95.25 Aligned_cols=118 Identities=9% Similarity=0.161 Sum_probs=94.2
Q ss_pred chhcccccCCCCEEEccCC-CCCCc----chHhhhcCCCCCEEEcccCcCccc----ccccccCCCCCCeEeccCCcccc
Q 045449 395 IPVTFSQLQTLQAFDLTRN-KLAGP----ITDELCHLARLHSLVLQGNKFSGS----IPSCLGNLTSVRVLYLGLNIFTS 465 (823)
Q Consensus 395 ~p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~ 465 (823)
+...+...++|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4455677899999999999 98753 344456678999999999999753 34556667899999999999987
Q ss_pred c----cchhhhccCCCcEEec--cccccccc----cCccccCCCCCcEEEcccCCCC
Q 045449 466 V----LSSTIWNLKDILFIDV--SSNFLDGP----LSLDIGNLKVVIGLDFSRNNLS 512 (823)
Q Consensus 466 ~----~p~~~~~l~~L~~LdL--s~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 512 (823)
. +...+...+.|++|+| ++|.++.. +...+...+.|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5 4566777889999999 88999875 3445666689999999999876
No 414
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.41 E-value=9.8e-05 Score=70.09 Aligned_cols=82 Identities=10% Similarity=0.117 Sum_probs=38.5
Q ss_pred cccEEEcccCcCCCCchhcccccCCCCEEEccCCC-CCCcchHhhhcC----CCCCEEEcccCc-CcccccccccCCCCC
Q 045449 380 NLLVLELGGNNLTGPIPVTFSQLQTLQAFDLTRNK-LAGPITDELCHL----ARLHSLVLQGNK-FSGSIPSCLGNLTSV 453 (823)
Q Consensus 380 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L 453 (823)
+|+.||++++.++..--..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543333334455555555555553 443322233332 245555555543 443333334445555
Q ss_pred CeEeccCC
Q 045449 454 RVLYLGLN 461 (823)
Q Consensus 454 ~~L~Ls~N 461 (823)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.31 E-value=0.00011 Score=69.75 Aligned_cols=83 Identities=14% Similarity=0.078 Sum_probs=48.8
Q ss_pred CCCCEEEccCCCCCCcchHhhhcCCCCCEEEcccCc-CcccccccccCC----CCCCeEeccCC-ccccccchhhhccCC
Q 045449 403 QTLQAFDLTRNKLAGPITDELCHLARLHSLVLQGNK-FSGSIPSCLGNL----TSVRVLYLGLN-IFTSVLSSTIWNLKD 476 (823)
Q Consensus 403 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N-~l~~~~p~~~~~l~~ 476 (823)
..|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..+..+ ++|+.|+|+++ ++|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 457777777777765544555667777777777764 554333334443 25666666665 355544444555566
Q ss_pred CcEEecccc
Q 045449 477 ILFIDVSSN 485 (823)
Q Consensus 477 L~~LdLs~N 485 (823)
|+.|++++.
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
No 416
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.29 E-value=0.00024 Score=68.70 Aligned_cols=86 Identities=8% Similarity=0.100 Sum_probs=44.6
Q ss_pred cCcccccEEEcccC-cCCCC----chhcccccCCCCEEEccCCCCCCc----chHhhhcCCCCCEEEcccCcCcccc---
Q 045449 376 GNLSNLLVLELGGN-NLTGP----IPVTFSQLQTLQAFDLTRNKLAGP----ITDELCHLARLHSLVLQGNKFSGSI--- 443 (823)
Q Consensus 376 ~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~--- 443 (823)
.+-+.|++|+|++| ++... +-..+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|...-
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34455666666664 55421 233444556666666666666532 2222334456666666666665332
Q ss_pred -cccccCCCCCCeEeccCC
Q 045449 444 -PSCLGNLTSVRVLYLGLN 461 (823)
Q Consensus 444 -p~~~~~l~~L~~L~Ls~N 461 (823)
-..+..-+.|+.|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 223344455666666543
No 417
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.15 E-value=0.00013 Score=74.87 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=26.6
Q ss_pred CCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 692 IPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 692 ~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
..++|+|++|.||+++++..+.|+||+.+..
T Consensus 183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp EEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 5599999999999998766678999997764
No 418
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.02 E-value=0.00051 Score=66.42 Aligned_cols=113 Identities=14% Similarity=0.215 Sum_probs=79.5
Q ss_pred cccccCCCCEEEccCC-CCCCc----chHhhhcCCCCCEEEcccCcCcccc----cccccCCCCCCeEeccCCccccccc
Q 045449 398 TFSQLQTLQAFDLTRN-KLAGP----ITDELCHLARLHSLVLQGNKFSGSI----PSCLGNLTSVRVLYLGLNIFTSVLS 468 (823)
Q Consensus 398 ~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~----p~~~~~l~~L~~L~Ls~N~l~~~~p 468 (823)
.+.+-+.|+.|+|++| +|... +...+..-+.|+.|+|++|.|...- ...+..-+.|+.|+|++|.|+..--
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678999999986 77642 3344566688999999999997543 3345566889999999999986533
Q ss_pred h----hhhccCCCcEEecccc---cccc----ccCccccCCCCCcEEEcccCC
Q 045449 469 S----TIWNLKDILFIDVSSN---FLDG----PLSLDIGNLKVVIGLDFSRNN 510 (823)
Q Consensus 469 ~----~~~~l~~L~~LdLs~N---~l~g----~~p~~~~~l~~L~~L~ls~N~ 510 (823)
. .+..-+.|+.|+|++| .+.. .+...+..-+.|..|+++.|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 3 4445567999999865 3343 234455566788888887654
No 419
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.00 E-value=0.00023 Score=72.70 Aligned_cols=31 Identities=16% Similarity=0.286 Sum_probs=27.0
Q ss_pred CCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 692 IPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 692 ~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
..++|+|++|.||+++++..++|+|||.+..
T Consensus 184 ~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 184 LVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp EEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred eEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 3499999999999998877778999998765
No 420
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.69 E-value=0.0031 Score=56.80 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=24.6
Q ss_pred EEEcCCCCCc-cccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCCcC
Q 045449 56 GLNISSFNLQ-GTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDNQL 112 (823)
Q Consensus 56 ~L~L~~~~l~-g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 112 (823)
.++.++++++ ..+|..+- .+|++|||++|+|+...+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 23333221 2345555555555433334444444444444444443
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.46 E-value=0.0041 Score=56.06 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=28.1
Q ss_pred EEEcccCcCc-ccccccccCCCCCCeEeccCCccccccchhhhccCCCcEEeccccccc
Q 045449 431 SLVLQGNKFS-GSIPSCLGNLTSVRVLYLGLNIFTSVLSSTIWNLKDILFIDVSSNFLD 488 (823)
Q Consensus 431 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 488 (823)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555554 23343221 23555555555555555555555555555555555554
No 422
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=96.11 E-value=0.00038 Score=73.17 Aligned_cols=83 Identities=23% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCEEeccCCCCCEEeCC--CCcEEEeecccccccCCCCcccccccc------------ccCCCcCc-ccccCCCcccccc
Q 045449 692 IPIIHCDLKPSNVLLDE--DMVAHISDFGIAKLLSGEDQLSKQTQT------------LATIGYMA-PEYGTKGRVSTRG 756 (823)
Q Consensus 692 ~~ivHrdlk~~NiLl~~--~~~~kl~DfGla~~~~~~~~~~~~~~~------------~gt~~y~a-PE~~~~~~~~~~~ 756 (823)
..++|+|++|.||++++ ...+.|+||+.+..-............ ....++.. |+... ......
T Consensus 191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~--r~~~~~ 268 (304)
T 3sg8_A 191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLE--KYRMKE 268 (304)
T ss_dssp CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHH--HHHHHH
T ss_pred ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHH--HHHHHH
Confidence 56899999999999997 567889999998764322111000000 00001111 22111 112225
Q ss_pred ceehhhhhhccccCCCCCcC
Q 045449 757 DVCSFGIISGGKETRSMTVG 776 (823)
Q Consensus 757 Dv~S~Gvv~~~~~~~~~~~~ 776 (823)
+.|++|++++.+.+|+.++.
T Consensus 269 ~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 269 KYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHH
Confidence 88999999999999987763
No 423
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=92.92 E-value=0.26 Score=51.66 Aligned_cols=33 Identities=18% Similarity=0.345 Sum_probs=28.2
Q ss_pred CCEEeccCCCCCEEeCCCCcEEEeecccccccC
Q 045449 692 IPIIHCDLKPSNVLLDEDMVAHISDFGIAKLLS 724 (823)
Q Consensus 692 ~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~~ 724 (823)
..++|+|++|.||+++.+..+.|+||+.+..-.
T Consensus 207 ~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 207 PCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 457999999999999987678999999987643
No 424
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=92.59 E-value=0.11 Score=55.57 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=27.4
Q ss_pred CCCEEeccCCCCCEEeCCCC--cEEEeecccccc
Q 045449 691 SIPIIHCDLKPSNVLLDEDM--VAHISDFGIAKL 722 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~--~~kl~DfGla~~ 722 (823)
...++|+|+++.||+++.++ .+.|+||+.+..
T Consensus 215 ~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 215 LTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36799999999999998765 368999999875
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=89.95 E-value=0.23 Score=52.32 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=29.3
Q ss_pred CCCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 220 ~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 220 KSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred ccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 357899999999999998788899999998864
No 426
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=89.43 E-value=0.26 Score=53.91 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=29.3
Q ss_pred CCCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
+...++|+|+++.|||++.++ ++++||+.+..-
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 678899999999999998776 999999988763
No 427
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=84.16 E-value=0.49 Score=47.93 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=28.6
Q ss_pred CCCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
+...++|+|+.+.|||+++++.+-|+||+.+..-
T Consensus 191 ~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 191 PDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp CCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred CCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 3456899999999999998877889999988653
No 428
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=83.52 E-value=0.74 Score=49.11 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=28.6
Q ss_pred CCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 692 IPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 692 ~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
+.++|+|+++.||+++++..+.|+||+.+..-
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 67999999999999988778899999998764
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=83.46 E-value=0.58 Score=48.78 Aligned_cols=32 Identities=31% Similarity=0.358 Sum_probs=27.7
Q ss_pred CCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 691 SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
..+++|+|+.+.||+++++..+.|+||+.+..
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 46799999999999999876678999998764
No 430
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=82.84 E-value=0.95 Score=47.44 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=29.3
Q ss_pred CCCCEEeccCCCCCEEeCCC----CcEEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDED----MVAHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~----~~~kl~DfGla~~~ 723 (823)
+...++|+|+.+.||+++.+ ..+.|+||+.+..-
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 45689999999999999874 68999999988764
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=82.41 E-value=0.46 Score=48.78 Aligned_cols=25 Identities=40% Similarity=0.403 Sum_probs=21.0
Q ss_pred CCCEEeccCCCCCEEeCCCCcEEEee
Q 045449 691 SIPIIHCDLKPSNVLLDEDMVAHISD 716 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~~~kl~D 716 (823)
.+.+||+|+.+.||+++.++ +.+.|
T Consensus 187 ~p~LvHGDlw~gNvl~~~~g-~~~iD 211 (288)
T 3f7w_A 187 PPARIHGDLWNGNVLWQDDG-AVVID 211 (288)
T ss_dssp CCEEECSCCSGGGEEEETTE-EEECS
T ss_pred CCeeeecCCCCCcEEEcCCC-eEEEe
Confidence 46799999999999999887 45666
No 432
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.12 E-value=0.78 Score=31.81 Aligned_cols=6 Identities=0% Similarity=-0.097 Sum_probs=2.3
Q ss_pred HHhhhh
Q 045449 589 TLKWKL 594 (823)
Q Consensus 589 ~~~~~~ 594 (823)
+++|++
T Consensus 31 ~~~~RR 36 (44)
T 2l2t_A 31 AVYVRR 36 (44)
T ss_dssp HHHHHT
T ss_pred HHHhhh
Confidence 333443
No 433
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=81.23 E-value=1 Score=46.67 Aligned_cols=34 Identities=32% Similarity=0.432 Sum_probs=28.2
Q ss_pred CCCCEEeccCCCCCEEeCC---CCc-EEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDE---DMV-AHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~---~~~-~kl~DfGla~~~ 723 (823)
....++|+|+++.||+++. ++. +.|+||+.+..-
T Consensus 188 ~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 188 YTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp CCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred CCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 5678999999999999987 355 589999988764
No 434
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=80.03 E-value=0.74 Score=48.83 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=27.8
Q ss_pred CCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 691 SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
...++|+|+.+.||+++++..+.|+||+.+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 56899999999999999655679999998875
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=79.58 E-value=1.2 Score=46.52 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=27.2
Q ss_pred CCCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
....++|+|+++.||+++ + .+.|+||+.+..-
T Consensus 193 ~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 193 FTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred CCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 456789999999999999 4 8999999987653
No 436
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=74.82 E-value=2.1 Score=45.52 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=25.8
Q ss_pred CCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 691 SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
...++|+|+++.|||++++. +.++||..|..
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 45799999999999998654 89999988764
No 437
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=74.06 E-value=3.4 Score=43.34 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=29.0
Q ss_pred CCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 691 SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
...++|+|+.+.||+++.++.+.++||+.+..-
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999887754
No 438
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=72.51 E-value=2.9 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=27.8
Q ss_pred CCCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
+...++|+|+.+.||+++.+ .++++||..+..-
T Consensus 225 ~~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G 257 (397)
T 2olc_A 225 SAETLIHGDLHTGSIFASEH-ETKVIDPEFAFYG 257 (397)
T ss_dssp BCCEEECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred CCCceeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence 45789999999999999865 4899999887753
No 439
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=71.57 E-value=2.6 Score=43.18 Aligned_cols=47 Identities=30% Similarity=0.251 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHhh----hcCCCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 674 NLVKIISSSLEYLH----FGHSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 674 niv~~~~~~l~~L~----~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
.....+.++++.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+..
T Consensus 166 ~~~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~~ 216 (288)
T 3d1u_A 166 GDVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAHG 216 (288)
T ss_dssp HHHHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcCC
Confidence 34444455544443 2335789999999999999874 5889999 6654
No 440
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=70.22 E-value=2.3 Score=29.45 Aligned_cols=8 Identities=0% Similarity=-0.558 Sum_probs=3.1
Q ss_pred Hhhhhhhh
Q 045449 590 LKWKLIKC 597 (823)
Q Consensus 590 ~~~~~~r~ 597 (823)
++|.|+|+
T Consensus 32 ~~~~RRR~ 39 (44)
T 2jwa_A 32 GILIKRRQ 39 (44)
T ss_dssp HHHHHHHC
T ss_pred Hhheehhh
Confidence 33444333
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=69.64 E-value=4.5 Score=44.39 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=27.5
Q ss_pred CCCCEEeccCCCCCEEeC-------------------------------------CCCcEEEeecccccc
Q 045449 690 HSIPIIHCDLKPSNVLLD-------------------------------------EDMVAHISDFGIAKL 722 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~-------------------------------------~~~~~kl~DfGla~~ 722 (823)
....++|+|+.+.|||++ +++.+.|+||..|..
T Consensus 288 ~~~v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lIDfEya~~ 357 (458)
T 2qg7_A 288 SPIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGETGEGGEGDSISFIDFEYSCP 357 (458)
T ss_dssp CCEEEECSCCCGGGEEECCC-----------------------------------CCCCEEECCCTTCEE
T ss_pred CCeeEEecCCCCCcEEeecccccccccccccccccccccccccccccccccccCCCCCeEEEEeecCCCC
Confidence 345789999999999998 466799999988764
No 442
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=69.42 E-value=3.6 Score=42.21 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=27.0
Q ss_pred CCCCEEeccCCCCCEEeCCCCcEEEeeccccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDEDMVAHISDFGIAKLL 723 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~~ 723 (823)
....++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 171 ~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 171 LPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred CCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 4457899999999999 55667899999988753
No 443
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=66.65 E-value=3.2 Score=45.22 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=26.5
Q ss_pred CCCCEEeccCCCCCEEeCCC----------------------------CcEEEeecccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDED----------------------------MVAHISDFGIAKL 722 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~----------------------------~~~kl~DfGla~~ 722 (823)
....++|+|+.+.|||++++ ..+.|+||..|..
T Consensus 247 ~~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 247 SPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp CCEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred CCeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 34578999999999999875 6789999988765
No 444
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=64.73 E-value=5.1 Score=41.46 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHHHhh-hcCCCCEEeccCCCCCEEeCCCCcEEEeecc
Q 045449 673 RNLVKIISSSLEYLH-FGHSIPIIHCDLKPSNVLLDEDMVAHISDFG 718 (823)
Q Consensus 673 ~niv~~~~~~l~~L~-~~h~~~ivHrdlk~~NiLl~~~~~~kl~DfG 718 (823)
+.+-+++..+.+.|. +.-.+.++|+|+.+.|++++.++ +.|.||.
T Consensus 187 ~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 187 GNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp SCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 445556666666664 22357899999999999999887 8999984
No 445
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=58.93 E-value=6.3 Score=42.03 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=28.4
Q ss_pred CCCCEEeccCCCCCEEeCCC----CcEEEeecccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDED----MVAHISDFGIAKL 722 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~----~~~kl~DfGla~~ 722 (823)
....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 218 ~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 218 SPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred CCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 44579999999999999876 6899999998875
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=54.40 E-value=8.5 Score=41.29 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=28.5
Q ss_pred CCCCEEeccCCCCCEEeCCC------CcEEEeecccccc
Q 045449 690 HSIPIIHCDLKPSNVLLDED------MVAHISDFGIAKL 722 (823)
Q Consensus 690 h~~~ivHrdlk~~NiLl~~~------~~~kl~DfGla~~ 722 (823)
....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 242 ~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 242 SPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 45678999999999999876 7899999998764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=47.80 E-value=19 Score=38.56 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=25.3
Q ss_pred CEEeccCCCCCEEe------CCCCcEEEeecccccc
Q 045449 693 PIIHCDLKPSNVLL------DEDMVAHISDFGIAKL 722 (823)
Q Consensus 693 ~ivHrdlk~~NiLl------~~~~~~kl~DfGla~~ 722 (823)
.++|+|+.+.|||+ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 45799999999999 4456899999998865
No 448
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=47.68 E-value=12 Score=40.45 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=27.3
Q ss_pred CCCEEeccCCCCCEEeCCCCcEEEeecccccc
Q 045449 691 SIPIIHCDLKPSNVLLDEDMVAHISDFGIAKL 722 (823)
Q Consensus 691 ~~~ivHrdlk~~NiLl~~~~~~kl~DfGla~~ 722 (823)
...++|+|+.+.||+ +.++.+.++||..|..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 457899999999999 7778999999998875
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=33.49 E-value=43 Score=23.15 Aligned_cols=28 Identities=14% Similarity=0.040 Sum_probs=14.4
Q ss_pred eehhHHHHHH-HHHHHHHhhhhhhhcccC
Q 045449 574 IVLPLSTALI-VVVTLTLKWKLIKCWKSR 601 (823)
Q Consensus 574 iv~~~~~~l~-~~~~~~~~~~~~r~~k~~ 601 (823)
|+.++++.++ +++++...|...|+++.+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 3344444333 344455667777765443
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.49 E-value=65 Score=26.63 Aligned_cols=41 Identities=7% Similarity=0.004 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCCEEECCCCcCcCCCchhhhcCCCCcEEecc
Q 045449 91 NIPSSIFNMHTLKLLDFSDNQLFGSLSSFIFNMSSMTTIDLS 132 (823)
Q Consensus 91 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 132 (823)
+-..+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33445555555555555443 222334444455555544443
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=27.73 E-value=57 Score=22.54 Aligned_cols=28 Identities=7% Similarity=-0.050 Sum_probs=14.4
Q ss_pred ehhHHHHHH-HHHHHHHhhhhhhhcccCC
Q 045449 575 VLPLSTALI-VVVTLTLKWKLIKCWKSRT 602 (823)
Q Consensus 575 v~~~~~~l~-~~~~~~~~~~~~r~~k~~~ 602 (823)
+.++++.++ +++++...|...|+++.++
T Consensus 13 A~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 13 AAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 334444333 3444566677777665443
No 452
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=20.92 E-value=86 Score=23.55 Aligned_cols=8 Identities=38% Similarity=0.231 Sum_probs=3.0
Q ss_pred ehhHHHHH
Q 045449 575 VLPLSTAL 582 (823)
Q Consensus 575 v~~~~~~l 582 (823)
+++.++.+
T Consensus 13 vlGg~~~l 20 (70)
T 2klu_A 13 VLGGVAGL 20 (70)
T ss_dssp HHHHHHHH
T ss_pred HHhHHHHH
Confidence 34433333
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.66 E-value=1.5e+02 Score=24.38 Aligned_cols=47 Identities=9% Similarity=0.086 Sum_probs=37.5
Q ss_pred CCccccCcccCCCCCCcEEEccCCCCCCCCCCCCCCCCCCCEEECCCC
Q 045449 63 NLQGTITPQLGNLSSLQTLDLSHNKLSGNIPSSIFNMHTLKLLDFSDN 110 (823)
Q Consensus 63 ~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 110 (823)
.++..-..+|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344444567899999999999865 56577889999999999999865
Done!