BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045450
MASPTAAASGSSSSREGTAKAMVFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKNLLA
KTTMIKNTGQVCIRADASGYFLPRCTCGEWITKCSSSQNCFPAACKYGELPT

High Scoring Gene Products

Symbol, full name Information P value
TOM2B
AT1G32370 		protein from Arabidopsis thaliana 1.8e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045450
        (112 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2033781 - symbol:TOM2B "AT1G32370" species:370...   185  1.8e-14   1


>TAIR|locus:2033781 [details] [associations]
            symbol:TOM2B "AT1G32370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0046786
            "viral replication complex formation and maintenance" evidence=IMP]
            EMBL:CP002684 EMBL:AY088467 IPI:IPI00543093 RefSeq:NP_564397.1
            UniGene:At.40151 PRIDE:Q8L9F1 EnsemblPlants:AT1G32370.2
            GeneID:840129 KEGG:ath:AT1G32370 TAIR:At1g32370
            HOGENOM:HOG000238985 InParanoid:Q8L9F1 OMA:LANMESC PhylomeDB:Q8L9F1
            ProtClustDB:CLSN2688196 Genevestigator:Q8L9F1 GO:GO:0046786
            Uniprot:Q8L9F1
        Length = 131

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 38/53 (71%), Positives = 44/53 (83%)

Query:    18 TAKAMVFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKNLLAKTTMIKNTGQ 70
             TAKA+V DQISQ + ST+NLLHLM+QSS SQ QL KLPKNLLAK ++ K TGQ
Sbjct:    17 TAKAVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQ 69


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.127   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112        99   0.00091  102 3  11 22  0.37    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  119 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.85u 0.12s 10.97t   Elapsed:  00:00:00
  Total cpu time:  10.85u 0.12s 10.97t   Elapsed:  00:00:00
  Start:  Mon May 20 23:00:40 2013   End:  Mon May 20 23:00:40 2013

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