BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045453
(346 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 167/300 (55%), Gaps = 13/300 (4%)
Query: 44 IRGFTIRELEIATNNFDARNVIKDGYAYKFYKGFVEDRT-VSVMKFNDILNDGHEDCFNN 102
++ F++REL++A++NF +N++ G K YKG + D T V+V + + G E F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 103 IIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI 162
+ ++ H+N+L+L G C+ ++V+ + N ++A + + PL +R RI
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A+ A +AYLH I+HR ++ + I LDE + A + DF L+ + + V V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR---GDEIGAGHYWLLHY 279
GT+G +APEY++TG +EK DVF +G++LL L+TGQ+ FD +R D++ LL +
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV-----MLLDW 259
Query: 280 VKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLK 339
VK ++ + + +VD + K+++++ ++AL+C S +RP +V + L+
Sbjct: 260 VKGLLKEKKLEALVDVDLQGN----YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 165/300 (55%), Gaps = 13/300 (4%)
Query: 44 IRGFTIRELEIATNNFDARNVIKDGYAYKFYKGFVED-RTVSVMKFNDILNDGHEDCFNN 102
++ F++REL++A++NF +N++ G K YKG + D V+V + + G E F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 103 IIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI 162
+ ++ H+N+L+L G C+ ++V+ + N ++A + + PL +R RI
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A+ A +AYLH I+HR ++ + I LDE + A + DF L+ + + V V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR---GDEIGAGHYWLLHY 279
G +G +APEY++TG +EK DVF +G++LL L+TGQ+ FD +R D++ LL +
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV-----MLLDW 251
Query: 280 VKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLK 339
VK ++ + + +VD + K+++++ ++AL+C S +RP +V + L+
Sbjct: 252 VKGLLKEKKLEALVDVDLQGN----YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 12/290 (4%)
Query: 51 ELEIATNNFDARNVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLS 110
+LE ATNNFD + +I G K YKG + D +K + + F I
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H +++ L G C E +++++ ++N L H+Y + + QRL I + A +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE-GETCVKDKVTGTMGFLA 229
YLH +R I+HR ++ I LDE ++ K+ DF +S E G+T + V GT+G++
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEF 289
PEY G EK DV+SFG++L +L + S E+ W + + N +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV----ESHNNGQL 265
Query: 290 DEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLK 339
++IVDP + + + + L+ F + A+ C+ S+EDRP+ DV +L+
Sbjct: 266 EQIVDPNLADK----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 12/290 (4%)
Query: 51 ELEIATNNFDARNVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLS 110
+LE ATNNFD + +I G K YKG + D +K + + F I
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H +++ L G C E +++++ ++N L H+Y + + QRL I + A +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE-GETCVKDKVTGTMGFLA 229
YLH +R I+HR ++ I LDE ++ K+ DF +S E +T + V GT+G++
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEF 289
PEY G EK DV+SFG++L +L + S E+ W + + N +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV----ESHNNGQL 265
Query: 290 DEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLK 339
++IVDP + + + + L+ F + A+ C+ S+EDRP+ DV +L+
Sbjct: 266 EQIVDPNLADK----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 19/231 (8%)
Query: 47 FTIRELEIATNNFDAR------NVIKDGYAYKFYKGFVEDRTVSVMKFN---DILNDGHE 97
F+ EL+ TNNFD R N + +G YKG+V + TV+V K DI + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI--YQNQPHFEPLL 155
F+ I H+N+++L G + +V+ + N +L D + P PL
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---PLS 131
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE-GE 214
R +IA AN I +LH +HR I+ + I LDE + AK+ DF L+ + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 215 TCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
T + ++ GT ++APE + G+ K D++SFG++LL ++TG D R
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 19/231 (8%)
Query: 47 FTIRELEIATNNFDAR------NVIKDGYAYKFYKGFVEDRTVSVMKFN---DILNDGHE 97
F+ EL+ TNNFD R N + +G YKG+V + TV+V K DI + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI--YQNQPHFEPLL 155
F+ I H+N+++L G + +V+ + N +L D + P PL
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---PLS 131
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE-GE 214
R +IA AN I +LH +HR I+ + I LDE + AK+ DF L+ + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 215 TCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
T + ++ GT ++APE + G+ K D++SFG++LL ++TG D R
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 47 FTIRELEIATNNFDAR------NVIKDGYAYKFYKGFVEDRTVSVMKFN---DILNDGHE 97
F+ EL+ TNNFD R N + +G YKG+V + TV+V K DI + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI--YQNQPHFEPLL 155
F+ I H+N+++L G + +V+ + N +L D + P PL
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---PLS 125
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE-GE 214
R +IA AN I +LH +HR I+ + I LDE + AK+ DF L+ + + +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 215 TCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
+ ++ GT ++APE + G+ K D++SFG++LL ++TG D R
Sbjct: 183 XVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 47 FTIRELEIATNNFDAR------NVIKDGYAYKFYKGFVEDRTVSVMKFN---DILNDGHE 97
F+ EL+ TNNFD R N +G YKG+V + TV+V K DI + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI--YQNQPHFEPLL 155
F+ I H+N+++L G + +V+ N +L D + P PL
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP---PLS 122
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE-GE 214
R +IA AN I +LH +HR I+ + I LDE + AK+ DF L+ + + +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 215 TCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
++ GT + APE + G+ K D++SFG++LL ++TG D R
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 111 SHKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
+H N++KL G CL PV +V E + +L + ++ +P + + + +
Sbjct: 59 NHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQG 114
Query: 170 IAYLHIGFSRPILHRKIRPSRIFL-DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
+AYLH + ++HR ++P + L G + K+ DF + I T K G+ ++
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWM 170
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHY---WLLH 278
APE +++EKCDVFS+G++L ++T +K F DEIG + W +H
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPF-----DEIGGPAFRIMWAVH 218
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 111 SHKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
+H N++KL G CL PV +V E + +L + ++ +P + + + +
Sbjct: 60 NHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQG 115
Query: 170 IAYLHIGFSRPILHRKIRPSRIFL-DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
+AYLH + ++HR ++P + L G + K+ DF + I T K G+ ++
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK----GSAAWM 171
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHY---WLLH 278
APE +++EKCDVFS+G++L ++T +K F DEIG + W +H
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPF-----DEIGGPAFRIMWAVH 219
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 99/191 (51%), Gaps = 15/191 (7%)
Query: 74 YKG-FVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF 132
YKG + D V ++K D + + F N + + + H N+L G + + IV
Sbjct: 53 YKGKWHGDVAVKILKVVDPTPEQFQ-AFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVT 110
Query: 133 ESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF 192
+ + +L H++ + F+ + Q + IA A + YLH ++ I+HR ++ + IF
Sbjct: 111 QWCEGSSLYKHLHVQETKFQ---MFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIF 164
Query: 193 LDEGYIAKLFDFSLSV--SIPEGETCVKDKVTGTMGFLAPEYINTGD---FNEKCDVFSF 247
L EG K+ DF L+ S G V ++ TG++ ++APE I D F+ + DV+S+
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQQV-EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSY 223
Query: 248 GMLLLVLLTGQ 258
G++L L+TG+
Sbjct: 224 GIVLYELMTGE 234
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ ++ FE + +
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFE---MKK 121
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 122 LIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G ++ IV + + +L H++ ++ FE + +
Sbjct: 66 AFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETKFE---MKK 121
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 122 LIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 33/228 (14%)
Query: 54 IATNNFDARNVIKDGYAYKFYKG-FVEDRTVSVMKFNDILNDGHEDC--------FNNII 104
+A N + I G +KG V+D++V +K + IL D + F +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK-SLILGDSEGETEMIEKFQEFQREV 74
Query: 105 FASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV 164
F +H N++KL G L P +V E V L H ++ H P+ S +LR+ +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY-HRLLDKAH--PIKWSVKLRLML 129
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEG--YIAKLFDFSLSVSIPEGETCVKD 219
IA I Y+ + PI+HR +R IFL DE AK+ DFSLS + V
Sbjct: 130 DIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS------QQSVHS 182
Query: 220 KVTGTMG---FLAPEYINTGD--FNEKCDVFSFGMLLLVLLTGQKIFD 262
V+G +G ++APE I + + EK D +SF M+L +LTG+ FD
Sbjct: 183 -VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ ++ FE + +
Sbjct: 54 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFE---MKK 109
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 110 LIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ 166
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 167 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHF--EPLL 155
DC I +L+ H NV+K +E IV E L+ I HF + L
Sbjct: 78 DCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMI----KHFKKQKRL 132
Query: 156 LSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEG 213
+ +R + V + +A+ ++H SR ++HR I+P+ +F+ + KL D L
Sbjct: 133 IPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF-SS 188
Query: 214 ETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGH 273
+T + GT +++PE I+ +N K D++S G LL + Q P GD++
Sbjct: 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ---SPFYGDKMNL-- 243
Query: 274 YWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTV- 332
Y L +++C + P + + + R+L MC+ E RP
Sbjct: 244 YSLCKKIEQC----------------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTY 287
Query: 333 --DVAKRL 338
DVAKR+
Sbjct: 288 VYDVAKRM 295
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 119
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Query: 100 FNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR 159
F + S SH+N++ + E +V E ++ TL+++I + P L +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTA 113
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD 219
+ I + I + H I+HR I+P I +D K+FDF ++ ++ E +
Sbjct: 114 INFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 220 KVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGH 273
V GT+ + +PE +E D++S G++L +L G+ F+ I H
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 224
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 64 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 120
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 119
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 119
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 71 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 127
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 65 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 121
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 69 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 125
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 182
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 108/228 (47%), Gaps = 33/228 (14%)
Query: 54 IATNNFDARNVIKDGYAYKFYKG-FVEDRTVSVMKFNDILNDGHEDC--------FNNII 104
+A N + I G +KG V+D++V +K + IL D + F +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK-SLILGDSEGETEMIEKFQEFQREV 74
Query: 105 FASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV 164
F +H N++KL G L P +V E V L H ++ H P+ S +LR+ +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY-HRLLDKAH--PIKWSVKLRLML 129
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEG--YIAKLFDFSLSVSIPEGETCVKD 219
IA I Y+ + PI+HR +R IFL DE AK+ DF LS + V
Sbjct: 130 DIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------QQSVHS 182
Query: 220 KVTGTMG---FLAPEYINTGD--FNEKCDVFSFGMLLLVLLTGQKIFD 262
V+G +G ++APE I + + EK D +SF M+L +LTG+ FD
Sbjct: 183 -VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 72 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 128
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 58 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 114
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 119
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 52 LEIATNNFDARNVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSS 111
LEI +I G K Y+ F V+V ++ N+ +KL +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 112 ---HKNVLKLTGCCLETRIPVIVFESVK----NRTLADHIYQNQPHFEPLLLSQRLRIAV 164
H N++ L G CL+ +V E + NR L+ P +L + AV
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK------RIPPDIL---VNWAV 112
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDE--------GYIAKLFDFSLSVSIPEGETC 216
IA + YLH PI+HR ++ S I + + I K+ DF L+ E
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRT 169
Query: 217 VKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
K G ++APE I F++ DV+S+G+LL LLTG+ F
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 69 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 125
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 59 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 115
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 172
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 68 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 124
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 78 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 134
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 135 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 190
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H+ +++L + I I+ E ++N +L D + P L +++ L +A IA
Sbjct: 73 KQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 129
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A++ R +HR +R + I + + K+ DF L+ I + E ++ + +
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
APE IN G F K DV+SFG+LL ++T +I P
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 70 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 126
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 127 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 182
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 183 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H +++L I+ E + +L D + ++ +LL + + + IA
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGG--KVLLPKLIDFSAQIA 120
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+AY+ + +HR +R + + + E + K+ DF L+ I + E ++ + +
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 177
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR--GDEIGA-GHYWLLHYVKKCI 284
APE IN G F K DV+SFG+LL ++T KI P R D + A + + V+ C
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCP 237
Query: 285 ENNEFDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPT 330
DE+ D + MC E AE+RPT
Sbjct: 238 -----DELYD---------------------IMKMCWKEKAEERPT 257
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 50 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 106
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 107 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 162
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 78 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 134
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 135 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 77 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 133
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 134 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 190 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ G + IV E + +L ++++ E L +RL +A +A +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMN 151
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK-VTGTMGFLAP 230
YLH + PI+HR ++ + +D+ Y K+ DF LS + T + K GT ++AP
Sbjct: 152 YLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAP 208
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
E + NEK DV+SFG++L L T Q+ +
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 50 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 106
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 107 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 55 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 111
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 112 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 55 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 111
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 112 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G + ++ IV + + +L H++ + FE + L
Sbjct: 52 AFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 108
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 109 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 165 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 108 KLSSHKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHI 166
K H ++KL T+ P+ I+ E + +L D + ++ +PL + + + I
Sbjct: 238 KTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQI 293
Query: 167 ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG 226
A +A++ R +HR +R + I + + K+ DF L+ I + E ++ +
Sbjct: 294 AEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
+ APE IN G F K DV+SFG+LL+ ++T +I P
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 387
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 108 KLSSHKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHI 166
K H ++KL T+ P+ I+ E + +L D + ++ +PL + + + I
Sbjct: 65 KTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQI 120
Query: 167 ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG 226
A +A++ R +HR +R + I + + K+ DF L+ I + E ++ +
Sbjct: 121 AEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
+ APE IN G F K DV+SFG+LL+ ++T +I P
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 214
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ G + IV E + +L ++++ E L +RL +A +A +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMN 151
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YLH + PI+HR ++ + +D+ Y K+ DF LS + GT ++APE
Sbjct: 152 YLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXFLXSKXAAGTPEWMAPE 209
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ NEK DV+SFG++L L T Q+ +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 54 IATNNFDARNVIKDGYAYKFYKG-FVEDRTVSVMKFNDILNDGHEDC--------FNNII 104
+A N + I G +KG V+D++V +K + IL D + F +
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK-SLILGDSEGETEMIEKFQEFQREV 74
Query: 105 FASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV 164
F +H N++KL G L P +V E V L H ++ H P+ S +LR+ +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY-HRLLDKAH--PIKWSVKLRLML 129
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEG--YIAKLFDFSLSVSIPEGETCVKD 219
IA I Y+ + PI+HR +R IFL DE AK+ DF S + V
Sbjct: 130 DIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS------QQSVHS 182
Query: 220 KVTGTMG---FLAPEYINTGD--FNEKCDVFSFGMLLLVLLTGQKIFD 262
V+G +G ++APE I + + EK D +SF M+L +LTG+ FD
Sbjct: 183 -VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 99 CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
F N + + + H N+L G ++ IV + + +L H++ + FE + L
Sbjct: 50 AFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-- 106
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK 218
+ IA A + YLH ++ I+HR ++ + IFL E K+ DF L+ +
Sbjct: 107 -IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 219 -DKVTGTMGFLAPEYINTGDFNE---KCDVFSFGMLLLVLLTGQ 258
++++G++ ++APE I D N + DV++FG++L L+TGQ
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 112 HKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H++++K GCC + + +V E V +L D++ ++ + L+Q L A I
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEG 129
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC--VKDKVTGTMGF 227
+AYLH S+ +HR + + LD + K+ DF L+ ++PEG V++ + +
Sbjct: 130 MAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 33/207 (15%)
Query: 72 KFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIV 131
+F KG D ++ KF HE+ +N I L H N++KL V
Sbjct: 73 QFDKGRYSDDNKNIEKF-------HEEIYNEISLLKSLD-HPNIIKLFD----------V 114
Query: 132 FESVKNRTLADHIYQNQPHFEPLLLSQRL------RIAVHIANAIAYLHIGFSRPILHRK 185
FE K L Y+ FE ++ + I I + I YLH I+HR
Sbjct: 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRD 171
Query: 186 IRPSRIFLDEGYIA---KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKC 242
I+P I L+ K+ DF LS S + ++D++ GT ++APE + +NEKC
Sbjct: 172 IKPENILLENKNSLLNIKIVDFGLS-SFFSKDYKLRDRL-GTAYYIAPEVLKK-KYNEKC 228
Query: 243 DVFSFGMLLLVLLTGQKIFDPSRGDEI 269
DV+S G+++ +LL G F +I
Sbjct: 229 DVWSCGVIMYILLCGYPPFGGQNDQDI 255
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K H +++L + I+ E + +L D + ++ +LL + + + IA
Sbjct: 62 KTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGG--KVLLPKLIDFSAQIA 119
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+AY+ + +HR +R + + + E + K+ DF L+ I + E ++ + +
Sbjct: 120 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 176
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR--GDEIGAGHYWLLHYVKKCIE 285
APE IN G F K +V+SFG+LL ++T KI P R D + A
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSA-------------- 222
Query: 286 NNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPT 330
+S+G R+ + E ++ MC E AE+RPT
Sbjct: 223 ------------LSQGYRMPRMENCPDELYDIMKMCWKEKAEERPT 256
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 112 HKNVLKLTGCCLETRIPVI--VFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H++++K GCC + + V E V +L D++ ++ + L+Q L A I
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEG 146
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC--VKDKVTGTMGF 227
+AYLH ++ +HR + + LD + K+ DF L+ ++PEG V++ + +
Sbjct: 147 MAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 112 HKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H++++K GCC + + +V E V +L D++ ++ + L+Q L A I
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEG 129
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC--VKDKVTGTMGF 227
+AYLH ++ +HR + + LD + K+ DF L+ ++PEG V++ + +
Sbjct: 130 MAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 127 IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
+P IV E V TL D ++ P ++ + I V IA+A L+ I+HR +
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIHRDV 142
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD--KVTGTMGFLAPEYINTGDFNEKCDV 244
+P+ I + K+ DF ++ +I + V V GT +L+PE + + DV
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 245 FSFGMLLLVLLTGQKIFDPSRGDEIGAGH 273
+S G +L +LTG+ F D + H
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPDSVAYQH 231
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 140 LADHIYQNQPHFEPLLLSQRL------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y F+ ++ +R RI + + I Y+H I+HR ++P + L
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 159
Query: 194 D---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + ++ DF LS E +KDK+ GT ++APE ++ G ++EKCDV+S G++
Sbjct: 160 ESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVI 216
Query: 251 LLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
L +LL+G F+ GA Y +L V+K
Sbjct: 217 LYILLSGCPPFN-------GANEYDILKKVEK 241
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 121 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 174
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 175 DFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 232
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 233 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 270
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 271 KCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 45 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 103
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 104 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 140 LADHIYQNQPHFEPLLLSQRL------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y F+ ++ +R RI + + I Y+H I+HR ++P + L
Sbjct: 126 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 182
Query: 194 D---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + ++ DF LS E +KDK+ GT ++APE ++ G ++EKCDV+S G++
Sbjct: 183 ESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVI 239
Query: 251 LLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
L +LL+G F+ GA Y +L V+K
Sbjct: 240 LYILLSGCPPFN-------GANEYDILKKVEK 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 140 LADHIYQNQPHFEPLLLSQRL------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y F+ ++ +R RI + + I Y+H I+HR ++P + L
Sbjct: 127 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 183
Query: 194 D---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + ++ DF LS E +KDK+ GT ++APE ++ G ++EKCDV+S G++
Sbjct: 184 ESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVI 240
Query: 251 LLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
L +LL+G F+ GA Y +L V+K
Sbjct: 241 LYILLSGCPPFN-------GANEYDILKKVEK 265
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 80 DRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRT 139
+R + ++K + + + + + K H N++KL FE +N
Sbjct: 48 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE----------FFEDKRNYY 97
Query: 140 LADHIYQNQPHFEPLLLSQRLR------IAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y+ F+ ++L Q+ I + + YLH I+HR ++P + L
Sbjct: 98 LVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLL 154
Query: 194 DE---GYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + K+ DF LS G +K+++ GT ++APE + ++EKCDV+S G++
Sbjct: 155 ESKSRDALIKIVDFGLSAHFEVGGK-MKERL-GTAYYIAPEVLRK-KYDEKCDVWSCGVI 211
Query: 251 LLVLLTGQKIFDPSRGDEI 269
L +LL G F EI
Sbjct: 212 LYILLCGYPPFGGQTDQEI 230
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 112 HKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H++++K GCC + + +V E V +L D++ ++ + L+Q L A I
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-----CVGLAQLLLFAQQICEG 124
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC--VKDKVTGTMGF 227
+AYLH ++ +HR + + LD + K+ DF L+ ++PEG V++ + +
Sbjct: 125 MAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 181
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 182 YAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 117 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 170
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 171 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 228
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 229 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 266
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 267 KCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 112 HKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H++++K GCC + + +V E V +L D++ ++ + L+Q L A I
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-----CVGLAQLLLFAQQICEG 123
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC--VKDKVTGTMGF 227
+AYLH ++ +HR + + LD + K+ DF L+ ++PEG V++ + +
Sbjct: 124 MAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 180
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 181 YAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 119 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 172
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 173 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 230
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 231 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 268
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 269 KCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 114 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 167
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 168 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 225
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 226 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 263
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 264 KCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 121 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 174
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 175 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 232
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 233 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 270
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 271 KCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 120 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 173
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 174 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 231
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 232 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 269
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 270 KCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 122 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 176 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 233
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 234 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 271
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 122 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 176 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 233
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 234 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 271
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 140 LADHIYQNQPHFEPLLLSQRL------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y F+ ++ +R RI + + I Y+H I+HR ++P + L
Sbjct: 109 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLL 165
Query: 194 D---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + ++ DF LS E +KDK+ GT ++APE ++ G ++EKCDV+S G++
Sbjct: 166 ESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVI 222
Query: 251 LLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
L +LL+G F+ GA Y +L V+K
Sbjct: 223 LYILLSGCPPFN-------GANEYDILKKVEK 247
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I +K+ +H+NV+K G E I + E L D I + EP
Sbjct: 46 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 104
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 105 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
KL H N++KL + R +V E K L D I E I +
Sbjct: 91 KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV----DAAVIIKQVL 146
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ + YLH I+HR ++P + L+ + + K+ DF LS ++ E + +K+++ GT
Sbjct: 147 SGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKERL-GT 201
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
++APE + ++EKCDV+S G++L +LL G F EI
Sbjct: 202 AYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI 245
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL ++ IV E L D I + + E RI + + I
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE----HDAARIIKQVFSGIT 135
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA---KLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y+H I+HR ++P I L+ K+ DF LS + T +KD++ GT ++
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYI 190
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE + G ++EKCDV+S G++L +LL+G F
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 161 RIAVHI---ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV 217
R A +I ANA++Y H S+ ++HR I+P + L K+ DF SV P +
Sbjct: 135 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSR 188
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+D + GT+ +L PE I +EK D++S G+L L G+ F+
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL ++ IV E L D I + + E RI + + I
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE----HDAARIIKQVFSGIT 135
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYI---AKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y+H I+HR ++P I L+ K+ DF LS + T +KD++ GT ++
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYI 190
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE + G ++EKCDV+S G++L +LL+G F
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 140 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 193
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 194 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 251
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 252 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 289
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 290 KCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 74 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET--CVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 233
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 234 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + YL S+ +HR + LDE + K+
Sbjct: 141 FI-RNETH-NPTV-KDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVA 194
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 195 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 252
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 253 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 290
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 291 KCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL ++ IV E L D I + + E RI + + I
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE----HDAARIIKQVFSGIT 135
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYI---AKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y+H I+HR ++P I L+ K+ DF LS + T +KD++ GT ++
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYI 190
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE + G ++EKCDV+S G++L +LL+G F
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 70 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE--TCVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 229
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 230 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 80 DRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRT 139
+R + ++K + + + + + K H N++KL FE +N
Sbjct: 31 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE----------FFEDKRNYY 80
Query: 140 LADHIYQNQPHFEPLLLSQRLR------IAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y+ F+ ++L Q+ I + + YLH I+HR ++P + L
Sbjct: 81 LVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLL 137
Query: 194 DE---GYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + K+ DF LS G +K+++ GT ++APE + ++EKCDV+S G++
Sbjct: 138 ESKSRDALIKIVDFGLSAHFEVGGK-MKERL-GTAYYIAPEVLRK-KYDEKCDVWSCGVI 194
Query: 251 LLVLLTGQKIFDPSRGDEI 269
L +LL G F EI
Sbjct: 195 LYILLCGYPPFGGQTDQEI 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NVLK G + + + E +K TL I + SQR+ A IA+ +A
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMA 122
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS------VSIPEGETCVKDK----- 220
YLH S I+HR + + E + DF L+ + PEG +K
Sbjct: 123 YLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 221 --VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
V G ++APE IN ++EK DVFSFG++L ++ G+ DP
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADP 223
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 70 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET--CVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 229
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 230 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 70 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET--CVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 126 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 229
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 230 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 263
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 80 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 135
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE--TCVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 136 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 239
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 240 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 127 IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
+P IV E V TL D ++ P ++ + I V IA+A L+ I+HR +
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIHRDV 159
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD--KVTGTMGFLAPEYINTGDFNEKCDV 244
+P+ I + K+ DF ++ +I + V V GT +L+PE + + DV
Sbjct: 160 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 245 FSFGMLLLVLLTGQKIF 261
+S G +L +LTG+ F
Sbjct: 220 YSLGCVLYEVLTGEPPF 236
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + +D + GT+
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDTLCGTL 171
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 127 IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
+P IV E V TL D ++ P ++ + I V IA+A L+ I+HR +
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIHRDV 142
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD--KVTGTMGFLAPEYINTGDFNEKCDV 244
+P+ I + K+ DF ++ +I + V V GT +L+PE + + DV
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 245 FSFGMLLLVLLTGQKIF 261
+S G +L +LTG+ F
Sbjct: 203 YSLGCVLYEVLTGEPPF 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 74 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET--CVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 130 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 233
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 234 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 267
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+N+++L G L + ++ E +L D + ++Q HF LL R AV +A +
Sbjct: 80 HRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHF---LLGTLSRYAVQVAEGMG 135
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET--CVKDKVTGTMGFLA 229
YL S+ +HR + + L + K+ DF L ++P+ + +++ + A
Sbjct: 136 YLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
PE + T F+ D + FG+ L + T GQ+ + IG +LH + K
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-------IGLNGSQILHKIDK------ 239
Query: 289 FDEIVDPIIVSEGPRVGK-EKQLQGFRELALMCVCESAEDRPTTV 332
EG R+ + E Q + + C EDRPT V
Sbjct: 240 -----------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 127 IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
+P IV E V TL D ++ P ++ + I V IA+A L+ I+HR +
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIHRDV 142
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD--KVTGTMGFLAPEYINTGDFNEKCDV 244
+P+ I + K+ DF ++ +I + V V GT +L+PE + + DV
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 245 FSFGMLLLVLLTGQKIF 261
+S G +L +LTG+ F
Sbjct: 203 YSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 127 IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
+P IV E V TL D ++ P ++ + I V IA+A L+ I+HR +
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIHRDV 142
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD--KVTGTMGFLAPEYINTGDFNEKCDV 244
+P+ I + K+ DF ++ +I + V V GT +L+PE + + DV
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 245 FSFGMLLLVLLTGQKIF 261
+S G +L +LTG+ F
Sbjct: 203 YSLGCVLYEVLTGEPPF 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 127 IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
+P IV E V TL D ++ P ++ + I V IA+A L+ I+HR +
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIHRDV 142
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD--KVTGTMGFLAPEYINTGDFNEKCDV 244
+P+ I + K+ DF ++ +I + V V GT +L+PE + + DV
Sbjct: 143 KPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 245 FSFGMLLLVLLTGQKIF 261
+S G +L +LTG+ F
Sbjct: 203 YSLGCVLYEVLTGEPPF 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + +D + GT+
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTL 173
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 140 LADHIYQNQPHFEPLLLSQRL------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
L +Y F+ ++ +R RI + + I Y H I+HR ++P + L
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLL 159
Query: 194 D---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
+ + ++ DF LS E KDK+ GT ++APE ++ G ++EKCDV+S G++
Sbjct: 160 ESKSKDANIRIIDFGLSTHF-EASKKXKDKI-GTAYYIAPEVLH-GTYDEKCDVWSTGVI 216
Query: 251 LLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
L +LL+G F+ GA Y +L V+K
Sbjct: 217 LYILLSGCPPFN-------GANEYDILKKVEK 241
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 98 DCFNNI---IFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
DC NI I + + +H+NV+K G E I + E L D I + EP
Sbjct: 47 DCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP- 105
Query: 155 LLSQRLRIAVHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-E 212
R + + YLH IG I HR I+P + LDE K+ DF L+
Sbjct: 106 ---DAQRFFHQLMAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ +K+ GT+ ++APE + +F+ E DV+S G++L +L G+ +D
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV-HIANAI 170
H N+L+L G + ++ E T+ + Q F+ QR + +ANA+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFD----EQRTATYITELANAL 125
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
+Y H S+ ++HR I+P + L K+ DF SV P + +D + GT+ +L P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRDTLCGTLDYLPP 179
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
E I +EK D++S G+L L G F+
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 120 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 173
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 174 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 231
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 232 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 269
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 270 KCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 175
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 122 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 176 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 233
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 234 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 271
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 123 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 176
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 177 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 234
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 235 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 272
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 273 KCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 122 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 176 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 233
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 234 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 271
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 272 KCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 62 HEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMA 118
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 119 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 123 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 176
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 177 DFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 234
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 235 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 272
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 273 KCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + ++ GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 127 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 180
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 181 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 238
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGK-EKQLQGFRELAL 318
GA Y + N FD V + +G R+ + E E+ L
Sbjct: 239 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 276
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 277 KCWHPKAEMRPSFSELVSRISAIFS 301
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGTL 175
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Query: 84 SVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETR-IPVIVFESVKNRTLAD 142
+V N I + G F K SH NVL L G CL + P++V +K+ L +
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 143 HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLF 202
I +N+ H P + + + +A + +L S+ +HR + LDE + K+
Sbjct: 181 FI-RNETH-NPTV-KDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVA 234
Query: 203 DFSLSVSIPEGETCVKDKVTGT---MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
DF L+ + + E TG + ++A E + T F K DV+SFG+LL L+T
Sbjct: 235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR-- 292
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPR-VGKEKQLQGFRELAL 318
GA Y + N FD V + +G R + E E+ L
Sbjct: 293 ----------GAPPY---------PDVNTFDITV---YLLQGRRLLQPEYCPDPLYEVML 330
Query: 319 MCVCESAEDRPTTVDVAKRLKQIYQ 343
C AE RP+ ++ R+ I+
Sbjct: 331 KCWHPKAEMRPSFSELVSRISAIFS 355
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 161 RIAVHI---ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV 217
R A +I ANA++Y H S+ ++HR I+P + L K+ DF SV P +
Sbjct: 126 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSR 179
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+ + GT+ +L PE I +EK D++S G+L L G+ F+
Sbjct: 180 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 161 RIAVHI---ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV 217
R A +I ANA++Y H S+ ++HR I+P + L K+ DF SV P +
Sbjct: 135 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSR 188
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+ + GT+ +L PE I +EK D++S G+L L G+ F+
Sbjct: 189 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 63 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 119
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 120 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 175
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 238 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMA 294
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
G F K DV+SFG+LL L T ++ P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 238 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMA 294
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
G F K DV+SFG+LL L T ++ P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 61 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 117
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 118 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV-HIANAI 170
H N+L+L G ++ ++ E T+ + Q F+ QR + +ANA+
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFD----EQRTATYITELANAL 121
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
+Y H S+ ++HR I+P + L K+ DF SV P + GT+ +L P
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA---LCGTLDYLPP 175
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
E I +EK D++S G+L L G+ F+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 65 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMA 121
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 122 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 173
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 175
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTL 172
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A + A+ YLH S+ I++R ++P I LD+ K+ DF + +P+ V +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLC 164
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT ++APE ++T +N+ D +SFG+L+ +L G F
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 171
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 175
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 238 HEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMA 294
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
G F K DV+SFG+LL L T ++ P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD 219
L + I + Y+H S+ ++HR ++PS IFL + K+ DF L S+ +
Sbjct: 139 LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS 195
Query: 220 KVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLL 255
K GT+ +++PE I++ D+ ++ D+++ G++L LL
Sbjct: 196 K--GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTL 173
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 239 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 295
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L I + E + + + APE
Sbjct: 296 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L E +VF+ V L + I + + E + I +IA
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIA 119
Query: 172 YLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y H S I+HR ++P + L +G KL DF L++ + + E GT G+L
Sbjct: 120 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 174
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+PE + +++ D+++ G++L +LL G F
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 173
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 321 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY--LRLPQLVDMAAQIASGMA 377
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 378 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
G F K DV+SFG+LL L T ++ P
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYP 466
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 116 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 169
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTL 173
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 174
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L E +VF+ V L + I + + E + I +IA
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIA 119
Query: 172 YLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y H S I+HR ++P + L +G KL DF L++ + + E GT G+L
Sbjct: 120 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 174
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+PE + +++ D+++ G++L +LL G F
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 114 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 167
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 97 EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLL 156
E + K+S H N+++L +VF+ +K L D++ E + L
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT------EKVTL 108
Query: 157 SQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
S++ +I + I LH I+HR ++P I LD+ KL DF S + GE
Sbjct: 109 SEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
Query: 215 TCVKDKVTGTMGFLAPEYI------NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+V GT +LAPE I N + ++ D++S G+++ LL G F
Sbjct: 166 KL--REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L E +VF+ V L + I + + E + I +IA
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIA 118
Query: 172 YLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y H S I+HR ++P + L +G KL DF L++ + + E GT G+L
Sbjct: 119 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 173
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+PE + +++ D+++ G++L +LL G F
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTL 170
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 97 EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLL 156
E + K+S H N+++L +VF+ +K L D++ E + L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT------EKVTL 121
Query: 157 SQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
S++ +I + I LH I+HR ++P I LD+ KL DF S + GE
Sbjct: 122 SEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 215 TCVKDKVTGTMGFLAPEYI------NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+V GT +LAPE I N + ++ D++S G+++ LL G F
Sbjct: 179 KL--REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 161 RIAVHI---ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV 217
R A +I ANA++Y H S+ ++HR I+P + L K+ DF S P +
Sbjct: 110 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSR 163
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+ ++GT+ +L PE I +EK D++S G+L L G+ F+
Sbjct: 164 RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + ++ IA+ +A
Sbjct: 69 HEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKY--LRLPQLVDMSAQIASGMA 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 126 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLAD-----HIYQNQ 148
D H D + KL H N++ L G C + E + L D + +
Sbjct: 64 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 123
Query: 149 PHF-------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKL 201
P F L Q L A +A + YL + +HR + I + E Y+AK+
Sbjct: 124 PAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKI 180
Query: 202 FDFSLSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
DF LS G+ K G + ++A E +N + DV+S+G+LL +++
Sbjct: 181 ADFGLS----RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 97 EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLL 156
E + K+S H N+++L +VF+ +K L D++ E + L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT------EKVTL 121
Query: 157 SQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
S++ +I + I LH I+HR ++P I LD+ KL DF S + GE
Sbjct: 122 SEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 215 TCVKDKVTGTMGFLAPEYI------NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
V GT +LAPE I N + ++ D++S G+++ LL G F
Sbjct: 179 KL--RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L E +VF+ V L + I + + E + I +IA
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIA 142
Query: 172 YLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y H S I+HR ++P + L +G KL DF L++ + + E GT G+L
Sbjct: 143 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAGTPGYL 197
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+PE + +++ D+++ G++L +LL G F
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLAD-----HIYQNQ 148
D H D + KL H N++ L G C + E + L D + +
Sbjct: 67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 126
Query: 149 PHF-------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKL 201
P F L Q L A +A + YL + +HR + I + E Y+AK+
Sbjct: 127 PAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKI 183
Query: 202 FDFSLSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
DF LS G+ K G + ++A E +N + DV+S+G+LL +++
Sbjct: 184 ADFGLS----RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLAD-----HIYQNQ 148
D H D + KL H N++ L G C + E + L D + +
Sbjct: 57 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD 116
Query: 149 PHF-------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKL 201
P F L Q L A +A + YL + +HR + I + E Y+AK+
Sbjct: 117 PAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKI 173
Query: 202 FDFSLSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
DF LS G+ K G + ++A E +N + DV+S+G+LL +++
Sbjct: 174 ADFGLS----RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + ++ IA+ +A
Sbjct: 69 HEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKY--LRLPQLVDMSAQIASGMA 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + E + K+ DF L+ I + E + + + APE
Sbjct: 126 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
A+ YLH I+HR ++P + L +E + K+ DF S + GET + + GT
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 319
Query: 226 GFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-----DEIGAGHYWLL 277
+LAPE + T +N D +S G++L + L+G F R D+I +G Y +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 278 HYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
V + D + ++V R E+ L+
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 151 FEPLLLSQRLRIAV------HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKL 201
F+ ++ ++RL+ A + A+ YLH I+HR ++P + L +E + K+
Sbjct: 227 FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 283
Query: 202 FDFSLSVSIPEGETCVKDKVTGTMGFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQ 258
DF S + GET + + GT +LAPE + T +N D +S G++L + L+G
Sbjct: 284 TDFGHSKIL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 341
Query: 259 KIFDPSRG-----DEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
F R D+I +G Y + V + D + ++V R E+ L+
Sbjct: 342 PPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
A+ YLH I+HR ++P + L +E + K+ DF S + GET + + GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 226 GFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-----DEIGAGHYWLL 277
+LAPE + T +N D +S G++L + L+G F R D+I +G Y +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 278 HYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
V + D + ++V R E+ L+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++L E I IV E + +L D + + L L + +A +A +A
Sbjct: 63 HDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGR--ALKLPNLVDMAAQVAAGMA 119
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR +R + I + G I K+ DF L+ I + E + + + APE
Sbjct: 120 YIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L+T ++ P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 209
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
A+ YLH I+HR ++P + L +E + K+ DF S + GET + + GT
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 179
Query: 226 GFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-----DEIGAGHYWLL 277
+LAPE + T +N D +S G++L + L+G F R D+I +G Y +
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 278 HYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
V + D + ++V R E+ L+
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
A+ YLH I+HR ++P + L +E + K+ DF S + GET + + GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 226 GFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-----DEIGAGHYWLL 277
+LAPE + T +N D +S G++L + L+G F R D+I +G Y +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 278 HYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
V + D + ++V R E+ L+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
A+ YLH I+HR ++P + L +E + K+ DF S + GET + + GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 226 GFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-----DEIGAGHYWLL 277
+LAPE + T +N D +S G++L + L+G F R D+I +G Y +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 278 HYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
V + D + ++V R E+ L+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++ V I A+ YL ++HR ++PS I LDE KL DF +S + + + KD+
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDR 183
Query: 221 VTGTMGFLAPEYINT-----GDFNEKCDVFSFGMLLLVLLTGQ 258
G ++APE I+ D++ + DV+S G+ L+ L TGQ
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE----- 214
L I + IA A+ +LH S+ ++HR ++PS IF + K+ DF L ++ + E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 215 -TCVKDKVT-----GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLL 255
T + T GT +++PE I+ +++ K D+FS G++L LL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
A+ YLH I+HR ++P + L +E + K+ DF S + GET + + GT
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 186
Query: 226 GFLAPEY---INTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-----DEIGAGHYWLL 277
+LAPE + T +N D +S G++L + L+G F R D+I +G Y +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 246
Query: 278 HYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQ 311
V + D + ++V R E+ L+
Sbjct: 247 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ DF SV P + + + GT+
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTL 174
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G F+
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 26/160 (16%)
Query: 113 KNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR---LRIAVHIANA 169
+N +K + I E +NRTL D I+ L QR R+ I A
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN------LNQQRDEYWRLFRQILEA 128
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK----------D 219
++Y+H S+ I+HR ++P IF+DE K+ DF L+ ++ +K D
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 220 KVT---GTMGFLAPEYIN-TGDFNEKCDVFSFGMLLLVLL 255
+T GT ++A E ++ TG +NEK D++S G++ ++
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ +F SV P + + + GT+
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTL 172
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNE 240
I++R ++P I LD+ ++ D L+V +PEG+T +K +V GT+G++APE + +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTF 364
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D ++ G LL ++ GQ F
Sbjct: 365 SPDWWALGCLLYEMIAGQSPF 385
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNE 240
I++R ++P I LD+ ++ D L+V +PEG+T +K +V GT+G++APE + +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTF 364
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D ++ G LL ++ GQ F
Sbjct: 365 SPDWWALGCLLYEMIAGQSPF 385
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ANA++Y H S+ ++HR I+P + L K+ +F SV P + + + GT+
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTL 173
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++S G+L L G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEG---YIAKLFDFSLSVSIPEGETCVKDKVT 222
I++A+ YLH I+HR ++P I L G I K+ D + + +GE C +
Sbjct: 131 ISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FV 185
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
GT+ +LAPE + + D +SFG L +TG + F P+
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEG---YIAKLFDFSLSVSIPEGETCVKDKVT 222
I++A+ YLH I+HR ++P I L G I K+ D + + +GE C +
Sbjct: 130 ISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FV 184
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
GT+ +LAPE + + D +SFG L +TG + F P+
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 26/155 (16%)
Query: 113 KNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR---LRIAVHIANA 169
+N +K + I E +NRTL D I+ L QR R+ I A
Sbjct: 75 RNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN------LNQQRDEYWRLFRQILEA 128
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK----------D 219
++Y+H S+ I+HR ++P IF+DE K+ DF L+ ++ +K D
Sbjct: 129 LSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 220 KVT---GTMGFLAPEYIN-TGDFNEKCDVFSFGML 250
+T GT ++A E ++ TG +NEK D +S G++
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGII 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H+ +++L E I IV E + +L D + + L L Q + +A IA+ +A
Sbjct: 72 HEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y+ +HR + + I + E + K+ DF L+ I + E + + + APE
Sbjct: 129 YVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
G F K DV+SFG+LL L T ++ P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH +++L G CLE +VFE +++ L+D++ + F L L + + + +
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---LGMCLDVCEGM 114
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
AYL ++HR + + E + K+ DF ++ + + + + + +P
Sbjct: 115 AYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFD 290
E + ++ K DV+SFG+L+ + + KI EN
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------------PYENRSNS 209
Query: 291 EIVDPIIVSEGPRVGKEKQLQGFRELALM--CVCESAEDRPTTVDVAKRLKQIYQ 343
E+V+ I S G R+ K + L +M C E EDRP + ++L +I +
Sbjct: 210 EVVEDI--STGFRLYKPR-LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH +++L G CLE +VFE +++ L+D++ + F L L + + + +
Sbjct: 63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---LGMCLDVCEGM 119
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
AYL ++HR + + E + K+ DF ++ + + + + + +P
Sbjct: 120 AYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 176
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFD 290
E + ++ K DV+SFG+L+ + + KI EN
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------------PYENRSNS 214
Query: 291 EIVDPIIVSEGPRVGKEKQLQGFRELALM--CVCESAEDRPTTVDVAKRLKQIYQ 343
E+V+ I S G R+ K + L +M C E EDRP + ++L +I +
Sbjct: 215 EVVEDI--STGFRLYKPR-LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH +++L G CLE +VFE +++ L+D++ + F L L + + + +
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---LGMCLDVCEGM 116
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
AYL ++HR + + E + K+ DF ++ + + + + + +P
Sbjct: 117 AYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFD 290
E + ++ K DV+SFG+L+ + + KI EN
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------------PYENRSNS 211
Query: 291 EIVDPIIVSEGPRVGKEKQLQGFRELALM--CVCESAEDRPTTVDVAKRLKQIYQ 343
E+V+ I S G R+ K + L +M C E EDRP + ++L +I +
Sbjct: 212 EVVEDI--STGFRLYKPR-LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 46 GFTIRELEIATNN-----FDARNVIKDGYAYKF----YKGFVEDRTVSVMKFNDILNDGH 96
G +E+E+ + F A++ I DG Y Y +R V + D +N H
Sbjct: 10 GMDFKEIELIGSGGFGQVFKAKHRI-DGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVH 68
Query: 97 ED-CFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLL 155
+ C++ + + SS + T C I E TL I + + +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLF------IQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
L+ L + I + Y+H S+ +++R ++PS IFL + K+ DF L S+
Sbjct: 123 LA--LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 216 CVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLL 255
+ K GT+ +++PE I++ D+ ++ D+++ G++L LL
Sbjct: 178 RXRSK--GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFES----------VKNRTLADH 143
D E + + S L H+N++ L G C PV+V ++ + AD
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRRKAEAD- 148
Query: 144 IYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFD 203
++ PL L L + +A +A+L S+ +HR + + L G++AK+ D
Sbjct: 149 --LDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGD 203
Query: 204 FSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
F L+ I + VK + ++APE I + + DV+S+G+LL + +
Sbjct: 204 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH +++L G CLE +VFE +++ L+D++ + F L L + + + +
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---LGMCLDVCEGM 116
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
AYL ++HR + + E + K+ DF ++ + + + + + +P
Sbjct: 117 AYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFD 290
E + ++ K DV+SFG+L+ + + KI EN
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------------PYENRSNS 211
Query: 291 EIVDPIIVSEGPRVGKEKQLQGFRELALM--CVCESAEDRPTTVDVAKRLKQI 341
E+V+ I S G R+ K + L +M C E EDRP + ++L I
Sbjct: 212 EVVEDI--STGFRLYKPR-LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 112 HKNVLKLTGCCLETRIPVI--VFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H+N++K G C E I + E + + +L +++ +N+ + L Q+L+ AV I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKG 138
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE--TCVKDKVTGTMGF 227
+ YL SR +HR + + ++ + K+ DF L+ +I + VKD + +
Sbjct: 139 MDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 112 HKNVLKLTGCCLETRIPVI--VFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
H+N++K G C E I + E + + +L +++ +N+ + L Q+L+ AV I
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKG 126
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE--TCVKDKVTGTMGF 227
+ YL SR +HR + + ++ + K+ DF L+ +I + VKD + +
Sbjct: 127 MDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 183
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F DV+SFG+ L LLT
Sbjct: 184 YAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH +++L G CLE +VFE +++ L+D++ + F L L + + + +
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---LGMCLDVCEGM 136
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
AYL ++HR + + E + K+ DF ++ + + + + + +P
Sbjct: 137 AYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFD 290
E + ++ K DV+SFG+L+ + + KI EN
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------------PYENRSNS 231
Query: 291 EIVDPIIVSEGPRVGKEKQLQGFRELALM--CVCESAEDRPTTVDVAKRLKQIYQ 343
E+V+ I S G R+ K + L +M C E EDRP + ++L +I +
Sbjct: 232 EVVEDI--STGFRLYKPR-LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE----- 214
L I + IA A+ +LH S+ ++HR ++PS IF + K+ DF L ++ + E
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 215 ---TCVKDKVTGTMG---FLAPEYINTGDFNEKCDVFSFGMLLLVLL 255
+ TG +G +++PE I+ ++ K D+FS G++L LL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 39 GKFNPIRGFTIRELEIATNNFDARNVIKDGYAYKFY----KGFVEDRT---VSVMKFNDI 91
G F+ + E E+A + G Y KG V+D V++ N+
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 92 LNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI------Y 145
+ F N K + +V++L G + + +++ E + L ++
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 146 QNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
+N P P LS+ +++A IA+ +AYL+ + +HR + + E + K+ DF
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 206 LSVSIPEGETCVKD-KVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
++ I E + K K + +++PE + G F DV+SFG++L + T
Sbjct: 178 MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFES----------VKNRTLADH 143
D E + + S L H+N++ L G C PV+V ++ + AD
Sbjct: 83 DEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRRKAEAD- 140
Query: 144 IYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFD 203
++ PL L L + +A +A+L S+ +HR + + L G++AK+ D
Sbjct: 141 --LDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGD 195
Query: 204 FSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
F L+ I + VK + ++APE I + + DV+S+G+LL + +
Sbjct: 196 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 64 VIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCL 123
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 29 MVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 87
Query: 124 ETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGF 177
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 88 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--- 144
Query: 178 SRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINTG 236
++ +HR + + + K+ DF ++ I E + K K + ++APE + G
Sbjct: 145 AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDG 204
Query: 237 DFNEKCDVFSFGMLL 251
F D++SFG++L
Sbjct: 205 VFTTSSDMWSFGVVL 219
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 63 NVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCC 122
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 31 GMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 123 LETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIG 176
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN-- 147
Query: 177 FSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINT 235
++ +HR + + + K+ DF ++ I E + K K + ++APE +
Sbjct: 148 -AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKD 206
Query: 236 GDFNEKCDVFSFGMLL 251
G F D++SFG++L
Sbjct: 207 GVFTTSSDMWSFGVVL 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 64 VIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCL 123
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 32 MVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 124 ETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGF 177
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--- 147
Query: 178 SRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINTG 236
++ +HR + + + K+ DF ++ I E + K K + ++APE + G
Sbjct: 148 AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDG 207
Query: 237 DFNEKCDVFSFGMLL 251
F D++SFG++L
Sbjct: 208 VFTTSSDMWSFGVVL 222
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 16/105 (15%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEG------ETCVK 218
I +A+AY+H S+ HR ++P + DE + KL DF L P+G +TC
Sbjct: 116 QIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCC- 170
Query: 219 DKVTGTMGFLAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD 262
G++ + APE I + + DV+S G+LL VL+ G FD
Sbjct: 171 ----GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 160 LRIAVHIANAIAYLH--IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV 217
LR+ + A+ H +LHR ++P+ +FLD KL DF L+ + E
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
K+ V GT +++PE +N +NEK D++S G LL L
Sbjct: 174 KEFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 19/162 (11%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR--LRIAVH 165
+++ H +++ L + +VF+ ++ L D++ E + LS++ I
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT------EKVALSEKETRSIMRS 208
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ A+++LH + I+HR ++P I LD+ +L DF S + GE ++ GT
Sbjct: 209 LLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTP 263
Query: 226 GFLAPEYINTG------DFNEKCDVFSFGMLLLVLLTGQKIF 261
G+LAPE + + ++ D+++ G++L LL G F
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 134 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 96 HEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFE------------SVKNRTLADH 143
E + + ++L SH+N++ L G C + ++FE S + + D
Sbjct: 92 REALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 144 I-YQNQPHFEP------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEG 196
I Y+NQ E L L A +A + +L + +HR + + + G
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHG 208
Query: 197 YIAKLFDFSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLL 255
+ K+ DF L+ I + V+ + ++APE + G + K DV+S+G+LL +
Sbjct: 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
Query: 256 TGQKIFDPSRGDEIGAGHYWLLH 278
+ +P G + A Y L+
Sbjct: 269 SLG--VNPYPGIPVDANFYKLIQ 289
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 108 KLSSHKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHI 166
K H ++KL T+ P+ I+ E + +L D + ++ +PL + + + I
Sbjct: 232 KTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQI 287
Query: 167 ANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG 226
A +A++ R +HR +R + I + + K+ DF L+ + +
Sbjct: 288 AEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA----------RVGAKFPIK 334
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
+ APE IN G F K DV+SFG+LL+ ++T +I P
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 371
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNE 240
+LHR ++P+ +FLD KL DF L+ I +T GT +++PE +N +NE
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 241 KCDVFSFGMLLLVL 254
K D++S G LL L
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 39 GKFNPIRGFTIRELEIATNNFDARNVIKDGYAYKFY----KGFVEDRT---VSVMKFNDI 91
G F+ + E E+A + G Y KG V+D V++ N+
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 92 LNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI------Y 145
+ F N K + +V++L G + + +++ E + L ++
Sbjct: 61 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 120
Query: 146 QNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
+N P P LS+ +++A IA+ +AYL+ + +HR + + E + K+ DF
Sbjct: 121 ENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 206 LSVSIPEGETCVKD-KVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
++ I E + K K + +++PE + G F DV+SFG++L + T
Sbjct: 178 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 160 LRIAVHIANAIAYLH--IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV 217
LR+ + A+ H +LHR ++P+ +FLD KL DF L+ I +T
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA-RILNHDTSF 172
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
GT +++PE +N +NEK D++S G LL L
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 118
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YL S+ LHR + +++ + K+ DF LS + + E + + P
Sbjct: 119 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPP 175
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
E + F+ K D+++FG+L+ + + K+
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 26/160 (16%)
Query: 113 KNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR---LRIAVHIANA 169
+N +K + I E +N TL D I+ L QR R+ I A
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN------LNQQRDEYWRLFRQILEA 128
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVK----------D 219
++Y+H S+ I+HR ++P IF+DE K+ DF L+ ++ +K D
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 220 KVT---GTMGFLAPEYIN-TGDFNEKCDVFSFGMLLLVLL 255
+T GT ++A E ++ TG +NEK D++S G++ ++
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 63 NVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCC 122
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 30 GMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 88
Query: 123 LETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIG 176
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 89 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN-- 146
Query: 177 FSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINT 235
++ +HR + + + K+ DF ++ I E + K K + ++APE +
Sbjct: 147 -AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 205
Query: 236 GDFNEKCDVFSFGMLL 251
G F D++SFG++L
Sbjct: 206 GVFTTSSDMWSFGVVL 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFE-----------PLLLSQR 159
H+++++ G C E R ++VFE +++ L + + P + PL L Q
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC-VK 218
L +A +A + YL G +HR + + +G + K+ DF +S I + V
Sbjct: 161 LAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 219 DKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ + ++ PE I F + DV+SFG++L + T
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFE-----------PLLLSQR 159
H+++++ G C E R ++VFE +++ L + + P + PL L Q
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC-VK 218
L +A +A + YL G +HR + + +G + K+ DF +S I + V
Sbjct: 138 LAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 219 DKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ + ++ PE I F + DV+SFG++L + T
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFE-----------PLLLSQR 159
H+++++ G C E R ++VFE +++ L + + P + PL L Q
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC-VK 218
L +A +A + YL G +HR + + +G + K+ DF +S I + V
Sbjct: 132 LAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 219 DKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ + ++ PE I F + DV+SFG++L + T
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H N+++L E +VF+ V L + I + + E + I
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIHQIL 140
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
++ ++H I+HR ++P + L +G KL DF L++ + +GE GT
Sbjct: 141 ESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFAGT 196
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
G+L+PE + + + D+++ G++L +LL G F
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 100 FNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR 159
F + + +KN+L+L + +VFE ++ ++ HI Q Q HF S
Sbjct: 58 FREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREAS-- 114
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEG---YIAKLFDFSLSVSIPEGETC 216
R+ +A A+ +LH ++ I HR ++P I + K+ DF L + +C
Sbjct: 115 -RVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC 170
Query: 217 VK------DKVTGTMGFLAPEYI-----NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
G+ ++APE + ++++CD++S G++L ++L+G F
Sbjct: 171 TPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
Query: 266 GDEIGAGHYWLLHYVKKCIENNEFDEI 292
G + G W V + +N F+ I
Sbjct: 231 GADCG----WDRGEVCRVCQNKLFESI 253
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 124
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDE 291
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------------------- 221
Query: 292 IVDPIIVSEGPRVGKEKQL-QGFRELALMCVCESAEDRPTTVDVAKRLKQIY 342
++ +G R+G + +L +C E+RP V RL+ Y
Sbjct: 222 -----MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 143 HIY---QNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIA 199
HIY ++ P F+ + + I + + +LH R I++R ++P + LD+
Sbjct: 275 HIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNV 328
Query: 200 KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
++ D L+V + G+T K GT GF+APE + +++ D F+ G+ L ++ +
Sbjct: 329 RISDLGLAVELKAGQTKTK-GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 260 IFDPSRGDEI 269
F +RG+++
Sbjct: 388 PFR-ARGEKV 396
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP---- 149
D E + + S L H+N++ L G C +++ E L + + + +P
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 150 ------HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKL 201
H LS R L + +A +A+L S+ +HR + + L G++AK+
Sbjct: 151 YSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKI 207
Query: 202 FDFSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
DF L+ I + VK + ++APE I + + DV+S+G+LL + +
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 64 VIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCL 123
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 33 MVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 91
Query: 124 ETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGF 177
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 92 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--- 148
Query: 178 SRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINTG 236
++ +HR + + + K+ DF ++ I E + K K + ++APE + G
Sbjct: 149 AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG 208
Query: 237 DFNEKCDVFSFGMLL 251
F D++SFG++L
Sbjct: 209 VFTTSSDMWSFGVVL 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 122
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDE 291
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------------------- 219
Query: 292 IVDPIIVSEGPRVGKEKQL-QGFRELALMCVCESAEDRPTTVDVAKRLKQIY 342
++ +G R+G + +L +C E+RP V RL+ Y
Sbjct: 220 -----MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 266
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 143 HIY---QNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIA 199
HIY ++ P F+ + + I + + +LH R I++R ++P + LD+
Sbjct: 275 HIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNV 328
Query: 200 KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
++ D L+V + G+T K GT GF+APE + +++ D F+ G+ L ++ +
Sbjct: 329 RISDLGLAVELKAGQTKTK-GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 260 IFDPSRGDEI 269
F +RG+++
Sbjct: 388 PFR-ARGEKV 396
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 11/195 (5%)
Query: 64 VIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCL 123
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 32 MVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 90
Query: 124 ETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGF 177
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 91 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN--- 147
Query: 178 SRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINTG 236
++ +HR + + + K+ DF ++ I E + K K + ++APE + G
Sbjct: 148 AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG 207
Query: 237 DFNEKCDVFSFGMLL 251
F D++SFG++L
Sbjct: 208 VFTTSSDMWSFGVVL 222
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 143 HIY---QNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIA 199
HIY ++ P F+ + + I + + +LH R I++R ++P + LD+
Sbjct: 275 HIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNV 328
Query: 200 KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
++ D L+V + G+T K GT GF+APE + +++ D F+ G+ L ++ +
Sbjct: 329 RISDLGLAVELKAGQTKTK-GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 260 IFDPSRGDEI 269
F +RG+++
Sbjct: 388 PFR-ARGEKV 396
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 143 HIY---QNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIA 199
HIY ++ P F+ + + I + + +LH R I++R ++P + LD+
Sbjct: 275 HIYNVDEDNPGFQE---PRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNV 328
Query: 200 KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
++ D L+V + G+T K GT GF+APE + +++ D F+ G+ L ++ +
Sbjct: 329 RISDLGLAVELKAGQTKTK-GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 260 IFDPSRGDEI 269
F +RG+++
Sbjct: 388 PFR-ARGEKV 396
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 124
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG---- 226
YL S+ LHR + +++ + K+ DF LS + + D+ T ++G
Sbjct: 125 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV------LDDEYTSSVGSKFP 175
Query: 227 --FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
+ PE + F+ K D+++FG+L+ + + K+
Sbjct: 176 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 211
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 117
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG---- 226
YL S+ LHR + +++ + K+ DF LS + + D+ T ++G
Sbjct: 118 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV------LDDEYTSSVGSKFP 168
Query: 227 --FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
+ PE + F+ K D+++FG+L+ + + K+
Sbjct: 169 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 204
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 63 NVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCC 122
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 31 GMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 123 LETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIG 176
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN-- 147
Query: 177 FSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINT 235
++ +HR + + + K+ DF ++ I E + K K + ++APE +
Sbjct: 148 -AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 206
Query: 236 GDFNEKCDVFSFGMLL 251
G F D++SFG++L
Sbjct: 207 GVFTTSSDMWSFGVVL 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 118
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG---- 226
YL S+ LHR + +++ + K+ DF LS + + D+ T ++G
Sbjct: 119 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV------LDDEYTSSVGSKFP 169
Query: 227 --FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
+ PE + F+ K D+++FG+L+ + + K+
Sbjct: 170 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 128
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDE 291
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------------------- 225
Query: 292 IVDPIIVSEGPRVGKEKQL-QGFRELALMCVCESAEDRPTTVDVAKRLKQIY 342
++ +G R+G + +L +C E+RP V RL+ Y
Sbjct: 226 -----MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 134
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGA 271
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 128
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDE 291
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-------------------- 225
Query: 292 IVDPIIVSEGPRVGKEKQL-QGFRELALMCVCESAEDRPTTVDVAKRLKQIY 342
++ +G R+G + +L +C E+RP V RL+ Y
Sbjct: 226 -----MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 272
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G R+ +IV E ++N +L + + F + L LR + +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMR 165
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + + +D + K+ DF LS + + G + +
Sbjct: 166 YLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 229 APEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIF 261
APE I F+ DV+SFG+++ VL G++ +
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 113
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG---- 226
YL S+ LHR + +++ + K+ DF LS + + D+ T ++G
Sbjct: 114 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV------LDDEYTSSVGSKFP 164
Query: 227 --FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
+ PE + F+ K D+++FG+L+ + + K+
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 142 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 140 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 171 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 133
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YL S+ LHR + +++ + K+ DF LS + + E + + P
Sbjct: 134 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPP 190
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
E + F+ K D+++FG+L+ + + K+
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 91 ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPH 150
I++ D I + H N++ L + + +V E +K L D I + +
Sbjct: 54 IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-- 111
Query: 151 FEPLLLSQRLRIAV--HIANAIAYLHIGFSRPILHRKIRPSRI-FLDEG---YIAKLFDF 204
S+R AV I + YLH ++ ++HR ++PS I ++DE ++ DF
Sbjct: 112 ----FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 205 SLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
+ + E + T F+APE + ++ CD++S G+LL +LTG F
Sbjct: 165 GFAKQL-RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223
Query: 265 RGD-------EIGAGHYWL 276
D IG+G + L
Sbjct: 224 PDDTPEEILARIGSGKFSL 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 144
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGA 271
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 144
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGA 271
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 136 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + ++ + YL
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKD---KNIIELVHQVSMGMKYLE 142
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT--MGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 143 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGA 271
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH+ +++L G C + R I+ E + N L +++ + + F+ Q L + + A+
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAM 133
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG---- 226
YL S+ LHR + +++ + K+ DF LS + + D+ T ++G
Sbjct: 134 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV------LDDEYTSSVGSKFP 184
Query: 227 --FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
+ PE + F+ K D+++FG+L+ + + K+
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 142 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 149 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 93 NDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFE 152
N+ +D + F KL H N ++ GC L +V E + +D + + H +
Sbjct: 56 NEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLG-SASDLL---EVHKK 110
Query: 153 PLLLSQRLRIAVHIANAI---AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDF-SLSV 208
PL Q + IA A+ AYLH S ++HR ++ I L E + KL DF S S+
Sbjct: 111 PL---QEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164
Query: 209 SIPEGETCVKDKVTGTMGFLAPEYI---NTGDFNEKCDVFSFGM 249
P + GT ++APE I + G ++ K DV+S G+
Sbjct: 165 MAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-----------------ESVK 136
D E + + S L H+N++ L G C PV+V E++
Sbjct: 76 DEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 137 NRTLA---DHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
+LA D ++ PL L L + +A +A+L S+ +HR + + L
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 191
Query: 194 DEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLL 252
G++AK+ DF L+ I + VK + ++APE I + + DV+S+G+LL
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 253 VLLT 256
+ +
Sbjct: 252 EIFS 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 93 NDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFE 152
N+ +D + F KL H N ++ GC L +V E + +D + + H +
Sbjct: 95 NEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLG-SASDLL---EVHKK 149
Query: 153 PLLLSQRLRIAV--HIA-NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDF-SLSV 208
PL Q + IA H A +AYLH S ++HR ++ I L E + KL DF S S+
Sbjct: 150 PL---QEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASI 203
Query: 209 SIPEGETCVKDKVTGTMGFLAPEYI---NTGDFNEKCDVFSFGM 249
P + GT ++APE I + G ++ K DV+S G+
Sbjct: 204 MAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI 241
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH +++L G CLE +V E +++ L+D++ + F L L + + + +
Sbjct: 61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL---LGMCLDVCEGM 117
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
AYL ++HR + + E + K+ DF ++ + + + + + +P
Sbjct: 118 AYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 174
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFD 290
E + ++ K DV+SFG+L+ + + KI EN
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------------PYENRSNS 212
Query: 291 EIVDPIIVSEGPRVGKEKQLQGFRELALM--CVCESAEDRPTTVDVAKRLKQIYQ 343
E+V+ I S G R+ K + L +M C E EDRP + ++L +I +
Sbjct: 213 EVVEDI--STGFRLYKPR-LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G R+ +IV E ++N +L + + F + L LR + +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMR 165
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + + +D + K+ DF LS + + G + +
Sbjct: 166 YLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT 221
Query: 229 APEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIF 261
APE I F+ DV+SFG+++ VL G++ +
Sbjct: 222 APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
KL H +++KL +V E V L D+I ++ E + R+ I
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEARRLFQQIL 121
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H ++HR ++P + LD AK+ DF LS + +GE ++D G+ +
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRDS-CGSPNY 176
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD----PSRGDEIGAGHYWLLHYVKK 282
APE I+ + + D++S G++L LL G FD P+ +I G +++ Y+ +
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNR 236
Query: 283 CI 284
+
Sbjct: 237 SV 238
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 83 VSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVK----NR 138
V+V D ++ +D + L H++++K G C+E ++VFE +K N+
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 139 TLADH------IYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF 192
L H + + P E L SQ L IA IA + YL S+ +HR +
Sbjct: 105 FLRAHGPDAVLMAEGNPPTE-LTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCL 160
Query: 193 LDEGYIAKLFDFSLSVSIPEGETC-VKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLL 251
+ E + K+ DF +S + + V + ++ PE I F + DV+S G++L
Sbjct: 161 VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220
Query: 252 LVLLT 256
+ T
Sbjct: 221 WEIFT 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 63 NVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCC 122
++ +G A KG E R V+V N+ + F N K + +V++L G
Sbjct: 31 GMVYEGNARDIIKGEAETR-VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 123 LETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIANAIAYLHIG 176
+ + ++V E + + L ++ +N P P L + +++A IA+ +AYL+
Sbjct: 90 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN-- 147
Query: 177 FSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMGFLAPEYINT 235
++ +HR + + + K+ DF ++ I E K K + ++APE +
Sbjct: 148 -AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKD 206
Query: 236 GDFNEKCDVFSFGMLL 251
G F D++SFG++L
Sbjct: 207 GVFTTSSDMWSFGVVL 222
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLAD-HIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H+N++ L C + + +VFE V + L D ++ N ++ + + I N I
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-----KYLFQIINGI 137
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
+ H S I+HR I+P I + + + KL DF + ++ D+V T + AP
Sbjct: 138 GFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAP 193
Query: 231 EYINTGD--FNEKCDVFSFGMLLLVLLTGQKIFDPSRGD 267
E + GD + + DV++ G L+ + G+ +F P D
Sbjct: 194 ELL-VGDVKYGKAVDVWAIGCLVTEMFMGEPLF-PGDSD 230
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A A+ +LH S I++R ++P I LDE KL DF LS + E GT+
Sbjct: 136 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTV 191
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
++APE +N + D +SFG+L+ +LTG
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H N+++L E ++F+ V L + I + + E + I
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE----ADASHCIQQIL 120
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
A+ + H ++HR ++P + L +G KL DF L++ + EGE GT
Sbjct: 121 EAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGT 176
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF---DPSR-GDEIGAGHY 274
G+L+PE + + + D+++ G++L +LL G F D R +I AG Y
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 230
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A A+ +LH S I++R ++P I LDE KL DF LS + E GT+
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTV 190
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
++APE +N + D +SFG+L+ +LTG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ +N P P LS+ +++A IA
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 136 DGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H N+++L E +VF+ V L + I + + E + I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIQQIL 113
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
++ + H+ I+HR ++P + L +G KL DF L++ + +G+ GT
Sbjct: 114 ESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGT 169
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF---DPSR-GDEIGAGHY 274
G+L+PE + + + D+++ G++L +LL G F D R +I AG Y
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H N+++L E ++F+ V L + I + + E + I
Sbjct: 76 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE----ADASHCIQQIL 131
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
A+ + H ++HR ++P + L +G KL DF L++ + EGE GT
Sbjct: 132 EAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGT 187
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF---DPSR-GDEIGAGHY 274
G+L+PE + + + D+++ G++L +LL G F D R +I AG Y
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 241
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A A+ +LH S I++R ++P I LDE KL DF LS + E GT+
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTV 190
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
++APE +N + D +SFG+L+ +LTG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIV------------FESVKNRTLA 141
D E + + S L H+N++ L G C PV+V F K+R L
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRRKSRVL- 148
Query: 142 DHIYQNQPHFEPL--LLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGY 197
+ P F LS R L + +A +A+L S+ +HR + + L G+
Sbjct: 149 ----ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201
Query: 198 IAKLFDFSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+AK+ DF L+ I + VK + ++APE I + + DV+S+G+LL + +
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ N P P LS+ +++A IA
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 139 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 66 HPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 120
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDPSQ 218
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 219 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H N+++L E +VF+ V L + I + + E + I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIQQIL 113
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
++ + H+ I+HR ++P + L +G KL DF L++ + +G+ GT
Sbjct: 114 ESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFGFAGT 169
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF---DPSR-GDEIGAGHY 274
G+L+PE + + + D+++ G++L +LL G F D R +I AG Y
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 14/187 (7%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 139 TLADHIYQNQPHFEP--------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSR 190
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAARN 174
Query: 191 IFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGM 249
I L E + K+ DF L+ I + V K + ++APE I + + DV+SFG+
Sbjct: 175 ILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 250 LLLVLLT 256
LL + +
Sbjct: 235 LLWEIFS 241
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 91 ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPH 150
I++ D I + H N++ L + + +V E K L D I + +
Sbjct: 54 IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK-- 111
Query: 151 FEPLLLSQRLRIAV--HIANAIAYLHIGFSRPILHRKIRPSRI-FLDEG---YIAKLFDF 204
S+R AV I + YLH ++ ++HR ++PS I ++DE ++ DF
Sbjct: 112 ----FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 205 SLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
+ + E + T F+APE + ++ CD++S G+LL LTG F
Sbjct: 165 GFAKQL-RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANG 223
Query: 265 RGD-------EIGAGHYWL 276
D IG+G + L
Sbjct: 224 PDDTPEEILARIGSGKFSL 242
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
KL H +++KL +V E V L D+I ++ E + R+ I
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEARRLFQQIL 121
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H ++HR ++P + LD AK+ DF LS + +GE G+ +
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNY 176
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD----PSRGDEIGAGHYWLLHYVKK 282
APE I+ + + D++S G++L LL G FD P+ +I G +++ Y+ +
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNR 236
Query: 283 CIENNEFDEI-VDPI 296
+ + VDP+
Sbjct: 237 SVATLLMHMLQVDPL 251
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A+A+ Y H R ++HR I+P + + K+ DF SV P + + + GT+
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTL 176
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++ G+L L G FD
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFL--DEGYIAKLFDFSLS---VSIPEGETC 216
I I +A+ YLH ++ I HR I+P ++ + KL DF LS + GE
Sbjct: 173 IMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 217 VKDKVTGTMGFLAPEYINTGD--FNEKCDVFSFGMLLLVLLTGQKIF 261
GT F+APE +NT + + KCD +S G+LL +LL G F
Sbjct: 230 GMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A+A+ Y H R ++HR I+P + + K+ DF SV P + + + GT+
Sbjct: 124 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTL 177
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++ G+L L G FD
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +GF +HR + I ++ + K+ DF LS + + G + +
Sbjct: 162 YLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
+VFE ++ ++ HI++ + HF L S + +A+A+ +LH ++ I HR ++P
Sbjct: 88 LVFEKMRGGSILSHIHKRR-HFNELEAS---VVVQDVASALDFLH---NKGIAHRDLKPE 140
Query: 190 RIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVT------GTMGFLAPEYINT----- 235
I + + K+ DF L I C G+ ++APE +
Sbjct: 141 NILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 236 GDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIG 270
++++CD++S G++L +LL+G F G + G
Sbjct: 201 SIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A+A+ Y H R ++HR I+P + + K+ DF SV P + + + GT+
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTL 176
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
+L PE I +EK D++ G+L L G FD
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 114 NVLKLTGCCLETRIPVIVFESVKNRTLADHI------YQNQPHFEPLLLSQRLRIAVHIA 167
+V++L G + + +++ E + L ++ N P P LS+ +++A IA
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKD-KVTGTMG 226
+ +AYL+ + +HR + + E + K+ DF ++ I E + K K +
Sbjct: 149 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+++PE + G F DV+SFG++L + T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H N+++L E +VF+ V L + I + + E + I
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE----ADASHCIQQIL 113
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
A+ + H ++HR ++P + L +G KL DF L++ + +G+ GT
Sbjct: 114 EAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGFAGT 169
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
G+L+PE + + + D+++ G++L +LL G F
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 111 SHKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
SH N++KL ET + +V E V L D I + + E I A
Sbjct: 106 SHPNIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGYYSE----RDAADAVKQILEA 160
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG 226
+AYLH I+HR ++P + K+ DF LS I E + +K V GT G
Sbjct: 161 VAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLS-KIVEHQVLMK-TVCGTPG 215
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
+ APE + + + D++S G++ +LL G + F RGD+
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ 257
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 34/236 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 66 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 120
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDPSQ 218
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQH 344
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 219 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL + +V E + L + I + + HF S +R + +A++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMR---KLVSAVS 120
Query: 172 YLH-IGFSRPILHRKIRPSRI-FLDEG--YIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++H +G ++HR ++P + F DE K+ DF + P +K T+ +
Sbjct: 121 HMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHY 175
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE +N ++E CD++S G++L +L+GQ F
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 132
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 133 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
+VFE ++ ++ HI++ + HF L S + +A+A+ +LH ++ I HR ++P
Sbjct: 88 LVFEKMRGGSILSHIHKRR-HFNELEASV---VVQDVASALDFLH---NKGIAHRDLKPE 140
Query: 190 RIFLD---EGYIAKLFDFSLSVSIPEGETCVKDKVT------GTMGFLAPEYINT----- 235
I + + K+ DF L I C G+ ++APE +
Sbjct: 141 NILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 236 GDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIG 270
++++CD++S G++L +LL+G F G + G
Sbjct: 201 SIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 69 HPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 123
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 39/233 (16%)
Query: 73 FYKGFVEDRTVSVMKFND----------------ILNDGHEDCFNNIIFASKLSSHKNVL 116
F G+V T+ V +++ +++ D I + H N++
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNII 84
Query: 117 KLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR-LRIAVH-IANAIAYLH 174
L + + +V E ++ L D I + + S+R +H I + YLH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLH 138
Query: 175 IGFSRPILHRKIRPSRI-FLDEG---YIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
S+ ++HR ++PS I ++DE ++ DF + + E + T F+AP
Sbjct: 139 ---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAP 194
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIF--DPSRGDE-----IGAGHYWL 276
E + ++E CD++S G+LL +L G F PS E IG+G + L
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 68 HPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 122
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 39/233 (16%)
Query: 73 FYKGFVEDRTVSVMKFND----------------ILNDGHEDCFNNIIFASKLSSHKNVL 116
F G+V T+ V +++ +++ D I + H N++
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNII 84
Query: 117 KLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQR-LRIAVH-IANAIAYLH 174
L + + +V E ++ L D I + + S+R +H I + YLH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLH 138
Query: 175 IGFSRPILHRKIRPSRI-FLDEG---YIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
S+ ++HR ++PS I ++DE ++ DF + + E + T F+AP
Sbjct: 139 ---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAP 194
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIF--DPSRGDE-----IGAGHYWL 276
E + ++E CD++S G+LL +L G F PS E IG+G + L
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIV------------FESVKNRTLA 141
D E + + S L H+N++ L G C PV+V F K+R L
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGG-PVLVITEYCCYGDLLNFLRRKSRVL- 148
Query: 142 DHIYQNQPHFEPLLLSQRLRIAVH----IANAIAYLHIGFSRPILHRKIRPSRIFLDEGY 197
+ P F + R +H +A +A+L S+ +HR + + L G+
Sbjct: 149 ----ETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201
Query: 198 IAKLFDFSLSVSI-PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+AK+ DF L+ I + VK + ++APE I + + DV+S+G+LL + +
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + + ++ + YL
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNI---IELVHQVSMGMKYLE 486
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 487 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGA 271
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 68 HPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 122
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
++++ G C E ++V E + L ++ QN+ H + + + + ++ + YL
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNI---IELVHQVSMGMKYLE 487
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMGFLAPEY 232
+HR + + L + AK+ DF LS ++ E K + G + + APE
Sbjct: 488 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRGDEIGA 271
IN F+ K DV+SFG+L+ + GQK + +G E+ A
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH N+++L G + + +I+ E ++N L + + F L L LR IA +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGM 160
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL + +HR + I ++ + K+ DF LS + + G + +
Sbjct: 161 KYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLL--HYVKKCIEN 286
APE I+ F DV+SFG+++ ++T G YW L H V K I +
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMT------------YGERPYWELSNHEVMKAIND 265
Query: 287 N 287
Sbjct: 266 G 266
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 139 TLADHIYQNQPHFEP----------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 120 NLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAA 176
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSF 247
I L E + K+ DF L+ I + V K + ++APE I + + DV+SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 248 GMLLLVLLT 256
G+LL + +
Sbjct: 237 GVLLWEIFS 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 75 KGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLET--RIPVIVF 132
KG E + ++K + ++ D +C L L C +T R+ V
Sbjct: 41 KGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRL-YFVM 99
Query: 133 ESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF 192
E V L HI Q EP Q + A I+ + +LH R I++R ++ +
Sbjct: 100 EYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVM 152
Query: 193 LD-EGYIAKLFDFSLSVSIPEGETCVKDKVT-----GTMGFLAPEYINTGDFNEKCDVFS 246
LD EG+I K+ DF + + + D VT GT ++APE I + + D ++
Sbjct: 153 LDSEGHI-KIADFGMC------KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWA 205
Query: 247 FGMLLLVLLTGQKIFDPSRGDEI 269
+G+LL +L GQ FD DE+
Sbjct: 206 YGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
KL H +++KL +V E V L D+I +N E + R+ I
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE----KESRRLFQQIL 126
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE----TCVKDKVTG 223
+ + Y H ++HR ++P + LD AK+ DF LS + +GE +C G
Sbjct: 127 SGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC------G 177
Query: 224 TMGFLAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD----PSRGDEIGAGHYWLLH 278
+ + APE I+ + + D++S G++L LL G FD P+ +I G ++
Sbjct: 178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ 237
Query: 279 YVKKCI 284
Y+ +
Sbjct: 238 YLNPSV 243
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L G + +IV E ++N L + ++ F + L LR IA +
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMR 159
Query: 172 YL-HIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS I + V G + +
Sbjct: 160 YLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
APE I F DV+S+G+++ +++ G++ +D S D I A
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 132
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 133 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
I +A+A+ Y H + ++HR I+P + L K+ DF SV P + + +
Sbjct: 128 IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTM 181
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
GT+ +L PE I NEK D++ G+L LL G F+ + +E
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 73 HPNLVQLLGVC--TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 127
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDLSQ 225
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 226 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 149
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 150 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 68 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 122
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 73 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 127
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 69 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 123
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 159
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 160 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 34/236 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 66 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 120
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT 177
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDPSQ 218
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQH 344
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 219 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 68 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 122
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 70 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 124
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 81 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 135
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
KL H +++KL V+V E L D+I + + E + R I
Sbjct: 64 KLLRHPHIIKLYDVITTPTDIVMVIEYAGGE-LFDYIVEKKRMTE----DEGRRFFQQII 118
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
AI Y H I+HR ++P + LD+ K+ DF LS + +G G+ +
Sbjct: 119 CAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL--KTSCGSPNY 173
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD 262
APE IN + + DV+S G++L V+L G+ FD
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 73 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 127
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 73 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 127
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 70 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 124
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 70 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 124
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 68 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 122
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDLSQ 220
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 221 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 272 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 326
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 327 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 275 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISS 329
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 330 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 386
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 72 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 126
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 73 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 127
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDLSQ 225
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 226 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 68 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 122
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE + F+ K DV++FG+LL + T
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 14/187 (7%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 139 TLADHIYQNQPHFEP--------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSR 190
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKXIHRDLAARN 174
Query: 191 IFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGM 249
I L E + K+ DF L+ I + V K + ++APE I + + DV+SFG+
Sbjct: 175 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 234
Query: 250 LLLVLLT 256
LL + +
Sbjct: 235 LLWEIFS 241
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++K+ + IV E+ + L + I Q + L + + NA+A
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYI---AKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
Y H S+ ++H+ ++P I + K+ DF L+ E GT ++
Sbjct: 139 YFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN--AAGTALYM 193
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTG 257
APE D KCD++S G+++ LLTG
Sbjct: 194 APEVFKR-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
SH ++K G C + IV E + N L +++ + EP SQ L + + +
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGM 117
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
A+L S +HR + +D K+ DF ++ + + + + + AP
Sbjct: 118 AFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAP 174
Query: 231 EYINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
E + ++ K DV++FG+L+ V G+ +D E+
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L G ++ +I+ E ++N +L + QN F + L LR IA +
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMK 123
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS------VSIPEGETCVKDKVTGTM 225
YL +HR + I ++ + K+ DF LS S P + + K+ +
Sbjct: 124 YLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI--PI 178
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
+ APE I F DV+S+G+++ +++ G++ +D + D I A
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 226
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 112 HKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIAN 168
H N+++L G C TR P I+ E + L D++ + N+ ++L L +A I++
Sbjct: 314 HPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISS 368
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL + +HR + + E ++ K+ DF LS + + +
Sbjct: 369 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNE 288
APE + F+ K DV++FG+LL + T G Y I+ ++
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIAT------------YGMSPY-------PGIDLSQ 466
Query: 289 FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
E+++ E P EK EL C + DRP+ ++ + + ++Q
Sbjct: 467 VYELLEKDYRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLA 229
YL +HR + I ++ + K+ DF LS + + G + + +
Sbjct: 162 YLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT 256
PE I F DV+S+G++L +++
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+A + +LH S I++R ++P I LDE KL DF LS + E GT+
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTV 194
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
++APE +N + D +S+G+L+ +LTG F
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 16/184 (8%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H NV+ + L +V E ++ L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYH-HDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 141 AD---HIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGY 197
D H N+ + LS + A++YLH ++ ++HR I+ I L
Sbjct: 130 TDIVTHTRMNEEQIATVCLS--------VLRALSYLH---NQGVIHRDIKSDSILLTSDG 178
Query: 198 IAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
KL DF + + E + + GT ++APE I+ + + D++S G++++ ++ G
Sbjct: 179 RIKLSDFGFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 258 QKIF 261
+ +
Sbjct: 238 EPPY 241
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICK 128
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 129 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 127 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 178
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 238
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 239 RIRMGQYEFPNPEWSEVSEEV 259
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 75 KGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPV-IVFE 133
KG E V ++K + ++ D +C L L C +T + V E
Sbjct: 42 KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 101
Query: 134 SVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
V L HI Q EP + A IA + +L S+ I++R ++ + L
Sbjct: 102 YVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVML 154
Query: 194 D-EGYIAKLFDFSL-SVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLL 251
D EG+I K+ DF + +I +G T GT ++APE I + + D ++FG+LL
Sbjct: 155 DSEGHI-KIADFGMCKENIWDGVTT--KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 252 LVLLTGQKIFDPSRGDEI 269
+L GQ F+ DE+
Sbjct: 212 YEMLAGQAPFEGEDEDEL 229
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 177
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 237
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 238 RIRMGQYEFPNPEWSEVSEEV 258
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 179
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 239
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 240 RIRMGQYEFPNPEWSEVSEEV 260
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + +AYL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 118 KVSIAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 172
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA 271
GT ++APE + ++ + D++S G+ L+ L G+ P E+ A
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEA 223
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L V++ E V L D + Q E L + I + +
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVN 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH ++ I H ++P I L + I KL DF L+ I +G + GT F
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 166 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 217
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEV 298
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L V++ E V L D + Q E L + I + +
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVN 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH ++ I H ++P I L + I KL DF L+ I +G + GT F
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 165
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 171
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEV 252
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 172
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 232
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 233 RIRMGQYEFPNPEWSEVSEEV 253
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L V++ E V L D + Q E L + I + +
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVN 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH ++ I H ++P I L + I KL DF L+ I +G + GT F
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVK----NRTLADH------IYQNQPHFEP--LLLSQ 158
H++++K G C + ++VFE +K N+ L H + QP L LSQ
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 159 RLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETC-V 217
L IA IA+ + YL S+ +HR + + + K+ DF +S + + V
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 218 KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ ++ PE I F + DV+SFG++L + T
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 17/190 (8%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 139 TLADHIYQNQPHFEP-----------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIR 187
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 175
Query: 188 PSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFS 246
I L E + K+ DF L+ I + V K + ++APE I + + DV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 247 FGMLLLVLLT 256
FG+LL + +
Sbjct: 236 FGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 165
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 173
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEV 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 70 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 126
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 127 GMEYL--GTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L G ++ +I+ E ++N +L + QN F + L LR IA +
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMK 149
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS------VSIPEGETCVKDKVTGTM 225
YL +HR + I ++ + K+ DF LS S P + + K+ +
Sbjct: 150 YLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI--PI 204
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
+ APE I F DV+S+G+++ +++ G++ +D + D I A
Sbjct: 205 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 252
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K SH N+++L G C + + IV E V+ D + + L + L++ A
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQG---GDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT-MG 226
+ YL S+ +HR + + E + K+ DF +S +G + +
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLL 251
+ APE +N G ++ + DV+SFG+LL
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILL 305
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 172 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 223
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 283
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 284 RIRMGQYEFPNPEWSEVSEEV 304
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L V++ E V L D + Q E L + I + +
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVN 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH ++ I H ++P I L + I KL DF L+ I +G + GT F
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF L+ + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQ-NQPHFEPLLLSQRLRIAVHIANAI 170
H N+++L G C IV E + L D++ + N+ ++L L +A I++A+
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL---LYMATQISSAM 143
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YL + +HR + + E ++ K+ DF LS + + + AP
Sbjct: 144 EYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 200
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLT 256
E + F+ K DV++FG+LL + T
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 173
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEV 254
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 136 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 187
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 247
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 248 RIRMGQYEFPNPEWSEVSEEV 268
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L V++ E V L D + Q E L + I + +
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVN 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH ++ I H ++P I L + I KL DF L+ I +G + GT F
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 125
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 126 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 128
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 129 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 67 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 123
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 124 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 74 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 130
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 131 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 76 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 132
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 133 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 75 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 131
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 132 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 171
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD++S G+++ +LL G F + G I G
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEV 252
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 125
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 126 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 68 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 124
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 125 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 143
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 144 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 143
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 144 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 73 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 129
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 130 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 156
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 157 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K SH N+++L G C + + IV E V+ D + + L + L++ A
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQG---GDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT-MG 226
+ YL S+ +HR + + E + K+ DF +S +G + +
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLL 251
+ APE +N G ++ + DV+SFG+LL
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILL 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G +++ +IV E ++N +L + ++ F + L LR IA+ +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMK 161
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF L + + G + +
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
+PE I F DV+S+G++L +++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG 223
+ +A A H+ + I+HR I+PS I LD KL DF +S + ++ K + G
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRDAG 187
Query: 224 TMGFLAPEYINTG----DFNEKCDVFSFGMLLLVLLTGQ 258
++APE I+ ++ + DV+S G+ L L TG+
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L D++ Q H E + + L+ I
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICK 125
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 126 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 165
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H ++++L G C + + +V + + +L DH+ Q++ P LL L V IA +
Sbjct: 74 HAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLL---LNWGVQIAKGMY 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAP 230
YL ++HR + + L ++ DF ++ + P+ + + + + ++A
Sbjct: 130 YLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLT 256
E I+ G + + DV+S+G+ + L+T
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 187
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 193
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGY 187
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H ++++L G C + + +V + + +L DH+ Q++ P LL L V IA +
Sbjct: 92 HAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLL---LNWGVQIAKGMY 147
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAP 230
YL ++HR + + L ++ DF ++ + P+ + + + + ++A
Sbjct: 148 YLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLT 256
E I+ G + + DV+S+G+ + L+T
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 165
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 225
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 226 SFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 176
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 236
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 237 SFGVLLWEIFS 247
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 13/198 (6%)
Query: 75 KGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPV-IVFE 133
KG E V ++K + ++ D +C L L C +T + V E
Sbjct: 363 KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 422
Query: 134 SVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL 193
V L HI Q EP + A IA + +L S+ I++R ++ + L
Sbjct: 423 YVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVML 475
Query: 194 D-EGYIAKLFDFSL-SVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLL 251
D EG+I K+ DF + +I +G T GT ++APE I + + D ++FG+LL
Sbjct: 476 DSEGHI-KIADFGMCKENIWDGVTT--KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 252 LVLLTGQKIFDPSRGDEI 269
+L GQ F+ DE+
Sbjct: 533 YEMLAGQAPFEGEDEDEL 550
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGY 188
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGY 184
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 211
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 272 SFGVLLWEIFS 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 81 RTVSVMKFND-ILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVF-ESVKNR 138
RTV+V + + H + + + H NV+ L G C + P++V E K
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 139 TLADHIYQNQPHFEP------------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKI 186
L+ ++ + F P L L + + +A + +L SR +HR +
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174
Query: 187 RPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVF 245
I L E + K+ DF L+ I + V K + ++APE I + + DV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 246 SFGMLLLVLLT 256
SFG+LL + +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEP 153
+G E N I H N++ L ++ + V L D I + + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE- 115
Query: 154 LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF---LDEGYIAKLFDFSLSVSI 210
R+ + +A+ YLH I+HR ++P + LDE + DF LS
Sbjct: 116 ---RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 211 PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
E V GT G++APE + +++ D +S G++ +LL G F
Sbjct: 169 -EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 13/235 (5%)
Query: 41 FNPIRGFTIRELEIATNNFDARNVIKDGYAYKFYKGFVEDR-----TVSVMKFNDILNDG 95
F G + R+ EI + I +G ++G V++ + +D
Sbjct: 22 FQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS 81
Query: 96 HEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLL 155
+ F + H +++KL G E + +I+ + TL + Q L
Sbjct: 82 VREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLD 137
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
L+ + A ++ A+AYL S+ +HR I + + KL DF LS + +
Sbjct: 138 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 194
Query: 216 CVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
K + ++APE IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 195 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 249
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L V++ E V L D + Q E L + I + +
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVN 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH ++ I H ++P I L + I KL DF L+ I +G + GT F
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 22/220 (10%)
Query: 49 IRELEIATNNFDARNVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHED--CFNNIIFA 106
++E +I + +I G + Y G ++ DI D + F + A
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVA--IRLIDIERDNEDQLKAFKREVMA 82
Query: 107 SKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHI 166
+ + H+NV+ G C+ I+ K RTL + + + +++ +IA I
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLD---VNKTRQIAQEI 139
Query: 167 ANAIAYLHIGFSRPILHRKIRPSRIFLDEG--YIAKLFDFSLSVSIPEGETCVKDKV-TG 223
+ YLH ++ ILH+ ++ +F D G I FS+S + G K ++ G
Sbjct: 140 VKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNG 196
Query: 224 TMGFLAPEYI---------NTGDFNEKCDVFSFGMLLLVL 254
+ LAPE I + F++ DVF+ G + L
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 13/230 (5%)
Query: 46 GFTIRELEIATNNFDARNVIKDGYAYKFYKGFVEDR-----TVSVMKFNDILNDGHEDCF 100
G + R+ EI + I +G ++G V++ + +D + F
Sbjct: 1 GASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 60
Query: 101 NNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRL 160
+ H +++KL G E + +I+ + TL + Q L L+ +
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLDLASLI 116
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
A ++ A+AYL S+ +HR I + + KL DF LS + + K
Sbjct: 117 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
+ ++APE IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 35/201 (17%)
Query: 112 HKNVLKLTGCCLETRIPVIVFE--------------------SVKNRTLADHIYQNQPHF 151
+ N++KL G C + ++FE S+ + L+ + P
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 152 EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP 211
PL +++L IA +A +AYL R +HR + + E + K+ DF LS +I
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 212 EGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIG 270
+ D + ++ PE I + + DV+++G++L +IF G
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW------EIFSYGLQPYYG 279
Query: 271 AGHYWLLHYVK-----KCIEN 286
H +++YV+ C EN
Sbjct: 280 MAHEEVIYYVRDGNILACPEN 300
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEP 153
+G E N I H N++ L ++ + V L D I + + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE- 115
Query: 154 LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF---LDEGYIAKLFDFSLSVSI 210
R+ + +A+ YLH I+HR ++P + LDE + DF LS
Sbjct: 116 ---RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 211 PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
E V GT G++APE + +++ D +S G++ +LL G F
Sbjct: 169 -EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L G +++ +IV E ++N +L + +N F + L LR I+ +
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMK 138
Query: 172 YLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FL 228
YL +G+ +HR + I ++ + K+ DF LS + + G + +
Sbjct: 139 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE I F DV+S+G+++ +++
Sbjct: 195 APEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEP 153
+G E N I H N++ L ++ + V L D I + + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE- 115
Query: 154 LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF---LDEGYIAKLFDFSLSVSI 210
R+ + +A+ YLH I+HR ++P + LDE + DF LS
Sbjct: 116 ---RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 211 PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
E V GT G++APE + +++ D +S G++ +LL G F
Sbjct: 169 -EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 94 DGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEP 153
+G E N I H N++ L ++ + V L D I + + E
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE- 115
Query: 154 LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIF---LDEGYIAKLFDFSLSVSI 210
R+ + +A+ YLH I+HR ++P + LDE + DF LS
Sbjct: 116 ---RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 211 PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
E V GT G++APE + +++ D +S G++ +LL G F
Sbjct: 169 -EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
I + N+ +Y+H + I HR ++PS I +D+ KL DF E E V K+
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESEYMVDKKI 207
Query: 222 TGTMG---FLAPEYI-NTGDFN-EKCDVFSFGMLLLVLL 255
G+ G F+ PE+ N +N K D++S G+ L V+
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
R V+V K D+ + N + + H NV+++ L ++ E ++ L
Sbjct: 71 RQVAV-KMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + Q + + E Q + + A+AYLH ++ ++HR I+ I L K
Sbjct: 130 TDIVSQVRLNEE-----QIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVK 181
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF I + + + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 182 LSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
Query: 261 F 261
+
Sbjct: 241 Y 241
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 13/230 (5%)
Query: 46 GFTIRELEIATNNFDARNVIKDGYAYKFYKGFVEDR-----TVSVMKFNDILNDGHEDCF 100
G + R+ EI + I +G ++G V++ + +D + F
Sbjct: 4 GSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 63
Query: 101 NNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRL 160
+ H +++KL G E + +I+ + TL + Q L L+ +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLDLASLI 119
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
A ++ A+AYL S+ +HR I + + KL DF LS + + K
Sbjct: 120 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
+ ++APE IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H+NV+++ L +V E ++ L
Sbjct: 55 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + + + E Q + + + A++ LH ++ ++HR I+ I L K
Sbjct: 114 TDIVTHTRMNEE-----QIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 165
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF + + E + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 166 LSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
Query: 261 F 261
+
Sbjct: 225 Y 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H+NV+++ L +V E ++ L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + + + E Q + + + A++ LH ++ ++HR I+ I L K
Sbjct: 105 TDIVTHTRMNEE-----QIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 156
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF + + E + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 157 LSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
Query: 261 F 261
+
Sbjct: 216 Y 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H+NV+++ L +V E ++ L
Sbjct: 57 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + + + E Q + + + A++ LH ++ ++HR I+ I L K
Sbjct: 116 TDIVTHTRMNEE-----QIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 167
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF + + E + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 168 LSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
Query: 261 F 261
+
Sbjct: 227 Y 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L V++ E V L D + + E L + + I + +
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVH 129
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH S+ I H ++P I L + + KL DF ++ I G + GT F
Sbjct: 130 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEF 184
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H+NV+++ L +V E ++ L
Sbjct: 50 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + + + E Q + + + A++ LH ++ ++HR I+ I L K
Sbjct: 109 TDIVTHTRMNEE-----QIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 160
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF + + E + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 161 LSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
Query: 261 F 261
+
Sbjct: 220 Y 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 188
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF + ET
Sbjct: 166 IXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-----KETTSH 217
Query: 219 DKVTG---TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYW 275
+ +T T ++APE + +++ CD +S G++ +LL G F + G I G
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKT 277
Query: 276 LLHYVKKCIENNEFDEIVDPI 296
+ + N E+ E+ + +
Sbjct: 278 RIRXGQYEFPNPEWSEVSEEV 298
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H+NV+++ L +V E ++ L
Sbjct: 100 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + + + E Q + + + A++ LH ++ ++HR I+ I L K
Sbjct: 159 TDIVTHTRMNEE-----QIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 210
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF + + E + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 211 LSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
Query: 261 F 261
+
Sbjct: 270 Y 270
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGY 189
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGY 189
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L V++ E V L D + + E L + + I + +
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVH 143
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH S+ I H ++P I L + + KL DF ++ I G + GT F
Sbjct: 144 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEF 198
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 143 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 192
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG-- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 189
Query: 224 -TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H +++KL ++V E N L D+I Q E + R I
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSE----QEARRFFQQII 123
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H I+HR ++P + LDE K+ DF LS + +G G+ +
Sbjct: 124 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNY 178
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD 262
APE I+ + + DV+S G++L V+L + FD
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 63 NVIKDGYAYKFYKGFV--EDRTVSVMKFNDILNDGHEDCFN------NIIFASKLSSHKN 114
V+ G YKG E TV + ILN+ N +I AS H +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS--MDHPH 101
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLH 174
+++L G CL I +V + + + L +++++++ + LL L V IA + YL
Sbjct: 102 LVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL---LNWCVQIAKGMMYLE 157
Query: 175 IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLAPEY 232
R ++HR + + + K+ DF L+ + EG+ + G M ++A E
Sbjct: 158 ---ERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFD--PSR 265
I+ F + DV+S+G+ + L+T G K +D P+R
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTADEMTGY 189
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H +++KL ++V E N L D+I Q E + R I
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSE----QEARRFFQQII 113
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H I+HR ++P + LDE K+ DF LS + +G G+ +
Sbjct: 114 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNY 168
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD 262
APE I+ + + DV+S G++L V+L + FD
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 193
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H +++KL ++V E N L D+I Q E + R I
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSE----QEARRFFQQII 117
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H I+HR ++P + LDE K+ DF LS + +G G+ +
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNY 172
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD 262
APE I+ + + DV+S G++L V+L + FD
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 187
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG-- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYV 189
Query: 224 -TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 132 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 181
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 155 LLSQRLRIAV-HIANAIAYLHIGFS----RPILHRKIRPSRIFLDEGYIAKLFDFSLSVS 209
L+ +R I V ++A + + +G + +HR + + L + AK+ DF LS +
Sbjct: 100 LVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159
Query: 210 IPEGETCVKDKVTGT--MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRG 266
+ ++ + G + + APE IN F+ + DV+S+G+ + L+ GQK + +G
Sbjct: 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
Query: 267 DEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQGFREL-ALM--CVCE 323
E+ A + +G R+ E + EL ALM C
Sbjct: 220 PEVMA-------------------------FIEQGKRM--ECPPECPPELYALMSDCWIY 252
Query: 324 SAEDRPTTVDVAKRLKQIYQHLA 346
EDRP + V +R++ Y LA
Sbjct: 253 KWEDRPDFLTVEQRMRACYYSLA 275
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + ++ D+++ G ++ L+ G F
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
+L H +++KL ++V E N L D+I Q E + R I
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-LFDYIVQRDKMSE----QEARRFFQQII 122
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H I+HR ++P + LDE K+ DF LS + +G G+ +
Sbjct: 123 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNY 177
Query: 228 LAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIFD 262
APE I+ + + DV+S G++L V+L + FD
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 189
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 205
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 160 LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYI---AKLFDFSLSVSIPEGETC 216
+R+ I + YLH I+H ++P I L Y K+ DF +S I G C
Sbjct: 134 IRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHAC 188
Query: 217 VKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
++ GT +LAPE +N D+++ G++ +LLT F
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 202
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 201
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 202
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 194
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L V++ E V L D + + E L + + I + +
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVH 122
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIA----KLFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH S+ I H ++P I L + + KL DF ++ I G + GT F
Sbjct: 123 YLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEF 177
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 201
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGX 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKVT 222
I+ A+ +LH + I++R ++P I L+ KL DF L SI +G V
Sbjct: 128 AEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHXFC 182
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT+ ++APE + N D +S G L+ +LTG F
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKVT 222
I+ A+ +LH + I++R ++P I L+ KL DF L SI +G V
Sbjct: 128 AEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFC 182
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT+ ++APE + N D +S G L+ +LTG F
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 184
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 179
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 131 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 180
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 179
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE 212
PL +Q I I + YLH S +HR I+ + + L E KL DF ++ + +
Sbjct: 115 PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
+ ++ GT ++APE I ++ K D++S G+ + L G+
Sbjct: 172 TQ-IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-----HFE 152
D + + + HKN++ L G C + ++ E L +++ +P F
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 153 P-------LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
P L + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 206 LSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 196 LARDIHHIDX-XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE 212
PL +Q I I + YLH S +HR I+ + + L E KL DF ++ + +
Sbjct: 100 PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 156
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
+ ++ GT ++APE I ++ K D++S G+ + L G+
Sbjct: 157 TQ-IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 187
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE 212
PL +Q I I + YLH S +HR I+ + + L E KL DF ++ + +
Sbjct: 100 PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 156
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
+ ++ GT ++APE I ++ K D++S G+ + L G+
Sbjct: 157 TQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 59 FDARNVIKDGYAYKFYKG-FVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLK 117
F+ ++ +G + YKG V+ ++ +K D+ D E+ I K S H+N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 118 LTGCCLETRIP------VIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
G ++ P +V E ++ D I + + L I I ++
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT--LKEEWIAYICREILRGLS 143
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
+LH ++HR I+ + L E KL DF +S + + ++ GT ++APE
Sbjct: 144 HLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPYWMAPE 199
Query: 232 YI-------NTGDFNEKCDVFSFGMLLLVLLTG 257
I T DF K D++S G+ + + G
Sbjct: 200 VIACDENPDATYDF--KSDLWSLGITAIEMAEG 230
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 178
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 23/215 (10%)
Query: 64 VIKDGYAYKFYKGFV--EDRTVSVMKFNDILNDGHEDCFN------NIIFASKLSSHKNV 115
V+ G YKG E TV + ILN+ N +I AS H ++
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS--MDHPHL 79
Query: 116 LKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHI 175
++L G CL I +V + + + L +++++++ + LL L V IA + YL
Sbjct: 80 VRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLL---LNWCVQIAKGMMYLE- 134
Query: 176 GFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLAPEYI 233
R ++HR + + + K+ DF L+ + EG+ + G M ++A E I
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 234 NTGDFNEKCDVFSFGMLLLVLLT-GQKIFD--PSR 265
+ F + DV+S+G+ + L+T G K +D P+R
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR 226
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Query: 95 GHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPL 154
G E N I + H+N++ L +V + V L D I + + E
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-- 119
Query: 155 LLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIP 211
+ + +A+ YLH I+HR ++P + DE + DF LS
Sbjct: 120 --KDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-- 172
Query: 212 EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
EG+ V GT G++APE + +++ D +S G++ +LL G F
Sbjct: 173 EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE 212
PL +Q I I + YLH S +HR I+ + + L E KL DF ++ + +
Sbjct: 120 PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 176
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
+ ++ GT ++APE I ++ K D++S G+ + L G+
Sbjct: 177 TQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 156 LSQRLRIAVH--------IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS 207
LSQR R H I A+ +LH I++R I+ I LD L DF LS
Sbjct: 150 LSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Query: 208 VSIPEGETCVKDKVTGTMGFLAPEYINTGD--FNEKCDVFSFGMLLLVLLTGQKIF 261
ET GT+ ++AP+ + GD ++ D +S G+L+ LLTG F
Sbjct: 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKV 221
I A+ Y H I+HR ++P + L + KL DF +++ + E +V
Sbjct: 138 QILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV 194
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
GT F+APE + + + DV+ G++L +LL+G
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ A + L S ++HR ++P + LD+ KL DF + + E D GT
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGT 238
Query: 225 MGFLAPEYINT----GDFNEKCDVFSFGMLLLVLLTGQKIF 261
+++PE + + G + +CD +S G+ L +L G F
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 206 LSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 196 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 81 RTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
+ V+V K + E FN ++ H+NV+++ L +V E ++ L
Sbjct: 177 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 141 ADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAK 200
D + + + E Q + + + A++ LH ++ ++HR I+ I L K
Sbjct: 236 TDIVTHTRMNEE-----QIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVK 287
Query: 201 LFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKI 260
L DF + E + + GT ++APE I+ + + D++S G++++ ++ G+
Sbjct: 288 LSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
Query: 261 F 261
+
Sbjct: 347 Y 347
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 155 LLSQRLRIAV-HIANAIAYLHIGFS----RPILHRKIRPSRIFLDEGYIAKLFDFSLSVS 209
L+ +R I V ++A + + +G + +HR + + L + AK+ DF LS +
Sbjct: 426 LVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKA 485
Query: 210 IPEGETCVKDKVTG--TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT-GQKIFDPSRG 266
+ ++ + G + + APE IN F+ + DV+S+G+ + L+ GQK + +G
Sbjct: 486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
Query: 267 DEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQGFREL-ALM--CVCE 323
E+ A + +G R+ E + EL ALM C
Sbjct: 546 PEVMA-------------------------FIEQGKRM--ECPPECPPELYALMSDCWIY 578
Query: 324 SAEDRPTTVDVAKRLKQIYQHLA 346
EDRP + V +R++ Y LA
Sbjct: 579 KWEDRPDFLTVEQRMRACYYSLA 601
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLET--RIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H N++K G C R ++ E + +L +++ Q H E + + L+ I
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICK 128
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG--TMG 226
+ YL G R I HR + I ++ K+ DF L+ +P+ + K K G +
Sbjct: 129 GMEYL--GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ APE + F+ DV+SFG++L L T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 184
Query: 206 LSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 185 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 187
Query: 206 LSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 188 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 206 LSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 196 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
+IAV I A+ +LH S ++HR ++PS + ++ K+ DF +S + + KD
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDI 168
Query: 221 VTGTMGFLAPEYI----NTGDFNEKCDVFSFGMLLLVL 254
G ++APE I N ++ K D++S G+ ++ L
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 180
Query: 206 LSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 181 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G E + +I+ + TL + Q L L+ + A ++ A+A
Sbjct: 67 HPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YL S+ +HR I + + KL DF LS + + K + ++APE
Sbjct: 123 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 232 YINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 13/228 (5%)
Query: 48 TIRELEIATNNFDARNVIKDGYAYKFYKGFVED-----RTVSVMKFNDILNDGHEDCFNN 102
+ R+ EI + I +G ++G V++ + +D + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 103 IIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI 162
+ H +++KL G E + +I+ + TL + Q L L+ +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A ++ A+AYL S+ +HR I + + KL DF LS + + K
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
+ ++APE IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
+H++V+ G + +V E + R+L + + + EP + I
Sbjct: 75 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP----EARYYLRQIVLGC 130
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMGFLA 229
YLH ++HR ++ +FL+E K+ DF L+ + +GE K + GT ++A
Sbjct: 131 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIA 185
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
PE ++ + + DV+S G ++ LL G+ F+ S
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFG 188
Query: 206 LSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 189 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
LS+ A I + +LH S+ I++R ++ I LD+ K+ DF + G+
Sbjct: 118 LSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 174
Query: 216 CVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
++ GT ++APE + +N D +SFG+LL +L GQ F +E+
Sbjct: 175 KT-NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G E + +I+ + TL + Q L L+ + A ++ A+A
Sbjct: 73 HPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YL S+ +HR I + + KL DF LS + + K + ++APE
Sbjct: 129 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 232 YINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 224
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ D+ L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G E + +I+ + TL + Q L L+ + A ++ A+A
Sbjct: 70 HPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YL S+ +HR I + + KL DF LS + + K + ++APE
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 232 YINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
+H++V+ G + +V E + R+L + + + EP R + I
Sbjct: 73 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP---EARYYLR-QIVLGC 128
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMGFLA 229
YLH ++HR ++ +FL+E K+ DF L+ + +GE K + GT ++A
Sbjct: 129 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIA 183
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
PE ++ + + DV+S G ++ LL G+ F+ S
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G E + +I+ + TL + Q L L+ + A ++ A+A
Sbjct: 70 HPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YL S+ +HR I + + KL DF LS + + K + ++APE
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 232 YINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
+H++V+ G + +V E + R+L + + + EP + I
Sbjct: 75 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP----EARYYLRQIVLGC 130
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMGFLA 229
YLH ++HR ++ +FL+E K+ DF L+ + +GE K + GT ++A
Sbjct: 131 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNYIA 185
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
PE ++ + + DV+S G ++ LL G+ F+ S
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQP-------- 149
D + + + HKN++ L G C + ++ E L +++ +P
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 150 --HFEPLLLSQR--LRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
H LS + + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 206 LSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 196 LARDIHHIDY-YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 18/173 (10%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHI---------YQNQ 148
D + + + HKN++ L G C + ++ E L +++ Y
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 149 PHFEP---LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS 205
P P L + A +A + YL S+ +HR + + + E + K+ DF
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFG 236
Query: 206 LSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
L+ I + K G + ++APE + + + DV+SFG+LL + T
Sbjct: 237 LARDIHHID-YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L G + + +I+ E ++N +L + +N F + L LR I + +
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMK 124
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLA 229
YL +HR + I ++ + K+ DF +S + + G + + A
Sbjct: 125 YLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
PE I F DV+S+G+++ +++ G++ +D S D I A
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 225
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
I AI +LH S I HR ++P + ++ + KL DF + E
Sbjct: 137 IGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA---KETTQNALQTPC 190
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
T ++APE + +++ CD++S G+++ +LL G F + G I G + +
Sbjct: 191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250
Query: 283 CIENNEFDEIVD 294
N E+ E+ +
Sbjct: 251 GFPNPEWSEVSE 262
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L G + + +I+ E ++N +L + +N F + L LR I + +
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMK 145
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLA 229
YL +HR + I ++ + K+ DF +S + + G + + A
Sbjct: 146 YLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 202
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
PE I F DV+S+G+++ +++ G++ +D S D I A
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 246
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A I + ++H +R +++R ++P+ I LDE ++ D L+ + +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 223 GTMGFLAPEYINTG-DFNEKCDVFSFGMLLLVLLTGQKIF 261
GT G++APE + G ++ D FS G +L LL G F
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 152 EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP 211
EP+ + + + +A + +L SR +HR + I L E + K+ DF L+ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 212 EGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ V+ T + ++APE I ++ K DV+S+G+LL + +
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
I AI +LH S I HR ++P + ++ + KL DF + +
Sbjct: 118 IGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPC 171
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
T ++APE + +++ CD++S G+++ +LL G F + G I G + +
Sbjct: 172 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 231
Query: 283 CIENNEFDEIVD 294
N E+ E+ +
Sbjct: 232 GFPNPEWSEVSE 243
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A I + ++H +R +++R ++P+ I LDE ++ D L+ + +
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 350
Query: 223 GTMGFLAPEYINTG-DFNEKCDVFSFGMLLLVLLTGQKIF 261
GT G++APE + G ++ D FS G +L LL G F
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++ L G + + +I+ E ++N +L + +N F + L LR I + +
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMK 130
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLA 229
YL +HR + I ++ + K+ DF +S + + G + + A
Sbjct: 131 YLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 230 PEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
PE I F DV+S+G+++ +++ G++ +D S D I A
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLR--IAVHIANA 169
HKN+++ G E I E V +L+ + + + PL +++ I
Sbjct: 78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEG 134
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
+ YLH I+HR I+ + ++ + K+ DF S + C + TGT+ ++
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFTGTLQYM 190
Query: 229 APEYINTG--DFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I+ G + + D++S G ++ + TG+ F
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLR--IAVHIANA 169
HKN+++ G E I E V +L+ + + + PL +++ I
Sbjct: 64 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEG 120
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
+ YLH I+HR I+ + ++ + K+ DF S + C + TGT+ ++
Sbjct: 121 LKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFTGTLQYM 176
Query: 229 APEYINTG--DFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I+ G + + D++S G ++ + TG+ F
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A I + ++H +R +++R ++P+ I LDE ++ D L+ + +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 223 GTMGFLAPEYINTG-DFNEKCDVFSFGMLLLVLLTGQKIF 261
GT G++APE + G ++ D FS G +L LL G F
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A I + ++H +R +++R ++P+ I LDE ++ D L+ + +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---V 351
Query: 223 GTMGFLAPEYINTG-DFNEKCDVFSFGMLLLVLLTGQKIF 261
GT G++APE + G ++ D FS G +L LL G F
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 97 EDCFNNIIFASKLSSHKNVLKLTGCCLETRIP--VIVFESVKNRTLADHIYQNQPHFEPL 154
E + I KL H NV+KL + +VFE V + + P +PL
Sbjct: 81 EQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPL 134
Query: 155 LLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
Q + I YLH + I+HR I+PS + + E K+ DF +S +G
Sbjct: 135 SEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGS 190
Query: 215 TCVKDKVTGTMGFLAPEYINTGD--FNEKC-DVFSFGMLLLVLLTGQ 258
+ GT F+APE ++ F+ K DV++ G+ L + GQ
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 112 HKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H N+++L G +E + + IV E + +L D++ L L+ ++ + A+
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAM 121
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YL +HR + + + E +AK+ DF L+ + K V T AP
Sbjct: 122 EYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----AP 174
Query: 231 EYINTGDFNEKCDVFSFGMLL 251
E + F+ K DV+SFG+LL
Sbjct: 175 EALREAAFSTKSDVWSFGILL 195
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
A+ +LH S ++HR I+ I L KL DF I E + ++ GT +
Sbjct: 127 QALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSEMVGTPYW 182
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE + + K D++S G++ + ++ G+ +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNE 240
++HR ++ +FL+E K+ DF L+ + E + K + GT ++APE ++ +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 241 KCDVFSFGMLLLVLLTGQKIFDPS 264
+ DV+S G ++ LL G+ F+ S
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
LS+ A I + +LH S+ I++R ++ I LD+ K+ DF + G+
Sbjct: 117 LSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173
Query: 216 CVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
+ GT ++APE + +N D +SFG+LL +L GQ F +E+
Sbjct: 174 KT-NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++TG
Sbjct: 162 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGY 211
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N D++S G ++ LLTG+ +F
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVY 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH S I H ++P I L + + K + DF L+ I G + GT F
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAF 183
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 17/223 (7%)
Query: 54 IATNNFDARNVIKDGYAYKFYKGFVEDR----TVSVMKFNDILNDGHEDCFNNIIFASKL 109
+ +NF+ V+ G K V++ V V+K + IL D +C L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 110 SSHKNVLKLTGCCLETRIPVI-VFESVKNRTLADHIYQNQPHFEPLLLSQRLRI-AVHIA 167
+ + L CC +T + V E V L HI +++ E R R A I
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDE-----ARARFYAAEII 134
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKVTGTMG 226
+A+ +LH + I++R ++ + LD KL DF + I G T GT
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT--FCGTPD 189
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
++APE + + D ++ G+LL +L G F+ D++
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMG 226
+ YLH + ++HR ++ +FL++ K+ DF L+ I +GE K + GT
Sbjct: 137 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 191
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
++APE + + + D++S G +L LL G+ F+ S
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 116 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 114 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 144 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 126
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 181
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 115 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++ G
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 113 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D + D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 120 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++ G
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 126
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 181
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
+H++V+ G + +V E + R+L + + + EP + I
Sbjct: 97 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP----EARYYLRQIVLGC 152
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YLH ++HR ++ +FL+E K+ DF L+ + E + K + GT ++AP
Sbjct: 153 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAP 208
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
E ++ + + DV+S G ++ LL G+ F+ S
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 112 HKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H N+++L G +E + + IV E + +L D++ L L+ ++ + A+
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAM 130
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YL +HR + + + E +AK+ DF L+ + K V T AP
Sbjct: 131 EYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----AP 183
Query: 231 EYINTGDFNEKCDVFSFGMLL 251
E + F+ K DV+SFG+LL
Sbjct: 184 EALREKKFSTKSDVWSFGILL 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMG 226
+ YLH + ++HR ++ +FL++ K+ DF L+ I +GE K + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCGTPN 207
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
++APE + + + D++S G +L LL G+ F+ S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G E + +I+ + TL + Q L L+ + A ++ A+A
Sbjct: 450 HPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YL S+ +HR I + + KL DF LS + + K + ++APE
Sbjct: 506 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 232 YINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 601
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKV 221
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 135 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMG 226
+ YLH + ++HR ++ +FL++ K+ DF L+ I +GE K + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPN 207
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
++APE + + + D++S G +L LL G+ F+ S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
A+ +LH S ++HR I+ I L KL DF I E + + GT +
Sbjct: 128 QALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYW 183
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE + + K D++S G++ + ++ G+ +
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I + YLH S +HR I+ + + L E KL DF ++ + + + ++ GT
Sbjct: 128 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNTFVGT 183
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
++APE I ++ K D++S G+ + L G+
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP-EGETCVKDKVTGTMG 226
+ YLH + ++HR ++ +FL++ K+ DF L+ I +GE K + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 207
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
++APE + + + D++S G +L LL G+ F+ S
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 91 ILNDGHEDCFNNIIFASKLSS--HKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQN 147
I ND F + AS ++ H N+++L G +E + + IV E + +L D++
Sbjct: 37 IKNDATAQAF--LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 94
Query: 148 QPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS 207
L L+ ++ + A+ YL +HR + + + E +AK+ DF L+
Sbjct: 95 GRSV--LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Query: 208 VSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLL 251
+ K V T APE + F+ K DV+SFG+LL
Sbjct: 150 KEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILL 189
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K+ G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDI-NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
+H++V+ G + +V E + R+L + + + EP + I
Sbjct: 99 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP----EARYYLRQIVLGC 154
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
YLH ++HR ++ +FL+E K+ DF L+ + E + K + GT ++AP
Sbjct: 155 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAP 210
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
E ++ + + DV+S G ++ LL G+ F+ S
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGETCVKDKVT 222
I +A+ YLH + I+HR ++P I L+E ++ DF + V PE + +
Sbjct: 142 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +++PE + + D+++ G ++ L+ G F
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++ G
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGY 205
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G + +I+ E ++N L + N F + L LR IA+ +
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMR 130
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG----- 226
YL +HR + I ++ + K+ DF LS + E + T ++G
Sbjct: 131 YLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS--DPTYTSSLGGKIPI 185
Query: 227 -FLAPEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
+ APE I F D +S+G+++ +++ G++ +D S D I A
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINA 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
A+ +LH S ++HR I+ I L KL DF I E + + GT +
Sbjct: 127 QALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMVGTPYW 182
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE + + K D++S G++ + ++ G+ +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
A+ +LH S ++HR I+ I L KL DF I E + + GT +
Sbjct: 127 QALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYW 182
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE + + K D++S G++ + ++ G+ +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++ G
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGX 202
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ DF L+ D++ G
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGF 178
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 91 ILNDGHEDCFNNIIFASKLSS--HKNVLKLTGCCLETRIPV-IVFESVKNRTLADHIYQN 147
I ND F + AS ++ H N+++L G +E + + IV E + +L D++
Sbjct: 224 IKNDATAQAF--LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 281
Query: 148 QPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS 207
L L+ ++ + A+ YL +HR + + + E +AK+ DF L+
Sbjct: 282 GRSV--LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Query: 208 VSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDP 263
+ K V T APE + F+ K DV+SFG+LL + + ++ P
Sbjct: 337 KEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 388
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFS----LSVSIPEGETCVKD 219
V I A+ ++H R ILHR I+ IFL + +L DF L+ ++ C+
Sbjct: 132 VQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-- 186
Query: 220 KVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
GT +L+PE +N K D+++ G +L L T + F+
Sbjct: 187 ---GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 135 VKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLD 194
VK++ L+D Q L+ Q LR + Y+H S I+HR ++PS + ++
Sbjct: 123 VKSQALSDEHVQ-------FLVYQLLR-------GLKYIH---SAGIIHRDLKPSNVAVN 165
Query: 195 EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLV 253
E ++ DF L+ E T T + APE +N +N+ D++S G ++
Sbjct: 166 EDSELRILDFGLARQADEEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 254 LLTGQKIFDPS 264
LL G+ +F S
Sbjct: 222 LLQGKALFPGS 232
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
A+ +LH S ++HR I+ I L KL DF I E + + GT +
Sbjct: 128 QALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMVGTPYW 183
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE + + K D++S G++ + ++ G+ +
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
+IAV I A+ +LH S ++HR ++PS + ++ K+ DF +S + ++ K
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI 212
Query: 221 VTGTMGFLAPEYINT----GDFNEKCDVFSFGMLLLVL 254
G ++APE IN ++ K D++S G+ ++ L
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 135 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 189
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
GT +++PE + ++ + D++S G+ L+ + G+ P E+
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 156 ISDGATM--KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 104 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 160
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 161 ISDGATM--KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I + K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDX-XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 156 ISDGATM--KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 142 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 196
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 153 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 207
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 247
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 146 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 200
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 13/228 (5%)
Query: 48 TIRELEIATNNFDARNVIKDGYAYKFYKGFVED-----RTVSVMKFNDILNDGHEDCFNN 102
+ R+ EI + I +G ++G V++ + +D + F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 103 IIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI 162
+ H +++KL G E + +I+ + TL + Q L L+ +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
A ++ A+AYL S+ +HR I + + KL DF LS + + K
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
+ ++APE IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 146 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 200
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 240
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G E + +I+ + TL + Q L L+ + A ++ A+A
Sbjct: 450 HPHIVKLIGVITENPVWIIM----ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
YL S+ +HR I + + KL DF LS + + K + ++APE
Sbjct: 506 YLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 232 YINTGDFNEKCDVFSFGMLLL-VLLTGQKIFDPSRGDEI 269
IN F DV+ FG+ + +L+ G K F + +++
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 601
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 170 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 224
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
GT +++PE + ++ + D++S G+ L+ + G+ P E+
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 168 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 222
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 162 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 216
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 256
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I + K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDX-XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 135 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 189
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 138 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 192
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVY 128
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMGF 227
YLH S I H ++P I L + + K + DF L+ I G + GT F
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEF 183
Query: 228 LAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+APE +N + D++S G++ +LL+G F
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 156 ISDGATM--KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 139 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 193
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 233
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 147 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 201
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N+++L G + +I+ E ++N L + N F + L LR IA+ +
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMR 132
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG----- 226
YL +HR + I ++ + K+ DF LS + E + + T ++G
Sbjct: 133 YLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE--TSSLGGKIPI 187
Query: 227 -FLAPEYINTGDFNEKCDVFSFGMLLLVLLT-GQK-IFDPSRGDEIGA 271
+ APE I F D +S+G+++ +++ G++ +D S D I A
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINA 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 102 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 158
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 159 ISDGATM--KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 162
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
GT +++PE + ++ + D++S G+ L+ + G+ P E+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 162
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
GT +++PE + ++ + D++S G+ L+ + G+ P E+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 162
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
GT +++PE + ++ + D++S G+ L+ + G+ P E+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 168 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 222
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 262
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 156 ISDGATM--KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 108 KLSSHKNVLKLTGC-CLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI-AVH 165
+ S+H ++ L C E+R+ V E V L H+ + + L + R +
Sbjct: 108 QASNHPFLVGLHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAE 161
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSL-SVSIPEGETCVKDKVTG 223
I+ A+ YLH R I++R ++ + LD EG+I KL D+ + + G+T G
Sbjct: 162 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDTT--STFCG 215
Query: 224 TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
T ++APE + D+ D ++ G+L+ ++ G+ FD
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 174
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 175 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 233
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 234 FGVLMWEIFT 243
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 152 EPLLLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVS 209
E + +R R I +A+ YLH SR +++R I+ + LD+ K+ DF L
Sbjct: 99 ERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155
Query: 210 IPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
I +G T GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 156 ISDGATM--KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTA 172
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 173 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 231
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 232 FGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 177
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 178 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 236
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 237 FGVLMWEIFT 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ + + Y+H S I+HR ++PS + ++E ++ DF L+ E T
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG----Y 188
Query: 222 TGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
T + APE +N +N+ D++S G ++ LL G+ +F S
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 162
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
GT +++PE + ++ + D++S G+ L+ + G+ P E+
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI-AVHI 166
+ S+H ++ L C V E V L H+ + + L + R + I
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEI 130
Query: 167 ANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSL-SVSIPEGETCVKDKVTGT 224
+ A+ YLH R I++R ++ + LD EG+I KL D+ + + G+T GT
Sbjct: 131 SLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDTT--SXFCGT 184
Query: 225 MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
++APE + D+ D ++ G+L+ ++ G+ FD
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV---- 221
+ + YLH +HR ++ I L E ++ DF +S + G ++KV
Sbjct: 130 VLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 222 TGTMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYV 280
GT ++APE + ++ K D++SFG+ + L TG + Y + +
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH----------KYPPMKVL 236
Query: 281 KKCIENNEFDEIVDPIIVSEGPRVGK--EKQLQGFRELALMCVCESAEDRPTTVDV 334
++N DP + G + + +K + FR++ +C+ + E RPT ++
Sbjct: 237 MLTLQN-------DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF L+ + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGLAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 108 KLSSHKNVLKLTGCC-LETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI-AVH 165
+ S+H ++ L C E+R+ V E V L H+ + + L + R +
Sbjct: 65 QASNHPFLVGLHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAE 118
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSL-SVSIPEGETCVKDKVTG 223
I+ A+ YLH R I++R ++ + LD EG+I KL D+ + + G+T G
Sbjct: 119 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDTT--SXFCG 172
Query: 224 TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
T ++APE + D+ D ++ G+L+ ++ G+ FD
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 134 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 188
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 170 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 224
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 264
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ A + L S +HR ++P + LD+ KL DF + + + D GT
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 225 MGFLAPEYINT----GDFNEKCDVFSFGMLLLVLLTGQKIF 261
+++PE + + G + +CD +S G+ L +L G F
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV---- 221
+ + YLH +HR ++ I L E ++ DF +S + G ++KV
Sbjct: 125 VLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 222 TGTMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYV 280
GT ++APE + ++ K D++SFG+ + L TG + Y + +
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH----------KYPPMKVL 231
Query: 281 KKCIENNEFDEIVDPIIVSEGPRVGK--EKQLQGFRELALMCVCESAEDRPTTVDV 334
++N DP + G + + +K + FR++ +C+ + E RPT ++
Sbjct: 232 MLTLQN-------DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ A + L S +HR ++P + LD+ KL DF + + + D GT
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 225 MGFLAPEYINT----GDFNEKCDVFSFGMLLLVLLTGQKIF 261
+++PE + + G + +CD +S G+ L +L G F
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 172 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 226
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 266
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 97 EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFE---P 153
+ N I K H+N++ L T +V + V L D I + + E
Sbjct: 50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS 109
Query: 154 LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSI 210
L++ Q L +A+ YLH I+HR ++P + +E + DF LS
Sbjct: 110 LVIQQVL-------SAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159
Query: 211 PEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
G + GT G++APE + +++ D +S G++ +LL G F
Sbjct: 160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
++AY+H S I HR I+P + LD + + KL DF + + GE V + +
Sbjct: 213 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYY 267
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
APE I D+ DV+S G +L LL GQ IF G
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG 307
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ D L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ A + L S +HR ++P + LD+ KL DF + + + D GT
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 225 MGFLAPEYINT----GDFNEKCDVFSFGMLLLVLLTGQKIF 261
+++PE + + G + +CD +S G+ L +L G F
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 108 KLSSHKNVLKLTGCC-LETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRI-AVH 165
+ S+H ++ L C E+R+ V E V L H+ + + L + R +
Sbjct: 61 QASNHPFLVGLHSCFQTESRL-FFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAE 114
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSL-SVSIPEGETCVKDKVTG 223
I+ A+ YLH R I++R ++ + LD EG+I KL D+ + + G+T G
Sbjct: 115 ISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDTT--SXFCG 168
Query: 224 TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
T ++APE + D+ D ++ G+L+ ++ G+ FD
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 155 LLSQRLRI-AVHIANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIPE 212
L R R A IA+A+ YLH S I++R ++P I LD +G+I L DF L E
Sbjct: 136 FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIE 191
Query: 213 GETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ GT +LAPE ++ ++ D + G +L +L G F
Sbjct: 192 HNSTT-STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ F L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 111 SHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAI 170
H NV+ L +++ E V L D + + E L + I N +
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGV 127
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAK----LFDFSLSVSIPEGETCVKDKVTGTMG 226
YLH S I H ++P I L + + K + DF L+ I G + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPE 182
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
F+APE +N + D++S G++ +LL+G F
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+A+LH S+ ++H ++P+ IFL KL DF L V + G + G ++
Sbjct: 169 ALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL--GTAGAGEVQEGDPRYM 223
Query: 229 APEYINTGDFNEKCDVFSFGMLLL 252
APE + G + DVFS G+ +L
Sbjct: 224 APELLQ-GSYGTAADVFSLGLTIL 246
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 108 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 162
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
GT +++PE + ++ + D++S G+ L+ + G+ P E
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ + + Y+H S I+HR ++PS + ++E ++ DF L+ E T
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTG----Y 180
Query: 222 TGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
T + APE +N +N+ D++S G ++ LL G+ +F S
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SKL+ H+N+++ G L++ I+ E + L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 193
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 254 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 289
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 290 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ D L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 111 SHKNVLKLTGCCLETRI-----PVIVFESVKNRTLADHIYQNQPHFEP--LLLSQRLRIA 163
SH NV++L G C+E P+++ +K L ++ ++ P + L L+
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG 223
V IA + YL +R LHR + L + + DF LS I G+ + ++
Sbjct: 154 VDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 224 T-MGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLH 278
+ ++A E + + K DV++FG+ + + T + P G + + +LLH
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLH 264
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 231
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMG--FLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 232 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 291 FGVLMWEIFT 300
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I +A+ Y H F I+HR ++ + LD K+ DF S G D+ G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DEFCGS 175
Query: 225 MGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHY 279
+ APE ++ + DV+S G++L L++G FD E+ G Y + Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 280 VKKCIEN 286
+ EN
Sbjct: 236 MSTDCEN 242
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG- 223
I + Y+H S I+HR ++PS + ++E K+ D L+ D++TG
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA-------RHTDDEMTGY 182
Query: 224 --TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N +N+ D++S G ++ LLTG+ +F
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SKL+ H+N+++ G L++ I+ E + L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGP 179
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 240 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 275
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 28/175 (16%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
I I + YLH S +HR I+ + + L E KL DF ++ + + + ++
Sbjct: 121 ILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNXF 176
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVK 281
GT ++APE I ++ K D++S G+ + L G+ P D LH ++
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE----PPNSD---------LHPMR 223
Query: 282 KCIENNEFDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAK 336
+I P + + + F+E C+ + RPT ++ K
Sbjct: 224 VLF-----------LIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ E L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + ++ DF L+ I K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMRIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 182 LHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINT-----G 236
+HR I+P I +D +L DF + + E T GT +++PE + G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 237 DFNEKCDVFSFGMLLLVLLTGQKIF 261
+ +CD +S G+ + +L G+ F
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I +A+ Y H F I+HR ++ + LD K+ DF S G D G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGS 175
Query: 225 MGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHY 279
+ APE ++ + DV+S G++L L++G FD E+ G Y + Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 280 VKKCIEN 286
+ EN
Sbjct: 236 MSTDCEN 242
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I +A+ Y H F I+HR ++ + LD K+ DF S G D G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGS 175
Query: 225 MGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHY 279
+ APE ++ + DV+S G++L L++G FD E+ G Y + Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 280 VKKCIEN 286
+ EN
Sbjct: 236 MSTDCEN 242
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I +A+ Y H F I+HR ++ + LD K+ DF S G D G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGS 175
Query: 225 MGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHY 279
+ APE ++ + DV+S G++L L++G FD E+ G Y + Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 280 VKKCIEN 286
+ EN
Sbjct: 236 MSTDCEN 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-KVADFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF L+ + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-QVTDFGLAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-KVADFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-KVADFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + +
Sbjct: 127 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANS 181
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
GT +++PE + ++ + D++S G+ L+ + G+
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-KVADFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K+ +H N++KL + +V E + D++ + E R + I
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK---EARAKFR-QIV 116
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H F I+HR ++ + LD K+ DF S G D G+ +
Sbjct: 117 SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGSPPY 171
Query: 228 LAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHYVKK 282
APE ++ + DV+S G++L L++G FD E+ G Y + Y+
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 231
Query: 283 CIEN 286
EN
Sbjct: 232 DCEN 235
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 10/150 (6%)
Query: 111 SHKNVLKLTGCCLETR-IPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANA 169
+H NVL L G L +P ++ + + L I P P + + + +A
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTV-KDLISFGLQVARG 136
Query: 170 IAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK---VTGTMG 226
+ YL + +HR + LDE + K+ DF L+ I + E + +
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 227 FLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ A E + T F K DV+SFG+LL LLT
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +DE GYI ++ DF + + +G T +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYI-QVTDFGFAKRV-KGRTWX---L 185
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI K+ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-KVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQ------------------- 148
K +H +V+KL G C + +++ E K +L + +++
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 149 -PHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS 207
P L + + A I+ + YL ++HR + I + EG K+ DF LS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 208 VSIPEGETCVKDKVTG--TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ E ++ VK + G + ++A E + + + DV+SFG+LL ++T
Sbjct: 198 RDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 140 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 138 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 129 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLS 157
D F I K H N+++L + +V E L + + + E S
Sbjct: 51 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE----S 106
Query: 158 QRLRIAVHIANAIAYLHIGFSRPILHRKIRPSR-IFLDEGYIA--KLFDFSLSVSIPEGE 214
RI + +A+AY H + HR ++P +FL + + KL DF L+ G+
Sbjct: 107 DAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163
Query: 215 TCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
++ KV GT +++P+ + G + +CD +S G+++ VLL G F E+
Sbjct: 164 -MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV 215
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQ------------------- 148
K +H +V+KL G C + +++ E K +L + +++
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 149 -PHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS 207
P L + + A I+ + YL ++HR + I + EG K+ DF LS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 208 VSIPEGETCVKDKVTG--TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ E ++ VK + G + ++A E + + + DV+SFG+LL ++T
Sbjct: 198 RDVYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + L+ K+ DF L+ V+ P+ + T +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
+IAV I A+ +LH S ++HR ++PS + ++ K DF +S + + KD
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDI 195
Query: 221 VTGTMGFLAPEYINT----GDFNEKCDVFSFGMLLLVL 254
G + APE IN ++ K D++S G+ + L
Sbjct: 196 DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I +A+ Y H F I+HR ++ + LD K+ DF S G D G
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DAFCGA 175
Query: 225 MGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHY 279
+ APE ++ + DV+S G++L L++G FD E+ G Y + Y
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 280 VKKCIEN 286
+ EN
Sbjct: 236 MSTDCEN 242
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
I +A+ Y H F I+HR ++ + LD K+ DF S G D G
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL--DAFCGA 175
Query: 225 MGFLAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
+ APE ++ + DV+S G++L L++G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 98 DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLS 157
D F I K H N+++L + +V E L + + + E S
Sbjct: 68 DRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE----S 123
Query: 158 QRLRIAVHIANAIAYLHIGFSRPILHRKIRPSR-IFLDEGYIA--KLFDFSLSVSIPEGE 214
RI + +A+AY H + HR ++P +FL + + KL DF L+ G+
Sbjct: 124 DAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 180
Query: 215 TCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
++ KV GT +++P+ + G + +CD +S G+++ VLL G F E+
Sbjct: 181 -MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 193
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 254 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 289
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 290 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQ------------------- 148
K +H +V+KL G C + +++ E K +L + +++
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 149 -PHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS 207
P L + + A I+ + YL ++HR + I + EG K+ DF LS
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 208 VSIPEGETCVKDKVTG--TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ E ++ VK + G + ++A E + + + DV+SFG+LL ++T
Sbjct: 198 RDVYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS-VSIPEGE-TCVKDKVT 222
I + Y+H S +LHR ++PS + ++ K+ DF L+ ++ PE + T +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE +N+ + + D++S G +L +L+ + IF
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKV 221
I A+ Y H I+HR ++P + L + KL F +++ + E +V
Sbjct: 138 QILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 194
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
GT F+APE + + + DV+ G++L +LL+G
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 179
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 180 GRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 240 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 275
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 121
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 178
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 239 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 274
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G +E I+ E L ++ +N+ + L L + ++ I A+A
Sbjct: 68 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL---VLYSLQICKAMA 123
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAP 230
YL S +HR I I + KL DF LS I E E K VT + +++P
Sbjct: 124 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSP 179
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLT--GQKIFDPSRGDEIGA 271
E IN F DV+ F + + +L+ Q F D IG
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLK 121
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 122 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 178
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 239 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 274
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFL---DEGYIAKLFDFSLSVSIPEGETCVKDKV 221
I A+ Y H I+HR ++P + L + KL F +++ + E +V
Sbjct: 140 QILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV 196
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
GT F+APE + + + DV+ G++L +LL+G
Sbjct: 197 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 170
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 171 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 231 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 266
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 267 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 296
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 185
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 186 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 246 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 281
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 282 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 311
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLK 136
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 193
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 254 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 289
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 290 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGP 179
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 180 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 240 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 275
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 305
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 37/245 (15%)
Query: 112 HKNVLKLTGCCLETR------IPVIVFESVKNRTLADHIYQNQPHFEP--LLLSQRLRIA 163
H +V KL G L +R IP+++ +K+ L + ++ P L L +R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG 223
V IA + YL SR +HR + L E + DF LS I G+ + +
Sbjct: 144 VDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 224 -TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKK 282
+ +LA E + + DV++FG+ + ++T RG AG
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT--------RGQTPYAG---------- 242
Query: 283 CIENNE-FDEIVDPIIVSEGPRVGKEKQLQGFRELALMCVCESAEDRPTTVDVAKRLKQI 341
IEN E ++ ++ + + P +E +L C + RP+ + L+ I
Sbjct: 243 -IENAEIYNYLIGGNRLKQPPECMEE-----VYDLMYQCWSADPKQRPSFTCLRMELENI 296
Query: 342 YQHLA 346
HL+
Sbjct: 297 LGHLS 301
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWT---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G +E I+ E L ++ +N+ + L L + ++ I A+A
Sbjct: 72 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL---VLYSLQICKAMA 127
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAP 230
YL S +HR I I + KL DF LS I E E K VT + +++P
Sbjct: 128 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSP 183
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLT--GQKIFDPSRGDEIGA 271
E IN F DV+ F + + +L+ Q F D IG
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 14/184 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K+ +H N++KL + ++ E + D++ + E S + R I
Sbjct: 66 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFR---QIV 121
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H + I+HR ++ + LD K+ DF S G D G+ +
Sbjct: 122 SAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DTFCGSPPY 176
Query: 228 LAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHYVKK 282
APE ++ + DV+S G++L L++G FD E+ G Y + Y+
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 236
Query: 283 CIEN 286
EN
Sbjct: 237 DCEN 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWT---L 184
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K+ +H N++KL + +V E + D++ + E R + I
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIV 124
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H + I+HR ++ + LD K+ DF S G D G+ +
Sbjct: 125 SAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL--DTFCGSPPY 179
Query: 228 LAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFD 262
APE ++ + DV+S G++L L++G FD
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 182 LHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINT-----G 236
+HR I+P + LD +L DF + + + T GT +++PE + G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 237 DFNEKCDVFSFGMLLLVLLTGQKIF 261
+ +CD +S G+ + +L G+ F
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 195
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 196 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 256 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 291
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 292 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 321
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 37/223 (16%)
Query: 70 AYKFYKGFVEDRT---VSVMKFNDILNDG--HEDCFNNIIFASKLSSHKNVLKLTGCCL- 123
AY ++ RT V+V K D + + F I+ ++LS H+N++ L
Sbjct: 21 AYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA 80
Query: 124 -ETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPIL 182
R +VF+ ++ H EP+ + + + I YLH G +L
Sbjct: 81 DNDRDVYLVFDYMETDL---HAVIRANILEPV---HKQYVVYQLIKVIKYLHSG---GLL 131
Query: 183 HRKIRPSRIFLDEGYIAKLFDFSLSVS----------IP----------EGETCVKDKVT 222
HR ++PS I L+ K+ DF LS S IP + + +
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
T + APE + + + + D++S G +L +L G+ IF S
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 108 KLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIA 167
K+ +H N++KL + ++ E + D++ + E S + R I
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFR---QIV 124
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+A+ Y H + I+HR ++ + LD K+ DF S G D G +
Sbjct: 125 SAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGAPPY 179
Query: 228 LAPEYINTGDFN-EKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGA----GHYWLLHYVKK 282
APE ++ + DV+S G++L L++G FD E+ G Y + Y+
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 239
Query: 283 CIEN 286
EN
Sbjct: 240 DCEN 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
GT +LAPE I + +N+ D ++ G+L+ + G + P DE
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFADE 242
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 182 LHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINT-----G 236
+HR I+P + LD +L DF + + + T GT +++PE + G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 237 DFNEKCDVFSFGMLLLVLLTGQKIF 261
+ +CD +S G+ + +L G+ F
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H +++KL G +E I+ E L ++ +N+ + L L + ++ I A+A
Sbjct: 84 HPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL---VLYSLQICKAMA 139
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAP 230
YL S +HR I I + KL DF LS I E E K VT + +++P
Sbjct: 140 YLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSP 195
Query: 231 EYINTGDFNEKCDVFSFGMLLLVLLT--GQKIFDPSRGDEIGA 271
E IN F DV+ F + + +L+ Q F D IG
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 24/170 (14%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPL-----LLSQRLR 161
H NV++L C +R +VFE V ++ L ++ + P P L+ Q LR
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ +LH I+HR ++P I + G KL DF L+ D V
Sbjct: 124 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPV 171
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF-DPSRGDEIG 270
T+ + APE + + D++S G + + + +F S D++G
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGATWT---L 219
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 19/190 (10%)
Query: 82 TVSV-MKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTL 140
TV+V M +D D + + + HKN++ L G C + ++ L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 141 ADHIYQNQPHF------------EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRP 188
+++ +P E + + +A + YL S+ +HR +
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185
Query: 189 SRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM--GFLAPEYINTGDFNEKCDVFS 246
+ + E + K+ DF L+ I K G + ++APE + + + DV+S
Sbjct: 186 RNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 247 FGMLLLVLLT 256
FG+L+ + T
Sbjct: 245 FGVLMWEIFT 254
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 142 DHIYQNQPH-FEP--LLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P +P L + L +A IA YL +HR I L
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGP 205
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 206 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 266 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 301
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 302 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 331
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 193
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 199
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 191
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 219
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 191
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK 220
++++ + + YL I+HR ++PS I ++ KL DF +S + + + ++
Sbjct: 111 KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANE 165
Query: 221 VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQ 258
GT +++PE + ++ + D++S G+ L+ + G+
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 219
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
A+ YL ++ I+HR ++P I LDE + DF+++ +P ET + + GT ++
Sbjct: 127 ALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQIT-TMAGTKPYM 181
Query: 229 APEYINT---GDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE ++ ++ D +S G+ LL G++ +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 196
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 197 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 257 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 292
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 293 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 322
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 83 VSVMKFNDILNDGHE-DCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLA 141
V+V ++ ++ E D + SK + H+N+++ G L++ I+ E + L
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 142 DHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---DE 195
+ + +P L + L +A IA YL +HR I L
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGP 219
Query: 196 GYIAKLFDFSLSVSIPEGETCVKDKVTG-TMGFLAPEYINTGDFNEKCDVFSFGMLLLVL 254
G +AK+ DF ++ I K + ++ PE G F K D +SFG+LL +
Sbjct: 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 255 LTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDEIVDPIIVSEGPRVGKEKQLQG-F 313
+ + PS+ ++ E+++ V+ G R+ K G
Sbjct: 280 FSLGYMPYPSKSNQ----------------------EVLE--FVTSGGRMDPPKNCPGPV 315
Query: 314 RELALMCVCESAEDRPTTVDVAKRLKQIYQ 343
+ C EDRP + +R++ Q
Sbjct: 316 YRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
+ YLH F R I HR I+ I L+ AKL DF ++ + + ++ V GT ++
Sbjct: 137 GLEYLH--FMRKI-HRDIKAGNILLNTEGHAKLADFGVAGQLTD-XMAKRNXVIGTPFWM 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I +N D++S G+ + + G+ +
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
+V E + + L D + Q H L S+ L + I + YL SR +HR +
Sbjct: 87 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAAR 140
Query: 190 RIFLDEGYIAKLFDFSLSVSIP--EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSF 247
I ++ K+ DF L+ +P + V++ + + APE ++ F+ + DV+SF
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 248 GMLLLVLLT 256
G++L L T
Sbjct: 201 GVVLYELFT 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 107 SKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHF-----EPLLLSQRL- 160
S L +H N++ L G C +++ E L + + + + F P ++
Sbjct: 99 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 161 --------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP- 211
+ +A +A+L S+ +HR + I L G I K+ DF L+ I
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 212 EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ VK + ++APE I + + DV+S+G+ L L +
Sbjct: 216 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 107 SKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHF-----EPLLLSQRL- 160
S L +H N++ L G C +++ E L + + + + F P ++
Sbjct: 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 161 --------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP- 211
+ +A +A+L S+ +HR + I L G I K+ DF L+ I
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 212 EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ VK + ++APE I + + DV+S+G+ L L +
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G+++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G+++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 107 SKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHF-----EPLLLSQRL- 160
S L +H N++ L G C +++ E L + + + + F P ++
Sbjct: 97 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 161 --------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP- 211
+ +A +A+L S+ +HR + I L G I K+ DF L+ I
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 212 EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ VK + ++APE I + + DV+S+G+ L L +
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 107 SKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHF-----EPLLLSQRL- 160
S L +H N++ L G C +++ E L + + + + F P ++
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 161 --------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP- 211
+ +A +A+L S+ +HR + I L G I K+ DF L+ I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 212 EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ VK + ++APE I + + DV+S+G+ L L +
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 65 IKDGYAYKFYKGFVE--DRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCC 122
+ + ++ + +KG + D V V+K D D FN ++ SH NVL + G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRD-FNEECPRLRIFSHPNVLPVLGAC 76
Query: 123 LETRI--PVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRP 180
P ++ + +L + +++ + SQ ++ A+ +A +A+LH P
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFV--VDQSQAVKFALDMARGMAFLHT--LEP 132
Query: 181 ILHRKIRPSR-IFLDEGYIAK--LFDFSLSVSIPEGETCVKDKVTGTM---GFLAPEYIN 234
++ R SR + +DE A+ + D S P G M ++APE +
Sbjct: 133 LIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-----------GRMYAPAWVAPEALQ 181
Query: 235 TG--DFNEK-CDVFSFGMLLLVLLTGQKIFDPSRGDEIG 270
D N + D++SF +LL L+T + F EIG
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD GT+
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD GT+
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 107 SKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHF-----EPLLLSQRL- 160
S L +H N++ L G C +++ E L + + + + F P ++
Sbjct: 104 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 161 --------RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIP- 211
+ +A +A+L S+ +HR + I L G I K+ DF L+ I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 212 EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLT 256
+ VK + ++APE I + + DV+S+G+ L L +
Sbjct: 221 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD GT+
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 177
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 178 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD GT+
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD GT+
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 173
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 174 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD GT+
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
+V E + + L D + Q H L S+ L + I + YL SR +HR +
Sbjct: 103 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAAR 156
Query: 190 RIFLDEGYIAKLFDFSLSVSIP--EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSF 247
I ++ K+ DF L+ +P + V++ + + APE ++ F+ + DV+SF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 248 GMLLLVLLT 256
G++L L T
Sbjct: 217 GVVLYELFT 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLS--VSIPEGETCVKDKVTG 223
I + YLH S ILHR + S + L K+ DF L+ + +P + + G
Sbjct: 121 IITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCG 174
Query: 224 TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFD 262
T +++PE + DV+S G + LL G+ FD
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
+V E + + L D + Q H L S+ L + I + YL SR +HR +
Sbjct: 90 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAAR 143
Query: 190 RIFLDEGYIAKLFDFSLSVSIP--EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSF 247
I ++ K+ DF L+ +P + V++ + + APE ++ F+ + DV+SF
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 248 GMLLLVLLT 256
G++L L T
Sbjct: 204 GVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
+V E + + L D + Q H L S+ L + I + YL SR +HR +
Sbjct: 91 LVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAAR 144
Query: 190 RIFLDEGYIAKLFDFSLSVSIP--EGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSF 247
I ++ K+ DF L+ +P + V++ + + APE ++ F+ + DV+SF
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 248 GMLLLVLLT 256
G++L L T
Sbjct: 205 GVVLYELFT 213
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL--SVSIPEGETCVKDKVT 222
+ +AY H + +LHR ++P + ++E KL DF L + SIP T D
Sbjct: 108 QLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDNEV 161
Query: 223 GTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
T+ + P+ + + D++ + D++ G + + TG+ +F S +E
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKV 221
I +A+ YLH + +++R ++ + LD+ K+ DF L I +G T
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTF 312
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKV 221
I +A+ YLH + +++R ++ + LD+ K+ DF L I +G T
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTF 309
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT LAPE I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ VKD GT+
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVN 193
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE-GYIAKLFDFSLSVSIPEGETCVKDKV 221
A I YLH S +++R ++P + +D+ GYI ++ DF + + +G T +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRV-KGRTWX---L 198
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAP I + +N+ D ++ G+L+ + G F
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPL-----LLSQRLR 161
H NV++L C +R +VFE V ++ L ++ + P P L+ Q LR
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ +LH I+HR ++P I + G KL DF L+ I + + V
Sbjct: 124 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALAPVV 172
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF-DPSRGDEIG 270
T+ + APE + + D++S G + + + +F S D++G
Sbjct: 173 V-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE 212
PL SQ + +A+ YLH I+HR ++ I KL DF +S
Sbjct: 104 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 160
Query: 213 GETCVKDKVTGTMGFLAPEYI---NTGD--FNEKCDVFSFGMLLL 252
+D GT ++APE + + D ++ K DV+S G+ L+
Sbjct: 161 TXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLI 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKV 221
I +A+ YLH + +++R ++ + LD+ K+ DF L I +G T
Sbjct: 114 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXF 169
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 35/243 (14%)
Query: 59 FDARNVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIF------------- 105
F VI D Y F + E S + + L+DGH I+
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEG-GFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREA 77
Query: 106 -ASKLSSHKNVLKLTGCCLETRI----PVIVFESVKNRTLADHIYQNQPHFEPLLLSQRL 160
+L +H N+L+L CL R ++ K TL + I + + L Q L
Sbjct: 78 DMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQIL 137
Query: 161 RIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL-DEGY-----IAKLFDFSLSVSIPEGE 214
+ + I + +H ++ HR ++P+ I L DEG + + + V
Sbjct: 138 WLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
Query: 215 TCVKDKVTG--TMGFLAPEYINTGD---FNEKCDVFSFGMLLLVLLTGQKIFDP--SRGD 267
++D T+ + APE + +E+ DV+S G +L ++ G+ +D +GD
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
Query: 268 EIG 270
+
Sbjct: 255 SVA 257
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKV 221
I +A+ YLH + +++R ++ + LD+ K+ DF L I +G T
Sbjct: 116 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXF 171
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 163 AVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL-SVSIPEGETCVKDKV 221
I +A+ YLH + +++R ++ + LD+ K+ DF L I +G T
Sbjct: 115 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXF 170
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +LAPE + D+ D + G+++ ++ G+ F
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSI-PEG---ETCVKDKVT 222
+ YLH SR ILH ++ + L +G A L DF +V + P+G + D +
Sbjct: 177 EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP 233
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
GT +APE + + K DV+S ++L +L G
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPL-----LLSQRLR 161
H NV++L C +R +VFE V ++ L ++ + P P L+ Q LR
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ +LH I+HR ++P I + G KL DF L+ I + + V
Sbjct: 132 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALTPVV 180
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF-DPSRGDEIG 270
T+ + APE + + D++S G + + + +F S D++G
Sbjct: 181 V-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 229
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 135 VKNRTLADHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRI 191
V+ ++L+D + P + + L L + + +A + +L SR +HR + I
Sbjct: 166 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 222
Query: 192 FLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
L E + K+ DF L+ I + V K + ++APE I + + DV+SFG+L
Sbjct: 223 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 282
Query: 251 LLVLLT 256
L + +
Sbjct: 283 LWEIFS 288
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 135 VKNRTLADHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRI 191
V+ ++L+D + P + + L L + + +A + +L SR +HR + I
Sbjct: 175 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 231
Query: 192 FLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
L E + K+ DF L+ I + V K + ++APE I + + DV+SFG+L
Sbjct: 232 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 291
Query: 251 LLVLLT 256
L + +
Sbjct: 292 LWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 135 VKNRTLADHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRI 191
V+ ++L+D + P + + L L + + +A + +L SR +HR + I
Sbjct: 173 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 229
Query: 192 FLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
L E + K+ DF L+ I + V K + ++APE I + + DV+SFG+L
Sbjct: 230 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 289
Query: 251 LLVLLT 256
L + +
Sbjct: 290 LWEIFS 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 135 VKNRTLADHIYQNQP---HFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRI 191
V+ ++L+D + P + + L L + + +A + +L SR +HR + I
Sbjct: 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 224
Query: 192 FLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEYINTGDFNEKCDVFSFGML 250
L E + K+ DF L+ I + V K + ++APE I + + DV+SFG+L
Sbjct: 225 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 284
Query: 251 LLVLLT 256
L + +
Sbjct: 285 LWEIFS 290
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 165 HIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGY-IAKLFDFSLSVSIPEGETCVKDKVT 222
+ ++AY+H IG I HR I+P + LD + KL DF + + GE V
Sbjct: 149 QLLRSLAYIHSIG----ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV--SXI 202
Query: 223 GTMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG 266
+ + APE I ++ D++S G ++ L+ GQ +F G
Sbjct: 203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 15/221 (6%)
Query: 55 ATNNFDARNVIKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSS--- 111
+++ F + +G YKG + V V ++ D E + I L
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYV-ALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKN---RTLADHIYQNQPHFEPLLLSQRLRIAVHIAN 168
H+N+++L +VFE + N + + N P L L + + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLLQ 119
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
+A+ H ILHR ++P + +++ KL DF L+ + +V T+ +
Sbjct: 120 GLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYR 175
Query: 229 APEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
AP+ + + ++ D++S G +L ++TG+ +F P DE
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF-PGTNDE 215
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ + + Y+H S ++HR ++P + ++E K+ DF L+ ++
Sbjct: 149 LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEM 198
Query: 222 TG---TMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
TG T + APE I + +N+ D++S G ++ +LTG+ +F
Sbjct: 199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-PEGETCVKDKVTGTMG 226
N + +H I+H ++P+ + +G + KL DF ++ + P+ + VKD G +
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVN 221
Query: 227 FLAPEYINTGDFNEK-----------CDVFSFGMLLLVLLTGQKIF 261
++ PE I + + DV+S G +L + G+ F
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ + + Y+H S ++HR ++P + ++E K+ DF L+ ++
Sbjct: 131 LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEM 180
Query: 222 TG---TMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
TG T + APE I + +N+ D++S G ++ +LTG+ +F
Sbjct: 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYR 194
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ ++ G +F
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSI-PEG---ETCVKDKVT 222
+ YLH SR ILH ++ + L +G A L DF +V + P+G D +
Sbjct: 196 EGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIP 252
Query: 223 GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTG 257
GT +APE + + K DV+S ++L +L G
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 97 EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLL 156
E+ N I ++L H N+++L V+V E V L D I + L
Sbjct: 131 EEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL-- 187
Query: 157 SQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL--DEGYIAKLFDFSLSVSIPEGE 214
+ I I ++H + ILH ++P I + K+ DF L+ E
Sbjct: 188 -DTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 215 TCVKDKVT-GTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGH 273
K KV GT FLAPE +N + D++S G++ +LL+G F +G
Sbjct: 244 ---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF-------LGDND 293
Query: 274 YWLLHYVKKC---IENNEFDEI 292
L+ + C +E+ EF +I
Sbjct: 294 AETLNNILACRWDLEDEEFQDI 315
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + + T +
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRYYR 190
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
APE I + E D++S G ++ L+ G IF
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 228
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVC-HKILFPGR 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPL-----LLSQRLR 161
H NV++L C +R +VFE V ++ L ++ + P P L+ Q LR
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ +LH I+HR ++P I + G KL DF L+ I + + V
Sbjct: 124 -------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALFPVV 172
Query: 222 TGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF-DPSRGDEIG 270
T+ + APE + + D++S G + + + +F S D++G
Sbjct: 173 V-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 185
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 228
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 183 HRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKC 242
HR ++P I + A L DF ++ + + + GT+ + APE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 243 DVFSFGMLLLVLLTGQKIFDPSRGDEI 269
D+++ +L LTG P +GD++
Sbjct: 217 DIYALTCVLYECLTGSP---PYQGDQL 240
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 228
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 104 IFASKLSSHKNVLKLT-----GCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQ 158
IF++ H+N+L+ G LE + +I K +L D++ N + ++
Sbjct: 60 IFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKG-SLTDYLKGNI-----ITWNE 113
Query: 159 RLRIAVHIANAIAYLHI--------GFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI 210
+A ++ ++YLH G I HR + + L A L DF L+V
Sbjct: 114 LCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF 173
Query: 211 ----PEGETCVKDKVTGTMGFLAPEYINTG-----DFNEKCDVFSFGMLLLVLLTGQKIF 261
P G+T + GT ++APE + D + D+++ G++L L++ K
Sbjct: 174 EPGKPPGDTHGQ---VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAA 230
Query: 262 D 262
D
Sbjct: 231 D 231
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 168 NAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGF 227
+ YLH + ILHR ++P+ + LDE + KL DF L+ S +V T +
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWY 178
Query: 228 LAPEYI-NTGDFNEKCDVFSFGMLLLVLL 255
APE + + D+++ G +L LL
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 266
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 185
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 181 ILHRKIRPSRIFLD--EGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDF 238
I+H I+P I + + K+ DF L+ + E + T T F APE ++
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--IVKVTTATAEFAAPEIVDREPV 227
Query: 239 NEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLHYVKKCIENNEFDE 291
D+++ G+L VLL+G F G L VK+C + EFDE
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPF-------AGEDDLETLQNVKRC--DWEFDE 271
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 229
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 266
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 229
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 228
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 191
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGR 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYR 192
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVC-HKILFPGR 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKV 221
+ + + Y+H + I+HR ++P + ++E K+ DF L+ + ++ + V
Sbjct: 133 LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXV 186
Query: 222 TGTMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIFDPS 264
T + APE I N + + D++S G ++ ++TG+ +F S
Sbjct: 187 V-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVC-HKILFPGR 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 162 IAVHIANAIAYLH-------IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
IA +A +AYLH G I HR I+ + L A + DF L++ G+
Sbjct: 126 IAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 215 TCVKDK-VTGTMGFLAPEYINTG-----DFNEKCDVFSFGMLLLVLLT 256
+ GT ++APE + D + D+++ G++L L +
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
H N++ L R +VFE ++ + L + +N+ + +++I ++ + +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQ----DSQIKIYLYQLLRGV 132
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
A+ H ILHR ++P + ++ KL DF L+ + +V T+ + AP
Sbjct: 133 AHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAP 188
Query: 231 EYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + + ++ D++S G + ++TG+ +F
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFL 228
I +LH S I+HR ++PS I + K+ DF L+ + G + + T +
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 197
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
APE I + E D++S G ++ ++ KI P R
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVC-HKILFPGR 233
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
H N++ L R +VFE ++ + L + +N+ + +++I ++ + +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQ----DSQIKIYLYQLLRGV 132
Query: 171 AYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAP 230
A+ H ILHR ++P + ++ KL DF L+ + +V T+ + AP
Sbjct: 133 AHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAP 188
Query: 231 EYI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + + ++ D++S G + ++TG+ +F
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 160 LRIAVHIANAIAYLHIGF----SRP-ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
LRI + IA+ +A+LHI +P I HR ++ I + + + D L+V +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 215 TCV---KDKVTGTMGFLAPEYINTG------DFNEKCDVFSFGMLL 251
+ + GT ++APE ++ D ++ D+++FG++L
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 65 IKDGYAYKFYKGFVE--DRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCC 122
+ + ++ + +KG + D V V+K D D FN ++ SH NVL + G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRD-FNEECPRLRIFSHPNVLPVLGAC 76
Query: 123 LETRI--PVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRP 180
P ++ +L + +++ + SQ ++ A+ A A+LH P
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFV--VDQSQAVKFALDXARGXAFLHT--LEP 132
Query: 181 ILHRKIRPSR-IFLDEGYIAKL--FDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTG- 236
++ R SR + +DE A++ D S P G ++APE +
Sbjct: 133 LIPRHALNSRSVXIDEDXTARISXADVKFSFQSP-GRXYAP-------AWVAPEALQKKP 184
Query: 237 -DFNEK-CDVFSFGMLLLVLLTGQKIFDPSRGDEIG 270
D N + D +SF +LL L+T + F EIG
Sbjct: 185 EDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIG 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 160 LRIAVHIANAIAYLHIGF----SRP-ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
LRI + IA+ +A+LHI +P I HR ++ I + + + D L+V +
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 215 TCV---KDKVTGTMGFLAPEYINTG------DFNEKCDVFSFGMLL 251
+ + GT ++APE ++ D ++ D+++FG++L
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 160 LRIAVHIANAIAYLHIGF----SRP-ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGE 214
LRI + IA+ +A+LHI +P I HR ++ I + + + D L+V +
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 215 TCV---KDKVTGTMGFLAPEYINTG------DFNEKCDVFSFGMLL 251
+ + GT ++APE ++ D ++ D+++FG++L
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 115 VLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRL-RIAVHIANAIAYL 173
V +L G CL + + +V + + L DH+ +N+ L SQ L + IA ++YL
Sbjct: 81 VSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGR----LGSQDLLNWCMQIAKGMSYL 135
Query: 174 HIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV-KDKVTGTMGFLAPEY 232
++HR + + + K+ DF L+ + ET D + ++A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 233 INTGDFNEKCDVFSFGMLLLVLLT-GQKIFD--PSR 265
I F + DV+S+G+ + L+T G K +D P+R
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 152 EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI- 210
+PL L + + Y+H S ++HR ++PS + ++E K+ DF ++ +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 211 --PEGETCVKDKVTGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
P + T + APE ++ ++ + D++S G + +L +++F
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 152 EPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI- 210
+PL L + + Y+H S ++HR ++PS + ++E K+ DF ++ +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 211 --PEGETCVKDKVTGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
P + T + APE ++ ++ + D++S G + +L +++F
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 29/138 (21%)
Query: 162 IAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDE---GYIAKLFDFSLSVSIPEGETCVK 218
I I AI YLH S I HR ++P + I KL DF +
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----------- 167
Query: 219 DKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDEIGAGHYWLLH 278
+ TG +++ CD++S G+++ +LL G F + G I G +
Sbjct: 168 KETTGE------------KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 215
Query: 279 YVKKCIENNEFDEIVDPI 296
+ N E+ E+ + +
Sbjct: 216 MGQYEFPNPEWSEVSEEV 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 200 KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
KL DF L+ + + + VK TGT F APE D++S G+L +LL+G
Sbjct: 297 KLIDFGLTAHL-DPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 354
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIEN 286
F DE L VK C N
Sbjct: 355 PFGGENDDET-------LRNVKSCDWN 374
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSI---------PEGETCVKDKVTGTMGFLAPE 231
++HR ++PS + ++ K+ DF L+ I P G+ + T + APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 232 -YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
+ + ++ DV+S G +L L + IF P R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF-PGR 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 200 KLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQK 259
KL DF L+ + + + VK TGT F APE D++S G+L +LL+G
Sbjct: 191 KLIDFGLTAHL-DPKQSVK-VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 248
Query: 260 IFDPSRGDEIGAGHYWLLHYVKKCIEN 286
F DE L VK C N
Sbjct: 249 PFGGENDDET-------LRNVKSCDWN 268
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL + V+VFE + ++ L + + E + L + + N IA
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIA 114
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y H R +LHR ++P + ++ K+ DF L+ + +V T+ + AP+
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPD 170
Query: 232 YI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + ++ D++S G + ++ G +F
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL + V+VFE + ++ L + + E + L + + N IA
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIA 114
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y H R +LHR ++P + ++ K+ DF L+ + +V T+ + AP+
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPD 170
Query: 232 YI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + ++ D++S G + ++ G +F
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSI---------PEGETCVKDKVTGTMGFLAPE 231
++HR ++PS + ++ K+ DF L+ I P G+ + T + APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 232 -YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
+ + ++ DV+S G +L L + IF P R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF-PGR 226
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
IVFE + T D I +N F P L ++A I ++ +LH S + H ++P
Sbjct: 94 IVFELLGLSTY-DFIKENG--FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPE 147
Query: 190 RIFL-----DEGYIAKLFDFSLSVSIPE------GETCVKDK----VTGTMGFLAPEYIN 234
I E Y K+ ++ P+ G D+ + T + APE I
Sbjct: 148 NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL 207
Query: 235 TGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+++ CDV+S G +L+ G +F
Sbjct: 208 ALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 182 LHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGD--FN 239
+HR ++P I + + + KL DF + + G + D T + +PE + GD +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFA-RLLTGPSDYYDDEVATRWYRSPELL-VGDTQYG 181
Query: 240 EKCDVFSFGMLLLVLLTGQKIFDPSRGD 267
DV++ G + LL+G ++ P + D
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLW-PGKSD 208
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG---TM 225
I +LH S I+HR ++PS I + K+ DF L+ + C +T T
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART-----ACTNFMMTPYVVTR 189
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ APE I + D++S G ++ L+ G IF
Sbjct: 190 YYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
H N++KL + V+VFE + ++ L + + E + L + + N IA
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQLLNGIA 114
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
Y H R +LHR ++P + ++ K+ DF L+ + ++ T+ + AP+
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPD 170
Query: 232 YI-NTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + ++ D++S G + ++ G +F
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPLLLSQRLR-IAVH 165
H NV++L C +R +VFE V ++ L ++ + EP + ++ ++ +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP---EPGVPTETIKDMMFQ 128
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ + +LH S ++HR ++P I + KL DF L+ I + + V T+
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVV-TL 183
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-DEIG 270
+ APE + + D++S G + + + +F S D++G
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPLLLSQRLR-IAVH 165
H NV++L C +R +VFE V ++ L ++ + EP + ++ ++ +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP---EPGVPTETIKDMMFQ 128
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ + +LH S ++HR ++P I + KL DF L+ I + + V T+
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVV-TL 183
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-DEIG 270
+ APE + + D++S G + + + +F S D++G
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI---PEGETCVKDKV 221
+ + + YLH S+ I+H+ I+P + L G K+ ++ ++ +TC +
Sbjct: 117 QLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ- 172
Query: 222 TGTMGFLAPEYINTGDFNE--KCDVFSFGMLLLVLLTGQKIFDPSRGDEI 269
G+ F PE N D K D++S G+ L + TG P GD I
Sbjct: 173 -GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG---LYPFEGDNI 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 112 HKNVLKLTGCCLETRIP-----VIVFESVKNRTLADHIYQNQPHFEPLLLSQRLR-IAVH 165
H NV++L C +R +VFE V ++ L ++ + EP + ++ ++ +
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVP---EPGVPTETIKDMMFQ 128
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTM 225
+ + +LH S ++HR ++P I + KL DF L+ I + + V T+
Sbjct: 129 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVV-TL 183
Query: 226 GFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRG-DEIG 270
+ APE + + D++S G + + + +F S D++G
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ YL + + I+HR I+ I + E + KL DF + + G+ GT
Sbjct: 138 QLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY--TFCGT 192
Query: 225 MGFLAPEYINTGDF-NEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + + + +++S G+ L L+ + F
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
IVFE + T D I +N F P L ++A I ++ +LH S + H ++P
Sbjct: 94 IVFELLGLSTY-DFIKENG--FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPE 147
Query: 190 RIFL-----DEGYIAKLFDFSLSVSIPE------GETCVKDKVTGTM----GFLAPEYIN 234
I E Y K+ ++ P+ G D+ T+ + APE I
Sbjct: 148 NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVIL 207
Query: 235 TGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+++ CDV+S G +L+ G +F
Sbjct: 208 ALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 181 ILHRKIRPSRIFLDEGYIAKLFDFSLSVSI---------PEGETCVKDKVTGTMGFLAPE 231
++HR ++PS + ++ K+ DF L+ I P G+ + T + APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 232 -YINTGDFNEKCDVFSFGMLLLVLLTGQKIFDPSR 265
+ + ++ DV+S G +L L + IF P R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF-PGR 226
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 104 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 152
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 153 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 209
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 210 SLDMWSLGCMLASMIFRKEPF 230
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 105 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 153
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 154 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 210
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 211 SLDMWSLGCMLASMIFRKEPF 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++ L + +R P +VFE V N T +YQ L +R ++ I A+
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKAL 144
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S I+HR ++P + +D E +L D+ L+ P E V+ + F
Sbjct: 145 DYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFK 198
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ ++ D++S G +L ++ ++ F
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 105 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 153
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 154 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 210
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 211 SLDMWSLGCMLASMIFRKEPF 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N T +YQ L +R ++ I A+ Y H S I+H
Sbjct: 111 SRTPALVFEHVNN-TDFKQLYQT-------LTDYDIRFYMYEILKALDYCH---SMGIMH 159
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 160 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 216
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 217 SLDMWSLGCMLASMIFRKEPF 237
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 81/203 (39%), Gaps = 21/203 (10%)
Query: 65 IKDGYAYKFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLE 124
+ G + ++G +V+V F+ D I+ + L H N+L +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSS--RDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 125 TRIPVIVFESVKNRTLADHIYQ--NQPHFEPLLLSQRLRIAVHIANAIAYLHIGF----S 178
+R + + +Y + EP L LR+AV A +A+LH+
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA---LRLAVSAACGLAHLHVEIFGTQG 130
Query: 179 RP-ILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCV---KDKVTGTMGFLAP---- 230
+P I HR + + + + D L+V +G + + GT ++AP
Sbjct: 131 KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLD 190
Query: 231 EYINTGDFN--EKCDVFSFGMLL 251
E I T F + D+++FG++L
Sbjct: 191 EQIRTDCFESYKWTDIWAFGLVL 213
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 109 LSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIA-VH-I 166
++ H+N+L L V++FE + + + I N FE L++R ++ VH +
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFISGLDIFERI--NTSAFE---LNEREIVSYVHQV 111
Query: 167 ANAIAYLHIGFSRPILHRKIRPSRIFLD--EGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
A+ +LH S I H IRP I K+ +F + + G+
Sbjct: 112 CEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF-------R 161
Query: 225 MGFLAPEY----INTGDF-NEKCDVFSFGMLLLVLLTG 257
+ F APEY ++ D + D++S G L+ VLL+G
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 107 SKLSSHKNVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV 164
L N++KL + ++ P ++FE V N P L +R +
Sbjct: 80 QNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYI 131
Query: 165 H-IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKV 221
+ + A+ Y H S+ I+HR ++P + +D E +L D+ L+ P E V+
Sbjct: 132 YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--- 185
Query: 222 TGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ F PE ++ D++ D++S G + ++ ++ F
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 109 LSSHKNVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH- 165
L N++KL + ++ P ++FE V N P L +R ++
Sbjct: 83 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYE 134
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTG 223
+ A+ Y H S+ I+HR ++P + +D E +L D+ L+ P E V+
Sbjct: 135 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VA 188
Query: 224 TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ F PE ++ D++ D++S G + ++ ++ F
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 109 LSSHKNVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH- 165
L N++KL + ++ P ++FE V N P L +R ++
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYE 133
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTG 223
+ A+ Y H S+ I+HR ++P + +D E +L D+ L+ P E V+
Sbjct: 134 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VA 187
Query: 224 TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ F PE ++ D++ D++S G + ++ ++ F
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P ++FE V N P L +R ++ + A+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYELLKAL 138
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D E +L D+ L+ P E V+ + F
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFK 192
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ D++ D++S G + ++ ++ F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P ++FE V N P L +R ++ + A+
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYELLKAL 140
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D E +L D+ L+ P E V+ + F
Sbjct: 141 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFK 194
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ D++ D++S G + ++ ++ F
Sbjct: 195 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P ++FE V N P L +R ++ + A+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYELLKAL 138
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D E +L D+ L+ P E V+ + F
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFK 192
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ D++ D++S G + ++ ++ F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 107 SKLSSHKNVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAV 164
L N++KL + ++ P ++FE V N P L +R +
Sbjct: 80 QNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYI 131
Query: 165 H-IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKV 221
+ + A+ Y H S+ I+HR ++P + +D E +L D+ L+ P E V+
Sbjct: 132 YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR--- 185
Query: 222 TGTMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ F PE ++ D++ D++S G + ++ ++ F
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P ++FE V N P L +R ++ + A+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYELLKAL 138
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D E +L D+ L+ P E V+ + F
Sbjct: 139 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFK 192
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ D++ D++S G + ++ ++ F
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P ++FE V N P L +R ++ + A+
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYELLKAL 139
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D E +L D+ L+ P E V+ + F
Sbjct: 140 DYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VASRYFK 193
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ D++ D++S G + ++ ++ F
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 109 LSSHKNVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH- 165
L N++KL + ++ P ++FE V N P L +R ++
Sbjct: 103 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV--------LYPTLTDYDIRYYIYE 154
Query: 166 IANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTG 223
+ A+ Y H S+ I+HR ++P + +D E +L D+ L+ P E V+
Sbjct: 155 LLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR---VA 208
Query: 224 TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ F PE ++ D++ D++S G + ++ ++ F
Sbjct: 209 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P +VFE + N T +YQ +L +R ++ + A+
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINN-TDFKQLYQ-------ILTDFDIRFYMYELLKAL 150
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D + +L D+ L+ P E V+ + F
Sbjct: 151 DYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR---VASRYFK 204
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ ++ D++S G +L ++ ++ F
Sbjct: 205 GPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 114 NVLKLTGCCLE--TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAI 170
N++KL + ++ P +VFE + N T +YQ +L +R ++ + A+
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINN-TDFKQLYQ-------ILTDFDIRFYMYELLKAL 145
Query: 171 AYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFL 228
Y H S+ I+HR ++P + +D + +L D+ L+ P E V+ + F
Sbjct: 146 DYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR---VASRYFK 199
Query: 229 APE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
PE ++ ++ D++S G +L ++ ++ F
Sbjct: 200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
LS+ R+ + N + Y+H ILHR ++ + + + + KL DF L+ + +
Sbjct: 124 LSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 216 CVKDKVTG---TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
++ T+ + PE + D+ D++ G ++ + T I
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
LS+ R+ + N + Y+H ILHR ++ + + + + KL DF L+ + +
Sbjct: 124 LSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 216 CVKDKVTG---TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
++ T+ + PE + D+ D++ G ++ + T I
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
LS+ R+ + N + Y+H ILHR ++ + + + + KL DF L+ + +
Sbjct: 124 LSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 216 CVKDKVTG---TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
++ T+ + PE + D+ D++ G ++ + T I
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 72 KFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIV 131
K Y ED + + ND N + N I KL H N G + V+V
Sbjct: 56 KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL--KLLDHFNHKGPNGVHV-----VMV 108
Query: 132 FESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRI 191
FE + LA I + + PL+ ++ I+ + + Y+H I+H I+P +
Sbjct: 109 FEVLGENLLA-LIKKYEHRGIPLIYVKQ--ISKQLLLGLDYMHRRCG--IIHTDIKPENV 163
Query: 192 FLDEGYIAKLFDFSLSVSIPE-GETCVKDK----VTGTMGFLAPEYINTGDFNEKCDVFS 246
++ I + + + I + G C D+ T + +PE + + D++S
Sbjct: 164 LME---IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 220
Query: 247 FGMLLLVLLTGQKIFDPSRG 266
L+ L+TG +F+P G
Sbjct: 221 TACLIFELITGDFLFEPDEG 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 164 VHIANAIAYLH-IGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVT 222
I AI +H +G+ +HR I+P I LD +L DF + + T
Sbjct: 169 AEIVMAIDSVHRLGY----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 223 GTMGFLAPEYINT-------GDFNEKCDVFSFGMLLLVLLTGQKIF 261
GT +L+PE + G + +CD ++ G+ + GQ F
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 72 KFYKGFVEDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIV 131
K Y ED + + ND N + N I KL H N G + V+V
Sbjct: 56 KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL--KLLDHFNHKGPNGVHV-----VMV 108
Query: 132 FESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRI 191
FE + LA I + + PL+ ++ I+ + + Y+H I+H I+P +
Sbjct: 109 FEVLGENLLA-LIKKYEHRGIPLIYVKQ--ISKQLLLGLDYMHRRCG--IIHTDIKPENV 163
Query: 192 FLDEGYIAKLFDFSLSVSIPE-GETCVKDK----VTGTMGFLAPEYINTGDFNEKCDVFS 246
++ I + + + I + G C D+ T + +PE + + D++S
Sbjct: 164 LME---IVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 220
Query: 247 FGMLLLVLLTGQKIFDPSRG 266
L+ L+TG +F+P G
Sbjct: 221 TACLIFELITGDFLFEPDEG 240
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 156 LSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGET 215
LS+ R+ + N + Y+H ILHR ++ + + + + KL DF L+ + +
Sbjct: 123 LSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 216 CVKDKVTG---TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
++ T+ + PE + D+ D++ G ++ + T I
Sbjct: 180 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVH-IANAIAYLHIGFSRPILH 183
+R P +VFE V N L +R ++ I A+ Y H S I+H
Sbjct: 106 SRTPALVFEHVNNTDFK--------QLRQTLTDYDIRFYMYEILKALDYCH---SMGIMH 154
Query: 184 RKIRPSRIFLD-EGYIAKLFDFSLS-VSIPEGETCVKDKVTGTMGFLAPE-YINTGDFNE 240
R ++P + +D E +L D+ L+ P E V+ + F PE ++ ++
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKGPELLVDYQMYDY 211
Query: 241 KCDVFSFGMLLLVLLTGQKIF 261
D++S G +L ++ ++ F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPF 232
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLD-EGYIAKLFDFSLSVSIP 211
PLL + + Y+H S +LHR ++P+ +F++ E + K+ DF L+ I
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLA-RIM 171
Query: 212 EGETCVKDKVTG---TMGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ K ++ T + +P ++ ++ + D+++ G + +LTG+ +F
Sbjct: 172 DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
IV E V ++L Q P +++ + + I A++YLH S +++ ++P
Sbjct: 161 IVMEYVGGQSLKRSKGQKLP------VAEAIAYLLEILPALSYLH---SIGLVYNDLKPE 211
Query: 190 RIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGM 249
I L E + KL D I + GT GF APE + TG D+++ G
Sbjct: 212 NIMLTEEQL-KLIDLGAVSRI-----NSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGR 264
Query: 250 LLLVL 254
L L
Sbjct: 265 TLAAL 269
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 15/136 (11%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSI-- 210
PL L+I A+ ++H PI+HR ++ + L KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190
Query: 211 -------PEGETCVKDKVT--GTMGFLAPEYINTGD---FNEKCDVFSFGMLLLVLLTGQ 258
+ V++++T T + PE I+ EK D+++ G +L +L Q
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250
Query: 259 KIFDPSRGDEIGAGHY 274
F+ I G Y
Sbjct: 251 HPFEDGAKLRIVNGKY 266
>pdb|2PNW|A Chain A, Crystal Structure Of Membrane-Bound Lytic Murein
Transglycosylase From Agrobacterium Tumefaciens
Length = 380
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 193 LDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYINTGDFNEKCDVFSFGMLLL 252
LD G IA + V + G D++ T G P +I+ D F L+L
Sbjct: 269 LDMGPIA-----AAKVPLVAGRALAVDRLIHTFGL--PFFIHAPTLTHLDDGKPFARLML 321
Query: 253 VLLTGQKIFDPSRGD 267
L TG I P+RGD
Sbjct: 322 ALDTGSAIVGPARGD 336
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 118 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 173
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
I FE + T + + +F+P L +A + +A+ +LH + H ++P
Sbjct: 99 IAFELLGKNTFE---FLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPE 152
Query: 190 RIFLDEGYIAKLFDFSLSV---SIPEGETCVKD------------KVTGTMGFLAPEYIN 234
I L++ S S+ V D + T + PE I
Sbjct: 153 NILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL 212
Query: 235 TGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
+ + CDV+S G +L G +F E
Sbjct: 213 ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 24/119 (20%)
Query: 164 VHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTG 223
+ I A+ YL + H ++P I LD+ Y K V+ + + K TG
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 224 ---------------------TMGFLAPEYINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
T + APE I ++ D++SFG +L L TG +F
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 167
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 165
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 165
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 115 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 170
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
I FE + T + + +F+P L +A + +A+ +LH + H ++P
Sbjct: 108 IAFELLGKNTFE---FLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPE 161
Query: 190 RIFLDEGYIAKLFDFSLSV---SIPEGETCVKD------------KVTGTMGFLAPEYIN 234
I L++ S S+ V D + T + PE I
Sbjct: 162 NILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL 221
Query: 235 TGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
+ + CDV+S G +L G +F E
Sbjct: 222 ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 165
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 165
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 165
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 165
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 118 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 173
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 115 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 170
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 111 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 91 ILNDGH----EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQ 146
+L+ H E F SKLS HK+++ G C+ ++V E VK +L ++ +
Sbjct: 47 VLDKAHRNYSESFFEAASMMSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK 105
Query: 147 NQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---------DEGY 197
N+ L +L +A +A A+ +L ++H + I L + +
Sbjct: 106 NKNCINILW---KLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159
Query: 198 IAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLT 256
I KL D +S+++ KD + + ++ PE I N + N D +SFG L + +
Sbjct: 160 I-KLSDPGISITV-----LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
Query: 257 G 257
G
Sbjct: 214 G 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
HKN+++L + +VFE ++ L + +P ++ L + +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFL---FQLLKGLG 115
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
+ H SR +LHR ++P + ++ KL DF L+ + C +V T+ + P+
Sbjct: 116 FCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 232 YINTGD-FNEKCDVFSFGMLLLVLLTGQKIFDP 263
+ ++ D++S G + L + P
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 113 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 21/154 (13%)
Query: 130 IVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPS 189
I FE + T + + +F+P L +A + +A+ +LH + H ++P
Sbjct: 131 IAFELLGKNTFE---FLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPE 184
Query: 190 RIFLDEGYIAKLFDFSLSV---SIPEGETCVKD------------KVTGTMGFLAPEYIN 234
I L++ S S+ V D + T + PE I
Sbjct: 185 NILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL 244
Query: 235 TGDFNEKCDVFSFGMLLLVLLTGQKIFDPSRGDE 268
+ + CDV+S G +L G +F E
Sbjct: 245 ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 112 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 165 HIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT 224
+ +A+ H S +LHR ++P + ++ KL DF L+ + +V T
Sbjct: 114 QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 225 MGFLAPE-YINTGDFNEKCDVFSFGMLLLVLLTGQKIF 261
+ + APE + ++ D++S G + ++T + +F
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 26/128 (20%)
Query: 153 PLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPE 212
P + Q +A + A+ +LH + H ++P I ++ ++ + ++
Sbjct: 133 PYPIHQVRHMAFQLCQAVKFLH---DNKLTHTDLKPENIL----FVNSDYELTYNLEKKR 185
Query: 213 GETCVKDK-------------------VTGTMGFLAPEYINTGDFNEKCDVFSFGMLLLV 253
E VK + T + APE I +++ CDV+S G ++
Sbjct: 186 DERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245
Query: 254 LLTGQKIF 261
G +F
Sbjct: 246 YYVGFTLF 253
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 178 SRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE-YINTG 236
S +LHR ++P + ++ KL DF L+ + +V T+ + APE +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCK 179
Query: 237 DFNEKCDVFSFGMLLLVLLTGQKIF 261
++ D++S G + ++T + +F
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 27/181 (14%)
Query: 91 ILNDGH----EDCFNNIIFASKLSSHKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQ 146
+L+ H E F SKLS HK+++ G C ++V E VK +L ++ +
Sbjct: 47 VLDKAHRNYSESFFEAASMMSKLS-HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK 105
Query: 147 NQPHFEPLLLSQRLRIAVHIANAIAYLHIGFSRPILHRKIRPSRIFL---------DEGY 197
N+ L +L +A +A A+ +L ++H + I L + +
Sbjct: 106 NKNCINILW---KLEVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159
Query: 198 IAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLT 256
I KL D +S+++ KD + + ++ PE I N + N D +SFG L + +
Sbjct: 160 I-KLSDPGISITV-----LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
Query: 257 G 257
G
Sbjct: 214 G 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 30/115 (26%)
Query: 169 AIAYLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSL--SVSIPEGETC---------- 216
+ Y+H S ILHR ++P+ +++ K+ DF L +V PE
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 217 -----------VKDKVTG---TMGFLAPEYI-NTGDFNEKCDVFSFGMLLLVLLT 256
+K ++TG T + APE I ++ E DV+S G + LL
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 79/208 (37%), Gaps = 29/208 (13%)
Query: 72 KFYKGFV-------EDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLE 124
K YKG + + + V++ D + F + H NV+ L G +
Sbjct: 24 KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 83
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFE------------PLLLSQRLRIAVHIANAIAY 172
+ ++F + L + + PH + L + + IA + Y
Sbjct: 84 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEY 143
Query: 173 LHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT----MGFL 228
L S ++H+ + + + + K+ D L + + K+ G + ++
Sbjct: 144 LS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY---KLLGNSLLPIRWM 197
Query: 229 APEYINTGDFNEKCDVFSFGMLLLVLLT 256
APE I G F+ D++S+G++L + +
Sbjct: 198 APEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 29/203 (14%)
Query: 72 KFYKGFV-------EDRTVSVMKFNDILNDGHEDCFNNIIFASKLSSHKNVLKLTGCCLE 124
K YKG + + + V++ D + F + H NV+ L G +
Sbjct: 41 KVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100
Query: 125 TRIPVIVFESVKNRTLADHIYQNQPHFE------------PLLLSQRLRIAVHIANAIAY 172
+ ++F + L + + PH + L + + IA + Y
Sbjct: 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEY 160
Query: 173 LHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGT----MGFL 228
L S ++H+ + + + + K+ D L + + K+ G + ++
Sbjct: 161 LS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY---KLLGNSLLPIRWM 214
Query: 229 APEYINTGDFNEKCDVFSFGMLL 251
APE I G F+ D++S+G++L
Sbjct: 215 APEAIMYGKFSIDSDIWSYGVVL 237
>pdb|1KIJ|A Chain A, Crystal Structure Of The 43k Atpase Domain Of Thermus
Thermophilus Gyrase B In Complex With Novobiocin
pdb|1KIJ|B Chain B, Crystal Structure Of The 43k Atpase Domain Of Thermus
Thermophilus Gyrase B In Complex With Novobiocin
Length = 390
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 130 IVFESVKNRTLADHIYQNQPH------FEPLLLSQRLRIAVHIANAIAYLHIGFSRPILH 183
+V E+ + +T ++ P F+P + RLR +AYL G
Sbjct: 153 VVGEAPRGKTGTRVTFKPDPEIFGNLRFDPSKIRARLR-------EVAYLVAGLKLVFQD 205
Query: 184 RKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDK---VTGTMGFLAPE--YINTGDF 238
R+ +FLD+G +A S + ++ EGE + +K + GT G + E +++T +
Sbjct: 206 RQHGKEEVFLDKGGVA-----SFAKALAEGEDLLYEKPFLIRGTHGEVEVEVGFLHTQGY 260
Query: 239 NEKCDVFS 246
N + ++
Sbjct: 261 NAEILTYA 268
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 112 HKNVLKLTGCCLETRIPVIVFESVKNRTLADHIYQNQPHFEPLLLSQRLRIAVHIANAIA 171
HKN+++L + +VFE ++ L + +P ++ L + +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFL---FQLLKGLG 115
Query: 172 YLHIGFSRPILHRKIRPSRIFLDEGYIAKLFDFSLSVSIPEGETCVKDKVTGTMGFLAPE 231
+ H SR +LHR ++P + ++ KL +F L+ + C +V T+ + P+
Sbjct: 116 FCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 232 YINTGD-FNEKCDVFSFGMLLLVLL-TGQKIF 261
+ ++ D++S G + L G+ +F
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.142 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,413,398
Number of Sequences: 62578
Number of extensions: 450066
Number of successful extensions: 2893
Number of sequences better than 100.0: 984
Number of HSP's better than 100.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 1802
Number of HSP's gapped (non-prelim): 1040
length of query: 346
length of database: 14,973,337
effective HSP length: 100
effective length of query: 246
effective length of database: 8,715,537
effective search space: 2144022102
effective search space used: 2144022102
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)