BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045452
(303 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 171 bits (433), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 152/262 (58%), Gaps = 5/262 (1%)
Query: 1 GVLPCGEVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEY 59
G L G ++AVK+L + QG E +F+ EV + + H NL+R+ GFC+ ER+LVY Y
Sbjct: 57 GRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116
Query: 60 MPNKSL-DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG 118
M N S+ C P + LDW KR I G +GL YL ++ IIHRD+KA+NILL
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 176
Query: 119 EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
E+ + + DFGLA++ + V GTIG+I PEY G S K+DVF +GV+LL+
Sbjct: 177 EEFEAVVGDFGLAKLMDYKDXHVXX-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 179 IISGKRLSMLCGI--NENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL 236
+I+G+R L + ++++ +L+ L K K VD L ++ + +++ALL
Sbjct: 236 LITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALL 295
Query: 237 CVQENPNDRPSMLEVSSMLKNE 258
C Q +P +RP M EV ML+ +
Sbjct: 296 CTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 5/262 (1%)
Query: 1 GVLPCGEVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEY 59
G L G ++AVK+L + QG E +F+ EV + + H NL+R+ GFC+ ER+LVY Y
Sbjct: 49 GRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108
Query: 60 MPNKSL-DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG 118
M N S+ C P + LDW KR I G +GL YL ++ IIHRD+KA+NILL
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 119 EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
E+ + + DFGLA++ + V G IG+I PEY G S K+DVF +GV+LL+
Sbjct: 169 EEFEAVVGDFGLAKLMDYKDXHVXX-AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 227
Query: 179 IISGKRLSMLCGI--NENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL 236
+I+G+R L + ++++ +L+ L K K VD L ++ + +++ALL
Sbjct: 228 LITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALL 287
Query: 237 CVQENPNDRPSMLEVSSMLKNE 258
C Q +P +RP M EV ML+ +
Sbjct: 288 CTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 146/252 (57%), Gaps = 4/252 (1%)
Query: 1 GVLPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
GVL G +A+K+ + S+QG EEF+ E+ + +H +L+ ++GFC + E +L+Y+YM
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 61 PNKSLDCYLF-DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
N +L +L+ + + + W++R+ I G +GL YL + IIHRD+K+ NILL E
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDE 174
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+ PKI+DFG+++ + V GT+GYI PEY +G + KSDV+SFGV+L ++
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQ 239
+ + + E +++ E A E G+ + VD L D+ L + + A+ C+
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 240 ENPNDRPSMLEV 251
+ DRPSM +V
Sbjct: 295 LSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 146/252 (57%), Gaps = 4/252 (1%)
Query: 1 GVLPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
GVL G +A+K+ + S+QG EEF+ E+ + +H +L+ ++GFC + E +L+Y+YM
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 61 PNKSLDCYLF-DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
N +L +L+ + + + W++R+ I G +GL YL + IIHRD+K+ NILL E
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDE 174
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+ PKI+DFG+++ + V GT+GYI PEY +G + KSDV+SFGV+L ++
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQ 239
+ + + E +++ E A E G+ + VD L D+ L + + A+ C+
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 240 ENPNDRPSMLEV 251
+ DRPSM +V
Sbjct: 295 LSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 26/261 (9%)
Query: 8 VIAVKKLSK----SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
+AVKKL+ ++ + ++F E+ + AK QH NL+ +LGF D ++ LVY YMPN
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 64 SL----DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
SL C P L W R I +G G+ +L E IHRD+K++NILL E
Sbjct: 116 SLLDRLSCLDGTPP----LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 168
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KISDFGLAR K + ++VGT Y+ PE A +G + KSD++SFGV+LL+I
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 227
Query: 180 ISGKRLSMLCGINEN----LSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIAL 235
I+G L ++E+ L + + +++D ++D +S+ + +A
Sbjct: 228 ITG-----LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVAS 281
Query: 236 LCVQENPNDRPSMLEVSSMLK 256
C+ E N RP + +V +L+
Sbjct: 282 QCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 26/261 (9%)
Query: 8 VIAVKKLSK----SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
+AVKKL+ ++ + ++F E+ + AK QH NL+ +LGF D ++ LVY YMPN
Sbjct: 56 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
Query: 64 SL----DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
SL C P L W R I +G G+ +L E IHRD+K++NILL E
Sbjct: 116 SLLDRLSCLDGTPP----LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 168
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KISDFGLAR K + ++VGT Y+ PE A +G + KSD++SFGV+LL+I
Sbjct: 169 AFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 227
Query: 180 ISGKRLSMLCGINEN----LSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIAL 235
I+G L ++E+ L + + +++D ++D +S+ + +A
Sbjct: 228 ITG-----LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVAS 281
Query: 236 LCVQENPNDRPSMLEVSSMLK 256
C+ E N RP + +V +L+
Sbjct: 282 QCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 26/261 (9%)
Query: 8 VIAVKKLSK----SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
+AVKKL+ ++ + ++F E+ + AK QH NL+ +LGF D ++ LVY YMPN
Sbjct: 50 TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 109
Query: 64 SL----DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
SL C P L W R I +G G+ +L E IHRD+K++NILL E
Sbjct: 110 SLLDRLSCLDGTPP----LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 162
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KISDFGLAR K + ++VGT Y+ PE A +G + KSD++SFGV+LL+I
Sbjct: 163 AFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEI 221
Query: 180 ISGKRLSMLCGINEN----LSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIAL 235
I+G L ++E+ L + + +++D ++D +S+ + +A
Sbjct: 222 ITG-----LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVAS 275
Query: 236 LCVQENPNDRPSMLEVSSMLK 256
C+ E N RP + +V +L+
Sbjct: 276 QCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
Query: 8 VIAVKKLSK----SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
+AVKKL+ ++ + ++F E+ + AK QH NL+ +LGF D ++ LVY Y PN
Sbjct: 47 TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNG 106
Query: 64 SL----DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
SL C P L W R I +G G+ +L E IHRD+K++NILL E
Sbjct: 107 SLLDRLSCLDGTPP----LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDE 159
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KISDFGLAR K + ++VGT Y PE A +G + KSD++SFGV+LL+I
Sbjct: 160 AFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEI 218
Query: 180 ISGKRLSMLCGINEN----LSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIAL 235
I+G L ++E+ L + + +++D +D +S+ + +A
Sbjct: 219 ITG-----LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTS-VEAXYSVAS 272
Query: 236 LCVQENPNDRPSMLEVSSMLK 256
C+ E N RP + +V +L+
Sbjct: 273 QCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 40 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 97
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 153
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 154 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 213 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 251
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 252 EDRPTFDYLRSVLED 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 41 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 98
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 99 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 154
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 155 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 213
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 214 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 252
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 253 EDRPTFDYLRSVLED 267
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 24/250 (9%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 35 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 92
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 93 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 148
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 149 GLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 207
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPS 247
N E + LE Y + + E + +LMR LC +E P DRP+
Sbjct: 208 GMTNPEVIQNLERGYRMVRPDNCPEEL----------YQLMR------LCWKERPEDRPT 251
Query: 248 MLEVSSMLKN 257
+ S+L++
Sbjct: 252 FDYLRSVLED 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 42 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 99
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 100 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 155
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 156 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 214
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 215 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 253
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 254 EDRPTFDYLRSVLED 268
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 40 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 97
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 153
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 154 GLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 213 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 251
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 252 EDRPTFDYLRSVLED 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 49 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 106
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 107 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 162
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 163 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 221
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 222 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 260
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 261 EDRPTFDYLRSVLED 275
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 45 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 102
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 103 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 158
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 159 GLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 217
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 218 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 256
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 257 EDRPTFDYLRSVLED 271
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 40 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 97
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 153
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 154 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 213 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 251
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 252 EDRPTFDYLRSVLED 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 46 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 103
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 104 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 159
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 160 GLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 218
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 219 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 257
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 258 EDRPTFDYLRSVLED 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 40 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 97
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 153
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 154 GLARLIEDAEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 213 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 251
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 252 EDRPTFDYLRSVLED 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 48 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 105
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 106 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 161
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 162 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 220
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 221 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 259
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 260 EDRPTFDYLRSVLED 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 50 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 107
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 108 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 163
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 164 GLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 222
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 223 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 261
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 262 EDRPTFDYLRSVLED 276
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 46 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 103
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHRDL+A+NIL+ + + KI+DF
Sbjct: 104 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADF 159
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 160 GLARLIEDNEXTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 218
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 219 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 257
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 258 EDRPTFDYLRSVLED 272
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 122/250 (48%), Gaps = 21/250 (8%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C +V EYMP +L
Sbjct: 59 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD 117
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
YL + R + +++ I+ + YL+ + IHRDL A N L+GE+ K++D
Sbjct: 118 YLRECNREEVTA-VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVAD 173
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I + +S
Sbjct: 174 FGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT-YGMSP 231
Query: 188 LCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPS 247
GI+ L Y+L + G ME + C + E+ C + +P DRPS
Sbjct: 232 YPGID-----LSQVYDLLEKGYRME--------QPEGCP-PKVYELMRACWKWSPADRPS 277
Query: 248 MLEVSSMLKN 257
E +
Sbjct: 278 FAETHQAFET 287
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 34/255 (13%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK L + S + F E L +LQH L+R+ + E ++ EYM N SL +
Sbjct: 36 VAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDF 93
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L P + L K + + I +G+ +++E + IHR+L+A+NIL+ + + KI+DF
Sbjct: 94 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADF 149
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSML 188
GLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ R+
Sbjct: 150 GLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 208
Query: 189 CGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC-----KLMRCLEIALLCVQENP 242
N E + LE Y + R +C +LMR LC +E P
Sbjct: 209 GMTNPEVIQNLERGYRM---------------VRPDNCPEELYQLMR------LCWKERP 247
Query: 243 NDRPSMLEVSSMLKN 257
DRP+ + S+L++
Sbjct: 248 EDRPTFDYLRSVLED 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 40 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 99 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 208
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 209 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 254
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 255 DRPSFAEIHQAFET 268
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 45 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 104 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 213
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 214 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 259
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 42 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 101 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 210
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 211 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 256
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 257 DRPSFAEIHQAFET 270
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 45 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 104 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 213
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 214 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 259
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 42 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 101 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 210
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 211 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 256
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 257 DRPSFAEIHQAFET 270
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 40 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 99 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 208
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 209 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 254
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 255 DRPSFAEIHQAFET 268
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 40 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 99 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 208
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 209 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 254
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 255 DRPSFAEIHQAFET 268
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 40 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 99 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 208
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 209 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 254
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 255 DRPSFAEIHQAFET 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 40 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 99 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 208
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 209 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 254
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 255 DRPSFAEIHQAFET 268
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 40 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 99 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 208
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 209 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 254
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 255 DRPSFAEIHQAFET 268
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 53 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 111
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 112 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 163
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 164 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 221
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 222 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 267
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 268 DRPSFAEIHQAFET 281
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 45 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 104 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 213
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 214 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 259
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 45 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 104 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 156 KVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 213
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 214 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 259
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 44 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 103 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 154
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 155 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 212
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 213 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 258
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 259 DRPSFAEIHQAFET 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 45 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 103
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 104 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 213
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 214 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 259
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 260 DRPSFAEIHQAFET 273
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 32/262 (12%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
++AVK L +S ++F E L LQH ++++ G C++ + ++V+EYM + L+
Sbjct: 45 LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 68 YL--FDPIRRLI--------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
+L P L+ L + +HI + I G++YL + +HRDL N L+
Sbjct: 105 FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLV 161
Query: 118 GEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
GE++ KI DFG++R +++ + + ++ I ++PPE ++T+SDV+S GV+L
Sbjct: 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWMPPESIMYRKFTTESDVWSLGVVL 220
Query: 177 LQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIAL 235
+I + GK+ NE + + L R +C E+ L
Sbjct: 221 WEIFTYGKQPWYQLSNNEVIECITQGRVL---------------QRPRTCP-QEVYELML 264
Query: 236 LCVQENPNDRPSMLEVSSMLKN 257
C Q P+ R ++ + ++L+N
Sbjct: 265 GCWQREPHMRKNIKGIHTLLQN 286
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 41 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 99
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 100 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 151
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 152 KVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 209
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 210 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 255
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 256 DRPSFAEIHQAFET 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 38 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 97 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 148
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 149 KVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 206
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ + YEL + ME R C + E+ C Q NP+
Sbjct: 207 GMSPYPGIDPS-----QVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 252
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 253 DRPSFAEIHQAFET 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 41 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 99
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 100 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 151
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A I + PE +S KSDV++FGVLL +I +
Sbjct: 152 KVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 209
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 210 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 255
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 256 DRPSFAEIHQAFET 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 42 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 101 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A I + PE +S KSDV++FGVLL +I +
Sbjct: 153 KVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 210
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 211 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 256
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 257 DRPSFAEIHQAFET 270
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 103/180 (57%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + + +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLY 91
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 92 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 146
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 147 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 38 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 96
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 97 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 148
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 149 KVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 206
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ + YEL + ME R C + E+ C Q NP+
Sbjct: 207 GMSPYPGIDPS-----QVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 252
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 253 DRPSFAEIHQAFET 266
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 38 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHRDL A N L+GE+
Sbjct: 97 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 148
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 149 KVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 206
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ + YEL + ME R C + E+ C Q NP+
Sbjct: 207 GMSPYPGIDPS-----QVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 252
Query: 244 DRPSMLEVSSMLKN 257
DRPS E+ +
Sbjct: 253 DRPSFAEIHQAFET 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 22/248 (8%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 95
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L + + KK + I +G+ YL S IIHRDLK++NI L ED KI
Sbjct: 96 HHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIG 150
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R YS +SDV++FG++L ++++G+
Sbjct: 151 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
IN I+E G+G D L S+C R + C+++ +
Sbjct: 211 L--PYSNINNRDQIIEMV------GRGSLSPD--LSKVRSNCP-KRMKRLMAECLKKKRD 259
Query: 244 DRPSMLEV 251
+RPS +
Sbjct: 260 ERPSFPRI 267
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 93
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 94 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 148
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 149 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 96
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 97 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 151
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 152 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 96
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 97 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 151
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 152 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 118
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 119 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 173
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 174 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 91
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 92 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 146
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 147 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 29/248 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 247 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 305
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHR+L A N L+GE+
Sbjct: 306 YLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLV 357
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 358 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 415
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 416 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 461
Query: 244 DRPSMLEV 251
DRPS E+
Sbjct: 462 DRPSFAEI 469
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 119
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 120 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 174
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 175 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 29/248 (11%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 244 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 302
Query: 68 YLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
YL + R+ ++L +++ I+ + YL+ + IHR+L A N L+GE+
Sbjct: 303 YLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLV 354
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
K++DFGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I +
Sbjct: 355 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-Y 412
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
+S GI+ L YEL + ME R C + E+ C Q NP+
Sbjct: 413 GMSPYPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPS 458
Query: 244 DRPSMLEV 251
DRPS E+
Sbjct: 459 DRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 21/249 (8%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + + + EEF E + +++H NL+++LG C ++ E+M +L
Sbjct: 286 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 344
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
YL + R ++ +++ I+ + YL+ + IHR+L A N L+GE+ K++D
Sbjct: 345 YLRE-CNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVAD 400
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGL+R+ ++ A+ I + PE +S KSDV++FGVLL +I + +S
Sbjct: 401 FGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSP 458
Query: 188 LCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPS 247
GI+ L YEL + ME R C + E+ C Q NP+DRPS
Sbjct: 459 YPGID-----LSQVYELLEKDYRME--------RPEGCP-EKVYELMRACWQWNPSDRPS 504
Query: 248 MLEVSSMLK 256
E+ +
Sbjct: 505 FAEIHQAFE 513
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 34/263 (12%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
++AVK L ++S ++F+ E L LQH +++R G C + ++V+EYM + L+
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 68 YL--FDPIRRLI----------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
+L P +L+ L + + + + G++YL + L +HRDL N
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 189
Query: 116 LLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
L+G+ + KI DFG++R I++ + + ++ I ++PPE ++T+SDV+SFGV
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRWMPPESILYRKFTTESDVWSFGV 248
Query: 175 LLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEI 233
+L +I + GK+ E + + EL +R +C I
Sbjct: 249 VLWEIFTYGKQPWYQLSNTEAIDCITQGREL---------------ERPRACP-PEVYAI 292
Query: 234 ALLCVQENPNDRPSMLEVSSMLK 256
C Q P R S+ +V + L+
Sbjct: 293 MRGCWQREPQQRHSIKDVHARLQ 315
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 100
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 101 GSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 265
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 266 MIMTECWNNNVNQRPSFRDLA 286
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 100
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 101 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 265
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 266 MIMTECWNNNVNQRPSFRDLA 286
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 43 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 102
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 103 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 157
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 217 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 267
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 268 MIMTECWNNNVNQRPSFRDLA 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 69 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 129 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 183
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVK-EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 243 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 293
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 294 MIMTECWNNNVNQRPSFRDLA 314
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 34/263 (12%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
++AVK L ++S ++F+ E L LQH +++R G C + ++V+EYM + L+
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 109
Query: 68 YL--FDPIRRLI----------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
+L P +L+ L + + + + G++YL + L +HRDL N
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 166
Query: 116 LLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
L+G+ + KI DFG++R I++ + + ++ I ++PPE ++T+SDV+SFGV
Sbjct: 167 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRWMPPESILYRKFTTESDVWSFGV 225
Query: 175 LLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEI 233
+L +I + GK+ E + + EL +R +C I
Sbjct: 226 VLWEIFTYGKQPWYQLSNTEAIDCITQGREL---------------ERPRACP-PEVYAI 269
Query: 234 ALLCVQENPNDRPSMLEVSSMLK 256
C Q P R S+ +V + L+
Sbjct: 270 MRGCWQREPQQRHSIKDVHARLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 34/263 (12%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
++AVK L ++S ++F+ E L LQH +++R G C + ++V+EYM + L+
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 103
Query: 68 YL--FDPIRRLI----------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
+L P +L+ L + + + + G++YL + L +HRDL N
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 160
Query: 116 LLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
L+G+ + KI DFG++R I++ + + ++ I ++PPE ++T+SDV+SFGV
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML-PIRWMPPESILYRKFTTESDVWSFGV 219
Query: 175 LLLQIIS-GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEI 233
+L +I + GK+ E + + EL +R +C I
Sbjct: 220 VLWEIFTYGKQPWYQLSNTEAIDCITQGREL---------------ERPRACP-PEVYAI 263
Query: 234 ALLCVQENPNDRPSMLEVSSMLK 256
C Q P R S+ +V + L+
Sbjct: 264 MRGCWQREPQQRHSIKDVHARLQ 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 36 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 95
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 96 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 150
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVK-EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 210 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 260
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 261 MIMTECWNNNVNQRPSFRDLA 281
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 98 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 212 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 262
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 263 MIMTECWNNNVNQRPSFRDLA 283
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 44 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 103
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 104 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 158
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 218 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 268
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 269 MIMTECWNNNVNQRPSFRDLA 289
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 98 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 212 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 262
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 263 MIMTECWNNNVNQRPSFRDLA 283
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 38 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 98 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 212 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 262
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 263 MIMTECWNNNVNQRPSFRDLA 283
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 37 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 96
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 97 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 151
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 211 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 261
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 262 MIMTECWNNNVNQRPSFRDLA 282
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 42 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 101
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 102 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 156
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVK-EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 216 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 266
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 267 MIMTECWNNNVNQRPSFRDLA 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 45 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 104
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 105 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 159
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 219 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 269
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 270 MIMTECWNNNVNQRPSFRDLA 290
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 116 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 230 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 280
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 281 MIMTECWNNNVNQRPSFRDLA 301
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 116 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 230 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 280
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 281 MIMTECWNNNVNQRPSFRDLA 301
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 22/248 (8%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + + +V ++ SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLY 107
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L + + KK + I +G+ YL S IIHRDLK++NI L ED KI
Sbjct: 108 HHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIG 162
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA ++ S EQ+ G+I ++ PE R YS +SDV++FG++L ++++G+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
IN I+E G+G D L S+C R + C+++ +
Sbjct: 223 L--PYSNINNRDQIIEMV------GRGSLSPD--LSKVRSNCP-KRMKRLMAECLKKKRD 271
Query: 244 DRPSMLEV 251
+RPS +
Sbjct: 272 ERPSFPRI 279
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 102/188 (54%), Gaps = 18/188 (9%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
++AVK L + ++F+ E L LQH ++++ G C D + ++V+EYM + L+
Sbjct: 47 LVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNK 106
Query: 68 YL--FDPIRRLILDWKKR-----------VHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
+L P +++D + R +HI I G++YL + +HRDL N
Sbjct: 107 FLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRN 163
Query: 115 ILLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
L+G ++ KI DFG++R +++ + + ++ I ++PPE ++T+SDV+SFG
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML-PIRWMPPESIMYRKFTTESDVWSFG 222
Query: 174 VLLLQIIS 181
V+L +I +
Sbjct: 223 VILWEIFT 230
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 22/248 (8%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 107
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L + + KK + I +G+ YL S IIHRDLK++NI L ED KI
Sbjct: 108 HHLHASETKFEM--KKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIG 162
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA ++ S EQ+ G+I ++ PE R YS +SDV++FG++L ++++G+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 184 RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPN 243
IN I+E G+G D L S+C R + C+++ +
Sbjct: 223 L--PYSNINNRDQIIEMV------GRGSLSPD--LSKVRSNCP-KRMKRLMAECLKKKRD 271
Query: 244 DRPSMLEV 251
+RPS +
Sbjct: 272 ERPSFPRI 279
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 119
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 120 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 174
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 175 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 111
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 112 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 166
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 167 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVKKL--SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + + Q + FKNEV + K +HVN++ +G+ + +V ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 91
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L I + K + I QG+ YL S IIHRDLK++NI L ED+ KI
Sbjct: 92 HHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIG 146
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA ++ S EQ+ G+I ++ PE R + YS +SDV++FG++L ++++G+
Sbjct: 147 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 28/243 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K + + A E+F E + KL H L+++ G C++ LV+E+M + L Y
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L +R + + + + + +G+ YL+E S +IHRDL A N L+GE+ K+SDF
Sbjct: 93 L--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDF 147
Query: 129 GLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
G+ R + ++T GT + + PE YS+KSDV+SFGVL+ ++ S ++
Sbjct: 148 GMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
EN S E ++ G + R +S + +I C +E P DR
Sbjct: 204 PY-----ENRSNSEVVEDISTGFR-------LYKPRLASTHV---YQIMNHCWKERPEDR 248
Query: 246 PSM 248
P+
Sbjct: 249 PAF 251
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ E++P
Sbjct: 41 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPY 100
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHRDL NIL+ + +
Sbjct: 101 GSLREYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 265
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 266 MIMTECWNNNVNQRPSFRDLA 286
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GEV+AVKKL S+ + +F+ E+ + LQH N+++ G C + R L+ EY+P
Sbjct: 39 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 98
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R +D K + I +G+ YL IHR+L NIL+ + +
Sbjct: 99 GSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENR 153
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL ++ KE K E I + PE + +S SDV+SFGV+L ++
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKV-KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
Query: 181 S---------GKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCL 231
+ + + M+ + I+ H EL K + D D+
Sbjct: 213 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE---------IY 263
Query: 232 EIALLCVQENPNDRPSMLEVS 252
I C N N RPS +++
Sbjct: 264 MIMTECWNNNVNQRPSFRDLA 284
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 28/243 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K + + A E+F E + KL H L+++ G C++ LV+E+M + L Y
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L +R + + + + + +G+ YL+E +IHRDL A N L+GE+ K+SDF
Sbjct: 93 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 147
Query: 129 GLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
G+ R + ++T GT + + PE YS+KSDV+SFGVL+ ++ S ++
Sbjct: 148 GMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
EN S E ++ G + R +S + +I C +E P DR
Sbjct: 204 PY-----ENRSNSEVVEDISTGFR-------LYKPRLASTHV---YQIMNHCWKERPEDR 248
Query: 246 PSM 248
P+
Sbjct: 249 PAF 251
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 28/243 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K + + A E+F E + KL H L+++ G C++ LV+E+M + L Y
Sbjct: 37 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L +R + + + + + +G+ YL+E +IHRDL A N L+GE+ K+SDF
Sbjct: 96 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 150
Query: 129 GLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
G+ R + ++T GT + + PE YS+KSDV+SFGVL+ ++ S ++
Sbjct: 151 GMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
EN S E ++ G + R +S + +I C +E P DR
Sbjct: 207 PY-----ENRSNSEVVEDISTGFR-------LYKPRLASTHV---YQIMNHCWRERPEDR 251
Query: 246 PSM 248
P+
Sbjct: 252 PAF 254
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 28/243 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K + + A E+F E + KL H L+++ G C++ LV+E+M + L Y
Sbjct: 32 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L +R + + + + + +G+ YL+E +IHRDL A N L+GE+ K+SDF
Sbjct: 91 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 145
Query: 129 GLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
G+ R + ++T GT + + PE YS+KSDV+SFGVL+ ++ S ++
Sbjct: 146 GMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
EN S E ++ G + R +S + +I C +E P DR
Sbjct: 202 PY-----ENRSNSEVVEDISTGFR-------LYKPRLASTHV---YQIMNHCWKERPEDR 246
Query: 246 PSM 248
P+
Sbjct: 247 PAF 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGLAR+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL-DC 67
+AVK L K + F E L LQH L+R+ E ++ EYM SL D
Sbjct: 40 VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDF 98
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
D +++L K + I +G+ Y++ R IHRDL+A+N+L+ E + KI+D
Sbjct: 99 LKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIAD 153
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A E I + PE G ++ KSDV+SFG+LL +I++ ++
Sbjct: 154 FGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
Query: 188 LCGINEN-LSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRP 246
N + ++ L Y M V++ D+ +I +C +E +RP
Sbjct: 213 PGRTNADVMTALSQGYR-------MPRVENCPDE---------LYDIMKMCWKEKAEERP 256
Query: 247 SMLEVSSMLKN 257
+ + S+L +
Sbjct: 257 TFDYLQSVLDD 267
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 123/259 (47%), Gaps = 28/259 (10%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HRDL A N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+ R + + + + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCVQ 239
S+ E Y+ + ++FV D D+ +C R ++ +C Q
Sbjct: 227 ---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQ 270
Query: 240 ENPNDRPSMLEVSSMLKNE 258
NPN RP+ LE+ ++LK++
Sbjct: 271 FNPNMRPTFLEIVNLLKDD 289
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 30/260 (11%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 103 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 158
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
D KI DFG+ R + + + + ++ PE + GV++T SDV+SFGV+L +I
Sbjct: 159 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCV 238
++ E Y+ + + FV + L D+ +C M LE+ +C
Sbjct: 219 A---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCW 262
Query: 239 QENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 263 QYNPKMRPSFLEIISSIKEE 282
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 120
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 238 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 137
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 138 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 255 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 292
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 28/243 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K + K + ++F E + KL H L+++ G C++ LV+E+M + L Y
Sbjct: 54 VAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L +R + + + + + +G+ YL+E +IHRDL A N L+GE+ K+SDF
Sbjct: 113 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 167
Query: 129 GLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
G+ R + ++T GT + + PE YS+KSDV+SFGVL+ ++ S ++
Sbjct: 168 GMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
EN S E ++ G + R +S + +I C +E P DR
Sbjct: 224 PY-----ENRSNSEVVEDISTGFR-------LYKPRLASTHV---YQIMNHCWKERPEDR 268
Query: 246 PSM 248
P+
Sbjct: 269 PAF 271
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +KL H N++R +G + S R ++ E M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 241 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 282
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 283 WQHQPEDRPNF 293
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +KL H N++R +G + S R ++ E M L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 255 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 296
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 297 WQHQPEDRPNF 307
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 28/252 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 36 VAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLD 92
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L D R L V + + G+ Y++ R+ IHRDL+++NIL+G + KI+D
Sbjct: 93 FLKDGEGR-ALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIAD 148
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++++ R+
Sbjct: 149 FGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP- 206
Query: 188 LCGIN--ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
G+N E L +E Y + C + E+ + C +++P +R
Sbjct: 207 YPGMNNREVLEQVERGYRM---------------PCPQDCPI-SLHELMIHCWKKDPEER 250
Query: 246 PSMLEVSSMLKN 257
P+ + S L++
Sbjct: 251 PTFEYLQSFLED 262
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 34 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 90
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 91 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 146
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 147 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 205
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 206 PGMVNREVLDQVERGYRM 223
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 28/243 (11%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K + + A E+F E + KL H L+++ G C++ LV E+M + L Y
Sbjct: 35 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
L +R + + + + + +G+ YL+E +IHRDL A N L+GE+ K+SDF
Sbjct: 94 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 148
Query: 129 GLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
G+ R + ++T GT + + PE YS+KSDV+SFGVL+ ++ S ++
Sbjct: 149 GMTRFVLDDQYTSST----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
EN S E ++ G + R +S + +I C +E P DR
Sbjct: 205 PY-----ENRSNSEVVEDISTGFR-------LYKPRLASTHV---YQIMNHCWRERPEDR 249
Query: 246 PSM 248
P+
Sbjct: 250 PAF 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 36 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 92
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 93 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 148
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 149 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 208 PGMVNREVLDQVERGYRM 225
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 116/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V EYM N SLD +L + + +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQL 147
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 148 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 265 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 302
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 38 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 94
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 95 FLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 150
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 151 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 210 PGMVNREVLDQVERGYRM 227
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVCEYMSKGSLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 267
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 268 FLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 324 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 383 PGMVNREVLDQVERGYRM 400
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 294 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 350
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 351 FLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 406
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 407 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 466 PGMVNREVLDQVERGYRM 483
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 35 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIXIVTEYMSKGSLLD 91
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 92 FLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 147
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 148 FGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 206
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 207 PGMVNREVLDQVERGYRM 224
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 267
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 268 FLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 324 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 383 PGMVNREVLDQVERGYRM 400
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + K++H L+++ + + SEE + +V EYM SL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+I + G S+ M+V EYM N SLD +L + + +
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQL 126
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI+ G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 127 VGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G+++ +++S G+R + + +E
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L S +D + +LM L C Q+ N RP E+ +ML
Sbjct: 244 YRL----------PSPMDCPAALYQLM------LDCWQKERNSRPKFDEIVNML 281
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 25/251 (9%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL-DC 67
+AVK L K + F E L LQH L+R+ E ++ E+M SL D
Sbjct: 39 VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDF 97
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
D +++L K + I +G+ Y++ R IHRDL+A+N+L+ E + KI+D
Sbjct: 98 LKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIAD 152
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A E I + PE G ++ KS+V+SFG+LL +I++ ++
Sbjct: 153 FGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
Query: 188 LCGINEN-LSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRP 246
N + +S L Y + R +C +I +C +E +RP
Sbjct: 212 PGRTNADVMSALSQGYRM---------------PRMENCP-DELYDIMKMCWKEKAEERP 255
Query: 247 SMLEVSSMLKN 257
+ + S+L +
Sbjct: 256 TFDYLQSVLDD 266
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 112 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 167
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
D KI DFG+ R + + + + ++ PE + GV++T SDV+SFGV+L +I
Sbjct: 168 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCV 238
++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 228 A---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCW 271
Query: 239 QENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 272 QYNPKMRPSFLEIISSIKEE 291
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 122
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 179
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 240 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 281
Query: 238 VQENPNDRPS 247
Q P DRP+
Sbjct: 282 WQHQPEDRPN 291
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVGEYMSKGSLLD 267
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 268 FLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 323
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 324 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 383 PGMVNREVLDQVERGYRM 400
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKS 137
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 255 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 296
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 297 WQHQPEDRPNF 307
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 99 FLKGETGKY-LRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 155 FGLARLIEDNEWTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 214 PGMVNREVLDQVERGYRM 231
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 123 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 179
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 240 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 281
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 282 WQHQPEDRPNF 292
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 115 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 171
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 172 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 232 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 273
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 274 WQHQPEDRPNF 284
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 68 YLFDPIRRLILD--------WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +R + + K + + I G+ YL +HRDL A N ++ E
Sbjct: 108 YLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 163
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 164 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 222
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 223 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 266
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 267 WQYNPKMRPSFLEIISSIKEE 287
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 129
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 130 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 186
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 187 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 247 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 288
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 289 WQHQPEDRPNF 299
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 68 YLFDPIRRLILD--------WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +R + + K + + I G+ YL +HRDL A N ++ E
Sbjct: 118 YLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 173
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 232
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 233 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 276
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 277 WQYNPKMRPSFLEIISSIKEE 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 140 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 196
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 197 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 257 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 298
Query: 238 VQENPNDRPS 247
Q P DRP+
Sbjct: 299 WQHQPEDRPN 308
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 181 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 241 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 282
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 283 WQHQPEDRPNF 293
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLD 98
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 99 FLKGETGKY-LRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 154
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 155 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 214 PGMVNREVLDQVERGYRM 231
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 9 IAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK K+ + + F+ F+NEV + K +HVN++ +G+ + + +V ++ SL
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLY 119
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L ++ + + I QG+ YL + IIHRD+K++NI L E + KI
Sbjct: 120 KHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIG 174
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYAR---QGVYSTKSDVFSFGVLLLQIISGK 183
DFGLA + ++ S EQ G++ ++ PE R +S +SDV+S+G++L ++++G+
Sbjct: 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + +F +E + + H N+IR+ G M+V EYM N SLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + + V ++ G+ G+ YL S L +HRDL A N+L+ ++ K+SD
Sbjct: 140 FLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIP-----PEYARQGVYSTKSDVFSFGVLLLQIIS- 181
FGL+R+ + A T T G IP PE +S+ SDV+SFGV++ ++++
Sbjct: 195 FGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 182 GKRLSMLCGINENLSILEHAYEL 204
G+R + +S +E Y L
Sbjct: 251 GERPYWNMTNRDVISSVEEGYRL 273
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 128/277 (46%), Gaps = 52/277 (18%)
Query: 8 VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
++AVK L + +SA +F+ E L A+ + N++++LG C + L++EYM L+
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 67 CYL--FDP-----IRRLILDWKKRVH--------------IIEGITQGLLYLQEYSRLTI 105
+L P + L + RV I + G+ YL E
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKF 195
Query: 106 IHRDLKASNILLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
+HRDL N L+GE+M KI+DFGL+R I++ + KA+ + I ++PPE Y+
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI-PIRWMPPESIFYNRYT 254
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN-- 222
T+SDV+++GV+L +I S L+ Y G E V ++ D N
Sbjct: 255 TESDVWAYGVVLWEIFSYG--------------LQPYY-----GMAHEEVIYYVRDGNIL 295
Query: 223 ---SSCKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 256
+C L + LC + P DRPS + +L+
Sbjct: 296 ACPENCPL-ELYNLMRLCWSKLPADRPSFCSIHRILQ 331
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 149
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 150 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 206
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 207 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 267 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 308
Query: 238 VQENPNDRPS 247
Q P DRP+
Sbjct: 309 WQHQPEDRPN 318
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM L
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVMEYMSKGCLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 138 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 194
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 195 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 255 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 296
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 297 WQHQPEDRPNF 307
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 105 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 160
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 220 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 263
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 264 WQYNPKMRPSFLEIISSIKEE 284
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM L
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGCLLD 101
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 102 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 157
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGLAR+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 158 FGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 217 PGMVNREVLDQVERGYRM 234
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 109 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 164
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 165 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 223
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 224 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 267
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 268 WQYNPKMRPSFLEIISSIKEE 288
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 111 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 166
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 225
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 226 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 269
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 270 WQYNPKMRPSFLEIISSIKEE 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N + E
Sbjct: 105 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAE 160
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M LE+ +C
Sbjct: 220 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMC 263
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 264 WQYNPKMRPSFLEIISSIKEE 284
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HRDL A N ++ D
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 163
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+ R + + + + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCVQ 239
S+ E Y+ + ++FV D D+ +C R ++ +C Q
Sbjct: 224 ---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQ 267
Query: 240 ENPNDRPSMLEVSSMLKNE 258
NP RP+ LE+ ++LK++
Sbjct: 268 FNPKMRPTFLEIVNLLKDD 286
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 140 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 195
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 196 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 254
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 255 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 298
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 299 WQYNPKMRPSFLEIISSIKEE 319
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + +F +E + + H N+IR+ G M+V EYM N SLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + + V ++ G+ G+ YL S L +HRDL A N+L+ ++ K+SD
Sbjct: 140 FLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIP-----PEYARQGVYSTKSDVFSFGVLLLQIIS- 181
FGL+R+ + A T T G IP PE +S+ SDV+SFGV++ ++++
Sbjct: 195 FGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 182 GKRLSMLCGINENLSILEHAYEL 204
G+R + +S +E Y L
Sbjct: 251 GERPYWNMTNRDVISSVEEGYRL 273
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 32/261 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 112 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 167
Query: 120 DMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
D KI DFG+ R I+ + + + ++ + ++ PE + GV++T SDV+SFGV+L +
Sbjct: 168 DFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLC 237
I ++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 227 IA---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMC 270
Query: 238 VQENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 271 WQYNPKMRPSFLEIISSIKEE 291
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 111 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 166
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
D KI DFG+ R + + + + ++ PE + GV++T SDV+SFGV+L +I
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCV 238
++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 227 A---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCW 270
Query: 239 QENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 271 QYNPKMRPSFLEIISSIKEE 290
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKSLDC 67
+A+K L K E F E + KL+H L+++ + + SEE + +V EYM SL
Sbjct: 212 VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLD 268
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + L + V + I G+ Y++ R+ +HRDL+A+NIL+GE++ K++D
Sbjct: 269 FLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVAD 324
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSM 187
FGL R+ A + I + PE A G ++ KSDV+SFG+LL ++ + R+
Sbjct: 325 FGLGRLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383
Query: 188 LCGIN-ENLSILEHAYEL 204
+N E L +E Y +
Sbjct: 384 PGMVNREVLDQVERGYRM 401
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HRDL A N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+ R + + + + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCVQ 239
S+ E Y+ + ++FV D D+ +C R ++ +C Q
Sbjct: 227 ---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQ 270
Query: 240 ENPNDRPSMLEVSSMLKNE 258
NP RP+ LE+ ++LK++
Sbjct: 271 FNPKMRPTFLEIVNLLKDD 289
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 6 GEVIAVKKLSKSS--AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G +AVK L + A+ EF EV + +L+H N++ +G +V EY+
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L R LD ++R+ + + +G+ YL + I+HRDLK+ N+L+ +
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTV 178
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K+ DFGL+R+ A L ++ GT ++ PE R + KSDV+SFGV+L ++ +
Sbjct: 179 KVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K ++++++ EF NE + + +++R+LG + +++ E M L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 68 YLF--------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
YL +P+ K + + I G+ YL +HRDL A N ++ E
Sbjct: 118 YLRSLRPEMENNPVL-APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 173
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
D KI DFG+ R + + + + ++ PE + GV++T SDV+SFGV+L +I
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCV 238
++ E Y+ + + FV + L D+ +C M E+ +C
Sbjct: 234 A---------------TLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCW 277
Query: 239 QENPNDRPSMLEVSSMLKNE 258
Q NP RPS LE+ S +K E
Sbjct: 278 QYNPKMRPSFLEIISSIKEE 297
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 30/260 (11%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HR+L A N ++ D
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHD 167
Query: 121 MKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI DFG+ R I+ + + + ++ + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCV 238
S+ E Y+ + ++FV D D+ +C R ++ +C
Sbjct: 227 T---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCW 270
Query: 239 QENPNDRPSMLEVSSMLKNE 258
Q NPN RP+ LE+ ++LK++
Sbjct: 271 QFNPNMRPTFLEIVNLLKDD 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 28/259 (10%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HR+L A N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHD 166
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+ R + + + + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCVQ 239
S+ E Y+ + ++FV D D+ +C R ++ +C Q
Sbjct: 227 ---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQ 270
Query: 240 ENPNDRPSMLEVSSMLKNE 258
NPN RP+ LE+ ++LK++
Sbjct: 271 FNPNMRPTFLEIVNLLKDD 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 28/259 (10%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HRDL A N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+ R + + + + + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 167 FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCVQ 239
S+ E Y+ + ++FV D D+ +C R ++ +C Q
Sbjct: 227 ---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQ 270
Query: 240 ENPNDRPSMLEVSSMLKNE 258
NP RP+ LE+ ++LK++
Sbjct: 271 FNPKMRPTFLEIVNLLKDD 289
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 141 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 197
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 198 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 258 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 299
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 300 WQHQPEDRPNF 310
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 164 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 220
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+AR + + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 281 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 322
Query: 238 VQENPNDRPS 247
Q P DRP+
Sbjct: 323 WQHQPEDRPN 332
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 30/260 (11%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HRDL A N ++ D
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 165
Query: 121 MKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI DFG+ R I+ + + + ++ + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
Query: 180 ISGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCV 238
S+ E Y+ + ++FV D D+ +C R ++ +C
Sbjct: 225 T---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCW 268
Query: 239 QENPNDRPSMLEVSSMLKNE 258
Q NP RP+ LE+ ++LK++
Sbjct: 269 QFNPKMRPTFLEIVNLLKDD 288
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 9 IAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK L + ++ E +F E ++ +K H N++R +G + S R ++ E M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 68 YLFD----PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GED 120
+L + P + L +H+ I G YL+E IHRD+ A N LL G
Sbjct: 124 FLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPG 180
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+A+ + S + + ++PPE +G++++K+D +SFGVLL +I
Sbjct: 181 RVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDS---FLDDRNSSCKLMRCLEIALLC 237
S + N+ + +EFV S +N + R I C
Sbjct: 241 SLGYMPYPSKSNQEV---------------LEFVTSGGRMDPPKNCPGPVYR---IMTQC 282
Query: 238 VQENPNDRPSM 248
Q P DRP+
Sbjct: 283 WQHQPEDRPNF 293
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V E M N SLD +L + + +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQL 120
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 238 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V E M N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 28/259 (10%)
Query: 9 IAVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK +++S++ + EF NE + +++R+LG + ++V E M + L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 68 YLF-------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
YL + R ++ + + I G+ YL +HRDL A N ++ D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHD 166
Query: 121 MKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFG+ R + + + + ++ PE + GV++T SD++SFGV+L +I
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 181 SGKRLSMLCGINENLSILEHAYELWKGGKGMEFV-DSFLDDRNSSCKLMRCLEIALLCVQ 239
S+ E Y+ + ++FV D D+ +C R ++ +C Q
Sbjct: 227 ---------------SLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQ 270
Query: 240 ENPNDRPSMLEVSSMLKNE 258
NP RP+ LE+ ++LK++
Sbjct: 271 FNPKMRPTFLEIVNLLKDD 289
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 6 GEVIAVKKLSKSS--AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G +AVK L + A+ EF EV + +L+H N++ +G +V EY+
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L R LD ++R+ + + +G+ YL + I+HR+LK+ N+L+ +
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTV 178
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K+ DFGL+R+ K S +++ GT ++ PE R + KSDV+SFGV+L ++ +
Sbjct: 179 KVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 23/234 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G S+ M+V E M N SLD +L + + +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL S + +HRDL A NIL+ ++ K+SDFGL+R+ + A T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 144 EQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLSILEHA 201
+ I + PE +++ SDV+S+G++L +++S G+R + + ++
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
Y L +D + +LM L C Q++ N+RP ++ S+L
Sbjct: 267 YRL----------PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + +F +E + + H N+I + G + M++ EYM N SLD
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L R + + V ++ GI G+ YL S ++ +HRDL A NIL+ ++ K+SD
Sbjct: 120 FLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSD 174
Query: 128 FGLARIFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRL 185
FG++R+ + A T + I + PE +++ SDV+S+G+++ +++S G+R
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
+ + +E Y L C + ++ L C Q+ +DR
Sbjct: 235 YWDMSNQDVIKAIEEGYRL---------------PPPMDCPIA-LHQLMLDCWQKERSDR 278
Query: 246 PSMLEVSSML 255
P ++ +ML
Sbjct: 279 PKFGQIVNML 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 28/253 (11%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + EF +E + + +H N+IR+ G +S M++ E+M N +LD
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 68 YL-FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L + + ++ + V ++ GI G+ YL E ++ +HRDL A NIL+ ++ K+S
Sbjct: 105 FLRLNDGQFTVI---QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVS 158
Query: 127 DFGLARIFAKESLKANTEQVVG---TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-G 182
DFGL+R + S +G I + PE +++ SD +S+G+++ +++S G
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 183 KRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENP 242
+R + ++ +E Y L D S +LM L C Q++
Sbjct: 219 ERPYWDMSNQDVINAIEQDYRL----------PPPPDCPTSLHQLM------LDCWQKDR 262
Query: 243 NDRPSMLEVSSML 255
N RP +V S L
Sbjct: 263 NARPRFPQVVSAL 275
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 28/253 (11%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + EF +E + + +H N+IR+ G +S M++ E+M N +LD
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 68 YL-FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L + + ++ + V ++ GI G+ YL E ++ +HRDL A NIL+ ++ K+S
Sbjct: 107 FLRLNDGQFTVI---QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVS 160
Query: 127 DFGLARIFAKESLKANTEQVVG---TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-G 182
DFGL+R + S +G I + PE +++ SD +S+G+++ +++S G
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 183 KRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENP 242
+R + ++ +E Y L D S +LM L C Q++
Sbjct: 221 ERPYWDMSNQDVINAIEQDYRL----------PPPPDCPTSLHQLM------LDCWQKDR 264
Query: 243 NDRPSMLEVSSML 255
N RP +V S L
Sbjct: 265 NARPRFPQVVSAL 277
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L S + + +F +E + + H N+I + G S M++ E+M N SLD
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + + V ++ GI G+ YL + + +HRDL A NIL+ ++ K+SD
Sbjct: 124 FLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSD 178
Query: 128 FGLARIFAKESLKANTEQVVG---TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GK 183
FGL+R ++ +G I + PE + +++ SDV+S+G+++ +++S G+
Sbjct: 179 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 184 RLSMLCGINENLSILEHAYEL-----WKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCV 238
R + ++ +E Y L +D + DRN K + + L +
Sbjct: 239 RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN-TLDKM 297
Query: 239 QENPNDRPSMLEVSS 253
NPN +M +SS
Sbjct: 298 IRNPNSLKAMAPLSS 312
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 28/194 (14%)
Query: 6 GEVIAVKKLSKSS----AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM- 60
G+ +AVK +Q E + E L A L+H N+I + G C+ LV E+
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 61 --P-NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
P N+ L P ++++W + I +G+ YL + + + IIHRDLK+SNIL+
Sbjct: 90 GGPLNRVLSGKRIPP--DILVNWAVQ------IARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 118 GEDMKP--------KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
+ ++ KI+DFGLAR E + G ++ PE R ++S SDV
Sbjct: 142 LQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDV 197
Query: 170 FSFGVLLLQIISGK 183
+S+GVLL ++++G+
Sbjct: 198 WSYGVLLWELLTGE 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + +F +E + + H N+I + G + M++ EYM N SLD
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L R + + V ++ GI G+ YL S ++ +HRDL A NIL+ ++ K+SD
Sbjct: 105 FLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSD 159
Query: 128 FGLARIFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRL 185
FG++R+ + A T + I + PE +++ SDV+S+G+++ +++S G+R
Sbjct: 160 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
+ + +E Y L C + ++ L C Q+ +DR
Sbjct: 220 YWDMSNQDVIKAIEEGYRL---------------PPPMDCPIA-LHQLMLDCWQKERSDR 263
Query: 246 PSMLEVSSML 255
P ++ +ML
Sbjct: 264 PKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 24/250 (9%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + +F +E + + H N+I + G + M++ EYM N SLD
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L R + + V ++ GI G+ YL S ++ +HRDL A NIL+ ++ K+SD
Sbjct: 99 FLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSD 153
Query: 128 FGLARIFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRL 185
FG++R+ + A T + I + PE +++ SDV+S+G+++ +++S G+R
Sbjct: 154 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
Query: 186 SMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDR 245
+ + +E Y L C + ++ L C Q+ +DR
Sbjct: 214 YWDMSNQDVIKAIEEGYRL---------------PPPMDCPIA-LHQLMLDCWQKERSDR 257
Query: 246 PSMLEVSSML 255
P ++ +ML
Sbjct: 258 PKFGQIVNML 267
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 42/273 (15%)
Query: 8 VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + +S + +E + ++ H ++I++ G C +L+ EY SL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 67 CYLFDPIR-------------RLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTI 105
+L + + LD + G I+QG+ YL E +++
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSL 171
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
+HRDL A NIL+ E K KISDFGL+R +E Q + ++ E +Y+T
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 166 KSDVFSFGVLLLQIISGKRLSMLCGINENLSI-LEHAYELWKGGKGMEFVDSFLDDRNSS 224
+SDV+SFGVLL +I++ G N I E + L K G ME D N S
Sbjct: 232 QSDVWSFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPD------NCS 278
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 257
++ R + L C ++ P+ RP ++S L+
Sbjct: 279 EEMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 124/273 (45%), Gaps = 42/273 (15%)
Query: 8 VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + +S + +E + ++ H ++I++ G C +L+ EY SL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 67 CYLFDPIR-------------RLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTI 105
+L + + LD + G I+QG+ YL E + +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKL 171
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
+HRDL A NIL+ E K KISDFGL+R +E Q + ++ E +Y+T
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 166 KSDVFSFGVLLLQIISGKRLSMLCGINENLSI-LEHAYELWKGGKGMEFVDSFLDDRNSS 224
+SDV+SFGVLL +I++ G N I E + L K G ME D N S
Sbjct: 232 QSDVWSFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPD------NCS 278
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 257
++ R + L C ++ P+ RP ++S L+
Sbjct: 279 EEMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 41/251 (16%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV+A+KK+S S Q E++++ EV KL+H N I+ G + LV EY
Sbjct: 41 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS 100
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ D + + L + + G QGL YL ++ +IHRD+KA NILL E
Sbjct: 101 ASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 154
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGVLLLQII 180
K+ DFG A I A AN VGT ++ PE +G Y K DV+S G+ +++
Sbjct: 155 KLGDFGSASIMA----PANX--FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL- 207
Query: 181 SGKRLSMLCGINENLSILEHAYE----LWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL 236
+R L +N +S L H + + G E+ +F+D
Sbjct: 208 -AERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDS---------------- 249
Query: 237 CVQENPNDRPS 247
C+Q+ P DRP+
Sbjct: 250 CLQKIPQDRPT 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 41/251 (16%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV+A+KK+S S Q E++++ EV KL+H N I+ G + LV EY
Sbjct: 80 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS 139
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ D + + L + + G QGL YL ++ +IHRD+KA NILL E
Sbjct: 140 ASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 193
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGVLLLQII 180
K+ DFG A I A AN VGT ++ PE +G Y K DV+S G+ +++
Sbjct: 194 KLGDFGSASIMA----PANX--FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL- 246
Query: 181 SGKRLSMLCGINENLSILEHAYE----LWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL 236
+R L +N +S L H + + G E+ +F+D
Sbjct: 247 -AERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDS---------------- 288
Query: 237 CVQENPNDRPS 247
C+Q+ P DRP+
Sbjct: 289 CLQKIPQDRPT 299
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 8 VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L + +S + +E + ++ H ++I++ G C +L+ EY SL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 67 CYL---------------------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTI 105
+L D L + I+QG+ YL E + +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKL 171
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
+HRDL A NIL+ E K KISDFGL+R +E Q + ++ E +Y+T
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 166 KSDVFSFGVLLLQIISGKRLSMLCGINENLSI-LEHAYELWKGGKGMEFVDSFLDDRNSS 224
+SDV+SFGVLL +I++ G N I E + L K G ME D N S
Sbjct: 232 QSDVWSFGVLLWEIVT-------LGGNPYPGIPPERLFNLLKTGHRMERPD------NCS 278
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 257
++ R + L C ++ P+ RP ++S L+
Sbjct: 279 EEMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 6 GEVIAVKKLSKSS---AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +A+K + K + A + +NEV + +L+H +++ + + DS LV E N
Sbjct: 36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
++ YL + ++ + + H + I G+LYL + I+HRDL SN+LL +M
Sbjct: 96 GEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMN 150
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFGLA K T + GT YI PE A + + +SDV+S G + ++ G
Sbjct: 151 IKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
Query: 183 K 183
+
Sbjct: 209 R 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 43/270 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
GEV+ +K+L + + F EV + L+H N+++ +G + + EY+ +L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 66 DCYLFDPIRRLI------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
R +I W +RV + I G+ YL + IIHRDL + N L+ E
Sbjct: 95 --------RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRE 143
Query: 120 DMKPKISDFGLARIFAKE--------SLKANTEQ----VVGTIGYIPPEYARQGVYSTKS 167
+ ++DFGLAR+ E SLK + VVG ++ PE Y K
Sbjct: 144 NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKV 203
Query: 168 DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKL 227
DVFSFG++L +II +N + L + G+ V FLD
Sbjct: 204 DVFSFGIVLCEIIG--------RVNADPDYLPRTMDF-----GLN-VRGFLDRYCPPNCP 249
Query: 228 MRCLEIALLCVQENPNDRPSMLEVSSMLKN 257
I + C +P RPS +++ L+
Sbjct: 250 PSFFPITVRCCDLDPEKRPSFVKLEHWLET 279
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L S + + +F +E + + H N+I + G S M++ E+M N SLD
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L + + + V ++ GI G+ YL + + +HR L A NIL+ ++ K+SD
Sbjct: 98 FLRQNDGQFTV--IQLVGMLRGIAAGMKYLAD---MNYVHRALAARNILVNSNLVCKVSD 152
Query: 128 FGLARIFAKESLKANTEQVVG---TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GK 183
FGL+R ++ +G I + PE + +++ SDV+S+G+++ +++S G+
Sbjct: 153 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
Query: 184 RLSMLCGINENLSILEHAYEL-----WKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCV 238
R + ++ +E Y L +D + DRN K + + L +
Sbjct: 213 RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN-TLDKM 271
Query: 239 QENPNDRPSMLEVSS 253
NPN +M +SS
Sbjct: 272 IRNPNSLKAMAPLSS 286
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 36/256 (14%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK + K + E F E + LQH L++ L + E ++ E+M SL +
Sbjct: 42 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDF 99
Query: 69 LF------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L P+ +LI D+ + I +G+ ++++ + IHRDL+A+NIL+ +
Sbjct: 100 LKSDEGSKQPLPKLI-DFSAQ------IAEGMAFIEQRN---YIHRDLRAANILVSASLV 149
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFGLAR+ A E I + PE G ++ KSDV+SFG+LL++I++
Sbjct: 150 CKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 208
Query: 183 KRLSMLCGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQEN 241
R+ N E + LE Y + R +C I + C +
Sbjct: 209 GRIPYPGMSNPEVIRALERGYRM---------------PRPENCP-EELYNIMMRCWKNR 252
Query: 242 PNDRPSMLEVSSMLKN 257
P +RP+ + S+L +
Sbjct: 253 PEERPTFEYIQSVLDD 268
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 36/256 (14%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK + K + E F E + LQH L++ L + E ++ E+M SL +
Sbjct: 215 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDF 272
Query: 69 LF------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L P+ +LI D+ + I +G+ ++++ + IHRDL+A+NIL+ +
Sbjct: 273 LKSDEGSKQPLPKLI-DFSAQ------IAEGMAFIEQRN---YIHRDLRAANILVSASLV 322
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFGLAR+ A E I + PE G ++ KSDV+SFG+LL++I++
Sbjct: 323 CKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 381
Query: 183 KRLSMLCGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQEN 241
R+ N E + LE Y + R +C I + C +
Sbjct: 382 GRIPYPGMSNPEVIRALERGYRM---------------PRPENCP-EELYNIMMRCWKNR 425
Query: 242 PNDRPSMLEVSSMLKN 257
P +RP+ + S+L +
Sbjct: 426 PEERPTFEYIQSVLDD 441
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 7 EVIAVKKLSKSSAQG--FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
+ +A+K L K A+G EEF++E ML A+LQH N++ +LG + +++ Y +
Sbjct: 40 QAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 65 LDCYLF-------------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLK 111
L +L D + L+ VH++ I G+ YL + ++H+DL
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLA 155
Query: 112 ASNILLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
N+L+ + + KISD GL R ++A + K ++ I ++ PE G +S SD++
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIW 214
Query: 171 SFGVLLLQIISGKRLSMLCGINENLSILE 199
S+GV+L ++ S L CG + N ++E
Sbjct: 215 SYGVVLWEVFS-YGLQPYCGYS-NQDVVE 241
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 7 EVIAVKKLSKSSAQG--FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
+ +A+K L K A+G EEF++E ML A+LQH N++ +LG + +++ Y +
Sbjct: 57 QAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 65 LDCYLF-------------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLK 111
L +L D + L+ VH++ I G+ YL + ++H+DL
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLA 172
Query: 112 ASNILLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
N+L+ + + KISD GL R ++A + K ++ I ++ PE G +S SD++
Sbjct: 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIW 231
Query: 171 SFGVLLLQIISGKRLSMLCGINENLSILE 199
S+GV+L ++ S L CG + N ++E
Sbjct: 232 SYGVVLWEVFS-YGLQPYCGYS-NQDVVE 258
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 46/256 (17%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+AVK + K + E F E + LQH L++ L + E ++ E+M SL +
Sbjct: 209 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLLDF 266
Query: 69 LF------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L P+ +LI I +G+ ++++ + IHRDL+A+NIL+ +
Sbjct: 267 LKSDEGSKQPLPKLI-------DFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLV 316
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFGLAR+ AK +K + PE G ++ KSDV+SFG+LL++I++
Sbjct: 317 CKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTY 365
Query: 183 KRLSMLCGIN-ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQEN 241
R+ N E + LE Y + R +C I + C +
Sbjct: 366 GRIPYPGMSNPEVIRALERGYRM---------------PRPENCP-EELYNIMMRCWKNR 409
Query: 242 PNDRPSMLEVSSMLKN 257
P +RP+ + S+L +
Sbjct: 410 PEERPTFEYIQSVLDD 425
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 50/264 (18%)
Query: 10 AVKKLSK-SSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
A+K++ + +S +F E+ + KL H N+I +LG C L EY P+ +L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 68 YL-------FDPIRRL------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
+L DP + L ++ +H + +G+ YL S+ IHRDL A N
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARN 162
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYA-----RQGVYSTKSDV 169
IL+GE+ KI+DFGL+R V T+G +P + VY+T SDV
Sbjct: 163 ILVGENYVAKIADFGLSR--------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 214
Query: 170 FSFGVLLLQIISGKRLSMLCGIN--ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKL 227
+S+GVLL +I+S + CG+ E L Y L K + D D L
Sbjct: 215 WSYGVLLWEIVSLGG-TPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYD-------L 263
Query: 228 MRCLEIALLCVQENPNDRPSMLEV 251
MR C +E P +RPS ++
Sbjct: 264 MR------QCWREKPYERPSFAQI 281
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 50/264 (18%)
Query: 10 AVKKLSK-SSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
A+K++ + +S +F E+ + KL H N+I +LG C L EY P+ +L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 68 YL-------FDPIRRL------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
+L DP + L ++ +H + +G+ YL S+ IHRDL A N
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARN 172
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYA-----RQGVYSTKSDV 169
IL+GE+ KI+DFGL+R V T+G +P + VY+T SDV
Sbjct: 173 ILVGENYVAKIADFGLSR--------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 224
Query: 170 FSFGVLLLQIISGKRLSMLCGIN--ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKL 227
+S+GVLL +I+S + CG+ E L Y L K + D D L
Sbjct: 225 WSYGVLLWEIVSLGG-TPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYD-------L 273
Query: 228 MRCLEIALLCVQENPNDRPSMLEV 251
MR C +E P +RPS ++
Sbjct: 274 MR------QCWREKPYERPSFAQI 291
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKS 64
G +AVK + + + F E + +L+H NL+++LG ++ + + +V EYM S
Sbjct: 35 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L YL R +L + + + + YL+ + +HRDL A N+L+ ED K
Sbjct: 93 LVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 148
Query: 125 ISDFGLARIFAKESLKANTEQVVG--TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+SDFGL + +A++ Q G + + PE R+ +STKSDV+SFG+LL +I S
Sbjct: 149 VSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSF 201
Query: 183 KRL 185
R+
Sbjct: 202 GRV 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G +AVK + Q E NEV++ QH N++ + + EE ++ E++ +L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + ++ L+ ++ + E + Q L YL +IHRD+K+ +ILL D + K+
Sbjct: 130 T----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKL 182
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
SDFG +K+ K +VGT ++ PE + +Y+T+ D++S G+++++++ G+
Sbjct: 183 SDFGFCAQISKDVPKRKX--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 121/265 (45%), Gaps = 52/265 (19%)
Query: 10 AVKKLSK-SSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
A+K++ + +S +F E+ + KL H N+I +LG C L EY P+ +L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 68 YL-------FDPIRRL------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
+L DP + L ++ +H + +G+ YL S+ IHR+L A N
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARN 169
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYA-----RQGVYSTKSDV 169
IL+GE+ KI+DFGL+R V T+G +P + VY+T SDV
Sbjct: 170 ILVGENYVAKIADFGLSR--------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 221
Query: 170 FSFGVLLLQIIS-GKRLSMLCGIN--ENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK 226
+S+GVLL +I+S G + CG+ E L Y L K + D D
Sbjct: 222 WSYGVLLWEIVSLGG--TPYCGMTCAELYEKLPQGYRL---EKPLNCDDEVYD------- 269
Query: 227 LMRCLEIALLCVQENPNDRPSMLEV 251
LMR C +E P +RPS ++
Sbjct: 270 LMR------QCWREKPYERPSFAQI 288
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 105/188 (55%), Gaps = 19/188 (10%)
Query: 3 LPCGEVI----AVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE + A+K L++++ + EF +E ++ A + H +L+R+LG C+ S LV
Sbjct: 37 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVT 95
Query: 58 EYMPNKSLDCYLF---DPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+ MP+ L Y+ D I +L+L+W + I +G++YL+E ++HRDL A
Sbjct: 96 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEERR---LVHRDLAAR 146
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ KI+DFGLAR+ + + N + I ++ E ++ +SDV+S+G
Sbjct: 147 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 206
Query: 174 VLLLQIIS 181
V + ++++
Sbjct: 207 VTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 105/188 (55%), Gaps = 19/188 (10%)
Query: 3 LPCGEVI----AVKKLSKSSA-QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE + A+K L++++ + EF +E ++ A + H +L+R+LG C+ S LV
Sbjct: 60 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVT 118
Query: 58 EYMPNKSLDCYLF---DPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+ MP+ L Y+ D I +L+L+W + I +G++YL+E ++HRDL A
Sbjct: 119 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEERR---LVHRDLAAR 169
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ KI+DFGLAR+ + + N + I ++ E ++ +SDV+S+G
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 229
Query: 174 VLLLQIIS 181
V + ++++
Sbjct: 230 VTIWELMT 237
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKS 64
G +AVK + + + F E + +L+H NL+++LG ++ + + +V EYM S
Sbjct: 44 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L YL R +L + + + + YL+ + +HRDL A N+L+ ED K
Sbjct: 102 LVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 157
Query: 125 ISDFGLARIFAKESLKANTEQVVG--TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+SDFGL + +A++ Q G + + PE R+ +STKSDV+SFG+LL +I S
Sbjct: 158 VSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 210
Query: 183 KRL 185
R+
Sbjct: 211 GRV 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKS 64
G +AVK + + + F E + +L+H NL+++LG ++ + + +V EYM S
Sbjct: 29 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L YL R +L + + + + YL+ + +HRDL A N+L+ ED K
Sbjct: 87 LVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 142
Query: 125 ISDFGLARIFAKESLKANTEQVVG--TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+SDFGL + +A++ Q G + + PE R+ +STKSDV+SFG+LL +I S
Sbjct: 143 VSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 195
Query: 183 KRL 185
R+
Sbjct: 196 GRV 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMPNKS 64
G +AVK + + + F E + +L+H NL+++LG ++ + + +V EYM S
Sbjct: 216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L YL R +L + + + + YL+ + +HRDL A N+L+ ED K
Sbjct: 274 LVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 329
Query: 125 ISDFGLARIFAKESLKANTEQVVG--TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+SDFGL + +A++ Q G + + PE R+ +STKSDV+SFG+LL +I S
Sbjct: 330 VSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382
Query: 183 KRL 185
R+
Sbjct: 383 GRV 385
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N++ + G + M+V E+M N +LD +L + + +
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQL 147
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL + + +HRDL A NIL+ ++ K+SDFGL+R+ ++ +
Sbjct: 148 VGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDP 199
Query: 144 EQVVGTIG------YIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLS 196
E V T G + PE + +++ SDV+S+G+++ +++S G+R + +
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 259
Query: 197 ILEHAYEL 204
+E Y L
Sbjct: 260 AIEEGYRL 267
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N+IR+ G + M++ EYM N +LD +L + + +
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQL 149
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
V ++ GI G+ YL + + +HRDL A NIL+ ++ K+SDFGL+R+ L+ +
Sbjct: 150 VGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV-----LEDDP 201
Query: 144 EQVVGTIG------YIPPEYARQGVYSTKSDVFSFGVLLLQIIS-GKRLSMLCGINENLS 196
E T G + PE +++ SDV+SFG+++ ++++ G+R +E +
Sbjct: 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 261
Query: 197 ILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSML 255
+ + L + +D ++ +LM + C Q+ RP ++ S+L
Sbjct: 262 AINDGFRL----------PTPMDCPSAIYQLM------MQCWQQERARRPKFADIVSIL 304
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 16 KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRR 75
KS Q F+ + ++ L H +++R+LG C S + LV +Y+P SL D +R+
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL----LDHVRQ 107
Query: 76 --------LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+L+W + I +G+ YL+E+ ++HR+L A N+LL + +++D
Sbjct: 108 HRGALGPQLLLNWGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVAD 158
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FG+A + + + + I ++ E G Y+ +SDV+S+GV + ++++
Sbjct: 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 16 KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRR 75
KS Q F+ + ++ L H +++R+LG C S + LV +Y+P SL D +R+
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL----LDHVRQ 125
Query: 76 --------LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+L+W + I +G+ YL+E+ ++HR+L A N+LL + +++D
Sbjct: 126 HRGALGPQLLLNWGVQ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVAD 176
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FG+A + + + + I ++ E G Y+ +SDV+S+GV + ++++
Sbjct: 177 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 121/270 (44%), Gaps = 48/270 (17%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S + A E +E+ + + L QH N++ +LG C +++ EY
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC------ 124
Query: 67 CY--LFDPIRRLI-----------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
CY L + +RR L+ + +H + QG+ +L + IHRD+ A
Sbjct: 125 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 181
Query: 114 NILLGEDMKPKISDFGLARIFAKES---LKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
N+LL KI DFGLAR +S +K N + ++ PE VY+ +SDV+
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL---PVKWMAPESIFDCVYTVQSDVW 238
Query: 171 SFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGMEFVDSFLDDRNSSCKLM 228
S+G+LL +I S G+N IL ++ Y+L K G M +N +
Sbjct: 239 SYGILLWEIFS-------LGLNPYPGILVNSKFYKLVKDGYQM--AQPAFAPKNIYSIMQ 289
Query: 229 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 258
C + P RP+ ++ S L+ +
Sbjct: 290 ACWAL-------EPTHRPTFQQICSFLQEQ 312
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 22/192 (11%)
Query: 2 VLPCGEVI-----AVKKLSKSSAQGFEEFK--NEVMLTAKLQHVNLIRVLGFCIDSEERM 54
VL C + I AVK ++K+SA+ + EV L KL H N++++ DS
Sbjct: 38 VLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97
Query: 55 LVYEYMPNKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+V E L FD I +R II+ + G+ Y+ +++ I+HRDLK
Sbjct: 98 IVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPE 150
Query: 114 NILLG---EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
NILL +D KI DFGL+ F + + + +GT YI PE R G Y K DV+
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR-GTYDEKCDVW 206
Query: 171 SFGVLLLQIISG 182
S GV+L ++SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 121/270 (44%), Gaps = 48/270 (17%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S + A E +E+ + + L QH N++ +LG C +++ EY
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC------ 132
Query: 67 CY--LFDPIRRLI-----------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
CY L + +RR L+ + +H + QG+ +L + IHRD+ A
Sbjct: 133 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 189
Query: 114 NILLGEDMKPKISDFGLARIFAKES---LKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
N+LL KI DFGLAR +S +K N + ++ PE VY+ +SDV+
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL---PVKWMAPESIFDCVYTVQSDVW 246
Query: 171 SFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGMEFVDSFLDDRNSSCKLM 228
S+G+LL +I S G+N IL ++ Y+L K G M +N +
Sbjct: 247 SYGILLWEIFS-------LGLNPYPGILVNSKFYKLVKDGYQM--AQPAFAPKNIYSIMQ 297
Query: 229 RCLEIALLCVQENPNDRPSMLEVSSMLKNE 258
C + P RP+ ++ S L+ +
Sbjct: 298 ACWAL-------EPTHRPTFQQICSFLQEQ 320
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ DS L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKK---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S +A + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 119/268 (44%), Gaps = 40/268 (14%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S + A E +E+ + + L QH N++ +LG C +++ EY L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 67 CYL--------FDP---IRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
+L DP I L + +H + QG+ +L + IHRD+ A N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 195
Query: 116 LLGEDMKPKISDFGLARIFAKES---LKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSF 172
LL KI DFGLAR +S +K N V ++ PE VY+ +SDV+S+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSY 252
Query: 173 GVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGMEFVDSFLDDRNSSCKLMRC 230
G+LL +I S G+N IL ++ Y+L K G M +N + C
Sbjct: 253 GILLWEIFS-------LGLNPYPGILVNSKFYKLVKDGYQM--AQPAFAPKNIYSIMQAC 303
Query: 231 LEIALLCVQENPNDRPSMLEVSSMLKNE 258
+ P RP+ ++ S L+ +
Sbjct: 304 WAL-------EPTHRPTFQQICSFLQEQ 324
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 22/192 (11%)
Query: 2 VLPCGEVI-----AVKKLSKSSAQGFEEFK--NEVMLTAKLQHVNLIRVLGFCIDSEERM 54
VL C + I AVK ++K+SA+ + EV L KL H N++++ DS
Sbjct: 38 VLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97
Query: 55 LVYEYMPNKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+V E L FD I +R II+ + G+ Y+ +++ I+HRDLK
Sbjct: 98 IVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPE 150
Query: 114 NILLG---EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
NILL +D KI DFGL+ F + + + +GT YI PE R G Y K DV+
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR-GTYDEKCDVW 206
Query: 171 SFGVLLLQIISG 182
S GV+L ++SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 22/192 (11%)
Query: 2 VLPCGEVI-----AVKKLSKSSAQGFEEFK--NEVMLTAKLQHVNLIRVLGFCIDSEERM 54
VL C + I AVK ++K+SA+ + EV L KL H N++++ DS
Sbjct: 38 VLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97
Query: 55 LVYEYMPNKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+V E L FD I +R II+ + G+ Y+ +++ I+HRDLK
Sbjct: 98 IVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPE 150
Query: 114 NILLG---EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVF 170
NILL +D KI DFGL+ F + + + +GT YI PE R G Y K DV+
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLR-GTYDEKCDVW 206
Query: 171 SFGVLLLQIISG 182
S GV+L ++SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 98 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S +A + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 151 KIADFGWS-VHAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE 99
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 100 V----YKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 153 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S +A + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 96 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 148
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 149 KIADFGWS-VHAPSSRRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + ++ GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRT---ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 100 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 153 KIADFGWS-VHAPSSRRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ +A+++++ E NE+++ + ++ N++ L + +E +V EY+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + +D + + Q L +L +IHRD+K+ NILLG D K+
Sbjct: 105 T----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+DFG E K +T +VGT ++ PE + Y K D++S G++ +++I G+
Sbjct: 158 TDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE 99
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 100 V----YKELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 153 KIADFGWS-VHAPSSRRX---XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 31 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 90
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 91 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 145
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R + ++ VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 146 SDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 32/251 (12%)
Query: 9 IAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER-----MLVYEYMP 61
+AVK KL SS + EEF +E H N+IR+LG CI+ + M++ +M
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 62 NKSLDCYLFDPIRRL-----ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL 116
L YL RL + + + + I G+ YL S +HRDL A N +
Sbjct: 125 YGDLHTYLL--YSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCM 179
Query: 117 LGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
L +DM ++DFGL++ + +I E VY++KSDV++FGV +
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 177 LQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL 236
+I + + ++ G+ + Y+ G ++ + LD+ EI
Sbjct: 240 WEIAT-RGMTPYPGVQNH-----EMYDYLLHGHRLKQPEDCLDE---------LYEIMYS 284
Query: 237 CVQENPNDRPS 247
C + +P DRP+
Sbjct: 285 CWRTDPLDRPT 295
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 40/268 (14%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S + A E +E+ + + L QH N++ +LG C +++ EY L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 67 CYLFDPIRRLILD-----------WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
+L R L D + +H + QG+ +L + IHRD+ A N+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 195
Query: 116 LLGEDMKPKISDFGLARIFAKES---LKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSF 172
LL KI DFGLAR +S +K N V ++ PE VY+ +SDV+S+
Sbjct: 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSY 252
Query: 173 GVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGMEFVDSFLDDRNSSCKLMRC 230
G+LL +I S G+N IL ++ Y+L K G M +N + C
Sbjct: 253 GILLWEIFS-------LGLNPYPGILVNSKFYKLVKDGYQM--AQPAFAPKNIYSIMQAC 303
Query: 231 LEIALLCVQENPNDRPSMLEVSSMLKNE 258
+ P RP+ ++ S L+ +
Sbjct: 304 WAL-------EPTHRPTFQQICSFLQEQ 324
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 96 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 148
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 149 KIADFGWS-VHAPSSRR---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 98 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 151 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 100 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 153 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 52 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 111
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 112 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 164
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 165 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 32 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 92 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 146
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R + ++ VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 147 SDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 27 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 86
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 87 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 141
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R + ++ VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 142 SDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 38 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 97
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 98 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 152
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R + ++ VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 153 SDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 61 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 121 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 173
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 174 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 39 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 99 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 151
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 152 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 98 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 151 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 32 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 91
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 92 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 144
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 145 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 47 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 107 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 161
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R + ++ VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 162 SDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 34 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 93
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 94 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 146
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 147 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 98 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 151 KIADFGWS-VHAPSSRR---DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ +A+++++ E NE+++ + ++ N++ L + +E +V EY+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + +D + + Q L +L +IHRD+K+ NILLG D K+
Sbjct: 105 T----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 126 SDFGL-ARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+DFG A+I ++S ++ ++VGT ++ PE + Y K D++S G++ +++I G+
Sbjct: 158 TDFGFCAQITPEQSKRS---EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 61 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 121 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 173
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 174 KIADFGWS-VHAPSSRR---DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE + S
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E KL H L++ G C +V EY+ N L
Sbjct: 31 GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + L + + + + + +G+ +L+ + IHRDL A N L+ D+ K+
Sbjct: 91 LNYLRSHGKGL--EPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKV 145
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFG+ R + ++ VGT + + PE YS+KSDV++FG+L+ ++ S
Sbjct: 146 SDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%), Gaps = 15/179 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG + +
Sbjct: 99 V----YRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGEL 151
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + G
Sbjct: 152 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG + +
Sbjct: 99 V----YRELQKLSRFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGEL 151
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFG + + A S + + + GT+ Y+PPE ++ K D++S GVL + + G
Sbjct: 152 KIADFGWS-VHAPSSRR---DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 100 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 152
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE + K D++S GVL + + GK
Sbjct: 153 KIADFGWS-VHAPSSRRTT---LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 104/190 (54%), Gaps = 24/190 (12%)
Query: 8 VIAVKKLSKSSAQG-------FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
V+A+K L ++G F+EF+ EV + + L H N++++ G + + RM V E++
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRM-VMEFV 103
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
P L L D + + W ++ ++ I G+ Y+Q + I+HRDL++ NI L
Sbjct: 104 PCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSL 160
Query: 119 EDMKP---KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY--ARQGVYSTKSDVFSFG 173
++ P K++DFGL +++S+ + ++G ++ PE A + Y+ K+D +SF
Sbjct: 161 DENAPVCAKVADFGL----SQQSVHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 174 VLLLQIISGK 183
++L I++G+
Sbjct: 216 MILYTILTGE 225
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 96
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 97 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 149
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 150 KIADFGWS-VHAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 47 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 107 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 161
Query: 126 SDFGLARIFAKESLKANTEQVVGT---IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R L VG+ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 162 SDFGLSRYV----LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRT---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ K+ K + +EF E + L H L+++ G C ++ EYM N L
Sbjct: 32 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
YL + R ++ + + + + + + YL+ +HRDL A N L+ + K+
Sbjct: 92 LNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKV 146
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
SDFGL+R + ++ + + PPE +S+KSD+++FGVL+ +I S
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKF-PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 98 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 151 KIADFGWS-VHAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 95 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 147
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 148 KIADFGWS-VHAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ +A+++++ E NE+++ + ++ N++ L + +E +V EY+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + +D + + Q L +L +IHRD+K+ NILLG D K+
Sbjct: 105 T----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 157
Query: 126 SDFGL-ARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+DFG A+I ++S ++ +VGT ++ PE + Y K D++S G++ +++I G+
Sbjct: 158 TDFGFCAQITPEQSKRS---XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 33 AKLQHVNLIRVLGFCIDSEERMLV-YEYMPNKSLDCYLFDPIRRL--ILDWKKRVHIIEG 89
++L H ++ L FC +E++ Y N L Y IR++ + R + E
Sbjct: 92 SRLDHPFFVK-LYFCFQDDEKLYFGLSYAKNGELLKY----IRKIGSFDETCTRFYTAE- 145
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I L YL IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE + SD+++ G ++ Q+++G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ +A+++++ E NE+++ + ++ N++ L + +E +V EY+ SL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + +D + + Q L +L +IHRD+K+ NILLG D K+
Sbjct: 106 T----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKL 158
Query: 126 SDFGL-ARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+DFG A+I ++S ++ +VGT ++ PE + Y K D++S G++ +++I G+
Sbjct: 159 TDFGFCAQITPEQSKRS---XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+ +A+++++ E NE+++ + ++ N++ L + +E +V EY+ SL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + +D + + Q L +L +IHR++K+ NILLG D K+
Sbjct: 106 T----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKL 158
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+DFG E K +T +VGT ++ PE + Y K D++S G++ +++I G+
Sbjct: 159 TDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 29/263 (11%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLI---RVLGFCIDSEERMLVYEYMPN 62
G ++AVK+L S +F+ E+ + L H + I R + + E LV EY+P+
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L +L R LD + + I +G+ YL SR +HRDL A NIL+ +
Sbjct: 95 GCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLG--SR-RCVHRDLAARNILVESEAH 149
Query: 123 PKISDFGLARIFA-KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII- 180
KI+DFGLA++ + E I + PE ++S +SDV+SFGV+L ++
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
Query: 181 --------SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLE 232
S + L M+ G ++ L EL + G+ + +C E
Sbjct: 210 YCDKSCSPSAEFLRMM-GCERDVPALCRLLELLEEGQRLP--------APPACP-AEVHE 259
Query: 233 IALLCVQENPNDRPSMLEVSSML 255
+ LC +P DRPS + L
Sbjct: 260 LMKLCWAPSPQDRPSFSALGPQL 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 96
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 97 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 149
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI++FG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 150 KIANFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 9 IAVKKL---SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
+A+K + + + + F+ EV +++L H N++ ++ + + LV EY+ +L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 66 DCYL--FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
Y+ P L ++ I G+ + + + I+HRD+K NIL+ +
Sbjct: 99 SEYIESHGP-----LSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFG+A+ ++ SL T V+GT+ Y PE A+ +D++S G++L +++ G+
Sbjct: 151 KIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 6 GEVIAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GE +AVK L +S + K E+ + L H N+++ G C + L+ E++P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL P + ++ K+++ I +G+ YL +HRDL A N+L+ + +
Sbjct: 98 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQ 152
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL + KE ++ Y PE Q + SDV+SFGV L +++
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELL 211
Query: 181 S 181
+
Sbjct: 212 T 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 6 GEVIAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GE +AVK L +S + K E+ + L H N+++ G C + L+ E++P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL P + ++ K+++ I +G+ YL +HRDL A N+L+ + +
Sbjct: 110 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQ 164
Query: 123 PKISDFGLARIFA--KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGL + KE ++ Y PE Q + SDV+SFGV L +++
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELL 223
Query: 181 S 181
+
Sbjct: 224 T 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 54/276 (19%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S + A E +E+ + + L QH N++ +LG C +++ EY
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC------ 132
Query: 67 CY--LFDPIRRL-----------------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
CY L + +RR L + +H + QG+ +L + IH
Sbjct: 133 CYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIH 189
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKES---LKANTEQVVGTIGYIPPEYARQGVYS 164
RD+ A N+LL KI DFGLAR +S +K N + ++ PE VY+
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL---PVKWMAPESIFDCVYT 246
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGMEFVDSFLDDRN 222
+SDV+S+G+LL +I S G+N IL ++ Y+L K G M +N
Sbjct: 247 VQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVKDGYQM--AQPAFAPKN 297
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 258
+ C + P RP+ ++ S L+ +
Sbjct: 298 IYSIMQACWAL-------EPTHRPTFQQICSFLQEQ 326
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 96 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 148
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI+DFG + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 149 KIADFGWS-CHAPSSRRTT---LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 8 VIAVKKLSKSSAQ--GFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L K+ + G E + + EV + + L+H N++R+ G+ D+ L+ EY P +
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+ + +++L D ++ I + L Y +IHRD+K N+LLG +
Sbjct: 98 V----YRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGEL 150
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI++FG + + A S + + GT+ Y+PPE ++ K D++S GVL + + GK
Sbjct: 151 KIANFGWS-VHAPSSRRTT---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 29/263 (11%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLI---RVLGFCIDSEERMLVYEYMPN 62
G ++AVK+L S +F+ E+ + L H + I R + + + LV EY+P+
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L +L R LD + + I +G+ YL +HRDL A NIL+ +
Sbjct: 111 GCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 165
Query: 123 PKISDFGLARIFA-KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII- 180
KI+DFGLA++ + E I + PE ++S +SDV+SFGV+L ++
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
Query: 181 --------SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLE 232
S + L M+ G ++ L EL + G+ + +C E
Sbjct: 226 YCDKSCSPSAEFLRMM-GCERDVPALSRLLELLEEGQRLP--------APPACP-AEVHE 275
Query: 233 IALLCVQENPNDRPSMLEVSSML 255
+ LC +P DRPS + L
Sbjct: 276 LMKLCWAPSPQDRPSFSALGPQL 298
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 98/232 (42%), Gaps = 27/232 (11%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + L D+ H+I
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 89 ---GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+ +G+ +L SR IHRDL A NILL E KI DFGLAR K+
Sbjct: 149 YSFQVAKGMEFLA--SR-KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 146 VVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELW 205
+ ++ PE VY+ +SDV+SFGVLL +I S+ + I E
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI-----FSLGASPYPGVKIDEEFXRRL 260
Query: 206 KGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKN 257
K G M R + L C P+ RP+ E+ L N
Sbjct: 261 KEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 303
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 61/283 (21%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEVMLTAKL-QHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S + A E +E+ + + L QH N++ +LG C +++ EY
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC------ 117
Query: 67 CY--LFDPIRRLI------------------------LDWKKRVHIIEGITQGLLYLQEY 100
CY L + +RR L+ + +H + QG+ +L
Sbjct: 118 CYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL--- 174
Query: 101 SRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKES---LKANTEQVVGTIGYIPPEY 157
+ IHRD+ A N+LL KI DFGLAR +S +K N + ++ PE
Sbjct: 175 ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL---PVKWMAPES 231
Query: 158 ARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA--YELWKGGKGMEFVD 215
VY+ +SDV+S+G+LL +I S G+N IL ++ Y+L K G +
Sbjct: 232 IFDCVYTVQSDVWSYGILLWEIFS-------LGLNPYPGILVNSKFYKLVK--DGYQMAQ 282
Query: 216 SFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSMLKNE 258
+N + C + P RP+ ++ S L+ +
Sbjct: 283 PAFAPKNIYSIMQACWAL-------EPTHRPTFQQICSFLQEQ 318
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+ +AVKK+ Q E NEV++ H N++ + + +E +V E++ +
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L D + ++ ++ + + + L YL +IHRD+K+ +ILL D + K
Sbjct: 129 LT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIK 181
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+SDFG +KE K + +VGT ++ PE + Y T+ D++S G++++++I G+
Sbjct: 182 LSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 188 KSSDLWALGCIIYQLVAG 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 195 KSSDLWALGCIIYQLVAG 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 189 KSSDLWALGCIIYQLVAG 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 29/263 (11%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLI---RVLGFCIDSEERMLVYEYMPN 62
G ++AVK+L S +F+ E+ + L H + I R + + + LV EY+P+
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L +L R LD + + I +G+ YL +HRDL A NIL+ +
Sbjct: 98 GCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 152
Query: 123 PKISDFGLARIFA-KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII- 180
KI+DFGLA++ + E I + PE ++S +SDV+SFGV+L ++
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
Query: 181 --------SGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLE 232
S + L M+ G ++ L EL + G+ + +C E
Sbjct: 213 YCDKSCSPSAEFLRMM-GSERDVPALSRLLELLEEGQRLP--------APPACP-AEVHE 262
Query: 233 IALLCVQENPNDRPSMLEVSSML 255
+ LC +P DRPS + L
Sbjct: 263 LMKLCWAPSPQDRPSFSALGPQL 285
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 191 KSSDLWALGCIIYQLVAG 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 190 KSSDLWALGCIIYQLVAG 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 24/190 (12%)
Query: 8 VIAVKKLSKSSAQG-------FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
V+A+K L ++G F+EF+ EV + + L H N++++ G + + RM V E++
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRM-VMEFV 103
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
P L L D + + W ++ ++ I G+ Y+Q + I+HRDL++ NI L
Sbjct: 104 PCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSL 160
Query: 119 EDMKP---KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY--ARQGVYSTKSDVFSFG 173
++ P K++DFG +++S+ + ++G ++ PE A + Y+ K+D +SF
Sbjct: 161 DENAPVCAKVADFGT----SQQSVHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 174 VLLLQIISGK 183
++L I++G+
Sbjct: 216 MILYTILTGE 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS 164
IIHRDLK NILL EDM +I+DFG A++ + ES +A VGT Y+ PE +
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 165 TKSDVFSFGVLLLQIISG 182
SD+++ G ++ Q+++G
Sbjct: 216 KSSDLWALGCIIYQLVAG 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 6 GEVIAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GE++AVK L + Q +K E+ + L H ++I+ G C D E+ LV EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
SL YL R + + + + I +G+ YL IHR+L A N+LL D
Sbjct: 103 GSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDRL 155
Query: 123 PKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
KI DFGLA+ + E + + PE ++ + SDV+SFGV L ++++
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEE--FKNEVMLTAKLQHVNLIRVLGFCIDSEERML--VYEYMP 61
G+++ K+L S E+ +EV L +L+H N++R ID L V EY
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 62 NKSLDCYLFDPIR-RLILDWKKRVHIIEGITQGLLYLQEYSRL-----TIIHRDLKASNI 115
L + + R LD + ++ +TQ L L+E R T++HRDLK +N+
Sbjct: 91 GGDLASVITKGTKERQYLDEE---FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 116 LLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVL 175
L K+ DFGLARI ++ A T VGT Y+ PE + Y+ KSD++S G L
Sbjct: 148 FLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 176 LLQI 179
L ++
Sbjct: 206 LYEL 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 15/182 (8%)
Query: 6 GEVIAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GE++AVK L + Q +K E+ + L H ++I+ G C D E+ LV EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYL--QEYSRLTIIHRDLKASNILLGED 120
SL YL R + + + + I +G+ YL Q Y IHR+L A N+LL D
Sbjct: 103 GSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQHY-----IHRNLAARNVLLDND 153
Query: 121 MKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI DFGLA+ + E + + PE ++ + SDV+SFGV L ++
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 180 IS 181
++
Sbjct: 214 LT 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 24/190 (12%)
Query: 8 VIAVKKLSKSSAQG-------FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
V+A+K L ++G F+EF+ EV + + L H N++++ G + + RM V E++
Sbjct: 46 VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRM-VMEFV 103
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
P L L D + + W ++ ++ I G+ Y+Q + I+HRDL++ NI L
Sbjct: 104 PCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSL 160
Query: 119 EDMKP---KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY--ARQGVYSTKSDVFSFG 173
++ P K++DF L +++S+ + ++G ++ PE A + Y+ K+D +SF
Sbjct: 161 DENAPVCAKVADFSL----SQQSVHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 174 VLLLQIISGK 183
++L I++G+
Sbjct: 216 MILYTILTGE 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL F+P L K V + +G+ YL + IHRDL A
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 240 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 285
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 286 RD------CWHAVPSQRPT 298
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G+++AVKK+ Q E NEV++ QH N++ + + +E +V E++ +L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
D + ++ ++ + + Q L L +IHRD+K+ +ILL D + K+
Sbjct: 105 T----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKL 157
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
SDFG +KE + + +VGT ++ PE + Y + D++S G+++++++ G+
Sbjct: 158 SDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 106
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 107 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+++AVKK+ Q E NEV++ QH N++ + + +E +V E++ +
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L D + ++ ++ + + Q L L +IHRD+K+ +ILL D + K
Sbjct: 108 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 160
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+SDFG +KE + + +VGT ++ PE + Y + D++S G+++++++ G+
Sbjct: 161 LSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 112
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 112
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 113 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 6 GEVIAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS--EERMLVYEYMPN 62
GE++AVK L + + Q +K E+ + L H ++I+ G C D+ LV EY+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYL--QEYSRLTIIHRDLKASNILLGED 120
SL YL R + + + + I +G+ YL Q Y IHRDL A N+LL D
Sbjct: 120 GSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQHY-----IHRDLAARNVLLDND 170
Query: 121 MKPKISDFGLARIF--AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
KI DFGLA+ E + E + + PE ++ + SDV+SFGV L +
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVR-EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 179 IIS 181
+++
Sbjct: 230 LLT 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 108
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 109 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHII- 87
H+N++ +LG C M++ E+ +L YL F P + L D+ H+I
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 88 --EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+ +G+ +L SR IHRDL A NILL E KI DFGLAR K+
Sbjct: 149 YSFQVAKGMEFLA--SR-KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 146 VVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLI---RVLGFCIDSEERMLVYEYMPN 62
G ++AVK+L S +F+ E+ + L H + I R + + + LV EY+P+
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L +L R LD + + I +G+ YL +HRDL A NIL+ +
Sbjct: 99 GCLRDFLQR--HRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 153
Query: 123 PKISDFGLARIFA-KESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
KI+DFGLA++ + E I + PE ++S +SDV+SFGV+L ++ +
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 118
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 119 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 126
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E +HRDL A N+LL KISDFGL++ A E+
Sbjct: 127 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 128
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E +HRDL A N+LL KISDFGL++ A E+
Sbjct: 129 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 128
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E +HRDL A N+LL KISDFGL++ A E+
Sbjct: 129 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+++AVKK+ Q E NEV++ QH N++ + + +E +V E++ +
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L D + ++ ++ + + Q L L +IHRD+K+ +ILL D + K
Sbjct: 113 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 165
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+SDFG +KE + + +VGT ++ PE + Y + D++S G+++++++ G+
Sbjct: 166 LSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + A L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+++AVKK+ Q E NEV++ QH N++ + + +E +V E++ +
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L D + ++ ++ + + Q L L +IHRD+K+ +ILL D + K
Sbjct: 115 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 167
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+SDFG +KE + + +VGT ++ PE + Y + D++S G+++++++ G+
Sbjct: 168 LSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 25/183 (13%)
Query: 10 AVKKLSKSSAQGFEEFK--NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
A+K + K+S K EV + L H N++++ F D LV E C
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME--------C 117
Query: 68 Y----LFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
Y LFD I R+ + II+ + G+ YL +++ I+HRDLK N+LL K
Sbjct: 118 YKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEK 174
Query: 123 P---KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI DFGL+ +F E+ K E+ +GT YI PE R+ Y K DV+S GV+L +
Sbjct: 175 DALIKIVDFGLSAVF--ENQKKMKER-LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFIL 230
Query: 180 ISG 182
++G
Sbjct: 231 LAG 233
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 470
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 471 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKK 82
+E E + +L + ++R++G C ++E MLV E L+ YL R + D K
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KN 471
Query: 83 RVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESLKA 141
+ ++ ++ G+ YL+E + +HRDL A N+LL KISDFGL++ A E+
Sbjct: 472 IIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE +S+KSDV+SFGVL+ + S
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+++AVKK+ Q E NEV++ QH N++ + + +E +V E++ +
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L D + ++ ++ + + Q L L +IHRD+K+ +ILL D + K
Sbjct: 158 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 210
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+SDFG +KE + + +VGT ++ PE + Y + D++S G+++++++ G+
Sbjct: 211 LSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 48/272 (17%)
Query: 4 PCGEVIAVKKLSKSSAQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
P E +A+K+++ Q +E E+ ++ H N++ + +E LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 63 KSLDCYLFDPIRRLI---------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
S+ D I+ ++ LD I+ + +GL YL + + IHRD+KA
Sbjct: 98 GSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAG 150
Query: 114 NILLGEDMKPKISDFGLARIFAKE---SLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDV 169
NILLGED +I+DFG++ A + + VGT ++ PE Q Y K+D+
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210
Query: 170 FSFGVLLLQIISGK---------RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDD 220
+SFG+ +++ +G ++ ML N+ S+ ++ + D
Sbjct: 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL-----------------ETGVQD 253
Query: 221 RNSSCKLMRCL-EIALLCVQENPNDRPSMLEV 251
+ K + ++ LC+Q++P RP+ E+
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 48/272 (17%)
Query: 4 PCGEVIAVKKLSKSSAQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
P E +A+K+++ Q +E E+ ++ H N++ + +E LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 63 KSLDCYLFDPIRRLI---------LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
S+ D I+ ++ LD I+ + +GL YL + + IHRD+KA
Sbjct: 93 GSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAG 145
Query: 114 NILLGEDMKPKISDFGLARIFAKE---SLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDV 169
NILLGED +I+DFG++ A + + VGT ++ PE Q Y K+D+
Sbjct: 146 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 205
Query: 170 FSFGVLLLQIISGK---------RLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDD 220
+SFG+ +++ +G ++ ML N+ S+ ++ + D
Sbjct: 206 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL-----------------ETGVQD 248
Query: 221 RNSSCKLMRCL-EIALLCVQENPNDRPSMLEV 251
+ K + ++ LC+Q++P RP+ E+
Sbjct: 249 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N++R++G C + +V E + +L RL + K
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV--KTL 215
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
+ ++ G+ YL+ IHRDL A N L+ E KISDFG++R A A+
Sbjct: 216 LQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 144 EQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE G YS++SDV+SFG+LL + S
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 24 EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKR 83
+F E + + H N++R++G C + +V E + +L RL + K
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV--KTL 215
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
+ ++ G+ YL+ IHRDL A N L+ E KISDFG++R A A+
Sbjct: 216 LQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 144 EQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ + PE G YS++SDV+SFG+LL + S
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEE--FKNEVMLTAKLQHVNLIRVLGFCIDSEERML--VYEYMP 61
G+++ K+L S E+ +EV L +L+H N++R ID L V EY
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 62 NKSLDCYLFDPIR-RLILDWKKRVHIIEGITQGLLYLQEYSRL-----TIIHRDLKASNI 115
L + + R LD + ++ +TQ L L+E R T++HRDLK +N+
Sbjct: 91 GGDLASVITKGTKERQYLDEE---FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 116 LLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVL 175
L K+ DFGLARI ++ A VGT Y+ PE + Y+ KSD++S G L
Sbjct: 148 FLDGKQNVKLGDFGLARILNHDTSFAKA--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 176 LLQI 179
L ++
Sbjct: 206 LYEL 209
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 240 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 285
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 286 RD------CWHAVPSQRPT 298
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 240 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 285
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 286 RD------CWHAVPSQRPT 298
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 30/196 (15%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--------MLVYE 58
+ +AVK Q ++ + E+ T ++H NL++ I +E+R L+
Sbjct: 39 DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQF----IAAEKRGSNLEVELWLITA 93
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQE--------YSRLTIIHRDL 110
+ SL YL + I+ W + H+ E +++GL YL E + +I HRD
Sbjct: 94 FHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDF 149
Query: 111 KASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS--- 167
K+ N+LL D+ ++DFGLA F +T VGT Y+ PE + +
Sbjct: 150 KSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFL 209
Query: 168 --DVFSFGVLLLQIIS 181
D+++ G++L +++S
Sbjct: 210 RIDMYAMGLVLWELVS 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 78 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKE 137
LD + I+ I +GL YL + IHRD+KA+N+LL E + K++DFG+A
Sbjct: 121 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 138 SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+K NT VGT ++ PE +Q Y +K+D++S G+ +++ G+
Sbjct: 178 QIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 172
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 232
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 233 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 278
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 279 RD------CWHAVPSQRPT 291
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 93/179 (51%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+++AVKK+ Q E NEV++ QH N++ + + +E +V E++ +
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L D + ++ ++ + + Q L L +IHRD+K+ +ILL D + K
Sbjct: 235 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVK 287
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+SDFG +KE + + +VGT ++ PE + Y + D++S G+++++++ G+
Sbjct: 288 LSDFGFCAQVSKEVPR--RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 168
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 228
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 229 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 274
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 275 RD------CWHAVPSQRPT 287
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEE--FKNEVMLTAKLQHVNLIRVLGFCIDSEERML--VYEYMP 61
G+++ K+L S E+ +EV L +L+H N++R ID L V EY
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 62 NKSLDCYLFDPIR-RLILDWKKRVHIIEGITQGLLYLQEYSRL-----TIIHRDLKASNI 115
L + + R LD + ++ +TQ L L+E R T++HRDLK +N+
Sbjct: 91 GGDLASVITKGTKERQYLDEE---FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 116 LLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVL 175
L K+ DFGLARI + A ++ VGT Y+ PE + Y+ KSD++S G L
Sbjct: 148 FLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 176 LLQI 179
L ++
Sbjct: 206 LYEL 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 239
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 240 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 285
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 286 RD------CWHAVPSQRPT 298
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 171
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 231
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 232 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 277
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 278 RD------CWHAVPSQRPT 290
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 121 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 176 FGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 164
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 225 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 270
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 271 RD------CWHAVPSQRPT 283
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 43/259 (16%)
Query: 9 IAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L S ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 67 CYL-----------FDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
YL ++P L K V + +G+ YL + IHRDL A
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 220
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ ED KI+DFGLAR T + ++ PE +Y+ +SDV+SFG
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 280
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCK-----LM 228
VLL +I + L G +E ++L K G M D+ S+C +M
Sbjct: 281 VLLWEIFT------LGGSPYPGVPVEELFKLLKEGHRM--------DKPSNCTNELYMMM 326
Query: 229 RCLEIALLCVQENPNDRPS 247
R C P+ RP+
Sbjct: 327 RD------CWHAVPSQRPT 339
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 78 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKE 137
LD + I+ I +GL YL + IHRD+KA+N+LL E + K++DFG+A
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 138 SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+K NT VGT ++ PE +Q Y +K+D++S G+ +++ G+
Sbjct: 158 QIKRNT--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEE-FKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GE++AVK L + ++ E+ + L H ++++ G C D E+ LV EY+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYL--QEYSRLTIIHRDLKASNILLGED 120
SL YL R + + + + I +G+ YL Q Y IHR L A N+LL D
Sbjct: 97 GSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDND 147
Query: 121 MKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI DFGLA+ + E + + PE ++ + SDV+SFGV L ++
Sbjct: 148 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
Query: 180 IS 181
++
Sbjct: 208 LT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 6 GEVIAVKKLSKSSAQGFEE-FKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPN 62
GE++AVK L + ++ E+ + L H ++++ G C D E+ LV EY+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYL--QEYSRLTIIHRDLKASNILLGED 120
SL YL R + + + + I +G+ YL Q Y IHR L A N+LL D
Sbjct: 98 GSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDND 148
Query: 121 MKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI DFGLA+ + E + + PE ++ + SDV+SFGV L ++
Sbjct: 149 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
Query: 180 IS 181
++
Sbjct: 209 LT 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 34 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 92
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 93 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAEGMNYLEDRR---LVHRD 139
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 140 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 199
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 200 WSYGVTVWELMT 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 98/182 (53%), Gaps = 23/182 (12%)
Query: 9 IAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+ + MP C
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMP---FGC 102
Query: 68 YLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
L D +R + +L+W + I +G+ YL++ ++HRDL A N+L+
Sbjct: 103 -LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKT 152
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGLA++ E + + E I ++ E +Y+ +SDV+S+GV + ++
Sbjct: 153 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
Query: 180 IS 181
++
Sbjct: 213 MT 214
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 119 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 173
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 174 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
NT + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 31 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 89
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 90 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 136
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 196
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 197 WSYGVTVWELMT 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 43 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 101
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 102 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 148
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 149 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 208
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 209 WSYGVTVWELMT 220
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 120 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 175 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 177 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 95
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 96 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 142
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 203 WSYGVTVWELMT 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 140 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 194
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 195 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 98
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 99 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 145
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 205
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 206 WSYGVTVWELMT 217
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 121 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 175
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 176 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 141 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 195
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 196 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 102
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 103 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 149
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 209
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 210 WSYGVTVWELMT 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 102
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 103 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 149
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 209
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 210 WSYGVTVWELMT 221
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 114 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 168
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 169 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ YL + +HRDL A N +L E K++D
Sbjct: 117 FIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVAD 171
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE + + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 172 FGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 98
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 99 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 145
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 205
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 206 WSYGVTVWELMT 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 31 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 90
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 91 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 143
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 144 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 99
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 100 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 146
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 147 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 206
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 207 WSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 96
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 97 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 143
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 203
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 204 WSYGVTVWELMT 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 96 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 142
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 203 WSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 98
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 99 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 145
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 205
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 206 WSYGVTVWELMT 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 102
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 103 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 149
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 209
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 210 WSYGVTVWELMT 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 98
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 99 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 145
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 205
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 206 WSYGVTVWELMT 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 97
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 98 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 144
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 204
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 205 WSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 96 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 142
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 203 WSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 47 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 105
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 106 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 152
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 153 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 212
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 213 WSYGVTVWELMT 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 97
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 98 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 144
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 204
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 205 WSYGVTVWELMT 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 102/192 (53%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 62 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 120
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 121 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 167
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 168 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 227
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 228 WSYGVTVWELMT 239
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 13/178 (7%)
Query: 8 VIAVKKLSKSS--AQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L KS +G E + + E+ + A L H N++R+ + D L+ EY P
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE 109
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L L + D ++ I+E + L+Y +IHRD+K N+LLG + K
Sbjct: 110 LYKEL---QKSCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELK 163
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
I+DFG + SL+ T + GT+ Y+PPE +++ K D++ GVL +++ G
Sbjct: 164 IADFGWS--VHAPSLRRKT--MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 93 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 145
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDP-IRRLILDWK 81
EE NE+ L L H N+I++ D + LV E+ LF+ I R D
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQIINRHKFDEC 146
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED---MKPKISDFGLARIFAKES 138
+I++ I G+ YL +++ I+HRD+K NILL + KI DFGL+ F+K+
Sbjct: 147 DAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD- 202
Query: 139 LKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+GT YI PE ++ Y+ K DV+S GV++ ++ G
Sbjct: 203 --YKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 26 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVH 85
+ E+ + ++ + + G + + ++ EY+ S D +R D +
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIAT 124
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+++ I +GL YL + IHRD+KA+N+LL E K++DFG+A +K NT
Sbjct: 125 MLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-- 179
Query: 146 VVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
VGT ++ PE +Q Y +K+D++S G+ +++ G+
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 7 EVIAVKKLS-KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E +AVK + K + E K E+ + L H N+++ G + + L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 66 DCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
FD I I + + G++YL + I HRD+K N+LL E K
Sbjct: 92 ----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLK 144
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIISGK 183
ISDFGLA +F + + ++ GT+ Y+ PE R+ ++ DV+S G++L +++G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 102/188 (54%), Gaps = 19/188 (10%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 96
Query: 58 EYMPNKSLDCYLF---DPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+ MP L Y+ D I + +L+W + I +G+ YL++ ++HRDL A
Sbjct: 97 QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 147
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV+S+G
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 174 VLLLQIIS 181
V + ++++
Sbjct: 208 VTVWELMT 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 26 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS-LDCYLFDPIRRLILDWKKRV 84
+ E+ + ++ + R G + S + ++ EY+ S LD P+ +
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----A 119
Query: 85 HIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTE 144
I+ I +GL YL + IHRD+KA+N+LL E K++DFG+A +K N
Sbjct: 120 TILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX- 175
Query: 145 QVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
VGT ++ PE +Q Y K+D++S G+ +++ G+
Sbjct: 176 -FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 102/188 (54%), Gaps = 19/188 (10%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 58 EYMPNKSLDCYLF---DPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+ MP L Y+ D I + +L+W + I +G+ YL++ ++HRDL A
Sbjct: 96 QLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRDLAAR 146
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 174 VLLLQIIS 181
V + ++++
Sbjct: 207 VTVWELMT 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 52/256 (20%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
VI +S+ S++ EE + EV + A ++H N+++ ++ +V +Y C
Sbjct: 53 VIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY-------C 105
Query: 68 YLFDPIRRL------------ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
D +R+ ILDW Q L L+ I+HRD+K+ NI
Sbjct: 106 EGGDLFKRINAQKGVLFQEDQILDW---------FVQICLALKHVHDRKILHRDIKSQNI 156
Query: 116 LLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVL 175
L +D ++ DFG+AR+ S +GT Y+ PE Y+ KSD+++ G +
Sbjct: 157 FLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCV 214
Query: 176 LLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIAL 235
L + L L+HA+E G V + L ++
Sbjct: 215 LYE----------------LCTLKHAFE---AGSMKNLVLKIISGSFPPVSLHYSYDLRS 255
Query: 236 LCVQ---ENPNDRPSM 248
L Q NP DRPS+
Sbjct: 256 LVSQLFKRNPRDRPSV 271
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 8 VIAVKKLSKSS--AQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L KS +G E + + E+ + + L+H N++R+ + D + L+ E+ P
Sbjct: 42 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 101
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L L R D ++ +E + L Y E +IHRD+K N+L+G + K
Sbjct: 102 LYKELQKHGR---FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELK 155
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
I+DFG ++ + + GT+ Y+PPE + K D++ GVL + + G
Sbjct: 156 IADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++I KKLS A+ F++ + E + KLQH N++R+ + LV++ +
Sbjct: 58 AAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 114
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP- 123
L D + R H I+ I + + Y I+HR+LK N+LL K
Sbjct: 115 L---FEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGA 168
Query: 124 --KISDFGLA-RIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
K++DFGLA + E+ GT GY+ PE ++ YS D+++ GV+L ++
Sbjct: 169 AVKLADFGLAIEVNDSEAWHG----FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
Query: 181 SG 182
G
Sbjct: 225 VG 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 8 VIAVKKLSKSS--AQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L KS +G E + + E+ + + L+H N++R+ + D + L+ E+ P
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L L R D ++ +E + L Y E +IHRD+K N+L+G + K
Sbjct: 101 LYKELQKHGR---FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELK 154
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
I+DFG ++ + + GT+ Y+PPE + K D++ GVL + + G
Sbjct: 155 IADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 8 VIAVKKLSKSS--AQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++A+K L KS +G E + + E+ + + L+H N++R+ + D + L+ E+ P
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L L R D ++ +E + L Y E +IHRD+K N+L+G + K
Sbjct: 101 LYKELQKHGR---FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELK 154
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
I+DFG ++ + + GT+ Y+PPE + K D++ GVL + + G
Sbjct: 155 IADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 16/193 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G +A K + + EE KNE+ + +L H NLI++ + +LV EY+
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172
Query: 65 LDCYLFDPIRRLI-LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL-LGEDMK 122
L + D L LD + ++ I +G+ ++ + + I+H DLK NIL + D K
Sbjct: 173 LFDRIIDESYNLTELD---TILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAK 226
Query: 123 P-KISDFGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGLAR + +E LK N GT ++ PE S +D++S GV+ ++
Sbjct: 227 QIKIIDFGLARRYKPREKLKVN----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282
Query: 181 SGKRLSMLCGINE 193
SG LS G N+
Sbjct: 283 SG--LSPFLGDND 293
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRR--LILDWKKRVHI 86
H+N++ +LG C M++ E+ +L YL F P + L D+ H+
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 87 IE---GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANT 143
I + +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 144 EQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
++I KKLS A+ F++ + E + KLQH N++R+ + LV++ + L
Sbjct: 36 AKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP-- 123
D + R H I+ I + + Y I+HR+LK N+LL K
Sbjct: 93 ---FEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 146
Query: 124 -KISDFGLARIFAKESLKANTEQV----VGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
K++DFGLA ++ N + GT GY+ PE ++ YS D+++ GV+L
Sbjct: 147 VKLADFGLA-------IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 199
Query: 179 IISG 182
++ G
Sbjct: 200 LLVG 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 25/195 (12%)
Query: 9 IAVKKLS-KSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+AVK L K+ + E +E+ M+T H N++ +LG C S L++EY L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 67 CYL-------------FDPIRRL-------ILDWKKRVHIIEGITQGLLYLQEYSRLTII 106
YL ++ +RL +L ++ + + +G+ +L+ S +
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CV 194
Query: 107 HRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTK 166
HRDL A N+L+ KI DFGLAR +S + ++ PE +G+Y+ K
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
Query: 167 SDVFSFGVLLLQIIS 181
SDV+S+G+LL +I S
Sbjct: 255 SDVWSYGILLWEIFS 269
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
++I KKLS A+ F++ + E + KLQH N++R+ + LV++ + L
Sbjct: 35 AKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP-- 123
D + R H I+ I + + Y I+HR+LK N+LL K
Sbjct: 92 ---FEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAA 145
Query: 124 -KISDFGLARIFAKESLKANTEQV----VGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
K++DFGLA ++ N + GT GY+ PE ++ YS D+++ GV+L
Sbjct: 146 VKLADFGLA-------IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI 198
Query: 179 IISG 182
++ G
Sbjct: 199 LLVG 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++I KKLS A+ F++ + E + KLQH N++R+ + LV++ +
Sbjct: 35 AAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP- 123
L D + R H I+ I + + Y I+HR+LK N+LL K
Sbjct: 92 L---FEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGA 145
Query: 124 --KISDFGLARIFAKESLKANTEQV----VGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
K++DFGLA ++ N + GT GY+ PE ++ YS D+++ GV+L
Sbjct: 146 AVKLADFGLA-------IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198
Query: 178 QIISG 182
++ G
Sbjct: 199 ILLVG 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 78 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKE 137
LD + I+ I +GL YL + IHRD+KA+N+LL E + K++DFG+A
Sbjct: 116 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
Query: 138 SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+K N VGT ++ PE +Q Y +K+D++S G+ +++ G+
Sbjct: 173 QIKRNX--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
G++ A+K + KS A +NE+ + K++H N++ + + LV + + L
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 66 DCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GEDM 121
FD I R + K +I+ + + YL E I+HRDLK N+L E+
Sbjct: 94 ----FDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENS 146
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K I+DFGL+++ GT GY+ PE Q YS D +S GV+
Sbjct: 147 KIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI------ 196
Query: 182 GKRLSMLCGINENLSILEHA-YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQE 240
+LCG E +E K G EF F DD + S K C +++
Sbjct: 197 --TYILLCGYPPFYEETESKLFEKIKEGY-YEFESPFWDDISESAKDFIC-----HLLEK 248
Query: 241 NPNDR 245
+PN+R
Sbjct: 249 DPNER 253
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 78 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKE 137
LD + I+ I +GL YL + IHRD+KA+N+LL E + K++DFG+A
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 138 SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
+K N VGT ++ PE +Q Y +K+D++S G+ +++ G+
Sbjct: 158 QIKRNX--FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
IA+K++ + ++ + E+ L L+H N+++ LG ++ + E +P SL
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP-KISD 127
L L + + + I +GL YL + I+HRD+K N+L+ KISD
Sbjct: 110 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISD 166
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV--YSTKSDVFSFGVLLLQIISGK 183
FG ++ A + TE GT+ Y+ PE +G Y +D++S G ++++ +GK
Sbjct: 167 FGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCID-SEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 140 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 151 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCID-SEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 140 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L H +++ GF D++ +V E +
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 102
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L RR L + + + I G YL R +IHRDLK N+ L ED++
Sbjct: 103 SL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEV 156
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA + + T + GT YI PE + +S + DV+S G ++ ++ GK
Sbjct: 157 KIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 48/256 (18%)
Query: 5 CGEVIAVKKLSKSSAQGFEE-FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G++ AVK + K + +G E +NE+ + K++H N++ + LV + +
Sbjct: 46 TGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGG 105
Query: 64 SLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GE 119
L FD I + K +I + + YL R+ I+HRDLK N+L E
Sbjct: 106 EL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDE 158
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+ K ISDFGL+++ K + + GT GY+ PE Q YS D +S GV+
Sbjct: 159 ESKIMISDFGLSKMEGKGDVMST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA--- 212
Query: 180 ISGKRLSMLCG----INENLS-----ILEHAYELWKGGKGMEFVDSFLDDRNSSCK-LMR 229
+LCG +EN S IL+ Y EF + DD + S K +R
Sbjct: 213 -----YILLCGYPPFYDENDSKLFEQILKAEY---------EFDSPYWDDISDSAKDFIR 258
Query: 230 CLEIALLCVQENPNDR 245
L ++++PN R
Sbjct: 259 NL------MEKDPNKR 268
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L H +++ GF D++ +V E +
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 102
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L RR L + + + I G YL R +IHRDLK N+ L ED++
Sbjct: 103 SL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEV 156
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA + + T + GT YI PE + +S + DV+S G ++ ++ GK
Sbjct: 157 KIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L H +++ GF D++ +V E +
Sbjct: 47 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 106
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L RR L + + + I G YL R +IHRDLK N+ L ED++
Sbjct: 107 SL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEV 160
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA + + T + GT YI PE + +S + DV+S G ++ ++ GK
Sbjct: 161 KIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRR---LILDWKKRVH 85
H+N++ +LG C M++ E+ +L YL F P + L D+ H
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 86 II---EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKAN 142
+I + +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 143 TEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
IA+K++ + ++ + E+ L L+H N+++ LG ++ + E +P SL
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP-KISD 127
L L + + + I +GL YL + I+HRD+K N+L+ KISD
Sbjct: 96 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISD 152
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV--YSTKSDVFSFGVLLLQIISGK 183
FG ++ A + TE GT+ Y+ PE +G Y +D++S G ++++ +GK
Sbjct: 153 FGTSKRLA--GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 20/190 (10%)
Query: 8 VIAVKKL-SKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
+AVK L ++ + + +E+ M+ +H N+I +LG C ++ EY +L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 66 DCYL-----------FDPIRRLI---LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLK 111
YL +D I R+ + +K V + +G+ YL + IHRDL
Sbjct: 129 REYLRARRPPGMEYSYD-INRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 184
Query: 112 ASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
A N+L+ E+ KI+DFGLAR T + ++ PE VY+ +SDV+S
Sbjct: 185 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 172 FGVLLLQIIS 181
FGVL+ +I +
Sbjct: 245 FGVLMWEIFT 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 10 AVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEE-RMLVYEYMPNKSLDC 67
A+K LS+ + Q E F E +L L H N++ ++G + E ++ YM + L
Sbjct: 53 AIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ 112
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ P R + K + + +G+ YL E +HRDL A N +L E K++D
Sbjct: 113 FIRSPQRNPTV--KDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVAD 167
Query: 128 FGLAR-IFAKESLKANTEQVVG-TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR I +E + + + E + ++TKSDV+SFGVLL ++++
Sbjct: 168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 99
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 100 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 146
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFG A++ E + + E I ++ E +Y+ +SDV
Sbjct: 147 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 206
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 207 WSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 97
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 98 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 144
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFG A++ E + + E I ++ E +Y+ +SDV
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 204
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 205 WSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIM 97
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 98 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 144
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFG A++ E + + E I ++ E +Y+ +SDV
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 204
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 205 WSYGVTVWELMT 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 146
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 147 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 149
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 150 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 28 EVMLTAKLQ---HVNLIRVLGFCIDSE-----ERMLVYEYMPNKSLDCYLFDPIRRLILD 79
EV L +L+ H N++R++ C S + LV+E++ ++ L YL D L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLP 110
Query: 80 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL 139
+ ++ +GL +L I+HRDLK NIL+ K++DFGLARI+ S
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 164
Query: 140 KANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 193
+ + VV T+ Y PE Q Y+T D++S G + ++ +R + CG +E
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 102
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 103 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 149
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFG A++ E + + E I ++ E +Y+ +SDV
Sbjct: 150 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 209
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 210 WSYGVTVWELMT 221
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 144
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 145 DLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 95
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 96 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 142
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFG A++ E + + E I ++ E +Y+ +SDV
Sbjct: 143 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 202
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 203 WSYGVTVWELMT 214
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 123 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 128 FGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR + + N + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 178 FGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLK 140
K+ + +I Q L + + IIHRD+K +NIL+ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 141 -ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T V+GT Y+ PE AR +SDV+S G +L ++++G+
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K+L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 97
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 98 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 144
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFG A++ E + + E I ++ E +Y+ +SDV
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 204
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 205 WSYGVTVWELMT 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 128 FGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR + + N + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 123 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 177
Query: 128 FGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR + + N + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 178 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 181 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 235
Query: 128 FGLAR-IFAKE--SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE S+ T + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 236 FGLARDMYDKEFDSVHNKTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 101/192 (52%), Gaps = 27/192 (14%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+ +L + +S + +E +E + A + + ++ R+LG C+ S + L+
Sbjct: 71 IPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 129
Query: 58 EYMPNKSLDCYLFDPIR--------RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRD 109
+ MP C L D +R + +L+W + I +G+ YL++ ++HRD
Sbjct: 130 QLMP---FGC-LLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEDRR---LVHRD 176
Query: 110 LKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
L A N+L+ KI+DFGLA++ E + + E I ++ E +Y+ +SDV
Sbjct: 177 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 236
Query: 170 FSFGVLLLQIIS 181
+S+GV + ++++
Sbjct: 237 WSYGVTVWELMT 248
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 122 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 176
Query: 128 FGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR + + N + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 177 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHII 87
E+ L +L H N+I+ I+ E +V E L R+I +KK+ +I
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLS--------RMIKHFKKQKRLI 133
Query: 88 EGITQGLLYLQEYSRL------TIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
T ++Q S L ++HRD+K +N+ + K+ D GL R F+ ++ A
Sbjct: 134 PERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHA 201
++ +VGT Y+ PE + Y+ KSD++S G LL ++ + + S G NL
Sbjct: 194 HS--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYGDKMNL------ 243
Query: 202 YELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALLCVQENPNDRPSMLEVSSMLK 256
Y L K + ++ D + + ++ +C+ +P RP + V + K
Sbjct: 244 YSLCKKIEQCDYPPLPSDHYSEELR-----QLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 127 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 181
Query: 128 FGLAR-IFAKE--SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR ++ KE S+ T + + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 182 FGLARDMYDKEFDSVHNKTGAKL-PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 203
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 204 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 10 AVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSE-ERMLVYEYMPNKSLDC 67
AVK L++ + G +F E ++ H N++ +LG C+ SE ++V YM + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
++ + + K + + +G+ +L + +HRDL A N +L E K++D
Sbjct: 120 FIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 174
Query: 128 FGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGLAR + + N + ++ E + ++TKSDV+SFGVLL ++++
Sbjct: 175 FGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 140 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN- 62
G +A+K++ S +G E+ L +L+H N++R+ + LV+E+M N
Sbjct: 29 TGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDND 88
Query: 63 --KSLDC-YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D + + R L L+ K + + QGL + E I+HRDLK N+L+ +
Sbjct: 89 LKKYMDSRTVGNTPRGLELNLVK--YFQWQLLQGLAFCHENK---ILHRDLKPQNLLINK 143
Query: 120 DMKPKISDFGLARIFAKESLKANT-EQVVGTIGYIPPEYARQG-VYSTKSDVFSFGVLLL 177
+ K+ DFGLAR F + NT V T+ Y P+ YST D++S G +L
Sbjct: 144 RGQLKLGDFGLARAFG---IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILA 200
Query: 178 QIISGKRLSMLCGINE 193
++I+GK L G N+
Sbjct: 201 EMITGKPL--FPGTND 214
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLK 140
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 141 -ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T V+GT Y+ PE AR +SDV+S G +L ++++G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCI-DSEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 186 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLK 140
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 141 -ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T V+GT Y+ PE AR +SDV+S G +L ++++G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLK 140
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 141 -ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T V+GT Y+ PE AR +SDV+S G +L ++++G+
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 78 LDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKE 137
+ K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 138 SLK-ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T V+GT Y+ PE AR +SDV+S G +L ++++G+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 36 QHVNLIRVLGFCID-SEERMLVYEYMPNKSLDCYL------FDPIRRLILDWKKRVHIIE 88
H+N++ +LG C M++ E+ +L YL F P + D K +E
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 89 G-------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
+ +G+ +L + IHRDL A NILL E KI DFGLAR K+
Sbjct: 140 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+SFGVLL +I S
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 5 CGEVIAVKKLSKSSAQ---GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
G+ AVK +SK + E EV L +L H N++++ F D LV E
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109
Query: 62 NKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--- 117
L FD I R II + G+ Y+ + I+HRDLK N+LL
Sbjct: 110 GGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 162
Query: 118 GEDMKPKISDFGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
+D +I DFGL+ F A + +K +GT YI PE G Y K DV+S GV+L
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDK----IGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 217
Query: 177 LQIISG 182
++SG
Sbjct: 218 YILLSG 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L H +++ GF D++ +V E +
Sbjct: 41 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L RR L + + + I G YL R +IHRDLK N+ L ED++
Sbjct: 101 SL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEV 154
Query: 124 KISDFGLARIFAKESLKANTEQVV-GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLA K ++V+ GT YI PE + +S + DV+S G ++ ++ G
Sbjct: 155 KIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211
Query: 183 K 183
K
Sbjct: 212 K 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 21/171 (12%)
Query: 17 SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL---DCYLFDPI 73
S +++FKNE+ + +++ + G + +E ++YEYM N S+ D Y F
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF--- 138
Query: 74 RRLILDWKKR----VHIIEGITQGLLYLQEY--SRLTIIHRDLKASNILLGEDMKPKISD 127
+LD + +I+ I + +L Y + I HRD+K SNIL+ ++ + K+SD
Sbjct: 139 ---VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD 195
Query: 128 FGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYS-TKSDVFSFGVLL 176
FG + + +K + GT ++PPE ++ + Y+ K D++S G+ L
Sbjct: 196 FGESEYMVDKKIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLK 140
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR A
Sbjct: 133 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 141 -ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T V+GT Y+ PE AR +SDV+S G +L ++++G+
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 28 EVMLTAKLQ---HVNLIRVLGFCIDSE-----ERMLVYEYMPNKSLDCYLFDPIRRLILD 79
EV L +L+ H N++R++ C S + LV+E++ ++ L YL D L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLP 110
Query: 80 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL 139
+ ++ +GL +L I+HRDLK NIL+ K++DFGLARI+ S
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 164
Query: 140 KANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 193
+ VV T+ Y PE Q Y+T D++S G + ++ +R + CG +E
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 28 EVMLTAKLQ---HVNLIRVLGFCIDSE-----ERMLVYEYMPNKSLDCYLFDPIRRLILD 79
EV L +L+ H N++R++ C S + LV+E++ ++ L YL D L
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLP 118
Query: 80 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL 139
+ ++ +GL +L I+HRDLK NIL+ K++DFGLARI+ S
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 172
Query: 140 KANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 193
+ VV T+ Y PE Q Y+T D++S G + ++ +R + CG +E
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 224
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ EY +L YL +D I R+ + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ +I+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 9 IAVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + + EE E + +L + ++R++G C +E MLV E L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 98
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L +R + ++ ++ G+ YL+E + +HRDL A N+LL KISD
Sbjct: 99 FLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISD 153
Query: 128 FGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
FGL++ A +S + + PE +S++SDV+S+GV + + +S
Sbjct: 154 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 5 CGEVIAVKKLSKSSAQ---GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
G+ AVK +SK + E EV L +L H N++++ F D LV E
Sbjct: 73 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 132
Query: 62 NKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--- 117
L FD I R II + G+ Y+ + I+HRDLK N+LL
Sbjct: 133 GGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 185
Query: 118 GEDMKPKISDFGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
+D +I DFGL+ F A + +K +GT YI PE G Y K DV+S GV+L
Sbjct: 186 SKDANIRIIDFGLSTHFEASKKMKDK----IGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 240
Query: 177 LQIISG 182
++SG
Sbjct: 241 YILLSG 246
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L H +++ GF D++ +V E +
Sbjct: 65 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 124
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L RR L + + + I G YL R +IHRDLK N+ L ED++
Sbjct: 125 SL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEV 178
Query: 124 KISDFGLARIFAKESLKANTEQVV-GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLA K ++V+ GT YI PE + +S + DV+S G ++ ++ G
Sbjct: 179 KIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 235
Query: 183 K 183
K
Sbjct: 236 K 236
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +G+ +L S IHRDL A NILL E+ KI DFGLAR K
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE +YSTKSDV+S+GVLL +I S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 5 CGEVIAVKKLSKSSAQ---GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
G+ AVK +SK + E EV L +L H N++++ F D LV E
Sbjct: 74 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 133
Query: 62 NKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--- 117
L FD I R II + G+ Y+ + I+HRDLK N+LL
Sbjct: 134 GGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 186
Query: 118 GEDMKPKISDFGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
+D +I DFGL+ F A + +K +GT YI PE G Y K DV+S GV+L
Sbjct: 187 SKDANIRIIDFGLSTHFEASKKMKDK----IGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 241
Query: 177 LQIISG 182
++SG
Sbjct: 242 YILLSG 247
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L H +++ GF D++ +V E +
Sbjct: 67 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL L RR L + + + I G YL R +IHRDLK N+ L ED++
Sbjct: 127 SL---LELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEV 180
Query: 124 KISDFGLARIFAKESLKANTEQVV-GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLA K ++V+ GT YI PE + +S + DV+S G ++ ++ G
Sbjct: 181 KIGDFGLA---TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237
Query: 183 K 183
K
Sbjct: 238 K 238
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 35 LQHVNLIRVLGFCI----DSEERM-LVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEG 89
+H N++R+ C D E ++ LV+E++ ++ L YL D + + + ++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQ 128
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +GL +L + ++HRDLK NIL+ + K++DFGLARI+ S + VV T
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 182
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
+ Y PE Q Y+T D++S G + ++ K L
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 5 CGEVIAVKKLSKSSAQ---GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
G+ AVK +SK + E EV L +L H N++++ F D LV E
Sbjct: 56 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 115
Query: 62 NKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--- 117
L FD I R II + G+ Y+ + I+HRDLK N+LL
Sbjct: 116 GGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESK 168
Query: 118 GEDMKPKISDFGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
+D +I DFGL+ F A + +K +GT YI PE G Y K DV+S GV+L
Sbjct: 169 SKDANIRIIDFGLSTHFEASKKMKDK----IGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 223
Query: 177 LQIISG 182
++SG
Sbjct: 224 YILLSG 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 35 LQHVNLIRVLGFCI----DSEERM-LVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEG 89
+H N++R+ C D E ++ LV+E++ ++ L YL D + + + ++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQ 128
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +GL +L + ++HRDLK NIL+ + K++DFGLARI+ S + VV T
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 182
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
+ Y PE Q Y+T D++S G + ++ K L
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 35 LQHVNLIRVLGFCI----DSEERM-LVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEG 89
+H N++R+ C D E ++ LV+E++ ++ L YL D + + + ++
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQ 128
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +GL +L + ++HRDLK NIL+ + K++DFGLARI+ S + VV T
Sbjct: 129 LLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 182
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRL 185
+ Y PE Q Y+T D++S G + ++ K L
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 29/195 (14%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--------MLVYE 58
E +AVK Q ++ + EV ++H N+++ +G +E+R L+
Sbjct: 48 EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIG----AEKRGTSVDVDLWLITA 102
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQE-------YSRLTIIHRDLK 111
+ SL D ++ ++ W + HI E + +GL YL E + I HRD+K
Sbjct: 103 FHEKGSLS----DFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158
Query: 112 ASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---- 167
+ N+LL ++ I+DFGLA F +T VGT Y+ PE + +
Sbjct: 159 SKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR 218
Query: 168 -DVFSFGVLLLQIIS 181
D+++ G++L ++ S
Sbjct: 219 IDMYAMGLVLWELAS 233
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 33/204 (16%)
Query: 5 CGEVIAVKKLS---KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEY 59
GEV+AVKK+ ++S F+ ++LT H N++ +L +R LV++Y
Sbjct: 33 TGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
M + L IR IL+ + +++ + + + YL ++HRD+K SNILL
Sbjct: 93 M-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNA 144
Query: 120 DMKPKISDFGLARIFAK---------ESLKANTEQV----------VGTIGYIPPEYARQ 160
+ K++DFGL+R F S+ NTE V T Y PE
Sbjct: 145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204
Query: 161 GVYSTKS-DVFSFGVLLLQIISGK 183
TK D++S G +L +I+ GK
Sbjct: 205 STKYTKGIDMWSLGCILGEILCGK 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 28 EVMLTAKLQ---HVNLIRVLGFCIDSE-----ERMLVYEYMPNKSLDCYLFDPIRRLILD 79
EV L +L+ H N++R++ C S + LV+E++ ++ L YL D L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLP 110
Query: 80 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL 139
+ ++ +GL +L I+HRDLK NIL+ K++DFGLARI+ S
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 164
Query: 140 KANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINE 193
+ VV T+ Y PE Q Y+T D++S G + ++ +R + CG +E
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K++ S + + F E+ +++ H N++++ G C++ LV EY SL
Sbjct: 35 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNV 90
Query: 69 LF--DPIRRLILDWKKRVHIIEGI---TQGLLYLQEYSRLTIIHRDLKASNILL-GEDMK 122
L +P L + H + +QG+ YL +IHRDLK N+LL
Sbjct: 91 LHGAEP-----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 145
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFG A ++ + G+ ++ PE YS K DVFS+G++L ++I+
Sbjct: 146 LKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 200
Query: 183 KR 184
++
Sbjct: 201 RK 202
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+A+K++ S + + F E+ +++ H N++++ G C++ LV EY SL
Sbjct: 34 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNV 89
Query: 69 LF--DPIRRLILDWKKRVHIIEGI---TQGLLYLQEYSRLTIIHRDLKASNILL-GEDMK 122
L +P L + H + +QG+ YL +IHRDLK N+LL
Sbjct: 90 LHGAEP-----LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV 144
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFG A ++ + G+ ++ PE YS K DVFS+G++L ++I+
Sbjct: 145 LKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 199
Query: 183 KR 184
++
Sbjct: 200 RK 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L+ +++RDLK +NILL E +ISD GLA F+K+ A+ VGT GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 154 PPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
PE ++GV Y + +D FS G +L +++ G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L+ +++RDLK +NILL E +ISD GLA F+K+ A+ VGT GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 154 PPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
PE ++GV Y + +D FS G +L +++ G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L+ +++RDLK +NILL E +ISD GLA F+K+ A+ VGT GY+
Sbjct: 301 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 356
Query: 154 PPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
PE ++GV Y + +D FS G +L +++ G
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L+ +++RDLK +NILL E +ISD GLA F+K+ A+ VGT GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 154 PPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
PE ++GV Y + +D FS G +L +++ G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 6 GEVIAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRV------LGFCIDSEERMLVYE 58
GE +A+K+ + S + E + E+ + KL H N++ L ++ +L E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 59 YMPNKSLDCYLFD----------PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 108
Y L YL PIR L+ D I+ L YL E IIHR
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSD----------ISSALRYLHENR---IIHR 145
Query: 109 DLKASNILL---GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
DLK NI+L + + KI D G A+ + L + VGT+ Y+ PE Q Y+
Sbjct: 146 DLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTV 202
Query: 166 KSDVFSFGVLLLQIISGKR 184
D +SFG L + I+G R
Sbjct: 203 TVDYWSFGTLAFECITGFR 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+++ V K + S E+ K E + L+H +++ +L +V+E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 113
Query: 67 CYLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG--ED 120
F+ ++R + H + I + L Y + + IIHRD+K N+LL E+
Sbjct: 114 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKEN 168
Query: 121 MKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
P K+ DFG+A + L A VGT ++ PE ++ Y DV+ GV+L +
Sbjct: 169 SAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
Query: 180 ISG 182
+SG
Sbjct: 227 LSG 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 6 GEVIAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRV------LGFCIDSEERMLVYE 58
GE +A+K+ + S + E + E+ + KL H N++ L ++ +L E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 59 YMPNKSLDCYLFD----------PIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 108
Y L YL PIR L+ D I+ L YL E IIHR
Sbjct: 100 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSD----------ISSALRYLHENR---IIHR 146
Query: 109 DLKASNILL---GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
DLK NI+L + + KI D G A+ + L + VGT+ Y+ PE Q Y+
Sbjct: 147 DLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTV 203
Query: 166 KSDVFSFGVLLLQIISGKR 184
D +SFG L + I+G R
Sbjct: 204 TVDYWSFGTLAFECITGFR 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G+++A+K++ S +E E+ + + ++++ G + + +V EY S
Sbjct: 53 TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
+ + +R L + I++ +GL YL + IHRD+KA NILL + K
Sbjct: 111 VSDIIR--LRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAK 165
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
++DFG+A K N V+GT ++ PE ++ Y+ +D++S G+ +++ GK
Sbjct: 166 LADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ Y +L YL +D I R+ + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 5 CGEVIAVKKLSKSSAQ---GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
G+ AVK +SK + E EV L +L H N+ ++ F D LV E
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYT 109
Query: 62 NKSLDCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--- 117
L FD I R II + G+ Y + I+HRDLK N+LL
Sbjct: 110 GGEL----FDEIISRKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESK 162
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+D +I DFGL+ F E+ K +++ GT YI PE G Y K DV+S GV+L
Sbjct: 163 SKDANIRIIDFGLSTHF--EASKKXKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 218
Query: 178 QIISG 182
++SG
Sbjct: 219 ILLSG 223
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 90
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 91 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 137
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 198 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 6 GEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G ++A+K++ + +G E+ L +L H N++ ++ LV+E+M K
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EK 103
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
L L D + + D + ++++ + + +G+ + ++ I+HRDLK N+L+ D
Sbjct: 104 DLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQHR---ILHRDLKPQNLLINSDGAL 158
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-ARQGVYSTKSDVFSFGVLLLQIISG 182
K++DFGLAR F +++ T +VV T+ Y P+ YST D++S G + ++I+G
Sbjct: 159 KLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
Query: 183 KRL 185
K L
Sbjct: 217 KPL 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 42 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 100
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 101 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 147
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 208 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 6 GEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G ++A+K++ + +G E+ L +L H N++ ++ LV+E+M K
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EK 103
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
L L D + + D + ++++ + + +G+ + ++ I+HRDLK N+L+ D
Sbjct: 104 DLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQHR---ILHRDLKPQNLLINSDGAL 158
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-ARQGVYSTKSDVFSFGVLLLQIISG 182
K++DFGLAR F +++ T +VV T+ Y P+ YST D++S G + ++I+G
Sbjct: 159 KLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
Query: 183 KRL 185
K L
Sbjct: 217 KPL 219
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G+ +AVK + K+ ++ ++ EV + L H N++++ + LV EY
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL + W K Q + +Q + I+HRDLKA N+LL DM
Sbjct: 91 GEVFDYL------VAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN 144
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F + + G+ Y PE + Y + DV+S GV+L ++S
Sbjct: 145 IKIADFGFSNEF---TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
Query: 182 G 182
G
Sbjct: 202 G 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 28/168 (16%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE--------ERMLVYEYM 60
+AVK S ++ Q F KN + ++H N+ R F + E E +LV EY
Sbjct: 39 VAVKVFSFANRQNFINEKN-IYRVPLMEHDNIAR---FIVGDERVTADGRMEYLLVMEYY 94
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ------EYSRLTIIHRDLKASN 114
PN SL YL DW + +T+GL YL ++ + I HRDL + N
Sbjct: 95 PNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN 150
Query: 115 ILLGEDMKPKISDFGLA-RIFAKESLKANTEQ-----VVGTIGYIPPE 156
+L+ D ISDFGL+ R+ ++ E VGTI Y+ PE
Sbjct: 151 VLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 36 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 94
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 95 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 141
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 202 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 244 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 36 QHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL-----------FDPIRRLI---LDWK 81
+H N+I +LG C ++ Y +L YL +D I R+ + +K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFK 157
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA 141
V + +G+ YL + IHRDL A N+L+ E+ KI+DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
T + ++ PE VY+ +SDV+SFGVL+ +I +
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 90
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 91 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 137
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 198 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 90
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 91 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 137
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 198 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 36 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 94
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 95 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 141
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 202 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 244 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L + +++ GF D + +V E +
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 127
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL R+ + + + R + + I QG+ YL +IHRDLK N+ L +DM
Sbjct: 128 SL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDV 181
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA + + T + GT YI PE + +S + D++S G +L ++ GK
Sbjct: 182 KIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 50/270 (18%)
Query: 4 PCGEVI--AVKKLSK---SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYE 58
P G+ + AVK L S + ++F EV L H NLIR+ G + +M V E
Sbjct: 42 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTE 100
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--------ITQGLLYLQEYSRLTIIHRDL 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 101 LAPLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDL 147
Query: 111 KASNILLGEDMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYSTKSDV 169
A N+LL KI DFGL R + + E + PE + +S SD
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+ FGV L ++ + + E W G G + + + +
Sbjct: 208 WMFGVTLWEMFT------------------YGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 230 CLE----IALLCVQENPNDRPSMLEVSSML 255
C + + + C P DRP+ + + L
Sbjct: 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
++I KKLS A+ ++ + E + L+H N++R+ + L+++ +
Sbjct: 51 AAKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE 107
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP- 123
L D + R H I+ I + +L+ + + ++HRDLK N+LL +K
Sbjct: 108 L---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGA 161
Query: 124 --KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K++DFGLA E + GT GY+ PE R+ Y D+++ GV+L ++
Sbjct: 162 AVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 219
Query: 182 G 182
G
Sbjct: 220 G 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 29/253 (11%)
Query: 9 IAVKKLSKSSAQG-FEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+K L + + + EE E + +L + ++R++G C +E MLV E L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 424
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
+L +R + ++ ++ G+ YL+E + +HR+L A N+LL KISD
Sbjct: 425 FLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISD 479
Query: 128 FGLARIF-AKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLS 186
FGL++ A +S + + PE +S++SDV+S+GV +
Sbjct: 480 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW--------- 530
Query: 187 MLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL---CVQENPN 243
E LS + Y+ KG + M F++ + C E+ L C
Sbjct: 531 ------EALSYGQKPYKKMKGPEVMAFIEQ---GKRMECPPECPPELYALMSDCWIYKWE 581
Query: 244 DRPSMLEVSSMLK 256
DRP L V ++
Sbjct: 582 DRPDFLTVEQRMR 594
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHII 87
EV L L+H N++ + + LV+EY+ +K L YL D +I ++ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYL-DDCGNIINMHNVKLFLF 107
Query: 88 EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVV 147
+ + +GL Y R ++HRDLK N+L+ E + K++DFGLAR AK + V
Sbjct: 108 Q-LLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEV 161
Query: 148 GTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSIL 198
T+ Y PP+ YST+ D++ G + ++ +G+ L + E L +
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 6 GEVIAVKKLSKSSAQGFEE--FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G ++A+KK +S + E+ L +L+H NL+ +L C + LV+E++ +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
LD P LD++ + I G+ + ++ IIHRD+K NIL+ +
Sbjct: 110 ILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVV 163
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
K+ DFG AR A + E V T Y PE V Y DV++ G L+ ++ G
Sbjct: 164 KLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 183 KRL 185
+ L
Sbjct: 222 EPL 224
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 7 EVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
+++A+K ++K + +G E +NE+ + K++H N++ + L+ + + L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 66 DCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL---LGEDM 121
FD I + + +I + + YL + L I+HRDLK N+L L ED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K ISDFGL+++ E + GT GY+ PE Q YS D +S GV+ ++
Sbjct: 157 KIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 182 G 182
G
Sbjct: 214 G 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 7 EVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
+++A+K ++K + +G E +NE+ + K++H N++ + L+ + + L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 66 DCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL---LGEDM 121
FD I + + +I + + YL + L I+HRDLK N+L L ED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K ISDFGL+++ E + GT GY+ PE Q YS D +S GV+ ++
Sbjct: 157 KIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 182 G 182
G
Sbjct: 214 G 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 7 EVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
+++A+K ++K + +G E +NE+ + K++H N++ + L+ + + L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 66 DCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL---LGEDM 121
FD I + + +I + + YL + L I+HRDLK N+L L ED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K ISDFGL+++ E + GT GY+ PE Q YS D +S GV+ ++
Sbjct: 157 KIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 182 G 182
G
Sbjct: 214 G 214
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER------MLVYEYM 60
+AVK L ++ EEF E + H ++ +++G + S + M++ +M
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 61 PNKSLDCYLF------DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
+ L +L +P L + V + I G+ YL S IHRDL A N
Sbjct: 114 KHGDLHAFLLASRIGENPFN---LPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARN 167
Query: 115 ILLGEDMKPKISDFGLAR-IFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
+L EDM ++DFGL+R I++ + + + + ++ E +Y+ SDV++FG
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL-PVKWLALESLADNLYTVHSDVWAFG 226
Query: 174 VLLLQIIS 181
V + +I++
Sbjct: 227 VTMWEIMT 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 7 EVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
+++A+K ++K + +G E +NE+ + K++H N++ + L+ + + L
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 66 DCYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL---LGEDM 121
FD I + + +I + + YL + L I+HRDLK N+L L ED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K ISDFGL+++ E + GT GY+ PE Q YS D +S GV+ ++
Sbjct: 157 KIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 182 G 182
G
Sbjct: 214 G 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERML--VYEYMPNKSLDCYLFDPIRRLILDW 80
E+ E+ + KL H N+++++ D E L V+E + + + P + + +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSED 137
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF-AKESL 139
+ R + + + +G+ YL Y + IIHRD+K SN+L+GED KI+DFG++ F ++L
Sbjct: 138 QARFYF-QDLIKGIEYLH-YQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 140 KANTEQVVGTIGYIPPEYARQG--VYSTKS-DVFSFGVLLLQIISGK 183
+NT VGT ++ PE + ++S K+ DV++ GV L + G+
Sbjct: 194 LSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 11 VKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLF 70
+KK S ++ +EV + +L H N++++ F D LV E LF
Sbjct: 37 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE----LF 92
Query: 71 DPI--RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GEDMKPKI 125
D I R+ + V I++ + G YL +++ I+HRDLK N+LL D KI
Sbjct: 93 DEIILRQKFSEVDAAV-IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKI 148
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGL+ F + ++ +GT YI PE R+ Y K DV+S GV+L ++ G
Sbjct: 149 VDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 201
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L + +++ GF D + +V E +
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 127
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL R+ + + + R + + I QG+ YL +IHRDLK N+ L +DM
Sbjct: 128 SL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDV 181
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA E + + GT YI PE + +S + D++S G +L ++ GK
Sbjct: 182 KIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L + +++ GF D + +V E +
Sbjct: 52 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 111
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL R+ + + + R + + I QG+ YL +IHRDLK N+ L +DM
Sbjct: 112 SL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDV 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA + + + + GT YI PE + +S + D++S G +L ++ GK
Sbjct: 166 KIGDFGLATKIEFDGERK--KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 11 VKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLF 70
+KK S ++ +EV + +L H N++++ F D LV E LF
Sbjct: 54 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE----LF 109
Query: 71 DPI--RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GEDMKPKI 125
D I R+ + V I++ + G YL +++ I+HRDLK N+LL D KI
Sbjct: 110 DEIILRQKFSEVDAAV-IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKI 165
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGL+ F + ++ +GT YI PE R+ Y K DV+S GV+L ++ G
Sbjct: 166 VDFGLSAHF---EVGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 218
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 197 MVT--RRALFPGDSE 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
++I KKLS A+ ++ + E + L+H N++R+ + LV++ + L
Sbjct: 34 AKIINTKKLS---ARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP-- 123
D + R H I+ I + +L+ + + ++HRDLK N+LL K
Sbjct: 91 ---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAA 144
Query: 124 -KISDFGLARIFAKESLKANTEQ-----VVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
K++DFGLA ++ +Q GT GY+ PE R+ Y D+++ GV+L
Sbjct: 145 VKLADFGLA-------IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILY 197
Query: 178 QIISG 182
++ G
Sbjct: 198 ILLVG 202
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%)
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
IHRDL A NILL E KI DFGLAR K+ + ++ PE VY+
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 166 KSDVFSFGVLLLQIIS 181
+SDV+SFGVLL +I S
Sbjct: 273 QSDVWSFGVLLWEIFS 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 94 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 145
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 146 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAE 203
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 204 MVT--RRALFPGDSE 216
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%)
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
IHRDL A NILL E KI DFGLAR K+ + ++ PE VY+
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 166 KSDVFSFGVLLLQIIS 181
+SDV+SFGVLL +I S
Sbjct: 275 QSDVWSFGVLLWEIFS 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%)
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
IHRDL A NILL E KI DFGLAR K+ + ++ PE VY+
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 166 KSDVFSFGVLLLQIIS 181
+SDV+SFGVLL +I S
Sbjct: 280 QSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%)
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYST 165
IHRDL A NILL E KI DFGLAR K+ + ++ PE VY+
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 166 KSDVFSFGVLLLQIIS 181
+SDV+SFGVLL +I S
Sbjct: 282 QSDVWSFGVLLWEIFS 297
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 7 EVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
EV A K + KS E+ E+ + L + +++ GF D + +V E +
Sbjct: 68 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 127
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
SL R+ + + + R + + I QG+ YL +IHRDLK N+ L +DM
Sbjct: 128 SL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNR---VIHRDLKLGNLFLNDDMDV 181
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLA E + + GT YI PE + +S + D++S G +L ++ GK
Sbjct: 182 KIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 34 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 94 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 145
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 146 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 203
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 204 MVT--RRALFPGDSE 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 19/188 (10%)
Query: 3 LPCGE----VIAVKKLSK-SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVY 57
+P GE +A+K L + +S + +E +E + A + + R+LG C+ S + LV
Sbjct: 39 IPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVT 97
Query: 58 EYMPNKSLDCYLFDPIRRL----ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKAS 113
+ MP L ++ + RL +L+W + I +G+ YL++ + ++HRDL A
Sbjct: 98 QLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED---VRLVHRDLAAR 148
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFG 173
N+L+ KI+DFGLAR+ + + + + I ++ E + ++ +SDV+S+G
Sbjct: 149 NVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYG 208
Query: 174 VLLLQIIS 181
V + ++++
Sbjct: 209 VTVWELMT 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 91 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 142
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 143 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 200
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 201 MVT--RRALFPGDSE 213
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 86 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 137
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 138 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 179 IISGKRL 185
+++ + L
Sbjct: 196 MVTRRAL 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 86 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 137
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 138 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 179 IISGKRL 185
+++ + L
Sbjct: 196 MVTRRAL 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 88 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 139
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 140 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 179 IISGKRL 185
+++ + L
Sbjct: 198 MVTRRAL 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
++I K L+KS QG + E+ L+H ++I++ +E ++V EY N+
Sbjct: 45 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE--- 99
Query: 67 CYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
LFD I +R + ++ + I + Y R I+HRDLK N+LL E + KI
Sbjct: 100 --LFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 154
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLL 176
+DFGL+ I + + G+ Y PE +Y+ + DV+S GV+L
Sbjct: 155 ADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
++I K L+KS QG + E+ L+H ++I++ +E ++V EY N+
Sbjct: 44 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE--- 98
Query: 67 CYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
LFD I +R + ++ + I + Y R I+HRDLK N+LL E + KI
Sbjct: 99 --LFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 153
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLL 176
+DFGL+ I + + G+ Y PE +Y+ + DV+S GV+L
Sbjct: 154 ADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLSFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+I KKLS A+ ++ + E + L+H N++R+ + L+++ + L
Sbjct: 43 IINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-- 97
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP---K 124
D + R H I+ I + +L+ + + ++HR+LK N+LL +K K
Sbjct: 98 -FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVK 153
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
++DFGLA E + GT GY+ PE R+ Y D+++ GV+L ++ G
Sbjct: 154 LADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 39/278 (14%)
Query: 6 GEVIAVKKL-SKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSE----ERMLVYEYM 60
GE +AVK + A F E E+ T ++H N++ + I + L+ +Y
Sbjct: 60 GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQE-----YSRLTIIHRDLKASNI 115
N SL +D ++ LD K + + GL +L + I HRDLK+ NI
Sbjct: 118 ENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 116 LLGEDMKPKISDFGLARIFAKES----LKANTEQVVGTIGYIPPEYARQGVYSTK----- 166
L+ ++ I+D GLA F ++ + NT VGT Y+PPE + +
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--VGTKRYMPPEVLDESLNRNHFQSYI 231
Query: 167 -SDVFSFGVLLLQIISGKRLSMLCGINENLSILEH-------AYELWKGGKGMEFVDSFL 218
+D++SFG++L ++ R + GI E + H +YE + ++ +
Sbjct: 232 MADMYSFGLILWEV---ARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSF 288
Query: 219 DDRNSSCKLMRCL-EIALLCVQENPNDRPSMLEVSSML 255
+R SS + +R + ++ C NP R + L V L
Sbjct: 289 PNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
++I K L+KS QG + E+ L+H ++I++ +E ++V EY N+
Sbjct: 39 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE--- 93
Query: 67 CYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
LFD I +R + ++ + I + Y R I+HRDLK N+LL E + KI
Sbjct: 94 --LFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 148
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLL 176
+DFGL+ I + + G+ Y PE +Y+ + DV+S GV+L
Sbjct: 149 ADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
++I K L+KS QG + E+ L+H ++I++ +E ++V EY N+
Sbjct: 35 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE--- 89
Query: 67 CYLFDPI-RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
LFD I +R + ++ + I + Y R I+HRDLK N+LL E + KI
Sbjct: 90 --LFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKI 144
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLL 176
+DFGL+ I + + G+ Y PE +Y+ + DV+S GV+L
Sbjct: 145 ADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMP 61
G+ +AV+ + K+ ++ ++ EV + L H N++++ I++E+ + LV EY
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYAS 96
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 97 GGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAENLLLDADM 150
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQII 180
KI+DFG + F + ++ G+ Y PE + Y + DV+S GV+L ++
Sbjct: 151 NIKIADFGFSNEF---TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Query: 181 SG 182
SG
Sbjct: 208 SG 209
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 24/185 (12%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
++I KKLS A+ ++ + E + L+H N++R+ + LV++ + L
Sbjct: 61 AKIINTKKLS---ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP-- 123
D + R H I I + + ++ ++ I+HRDLK N+LL K
Sbjct: 118 ---FEDIVAREYYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAA 171
Query: 124 -KISDFGLARIFAKESLKANTEQ-----VVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
K++DFGLA ++ EQ GT GY+ PE R+ Y D+++ GV+L
Sbjct: 172 VKLADFGLA-------IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILY 224
Query: 178 QIISG 182
++ G
Sbjct: 225 ILLVG 229
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEYMP 61
G+ +AVK + K+ ++ ++ EV + L H N++++ I++E+ + LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYAS 96
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 97 GGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAENLLLDADM 150
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQII 180
KI+DFG + F + + G+ Y PE + Y + DV+S GV+L ++
Sbjct: 151 NIKIADFGFSNEF---TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
Query: 181 SG 182
SG
Sbjct: 208 SG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G+ +AVK + K+ ++ ++ EV + L H N++++ + LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 98 GEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAENLLLDADMN 151
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F + + G+ Y PE + Y + DV+S GV+L ++S
Sbjct: 152 IKIADFGFSNEF---TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 182 G 182
G
Sbjct: 209 G 209
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 95 LYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIP 154
L L L II+RDLK NILL E+ K++DFGL++ KA + GT+ Y+
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 195
Query: 155 PEYARQGVYSTKSDVFSFGVLLLQIISG 182
PE + ++ +D +SFGVL+ ++++G
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 95 LYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIP 154
L L L II+RDLK NILL E+ K++DFGL++ KA + GT+ Y+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 155 PEYARQGVYSTKSDVFSFGVLLLQIISG 182
PE + ++ +D +SFGVL+ ++++G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 95 LYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIP 154
L L L II+RDLK NILL E+ K++DFGL++ KA + GT+ Y+
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMA 194
Query: 155 PEYARQGVYSTKSDVFSFGVLLLQIISG 182
PE + ++ +D +SFGVL+ ++++G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G+ +AVK + K+ ++ ++ EV + L H N++++ + LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 98 GEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAENLLLDADMN 151
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F + + G Y PE + Y + DV+S GV+L ++S
Sbjct: 152 IKIADFGFSNEF---TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 182 G 182
G
Sbjct: 209 G 209
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++ +
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-H 84
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ L ++ I + ++ + + QGL + + ++HRDLK N+L+ +
Sbjct: 85 QDLKTFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA 140
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIIS 181
K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + ++++
Sbjct: 141 IKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
Query: 182 GKRL 185
+ L
Sbjct: 199 RRAL 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 97 LQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLA-RIFAKESLKANTEQVVGTIGYIPP 155
L++ R I++RDLK NILL + +ISD GLA + +++K VGT+GY+ P
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAP 354
Query: 156 EYARQGVYSTKSDVFSFGVLLLQIISGK 183
E + Y+ D ++ G LL ++I+G+
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +A+K + K+ + ++ EV + L H N++++ + L+ EY
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 96 GEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMN 149
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F ++ + G+ Y PE + Y + DV+S GV+L ++S
Sbjct: 150 IKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
Query: 182 G 182
G
Sbjct: 207 G 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 6 GEVIAVKKLSKSSAQGFE---EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVK L++ + + + + E+ +H ++I++ + +V EY+
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L Y+ R LD K+ + + I G+ Y R ++HRDLK N+LL M
Sbjct: 101 GELFDYICKNGR---LDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMN 154
Query: 123 PKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLLLQII 180
KI+DFGL+ + + E L+ + G+ Y PE +Y+ + D++S GV+L ++
Sbjct: 155 AKIADFGLSNMMSDGEFLRXS----CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
Query: 181 SG 182
G
Sbjct: 211 CG 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +A+K + K+ + ++ EV + L H N++++ + L+ EY
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 99 GEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMN 152
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F ++ + G Y PE + Y + DV+S GV+L ++S
Sbjct: 153 IKIADFGFSNEF---TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
Query: 182 G 182
G
Sbjct: 210 G 210
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEY--- 59
GE +A+KKLS+ S + E++L +QH N+I +L + Y++
Sbjct: 48 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
MP D I L +K +++ + +GL Y+ ++HRDLK N+ + E
Sbjct: 108 MPFMQTD---LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNE 161
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQ 178
D + KI DFGLAR A V T Y PE + Y+ D++S G ++ +
Sbjct: 162 DCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 216
Query: 179 IISGKRL 185
+++GK L
Sbjct: 217 MLTGKTL 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 8 VIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
+I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 239
Query: 65 LDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG--- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 240 L----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 290
Query: 119 EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGVL 175
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV+
Sbjct: 291 EDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 176 LLQIISG 182
L +SG
Sbjct: 348 LFICLSG 354
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 97 LQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLA-RIFAKESLKANTEQVVGTIGYIPP 155
L++ R I++RDLK NILL + +ISD GLA + +++K VGT+GY+ P
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAP 354
Query: 156 EYARQGVYSTKSDVFSFGVLLLQIISGK 183
E + Y+ D ++ G LL ++I+G+
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVK + K+ + ++ EV + L H N++++ + LV EY
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYL-QEYSRLTIIHRDLKASNILLGEDM 121
+ YL R + K+ I + Y Q+Y I+HRDLKA N+LL DM
Sbjct: 99 GEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKY----IVHRDLKAENLLLDGDM 151
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQII 180
KI+DFG + F ++ + G+ Y PE + Y + DV+S GV+L ++
Sbjct: 152 NIKIADFGFSNEF---TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
Query: 181 SG 182
SG
Sbjct: 209 SG 210
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G+ +AV+ + K+ ++ ++ EV + L H N++++ + LV EY
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL R + K+ I + Y + I+HRDLKA N+LL DM
Sbjct: 98 GEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQK---FIVHRDLKAENLLLDADMN 151
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F + + G+ Y PE + Y + DV+S GV+L ++S
Sbjct: 152 IKIADFGFSNEF---TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 182 G 182
G
Sbjct: 209 G 209
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 8 VIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
+I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 225
Query: 65 LDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG--- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 226 L----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE 276
Query: 119 EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGVL 175
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV+
Sbjct: 277 EDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 176 LLQIISG 182
L +SG
Sbjct: 334 LFICLSG 340
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP- 61
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 87
Query: 62 --NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 88 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPENLLINT 139
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 140 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 179 IISGKRL 185
+++ + L
Sbjct: 198 MVTRRAL 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP- 61
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 62 --NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 90 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPENLLINT 141
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 142 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 179 IISGKRL 185
+++ + L
Sbjct: 200 MVTRRAL 206
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
D + + L K + + QGL + + ++HRDLK N+L+ +
Sbjct: 87 DLKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA 141
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIIS 181
K++DFGLAR F ++ +VV T+ Y PE YST D++S G + ++++
Sbjct: 142 IKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
Query: 182 GKRL 185
+ L
Sbjct: 200 RRAL 203
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 48/193 (24%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP---NKSLDCYLFDP------- 72
E+ + EV AKL HVN++ G C D ++Y P + SL+ +DP
Sbjct: 50 EKAEREVKALAKLDHVNIVHYNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSS 102
Query: 73 --------------IRRLILDW--KKR---------VHIIEGITQGLLYLQEYSRLTIIH 107
+ + W K+R + + E IT+G+ Y+ +IH
Sbjct: 103 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LIH 159
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS 167
RDLK SNI L + + KI DFGL + + ++ GT+ Y+ PE Y +
Sbjct: 160 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK---GTLRYMSPEQISSQDYGKEV 216
Query: 168 DVFSFGVLLLQII 180
D+++ G++L +++
Sbjct: 217 DLYALGLILAELL 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
A K + S + E++ E+ + A H N++++L ++ E+ ++D +
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 98
Query: 70 FDPIRRLILDWKKRVHII-EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
+ R L + ++ ++ + L YL + IIHRDLKA NIL D K++DF
Sbjct: 99 LELERPLT---ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 152
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEY-----ARQGVYSTKSDVFSFGVLLLQI 179
G++ + ++ + +GT ++ PE ++ Y K+DV+S G+ L+++
Sbjct: 153 GVSAKNTRTXIQ-RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 95 LYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIP 154
L L L II+RDLK NILL E+ K++DFGL++ KA + GT+ Y+
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMA 198
Query: 155 PEYARQGVYSTKSDVFSFGVLLLQIISG 182
PE + +S +D +S+GVL+ ++++G
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 88 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 139
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 140 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 179 IISGKRL 185
+++ + L
Sbjct: 198 MVTRRAL 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+ K+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+ K+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 26 TGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 86 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 137
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ T +VV T+ Y PE YST D++S G + +
Sbjct: 138 EGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 179 IISGKRL 185
+++ + L
Sbjct: 196 MVTRRAL 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 88 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 139
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 140 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 179 IISGKRL 185
+++ + L
Sbjct: 198 MVTRRAL 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 89 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 140
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 141 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 199 MVT--RRALFPGDSE 211
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 31 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 91 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 142
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 143 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 200
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 201 MVT--RRALFPGDSE 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 28 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 88 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPENLLINT 139
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 140 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 197
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 198 MVT--RRALFPGDSE 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 89 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPENLLINT 140
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 141 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 199 MVT--RRALFPGDSE 211
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 90 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 141
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 142 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 200 MVT--RRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 89 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 140
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 141 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 199 MVT--RRALFPGDSE 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK K + E+F +E ++ L H ++++++G I+ E ++ E P L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGH 97
Query: 68 YL---FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
YL + ++ L L V I + + YL+ + +HRD+ NIL+ K
Sbjct: 98 YLERNKNSLKVLTL-----VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVK 149
Query: 125 ISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-G 182
+ DFGL+R E KA+ ++ I ++ PE ++T SDV+ F V + +I+S G
Sbjct: 150 LGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 207
Query: 183 KRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL--CVQE 240
K+ + + +LE KG DR L + L+ C
Sbjct: 208 KQPFFWLENKDVIGVLE------KG------------DRLPKPDLCPPVLYTLMTRCWDY 249
Query: 241 NPNDRPSMLEVSSMLKN 257
+P+DRP E+ L +
Sbjct: 250 DPSDRPRFTELVCSLSD 266
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
++I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 40 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 98
Query: 64 SLDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 99 EL----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 149
Query: 119 -EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGV 174
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV
Sbjct: 150 EEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 206
Query: 175 LLLQIISG 182
+L +SG
Sbjct: 207 ILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
++I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 64 SLDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 100 EL----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 119 -EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGV 174
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV
Sbjct: 151 EEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
Query: 175 LLLQIISG 182
+L +SG
Sbjct: 208 ILFICLSG 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 86 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 137
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 138 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 179 IISGKRL 185
+++ + L
Sbjct: 196 MVTRRAL 202
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
++I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 64 SLDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 100 EL----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 119 -EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGV 174
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV
Sbjct: 151 EEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
Query: 175 LLLQIISG 182
+L +SG
Sbjct: 208 ILFICLSG 215
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK K + E+F +E ++ L H ++++++G I+ E ++ E P L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGH 101
Query: 68 YL---FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
YL + ++ L L V I + + YL+ + +HRD+ NIL+ K
Sbjct: 102 YLERNKNSLKVLTL-----VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVK 153
Query: 125 ISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-G 182
+ DFGL+R E KA+ ++ I ++ PE ++T SDV+ F V + +I+S G
Sbjct: 154 LGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 211
Query: 183 KRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL--CVQE 240
K+ + + +LE KG DR L + L+ C
Sbjct: 212 KQPFFWLENKDVIGVLE------KG------------DRLPKPDLCPPVLYTLMTRCWDY 253
Query: 241 NPNDRPSMLEVSSMLKN 257
+P+DRP E+ L +
Sbjct: 254 DPSDRPRFTELVCSLSD 270
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 90 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 141
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 142 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 200 MVT--RRALFPGDSE 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 27 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 87 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 138
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 139 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 179 IISGKRL 185
+++ + L
Sbjct: 197 MVTRRAL 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 26 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 86 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 137
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 138 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 179 IISGKRL 185
+++ + L
Sbjct: 196 MVTRRAL 202
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
++I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 41 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 99
Query: 64 SLDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 100 EL----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 119 -EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGV 174
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV
Sbjct: 151 EEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 207
Query: 175 LLLQIISG 182
+L +SG
Sbjct: 208 ILFICLSG 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 29 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 88
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
D + + L K + + QGL + + ++HRDLK N+L+ +
Sbjct: 89 DLKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA 143
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIIS 181
K++DFGLAR F ++ +VV T+ Y PE YST D++S G + ++++
Sbjct: 144 IKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
Query: 182 GKRL 185
+ L
Sbjct: 202 RRAL 205
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
++I+ +K + SA+ + N E+ + KL H +I++ F D+E+ +V E M
Sbjct: 47 KIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG 105
Query: 64 SLDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-- 118
L FD + +RL K Q LL +Q IIHRDLK N+LL
Sbjct: 106 EL----FDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 156
Query: 119 -EDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGV 174
ED KI+DFG ++I + SL + GT Y+ PE Y+ D +S GV
Sbjct: 157 EEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 213
Query: 175 LLLQIISG 182
+L +SG
Sbjct: 214 ILFICLSG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 45/253 (17%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+ +K L K+ E F + +KL H +L+ G C+ +E +LV E++ SLD Y
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--GEDMKP--- 123
L + + WK + + + + + +L+E T+IH ++ A NILL ED K
Sbjct: 103 LKKNKNCINILWK--LEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157
Query: 124 ---KISDFGLA-RIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQ 178
K+SD G++ + K+ L+ I ++PPE + +D +SFG L +
Sbjct: 158 PFIKLSDPGISITVLPKDILQER-------IPWVPPECIENPKNLNLATDKWSFGTTLWE 210
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL-- 236
I SG ++ LS L+ +L F +DR+ + E+A L
Sbjct: 211 ICSGG--------DKPLSALDSQRKL-----------QFYEDRH-QLPAPKAAELANLIN 250
Query: 237 -CVQENPNDRPSM 248
C+ P+ RPS
Sbjct: 251 NCMDYEPDHRPSF 263
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
D + + L K + + QGL + + ++HRDLK N+L+ +
Sbjct: 90 DLKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA 144
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIIS 181
K++DFGLAR F ++ +VV T+ Y PE YST D++S G + ++++
Sbjct: 145 IKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 182 GKRL 185
+ L
Sbjct: 203 RRAL 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 17/187 (9%)
Query: 5 CGEVIAVKKLSKS-SAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEY--- 59
GE +A+KKLS+ ++ F + E++L +QH N+I +L + Y++
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
MP D I + +K +++ + +GL Y+ ++HRDLK N+ + E
Sbjct: 126 MPFMQTD---LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNE 179
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQ 178
D + KI DFGLAR A V T Y PE + Y+ D++S G ++ +
Sbjct: 180 DCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAE 234
Query: 179 IISGKRL 185
+++GK L
Sbjct: 235 MLTGKTL 241
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 9 IAVKKLSKS-SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+AVK K + E+F +E ++ L H ++++++G I+ E ++ E P L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGH 113
Query: 68 YL---FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
YL + ++ L L V I + + YL+ + +HRD+ NIL+ K
Sbjct: 114 YLERNKNSLKVLTL-----VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVK 165
Query: 125 ISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS-G 182
+ DFGL+R E KA+ ++ I ++ PE ++T SDV+ F V + +I+S G
Sbjct: 166 LGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 223
Query: 183 KRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL--CVQE 240
K+ + + +LE KG DR L + L+ C
Sbjct: 224 KQPFFWLENKDVIGVLE------KG------------DRLPKPDLCPPVLYTLMTRCWDY 265
Query: 241 NPNDRPSMLEVSSMLKN 257
+P+DRP E+ L +
Sbjct: 266 DPSDRPRFTELVCSLSD 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
E+M SLD L + +R+ + +V I + +GL YL+E + I+HRD+K SNIL+
Sbjct: 94 EHMDGGSLDQVLKE-AKRIPEEILGKVSI--AVLRGLAYLRE--KHQIMHRDVKPSNILV 148
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+ K+ DFG++ + + + VGT Y+ PE + YS +SD++S G+ L+
Sbjct: 149 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 178 QIISGK 183
++ G+
Sbjct: 205 ELAVGR 210
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G + A K + S + E++ E+ + A H ++++LG + ++ E+ P +
Sbjct: 35 TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 94
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
+D + + R L + ++ ++ Q L L IIHRDLKA N+L+ + +
Sbjct: 95 VDAIMLELDRGLT---EPQIQVV--CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIR 149
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYA-----RQGVYSTKSDVFSFGVLLLQI 179
++DFG++ K K ++ +GT ++ PE + Y K+D++S G+ L+++
Sbjct: 150 LADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 10/184 (5%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++ +
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ L ++ I + ++ + + QGL + + ++HRDLK N+L+ +
Sbjct: 89 QDLKTFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA 144
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIIS 181
K++DFGLAR F ++ +VV T+ Y PE YST D++S G + ++++
Sbjct: 145 IKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
Query: 182 GKRL 185
+ L
Sbjct: 203 RRAL 206
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 5 CGEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
GEV+A+KK+ + +G E+ L +L H N++++L + LV+E++
Sbjct: 30 TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ 89
Query: 63 ---KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
K +D I ++ + ++ + + QGL + + ++HRDLK N+L+
Sbjct: 90 DLKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSHR---VLHRDLKPQNLLINT 141
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKSDVFSFGVLLLQ 178
+ K++DFGLAR F ++ +VV T+ Y PE YST D++S G + +
Sbjct: 142 EGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 179 IISGKRLSMLCGINE 193
+++ R ++ G +E
Sbjct: 200 MVT--RRALFPGDSE 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G + A K + S + E++ E+ + A H ++++LG + ++ E+ P +
Sbjct: 43 TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
+D + + R L + ++ ++ Q L L IIHRDLKA N+L+ + +
Sbjct: 103 VDAIMLELDRGLT---EPQIQVV--CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIR 157
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYA-----RQGVYSTKSDVFSFGVLLLQI 179
++DFG++ K K ++ +GT ++ PE + Y K+D++S G+ L+++
Sbjct: 158 LADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL--KANTEQVVGTIG 151
+L LQ I++RDLK NILL +D KI+DFG+ KE++ A T + GT
Sbjct: 129 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM----CKENMLGDAKTNEFCGTPD 184
Query: 152 YIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
YI PE Y+ D +SFGVLL +++ G+
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+++ V K + S E+ K E + L+H +++ +L +V+E+M L
Sbjct: 57 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 115
Query: 67 CYLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG--ED 120
F+ ++R + H + I + L Y + + IIHRD+K +LL E+
Sbjct: 116 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN 170
Query: 121 MKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
P K+ FG+A + L A VGT ++ PE ++ Y DV+ GV+L +
Sbjct: 171 SAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 228
Query: 180 ISG 182
+SG
Sbjct: 229 LSG 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 26 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPI-RRLILDWKKRV 84
+ E+ + +L H N+I++ E LV E + L FD I + +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAA 151
Query: 85 HIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG---EDMKPKISDFGLARIFAKESLKA 141
++ I + + YL E I+HRDLK N+L D KI+DFGL++I + L
Sbjct: 152 DAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL-- 206
Query: 142 NTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+ V GT GY PE R Y + D++S G++ ++ G
Sbjct: 207 -MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+++ V K + S E+ K E + L+H +++ +L +V+E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 113
Query: 67 CYLFDPIRR----LILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG--ED 120
F+ ++R + H + I + L Y + + IIHRD+K +LL E+
Sbjct: 114 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN 168
Query: 121 MKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
P K+ FG+A + L A VGT ++ PE ++ Y DV+ GV+L +
Sbjct: 169 SAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
Query: 180 ISG 182
+SG
Sbjct: 227 LSG 229
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
A K + S + E++ E+ + A H N++++L ++ E+ ++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 70 FDPIRRLILDWKKRVHII-EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
+ R L + ++ ++ + L YL + IIHRDLKA NIL D K++DF
Sbjct: 126 LELERPLT---ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 179
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEY-----ARQGVYSTKSDVFSFGVLLLQI 179
G++ + + ++ +GT ++ PE ++ Y K+DV+S G+ L+++
Sbjct: 180 GVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 45/253 (17%)
Query: 9 IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCY 68
+ +K L K+ E F + +KL H +L+ G C +E +LV E++ SLD Y
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 69 LFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL--GEDMKP--- 123
L + + WK + + + + + +L+E T+IH ++ A NILL ED K
Sbjct: 103 LKKNKNCINILWK--LEVAKQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157
Query: 124 ---KISDFGLA-RIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQ 178
K+SD G++ + K+ L+ I ++PPE + +D +SFG L +
Sbjct: 158 PFIKLSDPGISITVLPKDILQER-------IPWVPPECIENPKNLNLATDKWSFGTTLWE 210
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEIALL-- 236
I SG ++ LS L+ +L F +DR+ + E+A L
Sbjct: 211 ICSGG--------DKPLSALDSQRKL-----------QFYEDRH-QLPAPKAAELANLIN 250
Query: 237 -CVQENPNDRPSM 248
C+ P+ RPS
Sbjct: 251 NCMDYEPDHRPSF 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
A K + S + E++ E+ + A H N++++L ++ E+ ++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 70 FDPIRRLILDWKKRVHII-EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
+ R L + ++ ++ + L YL + IIHRDLKA NIL D K++DF
Sbjct: 126 LELERPLT---ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 179
Query: 129 GLARIFAKESLKANTEQVVGTIGYIPPEY-----ARQGVYSTKSDVFSFGVLLLQI 179
G++ + + ++ +GT ++ PE ++ Y K+DV+S G+ L+++
Sbjct: 180 GVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ E + VGT
Sbjct: 116 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM----ANEFVGT 169
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 23/189 (12%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVM-LTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G VIAVK++ +S + EE K +M L L+ + +++ G I + + + E M
Sbjct: 50 GHVIAVKQMRRSGNK--EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMG 107
Query: 62 N--KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+ L + PI IL + I + L YL+E + +IHRD+K SNILL E
Sbjct: 108 TCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDE 160
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-----ARQGVYSTKSDVFSFGV 174
+ K+ DFG++ + K ++ G Y+ PE + Y ++DV+S G+
Sbjct: 161 RGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217
Query: 175 LLLQIISGK 183
L+++ +G+
Sbjct: 218 SLVELATGQ 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 16/177 (9%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
A K + S + E++ E+ + A H N++++L ++ E+ ++D +
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM 125
Query: 70 FDPIRRLILDWKKRVHII-EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDF 128
+ R L + ++ ++ + L YL + IIHRDLKA NIL D K++DF
Sbjct: 126 LELERPLT---ESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADF 179
Query: 129 GLARIFAKESLK-ANTEQVVGTIGYIPPEY-----ARQGVYSTKSDVFSFGVLLLQI 179
G++ AK + + +GT ++ PE ++ Y K+DV+S G+ L+++
Sbjct: 180 GVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 89 GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVG 148
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VG
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 149 TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 89 GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVG 148
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VG
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 149 TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VGT
Sbjct: 132 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 185
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL--KANTEQVVGTIG 151
+L LQ I++RDLK NILL +D KI+DFG+ KE++ A T GT
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM----CKENMLGDAKTNXFCGTPD 183
Query: 152 YIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
YI PE Y+ D +SFGVLL +++ G+
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
A KK+ K + + FK E+ + L H N+IR+ D+ + LV E L +
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 97
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GEDMKPKIS 126
+ + + I++ + + Y +L + HRDLK N L D K+
Sbjct: 98 ---VHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLI 151
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA F + VGT Y+ P+ +G+Y + D +S GV++ ++ G
Sbjct: 152 DFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
A KK+ K + + FK E+ + L H N+IR+ D+ + LV E L +
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 114
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL---GEDMKPKIS 126
+ + + I++ + + Y +L + HRDLK N L D K+
Sbjct: 115 ---VHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLI 168
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA F + VGT Y+ P+ +G+Y + D +S GV++ ++ G
Sbjct: 169 DFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 89 GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVG 148
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VG
Sbjct: 139 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 192
Query: 149 TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 89 GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVG 148
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VG
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 149 TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 5 CGEVIAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G+ +AVK + K+ ++ ++ EV + L H N++++ + LV EY
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ YL R K Q + +Q + I+HRDLKA N+LL D
Sbjct: 98 GEVFDYLVAHGR------XKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXN 151
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIIS 181
KI+DFG + F + + G Y PE + Y + DV+S GV+L ++S
Sbjct: 152 IKIADFGFSNEF---TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 182 G 182
G
Sbjct: 209 G 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Query: 5 CGEVIAVKKLSKSS----AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERM-LVYEY 59
G++ A+K L K++ A+ E + E + ++ + L + +E ++ L+ +Y
Sbjct: 81 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDY 140
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+ L +L R + + ++++ E + L L+ +L II+RD+K NILL
Sbjct: 141 INGGELFTHLSQ--RERFTEHEVQIYVGEIV----LALEHLHKLGIIYRDIKLENILLDS 194
Query: 120 DMKPKISDFGLARIF-AKESLKANTEQVVGTIGYIPPEYARQG--VYSTKSDVFSFGVLL 176
+ ++DFGL++ F A E+ +A GTI Y+ P+ R G + D +S GVL+
Sbjct: 195 NGHVVLTDFGLSKEFVADETERAY--DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252
Query: 177 LQIISG 182
++++G
Sbjct: 253 YELLTG 258
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 47 CIDSEERML-VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTI 105
C +E R+ V EY+ L ++ +R + + R + E I+ L YL E I
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG---I 142
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVY 163
I+RDLK N+LL + K++D+G+ KE L+ T GT YI PE R Y
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMC----KEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 164 STKSDVFSFGVLLLQIISGKRLSMLCGINEN 194
D ++ GVL+ ++++G+ + G ++N
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 89 GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVG 148
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VG
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 165
Query: 149 TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VGT
Sbjct: 113 VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 6 GEVIAVKKLSKSS-AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
GE++A+K + K++ K E+ L+H ++ ++ + + +V EY P
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L Y+ R + + + RV + I + Y+ HRDLK N+L E K K
Sbjct: 95 LFDYIISQDR--LSEEETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLK 148
Query: 125 ISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQIISG 182
+ DFGL K + + + G++ Y PE + Y +++DV+S G+LL ++ G
Sbjct: 149 LIDFGLCAK-PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 47 CIDSEERML-VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTI 105
C +E R+ V EY+ L ++ +R + + R + E I+ L YL E I
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG---I 174
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVY 163
I+RDLK N+LL + K++D+G+ KE L+ T GT YI PE R Y
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMC----KEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 164 STKSDVFSFGVLLLQIISGKRLSMLCGINEN 194
D ++ GVL+ ++++G+ + G ++N
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 89 GITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVG 148
+ +GL YL+E + I+HRD+K SNIL+ + K+ DFG++ + + + VG
Sbjct: 174 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 227
Query: 149 TIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
T Y+ PE + YS +SD++S G+ L+++ G+
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 6 GEVIAVKKLSKS---SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G A+K L K + E +E ++ + + H +IR+ G D+++ ++ +Y+
Sbjct: 31 GRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L L R + + + E + L YL II+RDLK NILL ++
Sbjct: 91 GELFSLLRKSQR--FPNPVAKFYAAE-VCLALEYLHSKD---IIYRDLKPENILLDKNGH 144
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI+DFG A+ + T + GT YI PE Y+ D +SFG+L+ ++++G
Sbjct: 145 IKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL--KANTEQVV 147
I GL +LQ II+RDLK N++L + KI+DFG+ KE++ T+
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM----CKENIWDGVTTKXFC 182
Query: 148 GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN---LSILEH 200
GT YI PE Y D ++FGVLL ++++G+ + G +E+ SI+EH
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELFQSIMEH 236
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL--KANTEQVV 147
I GL +LQ II+RDLK N++L + KI+DFG+ KE++ T+
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM----CKENIWDGVTTKXFC 503
Query: 148 GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN---LSILEH 200
GT YI PE Y D ++FGVLL ++++G+ + G +E+ SI+EH
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELFQSIMEH 557
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 47 CIDSEERML-VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTI 105
C +E R+ V EY+ L ++ +R + + R + E I+ L YL E I
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG---I 127
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVY 163
I+RDLK N+LL + K++D+G+ KE L+ T GT YI PE R Y
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMC----KEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 164 STKSDVFSFGVLLLQIISGKRLSMLCGINEN 194
D ++ GVL+ ++++G+ + G ++N
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 47 CIDSEERML-VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTI 105
C +E R+ V EY+ L ++ +R + + R + E I+ L YL E I
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG---I 131
Query: 106 IHRDLKASNILLGEDMKPKISDFGLARIFAKESLKA--NTEQVVGTIGYIPPEYARQGVY 163
I+RDLK N+LL + K++D+G+ KE L+ T GT YI PE R Y
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMC----KEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 164 STKSDVFSFGVLLLQIISGKRLSMLCGINEN 194
D ++ GVL+ ++++G+ + G ++N
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 6 GEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
GE A+KK+ + +G E+ + +L+H N++++ + +LV+E++
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEG----ITQGLLYLQEYSRLT------IIHRDLKAS 113
D KK + + EG +T LQ + + ++HRDLK
Sbjct: 85 ---------------DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-ARQGVYSTKSDVFSF 172
N+L+ + + KI+DFGLAR F ++ T +VV T+ Y P+ YST D++S
Sbjct: 130 NLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSV 187
Query: 173 GVLLLQIISGKRLSMLCGINE 193
G + ++++G L G++E
Sbjct: 188 GCIFAEMVNGTPL--FPGVSE 206
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 6 GEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
GE A+KK+ + +G E+ + +L+H N++++ + +LV+E++
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEG----ITQGLLYLQEYSRLT------IIHRDLKAS 113
D KK + + EG +T LQ + + ++HRDLK
Sbjct: 85 ---------------DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-ARQGVYSTKSDVFSF 172
N+L+ + + KI+DFGLAR F ++ T +VV T+ Y P+ YST D++S
Sbjct: 130 NLLINREGELKIADFGLARAFGI-PVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSV 187
Query: 173 GVLLLQIISGKRLSMLCGINE 193
G + ++++G L G++E
Sbjct: 188 GCIFAEMVNGAPL--FPGVSE 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 55/267 (20%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLV------------- 56
A+KK+ + + + +EVML A L H ++R + E R V
Sbjct: 35 AIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL--ERRNFVKPMTAVKKKSTLF 91
Query: 57 --YEYMPNKSLDCYLFDPIRRLILDWKKRVH--IIEGITQGLLYLQEYSRLTIIHRDLKA 112
EY N++L +D I L+ ++ + + I + L Y+ IIHRDLK
Sbjct: 92 IQMEYCENRTL----YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKP 144
Query: 113 SNILLGEDMKPKISDFGLARIFAK--ESLKANTEQV----------VGTIGYIPPEYAR- 159
NI + E KI DFGLA+ + + LK +++ + +GT Y+ E
Sbjct: 145 MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
Query: 160 QGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLD 219
G Y+ K D++S G++ ++I M E ++IL+ + +EF F D
Sbjct: 205 TGHYNEKIDMYSLGIIFFEMIYPFSTGM-----ERVNILKKLRSV-----SIEFPPDFDD 254
Query: 220 DRNSSCKLMRCLEIALLCVQENPNDRP 246
++ K +I L + +PN RP
Sbjct: 255 NKMKVEK-----KIIRLLIDHDPNKRP 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 25/265 (9%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G A K + E + E+ + L+H L+ + D E +++YE+M
Sbjct: 181 TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP- 123
L + D ++ D + V + + +GL ++ E + +H DLK NI+
Sbjct: 241 LFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNE 295
Query: 124 -KISDFGL-ARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K+ DFGL A + K+S+K T GT + PE A +D++S GVL ++S
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
Query: 182 GKRLSMLCGINENLSILEHAYELWK---------GGKGMEFVDS-FLDDRNSSCKLMRCL 231
G LS G N++ ++ W G +F+ L D N+ + + L
Sbjct: 352 G--LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 409
Query: 232 EIALLCVQENPNDRPSMLEVSSMLK 256
E L P R S + S K
Sbjct: 410 EHPWLTPGNAPG-RDSQIPSSRYTK 433
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 6 GEVIAVKKLSKSSAQGFEE--FKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
G+++A+KK +S + E+ + +L+H NL+ +L LV+EY +
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGIT-QGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L + D +R + + H+++ IT Q L + + IHRD+K NIL+ +
Sbjct: 88 VL--HELDRYQRGVPE-----HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSV 140
Query: 123 PKISDFGLARIFAKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSFGVLLLQIIS 181
K+ DFG AR+ S + E V T Y PE Y DV++ G + +++S
Sbjct: 141 IKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
Query: 182 G 182
G
Sbjct: 199 G 199
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 6 GEVIAVKK-LSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERM--------L 55
G+ +A+KK L ++ +GF E+ + L+H N++ ++ C L
Sbjct: 42 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101
Query: 56 VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
V+++ + L L + + + L KRV ++ + GL Y+ R I+HRD+KA+N+
Sbjct: 102 VFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH---RNKILHRDMKAANV 155
Query: 116 LLGEDMKPKISDFGLARIF--AKESLKANTEQVVGTIGYIPPE 156
L+ D K++DFGLAR F AK S V T+ Y PPE
Sbjct: 156 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 25/265 (9%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
G A K + E + E+ + L+H L+ + D E +++YE+M
Sbjct: 75 TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 134
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP- 123
L + D ++ D + V + + +GL ++ E + +H DLK NI+
Sbjct: 135 LFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNE 189
Query: 124 -KISDFGL-ARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K+ DFGL A + K+S+K T GT + PE A +D++S GVL ++S
Sbjct: 190 LKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 245
Query: 182 GKRLSMLCGINENLSILEHAYELWK---------GGKGMEFVDS-FLDDRNSSCKLMRCL 231
G LS G N++ ++ W G +F+ L D N+ + + L
Sbjct: 246 G--LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 303
Query: 232 EIALLCVQENPNDRPSMLEVSSMLK 256
E L P R S + S K
Sbjct: 304 EHPWLTPGNAPG-RDSQIPSSRYTK 327
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 6 GEVIAVKK-LSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERM--------L 55
G+ +A+KK L ++ +GF E+ + L+H N++ ++ C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYL 102
Query: 56 VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
V+++ + L L + + + L KRV ++ + GL Y+ R I+HRD+KA+N+
Sbjct: 103 VFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH---RNKILHRDMKAANV 156
Query: 116 LLGEDMKPKISDFGLARIF--AKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSF 172
L+ D K++DFGLAR F AK S V T+ Y PPE + Y D++
Sbjct: 157 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216
Query: 173 GVLLLQIIS 181
G ++ ++ +
Sbjct: 217 GCIMAEMWT 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 6 GEVIAVKK-LSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERM--------L 55
G+ +A+KK L ++ +GF E+ + L+H N++ ++ C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 56 VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
V+++ L L + + + L KRV ++ + GL Y+ R I+HRD+KA+N+
Sbjct: 103 VFDFC-EHDLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH---RNKILHRDMKAANV 156
Query: 116 LLGEDMKPKISDFGLARIF--AKESLKANTEQVVGTIGYIPPE 156
L+ D K++DFGLAR F AK S V T+ Y PPE
Sbjct: 157 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 37 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 95
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 96 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 144
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VGT+ Y+PPE + S ++
Sbjct: 145 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 203
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 204 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 255
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 256 --VLKC------CLKRDPKQRISIPEL 274
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 6 GEVIAVKK-LSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERM--------L 55
G+ +A+KK L ++ +GF E+ + L+H N++ ++ C L
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 56 VYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNI 115
V+++ + L L + + + L KRV ++ + GL Y+ R I+HRD+KA+N+
Sbjct: 103 VFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH---RNKILHRDMKAANV 156
Query: 116 LLGEDMKPKISDFGLARIF--AKESLKANTEQVVGTIGYIPPE-YARQGVYSTKSDVFSF 172
L+ D K++DFGLAR F AK S V T+ Y PPE + Y D++
Sbjct: 157 LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGA 216
Query: 173 GVLLLQIIS 181
G ++ ++ +
Sbjct: 217 GCIMAEMWT 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 53 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 112 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 160
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VGT+ Y+PPE + S ++
Sbjct: 161 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 271
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 272 --VLKC------CLKRDPKQRISIPEL 290
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 33 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 91
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 92 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 140
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VGT+ Y+PPE + S ++
Sbjct: 141 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 199
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 200 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 251
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 252 --VLKC------CLKRDPKQRISIPEL 270
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 42/243 (17%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCID----SEERMLVYEYMP 61
G A+K++ Q EE + E + H N++R++ +C+ E L+ +
Sbjct: 54 GHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113
Query: 62 NKSLDCYLFDPIRRL-----ILDWKKRVHIIEGITQGL--LYLQEYSRLTIIHRDLKASN 114
+L ++ I RL L + + ++ GI +GL ++ + Y+ HRDLK +N
Sbjct: 114 RGTL----WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA-----HRDLKPTN 164
Query: 115 ILLGEDMKPKISDFG---LARIFAKESLKANTEQVVG----TIGYIPPE-YARQG--VYS 164
ILLG++ +P + D G A I + S +A T Q TI Y PE ++ Q V
Sbjct: 165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID 224
Query: 165 TKSDVFSFGVLLLQIISG---------KRLSMLCGINENLSILE---HAYELWKGGKGME 212
++DV+S G +L ++ G K S+ + LSI + H+ LW+ M
Sbjct: 225 ERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMM 284
Query: 213 FVD 215
VD
Sbjct: 285 TVD 287
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 11 VKKLSKSSAQ-GFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
+K ++K +Q E+ + E+ + L H N+I++ D +V E C
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME-------TCEG 104
Query: 70 FDPIRRLILDWKKRVHIIEG-----ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP- 123
+ + R++ + + EG + Q + L + ++H+DLK NIL +D P
Sbjct: 105 GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILF-QDTSPH 163
Query: 124 ---KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
KI DFGLA +F + N GT Y+ PE ++ V + K D++S GV++ ++
Sbjct: 164 SPIKIIDFGLAELFKSDEHSTN---AAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLL 219
Query: 181 SG 182
+G
Sbjct: 220 TG 221
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 31/192 (16%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN---EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
++ A+K ++K E +N E+ + L+H L+ + D E+ +V + +
Sbjct: 41 KMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGG 100
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQ--------GLLYLQEYSRLTIIHRDLKASNI 115
L +L ++ VH E + L YLQ IIHRD+K NI
Sbjct: 101 DLRYHL-----------QQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNI 146
Query: 116 LLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY--ARQGV-YSTKSDVFSF 172
LL E I+DF +A + +E+ + GT Y+ PE +R+G YS D +S
Sbjct: 147 LLDEHGHVHITDFNIAAMLPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSL 203
Query: 173 GVLLLQIISGKR 184
GV +++ G+R
Sbjct: 204 GVTAYELLRGRR 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 46/258 (17%)
Query: 6 GEV-IAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
GEV I + + + + + FK EVM + +H N++ +G C+ ++ ++
Sbjct: 56 GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115
Query: 65 LDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK 124
L + D +++LD K I + I +G+ YL I+H+DLK+ N+ ++ K
Sbjct: 116 LYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFY-DNGKVV 169
Query: 125 ISDFGLARIFAKESLKANTEQVV---GTIGYIPPEYARQ---------GVYSTKSDVFSF 172
I+DFGL I +++ G + ++ PE RQ +S SDVF+
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 173 GVLLLQIISGKR-----------LSMLCGINENLSILEHAYELWKGGKGMEFVDSFL--- 218
G + ++ + + M G+ NLS + G G E D L
Sbjct: 230 GTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI---------GMGKEISDILLFCW 280
Query: 219 ----DDRNSSCKLMRCLE 232
++R + KLM LE
Sbjct: 281 AFEQEERPTFTKLMDMLE 298
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 34 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 93 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 141
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VGT+ Y+PPE + S ++
Sbjct: 142 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 200
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 201 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 252
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 253 --VLKC------CLKRDPKQRISIPEL 271
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 81 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 140 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 188
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VGT+ Y+PPE + S ++
Sbjct: 189 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 299
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 300 --VLKC------CLKRDPKQRISIPEL 318
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 23/174 (13%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLG----FCIDSEER------------MLVYEYMPNKSLD 66
E+ + EV AKL HVN++ G F D E + E+ +L+
Sbjct: 49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE 108
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
++ + R LD + + E IT+G+ Y+ +I+RDLK SNI L + + KI
Sbjct: 109 QWI-EKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIG 164
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL + + ++ GT+ Y+ PE Y + D+++ G++L +++
Sbjct: 165 DFGLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 33/201 (16%)
Query: 6 GEVIAVKKLS-KSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNK 63
GE A+KK+ + +G E+ + +L+H N++++ + +LV+E++
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEG----ITQGLLYLQEYSRLT------IIHRDLKAS 113
D KK + + EG +T LQ + + ++HRDLK
Sbjct: 85 ---------------DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 114 NILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-ARQGVYSTKSDVFSF 172
N+L+ + + KI+DFGLAR F ++ T ++V T+ Y P+ YST D++S
Sbjct: 130 NLLINREGELKIADFGLARAFGI-PVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSV 187
Query: 173 GVLLLQIISGKRLSMLCGINE 193
G + ++++G L G++E
Sbjct: 188 GCIFAEMVNGTPL--FPGVSE 206
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 3 LPCGEVIAVKKLS--KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
+P G+ A K ++ K SA+ ++ + E + L+H N++R+ + LV++ +
Sbjct: 26 IPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
L D + R H I+ I + + + I+HRDLK N+LL
Sbjct: 86 TGGEL---FEDIVAREYYSEADASHCIQQILESVNHCHLNG---IVHRDLKPENLLLASK 139
Query: 121 MKP---KISDFGLARIFAKESLKANTEQ-----VVGTIGYIPPEYARQGVYSTKSDVFSF 172
K K++DFGLA ++ +Q GT GY+ PE R+ Y D+++
Sbjct: 140 SKGAAVKLADFGLA-------IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 173 GVLLLQIISG 182
GV+L ++ G
Sbjct: 193 GVILYILLVG 202
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 81 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 140 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 188
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VGT+ Y+PPE + S ++
Sbjct: 189 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 299
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 300 --VLKC------CLKRDPKQRISIPEL 318
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I+ GL +L + II+RDLK N++L + KI+DFG+ + + + T + GT
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGT 183
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINEN---LSILEH 200
YI PE Y D +++GVLL ++++G+ G +E+ SI+EH
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ--PPFDGEDEDELFQSIMEH 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 43/261 (16%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL---- 65
A+KK+ + + + +EVML A L H ++R ++ + + KS
Sbjct: 35 AIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 66 -----DCYLFDPIRRLILDWKKRVH--IIEGITQGLLYLQEYSRLTIIHRDLKASNILLG 118
+ L+D I L+ ++ + + I + L Y+ IIHRDLK NI +
Sbjct: 94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFID 150
Query: 119 EDMKPKISDFGLARIFAK--ESLKANTEQV----------VGTIGYIPPEYAR-QGVYST 165
E KI DFGLA+ + + LK +++ + +GT Y+ E G Y+
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210
Query: 166 KSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSC 225
K D++S G++ ++I M E ++IL+ + +EF F D++
Sbjct: 211 KIDMYSLGIIFFEMIYPFSTGM-----ERVNILKKLRSV-----SIEFPPDFDDNKMKVE 260
Query: 226 KLMRCLEIALLCVQENPNDRP 246
K +I L + +PN RP
Sbjct: 261 K-----KIIRLLIDHDPNKRP 276
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 6 GEVIAVKKLSKSSAQGFE---EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVK L++ + + + K E+ +H ++I++ + +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEG--ITQGLLYLQEY-SRLTIIHRDLKASNILLGE 119
L FD I + RV +E + Q +L +Y R ++HRDLK N+LL
Sbjct: 96 GEL----FDYICK-----HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLLLQ 178
M KI+DFGL+ + + ++ G+ Y PE +Y+ + D++S GV+L
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISGRLYAGPEVDIWSCGVIL-- 201
Query: 179 IISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEI 233
++LCG EH L+K +G F +R+ + LM L++
Sbjct: 202 ------YALLCGTLPFDD--EHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 3 LPCGEVIAVKKLS--KSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYM 60
+P G+ A K ++ K SA+ ++ + E + L+H N++R+ + LV++ +
Sbjct: 26 IPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGED 120
L D + R H I+ I + + + I+HRDLK N+LL
Sbjct: 86 TGGEL---FEDIVAREYYSEADASHCIQQILESVNHCHLNG---IVHRDLKPENLLLASK 139
Query: 121 MKP---KISDFGLARIFAKESLKANTEQ-----VVGTIGYIPPEYARQGVYSTKSDVFSF 172
K K++DFGLA ++ +Q GT GY+ PE R+ Y D+++
Sbjct: 140 SKGAAVKLADFGLA-------IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWAC 192
Query: 173 GVLLLQIISG 182
GV+L ++ G
Sbjct: 193 GVILYILLVG 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 31/236 (13%)
Query: 6 GEVIAVKKLSKSSAQGFE---EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVK L++ + + + K E+ +H ++I++ + +V EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEG--ITQGLLYLQEY-SRLTIIHRDLKASNILLGE 119
L FD I + RV +E + Q +L +Y R ++HRDLK N+LL
Sbjct: 96 GEL----FDYICK-----HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146
Query: 120 DMKPKISDFGLARIFAK-ESLKANTEQVVGTIGYIPPEYARQGVYS-TKSDVFSFGVLLL 177
M KI+DFGL+ + + E L+ + G+ Y PE +Y+ + D++S GV+L
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRTSC----GSPNYAAPEVISGRLYAGPEVDIWSCGVIL- 201
Query: 178 QIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEI 233
++LCG EH L+K +G F +R+ + LM L++
Sbjct: 202 -------YALLCGTLPFDD--EHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + S + Y+ ++
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ + ++HRDLK SN+L+ KI D
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICD 187
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLARI E + V T Y PE TKS D++S G +L +++S +
Sbjct: 188 FGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 37 HVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLY 96
H N+I++ + LV++ M L YL ++ L K+ I+ + + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICA 126
Query: 97 LQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLA-RIFAKESLKANTEQVVGTIGYIPP 155
L +L I+HRDLK NILL +DM K++DFG + ++ E L+ +V GT Y+ P
Sbjct: 127 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAP 179
Query: 156 EYARQGV------YSTKSDVFSFGVLLLQIISG 182
E + Y + D++S GV++ +++G
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 7 EVIAVKKLSKSSAQGFEEFKN-----EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
+++A+KK+ ++ N E+ L +L H N+I +L LV+++M
Sbjct: 36 QIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM- 94
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L+ + D L+L + QGL YL ++ I+HRDLK +N+LL E+
Sbjct: 95 ETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENG 149
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGVLLLQ 178
K++DFGLA+ F + +A QVV T Y PE AR +Y D+++ G +L +
Sbjct: 150 VLKLADFGLAKSFGSPN-RAYXHQVV-TRWYRAPELLFGAR--MYGVGVDMWAVGCILAE 205
Query: 179 IISGKRLSMLCGINENLSILEHAYE 203
++ R+ L G + +L L +E
Sbjct: 206 LLL--RVPFLPG-DSDLDQLTRIFE 227
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +G+ +L + IHRDL A NILL KI DFGLAR +S
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+S+G+ L ++ S
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 53 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 112 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 160
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A + + VGT+ Y+PPE + S ++
Sbjct: 161 VDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 271
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 272 --VLKC------CLKRDPKQRISIPEL 290
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +G+ +L + IHRDL A NILL KI DFGLAR +S
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+S+G+ L ++ S
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +G+ +L + IHRDL A NILL KI DFGLAR +S
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+S+G+ L ++ S
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR A E
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 17/153 (11%)
Query: 37 HVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLY 96
H ++I ++ S LV++ M L YL + ++ L K+ I+ + + + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSF 215
Query: 97 LQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLA-RIFAKESLKANTEQVVGTIGYIPP 155
L + I+HRDLK NILL ++M+ ++SDFG + + E L+ ++ GT GY+ P
Sbjct: 216 LHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGTPGYLAP 268
Query: 156 EYAR------QGVYSTKSDVFSFGVLLLQIISG 182
E + Y + D+++ GV+L +++G
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR A E
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR A E
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 37 HVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLY 96
H N+I++ + LV++ M L YL ++ L K+ I+ + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICA 139
Query: 97 LQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLA-RIFAKESLKANTEQVVGTIGYIPP 155
L +L I+HRDLK NILL +DM K++DFG + ++ E L+ +V GT Y+ P
Sbjct: 140 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----EVCGTPSYLAP 192
Query: 156 EYARQGV------YSTKSDVFSFGVLLLQIISG 182
E + Y + D++S GV++ +++G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +G+ +L + IHRDL A NILL KI DFGLAR +S
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+S+G+ L ++ S
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
+ +G+ +L + IHRDL A NILL KI DFGLAR +S
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+ ++ PE VY+ +SDV+S+G+ L ++ S
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 37 HVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLY 96
H N+I++ + LV++ M L YL ++ L K+ I+ + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICA 139
Query: 97 LQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLA-RIFAKESLKANTEQVVGTIGYIPP 155
L +L I+HRDLK NILL +DM K++DFG + ++ E L++ V GT Y+ P
Sbjct: 140 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS----VCGTPSYLAP 192
Query: 156 EYARQGV------YSTKSDVFSFGVLLLQIISG 182
E + Y + D++S GV++ +++G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHII 87
E+ L +L+H N++R+ ++ LV+E+ ++ L Y FD LD + +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFL 107
Query: 88 EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVV 147
+ +GL + +SR ++HRDLK N+L+ + + K++DFGLAR F ++ + +VV
Sbjct: 108 FQLLKGLGFC--HSR-NVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV 163
Query: 148 GTIGYIPPEYARQG-VYSTKSDVFSFGVLLLQIISGKR 184
T+ Y PP+ +YST D++S G + ++ + R
Sbjct: 164 -TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRV--------------LGFCIDS 50
C + +A+KK+ + Q + E+ + +L H N+++V +G +
Sbjct: 35 CDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 51 EERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDL 110
+V EYM + P +L+ R+ + + + +GL Y+ + ++HRDL
Sbjct: 95 NSVYIVQEYMETDLANVLEQGP----LLEEHARLFMYQ-LLRGLKYIHSAN---VLHRDL 146
Query: 111 KASNILLG-EDMKPKISDFGLARIFAKE-SLKANTEQVVGTIGYIPPEYARQGVYSTKS- 167
K +N+ + ED+ KI DFGLARI S K + + + T Y P TK+
Sbjct: 147 KPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI 206
Query: 168 DVFSFGVLLLQIISGKRLSMLCGINE 193
D+++ G + ++++GK ++ G +E
Sbjct: 207 DMWAAGCIFAEMLTGK--TLFAGAHE 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
MP + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 123 MPGGDM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
MP + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 123 MPGGDM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCID-------SEERMLVYE 58
GE +AVK S Q + + E+ T L+H N +LGF S + L+
Sbjct: 31 GESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDN---ILGFIASDMTSRNSSTQLWLITH 86
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKAS 113
Y + SL +D ++R L+ + + GL +L + I HRD K+
Sbjct: 87 YHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 114 NILLGEDMKPKISDFGLARIFAKES--LKANTEQVVGTIGYIPPEYARQGVYS------T 165
N+L+ +++ I+D GLA + ++ S L VGT Y+ PE + + +
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYK 202
Query: 166 KSDVFSFGVLLLQIISGKRLSMLCGINEN 194
+D+++FG++L +I R +++ GI E+
Sbjct: 203 WTDIWAFGLVLWEI---ARRTIVNGIVED 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 93
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 148
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 204 VDIWSVGCIMAELLTGRTL 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 93
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 148
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMHYNQT 203
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 204 VDIWSVGCIMAELLTGRTL 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 52 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 99
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 100 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 154
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 210 VDIWSVGCIMAELLTGRTL 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 93
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 148
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 204 VDIWSVGCIMAELLTGRTL 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 56 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 103
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 104 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 158
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 159 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 213
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 214 VDIWSVGCIMAELLTGRTL 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 113
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 168
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 224 VDIWSVGCIMAELLTGRTL 242
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 113
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 168
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNWMHYNQT 223
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 224 VDIWSVGCIMAELLTGRTL 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 89
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 144
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 200 VDIWSVGCIMAELLTGRTL 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 65 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 112
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 113 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 167
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 168 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 223 VDIWSVGCIMAELLTGRTL 241
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 89
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 144
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATRWYRAPEIMLNWMHYNQT 199
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 200 VDIWSVGCIMAELLTGRTL 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 35 LQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEG--ITQ 92
L+H ++I++ + ++V EY + LFD I KKR+ EG Q
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGE-----LFDYIVE-----KKRMTEDEGRRFFQ 115
Query: 93 GLLYLQEY-SRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIG 151
++ EY R I+HRDLK N+LL +++ KI+DFGL+ I + + G+
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPN 172
Query: 152 YIPPEYARQGVYS-TKSDVFSFGVLLLQIISGK 183
Y PE +Y+ + DV+S G++L ++ G+
Sbjct: 173 YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K +E ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
P + F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 123 APGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFGLA+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCID-------SEERMLVYE 58
GE +AVK S + + + E+ T L+H N +LGF S + L+
Sbjct: 60 GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN---ILGFIASDMTSRHSSTQLWLITH 115
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKAS 113
Y SL +D ++ LD + I+ I GL +L + I HRDLK+
Sbjct: 116 YHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 171
Query: 114 NILLGEDMKPKISDFGLARIFAKES--LKANTEQVVGTIGYIPPEYARQGVY------ST 165
NIL+ ++ + I+D GLA + ++ + L VGT Y+ PE + +
Sbjct: 172 NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK 231
Query: 166 KSDVFSFGVLLLQI 179
+ D+++FG++L ++
Sbjct: 232 RVDIWAFGLVLWEV 245
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 51/267 (19%)
Query: 7 EVIAVK--KLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERMLVYEYMPN 62
++ A+K L ++ Q + ++NE+ KLQ + +IR+ + I + +V E N
Sbjct: 81 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139
Query: 63 KSLDCYL-----FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
L+ +L DP R WK + + I Q I+H DLK +N L+
Sbjct: 140 IDLNSWLKKKKSIDPWERKSY-WKNMLEAVHTIHQH----------GIVHSDLKPANFLI 188
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS---------- 167
+ M K+ DFG+A ++ + VG + Y+PPE + S ++
Sbjct: 189 VDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 168 -DVFSFGVLLLQIISGKR--LSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSS 224
DV+S G +L + GK ++ I++ +I++ +E+ EF D D
Sbjct: 248 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-------EFPDIPEKDLQD- 299
Query: 225 CKLMRCLEIALLCVQENPNDRPSMLEV 251
+++C C++ +P R S+ E+
Sbjct: 300 --VLKC------CLKRDPKQRISIPEL 318
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 98
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 99 SFL--QVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 153
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 154 DFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLSK S + E+ L ++H N+I +L + P
Sbjct: 58 TGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 105
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 106 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 160
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 216 VDIWSVGCIMAELLTGRTL 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEV-MLTAKLQHVNLIRVLGFCID------SEERMLVY 57
G++ A+K + + + EE K E+ ML H N+ G I ++ LV
Sbjct: 48 TGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
E+ S+ L + L + +I I +GL +L ++ +IHRD+K N+LL
Sbjct: 107 EFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLL 162
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-----ARQGVYSTKSDVFSF 172
E+ + K+ DFG++ + + NT +GT ++ PE Y KSD++S
Sbjct: 163 TENAEVKLVDFGVSAQLDRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220
Query: 173 GVLLLQIISG 182
G+ +++ G
Sbjct: 221 GITAIEMAEG 230
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 12 KKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEER--------MLVYEYMPNK 63
+KL+KS Q FK E LQH N++R DS E +LV E +
Sbjct: 62 RKLTKSERQ---RFKEEAEXLKGLQHPNIVRFY----DSWESTVKGKKCIVLVTELXTSG 114
Query: 64 SLDCYL--FDPIR-RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL-GE 119
+L YL F + +++ W ++ I +GL +L + IIHRDLK NI + G
Sbjct: 115 TLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLHTRT-PPIIHRDLKCDNIFITGP 167
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQ 178
KI D GLA + KA V+GT + PE + Y DV++FG L+
Sbjct: 168 TGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPEXYEEK-YDESVDVYAFGXCXLE 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
AVK + KS EE E++L QH N+I + D + LV E M L L
Sbjct: 56 AVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKDVYDDGKHVYLVTELMRGGEL---L 109
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL-LGEDMKP---KI 125
+R+ ++ ++ I + + YL ++HRDLK SNIL + E P +I
Sbjct: 110 DKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRI 166
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFG A+ E+ T T ++ PE ++ Y D++S G+LL +++G
Sbjct: 167 CDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCID-------SEERMLVYE 58
GE +AVK S + + + E+ T L+H N +LGF S + L+
Sbjct: 31 GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN---ILGFIASDMTSRHSSTQLWLITH 86
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKAS 113
Y SL +D ++ LD + I+ I GL +L + I HRDLK+
Sbjct: 87 YHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 114 NILLGEDMKPKISDFGLARIFAKES--LKANTEQVVGTIGYIPPEYARQGVY------ST 165
NIL+ ++ + I+D GLA + ++ + L VGT Y+ PE + +
Sbjct: 143 NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK 202
Query: 166 KSDVFSFGVLLLQI 179
+ D+++FG++L ++
Sbjct: 203 RVDIWAFGLVLWEV 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 186
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
AVK + KS EE E++L QH N+I + D + LV E M L L
Sbjct: 56 AVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKDVYDDGKHVYLVTELMRGGEL---L 109
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL-LGEDMKP---KI 125
+R+ ++ ++ I + + YL ++HRDLK SNIL + E P +I
Sbjct: 110 DKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRI 166
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFG A+ E+ T T ++ PE ++ Y D++S G+LL +++G
Sbjct: 167 CDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 186
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCID-------SEERMLVYE 58
GE +AVK S + + + E+ T L+H N +LGF S + L+
Sbjct: 31 GENVAVKIFSSRDEKSWFR-ETELYNTVMLRHEN---ILGFIASDMTSRHSSTQLWLITH 86
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKAS 113
Y SL +D ++ LD + I+ I GL +L + I HRDLK+
Sbjct: 87 YHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 114 NILLGEDMKPKISDFGLARIFAKES--LKANTEQVVGTIGYIPPEYARQGVY------ST 165
NIL+ ++ + I+D GLA + ++ + L VGT Y+ PE + +
Sbjct: 143 NILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK 202
Query: 166 KSDVFSFGVLLLQI 179
+ D+++FG++L ++
Sbjct: 203 RVDIWAFGLVLWEV 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 9 IAVKKLSKSSAQGFEEFKN--EVMLTAKLQHVNLIRVLG-FCIDSEERMLVYEYMPNKSL 65
+AVKKLS+ + E+ L L+H N+I +L F + Y+ +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
L + ++ L + ++ + +GL Y+ IIHRDLK SN+ + ED + +I
Sbjct: 116 GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRI 172
Query: 126 SDFGLARIFAKESLKANTEQV--VGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
DFGLAR +A+ E V T Y PE + Y+ D++S G ++ +++ G
Sbjct: 173 LDFGLAR-------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 183 KRL 185
K L
Sbjct: 226 KAL 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 141 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 192
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I GL +L + + II+RDLK N+LL +D +ISD GLA ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 42 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 89
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + +L D + +I I +GL Y+ IIH
Sbjct: 90 RSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 144
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 200 VDIWSVGCIMAELLTGRTL 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 168 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I GL +L + + II+RDLK N+LL +D +ISD GLA ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGFEEFK-NEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 119 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 176 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 168 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I GL +L + + II+RDLK N+LL +D +ISD GLA ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 188 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 170 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I GL +L + + II+RDLK N+LL +D +ISD GLA ++ + T+ GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGT 352
Query: 150 IGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
G++ PE Y D F+ GV L ++I+ +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 172 FGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 173 FGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 48 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 95
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 96 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 150
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DFGLAR E V T Y PE + Y+
Sbjct: 151 RDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 206 VDIWSVGCIMAELLTGRTL 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 105 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 159 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 187
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 105 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 159 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 4 PCGEVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
P GE++A+KK+ F E+ + +H N+I + Y+
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ + L I +L HI I Q L ++ +IHRDLK SN+L+ +
Sbjct: 94 ELMQTDLHRVISTQML---SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD 150
Query: 123 PKISDFGLARIFAKESLKANTE---------QVVGTIGYIPPEYA-RQGVYSTKSDVFSF 172
K+ DFGLARI ES N+E + V T Y PE YS DV+S
Sbjct: 151 LKVCDFGLARII-DESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 173 GVLLLQI 179
G +L ++
Sbjct: 210 GCILAEL 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTG 187
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 173 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 117 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 174 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 108 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 165 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 168 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 168 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 136 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 187
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 228
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 178
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 166 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 137 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 188
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 4 PCGEVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
P GE++A+KK+ F E+ + +H N+I + Y+
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ + L I +L HI I Q L ++ +IHRDLK SN+L+ +
Sbjct: 94 ELMQTDLHRVISTQML---SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD 150
Query: 123 PKISDFGLARIFAKESLKANTE---QVVGTIGYIPPEYAR-------QGVYSTKSDVFSF 172
K+ DFGLARI ES N+E Q G Y+ + R YS DV+S
Sbjct: 151 LKVCDFGLARII-DESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 173 GVLLLQII 180
G +L ++
Sbjct: 210 GCILAELF 217
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA 130
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 187
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 188 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 166 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 168 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHII 87
E+ L +L+H N++R+ ++ LV+E+ ++ L Y FD LD + +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFL 107
Query: 88 EGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVV 147
+ +GL + +SR ++HRDLK N+L+ + + K+++FGLAR F ++ + +VV
Sbjct: 108 FQLLKGLGFC--HSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV 163
Query: 148 GTIGYIPPEYARQG-VYSTKSDVFSFGVLLLQIISGKR 184
T+ Y PP+ +YST D++S G + ++ + R
Sbjct: 164 -TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 186
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 135 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 186
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 129 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 180
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 126 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 177
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 4 PCGEVIAVKKLSKSSAQGFE-EFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
P GE++A+KK+ F E+ + +H N+I + Y+
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
+ + L I +L HI I Q L ++ +IHRDLK SN+L+ +
Sbjct: 94 ELMQTDLHRVISTQML---SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD 150
Query: 123 PKISDFGLARIFAKESLKANTE---------QVVGTIGYIPPEYA-RQGVYSTKSDVFSF 172
K+ DFGLARI ES N+E + V T Y PE YS DV+S
Sbjct: 151 LKVCDFGLARII-DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 173 GVLLLQI 179
G +L ++
Sbjct: 210 GCILAEL 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 127 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 178
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 183
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 153 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXG 204
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 183
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 193
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 128 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 179
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 142 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 193
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 23 EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIR-------- 74
E+ EV AKL+H ++R ++ E + S YL+ ++
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLK 103
Query: 75 -----RLILDWKKR---VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
R ++ ++R +HI I + + +L ++HRDLK SNI D K+
Sbjct: 104 DWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 160
Query: 127 DFGLARIFAKESLK----------ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
DFGL ++ + A VGT Y+ PE YS K D+FS G++L
Sbjct: 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL 220
Query: 177 LQII 180
+++
Sbjct: 221 FELL 224
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 141 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 192
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 233
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 132 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 183
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 150 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 201
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 242
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL- 65
+A+KKLS+ + + E++L + H N+I +L + P KSL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 66 ---DCYL--------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
D Y+ + ++ LD ++ +++ + G+ +L IIHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSN 156
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
I++ D KI DFGLAR + T VV T Y PE Y D++S GV
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 175 LLLQIISG 182
++ ++I G
Sbjct: 214 IMGEMIKG 221
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 159 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 210
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 153 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 204
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
I + L +L+E L IIHRD+K SNILL K+ DFG++ K
Sbjct: 130 ITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD-- 185
Query: 146 VVGTIGYIPPE-----YARQGVYSTKSDVFSFGVLLLQIISGK 183
G Y+ PE +RQG Y +SDV+S G+ L ++ +G+
Sbjct: 186 -AGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGLAR E
Sbjct: 149 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 200
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 241
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K +E ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
P + F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 123 APGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFGLA+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
E++AVK + + +A E + E++ L+H N++R + ++ EY L
Sbjct: 46 ELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP--K 124
+ + R + + + G+ Y + I HRDLK N LL P K
Sbjct: 105 ERICNAGR---FSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLK 158
Query: 125 ISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQIISG 182
I DFG ++K S L + + VGT YI PE + Y K +DV+S GV L ++ G
Sbjct: 159 ICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
AVK + KS EE E++L QH N+I + D + +V E M L L
Sbjct: 51 AVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKDVYDDGKYVYVVTELMKGGEL---L 104
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL-LGEDMKP---KI 125
+R+ ++ ++ IT+ + YL ++HRDLK SNIL + E P +I
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRI 161
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFG A+ E+ T T ++ PE + Y D++S GVLL +++G
Sbjct: 162 CDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 123 VPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL- 65
+A+KKLS+ + + E++L + H N+I +L + P KSL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 66 ---DCYL--------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
D Y+ + ++ LD ++ +++ + G+ +L IIHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSN 156
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
I++ D KI DFGLAR + T VV T Y PE Y D++S GV
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 175 LLLQIISG 182
++ ++I G
Sbjct: 214 IMGEMIKG 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ +KSS +G E+ + EV + ++QH N+I + + + +L+ E + L +L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPK----I 125
+ + L ++ ++ I G+ YL L I H DLK NI+L + PK I
Sbjct: 106 AE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA K + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 160 IDFGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 98
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 99 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 153
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 154 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 115 DLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 98
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 99 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 153
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 154 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 45 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 103
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 104 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 158
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 159 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 37 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 95
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 96 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 150
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 151 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 42 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 100
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 101 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 155
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 156 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 43 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 101
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 102 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 156
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 157 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 68 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 126
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 127 SFL--QVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 181
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 182 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A++K+S Q + + E+ + + +H N+I + + Y+ ++
Sbjct: 55 VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + +H N+I + + Y+ ++
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 170 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 9 IAVKKLSKSSAQGFEEFKN--EVMLTAKLQHVNLIRVLG-FCIDSEERMLVYEYMPNKSL 65
+AVKKLS+ + E+ L L+H N+I +L F + Y+ +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
L + ++ L + ++ + +GL Y+ IIHRDLK SN+ + ED + +I
Sbjct: 116 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRI 172
Query: 126 SDFGLARIFAKESLKANTEQV--VGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
DFGLAR +A+ E V T Y PE + Y+ D++S G ++ +++ G
Sbjct: 173 LDFGLAR-------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 183 KRL 185
K L
Sbjct: 226 KAL 228
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 9 IAVKKLSKSSAQGFEEFKN--EVMLTAKLQHVNLIRVLG-FCIDSEERMLVYEYMPNKSL 65
+AVKKLS+ + E+ L L+H N+I +L F + Y+ +
Sbjct: 48 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
L + ++ L + ++ + +GL Y+ IIHRDLK SN+ + ED + +I
Sbjct: 108 GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRI 164
Query: 126 SDFGLARIFAKESLKANTEQV--VGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISG 182
DFGLAR +A+ E V T Y PE + Y+ D++S G ++ +++ G
Sbjct: 165 LDFGLAR-------QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 183 KRL 185
K L
Sbjct: 218 KAL 220
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEER--MLVYEYMPNKSLDCYLFDPIRRLILDWKKRVH 85
E+ L +L+H N+I + + +R L+++Y + D + R KK V
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH---DLWHIIKFHRASKANKKPVQ 124
Query: 86 IIEGITQGLLY-----LQEYSRLTIIHRDLKASNILL----GEDMKPKISDFGLARIFAK 136
+ G+ + LLY + ++HRDLK +NIL+ E + KI+D G AR+F
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF-N 183
Query: 137 ESLK--ANTEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
LK A+ + VV T Y PE + TK+ D+++ G + ++++ +
Sbjct: 184 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + + LQ+ + L + + +R+ V EY
Sbjct: 32 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 91
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +S +++RDLK N++L +D
Sbjct: 92 GGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL--HSEKNVVYRDLKLENLMLDKDG 146
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE +K A + GT Y+ PE Y D + GV++ ++
Sbjct: 147 HIKITDFGL----CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
Query: 180 ISGK 183
+ G+
Sbjct: 203 MCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + + LQ+ + L + + +R+ V EY
Sbjct: 34 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 93
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +S +++RDLK N++L +D
Sbjct: 94 GGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL--HSEKNVVYRDLKLENLMLDKDG 148
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE +K A + GT Y+ PE Y D + GV++ ++
Sbjct: 149 HIKITDFGL----CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
Query: 180 ISGK 183
+ G+
Sbjct: 205 MCGR 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 125 GGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 179 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 182 G 182
G
Sbjct: 234 G 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + + LQ+ + L + + +R+ V EY
Sbjct: 33 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 92
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +S +++RDLK N++L +D
Sbjct: 93 GGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL--HSEKNVVYRDLKLENLMLDKDG 147
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE +K A + GT Y+ PE Y D + GV++ ++
Sbjct: 148 HIKITDFGL----CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 180 ISGK 183
+ G+
Sbjct: 204 MCGR 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELR 98
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ K+
Sbjct: 99 SFL--QVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLG 153
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 154 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 125 GGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 179 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 182 G 182
G
Sbjct: 234 G 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKS 64
E++AVK + + E K E++ L+H N++R + +V EY
Sbjct: 43 ANELVAVKYIERGEKID-ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 65 LDCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L F+ I R D + + + G+ Y + + HRDLK N LL
Sbjct: 102 L----FERICNAGRFSEDEAR--FFFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSP 152
Query: 122 KP--KISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLL 177
P KI+DFG ++K S L + + VGT YI PE + Y K +DV+S GV L
Sbjct: 153 APRLKIADFG----YSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLY 208
Query: 178 QIISG 182
++ G
Sbjct: 209 VMLVG 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 420 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELR 478
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ + K+
Sbjct: 479 SFL--QVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLG 533
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 534 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 65 TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 125 GGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 179 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 182 G 182
G
Sbjct: 234 G 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI D+GLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Query: 9 IAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDC 67
+A+KK+S Q + + E+ + +H N+I + + Y+ ++
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 68 YLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISD 127
L+ ++ L + + I +GL Y+ ++HRDLK SN+LL KI D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 128 FGLARIFAKESLKAN-TEQVVGTIGYIPPEYARQGVYSTKS-DVFSFGVLLLQIISGK 183
FGLAR+ + + V T Y PE TKS D++S G +L +++S +
Sbjct: 170 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
P + F +RR+ + R + Q +L + L +I+RDLK N+++
Sbjct: 123 APGGEM----FSHLRRIGRFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLMI 174
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+ K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+
Sbjct: 175 DQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 178 QIISG 182
++ +G
Sbjct: 230 EMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 60 MPNKSLDCYLFDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
+P + F +RR+ + R + Q +L + L +I+RDLK N+L+
Sbjct: 124 VPGGEM----FSHLRRIGRFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLLI 175
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+ +++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+
Sbjct: 176 DQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 178 QIISG 182
++ +G
Sbjct: 231 EMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
+P + F +RR+ + R + Q +L + L +I+RDLK N+L+
Sbjct: 123 VPGGEM----FSHLRRIGRFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+ +++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+
Sbjct: 175 DQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 178 QIISG 182
++ +G
Sbjct: 230 EMAAG 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + + LQ+ + L + + +R+ V EY
Sbjct: 175 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 234
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +S +++RDLK N++L +D
Sbjct: 235 GGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL--HSEKNVVYRDLKLENLMLDKDG 289
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE +K A + GT Y+ PE Y D + GV++ ++
Sbjct: 290 HIKITDFGL----CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
Query: 180 ISGK 183
+ G+
Sbjct: 346 MCGR 349
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 18/185 (9%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
+P + F +RR+ + R + Q +L + L +I+RDLK N+L+
Sbjct: 123 VPGGEM----FSHLRRIGRFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLLI 174
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+ +++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+
Sbjct: 175 DQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 178 QIISG 182
++ +G
Sbjct: 230 EMAAG 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESL--KANTEQVV 147
I L++L + II+RDLK N+LL + K++DFG+ KE + T
Sbjct: 133 IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGM----CKEGICNGVTTATFC 185
Query: 148 GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
GT YI PE ++ +Y D ++ GVLL +++ G
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 105 IIHRDLKASNILL---GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQG 161
++HRDLK N+L ++++ KI DFG AR+ ++ T T+ Y PE Q
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP--CFTLHYAAPELLNQN 184
Query: 162 VYSTKSDVFSFGVLLLQIISGK 183
Y D++S GV+L ++SG+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR A S E V T Y PE Y D++S G ++ ++I G
Sbjct: 166 KILDFGLART-AGTSFMMTPEVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 124 VPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 177
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 178 QGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 180 ISG 182
+G
Sbjct: 233 AAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 49 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 108
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 109 VPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 162
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 163 QGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
Query: 180 ISG 182
+G
Sbjct: 218 AAG 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 62 NKSLDCYLFDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+ F +RR+ + R + Q +L + L +I+RDLK N+L+ +
Sbjct: 118 GGEM----FSHLRRIGRFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLLIDQ 169
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 170 QGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 180 ISG 182
+G
Sbjct: 225 AAG 227
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNL--IRVLGFCI-DSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN + L F D+ +V EY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 60 MPNKSLDCYLFDPIRRL--ILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
P + F +RR+ + R + Q +L + L +I+RDLK N+++
Sbjct: 124 APGGEM----FSHLRRIGRFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLMI 175
Query: 118 GEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
+ K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+
Sbjct: 176 DQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 178 QIISG 182
++ +G
Sbjct: 231 EMAAG 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + + LQ+ + L + + +R+ V EY
Sbjct: 172 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +S +++RDLK N++L +D
Sbjct: 232 GGELFFHL--SRERVFSEDRARFYGAE-IVSALDYL--HSEKNVVYRDLKLENLMLDKDG 286
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE +K A + GT Y+ PE Y D + GV++ ++
Sbjct: 287 HIKITDFGL----CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
Query: 180 ISGK 183
+ G+
Sbjct: 343 MCGR 346
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 123 VPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 124 VPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 177
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 178 QGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 180 ISG 182
+G
Sbjct: 233 AAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 123 VPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
P + F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 123 APGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
+P + F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 123 VPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 58 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 117
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 118 GGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 171
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 172 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 182 G 182
G
Sbjct: 227 G 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAP 125
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 126 GGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG 179
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 180 YIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 182 G 182
G
Sbjct: 235 G 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNL--IRVLGFCI-DSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN + L F D+ +V EY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
P + F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 124 APGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ 177
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 178 QGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 180 ISG 182
+G
Sbjct: 233 AAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNL--IRVLGFCI-DSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN + L F D+ +V EY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
P + F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 124 APGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ 177
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
K++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 178 QGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 180 ISG 182
+G
Sbjct: 233 AAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 126 GGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 180 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 182 G 182
G
Sbjct: 235 G 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 126 GGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 180 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 182 G 182
G
Sbjct: 235 G 235
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 126 GGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 179
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 180 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 182 G 182
G
Sbjct: 235 G 235
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L + IHRD+K N+LL + K++DFG KE + + VGT YI
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYI 236
Query: 154 PPEYAR----QGVYSTKSDVFSFGVLLLQIISG 182
PE + G Y + D +S GV L +++ G
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L + IHRD+K N+LL + K++DFG KE + + VGT YI
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYI 241
Query: 154 PPEYAR----QGVYSTKSDVFSFGVLLLQIISG 182
PE + G Y + D +S GV L +++ G
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEYMP 61
G A+K L K ++ ++ + LQ VN L+++ D+ +V EY+P
Sbjct: 86 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 145
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
+ F +RR+ H Q +L + L +I+RDLK N+L+ +
Sbjct: 146 GGEM----FSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 199
Query: 122 KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++ +
Sbjct: 200 YIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 182 G 182
G
Sbjct: 255 G 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
+L L + IHRD+K N+LL + K++DFG KE + + VGT YI
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYI 241
Query: 154 PPEYAR----QGVYSTKSDVFSFGVLLLQIISG 182
PE + G Y + D +S GV L +++ G
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLG-FCIDS--EERMLVYEY 59
G +A+KKL + S + E+ L ++H N+I +L F D ++ Y
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVH-IIEGITQGLLYLQEYSRLTIIHRDLKASNILLG 118
MP D +L D R+ ++ + +GL Y+ IIHRDLK N+ +
Sbjct: 109 MPFMGTDLGKLMKHEKLGED---RIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVN 162
Query: 119 EDMKPKISDFGLARIFAKESLKANTEQ--VVGTIGYIPPEYARQGV-YSTKSDVFSFGVL 175
ED + KI DFGLAR +A++E V T Y PE + Y+ D++S G +
Sbjct: 163 EDCELKILDFGLAR-------QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCI 215
Query: 176 LLQIISGKRL 185
+ ++I+GK L
Sbjct: 216 MAEMITGKTL 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLK--- 140
+HI I + + +L ++HRDLK SNI D K+ DFGL ++ +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 141 -------ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
A VGT Y+ PE YS K D+FS G++L +++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 34 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 93
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 94 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 147
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 148 HIKITDFGL----CKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 180 ISGK 183
+ G+
Sbjct: 204 MCGR 207
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+AVKKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR + T VV T Y PE Y+ D++S G ++ +++ G
Sbjct: 166 KILDFGLARTACTNFMM--TPYVV-TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 142
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 143 HIKITDFGL----CKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 180 ISGK 183
+ G+
Sbjct: 199 MCGR 202
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 5 CGEVIAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
G +AVKKLS+ S + E+ L ++H N+I +L + P
Sbjct: 46 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 93
Query: 63 KSL----DCYLFDPI-----------RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH 107
+SL D YL + ++L D + +I I +GL Y+ IIH
Sbjct: 94 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIHSAD---IIH 148
Query: 108 RDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTK 166
RDLK SN+ + ED + KI DF LAR E V T Y PE + Y+
Sbjct: 149 RDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 167 SDVFSFGVLLLQIISGKRL 185
D++S G ++ ++++G+ L
Sbjct: 204 VDIWSVGCIMAELLTGRTL 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 142
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 143 HIKITDFGL----CKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 180 ISGK 183
+ G+
Sbjct: 199 MCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 142
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 143 HIKITDFGL----CKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 180 ISGK 183
+ G+
Sbjct: 199 MCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 32 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 91
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 92 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 145
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 146 HIKITDFGL----CKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 201
Query: 180 ISGK 183
+ G+
Sbjct: 202 MCGR 205
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL 65
E++AVK + + E K E++ L+H N++R + +V EY L
Sbjct: 43 NELVAVKYIERGEKID-ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 66 DCYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
F+ I R D + + + G+ Y + + HRDLK N LL
Sbjct: 102 ----FERICNAGRFSEDEAR--FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPA 152
Query: 123 P--KISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQ 178
P KI DFG ++K S L + + VGT YI PE + Y K +DV+S GV L
Sbjct: 153 PRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 208
Query: 179 IISG 182
++ G
Sbjct: 209 MLVG 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLXQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 46 FCIDSEERML--VYEYMPNKSLDCYL--FDPIRRLILDWKKRVHIIEGITQGLLYLQEYS 101
FC +++ L V EYMP L + +D + W K + +L L
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFY-----TAEVVLALDAIH 191
Query: 102 RLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYAR-- 159
+ +IHRD+K N+LL + K++DFG + E+ + + VGT YI PE +
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVLKSQ 250
Query: 160 --QGVYSTKSDVFSFGVLLLQIISG 182
G Y + D +S GV L +++ G
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 142
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 143 HIKITDFGL----CKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 180 ISGK 183
+ G+
Sbjct: 199 MCGR 202
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI DFGL R E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I + L +L +S+L++IHRD+K SN+L+ + K+ DFG++ + K + G
Sbjct: 118 IVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK---DIDAGC 172
Query: 150 IGYIPPEYA----RQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELW 205
Y+ PE Q YS KSD++S G+ +++ L+IL Y+ W
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIE----------------LAILRFPYDSW 216
Query: 206 KGGKGMEFVDSFLDDRNSSCKLMR----CLEIALLCVQENPNDRPSMLEV 251
G + + +++ + + ++ C+++N +RP+ E+
Sbjct: 217 --GTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 8 VIAVKKLSKSSAQGF-EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
+A+K ++ E+F E + + H ++++++G I ++ E L
Sbjct: 420 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELR 478
Query: 67 CYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKIS 126
+L +R+ LD + ++ L YL+ +HRD+ A N+L+ K+
Sbjct: 479 SFL--QVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLG 533
Query: 127 DFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQII 180
DFGL+R + ++S + I ++ PE +++ SDV+ FGV + +I+
Sbjct: 534 DFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 5 CGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN--LIRVLGFCIDSEERM-LVYEYMP 61
G A+K L K +E + V + LQ+ + L + + +R+ V EY
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 62 NKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDM 121
L +L R+ + + R + E I L YL +SR +++RD+K N++L +D
Sbjct: 89 GGELFFHL--SRERVFTEERARFYGAE-IVSALEYL--HSR-DVVYRDIKLENLMLDKDG 142
Query: 122 KPKISDFGLARIFAKESLK--ANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
KI+DFGL KE + A + GT Y+ PE Y D + GV++ ++
Sbjct: 143 HIKITDFGL----CKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
Query: 180 ISGK 183
+ G+
Sbjct: 199 MCGR 202
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL- 65
+A+KKLS+ + + E++L + H N+I +L + P KSL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 66 ---DCYL--------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
D Y+ + ++ LD ++ +++ + G+ +L IIHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSN 156
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
I++ D KI DFGLAR + T VV T Y PE Y D++S G
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 175 LLLQIISG 182
++ ++I G
Sbjct: 214 IMGEMIKG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 55/267 (20%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLV------------- 56
A+KK+ + + + +EV L A L H ++R + E R V
Sbjct: 35 AIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL--ERRNFVKPXTAVKKKSTLF 91
Query: 57 --YEYMPNKSLDCYLFDPIRRLILDWKKRVH--IIEGITQGLLYLQEYSRLTIIHRDLKA 112
EY N++L +D I L+ ++ + + I + L Y+ IIHR+LK
Sbjct: 92 IQXEYCENRTL----YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRNLKP 144
Query: 113 SNILLGEDMKPKISDFGLARIFAK--ESLKANTEQV----------VGTIGYIPPEYAR- 159
NI + E KI DFGLA+ + + LK +++ + +GT Y+ E
Sbjct: 145 XNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDG 204
Query: 160 QGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLD 219
G Y+ K D +S G++ + I G E ++IL+ + +EF F D
Sbjct: 205 TGHYNEKIDXYSLGIIFFEXI----YPFSTGX-ERVNILKKLRSV-----SIEFPPDFDD 254
Query: 220 DRNSSCKLMRCLEIALLCVQENPNDRP 246
++ K +I L + +PN RP
Sbjct: 255 NKXKVEK-----KIIRLLIDHDPNKRP 276
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 102
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 103 LMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTL 158
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 159 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 184 RL 185
L
Sbjct: 216 IL 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I + L +L +S+L++IHRD+K SN+L+ + K+ DFG++ K G
Sbjct: 162 IVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID---AGC 216
Query: 150 IGYIPPEYA----RQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELW 205
Y+ PE Q YS KSD++S G+ +++ L+IL Y+ W
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIE----------------LAILRFPYDSW 260
Query: 206 KGGKGMEFVDSFLDDRNSSCKLMR----CLEIALLCVQENPNDRPSMLEV 251
G + + +++ + + ++ C+++N +RP+ E+
Sbjct: 261 --GTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHII 87
E+ + ++++H N+I+VL + LV E LD + F R LD +I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFID-RHPRLDEPLASYIF 136
Query: 88 EGITQGLLYLQEYSRLT-IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQV 146
+ + YL RL IIHRD+K NI++ ED K+ DFG A + L
Sbjct: 137 RQLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---F 189
Query: 147 VGTIGYIPPEYARQGVY-STKSDVFSFGVLLLQII 180
GTI Y PE Y + +++S GV L ++
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL- 65
+A+KKLS+ + + E++L + H N+I +L + P KSL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 66 ---DCYL--------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
D Y+ + ++ LD ++ +++ + G+ +L IIHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
I++ D KI DFGLAR + T VV T Y PE Y D++S G
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 175 LLLQIISG 182
++ ++I G
Sbjct: 214 IMGEMIKG 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 3 LPCGEVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVN---LIRVLGFCIDSEERMLVYEY 59
+ G A+K L K ++ ++ + LQ VN L+++ D+ +V EY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 60 MPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGE 119
P + F +RR+ H Q +L + L +I+RDLK N+++ +
Sbjct: 123 APGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ 176
Query: 120 DMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQI 179
+++DFG A+ +K T + GT Y+ PE Y+ D ++ GVL+ ++
Sbjct: 177 QGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 180 ISG 182
+G
Sbjct: 232 AAG 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 110
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 111 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 166
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR + T VV T Y PE Y D++S G ++ ++I G
Sbjct: 167 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGF-CIDSEER------MLVY 57
GE +AVK S + + F+ E+ T L+H N +LGF D+++ LV
Sbjct: 52 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIAADNKDNGTWTQLWLVS 106
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKA 112
+Y + SL FD + R + + + + GL +L + I HRDLK+
Sbjct: 107 DYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 162
Query: 113 SNILLGEDMKPKISDFGLA--RIFAKESLKANTEQVVGTIGYIPPEYARQGVYS------ 164
NIL+ ++ I+D GLA A +++ VGT Y+ PE +
Sbjct: 163 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 222
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 197
++D+++ G++ +I R + GI+E+ +
Sbjct: 223 KRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 252
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGF-CIDSEER------MLVY 57
GE +AVK S + + F+ E+ T L+H N +LGF D+++ LV
Sbjct: 27 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIAADNKDNGTWTQLWLVS 81
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKA 112
+Y + SL FD + R + + + + GL +L + I HRDLK+
Sbjct: 82 DYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 137
Query: 113 SNILLGEDMKPKISDFGLA--RIFAKESLKANTEQVVGTIGYIPPEYARQGVYS------ 164
NIL+ ++ I+D GLA A +++ VGT Y+ PE +
Sbjct: 138 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 197
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 197
++D+++ G++ +I R + GI+E+ +
Sbjct: 198 KRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 227
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGF-CIDSEER------MLVY 57
GE +AVK S + + F+ E+ T L+H N +LGF D+++ LV
Sbjct: 65 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIAADNKDNGTWTQLWLVS 119
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKA 112
+Y + SL FD + R + + + + GL +L + I HRDLK+
Sbjct: 120 DYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175
Query: 113 SNILLGEDMKPKISDFGLA--RIFAKESLKANTEQVVGTIGYIPPEYARQGVYS------ 164
NIL+ ++ I+D GLA A +++ VGT Y+ PE +
Sbjct: 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 235
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 197
++D+++ G++ +I R + GI+E+ +
Sbjct: 236 KRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 265
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+AVKKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 107
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 108 LMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 163
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR + + T VV T Y PE Y D++S G ++ +++ G
Sbjct: 164 KILDFGLARTASTNFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 49 DSEERMLVYEYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHR 108
D+ +V EY P + F +RR+ H Q +L + L +I+R
Sbjct: 113 DNSNLYMVLEYAPGGEM----FSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 109 DLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSD 168
DLK N+L+ + K++DFG A+ +K T + GT Y+ PE Y+ D
Sbjct: 167 DLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 169 VFSFGVLLLQIISG 182
++ GVL+ ++ +G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGF-CIDSEER------MLVY 57
GE +AVK S + + F+ E+ T L+H N +LGF D+++ LV
Sbjct: 26 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIAADNKDNGTWTQLWLVS 80
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKA 112
+Y + SL FD + R + + + + GL +L + I HRDLK+
Sbjct: 81 DYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136
Query: 113 SNILLGEDMKPKISDFGLA--RIFAKESLKANTEQVVGTIGYIPPEYARQGVYS------ 164
NIL+ ++ I+D GLA A +++ VGT Y+ PE +
Sbjct: 137 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 196
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 197
++D+++ G++ +I R + GI+E+ +
Sbjct: 197 KRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGF-CIDSEER------MLVY 57
GE +AVK S + + F+ E+ T L+H N +LGF D+++ LV
Sbjct: 32 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIAADNKDNGTWTQLWLVS 86
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKA 112
+Y + SL FD + R + + + + GL +L + I HRDLK+
Sbjct: 87 DYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 142
Query: 113 SNILLGEDMKPKISDFGLA--RIFAKESLKANTEQVVGTIGYIPPEYARQGVYS------ 164
NIL+ ++ I+D GLA A +++ VGT Y+ PE +
Sbjct: 143 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 202
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 197
++D+++ G++ +I R + GI+E+ +
Sbjct: 203 KRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 232
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 33/213 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGF-CIDSEER------MLVY 57
GE +AVK S + + F+ E+ T L+H N +LGF D+++ LV
Sbjct: 29 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIAADNKDNGTWTQLWLVS 83
Query: 58 EYMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQ-----EYSRLTIIHRDLKA 112
+Y + SL FD + R + + + + GL +L + I HRDLK+
Sbjct: 84 DYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 139
Query: 113 SNILLGEDMKPKISDFGLA--RIFAKESLKANTEQVVGTIGYIPPEYARQGVYS------ 164
NIL+ ++ I+D GLA A +++ VGT Y+ PE +
Sbjct: 140 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 199
Query: 165 TKSDVFSFGVLLLQIISGKRLSMLCGINENLSI 197
++D+++ G++ +I R + GI+E+ +
Sbjct: 200 KRADIYAMGLVFWEI---ARRCSIGGIHEDYQL 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR + T VV T Y PE Y D++S G ++ ++I G
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL- 65
+A+KKLS+ + + E++L + H N+I +L + P KSL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 66 ---DCYL--------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
D Y+ + ++ LD ++ +++ + G+ +L IIHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
I++ D KI DFGLAR + T VV T Y PE Y D++S G
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 175 LLLQIISG 182
++ ++I G
Sbjct: 214 IMGEMIKG 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 37/172 (21%)
Query: 30 MLTAKLQHVNLIRVLGFCIDSEERM----------LVYEYMPNKSLDCYLFDPIRRLILD 79
+L +H N+IR FC + + + + EY+ K +PI
Sbjct: 70 LLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT----- 122
Query: 80 WKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG-----EDMKPKISDFGLARIF 134
+++ T GL +L L I+HRDLK NIL+ +K ISDFGL +
Sbjct: 123 ------LLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
Query: 135 A--KESLKANTEQVVGTIGYIPPEYARQGVYSTKS---DVFSFGVLLLQIIS 181
A + S + V GT G+I PE + + D+FS G + +IS
Sbjct: 174 AVGRHSFSRRS-GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI FGLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ Q+ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR + T VV T Y PE Y D++S G ++ ++I G
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 111
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 112 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 167
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KI DFGLAR + V T Y PE Y D++S G ++ ++I G
Sbjct: 168 KILDFGLARTAGTSFMMV---PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 32/188 (17%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSL- 65
+A+KKLS+ + + E++L + H N+I +L + P KSL
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 66 ---DCYL--------FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASN 114
D Y+ + ++ LD ++ +++ + G+ +L IIHRDLK SN
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 115 ILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGV 174
I++ D KI DFGLAR + T VV T Y PE Y D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 175 LLLQIISG 182
++ ++I G
Sbjct: 214 IMGEMIKG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + E V T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFM---MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 10 AVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
AVK + KS EE E++L QH N+I + D + +V E L L
Sbjct: 51 AVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKDVYDDGKYVYVVTELXKGGEL---L 104
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL-LGEDMKP---KI 125
+R+ ++ ++ IT+ + YL ++HRDLK SNIL + E P +I
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRI 161
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFG A+ E+ T T ++ PE + Y D++S GVLL ++G
Sbjct: 162 CDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ E +++DFG A+ +K T + GT
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTP 189
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI D GLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + A FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 45 GELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 99
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTII------HRDLKA 112
Y+P + R+ + + + I L Q + L I HRD+K
Sbjct: 100 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 209 AGCVLAELLLGQPI 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + A FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 45 GELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 99
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTII------HRDLKA 112
Y+P + R+ + + + I L Q + L I HRD+K
Sbjct: 100 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 209 AGCVLAELLLGQPI 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 147
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 148 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 203
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 204 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 184 RL 185
L
Sbjct: 261 IL 262
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + A FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 45 GELVAIKKVLQGKA-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 99
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTII------HRDLKA 112
Y+P + R+ + + + I L Q + L I HRD+K
Sbjct: 100 YVPAT---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 209 AGCVLAELLLGQPI 222
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI D GLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 20/189 (10%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDS-EERMLVYEYMPNK 63
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E++ +VY N
Sbjct: 45 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYL---NL 96
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKASNILL 117
LD Y+ + + R+ + + + I L Q + L IH RD+K N+LL
Sbjct: 97 VLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
Query: 118 GEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLL 176
D K+ DFG A+ + + N + P Y++ DV+S G +L
Sbjct: 156 DPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
Query: 177 LQIISGKRL 185
+++ G+ +
Sbjct: 214 AELLLGQPI 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+I I +GL Y+ IIHRDLK SN+ + ED + KI D GLAR E
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTG 181
Query: 146 VVGTIGYIPPEYARQGV-YSTKSDVFSFGVLLLQIISGKRL 185
V T Y PE + Y+ D++S G ++ ++++G+ L
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKAN--TEQVVGTIGYIPPEYARQGV 162
II+RDLK NI+L K++DFGL KES+ T GTI Y+ PE +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGL----CKESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 163 YSTKSDVFSFGVLLLQIISG 182
++ D +S G L+ +++G
Sbjct: 198 HNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 105 IIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKAN--TEQVVGTIGYIPPEYARQGV 162
II+RDLK NI+L K++DFGL KES+ T GTI Y+ PE +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGL----CKESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 163 YSTKSDVFSFGVLLLQIISG 182
++ D +S G L+ +++G
Sbjct: 198 HNRAVDWWSLGALMYDMLTG 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
E++AVK + + K E++ L+H N++R + +V EY L
Sbjct: 45 ELVAVKYIERGEKIA-ANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL- 102
Query: 67 CYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
F+ I R D + + + G+ Y + + HRDLK N LL P
Sbjct: 103 ---FERICNAGRFSEDEAR--FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAP 154
Query: 124 --KISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQI 179
KI DFG ++K S L + + VGT YI PE + Y K +DV+S GV L +
Sbjct: 155 RLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 180 ISG 182
+ G
Sbjct: 211 LVG 213
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 110
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 111 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 166
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 167 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
Query: 184 RL 185
L
Sbjct: 224 IL 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + E V T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFM---MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 108
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 109 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 164
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 165 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
Query: 184 RL 185
L
Sbjct: 222 IL 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 110
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 111 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 166
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 167 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
Query: 184 RL 185
L
Sbjct: 224 IL 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 147
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 148 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 203
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 204 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 184 RL 185
L
Sbjct: 261 IL 262
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 94 LLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYI 153
LL L ++H D+K +NI LG + K+ DFGL + E G Y+
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEGDPRYM 223
Query: 154 PPEYARQGVYSTKSDVFSFGVLLLQI 179
PE QG Y T +DVFS G+ +L++
Sbjct: 224 APELL-QGSYGTAADVFSLGLTILEV 248
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 109
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 110 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 166 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 184 RL 185
L
Sbjct: 223 IL 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 103
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 104 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 159
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 160 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 184 RL 185
L
Sbjct: 217 IL 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 102
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 103 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 158
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 159 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 184 RL 185
L
Sbjct: 216 IL 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 75 RLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIF 134
R L+ + R + E I L YL L I++RDLK NILL ++DFGL
Sbjct: 134 RCFLEPRARFYAAE-IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGL---- 185
Query: 135 AKESLKAN--TEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
KE+++ N T GT Y+ PE + Y D + G +L +++ G
Sbjct: 186 CKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--E 103
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 104 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 159
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 160 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 184 RL 185
L
Sbjct: 217 IL 218
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 45 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 99
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 100 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 209 AGCVLAELLLGQPI 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 46 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 100
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 101 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 151
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 152 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 209
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 210 AGCVLAELLLGQPI 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 197
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 45 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 99
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 100 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 209 AGCVLAELLLGQPI 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 52/260 (20%)
Query: 9 IAVKKLSKSSAQGFEEFKN------EVMLTAKLQH--VNLIRVLGFCIDSEERMLVYEYM 60
+A+K + K + E N EV+L K+ +IR+L + + +L+ E M
Sbjct: 36 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERM 95
Query: 61 PNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLY-----LQEYSRLTIIHRDLKASNI 115
+P++ L +R + E + + + ++ ++HRD+K NI
Sbjct: 96 ----------EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 145
Query: 116 LLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKS-DVFSFG 173
L+ + K+ DFG + K+++ + + GT Y PPE+ R Y +S V+S G
Sbjct: 146 LIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRYHGRSAAVWSLG 201
Query: 174 VLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMRCLEI 233
+LL M+CG EH E+ +G F R SS C +
Sbjct: 202 ILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRVSS----ECQHL 238
Query: 234 ALLCVQENPNDRPSMLEVSS 253
C+ P+DRP+ E+ +
Sbjct: 239 IRWCLALRPSDRPTFEEIQN 258
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 203
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 57 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 111
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 112 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 162
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 221 AGCVLAELLLGQPI 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 64 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 118
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 119 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 169
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 170 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 227
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 228 AGCVLAELLLGQPI 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 57 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 111
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 112 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 162
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 163 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 221 AGCVLAELLLGQPI 234
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 53 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 107
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 108 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 158
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 159 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 216
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 217 AGCVLAELLLGQPI 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 49 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 103
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 104 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 154
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 155 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 212
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 213 AGCVLAELLLGQPI 226
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 79 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 134 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 184
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSXICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 243 AGCVLAELLLGQPI 256
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 45 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 99
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 100 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 209 AGCVLAELLLGQPI 222
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 223
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 73 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 127
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 128 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 178
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-------YS 164
N+LL D K+ DFG A+ + + YI Y R Y+
Sbjct: 179 QNLLLDPDTAVLKLCDFGSAKQLVRGE---------PNVSYICSRYYRAPELIFGATDYT 229
Query: 165 TKSDVFSFGVLLLQIISGKRL 185
+ DV+S G +L +++ G+ +
Sbjct: 230 SSIDVWSAGCVLAELLLGQPI 250
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 58 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 112
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 113 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 163
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 164 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFGATDYTSSIDVWS 221
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 222 AGCVLAELLLGQPI 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 50 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 104
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 105 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 155
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFS 171
N+LL D K+ DFG A+ + + N + P Y++ DV+S
Sbjct: 156 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRYYRAPELIFGATDYTSSIDVWS 213
Query: 172 FGVLLLQIISGKRL 185
G +L +++ G+ +
Sbjct: 214 AGCVLAELLLGQPI 227
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 79 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 134 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 184
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-------YS 164
N+LL D K+ DFG A+ + + YI Y R Y+
Sbjct: 185 QNLLLDPDTAVLKLCDFGSAKQLVRGE---------PNVSYICSRYYRAPELIFGATDYT 235
Query: 165 TKSDVFSFGVLLLQIISGKRL 185
+ DV+S G +L +++ G+ +
Sbjct: 236 SSIDVWSAGCVLAELLLGQPI 256
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I + L +L +S+L++IHRD+K SN+L+ + K DFG++ + K + G
Sbjct: 145 IVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK---DIDAGC 199
Query: 150 IGYIPPEYA----RQGVYSTKSDVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELW 205
Y PE Q YS KSD++S G+ ++ L+IL Y+ W
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIE----------------LAILRFPYDSW 243
Query: 206 KGGKGMEFVDSFLDDRNSSCKLMR----CLEIALLCVQENPNDRPSMLEV 251
G + + +++ + + ++ C+++N +RP+ E+
Sbjct: 244 --GTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 81 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 135
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 136 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 186
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-------YS 164
N+LL D K+ DFG A+ + + YI Y R Y+
Sbjct: 187 QNLLLDPDTAVLKLCDFGSAKQLVRGE---------PNVSYICSRYYRAPELIFGATDYT 237
Query: 165 TKSDVFSFGVLLLQIISGKRL 185
+ DV+S G +L +++ G+ +
Sbjct: 238 SSIDVWSAGCVLAELLLGQPI 258
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 44/201 (21%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 83 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 137
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 138 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 188
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-------YS 164
N+LL D K+ DFG A+ + + YI Y R Y+
Sbjct: 189 QNLLLDPDTAVLKLCDFGSAKQLVRGE---------PNVSYICSRYYRAPELIFGATDYT 239
Query: 165 TKSDVFSFGVLLLQIISGKRL 185
+ DV+S G +L +++ G+ +
Sbjct: 240 SSIDVWSAGCVLAELLLGQPI 260
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 6 GEVIAVKKLSKSSAQGFEEFKN-EVMLTAKLQHVNLIRVLGFCIDSEERM------LVYE 58
GE++A+KK+ + + FKN E+ + KL H N++R+ F S E+ LV +
Sbjct: 124 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 178
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIH------RDLKA 112
Y+P + R+ + + + I L Q + L IH RD+K
Sbjct: 179 YVPET---------VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 229
Query: 113 SNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGV-YSTKSDVF 170
N+LL D K+ DFG A+ + + N + Y PE Y++ DV+
Sbjct: 230 QNLLLDPDTAVLKLCDFGSAKQLVRG--EPNVSYICSRY-YRAPELIFGATDYTSSIDVW 286
Query: 171 SFGVLLLQIISGKRL 185
S G +L +++ G+ +
Sbjct: 287 SAGCVLAELLLGQPI 301
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 189
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 190 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 230
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 231 SS----ECQHLIRWCLALRPSDRPTFEEIQN 257
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTP 223
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 186
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 187 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 227
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 228 SS----ECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 191
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 192 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 232
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 233 SS----ECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSKS--SAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 114
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 115 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 170
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 171 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
Query: 184 RL 185
L
Sbjct: 228 IL 229
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
E++AVK + + E K E++ L+H N++R + +V EY L
Sbjct: 45 ELVAVKYIERGEKID-ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL- 102
Query: 67 CYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
F+ I R D + + + G+ Y + + HRDLK N LL P
Sbjct: 103 ---FERICNAGRFSEDEAR--FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAP 154
Query: 124 --KISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQI 179
KI FG ++K S L + + VGT YI PE + Y K +DV+S GV L +
Sbjct: 155 RLKICAFG----YSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 180 ISG 182
+ G
Sbjct: 211 LVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 7 EVIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLD 66
E++AVK + + E K E++ L+H N++R + +V EY L
Sbjct: 45 ELVAVKYIERGEKID-ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL- 102
Query: 67 CYLFDPI---RRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
F+ I R D + + + G+ Y + + HRDLK N LL P
Sbjct: 103 ---FERICNAGRFSEDEAR--FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAP 154
Query: 124 --KISDFGLARIFAKES-LKANTEQVVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQI 179
KI FG ++K S L + + VGT YI PE + Y K +DV+S GV L +
Sbjct: 155 RLKICAFG----YSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 180 ISG 182
+ G
Sbjct: 211 LVG 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 190
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 191 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 231
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 232 SS----ECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 9 IAVKKLSK--SSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDS---EERMLVYEYMPNK 63
+A+KKLS+ + + E++L + H N+I +L EE VY M +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--E 103
Query: 64 SLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP 123
+D L I+ + LD ++ +++ + G+ +L IIHRDLK SNI++ D
Sbjct: 104 LMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 159
Query: 124 KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGK 183
KI DFGLAR + T VV T Y PE Y D++S G ++ +++ K
Sbjct: 160 KILDFGLARTAGTSFMM--TPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
Query: 184 RL 185
L
Sbjct: 217 IL 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDM-KPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 233
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 234 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 274
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 275 SS----ECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 191
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 192 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 232
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 233 SS----ECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 218
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 219 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 259
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 260 SS----ECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 191
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 192 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 232
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 233 SS----ECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 205
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 206 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 246
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 247 SS----ECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 206
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 207 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 247
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 248 SS----ECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 233
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 234 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 274
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 275 SS----ECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+++ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 225
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 226 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 266
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 267 SS----ECQHLIRWCLALRPSDRPTFEEIQN 293
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KISDFGLARIFAKESL 139
+ +I+ I +G+ YL + + I+H DLK NILL + P KI DFG++R K
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR---KIGH 186
Query: 140 KANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIIS 181
+++GT Y+ PE +T +D+++ G++ +++
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 25/164 (15%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL---FDPIRRLILDWKKRV 84
EV L +LQH N+I + + L++EY N L Y+ D R+I +
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF--LY 139
Query: 85 HIIEGITQGLLYLQEYSRLTIIHRDLKASNILL-----GEDMKPKISDFGLARIFAKESL 139
+I G+ +SR +HRDLK N+LL E KI DFGLAR F +
Sbjct: 140 QLINGVNFC------HSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PI 191
Query: 140 KANTEQVVGTIGYIPPEY---ARQGVYSTKSDVFSFGVLLLQII 180
+ T +++ T+ Y PPE +R YST D++S + +++
Sbjct: 192 RQFTHEII-TLWYRPPEILLGSRH--YSTSVDIWSIACIWAEML 232
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 186
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ GG+ F R
Sbjct: 187 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEI-IGGQ------VFFRQRV 227
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 228 SS----ECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPI--RRLILDWKKRVH 85
E+ L H N++ + + EE + Y+ + + L I +R+++ + +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+ I GL L E ++HRDL NILL ++ I DF LAR +++ AN
Sbjct: 139 FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTH 192
Query: 146 VVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQIISGKRL 185
V Y PE Q TK D++S G ++ ++ + K L
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 4 PCGEVIAVKK--LSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
P GE + V++ L S + + E+ ++ H N++ I E +V +M
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 62 ---NKSLDCYLF-DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
K L C F D + L + + I++G+ + L Y+ + +HR +KAS+IL+
Sbjct: 110 YGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIH---HMGYVHRSVKASHILI 161
Query: 118 GEDMKPKISDF--GLARI-----------FAKESLKANTEQVVGTIGYIPPEYARQGV-- 162
D K +S L+ I F K S+K + ++ PE +Q +
Sbjct: 162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV--------LPWLSPEVLQQNLQG 213
Query: 163 YSTKSDVFSFGVLLLQIISGK 183
Y KSD++S G+ ++ +G
Sbjct: 214 YDAKSDIYSVGITACELANGH 234
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 37/201 (18%)
Query: 4 PCGEVIAVKK--LSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMP 61
P GE + V++ L S + + E+ ++ H N++ I E +V +M
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 62 ---NKSLDCYLF-DPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL 117
K L C F D + L + + I++G+ + L Y+ + +HR +KAS+IL+
Sbjct: 94 YGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIH---HMGYVHRSVKASHILI 145
Query: 118 GEDMKPKISDF--GLARI-----------FAKESLKANTEQVVGTIGYIPPEYARQGV-- 162
D K +S L+ I F K S+K + ++ PE +Q +
Sbjct: 146 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV--------LPWLSPEVLQQNLQG 197
Query: 163 YSTKSDVFSFGVLLLQIISGK 183
Y KSD++S G+ ++ +G
Sbjct: 198 YDAKSDIYSVGITACELANGH 218
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 28 EVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPI--RRLILDWKKRVH 85
E+ L H N++ + + EE + Y+ + + L I +R+++ + +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQ 145
+ I GL L E ++HRDL NILL ++ I DF LAR +++ AN
Sbjct: 139 FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTH 192
Query: 146 VVGTIGYIPPEYARQGVYSTK-SDVFSFGVLLLQIISGKRL 185
V Y PE Q TK D++S G ++ ++ + K L
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 5 CGEVIAVKKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
+ I ++LS SS +G EE + EV + +++H N+I + + + +L+ E +
Sbjct: 34 AAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 92
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L +L + + L + ++ I G+ YL I H DLK NI+L +
Sbjct: 93 GELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNV 146
Query: 123 P----KISDFGLA-RIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
P K+ DFG+A +I A K + GT ++ PE ++D++S GV+
Sbjct: 147 PNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 202
Query: 178 QIISG 182
++SG
Sbjct: 203 ILLSG 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 58/262 (22%)
Query: 9 IAVKKLSKSSAQGFEEFKN------EVMLTAKLQ----HVNLIRVLGFCIDSEERMLVYE 58
+A+K + ++ G+ + EV L K+ H +IR+L + E MLV E
Sbjct: 59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE 118
Query: 59 YMPNKSLDCYLFDPIRRLILDWKKRVHIIEGIT-----QGLLYLQEYSRLTIIHRDLKAS 113
P + D LFD I ++ + EG + Q + +Q ++HRD+K
Sbjct: 119 -RPLPAQD--LFDYI-------TEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDE 168
Query: 114 NILLGEDMK---PKISDFGLARIFAKESLKANTEQVVGTIGYIPPEY-ARQGVYSTKSDV 169
NIL+ D++ K+ DFG + E GT Y PPE+ +R ++ + V
Sbjct: 169 NILI--DLRRGCAKLIDFGSGALLHDEPYT----DFDGTRVYSPPEWISRHQYHALPATV 222
Query: 170 FSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRNSSCKLMR 229
+S G+LL ++ G + ILE + F D C L+R
Sbjct: 223 WSLGILLYDMVCGD-----IPFERDQEILEAE---------LHFPAHVSPD---CCALIR 265
Query: 230 CLEIALLCVQENPNDRPSMLEV 251
C+ P+ RPS+ E+
Sbjct: 266 ------RCLAPKPSSRPSLEEI 281
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 19 AQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLIL 78
G K E+ L +L+H N+I+++ + E++ + YM + C + + + +
Sbjct: 47 PNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCGMQEMLDSVP- 102
Query: 79 DWKKRVHIIEG------ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLAR 132
+KR + + + GL YL I+H+D+K N+LL KIS G+A
Sbjct: 103 --EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 133 IFAKESLKANTEQVVGTIGYIPPEYAR--QGVYSTKSDVFSFGVLLLQIISG 182
+ G+ + PPE A K D++S GV L I +G
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
Y+ P Y+ D ++ GVL+ ++ +G
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 186
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 187 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 227
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 228 S----XECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 5 CGEVIAVKKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPN 62
+ I ++LS SS +G EE + EV + +++H N+I + + + +L+ E +
Sbjct: 41 AAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 99
Query: 63 KSLDCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMK 122
L +L + + L + ++ I G+ YL I H DLK NI+L +
Sbjct: 100 GELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNV 153
Query: 123 P----KISDFGLA-RIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLL 177
P K+ DFG+A +I A K + GT ++ PE ++D++S GV+
Sbjct: 154 PNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 178 QIISG 182
++SG
Sbjct: 210 ILLSG 214
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 218
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 219 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 259
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 260 SS----ECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 28/175 (16%)
Query: 26 KNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYLFDPIRRLILDWK---- 81
KNE+ + +L H LI + D E +L+ E++ LFD R D+K
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE----LFD--RIAAEDYKMSEA 149
Query: 82 KRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNIL--LGEDMKPKISDFGLARIFAKESL 139
+ ++ + +GL ++ E+S I+H D+K NI+ + KI DFGLA
Sbjct: 150 EVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA-------T 199
Query: 140 KANTEQVV----GTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISGKRLSMLCG 190
K N +++V T + PE + +D+++ GVL ++SG LS G
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG--LSPFAG 252
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 219
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 220 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 260
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 261 SS----ECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 218
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 219 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 259
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 260 SS----ECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 219
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 220 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 260
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
SS C + C+ P+DRP+ E+ +
Sbjct: 261 SS----ECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 213
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 214 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 254
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 255 S----XECQHLIRWCLALRPSDRPTFEEIQN 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 205
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 206 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 246
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 247 S----XECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 206
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 207 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 247
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 248 S----XECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 233
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 234 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 274
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 275 S----XECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ S++S +G EE + EV + ++ H N+I + + + +L+ E + L +L
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
++ L ++ I+ I G+ YL I H DLK NI+L + P K+
Sbjct: 107 ---AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 161 IDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 238
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 239 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 279
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 280 S----XECQHLIRWCLALRPSDRPTFEEIQN 306
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL-------------GEDMKPKISDFGL 130
+ ++ I G+ +L L IIHRDLK NIL+ E+++ ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 131 ARIF--AKESLKANTEQVVGTIGYIPPEYARQGVYS--TKS-DVFSFGVLLLQIIS 181
+ + + N GT G+ PE + T+S D+FS G + I+S
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL-------------GEDMKPKISDFGL 130
+ ++ I G+ +L L IIHRDLK NIL+ E+++ ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 131 ARIF--AKESLKANTEQVVGTIGYIPPEYARQGVYS--TKS-DVFSFGVLLLQIIS 181
+ + + N GT G+ PE + T+S D+FS G + I+S
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ SS +G EE + EV + +++H N+I + + + +L+ E + L +L
Sbjct: 61 KRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
+ + L + ++ I G+ YL I H DLK NI+L + P K+
Sbjct: 121 AE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 126 SDFGLA-RIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFG+A +I A K + GT ++ PE ++D++S GV+ ++SG
Sbjct: 175 IDFGIAHKIEAGNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 91 TQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTI 150
Q +L + L +I+RDLK N+L+ + +++DFG A+ +K T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 202
Query: 151 GYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+ PE Y+ D ++ GVL+ ++ +G
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 206
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ +G F R
Sbjct: 207 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIRG-------QVFFRQRV 247
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P DRP+ E+ +
Sbjct: 248 S----XECQHLIRWCLALRPXDRPTFEEIQN 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ S++S +G EE + EV + ++ H N+I + + + +L+ E + L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
++ L ++ I+ I G+ YL I H DLK NI+L + P K+
Sbjct: 107 ---AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 161 IDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ S++S +G EE + EV + ++ H N+I + + + +L+ E + L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
++ L ++ I+ I G+ YL I H DLK NI+L + P K+
Sbjct: 107 ---AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 161 IDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I + +L + +L +HRD+K N+LL + +++DFG + + + + VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 239
Query: 150 IGYIPPEYAR-----QGVYSTKSDVFSFGVLLLQIISGK 183
YI PE + G Y + D +S GV + +++ G+
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 84 VHIIEGITQGLLYLQEYSRLTIIHRDLKASNILL-------------GEDMKPKISDFGL 130
+ ++ I G+ +L L IIHRDLK NIL+ E+++ ISDFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 131 ARIF--AKESLKANTEQVVGTIGYIPPEYARQ-GVYSTKS------DVFSFGVLLLQIIS 181
+ + S + N GT G+ PE + TK D+FS G + I+S
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 102 RLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGTIGYIPPEYAR-- 159
+L +HRD+K NIL+ + +++DFG + + E + VGT YI PE +
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 160 ---QGVYSTKSDVFSFGVLLLQIISGK 183
+G Y + D +S GV + +++ G+
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ S++S +G EE + EV + ++ H N+I + + + +L+ E + L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
++ L ++ I+ I G+ YL I H DLK NI+L + P K+
Sbjct: 107 ---AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 161 IDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ S++S +G EE + EV + ++ H N+I + + + +L+ E + L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
++ L ++ I+ I G+ YL I H DLK NI+L + P K+
Sbjct: 107 ---AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 161 IDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 12 KKLSKSSAQGF--EEFKNEVMLTAKLQHVNLIRVLGFCIDSEERMLVYEYMPNKSLDCYL 69
K+ S++S +G EE + EV + ++ H N+I + + + +L+ E + L +L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 70 FDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KI 125
++ L ++ I+ I G+ YL I H DLK NI+L + P K+
Sbjct: 107 ---AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
DFGLA + + GT ++ PE ++D++S GV+ ++SG
Sbjct: 161 IDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 90 ITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKANTEQVVGT 149
I + +L + +L +HRD+K N+LL + +++DFG + + + + VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 255
Query: 150 IGYIPPEYARQ-----GVYSTKSDVFSFGVLLLQIISGK 183
YI PE + G Y + D +S GV + +++ G+
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 92 QGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKAN--TEQVVGT 149
+GL Y+ +IHRDLK SN+L+ E+ + KI DFG+AR + + V T
Sbjct: 170 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 150 IGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIISGKRL 185
Y PE Y+ D++S G + ++++ ++L
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 218
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 219 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 259
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 260 S----XECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 219
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 220 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 260
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 261 S----XECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 92 QGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKISDFGLARIFAKESLKAN--TEQVVGT 149
+GL Y+ +IHRDLK SN+L+ E+ + KI DFG+AR + + V T
Sbjct: 169 RGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 150 IGYIPPEYARQ-GVYSTKSDVFSFGVLLLQIISGKRL 185
Y PE Y+ D++S G + ++++ ++L
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 29/151 (19%)
Query: 105 IIHRDLKASNILLGEDMKP-KISDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVY 163
++HRD+K NIL+ + K+ DFG + K+++ + + GT Y PPE+ R Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFD---GTRVYSPPEWIRYHRY 219
Query: 164 STKS-DVFSFGVLLLQIISGKRLSMLCGINENLSILEHAYELWKGGKGMEFVDSFLDDRN 222
+S V+S G+LL M+CG EH E+ G F R
Sbjct: 220 HGRSAAVWSLGILL--------YDMVCGDIP----FEHDEEIIGG-------QVFFRQRV 260
Query: 223 SSCKLMRCLEIALLCVQENPNDRPSMLEVSS 253
S C + C+ P+DRP+ E+ +
Sbjct: 261 S----XECQHLIRWCLALRPSDRPTFEEIQN 287
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 14/179 (7%)
Query: 8 VIAVKKLSKSSAQGFEEFKNEVMLTAKLQHVNLIRVLGFC--IDSEERMLVYEYMPNKSL 65
V+ V K+ S + +F E H N++ VLG C + L+ +MP SL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL 96
Query: 66 DCYLFDPIRRLILDWKKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKPKI 125
L + ++D + V + +G+ +L L H L + ++++ EDM +I
Sbjct: 97 YNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNSRSVMIDEDMTARI 154
Query: 126 SDFGLARIFAKESLKANTEQVVGTIGYIPPEYARQGVYSTK---SDVFSFGVLLLQIIS 181
S A + + ++ PE ++ T +D++SF VLL ++++
Sbjct: 155 S-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KISDFGLARIFAKESLKA 141
I++ I + + YL + I HRD+K N+L +P K++DFG FAKE+
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFG----FAKETTSH 171
Query: 142 NT-EQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
N+ + T Y+ PE Y D++S GV++ ++ G
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG---EDMKPKISDFGLARIFAKE 137
++ I+ I + +L ++ I HRD+K N+L +D K++DFG FAKE
Sbjct: 109 REAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFG----FAKE 161
Query: 138 SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+ + + T Y+ PE Y D++S GV++ ++ G
Sbjct: 162 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 81 KKRVHIIEGITQGLLYLQEYSRLTIIHRDLKASNILLG---EDMKPKISDFGLARIFAKE 137
++ I+ I + +L ++ I HRD+K N+L +D K++DFG FAKE
Sbjct: 128 REAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFG----FAKE 180
Query: 138 SLKANTEQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
+ + + T Y+ PE Y D++S GV++ ++ G
Sbjct: 181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 86 IIEGITQGLLYLQEYSRLTIIHRDLKASNILLGEDMKP----KISDFGLARIFAKESLKA 141
I++ I + + YL + I HRD+K N LL +P K++DFG FAKE+
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPEN-LLYTSKRPNAILKLTDFG----FAKETTSH 172
Query: 142 NT-EQVVGTIGYIPPEYARQGVYSTKSDVFSFGVLLLQIISG 182
N+ T Y+ PE Y D++S GV++ ++ G
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,855,826
Number of Sequences: 62578
Number of extensions: 299536
Number of successful extensions: 2874
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 755
Number of HSP's gapped (non-prelim): 1123
length of query: 303
length of database: 14,973,337
effective HSP length: 98
effective length of query: 205
effective length of database: 8,840,693
effective search space: 1812342065
effective search space used: 1812342065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)