BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045450
         (112 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9ZT63|MTP1_ARATH Metal tolerance protein 1 OS=Arabidopsis thaliana GN=MTP1 PE=1 SV=2
          Length = 398

 Score = 29.6 bits (65), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 27  ISQTIQSTSNLLHLMQQSSPSQVQLTKLPKNLL 59
           +  TI    N+L ++ +S+P ++  TKL K LL
Sbjct: 305 LGTTINMIRNILEVLMESTPREIDATKLEKGLL 337


>sp|B2TPW8|MURQ_CLOBB N-acetylmuramic acid 6-phosphate etherase OS=Clostridium botulinum
           (strain Eklund 17B / Type B) GN=murQ PE=3 SV=1
          Length = 301

 Score = 28.9 bits (63), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 9   SGSSSSREGTAKAMVFDQISQTIQ-STSNLLH-LMQQSSPSQVQLTKLPKNLLAKTT 63
           +GS+  + GTA+ M+ + IS ++      + H LM    P+  +L +  KN++A+ T
Sbjct: 192 TGSTRMKAGTAQKMILNMISTSLMIKKGKVYHNLMVDVQPTNKKLIERSKNIIAECT 248


>sp|C8ZEK4|U507_YEAS8 UPF0507 protein EC1118_1M3_1541g OS=Saccharomyces cerevisiae
           (strain Lalvin EC1118 / Prise de mousse)
           GN=EC1118_1M3_1541g PE=3 SV=1
          Length = 1090

 Score = 28.9 bits (63), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 23  VFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKN 57
           +FD +  T    ++LLH+++ + P  +QLTKL  N
Sbjct: 630 LFDYLDHTDNKGNSLLHVLKTNIPILLQLTKLDIN 664


>sp|A6ZM60|U507_YEAS7 UPF0507 protein SCY_4172 OS=Saccharomyces cerevisiae (strain
           YJM789) GN=SCY_4172 PE=3 SV=1
          Length = 1090

 Score = 28.9 bits (63), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 23  VFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKN 57
           +FD +  T    ++LLH+++ + P  +QLTKL  N
Sbjct: 630 LFDYLDHTDNKGNSLLHVLKTNIPILLQLTKLDIN 664


>sp|C7GLC0|U507_YEAS2 UPF0507 protein C1Q_01007 OS=Saccharomyces cerevisiae (strain
           JAY291) GN=C1Q_01007 PE=3 SV=2
          Length = 1090

 Score = 28.9 bits (63), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 23  VFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKN 57
           +FD +  T    ++LLH+++ + P  +QLTKL  N
Sbjct: 630 LFDYLDHTDNKGNSLLHVLKTNIPILLQLTKLDIN 664


>sp|B3LLP9|U507_YEAS1 UPF0507 protein SCRG_01893 OS=Saccharomyces cerevisiae (strain
           RM11-1a) GN=SCRG_01893 PE=3 SV=1
          Length = 1090

 Score = 28.9 bits (63), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 23  VFDQISQTIQSTSNLLHLMQQSSPSQVQLTKLPKN 57
           +FD +  T    ++LLH+++ + P  +QLTKL  N
Sbjct: 630 LFDYLDHTDNKGNSLLHVLKTNIPILLQLTKLDIN 664


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.123    0.362 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,215,177
Number of Sequences: 539616
Number of extensions: 1061057
Number of successful extensions: 3241
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3233
Number of HSP's gapped (non-prelim): 14
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)