Query 045468
Match_columns 221
No_of_seqs 113 out of 1058
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 00:02:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045468.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045468hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zq4_A Ribonuclease J 1, RNAse 100.0 1.6E-47 5.3E-52 348.7 23.3 219 1-219 192-410 (555)
2 3bk2_A RNAse J, metal dependen 100.0 3.4E-40 1.2E-44 301.1 27.0 218 1-219 208-425 (562)
3 2az4_A Hypothetical protein EF 100.0 8.9E-28 3E-32 212.3 15.6 181 1-207 213-412 (429)
4 3af5_A Putative uncharacterize 99.9 5.3E-25 1.8E-29 203.9 15.5 205 1-218 389-638 (651)
5 2ycb_A Beta-CAsp RNAse, cleava 99.9 3.1E-25 1E-29 205.1 12.5 205 1-218 374-623 (636)
6 3zdk_A 5' exonuclease apollo; 99.9 3.4E-26 1.2E-30 196.4 5.5 161 1-204 143-305 (336)
7 2xr1_A Cleavage and polyadenyl 99.9 2.3E-25 8E-30 205.9 11.1 207 1-218 377-627 (640)
8 3iek_A Ribonuclease TTHA0252; 99.8 5.6E-19 1.9E-23 156.3 13.1 197 1-217 183-418 (431)
9 2i7t_A Cleavage and polyadenyl 99.7 4.1E-18 1.4E-22 151.8 11.1 197 1-216 201-436 (459)
10 4b87_A DNA cross-LINK repair 1 99.3 5.6E-12 1.9E-16 109.2 10.6 191 1-216 162-366 (367)
11 2i7x_A Protein CFT2; polyadeny 99.3 7.2E-12 2.5E-16 117.0 8.8 144 1-159 210-386 (717)
12 3rpc_A Possible metal-dependen 90.9 1 3.5E-05 36.0 8.4 44 175-218 202-250 (264)
13 1vjn_A Zn-dependent hydrolase 90.3 0.41 1.4E-05 37.6 5.3 62 133-202 115-176 (220)
14 2i7x_A Protein CFT2; polyadeny 88.0 0.48 1.7E-05 44.1 4.7 47 170-216 656-702 (717)
15 3ju7_A Putative PLP-dependent 86.4 2.4 8.3E-05 35.7 7.9 78 130-217 75-156 (377)
16 3g1p_A Protein PHNP; C-P lyase 85.5 3.2 0.00011 32.9 7.9 68 133-204 156-227 (258)
17 3tcm_A Alanine aminotransferas 84.0 7.3 0.00025 34.1 10.1 98 102-217 159-271 (500)
18 3kl7_A Putative metal-dependen 84.0 0.51 1.7E-05 37.4 2.3 44 174-217 184-227 (235)
19 3isl_A Purine catabolism prote 82.6 6.1 0.00021 32.9 8.8 79 131-217 84-167 (416)
20 1e5d_A Rubredoxin\:oxygen oxid 82.1 21 0.00072 29.8 17.6 82 99-190 303-389 (402)
21 3euc_A Histidinol-phosphate am 80.2 11 0.00037 30.9 9.3 75 131-215 107-189 (367)
22 3nnk_A Ureidoglycine-glyoxylat 77.9 5.2 0.00018 33.3 6.7 79 131-217 86-169 (411)
23 3nra_A Aspartate aminotransfer 75.8 22 0.00076 29.3 10.1 79 131-217 124-213 (407)
24 2z9v_A Aspartate aminotransfer 75.7 12 0.00042 30.7 8.5 79 131-217 81-165 (392)
25 1gd9_A Aspartate aminotransfer 75.2 16 0.00055 30.1 9.1 74 131-217 109-194 (389)
26 2dr1_A PH1308 protein, 386AA l 75.1 15 0.0005 30.1 8.7 78 132-217 94-177 (386)
27 1o69_A Aminotransferase; struc 74.6 17 0.00058 30.2 9.1 77 131-217 70-150 (394)
28 2huf_A Alanine glyoxylate amin 74.0 8.3 0.00028 31.9 6.9 78 132-217 93-175 (393)
29 3fdb_A Beta C-S lyase, putativ 73.2 31 0.0011 28.1 10.3 73 132-217 104-184 (377)
30 3f9t_A TDC, L-tyrosine decarbo 73.2 17 0.00057 29.8 8.6 76 132-217 122-202 (397)
31 3kgw_A Alanine-glyoxylate amin 72.7 9.8 0.00034 31.2 7.1 79 131-217 96-179 (393)
32 3n0l_A Serine hydroxymethyltra 72.4 5 0.00017 33.5 5.2 82 131-217 109-193 (417)
33 3nyt_A Aminotransferase WBPE; 71.8 3.4 0.00011 34.3 3.9 77 131-217 73-151 (367)
34 1zkp_A Hypothetical protein BA 71.2 3 0.0001 33.1 3.3 28 174-201 210-237 (268)
35 2wyl_A L-ascorbate-6-phosphate 70.6 2.9 0.0001 35.1 3.3 27 175-201 257-283 (360)
36 2ch1_A 3-hydroxykynurenine tra 70.0 11 0.00038 31.1 6.8 79 131-217 91-174 (396)
37 2f5t_X Archaeal transcriptiona 69.8 19 0.00066 28.4 7.8 49 16-64 7-55 (233)
38 4dq6_A Putative pyridoxal phos 69.2 18 0.00062 29.6 8.0 77 132-217 113-198 (391)
39 1b9h_A AHBA synthase, protein 69.2 9.3 0.00032 31.6 6.2 77 131-217 76-154 (388)
40 3lmz_A Putative sugar isomeras 68.7 20 0.00069 27.9 7.8 65 147-217 60-127 (257)
41 2bkw_A Alanine-glyoxylate amin 68.5 46 0.0016 27.0 11.2 80 131-217 84-170 (385)
42 3bv6_A Metal-dependent hydrola 67.4 3.7 0.00013 34.8 3.3 27 175-201 282-308 (379)
43 3frk_A QDTB; aminotransferase, 65.7 3.9 0.00013 33.8 3.1 74 131-217 74-152 (373)
44 3p6l_A Sugar phosphate isomera 65.5 40 0.0014 26.1 9.0 65 147-217 62-129 (262)
45 2oga_A Transaminase; PLP-depen 65.1 10 0.00035 31.6 5.7 77 131-217 101-179 (399)
46 2e7j_A SEP-tRNA:Cys-tRNA synth 64.5 22 0.00076 28.8 7.6 78 132-217 92-178 (371)
47 4hvk_A Probable cysteine desul 64.5 5.5 0.00019 32.6 3.7 79 131-217 86-169 (382)
48 3b8x_A WBDK, pyridoxamine 5-ph 63.8 5.9 0.0002 33.0 3.9 78 130-217 77-156 (390)
49 1d2f_A MALY protein; aminotran 63.5 31 0.0011 28.3 8.4 76 132-217 110-196 (390)
50 2e7y_A TRNAse Z; tRNA maturati 63.2 5.3 0.00018 31.6 3.3 29 174-202 219-247 (280)
51 3dzz_A Putative pyridoxal 5'-p 62.8 34 0.0012 27.9 8.4 80 131-217 107-194 (391)
52 2l69_A Rossmann 2X3 fold prote 62.6 23 0.00079 23.9 5.8 15 16-30 34-48 (134)
53 3op7_A Aminotransferase class 62.3 37 0.0013 27.7 8.5 74 131-217 103-188 (375)
54 1mdo_A ARNB aminotransferase; 61.6 14 0.00046 30.5 5.7 77 131-217 77-155 (393)
55 1bw0_A TAT, protein (tyrosine 61.4 17 0.00059 30.2 6.4 73 132-217 127-211 (416)
56 1m32_A 2-aminoethylphosphonate 61.2 51 0.0018 26.4 9.2 78 132-217 79-162 (366)
57 3md7_A Beta-lactamase-like; ss 61.1 6.3 0.00022 31.8 3.4 30 174-203 237-266 (293)
58 3klb_A Putative flavoprotein; 60.3 25 0.00086 25.6 6.4 57 129-191 105-161 (162)
59 4eb5_A Probable cysteine desul 60.3 9.1 0.00031 31.4 4.4 78 132-217 87-169 (382)
60 1u08_A Hypothetical aminotrans 60.0 39 0.0013 27.7 8.3 73 132-217 114-197 (386)
61 3ke3_A Putative serine-pyruvat 59.7 40 0.0014 27.7 8.4 81 132-217 73-169 (379)
62 1eg5_A Aminotransferase; PLP-d 59.7 18 0.0006 29.5 6.0 78 131-216 87-169 (384)
63 3kax_A Aminotransferase, class 59.7 42 0.0014 27.2 8.5 79 131-217 104-190 (383)
64 3h14_A Aminotransferase, class 59.5 27 0.00092 28.7 7.2 71 131-217 113-195 (391)
65 3a2b_A Serine palmitoyltransfe 59.0 42 0.0014 27.6 8.4 72 131-217 125-204 (398)
66 2cbn_A Ribonuclease Z; phospho 58.0 7 0.00024 31.4 3.2 64 132-202 204-274 (306)
67 3ndn_A O-succinylhomoserine su 57.6 39 0.0013 28.6 8.1 75 131-217 118-197 (414)
68 3zrp_A Serine-pyruvate aminotr 57.4 8.2 0.00028 31.6 3.6 79 131-217 75-158 (384)
69 3h3e_A Uncharacterized protein 57.2 35 0.0012 27.4 7.3 76 132-215 171-250 (267)
70 3g0t_A Putative aminotransfera 56.6 24 0.00081 29.6 6.5 75 131-217 129-216 (437)
71 1b5p_A Protein (aspartate amin 56.4 34 0.0011 28.2 7.3 74 131-217 113-198 (385)
72 1y44_A Ribonuclease Z; zinc-de 56.4 7.7 0.00026 31.5 3.2 64 132-202 202-272 (320)
73 3kki_A CAI-1 autoinducer synth 56.3 49 0.0017 27.4 8.4 72 131-217 141-217 (409)
74 4f4e_A Aromatic-amino-acid ami 56.3 21 0.00071 30.0 6.1 75 131-217 141-229 (420)
75 3dr4_A Putative perosamine syn 55.1 7 0.00024 32.5 2.8 77 131-217 94-172 (391)
76 3ecd_A Serine hydroxymethyltra 55.0 33 0.0011 28.4 7.0 80 131-217 116-201 (425)
77 3lvm_A Cysteine desulfurase; s 54.7 19 0.00066 29.9 5.6 78 132-217 112-194 (423)
78 1vjo_A Alanine--glyoxylate ami 54.5 24 0.00083 29.0 6.1 79 131-217 107-190 (393)
79 2w8t_A SPT, serine palmitoyltr 54.4 35 0.0012 28.7 7.2 71 132-217 147-225 (427)
80 1v2d_A Glutamine aminotransfer 54.3 50 0.0017 26.9 8.0 78 132-217 101-186 (381)
81 1yiz_A Kynurenine aminotransfe 54.2 59 0.002 27.0 8.6 78 132-217 124-216 (429)
82 3uwc_A Nucleotide-sugar aminot 52.8 9.3 0.00032 31.4 3.2 76 131-217 76-153 (374)
83 1c7n_A Cystalysin; transferase 52.3 50 0.0017 27.1 7.8 77 132-217 112-198 (399)
84 3dyd_A Tyrosine aminotransfera 51.6 18 0.00063 30.5 4.9 73 132-217 141-225 (427)
85 3qq5_A Small GTP-binding prote 50.8 1E+02 0.0035 26.4 9.5 77 129-218 314-401 (423)
86 1kmj_A Selenocysteine lyase; p 50.5 30 0.001 28.4 6.0 80 131-217 111-195 (406)
87 1xi9_A Putative transaminase; 50.1 45 0.0015 27.6 7.1 74 131-217 123-208 (406)
88 3c8f_A Pyruvate formate-lyase 49.7 81 0.0028 23.8 9.2 76 134-217 71-161 (245)
89 1t3i_A Probable cysteine desul 49.6 35 0.0012 28.1 6.3 80 131-217 116-200 (420)
90 3ihj_A Alanine aminotransferas 49.5 87 0.003 27.1 9.1 72 134-217 182-269 (498)
91 4e5s_A MCCFLIKE protein (BA_56 49.3 37 0.0013 28.2 6.3 74 129-202 8-89 (331)
92 3iab_A Ribonucleases P/MRP pro 49.3 26 0.00087 25.9 4.6 25 32-56 76-100 (158)
93 2fnu_A Aminotransferase; prote 48.8 11 0.00038 30.8 3.0 77 130-217 71-149 (375)
94 2o0r_A RV0858C (N-succinyldiam 48.4 76 0.0026 26.2 8.3 78 132-217 109-194 (411)
95 3hvy_A Cystathionine beta-lyas 48.3 40 0.0014 28.9 6.6 79 131-217 114-213 (427)
96 7aat_A Aspartate aminotransfer 47.6 1.1E+02 0.0039 24.9 9.5 79 131-217 121-209 (401)
97 3fsl_A Aromatic-amino-acid ami 47.4 33 0.0011 28.2 5.8 75 131-217 119-207 (397)
98 2po3_A 4-dehydrase; external a 47.4 23 0.00078 29.7 4.9 76 132-217 89-166 (424)
99 3cqj_A L-ribulose-5-phosphate 47.4 55 0.0019 25.8 7.0 25 148-177 66-90 (295)
100 1j32_A Aspartate aminotransfer 47.0 60 0.002 26.5 7.4 77 132-217 113-197 (388)
101 1gcy_A Glucan 1,4-alpha-maltot 46.9 31 0.0011 30.4 5.8 77 131-218 13-108 (527)
102 3cai_A Possible aminotransfera 46.8 25 0.00085 29.1 4.9 81 131-217 111-196 (406)
103 3zwf_A Zinc phosphodiesterase 46.8 15 0.0005 31.0 3.5 30 174-203 286-315 (368)
104 1o4s_A Aspartate aminotransfer 46.6 63 0.0022 26.5 7.5 73 132-217 124-208 (389)
105 4h1h_A LMO1638 protein; MCCF-l 46.2 45 0.0015 27.6 6.3 74 129-202 8-89 (327)
106 1qgn_A Protein (cystathionine 46.2 86 0.003 26.9 8.4 74 132-217 152-231 (445)
107 2jwk_A Protein TOLR; periplasm 45.9 50 0.0017 20.2 6.5 47 13-59 25-73 (74)
108 3rq1_A Aminotransferase class 45.5 64 0.0022 26.7 7.4 74 131-213 124-210 (418)
109 1e5e_A MGL, methionine gamma-l 44.9 50 0.0017 27.6 6.6 75 131-217 99-179 (404)
110 2c81_A Glutamine-2-deoxy-scyll 44.9 23 0.0008 29.6 4.5 77 131-217 80-158 (418)
111 3vax_A Putative uncharacterize 44.4 16 0.00055 30.1 3.4 79 131-217 106-190 (400)
112 2yrr_A Aminotransferase, class 44.4 41 0.0014 26.8 5.8 76 134-217 75-155 (353)
113 2ftp_A Hydroxymethylglutaryl-C 43.8 46 0.0016 27.0 6.0 68 148-219 159-231 (302)
114 3b46_A Aminotransferase BNA3; 43.7 54 0.0018 27.7 6.7 79 131-217 140-235 (447)
115 3can_A Pyruvate-formate lyase- 43.6 85 0.0029 22.8 7.1 14 204-217 80-93 (182)
116 1cs1_A CGS, protein (cystathio 43.2 1.3E+02 0.0046 24.4 9.8 74 132-217 90-168 (386)
117 1yaa_A Aspartate aminotransfer 43.1 1.3E+02 0.0045 24.7 9.0 74 132-217 123-210 (412)
118 4ds3_A Phosphoribosylglycinami 42.2 1.2E+02 0.0039 23.4 7.8 83 99-199 7-94 (209)
119 3l8a_A METC, putative aminotra 41.7 80 0.0027 26.3 7.4 79 132-217 142-228 (421)
120 3u7r_A NADPH-dependent FMN red 41.5 1.1E+02 0.0038 23.0 8.9 84 131-219 66-185 (190)
121 3fxa_A SIS domain protein; str 40.9 22 0.00075 26.7 3.4 34 130-165 90-123 (201)
122 3t18_A Aminotransferase class 40.8 81 0.0028 26.0 7.3 74 131-213 123-209 (413)
123 2rfv_A Methionine gamma-lyase; 40.4 83 0.0028 26.0 7.3 72 132-217 102-180 (398)
124 3fvs_A Kynurenine--oxoglutarat 39.6 92 0.0031 25.7 7.5 79 131-217 113-208 (422)
125 1vli_A Spore coat polysacchari 39.4 1.8E+02 0.0061 24.7 9.1 138 44-199 100-248 (385)
126 1ydn_A Hydroxymethylglutaryl-C 39.2 39 0.0013 27.3 4.8 68 148-219 155-227 (295)
127 4drs_A Pyruvate kinase; glycol 38.7 24 0.00081 31.5 3.6 33 152-190 60-92 (526)
128 3sr3_A Microcin immunity prote 38.0 66 0.0023 26.7 6.1 74 129-202 9-90 (336)
129 3gbx_A Serine hydroxymethyltra 37.8 86 0.0029 25.7 7.0 82 131-217 114-198 (420)
130 3tqx_A 2-amino-3-ketobutyrate 37.8 49 0.0017 27.0 5.4 72 131-217 125-206 (399)
131 4h51_A Aspartate aminotransfer 37.5 67 0.0023 27.4 6.3 80 131-217 135-224 (420)
132 2r2n_A Kynurenine/alpha-aminoa 37.5 1.6E+02 0.0053 24.5 8.6 75 132-217 131-225 (425)
133 3aow_A Putative uncharacterize 37.3 1.7E+02 0.0059 24.6 9.0 98 99-217 139-251 (448)
134 3i16_A Aluminum resistance pro 37.2 59 0.002 27.9 5.9 80 131-217 113-213 (427)
135 3f0h_A Aminotransferase; RER07 37.1 97 0.0033 24.9 7.1 78 131-217 93-175 (376)
136 3khd_A Pyruvate kinase; malari 37.1 24 0.00081 31.4 3.3 34 152-191 62-95 (520)
137 3jxp_A Coenzyme PQQ synthesis 36.8 53 0.0018 26.9 5.4 27 175-201 244-273 (321)
138 4f06_A Extracellular ligand-bi 36.7 1.6E+02 0.0056 23.8 8.5 67 150-219 156-222 (371)
139 3bb8_A CDP-4-keto-6-deoxy-D-gl 36.7 27 0.00094 29.5 3.7 77 130-217 107-186 (437)
140 1ydo_A HMG-COA lyase; TIM-barr 35.1 36 0.0012 27.9 4.0 67 148-218 157-228 (307)
141 2aeu_A Hypothetical protein MJ 35.1 1.4E+02 0.0048 24.4 7.8 70 132-217 97-173 (374)
142 3g0t_A Putative aminotransfera 34.8 90 0.0031 25.8 6.7 46 22-67 172-224 (437)
143 3nmy_A Xometc, cystathionine g 34.8 71 0.0024 26.8 6.0 73 131-217 103-183 (400)
144 1hvx_A Alpha-amylase; hydrolas 34.7 25 0.00087 30.8 3.2 81 133-218 4-97 (515)
145 3k7y_A Aspartate aminotransfer 34.3 1.3E+02 0.0043 25.3 7.5 98 103-217 100-208 (405)
146 3meb_A Aspartate aminotransfer 34.3 1.8E+02 0.0061 24.4 8.6 81 132-217 144-236 (448)
147 1fc4_A 2-amino-3-ketobutyrate 34.2 1E+02 0.0034 25.2 6.8 72 131-217 127-208 (401)
148 3piu_A 1-aminocyclopropane-1-c 34.2 1.5E+02 0.0052 24.5 8.1 74 132-217 134-225 (435)
149 3gg8_A Pyruvate kinase; malari 34.1 28 0.00097 30.9 3.3 34 152-191 52-85 (511)
150 3eb2_A Putative dihydrodipicol 33.7 63 0.0022 26.2 5.3 47 14-60 53-101 (300)
151 3cq5_A Histidinol-phosphate am 33.5 1.9E+02 0.0064 23.3 8.7 75 132-216 115-194 (369)
152 2l69_A Rossmann 2X3 fold prote 33.5 65 0.0022 21.7 4.3 32 35-66 3-34 (134)
153 2ctz_A O-acetyl-L-homoserine s 33.3 68 0.0023 26.9 5.6 75 131-217 95-175 (421)
154 3ele_A Amino transferase; RER0 33.2 1.4E+02 0.0047 24.3 7.5 73 132-214 122-203 (398)
155 1elu_A L-cysteine/L-cystine C- 32.6 91 0.0031 25.2 6.2 79 131-217 99-189 (390)
156 3klb_A Putative flavoprotein; 32.6 46 0.0016 24.1 3.9 81 129-217 75-162 (162)
157 2r91_A 2-keto-3-deoxy-(6-phosp 32.3 91 0.0031 25.0 6.0 48 14-62 47-94 (286)
158 3t05_A Pyruvate kinase, PK; te 32.3 34 0.0012 31.1 3.6 34 152-191 39-72 (606)
159 3ble_A Citramalate synthase fr 32.3 73 0.0025 26.3 5.5 66 149-218 170-240 (337)
160 4e1o_A HDC, histidine decarbox 32.2 60 0.0021 27.9 5.2 55 160-217 208-272 (481)
161 3acz_A Methionine gamma-lyase; 32.1 78 0.0027 26.2 5.8 73 131-217 96-175 (389)
162 1wpc_A Glucan 1,4-alpha-maltoh 32.0 24 0.00083 30.6 2.6 81 133-218 5-98 (485)
163 2o1b_A Aminotransferase, class 31.7 1.7E+02 0.0058 24.0 7.9 75 132-217 132-215 (404)
164 2bwn_A 5-aminolevulinate synth 31.3 1E+02 0.0035 25.2 6.3 71 132-217 131-209 (401)
165 3ly1_A Putative histidinol-pho 31.2 2E+02 0.0067 22.8 8.2 60 131-200 90-150 (354)
166 3jx9_A Putative phosphoheptose 31.1 21 0.00073 26.7 1.8 63 129-200 74-139 (170)
167 2lnd_A De novo designed protei 31.1 1.1E+02 0.0038 19.9 5.1 37 180-216 37-77 (112)
168 3ndo_A Deoxyribose-phosphate a 31.0 1.2E+02 0.004 23.9 6.2 70 146-217 144-213 (231)
169 2cw6_A Hydroxymethylglutaryl-C 29.5 85 0.0029 25.3 5.4 67 148-218 156-227 (298)
170 1e0t_A Pyruvate kinase, PK; ph 29.4 38 0.0013 29.7 3.3 34 152-191 18-51 (470)
171 3ri6_A O-acetylhomoserine sulf 29.4 1.9E+02 0.0065 24.5 7.8 73 131-217 119-198 (430)
172 3hqn_D Pyruvate kinase, PK; TI 29.3 38 0.0013 30.0 3.3 34 152-191 36-69 (499)
173 1v72_A Aldolase; PLP-dependent 29.1 68 0.0023 25.6 4.8 77 132-217 82-174 (356)
174 3elf_A Fructose-bisphosphate a 29.1 92 0.0032 26.1 5.5 33 32-64 19-51 (349)
175 2dzd_A Pyruvate carboxylase; b 28.9 1.1E+02 0.0037 26.1 6.2 39 179-217 67-105 (461)
176 1zl0_A Hypothetical protein PA 28.9 99 0.0034 25.4 5.7 74 129-202 13-91 (311)
177 2dou_A Probable N-succinyldiam 28.9 1.2E+02 0.0042 24.5 6.4 73 132-217 110-192 (376)
178 3mad_A Sphingosine-1-phosphate 28.8 68 0.0023 27.7 5.0 74 133-217 192-270 (514)
179 3tla_A MCCF; serine protease, 28.7 95 0.0033 26.2 5.7 74 129-202 39-120 (371)
180 3hly_A Flavodoxin-like domain; 28.7 84 0.0029 22.6 4.8 52 132-188 82-133 (161)
181 1nvm_A HOA, 4-hydroxy-2-oxoval 28.6 2.4E+02 0.0084 23.1 8.9 80 135-218 135-221 (345)
182 1iug_A Putative aspartate amin 28.3 61 0.0021 25.8 4.3 74 132-217 74-154 (352)
183 2x5d_A Probable aminotransfera 28.3 2.4E+02 0.0083 23.0 9.3 74 132-217 122-206 (412)
184 2fq6_A Cystathionine beta-lyas 28.3 32 0.0011 29.2 2.7 73 131-217 119-200 (415)
185 2cc0_A Acetyl-xylan esterase; 28.3 1.4E+02 0.0046 22.2 6.1 66 152-218 109-178 (195)
186 3g1w_A Sugar ABC transporter; 28.3 2.1E+02 0.007 22.1 10.3 12 152-163 52-63 (305)
187 3kr9_A SAM-dependent methyltra 28.2 84 0.0029 24.4 4.9 53 103-166 87-139 (225)
188 2nuw_A 2-keto-3-deoxygluconate 28.2 82 0.0028 25.3 5.0 48 14-62 48-95 (288)
189 1vp4_A Aminotransferase, putat 28.2 2.2E+02 0.0076 23.4 8.0 94 103-217 112-222 (425)
190 2pfu_A Biopolymer transport EX 28.1 50 0.0017 21.6 3.1 50 14-63 38-90 (99)
191 3jzl_A Putative cystathionine 28.1 66 0.0022 27.3 4.6 79 131-217 99-196 (409)
192 3dzz_A Putative pyridoxal 5'-p 27.5 92 0.0031 25.2 5.4 23 45-67 180-202 (391)
193 3kax_A Aminotransferase, class 27.4 1.4E+02 0.0049 23.9 6.6 23 44-66 175-197 (383)
194 3o21_A Glutamate receptor 3; p 27.2 2.6E+02 0.0088 22.9 8.5 69 143-218 140-211 (389)
195 3ivs_A Homocitrate synthase, m 27.2 2E+02 0.0068 24.7 7.5 82 133-218 164-250 (423)
196 1yaa_A Aspartate aminotransfer 27.0 1.4E+02 0.0048 24.4 6.5 35 33-67 177-218 (412)
197 1s12_A Hypothetical protein TM 26.9 24 0.00082 23.6 1.3 12 171-183 10-21 (94)
198 1c7n_A Cystalysin; transferase 26.7 1.2E+02 0.0043 24.6 6.1 46 22-67 154-206 (399)
199 3lec_A NADB-rossmann superfami 26.7 91 0.0031 24.3 4.9 53 103-166 93-145 (230)
200 3llc_A Putative hydrolase; str 26.5 1.9E+02 0.0065 21.2 7.5 19 172-190 108-126 (270)
201 3om0_A Glutamate receptor, ion 26.4 2.6E+02 0.0089 22.7 8.3 62 151-218 156-217 (393)
202 2z61_A Probable aspartate amin 26.2 1.2E+02 0.0041 24.4 5.8 68 132-217 112-184 (370)
203 3k2g_A Resiniferatoxin-binding 26.1 1.4E+02 0.0049 24.9 6.3 52 159-217 201-257 (364)
204 1gc0_A Methionine gamma-lyase; 26.1 95 0.0032 25.7 5.2 74 132-217 103-181 (398)
205 1zkp_A Hypothetical protein BA 25.9 32 0.0011 26.9 2.1 29 33-61 229-257 (268)
206 2zyj_A Alpha-aminodipate amino 25.9 2.6E+02 0.009 22.6 8.4 75 132-217 114-197 (397)
207 3fkr_A L-2-keto-3-deoxyarabona 25.8 1.1E+02 0.0036 25.0 5.3 46 14-59 57-104 (309)
208 3cpr_A Dihydrodipicolinate syn 25.8 1.8E+02 0.0062 23.5 6.8 47 14-60 65-113 (304)
209 2x5f_A Aspartate_tyrosine_phen 25.7 1.3E+02 0.0046 24.8 6.2 74 132-214 136-220 (430)
210 3qze_A DHDPS, dihydrodipicolin 25.3 1.1E+02 0.0038 24.9 5.4 49 14-62 72-122 (314)
211 3na8_A Putative dihydrodipicol 25.2 1E+02 0.0034 25.2 5.1 50 14-63 73-124 (315)
212 3bh4_A Alpha-amylase; calcium, 25.2 36 0.0012 29.5 2.5 63 151-218 24-94 (483)
213 2e28_A Pyruvate kinase, PK; al 25.1 49 0.0017 29.9 3.3 34 152-191 19-52 (587)
214 4eu1_A Mitochondrial aspartate 25.0 1.5E+02 0.0052 24.2 6.4 24 43-66 201-224 (409)
215 3ezs_A Aminotransferase ASPB; 24.8 2.7E+02 0.0091 22.2 8.0 73 133-217 108-188 (376)
216 3gr4_A Pyruvate kinase isozyme 24.7 57 0.0019 29.2 3.6 33 152-190 78-110 (550)
217 3e2y_A Kynurenine-oxoglutarate 24.6 1.7E+02 0.0059 23.8 6.6 79 131-217 107-201 (410)
218 3cog_A Cystathionine gamma-lya 24.6 79 0.0027 26.4 4.5 72 131-216 103-181 (403)
219 2qv5_A AGR_C_5032P, uncharacte 24.4 2.5E+02 0.0086 22.3 7.2 66 14-80 106-178 (261)
220 1a3w_A Pyruvate kinase; allost 24.4 39 0.0013 29.9 2.5 34 152-191 35-68 (500)
221 1j6o_A TATD-related deoxyribon 24.4 2.1E+02 0.0072 22.1 6.8 48 149-205 121-170 (268)
222 2kln_A Probable sulphate-trans 24.4 1.7E+02 0.0058 19.8 5.6 65 15-80 28-101 (130)
223 3b4u_A Dihydrodipicolinate syn 24.2 1.8E+02 0.006 23.4 6.4 47 14-60 52-100 (294)
224 1whz_A Hypothetical protein; a 24.0 68 0.0023 19.7 3.0 56 150-218 7-63 (70)
225 4ici_A Putative flavoprotein; 24.0 2.1E+02 0.0071 20.7 6.5 55 130-191 115-169 (171)
226 1qz9_A Kynureninase; kynurenin 23.9 1.9E+02 0.0065 23.5 6.8 37 180-217 155-196 (416)
227 2zyj_A Alpha-aminodipate amino 23.7 1.5E+02 0.0051 24.2 6.0 24 43-66 181-204 (397)
228 2l8b_A Protein TRAI, DNA helic 23.7 1.2E+02 0.0042 23.0 4.8 50 19-68 38-90 (189)
229 3l8a_A METC, putative aminotra 23.4 1.3E+02 0.0043 25.0 5.5 43 24-66 186-235 (421)
230 3ftb_A Histidinol-phosphate am 23.3 2.8E+02 0.0095 21.9 8.0 92 99-217 77-178 (361)
231 1ud2_A Amylase, alpha-amylase; 23.3 48 0.0017 28.6 2.9 79 135-218 5-96 (480)
232 3qhx_A Cystathionine gamma-syn 23.2 3.1E+02 0.011 22.4 8.4 73 131-217 103-182 (392)
233 1w3i_A EDA, 2-keto-3-deoxy glu 23.2 1.1E+02 0.0037 24.6 4.9 46 14-60 48-93 (293)
234 2a7v_A Serine hydroxymethyltra 23.2 74 0.0025 27.8 4.1 43 175-217 187-232 (490)
235 2wqp_A Polysialic acid capsule 23.1 3.3E+02 0.011 22.7 9.4 137 43-199 89-236 (349)
236 1xky_A Dihydrodipicolinate syn 23.1 1.5E+02 0.0053 23.8 5.8 48 14-61 61-110 (301)
237 1bs0_A Protein (8-amino-7-oxon 22.9 2.9E+02 0.01 22.1 8.3 72 131-217 121-199 (384)
238 1dos_A Aldolase class II; lyas 22.8 1.3E+02 0.0044 25.3 5.3 46 18-65 15-60 (358)
239 3fni_A Putative diflavin flavo 22.8 1.7E+02 0.0057 20.9 5.5 53 132-189 87-139 (159)
240 4dq6_A Putative pyridoxal phos 22.5 94 0.0032 25.2 4.5 23 45-67 184-206 (391)
241 2diu_A KIAA0430 protein; struc 22.3 78 0.0027 21.3 3.1 29 8-36 14-42 (96)
242 3eeg_A 2-isopropylmalate synth 22.2 2.9E+02 0.0098 22.6 7.4 82 133-218 135-225 (325)
243 2w70_A Biotin carboxylase; lig 22.1 67 0.0023 27.3 3.6 20 181-200 64-83 (449)
244 5nul_A Flavodoxin; electron tr 22.1 1.9E+02 0.0065 19.6 6.6 52 131-187 78-129 (138)
245 2gzx_A Putative TATD related D 22.1 2.5E+02 0.0085 21.3 6.8 44 149-201 110-155 (265)
246 3ouz_A Biotin carboxylase; str 22.0 66 0.0023 27.3 3.5 14 152-165 69-82 (446)
247 3kcq_A Phosphoribosylglycinami 21.8 2.7E+02 0.0092 21.4 6.7 81 100-199 9-90 (215)
248 2gb3_A Aspartate aminotransfer 21.7 1.5E+02 0.0052 24.3 5.7 73 132-217 125-208 (409)
249 2z67_A O-phosphoseryl-tRNA(SEC 21.7 2.3E+02 0.0078 23.9 6.9 79 132-217 175-262 (456)
250 1rv3_A Serine hydroxymethyltra 21.7 97 0.0033 26.6 4.5 82 131-217 132-222 (483)
251 3rmj_A 2-isopropylmalate synth 21.4 2.2E+02 0.0074 23.9 6.5 82 133-218 141-231 (370)
252 3ksm_A ABC-type sugar transpor 21.4 2.6E+02 0.009 21.0 7.7 10 155-164 24-33 (276)
253 3da8_A Probable 5'-phosphoribo 21.4 2.7E+02 0.0091 21.4 6.6 79 101-199 14-97 (215)
254 2cb1_A O-acetyl homoserine sul 21.4 1.7E+02 0.0058 24.2 6.0 74 131-217 93-171 (412)
255 2yx0_A Radical SAM enzyme; pre 21.4 2.2E+02 0.0074 23.0 6.5 64 134-204 143-208 (342)
256 3irs_A Uncharacterized protein 21.2 2.2E+02 0.0074 22.5 6.3 30 180-210 171-201 (291)
257 3flu_A DHDPS, dihydrodipicolin 21.1 1.8E+02 0.0062 23.4 5.8 48 14-61 56-105 (297)
258 3ihj_A Alanine aminotransferas 21.1 1.1E+02 0.0037 26.5 4.7 23 44-66 254-276 (498)
259 3umo_A 6-phosphofructokinase i 21.0 2.5E+02 0.0084 22.1 6.7 55 12-67 110-169 (309)
260 2vpq_A Acetyl-COA carboxylase; 21.0 70 0.0024 27.2 3.4 14 152-165 64-77 (451)
261 3qph_A TRMB, A global transcri 21.0 2.5E+02 0.0087 23.1 6.8 48 16-63 116-163 (342)
262 3meb_A Aspartate aminotransfer 20.9 1.9E+02 0.0064 24.3 6.2 24 43-66 220-243 (448)
263 2wkj_A N-acetylneuraminate lya 20.9 1.7E+02 0.0057 23.7 5.6 47 14-60 60-108 (303)
264 2e7y_A TRNAse Z; tRNA maturati 20.9 2.2E+02 0.0075 21.8 6.3 54 1-57 205-263 (280)
265 3m5v_A DHDPS, dihydrodipicolin 20.9 1.8E+02 0.0061 23.4 5.8 49 14-62 56-107 (301)
266 3h6g_A Glutamate receptor, ion 20.7 1.9E+02 0.0064 23.6 6.0 64 151-219 155-218 (395)
267 2eja_A URO-D, UPD, uroporphyri 20.6 1.4E+02 0.0048 24.3 5.1 45 15-59 286-337 (338)
268 4f0j_A Probable hydrolytic enz 20.6 2.7E+02 0.0093 20.8 6.8 17 149-165 61-77 (315)
269 2ehh_A DHDPS, dihydrodipicolin 20.3 1.9E+02 0.0065 23.1 5.8 49 14-62 49-99 (294)
270 2q7w_A Aspartate aminotransfer 20.2 1.9E+02 0.0066 23.3 6.0 44 23-66 161-213 (396)
271 3jtx_A Aminotransferase; NP_28 20.1 3.4E+02 0.012 21.7 8.4 71 134-217 121-202 (396)
272 3fdb_A Beta C-S lyase, putativ 20.1 1.9E+02 0.0063 23.2 5.8 24 44-67 169-192 (377)
273 3ks9_A Mglur1, metabotropic gl 20.1 4.1E+02 0.014 22.7 8.4 66 149-218 213-282 (496)
274 1byr_A Protein (endonuclease); 20.1 2.2E+02 0.0076 19.6 6.3 46 16-62 11-57 (155)
No 1
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=1.6e-47 Score=348.69 Aligned_cols=219 Identities=34% Similarity=0.535 Sum_probs=207.7
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHHCCC
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGK 80 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~~g~ 80 (221)
||+||||+.+++++.+|.++.+.+.+++.+++|+|+|++||+|++|+|+++++|.++||+++++|++|..+++.+.+.|+
T Consensus 192 Li~esT~~~~~~~~~se~~v~~~i~~~~~~~~grvii~~fasnv~R~q~il~~a~~~gr~v~v~grs~~~~~~~~~~~g~ 271 (555)
T 3zq4_A 192 LLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVQNGRKVAVFGRSMESAIEIGQTLGY 271 (555)
T ss_dssp EEEECTTTTCCSCCCCHHHHHHHHHHHHHHCCSCEEEECCTTCHHHHHHHHHHHHTTTCEEEEESHHHHHHHHHHHGGGS
T ss_pred EEecCcccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEChhHHHHHHHHHHHHHHHCCEEEEeCHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999998878999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccChhhhhhcCCCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHc
Q 045468 81 APIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEI 160 (221)
Q Consensus 81 ~~~~~~~~v~~~~~~~~~~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~ 160 (221)
+++++..+++.++++.+++++++|++||+|||++++|.+++.++|..++++++|++|||+|++||+|....++.|++.+.
T Consensus 272 l~~p~~~~v~~~~~~~~~~~~~vii~tgsqGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~ 351 (555)
T 3zq4_A 272 INCPKNTFIEHNEINRMPANKVTILCTGSQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRA 351 (555)
T ss_dssp CCCCGGGEECGGGTTTSCGGGEEEEECCTTCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHT
T ss_pred ccCCcccEeCHHHHhhCCCCCEEEEeCCCCchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHC
Confidence 98876678889999999888999999999999999999999999999999999999999999999999888999999999
Q ss_pred CCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCCCC
Q 045468 161 GSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGIRH 219 (221)
Q Consensus 161 g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~~~ 219 (221)
|++|+......+|+||||+++||+.|++.++|+++||||||++++.+|+++|+++|+++
T Consensus 352 g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~~~~a~~~G~~~ 410 (555)
T 3zq4_A 352 GAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPE 410 (555)
T ss_dssp TCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHHHHHHHHHHHTTCCG
T ss_pred CCEEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCc
Confidence 99998655567999999999999999999999999999999999999999999999963
No 2
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=3.4e-40 Score=301.10 Aligned_cols=218 Identities=33% Similarity=0.519 Sum_probs=201.8
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHHCCC
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGK 80 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~~g~ 80 (221)
||+|||++.+++...+|.++.+.+.+++.+.+|+|++++|++|++|+|+++++|+++||++++++++|...++.+.+.|+
T Consensus 208 Li~EsT~~~~~g~~~~e~~v~~~l~~~~~~~~grvii~~fas~~~r~q~il~~a~~~~r~V~v~g~s~~~~~~~~~~~g~ 287 (562)
T 3bk2_A 208 LIADATNAERPGYTPSEMEIAKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKYGRKVAMEGRSMLKFSRIALELGY 287 (562)
T ss_dssp EEEECTTTTCCSCCCCHHHHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHTTCEEEEECHHHHHHHHHHHHTTS
T ss_pred EEecccCCCCCCCCChHHHHHHHHHHHHHhCCCEEEEEEccccchHHHHHHHHHHHhCCEEEEEChHHHHHHHHHHhcCc
Confidence 68999999988888899999999999998778999999999999999999999999999999999999999998888898
Q ss_pred CCCCCCCccChhhhhhcCCCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHc
Q 045468 81 APIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEI 160 (221)
Q Consensus 81 ~~~~~~~~v~~~~~~~~~~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~ 160 (221)
++. ++.+++.++++.++++++++++||+||+++..|.+++.+.|..++++++|++|||+|++||++....++.|++.+.
T Consensus 288 l~~-~~~~i~~~~~~~~~~~~~vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~ 366 (562)
T 3bk2_A 288 LKV-KDRLYTLEEVKDLPDHQVLILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYAL 366 (562)
T ss_dssp CCC-SSCCBCTGGGTTSCGGGEEEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHT
T ss_pred ccC-CCCccCHHHHhcCCCCCEEEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeC
Confidence 875 4567888888888888999999999999999999999998988899999999999999999999889999999999
Q ss_pred CCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCCCC
Q 045468 161 GSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGIRH 219 (221)
Q Consensus 161 g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~~~ 219 (221)
|++++......+|+||||+++||+.|++.++|+++||||||++++.+++++|++.|+++
T Consensus 367 g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~~~~~~~~~~~g~~~ 425 (562)
T 3bk2_A 367 GAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQMNFKWLAESMSRPP 425 (562)
T ss_dssp TCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCHHHHHHHHHHHHTSSSCC
T ss_pred CCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHHHHHHHHHHHcCCCc
Confidence 99998544357899999999999999999999999999999999999999999999963
No 3
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.95 E-value=8.9e-28 Score=212.31 Aligned_cols=181 Identities=17% Similarity=0.209 Sum_probs=144.1
Q ss_pred CccccCCCCCCC--------CCCCHHHHHHHHHHHHHhcCCc-EEEEeccccHHHHHHHHHHHHHcCCeEEEEcccHHHH
Q 045468 1 MMSDSTNVLSPG--------RTTSESVVKDALMRHVSAAKGR-VITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTY 71 (221)
Q Consensus 1 Li~EsT~~~~~~--------~~~sE~~v~~~i~~~~~~~~g~-viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~ 71 (221)
||+|||+..+++ ...+++++.+.+.+++++..++ +++.+|++|++|+|++ |++.||+++++|+.+..+
T Consensus 213 Li~Est~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~rlil~h~~~~~~~r~~~~---a~~~gr~v~~~g~~~~~~ 289 (429)
T 2az4_A 213 LMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENPNRQITFNGYPANVERFAKI---IEKSPRTVVLEANMAALL 289 (429)
T ss_dssp EEEECCGGGSCCCCCCTTBCCCCSHHHHHHHHHHHHHTCSSSCEEEEECTTCHHHHHHH---HHHCSSEEEEEHHHHHHH
T ss_pred EEECCCCcCcccccccccCCCCCCHHHHHHHHHHHHHhCCCcEEEEEeccchHHHHHHH---HHHhCCEEEEEChhHHHH
Confidence 689999987431 1578999999999998876675 5557799999999998 779999999999988677
Q ss_pred HHHH-HHCCCCCCCC--------CCccChhhhhhcCCCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecC
Q 045468 72 LDAA-WKDGKAPIDP--------STLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKV 142 (221)
Q Consensus 72 ~~~~-~~~g~~~~~~--------~~~v~~~~~~~~~~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~ 142 (221)
.+.. .+.|++..+. ..+++.++++.++++. +++. .+ .++ ++.++|+||||+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ii~~---~~------------~~~--~l~~~~~vi~s~~~ 351 (429)
T 2az4_A 290 LEVFGIEVRYYYAESGKIPELNPALEIPYDTLLKDKTDY-LWQV---VN------------QFD--NLQEGSLYIHSDAQ 351 (429)
T ss_dssp HHHHCCCCEEECSSSSCCTTSCGGGBCCHHHHHHCSSSE-EEEC---CS------------CGG--GSCTTCEEEEESCS
T ss_pred HhhccccCeeEecccccccccCccceecHHHHhhCCCcE-EEEe---cC------------cHH--hhCCCCEEEEeCCC
Confidence 6663 4566554322 2366778888776653 3332 11 122 34578999999999
Q ss_pred CCCcH-HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHH
Q 045468 143 IPGNE-SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKE 207 (221)
Q Consensus 143 ~pg~e-~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~ 207 (221)
+||++ ....++.||+.+.|++++ .+|+||||+++||+.|++.++||++||||||++++.+
T Consensus 352 ~~g~~~~~~~~~~~~~~~~~~~v~-----~i~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~ 412 (429)
T 2az4_A 352 PLGDFDPQYRVFLDLLAKKDITFV-----RLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLE 412 (429)
T ss_dssp SCSTTSHHHHHHHHHHHHTTCEEE-----ECCCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGCC
T ss_pred CCcccchHHHHHHHHHHhCCCEEE-----EEeecCCCCHHHHHHHHHhhCCCEEEECCCCchhhhh
Confidence 99987 477899999999999998 7899999999999999999999999999999998765
No 4
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.92 E-value=5.3e-25 Score=203.88 Aligned_cols=205 Identities=17% Similarity=0.190 Sum_probs=143.6
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHHHHHh---cCCcEEEEeccccHHHHHHHHHHHHHcCC------eEEEEcccHHHH
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMRHVSA---AKGRVITTQFASNIHRLGSVKAAADLTGR------KLVFVGMSLRTY 71 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~~~~~---~~g~viv~~~a~ni~Rl~~i~~~a~~~gR------~~vi~~~~~~~~ 71 (221)
||+||||.++.+...++.+..+.+.+.+.+ .+|+|+|++|+ ++|.|+++.++.+++| +++++|+++ ..
T Consensus 389 LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp~fa--vgR~qell~~l~~~~~~~~l~~~I~~dg~a~-~~ 465 (651)
T 3af5_A 389 LVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIW-EA 465 (651)
T ss_dssp EEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCT--TTHHHHHHHHHHHHHTTTCCCSCEEEESSHH-HH
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeccC--ccHHHHHHHHHHHhhhhcCCCCcEEEechHH-HH
Confidence 689999998875555666655555555543 58999999999 9999999999999987 899999765 44
Q ss_pred HHHHHH-CCCCCCC---------CCCc-------cC-hhhhhhc-C-CCCEEEEecCCC--ccH-HHHHHHHhcCCCCCc
Q 045468 72 LDAAWK-DGKAPID---------PSTL-------VK-VEDIDAY-A-PKDLLIVTTGSQ--AEP-RAALNLASYGGSHSL 128 (221)
Q Consensus 72 ~~~~~~-~g~~~~~---------~~~~-------v~-~~~~~~~-~-~~~~vi~~~g~~--~e~-~~~l~~~~~~~~~~~ 128 (221)
+....+ .++++.+ .+.| ++ .++...+ + ++..+|++++++ |++ .++|.+++.+
T Consensus 466 ~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~~vIia~~gm~~gg~~~~~l~~~~~~----- 540 (651)
T 3af5_A 466 TAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPD----- 540 (651)
T ss_dssp HHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTEEECCSHHHHHHHHHSCSCEEEEESCTTSSSSHHHHHHHHHTTC-----
T ss_pred HHHHHHhHHhcCHHHHHHHHhccCCCccCCceEEcCCHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHhCC-----
Confidence 444332 2222210 1111 22 1222222 2 445677777644 554 8899998875
Q ss_pred ccCCCCEEEEEecCCCCcHHHHHHHHHHHH------HcCC--eE-EecCCceee-eecCCCHHHHHHHHHHcC--CCEEE
Q 045468 129 KLTNEDVILYSAKVIPGNESRVMKMLNRIS------EIGS--TI-VMGRNEGLH-TSGHGYRGELEEVLKLVK--PQHFL 196 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~------~~g~--~v-~~~~~~~~h-~SGHA~~~dL~~~i~~i~--Pk~ii 196 (221)
++|++|||+|++||+.... +.+... +.|. .+ +......+| +||||+++||+.|++.++ |+++|
T Consensus 541 ---~~~~vi~sg~~~~gt~gr~--l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi 615 (651)
T 3af5_A 541 ---PKNSIIFVSYQAEGTLGRQ--VQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERII 615 (651)
T ss_dssp ---TTCEEEECSCCCTTCHHHH--HHHTCSEEEEECGGGCEEEEECCSEEEECGGGCSSCCHHHHHHHHHHCBSCCSEEE
T ss_pred ---CCCEEEEeCCCCCCcHHHH--HHhccceeeehhcCCCceEEEeEEEEEEcCcccCcCCHHHHHHHHHHhhcCCCEEE
Confidence 8899999999999986532 322211 1243 22 111223689 999999999999999999 99999
Q ss_pred EcCCChHHHHHHHHHHH-hcCCC
Q 045468 197 PIHGELLFLKEHELLGR-STGIR 218 (221)
Q Consensus 197 PVHge~~~~~~~~~~~~-~~g~~ 218 (221)
|||||++++.+++++++ +.|++
T Consensus 616 ~vHGe~~~~~~la~~~~~~~g~~ 638 (651)
T 3af5_A 616 TVHGEPQKCLDLATSIHRKFGIS 638 (651)
T ss_dssp EESSCHHHHHHHHHHHHHHHCCE
T ss_pred EEcCCHHHHHHHHHHHHHhcCCe
Confidence 99999999999999985 56863
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.92 E-value=3.1e-25 Score=205.06 Aligned_cols=205 Identities=15% Similarity=0.140 Sum_probs=142.1
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHHHHHh---cCCcEEEEeccccHHHHHHHHHHHHHcCC-------eEEEEcccHHH
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMRHVSA---AKGRVITTQFASNIHRLGSVKAAADLTGR-------KLVFVGMSLRT 70 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~~~~~---~~g~viv~~~a~ni~Rl~~i~~~a~~~gR-------~~vi~~~~~~~ 70 (221)
||+||||.++.+...++.+..+.+.+.+.+ .+|+++|++|+ ++|.|+++.++.+++| +++++|+++ .
T Consensus 374 LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa--~GR~qell~~l~~~~~~~~~~~~~V~~dg~~~-~ 450 (636)
T 2ycb_A 374 LVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA--VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIW-E 450 (636)
T ss_dssp EEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCT--TTHHHHHHHHHHHHHHTTSSCCCCEEEEHHHH-H
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECC--CcHHHHHHHHHHHHHHhCCCCCCeEEEehHHH-H
Confidence 689999998764445665555555555443 47999999999 9999999999988876 899999765 3
Q ss_pred HHHHHHH-CCCCCCC---------CCCc-----c---ChhhhhhcC-CCCEEEEecCCC---ccHHHHHHHHhcCCCCCc
Q 045468 71 YLDAAWK-DGKAPID---------PSTL-----V---KVEDIDAYA-PKDLLIVTTGSQ---AEPRAALNLASYGGSHSL 128 (221)
Q Consensus 71 ~~~~~~~-~g~~~~~---------~~~~-----v---~~~~~~~~~-~~~~vi~~~g~~---~e~~~~l~~~~~~~~~~~ 128 (221)
.+....+ .++++.+ .+.| . +..+...++ ++..+|++++++ |....+|.+++.+
T Consensus 451 ~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~vIiat~gm~~gg~~~~~l~~~~~~----- 525 (636)
T 2ycb_A 451 ANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSLEYFKWLCED----- 525 (636)
T ss_dssp HHHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEEEECCHHHHHHHHHSSSCEEEESCSSSSSHHHHHHHHHHTTC-----
T ss_pred HHHHHHHhHHhhCHHHHHHHHhccCCcccCCceEEeCCHHHHHHhccCCCEEEEecCCccCCChHHHHHHHHhCC-----
Confidence 4443333 2333211 1111 1 122333332 445677777654 4458889998875
Q ss_pred ccCCCCEEEEEecCCCCcHHHHHHHHHHHH------HcCC--eE-EecCCceee-eecCCCHHHHHHHHHHcC--CCEEE
Q 045468 129 KLTNEDVILYSAKVIPGNESRVMKMLNRIS------EIGS--TI-VMGRNEGLH-TSGHGYRGELEEVLKLVK--PQHFL 196 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~------~~g~--~v-~~~~~~~~h-~SGHA~~~dL~~~i~~i~--Pk~ii 196 (221)
++|++||++|++||+.... +.+... +.|. .+ +......+| +||||+++||+.|++.++ |+++|
T Consensus 526 ---~~~~vi~sg~~~~Gt~gr~--l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~SgHad~~eL~~~i~~~~~~Pk~vi 600 (636)
T 2ycb_A 526 ---PDNSLVFVGYQAEGSLGRR--IQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKIL 600 (636)
T ss_dssp ---TTSEEEECSCCCSSSHHHH--HHTTCCEEEEECSSSCEEEEECCSEEEECCSCCSSCCHHHHHHHHHSCSSCCSEEE
T ss_pred ---CCCEEEEecCCCCCCHHHH--hhcCCceeeeeccCCceeEEEeEEEEEEECCcceeCCHHHHHHHHHHhccCCCEEE
Confidence 8999999999999986542 222111 1243 22 111123689 999999999999999999 99999
Q ss_pred EcCCChHHHHHHHHHHH-hcCCC
Q 045468 197 PIHGELLFLKEHELLGR-STGIR 218 (221)
Q Consensus 197 PVHge~~~~~~~~~~~~-~~g~~ 218 (221)
|||||++++.++++.++ +.|++
T Consensus 601 ~vHGe~~~~~~~a~~~~~~~g~~ 623 (636)
T 2ycb_A 601 LCHGDNYKTLDLASSIYRTYRIE 623 (636)
T ss_dssp EESSCHHHHHHHHHHHHHHHCCE
T ss_pred EECCCHHHHHHHHHHHHHHcCCc
Confidence 99999999999999995 56863
No 6
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.92 E-value=3.4e-26 Score=196.38 Aligned_cols=161 Identities=13% Similarity=0.084 Sum_probs=129.4
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccccHHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHHCC
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMRHVSAAK-GRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDG 79 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~~~~~~~-g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~~g 79 (221)
||+||||+++++...+|.++.+.+.+++.+++ |+|+|++| |++|+|+++++|+++||+++++|++|..+ ...|
T Consensus 143 Li~DsT~~~~~~~~pse~~v~~~l~~~i~~~~~g~vii~~f--~vgR~q~i~~~a~~~grkV~v~gr~~~~~----~~lg 216 (336)
T 3zdk_A 143 LYLDNTNCNPALVLPSRQEAAHQIVQLIRKHPQHNIKIGLY--SLGKESLLEQLALEFQTWVVLSPRRLELV----QLLG 216 (336)
T ss_dssp EEECCTBCCTTCCCCCHHHHHHHHHHHHHTCTTSEEEEEEC--SSSCHHHHHHHHHHHTCCEECCHHHHHHH----HHTT
T ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEeec--chHHHHHHHHHHHHcCCEEEEEhHHHHHH----HhcC
Confidence 68999999998888999999999999998875 59999999 69999999999999999999999998654 4567
Q ss_pred CCCCCCCCccChhhhhhcCCCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHH
Q 045468 80 KAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISE 159 (221)
Q Consensus 80 ~~~~~~~~~v~~~~~~~~~~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~ 159 (221)
+. +.+++.++...++....++++ .+.|.+++ +.+..+.+.+ |+|.+||++.
T Consensus 217 ~~----~~~~~~~~~~~i~~~~~~~i~-------~~al~r~~-~~~~~i~i~~------S~~~ipg~~~----------- 267 (336)
T 3zdk_A 217 LA----DVFTVEEKAGRIHAVDHMEIC-------HSNMLRWN-QTHPTIAILP------TSRKIHSSHP----------- 267 (336)
T ss_dssp CC----SCEESCGGGCSEEEEEGGGCS-------HHHHHHHH-HHSCEEEEEE------CSSCCCCSST-----------
T ss_pred Cc----cccCCHhHcCCCCcchhheeH-------HHHHHhhh-CcCCeEEEEe------ccccccCCcc-----------
Confidence 53 245555555544333322222 67788888 6666666655 8888999753
Q ss_pred cCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-CChHH
Q 045468 160 IGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-GELLF 204 (221)
Q Consensus 160 ~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-ge~~~ 204 (221)
| +. .+|.||||+.+||+.|++.++|+++|||| ||+.+
T Consensus 268 -~--~~-----~vh~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge~~~ 305 (336)
T 3zdk_A 268 -D--IH-----VIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPCG 305 (336)
T ss_dssp -T--EE-----EECCCSSCBHHHHHHHHHHHCCSCEEESCTTSCCC
T ss_pred -C--ce-----eeEecCCCCHHHHHHHHHHhCCCEEEEEECCcCch
Confidence 2 23 69999999999999999999999999999 99863
No 7
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.92 E-value=2.3e-25 Score=205.88 Aligned_cols=207 Identities=16% Similarity=0.132 Sum_probs=137.2
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHHHHHh---cCCcEEEEeccccHHHHHHHHHHHHHcCC-------eEEEEcccHHH
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMRHVSA---AKGRVITTQFASNIHRLGSVKAAADLTGR-------KLVFVGMSLRT 70 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~~~~~---~~g~viv~~~a~ni~Rl~~i~~~a~~~gR-------~~vi~~~~~~~ 70 (221)
||+||||.++.+...++.+..+.+.+.+.. .+|+|+|++|+ ++|.|+++.++.+++| +++++|+++ .
T Consensus 377 Li~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa--vGR~qell~~l~~~~~~~~~~~~~V~~dg~a~-~ 453 (640)
T 2xr1_A 377 VISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGIAVIPAFA--VGRSQEVMIVLEESIRKGLIPEVPVYLDGMIW-E 453 (640)
T ss_dssp EEEECTTCSTTCCCCCHHHHHHHHHHHC--------CEEEECCT--TTHHHHHHHHHHHHHHHTSSCCCCEEEESSHH-H
T ss_pred EEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecc--cchHHHHHHHHHHHHHhCCCCCCcEEEEhHHH-H
Confidence 589999998765455666666666555543 47899999999 9999999999999886 899999776 4
Q ss_pred HHHHHHH-CCCCCCC---------CCCc-----c--C-hhhhhhc-C-CCCEEEEecCCC---ccHHHHHHHHhcCCCCC
Q 045468 71 YLDAAWK-DGKAPID---------PSTL-----V--K-VEDIDAY-A-PKDLLIVTTGSQ---AEPRAALNLASYGGSHS 127 (221)
Q Consensus 71 ~~~~~~~-~g~~~~~---------~~~~-----v--~-~~~~~~~-~-~~~~vi~~~g~~---~e~~~~l~~~~~~~~~~ 127 (221)
.+....+ .++++.+ .+.| . + .++...+ + ++..+|++++++ |+..++|.+++.+
T Consensus 454 ~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~vIiat~gm~~gg~~~~~l~~~~~~---- 529 (640)
T 2xr1_A 454 ATAIHATHPEYLNNDLRKLIFQKGQNPFLSECFKPVDSHEARQKIIQNPQPCVILATSGMMNGGPVMEYFKAFAED---- 529 (640)
T ss_dssp HHHHHHHCGGGSCHHHHHHC------CTTCTTEEEEC-CHHHHHC----CCCEEEESCTTSSSSHHHHHHHHHSSC----
T ss_pred HHHHHHHhHhhhcHHHHHHHHhcccCcccCCceEEeCCHHHHHHHhcCCCCeEEEeCCCccCCChHHHHHHHhhCC----
Confidence 4433333 2333211 1111 1 2 1232332 2 345567777654 4458999999875
Q ss_pred cccCCCCEEEEEecCCCCcHHHHH----HHHHHHHHcCC--eE-EecCCceee-eecCCCHHHHHHHHHHcC--CCEEEE
Q 045468 128 LKLTNEDVILYSAKVIPGNESRVM----KMLNRISEIGS--TI-VMGRNEGLH-TSGHGYRGELEEVLKLVK--PQHFLP 197 (221)
Q Consensus 128 ~~~~~~~~vI~s~~~~pg~e~~~~----~~~~~l~~~g~--~v-~~~~~~~~h-~SGHA~~~dL~~~i~~i~--Pk~iiP 197 (221)
++|++|||+|++||+..... .-.+.+.+.|. .+ +......+| +||||+++||+.|++.++ |+++||
T Consensus 530 ----~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~ 605 (640)
T 2xr1_A 530 ----PRNTLVFVGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFSGHSDRRQLMEYVKRMQPRPERVFT 605 (640)
T ss_dssp ----TTCEEEECSCCCTTCHHHHHHTTCCC-----------CCCCCSEEEECCCCSCSCCHHHHHHHHHTCBSCCSEEEE
T ss_pred ----CCCEEEEecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEEEEccccccCCHHHHHHHHHHhccCCCEEEE
Confidence 89999999999999854320 00233323343 22 111113689 999999999999999999 999999
Q ss_pred cCCChHHHHHHHHHHH-hcCCC
Q 045468 198 IHGELLFLKEHELLGR-STGIR 218 (221)
Q Consensus 198 VHge~~~~~~~~~~~~-~~g~~ 218 (221)
||||++++.+++++++ +.|++
T Consensus 606 vHGe~~~~~~~a~~~~~~~g~~ 627 (640)
T 2xr1_A 606 EHGDEKACVDLASSVYKKLKIE 627 (640)
T ss_dssp ESSCHHHHHHHHHHHHHHHCCE
T ss_pred ECCCHHHHHHHHHHHHHHcCCe
Confidence 9999999999999996 56863
No 8
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.79 E-value=5.6e-19 Score=156.31 Aligned_cols=197 Identities=17% Similarity=0.167 Sum_probs=136.9
Q ss_pred CccccCCCCCCCC--CCCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcC-----CeEEEEcccHHHHHH
Q 045468 1 MMSDSTNVLSPGR--TTSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTG-----RKLVFVGMSLRTYLD 73 (221)
Q Consensus 1 Li~EsT~~~~~~~--~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~g-----R~~vi~~~~~~~~~~ 73 (221)
||+||||.++.+. ..++.++.+.+.+++. .+|+|+||+|+ ++|.|+++.++.+++ .++++++.-....++
T Consensus 183 LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~-~gg~vlIp~fa--~gR~qell~~l~~~~~~~~~~pi~~~s~~a~~~~~ 259 (431)
T 3iek_A 183 VLAEGTYGDRPHRPYRETVREFLEILEKTLS-QGGKVLIPTFA--VERAQEILYVLYTHGHRLPRAPIYLDSPMAGRVLS 259 (431)
T ss_dssp EEEECTTTTCCCCCHHHHHHHHHHHHHHHHH-TTCEEEEECCT--TTHHHHHHHHHHHHGGGSCCCCEEEECHHHHHHHH
T ss_pred EEEEcccCCcCCCChHHHHHHHHHHHHHHHH-cCCeEEEEecc--chHHHHHHHHHHHHHHhccCCCEEEeChHHHHHHH
Confidence 6899999998643 3456677778888764 58999999999 999999999999987 477777533334444
Q ss_pred HHHH--------------CCC--CCCCCCCcc-Chhh---hhhcCCCCEEEEecCC--CccHHHHHHHHhcCCCCCcccC
Q 045468 74 AAWK--------------DGK--APIDPSTLV-KVED---IDAYAPKDLLIVTTGS--QAEPRAALNLASYGGSHSLKLT 131 (221)
Q Consensus 74 ~~~~--------------~g~--~~~~~~~~v-~~~~---~~~~~~~~~vi~~~g~--~~e~~~~l~~~~~~~~~~~~~~ 131 (221)
.+.+ .+. +.++.-.++ +.++ +...+.+.+++..+|| .|...++|.+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~p~viia~~gm~~~G~~~~~l~~~~~~-------- 331 (431)
T 3iek_A 260 LYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKALNRAPGPMVVLAGSGMLAGGRILHHLKHGLSD-------- 331 (431)
T ss_dssp HGGGGGGGSCHHHHHHHHTTSCTTCCTTEEECCSHHHHHHHHHSCSSEEEEESCTTSSSSHHHHHHHHHTTC--------
T ss_pred HHHHhHHHHHHHHHHHHhcCCCCCCCCCeEEeCCHHHHHHHhcCCCCeEEEecCCCCCCChHHHHHHHhcCC--------
Confidence 3322 111 111111122 2222 3344555555555565 46678899988876
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHH---------HHcCCeEEecCCcee-eeecCCCHHHHHHHHHHcCCCEEEEcCCC
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRI---------SEIGSTIVMGRNEGL-HTSGHGYRGELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l---------~~~g~~v~~~~~~~~-h~SGHA~~~dL~~~i~~i~Pk~iiPVHge 201 (221)
++++|||.+++++|+-.+ ++++.- ....++|. .+ .+||||++++|.+|++.++ .++.||||
T Consensus 332 ~~n~ii~~gyq~~gt~g~--~l~~~~~~v~~~g~~~~v~a~v~-----~~~~~saHad~~~l~~~~~~~~--~v~lvHge 402 (431)
T 3iek_A 332 PRNALVFVGYQPQGGLGA--EIIARPPAVRILGEEVPLRASVH-----TLGGFSGHAGQDELLDWLQGEP--RVVLVHGE 402 (431)
T ss_dssp TTCEEEECSCCCTTSHHH--HHHTCCSEEEETTEEEECCSEEE-----ECGGGCSSCCHHHHHHHHTTCS--EEEEESSC
T ss_pred CCCeEEEECCCCCCChHH--HhhcCCcEEEECCEEEEEEEEEE-----EECCccccCCHHHHHHHHHhCC--eEEEECCC
Confidence 899999999999998764 232210 01112222 45 5899999999999999775 89999999
Q ss_pred hHHHHHHHHHHHhcCC
Q 045468 202 LLFLKEHELLGRSTGI 217 (221)
Q Consensus 202 ~~~~~~~~~~~~~~g~ 217 (221)
...+.++++.+++.|.
T Consensus 403 ~~~~~~l~~~l~~~~~ 418 (431)
T 3iek_A 403 EEKLLALGKLLALRGQ 418 (431)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999988775
No 9
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.75 E-value=4.1e-18 Score=151.77 Aligned_cols=197 Identities=12% Similarity=0.144 Sum_probs=122.5
Q ss_pred CccccCCCCCCCCC--CCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHc--------CCeEEEEcccHHH
Q 045468 1 MMSDSTNVLSPGRT--TSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLT--------GRKLVFVGMSLRT 70 (221)
Q Consensus 1 Li~EsT~~~~~~~~--~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~--------gR~~vi~~~~~~~ 70 (221)
||+|||+....+.. .++.++.+.+.+.+. .+|+|+||+|+ ++|+|+++....++ +.++++++.-...
T Consensus 201 Li~Esty~~~~~~~~~~~~~~l~~~i~~~~~-~~g~vlip~fa--~gr~qell~~l~~~~~~~~~~~~~pi~~~s~~a~~ 277 (459)
T 2i7t_A 201 LIIESTYGTHIHEKREEREARFCNTVHDIVN-RGGRGLIPVFA--LGRAQELLLILDEYWQNHPELHDIPIYYASSLAKK 277 (459)
T ss_dssp EEEECTTTTCCCCCHHHHHHHHHHHHHHHHH-TTCEEEEECCS--SSSHHHHHHHHHHHHHHCGGGTTSCEEEC------
T ss_pred EEECCCCCCCCCCChHHHHHHHHHHHHHHHH-CCCEEEEEecc--hhHHHHHHHHHHHHHHhcCCCCCccEEEECHHHHH
Confidence 58899999865433 345567777888765 57899999999 99999999887654 4467666533222
Q ss_pred HHHHHHHCC-CCCC-------CCCCc----c----ChhhhhhcCCCCEEEEecCC--CccHHHHHHHHhcCCCCCcccCC
Q 045468 71 YLDAAWKDG-KAPI-------DPSTL----V----KVEDIDAYAPKDLLIVTTGS--QAEPRAALNLASYGGSHSLKLTN 132 (221)
Q Consensus 71 ~~~~~~~~g-~~~~-------~~~~~----v----~~~~~~~~~~~~~vi~~~g~--~~e~~~~l~~~~~~~~~~~~~~~ 132 (221)
.++.+.+.. +++. ..+.| + +.+++. .....+++..+|| .|....+|.+++.+ +
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~viia~~gm~~~g~~~~~l~~~~~~--------~ 348 (459)
T 2i7t_A 278 CMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFD-DIGPSVVMASPGMMQSGLSRELFESWCTD--------K 348 (459)
T ss_dssp ---------------------------CCSEEECCCTTSSC-CCSSEEEEESCTTCSSHHHHHHHHHHTTC--------T
T ss_pred HHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhc-CCCCeEEEEcCcccCCCHHHHHHHHHcCC--------C
Confidence 222222210 1100 00001 0 111221 1233334444454 25567888888775 7
Q ss_pred CCEEEEEecCCCCcHHHHHHHHHH------HH----HcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh
Q 045468 133 EDVILYSAKVIPGNESRVMKMLNR------IS----EIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e~~~~~~~~~------l~----~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
.+++|+++|+.+|+-.. ++++. +. ...+++. .+++|+||+.+||.+|++.++|+.+++||||.
T Consensus 349 ~~~ii~~gy~~~gt~g~--~l~~~~~~~~~~~g~~~~~~~~v~-----~~~~S~Had~~~l~~~i~~~~p~~v~~vHGe~ 421 (459)
T 2i7t_A 349 RNGVIIAGYCVEGTLAK--HIMSEPEEITTMSGQKLPLKMSVD-----YISFSAHTDYQQTSEFIRALKPPHVILVHGEQ 421 (459)
T ss_dssp TCEEEECSCCCTTSHHH--HHTTCCSEEECTTSCEEECCSEEE-----ECCCSCCCCHHHHHHHHHHHCCSEEEEESSCH
T ss_pred CCeEEEEecCCCCChHH--HHhhCCceeeeeCCcEEEEEEEEE-----EeeecccCCHHHHHHHHHhcCCCeEEEeCCCH
Confidence 89999999999998553 12210 00 0123333 57899999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hcC
Q 045468 203 LFLKEHELLGR-STG 216 (221)
Q Consensus 203 ~~~~~~~~~~~-~~g 216 (221)
..+..+++.++ +.|
T Consensus 422 ~~~~~~~~~l~~~~~ 436 (459)
T 2i7t_A 422 NEMARLKAALIREYE 436 (459)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 99999988766 444
No 10
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.33 E-value=5.6e-12 Score=109.19 Aligned_cols=191 Identities=17% Similarity=0.108 Sum_probs=104.2
Q ss_pred CccccCCCCCCCCCCCHHHHHHHHHH-HHHh--cCCcEEEEeccccHHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHH
Q 045468 1 MMSDSTNVLSPGRTTSESVVKDALMR-HVSA--AKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWK 77 (221)
Q Consensus 1 Li~EsT~~~~~~~~~sE~~v~~~i~~-~~~~--~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~ 77 (221)
||+|+|+.+......++.++.+.+.+ +++. .+++++|.+++.+++|.|.++.+|+++||++++.++.+ .++. -
T Consensus 162 Li~EsTy~~~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~g~ki~v~~~~~-~il~---~ 237 (367)
T 4b87_A 162 LYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKY-KTLQ---C 237 (367)
T ss_dssp EEECCTTCSTTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHTTCCEECCHHHH-HHHH---T
T ss_pred EEEecccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHhCCEEEEeHHHH-HHHH---h
Confidence 68999999876555788887764433 3332 36888888888889999999999999999999987655 3322 1
Q ss_pred CCCCCCCCCCccChhhhhhcCCCCEEEEecCCC---ccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHH
Q 045468 78 DGKAPIDPSTLVKVEDIDAYAPKDLLIVTTGSQ---AEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKML 154 (221)
Q Consensus 78 ~g~~~~~~~~~v~~~~~~~~~~~~~vi~~~g~~---~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~ 154 (221)
.+.... ...++.+ +.+..+-++.-++ ..+..+|.....+.+..+.+.|.+ +.|+.. ...+.
T Consensus 238 l~~~~~--~~~~t~d-----~~~~~vh~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~ptg-w~~~~~--------~~~~~ 301 (367)
T 4b87_A 238 LNIPEI--NSLITTD-----MCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTG-WTHSNK--------FTRIA 301 (367)
T ss_dssp TCCTTH--HHHEESC-----GGGCSEEEEEGGGCSHHHHHHHHHSGGGCCCEEEEEEECC-------------------C
T ss_pred cCCchh--hhhcccC-----CccceEEEeecCcCCHHHHHHHHHHhhcccccEEEEcCcc-cccCCC--------CCccc
Confidence 121100 0011111 1111122332221 112233433222221222222222 122211 00000
Q ss_pred HHH--HHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh------HHHHHHHHHHHhcC
Q 045468 155 NRI--SEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL------LFLKEHELLGRSTG 216 (221)
Q Consensus 155 ~~l--~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~------~~~~~~~~~~~~~g 216 (221)
+.. .+-.+.++ .+-.|+|++..||++++..++|+.+||+|+-. .+..-+.++..|.|
T Consensus 302 ~~~~~~~~~~~~~-----~vpySeHss~~EL~~fv~~l~p~~iiptv~~~~~~~~~~m~~~~~~w~~~~~ 366 (367)
T 4b87_A 302 DVIPQTKGNISIY-----GIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAG 366 (367)
T ss_dssp CCCCEEETTEEEE-----EECCCSSCCHHHHHHHHHHHCCSEEEECSSCSSHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCceEEE-----EEeccCCCCHHHHHHHHHhcCCCeEECeecCCCHHHHHHHHHHHHHHHhhcC
Confidence 000 01124555 67789999999999999999999999999532 23333444555555
No 11
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.27 E-value=7.2e-12 Score=116.95 Aligned_cols=144 Identities=9% Similarity=0.071 Sum_probs=101.9
Q ss_pred CccccCCCCCCCCCC-CHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcC-----------CeEEEEcccH
Q 045468 1 MMSDSTNVLSPGRTT-SESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTG-----------RKLVFVGMSL 68 (221)
Q Consensus 1 Li~EsT~~~~~~~~~-sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~g-----------R~~vi~~~~~ 68 (221)
||+||||+.+.+... ...++.+.+.+++ +.+|+|+||+|+ .+|+|+++.++.+++ |+++++|+.+
T Consensus 210 LI~EsTy~~~~h~~~~~~~~l~~~i~~~l-~~~G~VlIp~fa--~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a 286 (717)
T 2i7x_A 210 IITTLDRFGSSQPFKKRSKIFKDTLKKGL-SSDGSVIIPVDM--SGKFLDLFTQVHELLFESTKINAHTQVPVLILSYAR 286 (717)
T ss_dssp EEECCSCCCCSSCHHHHHHHHHHHHHHHT-STTCEEEEEECT--TTHHHHHHHHHHHHHTTC-------CCCEEEECTTT
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEEecc--chHHHHHHHHHHHhhhhhhccccCCCceEEEECHHH
Confidence 689999998754321 1224444455544 357999999999 599999998886654 7999999988
Q ss_pred HHHHHHHHHC-CCCCCC--------C--CCcc--------ChhhhhhcCCCCEEEEecCCCccHH-HHHHHHhcCCCCCc
Q 045468 69 RTYLDAAWKD-GKAPID--------P--STLV--------KVEDIDAYAPKDLLIVTTGSQAEPR-AALNLASYGGSHSL 128 (221)
Q Consensus 69 ~~~~~~~~~~-g~~~~~--------~--~~~v--------~~~~~~~~~~~~~vi~~~g~~~e~~-~~l~~~~~~~~~~~ 128 (221)
...++++.+. +++..+ . ..|+ +.+++..+++ .+||++|| +|++. ++|.+++.+
T Consensus 287 ~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~~~l~~~~~~~l~~~~~-p~VI~aSG-~gG~~~~~L~~~a~~----- 359 (717)
T 2i7x_A 287 GRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRIKIIAPNELSKYPG-SKICFVSE-VGALINEVIIKVGNS----- 359 (717)
T ss_dssp THHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTTEEECCGGGGGGCCS-CEEEEEES-CHHHHHHHHHHHSSC-----
T ss_pred HHHHHHHHHHHHHhChHHHHHHhcccccCCccccccCccCCHHHHhhCCC-CEEEEECC-CCHHHHHHHHHHcCC-----
Confidence 7888887764 444310 0 1222 4566776665 57899999 77775 489999986
Q ss_pred ccCCCCEEEEEecCCC-CcHHHHHHHHHHHHH
Q 045468 129 KLTNEDVILYSAKVIP-GNESRVMKMLNRISE 159 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~p-g~e~~~~~~~~~l~~ 159 (221)
++|+|||+++++| |+-.. +++++..+
T Consensus 360 ---~~n~VIf~g~~~p~gTlgr--~l~~~~~~ 386 (717)
T 2i7x_A 360 ---EKTTLILTKPSFECASSLD--KILEIVEQ 386 (717)
T ss_dssp ---TTEEEEECSSCCTTCHHHH--HHHHHHHT
T ss_pred ---CcCEEEEEcCCCCCCChHH--HHHhhhhh
Confidence 8999999999995 87654 45555444
No 12
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=90.92 E-value=1 Score=36.05 Aligned_cols=44 Identities=9% Similarity=0.016 Sum_probs=35.8
Q ss_pred ecCCCHHHHHHHHHHcCCCEEEEcCCCh-----HHHHHHHHHHHhcCCC
Q 045468 175 SGHGYRGELEEVLKLVKPQHFLPIHGEL-----LFLKEHELLGRSTGIR 218 (221)
Q Consensus 175 SGHA~~~dL~~~i~~i~Pk~iiPVHge~-----~~~~~~~~~~~~~g~~ 218 (221)
.+|-+.+|..++++.++|+.+||+|=.. ....+..+.+++.|++
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~~ 250 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNNIE 250 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTTCT
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHcCCC
Confidence 6799999999999999999999999752 2345666777777763
No 13
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=90.33 E-value=0.41 Score=37.57 Aligned_cols=62 Identities=11% Similarity=0.038 Sum_probs=39.6
Q ss_pred CCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh
Q 045468 133 EDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
+..++|++-..+..+. .+...+. ++++... .....+|.+.++..++++.++|+.++|+|=..
T Consensus 115 g~~i~~~GDt~~~~~~---~~~~~~~--~~Dvlil---~~g~~~h~~~~~a~~~~~~~~~k~vi~~H~~~ 176 (220)
T 1vjn_A 115 GIKVCHLGDLGHVLTP---AQVEEIG--EIDVLLV---PVGGTYTIGPKEAKEVADLLNAKVIIPMHYKT 176 (220)
T ss_dssp TEEEEECTTCCSCCCH---HHHHHHC--CCSEEEE---ECCSSSSCCHHHHHHHHHHTTCSEEEEESCCC
T ss_pred CeEEEEeCCCCCcchH---HHHHhhC--CCCEEEE---cCCCcCcCCHHHHHHHHHhcCCCEEEEEeccc
Confidence 3467777765433221 1223332 4554411 22345799999999999999999999999654
No 14
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=87.98 E-value=0.48 Score=44.09 Aligned_cols=47 Identities=6% Similarity=-0.136 Sum_probs=41.9
Q ss_pred ceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcC
Q 045468 170 EGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTG 216 (221)
Q Consensus 170 ~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g 216 (221)
..+.+||=.+...|+.++..++|+++|-|||...+..++++.++..+
T Consensus 656 ~fiD~~g~~D~rs~~~i~~~~~Prklilv~g~~~~~~~l~~~~~~~~ 702 (717)
T 2i7x_A 656 VILNLQSLVDQRSASIIWPSLKSRKIVLSAPKQIQNEEITAKLIKKN 702 (717)
T ss_dssp EECCCCCSCCHHHHHHHGGGSCCSEEEECSCGGGSCHHHHHHHHHTT
T ss_pred EEEecCCCCcHHHHHHHHHhcCCcEEEEeCCCHHHHHHHHHHHHhcC
Confidence 36889999999999999999999999999999988888888766544
No 15
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=86.38 E-value=2.4 Score=35.71 Aligned_cols=78 Identities=15% Similarity=0.061 Sum_probs=51.5
Q ss_pred cCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC--CCEEEEcC--CChHHH
Q 045468 130 LTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK--PQHFLPIH--GELLFL 205 (221)
Q Consensus 130 ~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~--Pk~iiPVH--ge~~~~ 205 (221)
+++||.||.+....+++. +.+...|++++....+. -.++-+.++|...+..-+ ++.++|+| |...++
T Consensus 75 ~~~Gd~Vi~~~~~~~~~~-------~~~~~~G~~~~~v~~~~--~~~~~d~~~l~~~i~~~~~~tk~v~~~~~~G~~~~~ 145 (377)
T 3ju7_A 75 RKKGKYALMPSFTFPATP-------LAAIWCGLEPYFIDISI--DDWYMDKTVLWDKIEELKEEVAIVVPYATFGSWMNL 145 (377)
T ss_dssp CTTCCEEEEESSSCTHHH-------HHHHHTTCEEEEECBCT--TTCSBCHHHHHHHHHHHGGGEEEECCBCGGGBCCCC
T ss_pred CCCcCEEEECCCCcHHHH-------HHHHHcCCEEEEEecCC--ccCCcCHHHHHHHHhcCCCCceEEEEECCCCCccCH
Confidence 358999998887655432 33456798876322110 246778999998875445 88999998 333456
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.+++|+ .|+
T Consensus 146 ~~i~~la~-~~~ 156 (377)
T 3ju7_A 146 EEYEELEK-KGV 156 (377)
T ss_dssp HHHHHHHH-TTC
T ss_pred HHHHHHHh-cCC
Confidence 67777777 774
No 16
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=85.50 E-value=3.2 Score=32.86 Aligned_cols=68 Identities=7% Similarity=0.060 Sum_probs=44.0
Q ss_pred CCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecC----CceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHH
Q 045468 133 EDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGR----NEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLF 204 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~----~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~ 204 (221)
+..++|++-..+-.+. +...+...++++.... .......||.+.++..++++.++|+.+||+|=....
T Consensus 156 ~~~i~~~GDt~~~~~~----~~~~l~~~~~Dlli~e~t~~~~~~~~~~H~~~~~a~~~~~~~~~k~lil~H~s~~~ 227 (258)
T 3g1p_A 156 HSRVAWLSDTAGLPEK----TLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQF 227 (258)
T ss_dssp SCEEEEECSCSSCCHH----HHHHHHHTCCSEEEEECCBSSCSSCCSSSCBHHHHHHHHHHHCCSCEEEESCCHHH
T ss_pred CcEEEEECCCCCCCHH----HHHHHHhCCCCEEEEeCCCCCccccCCCCCCHHHHHHHHHHcCCCEEEEECccCcc
Confidence 4467888765332232 2234433566665211 111224689999999999999999999999987543
No 17
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=84.02 E-value=7.3 Score=34.07 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=62.3
Q ss_pred EEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee--ecCCC
Q 045468 102 LLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT--SGHGY 179 (221)
Q Consensus 102 ~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~--SGHA~ 179 (221)
-+++++|.+.-....+.-+.. +++|.|+...+..+++. ..+...|++++.-+ +.. ..+-+
T Consensus 159 ~i~~t~G~~~al~~~~~~l~~--------~~gd~Vlv~~p~y~~~~-------~~~~~~g~~~~~~~---~~~~~~~~~d 220 (500)
T 3tcm_A 159 DIFLTDGASPGVHLMMQLLIR--------NEKDGILVPIPQYPLYS-------ASIALHGGALVPYY---LNESTGWGLE 220 (500)
T ss_dssp GEEEESSSHHHHHHHHHHHCC--------STTEEEEEEESCCTHHH-------HHHHHTTCEEEEEE---CBTTTTSBCC
T ss_pred cEEEcCCHHHHHHHHHHHHcC--------CCCCEEEEeCCCcHhHH-------HHHHHcCCEEEEEe---cccccCCCCC
Confidence 366677764333333332221 27889998887666433 33455688776211 111 23889
Q ss_pred HHHHHHHHHHc-----CCCEEEEcCCChH--------HHHHHHHHHHhcCC
Q 045468 180 RGELEEVLKLV-----KPQHFLPIHGELL--------FLKEHELLGRSTGI 217 (221)
Q Consensus 180 ~~dL~~~i~~i-----~Pk~iiPVHge~~--------~~~~~~~~~~~~g~ 217 (221)
.++|++.++.. +|+.++-+|.-+| ++.+.+++|++.|+
T Consensus 221 ~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~ 271 (500)
T 3tcm_A 221 TSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGL 271 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 99999999886 7888887776554 68888888888774
No 18
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=83.96 E-value=0.51 Score=37.39 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=36.0
Q ss_pred eecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCC
Q 045468 174 TSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGI 217 (221)
Q Consensus 174 ~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~ 217 (221)
..+|.+.++..++++.++|+.+||+|=...+..++++.+.+.|+
T Consensus 184 ~~~h~~~~ea~~~~~~l~~k~vip~H~~~~~~~~~~~~l~~~gi 227 (235)
T 3kl7_A 184 QPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGI 227 (235)
T ss_dssp TTTSCCHHHHHHHHHHHCCSEEEEESCTTCCTTHHHHHTTTSCC
T ss_pred CCcccCHHHHHHHHHHcCCCEEEEEcCCCCCHHHHHHHHhhCCC
Confidence 46799999999999999999999999766555566666666675
No 19
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=82.62 E-value=6.1 Score=32.94 Aligned_cols=79 Identities=20% Similarity=0.106 Sum_probs=53.9
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh-----HHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-----LFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-----~~~ 205 (221)
+++|.|+......+++ .+.+.+...|++++..+ ....|.-+.++|++.++.-+++.++..|..+ ..+
T Consensus 84 ~~gd~Vl~~~~~~~~~-----~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 155 (416)
T 3isl_A 84 EPEDDVLIPIYGRFGY-----LLTEIAERYGANVHMLE---CEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPL 155 (416)
T ss_dssp CTTCEEEEEESSHHHH-----HHHHHHHHTTCEEEEEE---CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred CCCCEEEEecCCcccH-----HHHHHHHhcCCeeEEEe---cCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCH
Confidence 4889988887533321 14455667888776322 2224566899999999866889998888432 247
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 156 ~~i~~l~~~~~~ 167 (416)
T 3isl_A 156 KAIGEACRTEDA 167 (416)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 778888888874
No 20
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=82.08 E-value=21 Score=29.80 Aligned_cols=82 Identities=9% Similarity=0.055 Sum_probs=53.8
Q ss_pred CCCEEEEecCCCcc----HH-HHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceee
Q 045468 99 PKDLLIVTTGSQAE----PR-AALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLH 173 (221)
Q Consensus 99 ~~~~vi~~~g~~~e----~~-~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h 173 (221)
....+++.++..+. .+ ..+.++.. ++++.+...+|+++. ++......+.+.|...|+.++. ..++
T Consensus 303 ~~d~ii~gsp~~~~~~~~~~~~~l~~l~~-----~~l~~k~~~~f~t~g--~~~~a~~~l~~~l~~~G~~~~~---~~~~ 372 (402)
T 1e5d_A 303 DAGAVIVGSPTHNNGILPYVAGTLQYIKG-----LRPQNKIGGAFGSFG--WSGESTKVLAEWLTGMGFDMPA---TPVK 372 (402)
T ss_dssp TCSEEEEECCCBTTBCCHHHHHHHHHHHH-----TCCCSCEEEEEEEES--SSCHHHHHHHHHHHHTTCBCCS---CCEE
T ss_pred HCCEEEEECCccCCCchHHHHHHHHHhhh-----cccCCCEEEEEEcCC--CccHHHHHHHHHHHHCCCEEec---CceE
Confidence 45678888876443 22 22333322 124455677888875 3444556788999999998872 2588
Q ss_pred eecCCCHHHHHHHHHHc
Q 045468 174 TSGHGYRGELEEVLKLV 190 (221)
Q Consensus 174 ~SGHA~~~dL~~~i~~i 190 (221)
++||++.++++++.+..
T Consensus 373 ~~~~p~~~~~~~~~~~~ 389 (402)
T 1e5d_A 373 VKNVPTHADYEQLKTMA 389 (402)
T ss_dssp EESSCCHHHHHHHHHHH
T ss_pred EeeCCCHHHHHHHHHHH
Confidence 99999999988776654
No 21
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=80.19 E-value=11 Score=30.90 Aligned_cols=75 Identities=8% Similarity=-0.089 Sum_probs=52.5
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-------- 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-------- 202 (221)
+++|.|+...+..+++.. .+...|++++..+ ....++-+.++|++.++.-+++.++-.|-.+
T Consensus 107 ~~gd~Vl~~~~~~~~~~~-------~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 176 (367)
T 3euc_A 107 RPGAKVMAPVPGFVMYAM-------SAQFAGLEFVGVP---LRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDA 176 (367)
T ss_dssp CTTCEEEEEESCSCCSCH-------HHHTTTCEEEEEE---CCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCH
T ss_pred CCCCEEEEcCCCHHHHHH-------HHHHcCCeEEEec---CCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCH
Confidence 378999888877776543 2445788776322 1125678999999999887899887655433
Q ss_pred HHHHHHHHHHHhc
Q 045468 203 LFLKEHELLGRST 215 (221)
Q Consensus 203 ~~~~~~~~~~~~~ 215 (221)
.++.+.++++++.
T Consensus 177 ~~l~~i~~~~~~~ 189 (367)
T 3euc_A 177 ADMEAIVRAAQGS 189 (367)
T ss_dssp HHHHHHHHHTBTT
T ss_pred HHHHHHHHhhhhc
Confidence 3678888888877
No 22
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=77.87 E-value=5.2 Score=33.31 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=53.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.|+.+....++ . .+.+.+...|++++..+ ....|.-+.++|++.++.-+|+.++..| |-...+
T Consensus 86 ~~gd~Vl~~~~~~~~---~--~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 157 (411)
T 3nnk_A 86 RPGDKVLVPVFGRFG---H--LLCEIARRCRAEVHTIE---VPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPL 157 (411)
T ss_dssp CTTCEEEEEECSHHH---H--HHHHHHHHTTCEEEEEE---CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred CCCCEEEEecCCchH---H--HHHHHHHHcCCeEEEEe---cCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccH
Confidence 378898888753222 1 14456677888776311 2224556889999998877899999998 333346
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 158 ~~i~~l~~~~~~ 169 (411)
T 3nnk_A 158 AELGEICRRYDA 169 (411)
T ss_dssp TTHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 677888888774
No 23
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=75.79 E-value=22 Score=29.31 Aligned_cols=79 Identities=14% Similarity=-0.025 Sum_probs=51.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCce---eeeecCCCHHHHHHHHHHcCCCEEEEcCCChHH---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEG---LHTSGHGYRGELEEVLKLVKPQHFLPIHGELLF--- 204 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~---~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~--- 204 (221)
+++|.|+...+..++ ..+.+...|++++..+... ....+..+.++|.+.++. +++.++-.|-.+|.
T Consensus 124 ~~gd~vl~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~ 195 (407)
T 3nra_A 124 ARGDKVAIVQPDYFA-------NRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVV 195 (407)
T ss_dssp CTTCEEEEEESCCTH-------HHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCC
T ss_pred CCCCEEEEcCCcccc-------hHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcc
Confidence 478888887764443 2344556788776211100 013455678888888876 88888877765553
Q ss_pred -----HHHHHHHHHhcCC
Q 045468 205 -----LKEHELLGRSTGI 217 (221)
Q Consensus 205 -----~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 196 ~~~~~l~~i~~~~~~~~~ 213 (407)
T 3nra_A 196 YSAEEIGQIAALAARYGA 213 (407)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCC
Confidence 8888999988874
No 24
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=75.71 E-value=12 Score=30.75 Aligned_cols=79 Identities=13% Similarity=0.047 Sum_probs=51.3
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH-cCCCEEEEcCC-----ChHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL-VKPQHFLPIHG-----ELLF 204 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~-i~Pk~iiPVHg-----e~~~ 204 (221)
+++|.|+.+....+++. ........|++++..+ ....|+-+.++|++.++. -+|+.++..|. -...
T Consensus 81 ~~gd~Vl~~~~~~~~~~-----~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 152 (392)
T 2z9v_A 81 SPDDVVLNLASGVYGKG-----FGYWAKRYSPHLLEIE---VPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP 152 (392)
T ss_dssp CTTCCEEEEESSHHHHH-----HHHHHHHHCSCEEEEE---CCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred CCCCEEEEecCCcccHH-----HHHHHHHcCCceEEee---CCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence 37888888876444431 2233455687766211 122467889999998875 36888877774 3345
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 153 l~~i~~l~~~~~~ 165 (392)
T 2z9v_A 153 IDAIGALVSAHGA 165 (392)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 7788889998874
No 25
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=75.22 E-value=16 Score=30.07 Aligned_cols=74 Identities=12% Similarity=-0.003 Sum_probs=45.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee----cCCCHHHHHHHHHHcCCCEEEEcCCChH---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS----GHGYRGELEEVLKLVKPQHFLPIHGELL--- 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S----GHA~~~dL~~~i~~i~Pk~iiPVHge~~--- 203 (221)
+++|.|+...+..+++.. .+...|++++ .+... +.-+.++|++.++. +++.++-.|-.+|
T Consensus 109 ~~gd~vl~~~~~~~~~~~-------~~~~~g~~~~-----~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~ 175 (389)
T 1gd9_A 109 KDGEEVLIPTPAFVSYAP-------AVILAGGKPV-----EVPTYEEDEFRLNVDELKKYVTD-KTRALIINSPCNPTGA 175 (389)
T ss_dssp CTTCEEEEEESCCTTHHH-------HHHHHTCEEE-----EEECCGGGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCCCEEEEcCCCchhHHH-------HHHHCCCEEE-----EeccCCccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCc
Confidence 478898888876666542 2344688776 23222 22356666665543 4565554453332
Q ss_pred -----HHHHHHHHHHhcCC
Q 045468 204 -----FLKEHELLGRSTGI 217 (221)
Q Consensus 204 -----~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 176 ~~~~~~l~~l~~~~~~~~~ 194 (389)
T 1gd9_A 176 VLTKKDLEEIADFVVEHDL 194 (389)
T ss_dssp CCCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 78889999998874
No 26
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=75.07 E-value=15 Score=30.09 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=52.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH-cCCCEEEEcC-----CChHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL-VKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~-i~Pk~iiPVH-----ge~~~~ 205 (221)
++|.|+......++. .+.+.....|++++..+ ....|.-+.++|++.++. -+++.++..| |....+
T Consensus 94 ~gd~vl~~~~~~~~~-----~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l 165 (386)
T 2dr1_A 94 KGGKVLVTIIGAFGK-----RYKEVVESNGRKAVVLE---YEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPL 165 (386)
T ss_dssp TTCEEEEEESSHHHH-----HHHHHHHHTTCEEEEEE---CCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCH
T ss_pred CCCeEEEEcCCchhH-----HHHHHHHHhCCceEEEe---cCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCH
Confidence 788888877643331 13445566788776321 112456789999998875 3788888877 444568
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 166 ~~i~~l~~~~~~ 177 (386)
T 2dr1_A 166 PELAKVAKEHDK 177 (386)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 888899998875
No 27
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=74.58 E-value=17 Score=30.25 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=52.9
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc--CCCEEEEcC--CChHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV--KPQHFLPIH--GELLFLK 206 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i--~Pk~iiPVH--ge~~~~~ 206 (221)
+++|.|+...+..+++... +...|++++..+. ...|+-+.++|++.++.- +++.++..| |....+.
T Consensus 70 ~~gd~Vl~~~~~~~~~~~~-------~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~~~v~~~~~~G~~~~l~ 139 (394)
T 1o69_A 70 KQDDIVLASSFTFIASVAP-------ICYLKAKPVFIDC---DETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMD 139 (394)
T ss_dssp CTTCEEEEESSSCGGGTHH-------HHHTTCEEEEECB---CTTSSBCHHHHHHHHHHCSSCCCEEEEECGGGCCCCHH
T ss_pred CCCCEEEECCCccHHHHHH-------HHHcCCEEEEEEe---CCCCCcCHHHHHHHHhcccCCceEEEEECCCCChhhHH
Confidence 4788988888776666432 2236887763221 135678899999988765 678777665 4455678
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 140 ~i~~l~~~~~~ 150 (394)
T 1o69_A 140 EIVEICKENDI 150 (394)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 88888888874
No 28
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=74.02 E-value=8.3 Score=31.86 Aligned_cols=78 Identities=18% Similarity=0.184 Sum_probs=51.0
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC-----ChHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG-----ELLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-----e~~~~~ 206 (221)
++|.|++.....+++ .........|++++..+ ....|+-+.++|++.++..+++.++..|. -...+.
T Consensus 93 ~gd~vl~~~~~~~~~-----~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~ 164 (393)
T 2huf_A 93 DGDVILIGHTGHWGD-----RSADMATRYGADVRVVK---SKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLE 164 (393)
T ss_dssp TTCEEEEEESSHHHH-----HHHHHHHHTTCEEEEEE---CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCT
T ss_pred CCCEEEEECCCcchH-----HHHHHHHHcCCeeEEEe---CCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHH
Confidence 788888887644442 12333456788776322 12246788999999887668898888774 333466
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 165 ~i~~~~~~~~~ 175 (393)
T 2huf_A 165 GVGALCHQHNC 175 (393)
T ss_dssp THHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 77788888774
No 29
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=73.23 E-value=31 Score=28.07 Aligned_cols=73 Identities=11% Similarity=0.069 Sum_probs=47.2
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChH--------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELL-------- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~-------- 203 (221)
++|.|+...+..+++. +.+...|++++. +.....-+.++|++.++. +++.++-.|-.+|
T Consensus 104 ~gd~vl~~~~~~~~~~-------~~~~~~g~~~~~-----~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~~~~~ 170 (377)
T 3fdb_A 104 AQSKVIVPTPAYPPFF-------HLLSATQREGIF-----IDATGGINLHDVEKGFQA-GARSILLCNPYNPLGMVFAPE 170 (377)
T ss_dssp TTCCEEEEESCCTHHH-------HHHHHHTCCEEE-----EECTTSCCHHHHHHHHHT-TCCEEEEESSBTTTTBCCCHH
T ss_pred CCCEEEEcCCCcHhHH-------HHHHHcCCEEEE-----ccCCCCCCHHHHHHHhcc-CCCEEEEeCCCCCCCCCCCHH
Confidence 7888888776554432 334556887762 211111678888887765 5777776665433
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 171 ~l~~l~~~~~~~~~ 184 (377)
T 3fdb_A 171 WLNELCDLAHRYDA 184 (377)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 68888888998875
No 30
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=73.19 E-value=17 Score=29.75 Aligned_cols=76 Identities=8% Similarity=0.030 Sum_probs=51.6
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChH-----HHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELL-----FLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~-----~~~ 206 (221)
++|.|+.+....+++. +.+...|++++..+ ....|+-+.++|++.++..+++.++-.|..++ .+.
T Consensus 122 ~gd~vl~~~~~~~~~~-------~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~ 191 (397)
T 3f9t_A 122 EHPKIIVPITAHFSFE-------KGREMMDLEYIYAP---IKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIE 191 (397)
T ss_dssp SSCEEEEETTCCTHHH-------HHHHHHTCEEEEEC---BCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHH
T ss_pred CCeEEEECCcchhHHH-------HHHHHcCceeEEEe---eCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHH
Confidence 5888888876555432 23334588776322 22247779999999998778888886664433 578
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 192 ~i~~l~~~~~~ 202 (397)
T 3f9t_A 192 ELSKIAKENNI 202 (397)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhCC
Confidence 88888888874
No 31
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=72.73 E-value=9.8 Score=31.22 Aligned_cols=79 Identities=24% Similarity=0.178 Sum_probs=52.3
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChH-----HH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELL-----FL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~-----~~ 205 (221)
+++|.++...+..+| ..+.......|++++..+ ....|+-+.++|.+.++.-+|+.++..|..++ .+
T Consensus 96 ~~gd~vl~~~~~~~~-----~~~~~~~~~~g~~~~~~~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 167 (393)
T 3kgw_A 96 EPGDSFLTGTNGIWG-----MRAAEIADRIGARVHQMI---KKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPL 167 (393)
T ss_dssp CTTCEEEEEESSHHH-----HHHHHHHHHTTCEEEEEE---CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred CCCCEEEEEeCCchh-----HHHHHHHHHcCCceEEEe---CCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccH
Confidence 378888887643211 123456667888776322 22345778999999998778998887775332 46
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 168 ~~i~~l~~~~~~ 179 (393)
T 3kgw_A 168 DGFGELCHRYQC 179 (393)
T ss_dssp TTHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 677888888774
No 32
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=72.41 E-value=5 Score=33.52 Aligned_cols=82 Identities=16% Similarity=0.084 Sum_probs=47.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC---hHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE---LLFLKE 207 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge---~~~~~~ 207 (221)
++||.++......++.......+ .+...++.++.. .....|.-+.++|.+.++.-+|+.++++|+. ...+.+
T Consensus 109 ~~gd~vl~~~~~~~~~~~~~~~~--~~~g~~~~~~~~---~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~ 183 (417)
T 3n0l_A 109 NPGDKILGMDLSHGGHLTHGAKV--SSSGKMYESCFY---GVELDGRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAK 183 (417)
T ss_dssp CTTCEEEEECC------------------CCSEEEEE---CCCTTSSCCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHH
T ss_pred CCCCEEEecccccccccchhhhh--hhhcceeeeEec---cCCCCCCcCHHHHHHHHHhcCCeEEEECCcccCccCCHHH
Confidence 37899888877554432211111 111234433311 1123567889999999987799999999843 335778
Q ss_pred HHHHHHhcCC
Q 045468 208 HELLGRSTGI 217 (221)
Q Consensus 208 ~~~~~~~~g~ 217 (221)
.++++++.|+
T Consensus 184 i~~l~~~~~~ 193 (417)
T 3n0l_A 184 FREIADEIGA 193 (417)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 8888888874
No 33
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=71.78 E-value=3.4 Score=34.26 Aligned_cols=77 Identities=12% Similarity=0.148 Sum_probs=50.1
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~ 208 (221)
.++|.||.+.+..+++. +.+...|++++..+.+. -.++-+.++|++.+.. +++.++|.| |....+.+.
T Consensus 73 ~~gd~Vi~~~~~~~~~~-------~~~~~~G~~~~~~~~~~--~~~~~d~~~l~~~i~~-~~~~v~~~~~~G~~~~~~~i 142 (367)
T 3nyt_A 73 GPGDEVITPGFTYVATA-------ETVALLGAKPVYVDIDP--RTYNLDPQLLEAAITP-RTKAIIPVSLYGQCADFDAI 142 (367)
T ss_dssp CTTCEEEEESSSCTHHH-------HHHHHTTCEEEEECBCT--TTCSBCGGGTGGGCCT-TEEEECCBCGGGCCCCHHHH
T ss_pred CCcCEEEECCCccHHHH-------HHHHHcCCEEEEEecCC--ccCCcCHHHHHHhcCc-CCcEEEeeCCccChhhHHHH
Confidence 48899988887555432 22456788776321110 1266778888776632 567888888 334477888
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 143 ~~la~~~~~ 151 (367)
T 3nyt_A 143 NAIASKYGI 151 (367)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 889998885
No 34
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=71.16 E-value=3 Score=33.10 Aligned_cols=28 Identities=21% Similarity=0.234 Sum_probs=25.3
Q ss_pred eecCCCHHHHHHHHHHcCCCEEEEcCCC
Q 045468 174 TSGHGYRGELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 174 ~SGHA~~~dL~~~i~~i~Pk~iiPVHge 201 (221)
-.||.+.++..++++.++|+.+||+|-.
T Consensus 210 ~~~H~~~~~a~~~~~~~~~~~lil~H~~ 237 (268)
T 1zkp_A 210 KAGHMNSTEVASIAKDANVKELLLTHLP 237 (268)
T ss_dssp GGTCCBHHHHHHHHHHTTCSEEEEESBC
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCC
Confidence 3569999999999999999999999954
No 35
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=70.57 E-value=2.9 Score=35.06 Aligned_cols=27 Identities=7% Similarity=0.231 Sum_probs=25.1
Q ss_pred ecCCCHHHHHHHHHHcCCCEEEEcCCC
Q 045468 175 SGHGYRGELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 175 SGHA~~~dL~~~i~~i~Pk~iiPVHge 201 (221)
++|.+.++..++++.++|+.+||+|..
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~ 283 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHD 283 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTT
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeec
Confidence 579999999999999999999999964
No 36
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=70.00 E-value=11 Score=31.12 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh-----HHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-----LFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-----~~~ 205 (221)
+++|.|++..+..+++. ..+.....|++++..+ ....|+.+.++|++.++.-+++.++..|..+ ..+
T Consensus 91 ~~gd~vl~~~~~~~~~~-----~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 162 (396)
T 2ch1_A 91 EEGDRVLIAVNGIWAER-----AVEMSERYGADVRTIE---GPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPL 162 (396)
T ss_dssp CTTCEEEEEESSHHHHH-----HHHHHHHTTCEEEEEE---CCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred CCCCeEEEEcCCcccHH-----HHHHHHHcCCceEEec---CCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCH
Confidence 37888888876444432 2234566788776322 1124678899999888765788888776432 236
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 163 ~~i~~l~~~~~~ 174 (396)
T 2ch1_A 163 EGVGQICHQHDC 174 (396)
T ss_dssp TTHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 677778887774
No 37
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=69.85 E-value=19 Score=28.39 Aligned_cols=49 Identities=12% Similarity=0.027 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEEEE
Q 045468 16 SESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFV 64 (221)
Q Consensus 16 sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~ 64 (221)
+-..+.+.+.+++.+++..+++......+.++..-+..|.+.|-.+.+.
T Consensus 7 ~~e~Ii~r~~e~I~~A~~el~lsi~~e~l~~l~~~L~~A~~rGV~V~li 55 (233)
T 2f5t_X 7 SFDEAIEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVTVSLY 55 (233)
T ss_dssp CHHHHHHHHHHHHHTCSSEEEEEECGGGHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHhhhEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 4567899999999999999999999999999999999999999866554
No 38
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=69.19 E-value=18 Score=29.65 Aligned_cols=77 Identities=10% Similarity=0.009 Sum_probs=46.8
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCc-eeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNE-GLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-------- 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~-~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-------- 202 (221)
++|.|+...+..+++. ..+...|++++..+.. .-.-....+.++|++.++. ++.++..|-.+
T Consensus 113 ~gd~vl~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~~~~~ 183 (391)
T 4dq6_A 113 ANDKIMIQEPVYSPFN-------SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGRVWTK 183 (391)
T ss_dssp TTCEEEECSSCCTHHH-------HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTBCCCH
T ss_pred CCCEEEEcCCCCHHHH-------HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCcCcCH
Confidence 7888887765444322 3345678887631110 0000112477888877766 77776666544
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 184 ~~l~~i~~~~~~~~~ 198 (391)
T 4dq6_A 184 DELKKLGDICLKHNV 198 (391)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 478889999998874
No 39
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=69.17 E-value=9.3 Score=31.61 Aligned_cols=77 Identities=9% Similarity=0.122 Sum_probs=47.7
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC--ChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG--ELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg--e~~~~~~~ 208 (221)
+++|.||.+....+++. +.+...|++++..+.+. -.|.-+.++|++.++. +++.++|.|- ....+.+.
T Consensus 76 ~~gd~Vi~~~~~~~~~~-------~~~~~~g~~~~~v~~~~--~~~~~d~~~l~~~i~~-~~~~v~~~n~tG~~~~l~~i 145 (388)
T 1b9h_A 76 GPGTEVIVPAFTFISSS-------QAAQRLGAVTVPVDVDA--ATYNLDPEAVAAAVTP-RTKVIMPVHMAGLMADMDAL 145 (388)
T ss_dssp CTTCEEEEESSSCTHHH-------HHHHHTTCEEEEECBCT--TTCCBCHHHHHHHCCT-TEEEECCBCGGGCCCCHHHH
T ss_pred CCcCEEEECCCccHHHH-------HHHHHcCCEEEEEecCC--CcCCCCHHHHHHhcCc-CceEEEEeCCccCcCCHHHH
Confidence 47888888877655543 23456788776211100 0245567777666532 4567888874 33467788
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 146 ~~la~~~~~ 154 (388)
T 1b9h_A 146 AKISADTGV 154 (388)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 888888875
No 40
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=68.70 E-value=20 Score=27.89 Aligned_cols=65 Identities=6% Similarity=-0.029 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH---HcCCCEEEEcCCChHHHHHHHHHHHhcCC
Q 045468 147 ESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK---LVKPQHFLPIHGELLFLKEHELLGRSTGI 217 (221)
Q Consensus 147 e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~---~i~Pk~iiPVHge~~~~~~~~~~~~~~g~ 217 (221)
+.....+...+.+.|+++. .+|++.-.+.+.+++.++ .+..++++ +|.....+...++.|++.|+
T Consensus 60 ~~~~~~~~~~l~~~gl~i~-----~~~~~~~~~~~~~~~~i~~A~~lGa~~v~-~~p~~~~l~~l~~~a~~~gv 127 (257)
T 3lmz_A 60 DEQIRAFHDKCAAHKVTGY-----AVGPIYMKSEEEIDRAFDYAKRVGVKLIV-GVPNYELLPYVDKKVKEYDF 127 (257)
T ss_dssp HHHHHHHHHHHHHTTCEEE-----EEEEEEECSHHHHHHHHHHHHHHTCSEEE-EEECGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCeEE-----EEeccccCCHHHHHHHHHHHHHhCCCEEE-ecCCHHHHHHHHHHHHHcCC
Confidence 4456678888999999886 455544466666666654 45777777 57666778888888888886
No 41
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=68.53 E-value=46 Score=26.98 Aligned_cols=80 Identities=14% Similarity=0.004 Sum_probs=50.5
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.+++.... +... .+.+.+...|++++..+.. ...|.-+.++|++.++.-+++.++..| |-...+
T Consensus 84 ~~gd~vlv~~~~---~~~~--~~~~~~~~~g~~~~~v~~~--~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l 156 (385)
T 2bkw_A 84 APNKNVLVVSTG---TFSD--RFADCLRSYGAQVDVVRPL--KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDL 156 (385)
T ss_dssp CSCCEEEEECSS---HHHH--HHHHHHHHTTCEEEEECCS--STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCH
T ss_pred CCCCeEEEEcCC---cchH--HHHHHHHHcCCceEEEecC--CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCH
Confidence 378887666432 1111 1134566789887632210 124667889999888765788888777 444457
Q ss_pred HHHHHHHHhc--CC
Q 045468 206 KEHELLGRST--GI 217 (221)
Q Consensus 206 ~~~~~~~~~~--g~ 217 (221)
.+.++++++. |+
T Consensus 157 ~~i~~~~~~~~~~~ 170 (385)
T 2bkw_A 157 KAISQAIKQTSPET 170 (385)
T ss_dssp HHHHHHHHHHCTTS
T ss_pred HHHHHHHHhhCCCC
Confidence 7888888887 64
No 42
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=67.40 E-value=3.7 Score=34.77 Aligned_cols=27 Identities=11% Similarity=0.185 Sum_probs=25.0
Q ss_pred ecCCCHHHHHHHHHHcCCCEEEEcCCC
Q 045468 175 SGHGYRGELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 175 SGHA~~~dL~~~i~~i~Pk~iiPVHge 201 (221)
++|.+.++..++++.++|+++||+|..
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~ 308 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHD 308 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTT
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeec
Confidence 579999999999999999999999954
No 43
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=65.74 E-value=3.9 Score=33.85 Aligned_cols=74 Identities=11% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee---ecCCCHHHHHHHHHHcCCCEEEEcC--CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT---SGHGYRGELEEVLKLVKPQHFLPIH--GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~---SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~ 205 (221)
+++|.|+.+....+++. +.+...|++++. +.. ++..+.++|++.++. +++.++|.| |....+
T Consensus 74 ~~gd~Vi~~~~~~~~~~-------~~~~~~g~~~~~-----~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n~~G~~~~l 140 (373)
T 3frk_A 74 GFGDEVIVPSNTFIATA-------LAVSYTGAKPIF-----VEPDIRTYNIDPSLIESAITE-KTKAIIAVHLYGQPADM 140 (373)
T ss_dssp CTTCEEEEETTSCTHHH-------HHHHHHSCEEEE-----ECEETTTTEECGGGTGGGCCT-TEEEEEEECCTTCCCCH
T ss_pred CCcCEEEECCCCcHHHH-------HHHHHcCCEEEE-----EeccccccCcCHHHHHHhcCC-CCeEEEEECCCcCcccH
Confidence 47899888877555532 224556887762 222 244467777665543 677888888 445567
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 141 ~~i~~l~~~~~~ 152 (373)
T 3frk_A 141 DEIKRIAKKYNL 152 (373)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 788888888874
No 44
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=65.52 E-value=40 Score=26.13 Aligned_cols=65 Identities=15% Similarity=0.085 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH---HcCCCEEEEcCCChHHHHHHHHHHHhcCC
Q 045468 147 ESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK---LVKPQHFLPIHGELLFLKEHELLGRSTGI 217 (221)
Q Consensus 147 e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~---~i~Pk~iiPVHge~~~~~~~~~~~~~~g~ 217 (221)
+.....+...+.+.|+++. .+|+....+.+++++.++ .+..++++- |.....+...++.|++.|+
T Consensus 62 ~~~~~~~~~~l~~~gl~i~-----~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~-~~~~~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 62 AQTQKEIKELAASKGIKIV-----GTGVYVAEKSSDWEKMFKFAKAMDLEFITC-EPALSDWDLVEKLSKQYNI 129 (262)
T ss_dssp HHHHHHHHHHHHHTTCEEE-----EEEEECCSSTTHHHHHHHHHHHTTCSEEEE-CCCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCeEE-----EEeccCCccHHHHHHHHHHHHHcCCCEEEe-cCCHHHHHHHHHHHHHhCC
Confidence 3344556666777777665 344444444444444443 335554443 3334455666667766665
No 45
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=65.10 E-value=10 Score=31.65 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=47.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~ 208 (221)
+++|.|+...+..+++. ..+...|++++..+.+. -.++.+.++|++.++. +++.++|.| |....+.+.
T Consensus 101 ~~gd~vl~~~~~~~~~~-------~~~~~~g~~~~~~~~~~--~~~~~d~~~l~~~i~~-~~~~v~~~n~tG~~~~l~~i 170 (399)
T 2oga_A 101 GPGDEVIVPSHTYIASW-------LAVSATGATPVPVEPHE--DHPTLDPLLVEKAITP-RTRALLPVHLYGHPADMDAL 170 (399)
T ss_dssp CTTCEEEEESSSCTHHH-------HHHHHTTCEEEEECBCS--SSSSBCHHHHHHHCCT-TEEEECCBCGGGCCCCHHHH
T ss_pred CCcCEEEECCCccHHHH-------HHHHHCCCEEEEEecCC--CCCCcCHHHHHHhcCC-CCeEEEEeCCcCCccCHHHH
Confidence 47888888876544432 23456788776322110 1356677777766643 567888766 334457788
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 171 ~~l~~~~~~ 179 (399)
T 2oga_A 171 RELADRHGL 179 (399)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 888888774
No 46
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=64.54 E-value=22 Score=28.83 Aligned_cols=78 Identities=6% Similarity=-0.066 Sum_probs=48.8
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc----CCCEEEEcCC-----Ch
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV----KPQHFLPIHG-----EL 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i----~Pk~iiPVHg-----e~ 202 (221)
++|.|+...+..+++... +...|++++..+. .....+.-+.++|++.++.. +++.++..|. ..
T Consensus 92 ~gd~vl~~~~~~~~~~~~-------~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~ 163 (371)
T 2e7j_A 92 KDAWVVMDENCHYSSYVA-------AERAGLNIALVPK-TDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNL 163 (371)
T ss_dssp TTCEEEEETTCCHHHHHH-------HHHTTCEEEEECC-CCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCC
T ss_pred CCCEEEEccCcchHHHHH-------HHHcCCeEEEeec-ccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCccc
Confidence 788888777644433221 4567887763220 01112566889999988764 5666776664 33
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
..+.+.++++++.|+
T Consensus 164 ~~~~~i~~~~~~~~~ 178 (371)
T 2e7j_A 164 PDVKKIAKVCSEYDV 178 (371)
T ss_dssp CCHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 357888888888875
No 47
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=64.53 E-value=5.5 Score=32.58 Aligned_cols=79 Identities=11% Similarity=-0.035 Sum_probs=47.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC-----ChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG-----ELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-----e~~~~ 205 (221)
+++|.||.+.+..|++... ...+...|++++..+ ..-.|.-+.++|++.++. +++.++..|. ....+
T Consensus 86 ~~gd~vi~~~~~~~~~~~~----~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~ 157 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINP----AKFLQKQGFEVEYIP---VGKYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPV 157 (382)
T ss_dssp GGCCEEEEETTCCHHHHHH----HHHHHHTTCEEEEEC---BCTTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCH
T ss_pred CCCCEEEECCCCcHHHHHH----HHHHHhcCCEEEEec---cCCCCCcCHHHHHHHhcc-CceEEEEECCCCCceeeCCH
Confidence 3789999887755554332 234566788876322 112345567777665532 4566766663 33357
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 158 ~~i~~l~~~~~~ 169 (382)
T 4hvk_A 158 EEISEVLAGKAA 169 (382)
T ss_dssp HHHHHHHSSSSE
T ss_pred HHHHHHHHHcCE
Confidence 788888887763
No 48
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=63.83 E-value=5.9 Score=32.99 Aligned_cols=78 Identities=14% Similarity=0.076 Sum_probs=47.0
Q ss_pred cCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHH
Q 045468 130 LTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKE 207 (221)
Q Consensus 130 ~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~ 207 (221)
++++|.||.+....+++.. -+...|++++..+.+. -.|.-+.++|++.++. +++.++.+| |....+.+
T Consensus 77 ~~~g~~Vi~~~~~~~~~~~-------~~~~~g~~~~~~~~~~--~~~~~d~~~l~~~i~~-~~~~v~~~~~~g~~~~~~~ 146 (390)
T 3b8x_A 77 LKKGDEIIVPAVSWSTTYY-------PLQQYGLRVKFVDIDI--NTLNIDIESLKEAVTD-STKAILTVNLLGNPNNFDE 146 (390)
T ss_dssp CCTTCEEEEESSSCHHHHH-------HHHHTTCEEEEECBCT--TTCSBCHHHHHHHCCT-TEEEEEEECGGGCCCCHHH
T ss_pred CCCcCEEEECCCCcHHHHH-------HHHHcCCEEEEEecCc--cccCcCHHHHHHHhCc-CCeEEEEECCccChhhHHH
Confidence 3578888877764443322 2335788776211100 0255567777666543 456777776 55567888
Q ss_pred HHHHHHhcCC
Q 045468 208 HELLGRSTGI 217 (221)
Q Consensus 208 ~~~~~~~~g~ 217 (221)
.++++++.|+
T Consensus 147 i~~l~~~~~~ 156 (390)
T 3b8x_A 147 INKIIGGRDI 156 (390)
T ss_dssp HHHHHTTSCC
T ss_pred HHHHHHHcCC
Confidence 8888888874
No 49
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=63.50 E-value=31 Score=28.33 Aligned_cols=76 Identities=16% Similarity=0.060 Sum_probs=45.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeec---CCCHHHHHHHHHHcCCCEEEEcCCChH-----
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSG---HGYRGELEEVLKLVKPQHFLPIHGELL----- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SG---HA~~~dL~~~i~~i~Pk~iiPVHge~~----- 203 (221)
++|.|+...+..+++. ..+...|++++..+ ....+ .-+.++|.+.++.-+|+.++-.+-.+|
T Consensus 110 ~gd~vl~~~p~y~~~~-------~~~~~~g~~~~~v~---~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~ 179 (390)
T 1d2f_A 110 TGEGVVIHTPAYDAFY-------KAIEGNQRTVMPVA---LEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVW 179 (390)
T ss_dssp TTCEEEEEESCCHHHH-------HHHHHTTCEEEEEE---CEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCC
T ss_pred CCCEEEEcCCCcHHHH-------HHHHHCCCEEEEee---cccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCc
Confidence 7888887665333322 33456788776211 11112 257788887776446676664453332
Q ss_pred ---HHHHHHHHHHhcCC
Q 045468 204 ---FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ---~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 180 ~~~~l~~l~~~~~~~~~ 196 (390)
T 1d2f_A 180 TCDELEIMADLCERHGV 196 (390)
T ss_dssp CTTHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 58888889998874
No 50
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=63.21 E-value=5.3 Score=31.62 Aligned_cols=29 Identities=17% Similarity=0.117 Sum_probs=25.6
Q ss_pred eecCCCHHHHHHHHHHcCCCEEEEcCCCh
Q 045468 174 TSGHGYRGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 174 ~SGHA~~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
..||.+.++..++++.++|+.+|++|=..
T Consensus 219 ~~~H~t~~~a~~~~~~~~~~~lvl~H~~~ 247 (280)
T 2e7y_A 219 YKNHAAIDEVMESVKAAGVKKVILYHIST 247 (280)
T ss_dssp --CCCBHHHHHHHHHHHTCCEEEEESCCG
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeecC
Confidence 36899999999999999999999999765
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=62.83 E-value=34 Score=27.94 Aligned_cols=80 Identities=15% Similarity=0.019 Sum_probs=48.2
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-------- 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-------- 202 (221)
+++|.|+...+..++ ....+...|++++..+...-.-...-+.++|.+.++.-+|+.++-.|-.+
T Consensus 107 ~~gd~vl~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~ 179 (391)
T 3dzz_A 107 SPGDQILVQEPVYNM-------FYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSE 179 (391)
T ss_dssp CTTCEEEECSSCCHH-------HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCH
T ss_pred CCCCeEEECCCCcHH-------HHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCH
Confidence 378888876653332 22345567888763221000011126788888887655677776555422
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 180 ~~l~~i~~~~~~~~~ 194 (391)
T 3dzz_A 180 EEVKRIAELCAKHQV 194 (391)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 578888999998885
No 52
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=62.61 E-value=23 Score=23.87 Aligned_cols=15 Identities=27% Similarity=0.295 Sum_probs=8.6
Q ss_pred CHHHHHHHHHHHHHh
Q 045468 16 SESVVKDALMRHVSA 30 (221)
Q Consensus 16 sE~~v~~~i~~~~~~ 30 (221)
+-+++.+.+.+++..
T Consensus 34 spqelkdsieelvkk 48 (134)
T 2l69_A 34 SPQELKDSIEELVKK 48 (134)
T ss_dssp SHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHH
Confidence 555666666665543
No 53
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=62.26 E-value=37 Score=27.66 Aligned_cols=74 Identities=9% Similarity=0.077 Sum_probs=45.7
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee---c-CCCHHHHHHHHHHcCCCEEEEcCCChH---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS---G-HGYRGELEEVLKLVKPQHFLPIHGELL--- 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S---G-HA~~~dL~~~i~~i~Pk~iiPVHge~~--- 203 (221)
+++|.|+...+..+++ .+.+...|++++ .+... | ..+.++|++.++. +++.++..+-.+|
T Consensus 103 ~~gd~Vl~~~~~~~~~-------~~~~~~~g~~~~-----~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~ 169 (375)
T 3op7_A 103 EPGDHVISLYPTYQQL-------YDIPKSLGAEVD-----LWQIEEENGWLPDLEKLRQLIRP-TTKMICINNANNPTGA 169 (375)
T ss_dssp CTTCEEEEEESSCTHH-------HHHHHHTTCEEE-----EEEEEGGGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCC
T ss_pred CCCCEEEEeCCCchhH-------HHHHHHcCCEEE-----EEeccccCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCC
Confidence 3789988877654442 233556788776 22222 1 1366666665542 6777776554333
Q ss_pred -----HHHHHHHHHHhcCC
Q 045468 204 -----FLKEHELLGRSTGI 217 (221)
Q Consensus 204 -----~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 170 ~~~~~~l~~i~~la~~~~~ 188 (375)
T 3op7_A 170 VMDRTYLEELVEIASEVGA 188 (375)
T ss_dssp CCCHHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 38888999998885
No 54
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=61.58 E-value=14 Score=30.55 Aligned_cols=77 Identities=19% Similarity=0.220 Sum_probs=47.5
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~ 208 (221)
+++|.|+...+..+++. ..+...|++++..+.+. -.++-+.++|++.++. +++.++++| |....+.+.
T Consensus 77 ~~gd~Vl~~~~~~~~~~-------~~~~~~g~~~~~v~~~~--~~~~~d~~~l~~~l~~-~~~~v~~~~~~G~~~~~~~i 146 (393)
T 1mdo_A 77 GEGDEVITPSMTWVSTL-------NMIVLLGANPVMVDVDR--DTLMVTPEHIEAAITP-QTKAIIPVHYAGAPADLDAI 146 (393)
T ss_dssp CTTCEEEEESSSCHHHH-------HHHHHTTCEEEEECBCT--TTCCBCHHHHHHHCCT-TEEEECCBCGGGCCCCHHHH
T ss_pred CCCCEEEeCCCccHhHH-------HHHHHCCCEEEEEeccC--CcCCCCHHHHHHhcCC-CceEEEEeCCCCCcCCHHHH
Confidence 47888887766443332 23456788876322110 1256777887776653 567777655 444567888
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 147 ~~l~~~~~~ 155 (393)
T 1mdo_A 147 YALGERYGI 155 (393)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 888888774
No 55
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=61.37 E-value=17 Score=30.25 Aligned_cols=73 Identities=11% Similarity=0.038 Sum_probs=45.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee----cCCCHHHHHHHHHHcCCCEEEEcCCChH----
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS----GHGYRGELEEVLKLVKPQHFLPIHGELL---- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S----GHA~~~dL~~~i~~i~Pk~iiPVHge~~---- 203 (221)
++|.|+...+..+++.. .+...|++++ .+... +..+.++|.+.++. +++.++-+|-.+|
T Consensus 127 ~gd~vl~~~p~y~~~~~-------~~~~~g~~~~-----~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~ 193 (416)
T 1bw0_A 127 AGDYALVPQPGFPHYET-------VCKAYGIGMH-----FYNCRPENDWEADLDEIRRLKDD-KTKLLIVTNPSNPCGSN 193 (416)
T ss_dssp TTCEEEEEESCCTHHHH-------HHHHTTCEEE-----EEEEEGGGTTEECHHHHHHHCCT-TEEEEEEESSCTTTCCC
T ss_pred CCCEEEEcCCCcHhHHH-------HHHHcCcEEE-----EeecCcccCCCCCHHHHHHHhcc-CCeEEEEeCCCCCCCcc
Confidence 78898888876555432 3456788776 22221 12355555554431 3456777776655
Q ss_pred ----HHHHHHHHHHhcCC
Q 045468 204 ----FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ----~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 194 ~~~~~l~~i~~~~~~~~~ 211 (416)
T 1bw0_A 194 FSRKHVEDIVRLAEELRL 211 (416)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCC
Confidence 48889999998874
No 56
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=61.22 E-value=51 Score=26.35 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=49.7
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc-CCCEEEEcCCCh-----HHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV-KPQHFLPIHGEL-----LFL 205 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i-~Pk~iiPVHge~-----~~~ 205 (221)
++|.+|+..... +-. .+.......|++++..+ ....|+-+.++|+..++.- +++.++.+|.++ ..+
T Consensus 79 ~gd~vi~~~~~~--~~~---~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l 150 (366)
T 1m32_A 79 PQDKVLIVSNGA--YGA---RMVEMAGLMGIAHHAYD---CGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPI 150 (366)
T ss_dssp TTCCEEEEESSH--HHH---HHHHHHHHHTCCEEEEE---CCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCH
T ss_pred CCCeEEEEeCCC--ccH---HHHHHHHHhCCceEEEe---CCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCH
Confidence 677776655321 111 12334455687765322 2235788999999998874 688888887653 357
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 151 ~~i~~l~~~~~~ 162 (366)
T 1m32_A 151 DEVGALAHRYGK 162 (366)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 788888888874
No 57
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=61.05 E-value=6.3 Score=31.82 Aligned_cols=30 Identities=20% Similarity=0.201 Sum_probs=26.9
Q ss_pred eecCCCHHHHHHHHHHcCCCEEEEcCCChH
Q 045468 174 TSGHGYRGELEEVLKLVKPQHFLPIHGELL 203 (221)
Q Consensus 174 ~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~ 203 (221)
-.+|.+.++..++++.++|+.+|++|=...
T Consensus 237 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~ 266 (293)
T 3md7_A 237 HPSHFSLGEALEWIEKLSPKRAILTHMHVP 266 (293)
T ss_dssp BTTBCCHHHHHHHHHHHCCSEEEEESBCTT
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCCCC
Confidence 378999999999999999999999997543
No 58
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=60.31 E-value=25 Score=25.57 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=38.6
Q ss_pred ccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 129 KLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
+++.+..++|.++...|.......+...+. ++.+. ..+.+.|..+.++++.|++.+.
T Consensus 105 ~l~gk~v~~f~t~g~~~~g~~~~~l~~~l~--~~~~~----~g~~~~g~~~~~~v~~W~~~~~ 161 (162)
T 3klb_A 105 DFAGKIVVPFATSGGSGIGNCEKNLHKAYP--DIVWK----DGKLLNGQITRDLVTEWFEKIR 161 (162)
T ss_dssp CCTTCEEEEEEECSSCCSHHHHHHHHHHCT--TSEEC----CCEECCSCCCHHHHHHHHHHTT
T ss_pred CCCCCEEEEEEEeCCCCccHHHHHHHHHcC--CCEee----cceEEeCCCCHHHHHHHHHHhC
Confidence 344455778888766665444444545553 66665 3677888899999999998764
No 59
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=60.30 E-value=9.1 Score=31.36 Aligned_cols=78 Identities=12% Similarity=-0.058 Sum_probs=46.7
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC-----ChHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG-----ELLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-----e~~~~~ 206 (221)
++|.|+.+....+++.. ....+...|++++..+. ...|.-+.++|++.++. +|+.++..|. ....+.
T Consensus 87 ~gd~Vl~~~~~~~~~~~----~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~ 158 (382)
T 4eb5_A 87 KGKHILVSAVEHMSVIN----PAKFLQKQGFEVEYIPV---GKYGEVDVSFIDQKLRD-DTILVSVQHANNEIGTIQPVE 158 (382)
T ss_dssp GCCEEEEETTCCHHHHH----HHHHHTTTTCEEEEECB---CTTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHH
T ss_pred CCCEEEECCCcchHHHH----HHHHHHhCCcEEEEecc---CCCCccCHHHHHHHhcC-CCeEEEEeccCCCccccCCHH
Confidence 78888887664443322 22334557887763221 12455677777766542 5667777664 334577
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 159 ~i~~l~~~~~~ 169 (382)
T 4eb5_A 159 EISEVLAGKAA 169 (382)
T ss_dssp HHHHHHTTSSE
T ss_pred HHHHHHHHCCC
Confidence 88888888774
No 60
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=59.98 E-value=39 Score=27.67 Aligned_cols=73 Identities=10% Similarity=-0.052 Sum_probs=44.0
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee---ecCCCHHHHHHHHHHcCCCEEEEcCCCh------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT---SGHGYRGELEEVLKLVKPQHFLPIHGEL------ 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~---SGHA~~~dL~~~i~~i~Pk~iiPVHge~------ 202 (221)
++|.|+...+..+++.. .+...|++++. +.. .+.-+.++|++.++ -+++.++-.|-.+
T Consensus 114 ~gd~vl~~~p~~~~~~~-------~~~~~g~~~~~-----v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~ 180 (386)
T 1u08_A 114 NGDEVICFDPSYDSYAP-------AIALSGGIVKR-----MALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVW 180 (386)
T ss_dssp TTCEEEEEESCCTTHHH-------HHHHTTCEEEE-----EECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCC
T ss_pred CCCEEEEeCCCchhHHH-------HHHHcCCEEEE-----eecCcccCcCCHHHHHHhhc-ccCEEEEEeCCCCCCCccC
Confidence 78888888876666433 34557887762 222 23456666665553 1445555444322
Q ss_pred --HHHHHHHHHHHhcCC
Q 045468 203 --LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 --~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 181 ~~~~l~~i~~~~~~~~~ 197 (386)
T 1u08_A 181 QQADFAALWQAIAGHEI 197 (386)
T ss_dssp CHHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHHcCc
Confidence 267888888888774
No 61
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=59.70 E-value=40 Score=27.75 Aligned_cols=81 Identities=12% Similarity=-0.107 Sum_probs=48.9
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCC--eEEecCCce-----e-eeecCCCHHHHHHHHHHcCCCEEEEcCCCh-
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGS--TIVMGRNEG-----L-HTSGHGYRGELEEVLKLVKPQHFLPIHGEL- 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~--~v~~~~~~~-----~-h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~- 202 (221)
++|.+|......+|+ .+.......|+ ++...+... . ..-+..+.++|++.++.-+|+.++.+|.+.
T Consensus 73 ~gd~vi~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~ 147 (379)
T 3ke3_A 73 IDEDCLIIRNGWFSY-----RWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETS 147 (379)
T ss_dssp TTCEEEEEECSHHHH-----HHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETT
T ss_pred CCCeEEEEeCCchhH-----HHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCC
Confidence 788888776533332 22233444553 443111000 0 011467899999998766899988887542
Q ss_pred ----HH---HHHHHHHHHhcCC
Q 045468 203 ----LF---LKEHELLGRSTGI 217 (221)
Q Consensus 203 ----~~---~~~~~~~~~~~g~ 217 (221)
.. +.+.++++++.|+
T Consensus 148 ~G~~~~~~~l~~i~~~~~~~~~ 169 (379)
T 3ke3_A 148 SGIILSEEYIKALSEAVHSVGG 169 (379)
T ss_dssp TTEECCHHHHHHHHHHHHHTTC
T ss_pred CceeCCHHHHHHHHHHHHHcCC
Confidence 23 8888899998885
No 62
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=59.68 E-value=18 Score=29.54 Aligned_cols=78 Identities=10% Similarity=0.052 Sum_probs=46.1
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.|++.....+++. .....+...|++++..+. ...|.-+.++|.+.++. +++.++..| |....+
T Consensus 87 ~~gd~vl~~~~~~~~~~----~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~ 158 (384)
T 1eg5_A 87 KRKRTIITTPIEHKAVL----ETMKYLSMKGFKVKYVPV---DSRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTIQPV 158 (384)
T ss_dssp TTCCEEEECTTSCHHHH----HHHHHHHHTTCEEEECCB---CTTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCH
T ss_pred CCCCEEEECCCCchHHH----HHHHHHHhcCCEEEEEcc---CCCCccCHHHHHHHhCC-CCeEEEEECCCCCcccccCH
Confidence 37888887765433322 222344567888763221 12345566666665542 566777666 444457
Q ss_pred HHHHHHHHhcC
Q 045468 206 KEHELLGRSTG 216 (221)
Q Consensus 206 ~~~~~~~~~~g 216 (221)
.+.++++++.|
T Consensus 159 ~~i~~l~~~~~ 169 (384)
T 1eg5_A 159 EDVTRIVKKKN 169 (384)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 78888888877
No 63
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=59.68 E-value=42 Score=27.23 Aligned_cols=79 Identities=8% Similarity=-0.047 Sum_probs=46.5
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-------- 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-------- 202 (221)
+++|.|+...+ ++-.. .+.+...|++++..+...-+-....+.++|.+.+ .-+++.++-.|-.+
T Consensus 104 ~~gd~vl~~~~---~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i~~p~nptG~~~~~ 175 (383)
T 3kax_A 104 KENESVLVQPP---IYPPF----FEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLLCSPHNPIGRVWKK 175 (383)
T ss_dssp CTTCEEEECSS---CCHHH----HHHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEEESSBTTTTBCCCH
T ss_pred CCCCEEEEcCC---CcHHH----HHHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEEeCCCCCCCcCcCH
Confidence 37888886664 33322 2345567888773211100001125788888877 34677776555443
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 176 ~~l~~l~~~~~~~~~ 190 (383)
T 3kax_A 176 EELTKLGSLCTKYNV 190 (383)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 368888888888774
No 64
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=59.48 E-value=27 Score=28.74 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=44.8
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee--c--CCCHHHHHHHHHHcCCCEEEEcCCChH---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS--G--HGYRGELEEVLKLVKPQHFLPIHGELL--- 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S--G--HA~~~dL~~~i~~i~Pk~iiPVHge~~--- 203 (221)
+++|.|+...+..+++ ...+...|++++. +... | .-+.++|.+. +++.++-.|-.+|
T Consensus 113 ~~gd~vl~~~p~~~~~-------~~~~~~~g~~~~~-----v~~~~~~~~~~d~~~l~~~----~~~~v~i~~p~nptG~ 176 (391)
T 3h14_A 113 DSGDRVGIGAPGYPSY-------RQILRALGLVPVD-----LPTAPENRLQPVPADFAGL----DLAGLMVASPANPTGT 176 (391)
T ss_dssp CTTCEEEEEESCCHHH-------HHHHHHTTCEEEE-----EECCGGGTTSCCHHHHTTS----CCSEEEEESSCTTTCC
T ss_pred CCCCEEEEcCCCCccH-------HHHHHHcCCEEEE-----eecCcccCCCCCHHHHHhc----CCeEEEECCCCCCCCc
Confidence 3788888776543332 2445567888762 2221 1 2366666555 8888776665444
Q ss_pred -----HHHHHHHHHHhcCC
Q 045468 204 -----FLKEHELLGRSTGI 217 (221)
Q Consensus 204 -----~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 177 ~~~~~~l~~l~~~~~~~~~ 195 (391)
T 3h14_A 177 MLDHAAMGALIEAAQAQGA 195 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHcCC
Confidence 58888999998874
No 65
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=59.01 E-value=42 Score=27.60 Aligned_cols=72 Identities=13% Similarity=0.043 Sum_probs=46.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc---CCCEEEEcCCC-----h
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV---KPQHFLPIHGE-----L 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i---~Pk~iiPVHge-----~ 202 (221)
+++|.|++..+..+++ ...+...|++++ .+. +-+.++|.+.++.. +++.++..|-. .
T Consensus 125 ~~gd~V~~~~p~~~~~-------~~~~~~~g~~~~-----~v~---~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~ 189 (398)
T 3a2b_A 125 GRNDYILLDERDHASI-------IDGSRLSFSKVI-----KYG---HNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDI 189 (398)
T ss_dssp CTTCEEEEETTCCHHH-------HHHHHHSSSEEE-----EEC---TTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCB
T ss_pred CCCCEEEECCccCHHH-------HHHHHHcCCceE-----EeC---CCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCc
Confidence 3788888776533322 233455788776 232 25788999888876 56766654433 3
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
..+.+.++++++.|+
T Consensus 190 ~~~~~l~~~~~~~~~ 204 (398)
T 3a2b_A 190 VNLPELTSIANEFDA 204 (398)
T ss_dssp CCHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHcCc
Confidence 357888888888774
No 66
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=58.01 E-value=7 Score=31.45 Aligned_cols=64 Identities=9% Similarity=0.119 Sum_probs=41.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEe-cCC--ce----eeeecCCCHHHHHHHHHHcCCCEEEEcCCCh
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVM-GRN--EG----LHTSGHGYRGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~-~~~--~~----~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
++..++|++-..+..+ +..++. ++++.. +.. .. ....||.+.++..++++.++|+.+|++|=..
T Consensus 204 ~g~~i~~sgDt~~~~~-----~~~~~~--~~D~li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~ 274 (306)
T 2cbn_A 204 PGKALAIFGDTGPCDA-----ALDLAK--GVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSS 274 (306)
T ss_dssp CCCEEEECCSCBSCST-----HHHHHT--TCSEEEEECCBCGGGHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCT
T ss_pred CCCEEEEeCCCCCHHH-----HHHHhc--CCCEEEEECcCChhhHhHHhhcCCCCHHHHHHHHHHcCCcEEEEEeecC
Confidence 3557888886544321 223333 454441 110 00 1257899999999999999999999999764
No 67
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=57.61 E-value=39 Score=28.59 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=45.1
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEE--cC---CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLP--IH---GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiP--VH---ge~~~~ 205 (221)
++||.||.+.+..+++ ...+...+.+.|++++ .+... +.++|+..++. +++.++- +| |...++
T Consensus 118 ~~Gd~Vi~~~~~y~~~---~~~~~~~~~~~g~~~~-----~v~~~---d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l 185 (414)
T 3ndn_A 118 GAGDRLVAARSLFGSC---FVVCSEILPRWGVQTV-----FVDGD---DLSQWERALSV-PTQAVFFETPSNPMQSLVDI 185 (414)
T ss_dssp CTTCEEEEESCCCHHH---HHHHHTHHHHTTCEEE-----EECTT---CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCH
T ss_pred CCCCEEEEcCCccchH---HHHHHHHHHHcCcEEE-----EeCCC---CHHHHHHhcCC-CCeEEEEECCCCCCCccccH
Confidence 4889988877643343 2233344667898876 22221 55555554432 4566662 23 455678
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 186 ~~i~~la~~~g~ 197 (414)
T 3ndn_A 186 AAVTELAHAAGA 197 (414)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 889999999885
No 68
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=57.41 E-value=8.2 Score=31.62 Aligned_cols=79 Identities=16% Similarity=0.022 Sum_probs=51.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC-----hHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE-----LLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge-----~~~~ 205 (221)
+++|.++......++. .+.......|++++..+ ....|+.+.++|++.+..-+++.++..|.. ...+
T Consensus 75 ~~gd~vi~~~~~~~~~-----~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 146 (384)
T 3zrp_A 75 KPNDKILVVSNGVFGD-----RWEQIFKRYPVNVKVLR---PSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPV 146 (384)
T ss_dssp CTTCEEEEECSSHHHH-----HHHHHHTTSSCEEEEEC---CSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCH
T ss_pred CCCCEEEEecCCcchH-----HHHHHHHHcCCcEEEec---CCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcH
Confidence 4788888876532221 22334456788776322 223567899999999988778888777643 2357
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 147 ~~i~~l~~~~~~ 158 (384)
T 3zrp_A 147 KDVINKIRKYVE 158 (384)
T ss_dssp HHHHHHHGGGEE
T ss_pred HHHHHHHHhcCC
Confidence 778888888763
No 69
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=57.24 E-value=35 Score=27.38 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=45.9
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHH-cCCeEEecCCceeeeecCCCHHHHHHHHH---HcCCCEEEEcCCChHHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISE-IGSTIVMGRNEGLHTSGHGYRGELEEVLK---LVKPQHFLPIHGELLFLKE 207 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~-~g~~v~~~~~~~~h~SGHA~~~dL~~~i~---~i~Pk~iiPVHge~~~~~~ 207 (221)
+++.+|+++.--+|-..- .+...+ .|-+++ .-...+|..+ |+.+.|.+.++ .++|++++|.|=-... +
T Consensus 171 ~~GlvvitGCsH~GI~Ni----v~~a~~~~g~~i~-~viGGfHL~~-~~~~~l~~tl~~l~~~~~~~i~~~HCTg~~--a 242 (267)
T 3h3e_A 171 KEGLVVITGCSHRGIDNI----LLDIAETFNERIK-MVVGGFHLLK-SSDDEIEKIVKAFNELGVETVVPCHCTGER--A 242 (267)
T ss_dssp TTEEEEEESCCTTCHHHH----HHHHHTTCSSCEE-EEEEECCCTT-SCHHHHHHHHHHHHHTTCCEEEEETTSCHH--H
T ss_pred CCcEEEEeCCCCcCHHHH----HHHHHHHhCCCce-EEEeccccCC-CCHHHHHHHHHHHHhcCCCEEEEECCCCHH--H
Confidence 467889999988884321 222222 342222 1124788755 67777766554 4589999999988654 4
Q ss_pred HHHHHHhc
Q 045468 208 HELLGRST 215 (221)
Q Consensus 208 ~~~~~~~~ 215 (221)
.+.+.++.
T Consensus 243 ~~~L~~~l 250 (267)
T 3h3e_A 243 VDIFKREF 250 (267)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHC
Confidence 44455544
No 70
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=56.58 E-value=24 Score=29.56 Aligned_cols=75 Identities=12% Similarity=-0.001 Sum_probs=43.6
Q ss_pred CCCC--EEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecC---CCHHHHHHHHHHcCCCEEEEcCCChH--
Q 045468 131 TNED--VILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGH---GYRGELEEVLKLVKPQHFLPIHGELL-- 203 (221)
Q Consensus 131 ~~~~--~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGH---A~~~dL~~~i~~i~Pk~iiPVHge~~-- 203 (221)
+++| .|+...+..+++ ...+...|++++ .+....+ .+.++|.+.++.-+++.++-.|-.+|
T Consensus 129 ~~gd~~~Vl~~~p~~~~~-------~~~~~~~g~~~~-----~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG 196 (437)
T 3g0t_A 129 HKNREYGTLFIDPGFNLN-------KLQCRILGQKFE-----SFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTW 196 (437)
T ss_dssp CTTCSCCEEEEESCCHHH-------HHHHHHHTCCCE-----EEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTC
T ss_pred CCCCccEEEEeCCCcHhH-------HHHHHHcCCEEE-----EEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCC
Confidence 3788 787776533332 233445677665 2322222 35566666654446777765444332
Q ss_pred ------HHHHHHHHHHhcCC
Q 045468 204 ------FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ------~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 197 ~~~~~~~l~~i~~~a~~~~~ 216 (437)
T 3g0t_A 197 QCMTDEELRIIGELATKHDV 216 (437)
T ss_dssp CCCCHHHHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHHHHHCCc
Confidence 68888999998884
No 71
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=56.42 E-value=34 Score=28.21 Aligned_cols=74 Identities=9% Similarity=0.055 Sum_probs=43.9
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee---c-CCCHHHHHHHHHHcCCCEEEEcCC----C-
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS---G-HGYRGELEEVLKLVKPQHFLPIHG----E- 201 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S---G-HA~~~dL~~~i~~i~Pk~iiPVHg----e- 201 (221)
++||.|+...+..+++. +.+...|++++. +... | .-+.++|.+.+.. +++.++..|- .
T Consensus 113 ~~gd~Vlv~~p~y~~~~-------~~~~~~g~~~~~-----v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~ 179 (385)
T 1b5p_A 113 DPGDEVIVLSPYWVSYP-------EMVRFAGGVVVE-----VETLPEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGA 179 (385)
T ss_dssp CTTCEEEEEESCCTHHH-------HHHHHTTCEEEE-----EECCGGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCC
T ss_pred CCCCEEEEcCCCchhHH-------HHHHHcCCEEEE-----eecCcccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCC
Confidence 37899888887554332 334567888762 2221 1 3455666554432 3556666562 2
Q ss_pred ---hHHHHHHHHHHHhcCC
Q 045468 202 ---LLFLKEHELLGRSTGI 217 (221)
Q Consensus 202 ---~~~~~~~~~~~~~~g~ 217 (221)
..++.+.++++++.|+
T Consensus 180 ~~~~~~l~~i~~~~~~~~~ 198 (385)
T 1b5p_A 180 VYPKEVLEALARLAVEHDF 198 (385)
T ss_dssp CCCHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHcCC
Confidence 2468888899988874
No 72
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=56.35 E-value=7.7 Score=31.51 Aligned_cols=64 Identities=9% Similarity=0.115 Sum_probs=41.1
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEe-cC---Cce---eeeecCCCHHHHHHHHHHcCCCEEEEcCCCh
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVM-GR---NEG---LHTSGHGYRGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~-~~---~~~---~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
++..++|++-..+.. .+.+.+. ++++.. +. +.. ....||.+.++..++++.++|+.+|++|=..
T Consensus 202 ~g~~i~~sgDt~~~~-----~~~~~~~--~~D~li~E~t~~~~~~~~a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~ 272 (320)
T 1y44_A 202 KGRSVVFSGDTRVSD-----KLKELAR--DCDVMVHEATFAKEDRKLAYDYYHSTTEQAAVTAKEARAKQLILTHISA 272 (320)
T ss_dssp CCCEEEECCSCBCCH-----HHHHHTT--TCSEEEEECCBCTTCHHHHHHTTCCBHHHHHHHHHHHTCSEEEEECBCT
T ss_pred CCCEEEEeCCCCCHH-----HHHHHhC--CCCEEEEeccCCcchHhHHhhcCCCCHHHHHHHHHHcCCCEEEEEeEcC
Confidence 455788887653322 2333333 455541 11 000 1247899999999999999999999999654
No 73
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=56.30 E-value=49 Score=27.37 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=48.1
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.|++..+. +-. ..+.+...|++++ . -.|.+.++|.+.+..-+++.++.-+ |....+
T Consensus 141 ~~gd~Vl~~~~~---~~~----~~~~~~~~g~~~~-----~---~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l 205 (409)
T 3kki_A 141 QPNTNVYIDFFA---HMS----LWEGARYANAQAH-----P---FMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPL 205 (409)
T ss_dssp CTTCEEEEETTS---CHH----HHHHHHHTTCEEE-----E---ECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCH
T ss_pred CCCCEEEECCCc---CHH----HHHHHHHcCCeEE-----E---ecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCH
Confidence 378888876543 322 2234555688776 2 2357899999999887788666544 334458
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 206 ~~l~~la~~~~~ 217 (409)
T 3kki_A 206 AELVNISKEFGC 217 (409)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 888899998874
No 74
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=56.29 E-value=21 Score=29.96 Aligned_cols=75 Identities=8% Similarity=-0.029 Sum_probs=45.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee----ecCCCHHHHHHHHHHcCCC-EEEEc---CC--
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT----SGHGYRGELEEVLKLVKPQ-HFLPI---HG-- 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~----SGHA~~~dL~~~i~~i~Pk-~iiPV---Hg-- 200 (221)
+++|.|+...+.++++ .+.+...|++++ .+.. .+.-+.++|.+.++...|+ .++-+ |.
T Consensus 141 ~~gd~Vlv~~p~~~~~-------~~~~~~~g~~~~-----~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPt 208 (420)
T 4f4e_A 141 NPKAKVAISDPSWENH-------RALFDMAGFEVV-----AYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPT 208 (420)
T ss_dssp CTTCCEEEEESCCHHH-------HHHHHHTTCCEE-----EEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred CCCCEEEEeCCCcHhH-------HHHHHHcCCeEE-----EeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 3788888877644433 234556788776 3332 2344677777777655565 33322 21
Q ss_pred ----ChHHHHHHHHHHHhcCC
Q 045468 201 ----ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 201 ----e~~~~~~~~~~~~~~g~ 217 (221)
...++.+.++++++.|+
T Consensus 209 G~~~~~~~l~~i~~~~~~~~~ 229 (420)
T 4f4e_A 209 GVDLNDAQWAQVVEVVKARRL 229 (420)
T ss_dssp CCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHCCc
Confidence 22568888899988874
No 75
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=55.15 E-value=7 Score=32.47 Aligned_cols=77 Identities=14% Similarity=0.235 Sum_probs=47.8
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~ 208 (221)
+++|.|+...+..+++.. .+...|++++..+.+. ..+..+.++|.+.++. +++.++|.| |....+.+.
T Consensus 94 ~~gd~vl~~~~~~~~~~~-------~~~~~g~~~~~~~~~~--~~~~~d~~~l~~~~~~-~~~~v~~~n~tG~~~~~~~i 163 (391)
T 3dr4_A 94 GPGDEVIVPSLTYIASAN-------SVTYCGATPVLVDNDP--RTFNLDAAKLEALITP-RTKAIMPVHLYGQICDMDPI 163 (391)
T ss_dssp CTTCEEEEESSSCTHHHH-------HHHHTTCEEEEECBCT--TTCSBCGGGSGGGCCT-TEEEECCBCGGGCCCCHHHH
T ss_pred CCcCEEEECCCchHHHHH-------HHHHCCCEEEEEecCc--cccCcCHHHHHHhcCC-CceEEEEECCCCChhhHHHH
Confidence 478898888776555432 2345688776211100 1244566766665432 567888887 344567888
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 164 ~~l~~~~~~ 172 (391)
T 3dr4_A 164 LEVARRHNL 172 (391)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 888988874
No 76
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=54.98 E-value=33 Score=28.42 Aligned_cols=80 Identities=14% Similarity=0.027 Sum_probs=43.8
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee---ecCCCHHHHHHHHHHcCCCEEEEcC---CChHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT---SGHGYRGELEEVLKLVKPQHFLPIH---GELLF 204 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~---SGHA~~~dL~~~i~~i~Pk~iiPVH---ge~~~ 204 (221)
+++|.|+...+..++.-...... .+...++..+ .+.. .++.+.++|...+..-+|+.++..+ |....
T Consensus 116 ~~gd~Vi~~~~~~~~~~~~~~~~--~~~g~~~~~~-----~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~ 188 (425)
T 3ecd_A 116 KPGDTVLGMSLDAGGHLTHGAKP--ALSGKWFNAL-----QYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYPRKLD 188 (425)
T ss_dssp CTTCEEEEECC--------------------CEEE-----EECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCCSCCC
T ss_pred CCCCEEEEcccccccceecchhh--hhcccceeee-----ecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCCCcCC
Confidence 37899888876544411111010 0122233433 1222 2678999999999877899777554 44446
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 189 l~~i~~l~~~~~~ 201 (425)
T 3ecd_A 189 FARFRAIADSVGA 201 (425)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 7788888888875
No 77
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=54.74 E-value=19 Score=29.93 Aligned_cols=78 Identities=15% Similarity=0.093 Sum_probs=46.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~~ 206 (221)
++|.|+......+++... ...+...|++++..+. ...|.-+.++|.+.+.. +|+.++..| |-...+.
T Consensus 112 ~gd~Vl~~~~~~~~~~~~----~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~ 183 (423)
T 3lvm_A 112 KGKHIITSKTEHKAVLDT----CRQLEREGFEVTYLAP---QRNGIIDLKELEAAMRD-DTILVSIMHVNNEIGVVQDIA 183 (423)
T ss_dssp TCCEEEEETTSCHHHHHH----HHHHHHTTCEEEEECC---CTTSCCCHHHHHHHCCT-TEEEEECCSBCTTTCBBCCHH
T ss_pred CCCEEEECCccchHHHHH----HHHHHHcCCEEEEecc---CCCCccCHHHHHHhcCC-CcEEEEEeCCCCCCccccCHH
Confidence 688888877654443322 2233567887763221 12455566777665543 556666655 4444578
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 184 ~i~~l~~~~~~ 194 (423)
T 3lvm_A 184 AIGEMCRARGI 194 (423)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 88888888874
No 78
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=54.49 E-value=24 Score=28.97 Aligned_cols=79 Identities=19% Similarity=0.148 Sum_probs=49.7
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC-----hHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE-----LLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge-----~~~~ 205 (221)
+++|.|+...+..++ . .+.+.+...|++++..+ ....|+-+.++|.+.++.-+++.++-.|.. ...+
T Consensus 107 ~~gd~Vl~~~~~~~~---~--~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l 178 (393)
T 1vjo_A 107 EPGDVVLIGVAGYFG---N--RLVDMAGRYGADVRTIS---KPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPL 178 (393)
T ss_dssp CTTCEEEEEESSHHH---H--HHHHHHHHTTCEEEEEE---CCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred CCCCEEEEEcCChhH---H--HHHHHHHHcCCceEEEe---cCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccH
Confidence 378888887753333 1 23455666788776322 112467889999998876578877665532 2245
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 179 ~~i~~l~~~~~~ 190 (393)
T 1vjo_A 179 EGVGELCREFGT 190 (393)
T ss_dssp TTHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 677777777764
No 79
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=54.37 E-value=35 Score=28.68 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=46.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc---CCCEEEEcC-----CChH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV---KPQHFLPIH-----GELL 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i---~Pk~iiPVH-----ge~~ 203 (221)
++|.|++.... +-. +.+.+...|.+++ .+ .|-+.++|++.++.. +++.++-.+ |...
T Consensus 147 ~gd~vl~~~~~---h~~----~~~~~~~~g~~~~-----~~---~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~ 211 (427)
T 2w8t_A 147 KGEYVILDADS---HAS----IYDGCQQGNAEIV-----RF---RHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIA 211 (427)
T ss_dssp TTCEEEEETTC---CHH----HHHHHHHSCSEEE-----EE---CTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEEC
T ss_pred CCCEEEECCcc---cHH----HHHHHHHcCCeeE-----Ee---CCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence 78887776542 222 2234455688775 22 378999999999876 566665444 3334
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
.+.+.++++++.|+
T Consensus 212 ~l~~l~~l~~~~g~ 225 (427)
T 2w8t_A 212 PLKEMVAVAKKHGA 225 (427)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCC
Confidence 58888889998874
No 80
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=54.34 E-value=50 Score=26.95 Aligned_cols=78 Identities=13% Similarity=-0.027 Sum_probs=44.2
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------H
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL--------L 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~--------~ 203 (221)
++|.|+......+++.. .+...|++++..+.......+.-+.++|++.++ -+++.++-.|..+ .
T Consensus 101 ~gd~Vl~~~~~~~~~~~-------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~ 172 (381)
T 1v2d_A 101 PGDEVVVLEPFFDVYLP-------DAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGER 172 (381)
T ss_dssp TTCEEEEEESCCTTHHH-------HHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHH
T ss_pred CCCEEEEcCCCchhHHH-------HHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-cCCEEEEECCCCCCCCCccCHH
Confidence 78888888876666432 345678877621110000124456666665442 1345555434222 3
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 173 ~l~~i~~~~~~~~~ 186 (381)
T 1v2d_A 173 ELEAIARLARAHDL 186 (381)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 58888889988874
No 81
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=54.23 E-value=59 Score=27.04 Aligned_cols=78 Identities=12% Similarity=-0.013 Sum_probs=44.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceee-------eecCCCHHHHHHHHHHcCCCEEEEcCCChH-
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLH-------TSGHGYRGELEEVLKLVKPQHFLPIHGELL- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h-------~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~- 203 (221)
++|.|+...+..+++.. .+...|++++..+...-. ..+..+.++|++.++ -+++.++-.|-.+|
T Consensus 124 ~gd~Vl~~~p~y~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~npt 195 (429)
T 1yiz_A 124 EGDEVIIIEPFFDCYEP-------MVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPL 195 (429)
T ss_dssp TTCEEEEEESCCTTHHH-------HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred CCCEEEEcCCCchhHHH-------HHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCC
Confidence 78888888876666433 234568877621110000 023355666665543 14555664454333
Q ss_pred -------HHHHHHHHHHhcCC
Q 045468 204 -------FLKEHELLGRSTGI 217 (221)
Q Consensus 204 -------~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 196 G~~~~~~~l~~i~~~~~~~~~ 216 (429)
T 1yiz_A 196 GKVMDRAELEVVANLCKKWNV 216 (429)
T ss_dssp CCCCCHHHHHHHHHHHHHHTC
T ss_pred CccCCHHHHHHHHHHHHHcCc
Confidence 68888999988874
No 82
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=52.78 E-value=9.3 Score=31.35 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=48.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~ 208 (221)
+++|.++...+..+++. ..+...|++++..+ ....+..+.++|.+.++. +++.++|.| |....+.+.
T Consensus 76 ~~gd~v~~~~~~~~~~~-------~~~~~~g~~~~~~~---~~~~~~~d~~~l~~~~~~-~~~~v~~~n~~G~~~~~~~i 144 (374)
T 3uwc_A 76 GAGDEVITCANTFIASV-------GAIVQAGATPVLVD---SENGYVIDPEKIEAAITD-KTKAIMPVHYTGNIADMPAL 144 (374)
T ss_dssp CTTCEEEEESSSCHHHH-------HHHHHTTCEEEEEC---BCTTSSBCGGGTGGGCCT-TEEEECCBCGGGCCCCHHHH
T ss_pred CCCCEEEECCCccHHHH-------HHHHHcCCEEEEEe---cCCCCCcCHHHHHHhCCC-CceEEEEeCCcCCcCCHHHH
Confidence 47889888776444332 33566788876211 112344467777665543 567888877 344467888
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 145 ~~~~~~~~~ 153 (374)
T 3uwc_A 145 AKIAKKHNL 153 (374)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 888998874
No 83
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=52.30 E-value=50 Score=27.08 Aligned_cols=77 Identities=13% Similarity=-0.058 Sum_probs=45.7
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeec--CCCHHHHHHHHHHcCCCEEEEcCCCh-------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSG--HGYRGELEEVLKLVKPQHFLPIHGEL------- 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SG--HA~~~dL~~~i~~i~Pk~iiPVHge~------- 202 (221)
++|.|+...+..+++. ..+...|++++..+... ..| ..+.++|++.++.-+|+.++-.|-.+
T Consensus 112 ~gd~vl~~~p~~~~~~-------~~~~~~g~~~~~~~~~~--~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (399)
T 1c7n_A 112 PGDGVIIITPVYYPFF-------MAIKNQERKIIECELLE--KDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK 182 (399)
T ss_dssp TTCEEEECSSCCTHHH-------HHHHTTTCEEEECCCEE--ETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred CCCEEEEcCCCcHhHH-------HHHHHcCCEEEeccccc--CCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcC
Confidence 7888877665444432 23445688776321100 012 26778888777644567666444333
Q ss_pred -HHHHHHHHHHHhcCC
Q 045468 203 -LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 -~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 183 ~~~l~~i~~~~~~~~~ 198 (399)
T 1c7n_A 183 KDELQKIKDIVLKSDL 198 (399)
T ss_dssp HHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 258888899998874
No 84
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=51.58 E-value=18 Score=30.46 Aligned_cols=73 Identities=10% Similarity=-0.040 Sum_probs=43.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee----cCCCHHHHHHHHHHcCCCEEEEcCCChH----
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS----GHGYRGELEEVLKLVKPQHFLPIHGELL---- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S----GHA~~~dL~~~i~~i~Pk~iiPVHge~~---- 203 (221)
++|.|+...+..+++. ..+...|++++ .+... +.-+.++|.+.++. +++.++-.|..+|
T Consensus 141 ~gd~vl~~~p~~~~~~-------~~~~~~g~~~~-----~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~~ 207 (427)
T 3dyd_A 141 PGQNILVPRPGFSLYK-------TLAESMGIEVK-----LYNLLPEKSWEIDLKQLEYLIDE-KTACLIVNNPSNPCGSV 207 (427)
T ss_dssp TTCEEEEEESCCTHHH-------HHHHHTTCEEE-----EEEEEGGGTTEECHHHHHSSCCT-TEEEEEEESSCTTTCCC
T ss_pred CCCEEEEcCCCchhHH-------HHHHHcCCEEE-----EEecccccCCCCCHHHHHHHhcc-CCCEEEEECCCCCCCCC
Confidence 7889888876555432 33556788776 22221 12244444443322 3566776666444
Q ss_pred ----HHHHHHHHHHhcCC
Q 045468 204 ----FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ----~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 208 ~~~~~l~~i~~~~~~~~~ 225 (427)
T 3dyd_A 208 FSKRHLQKILAVAARQCV 225 (427)
T ss_dssp CCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHCCC
Confidence 48899999999885
No 85
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=50.76 E-value=1e+02 Score=26.42 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=52.8
Q ss_pred ccCCCCEEEEEecC--CC-CcHHHHHHHHHHHHHc-CCeEEecCCceeeeecCCCHH--HHHHHHHHcCCCEEEEcCC--
Q 045468 129 KLTNEDVILYSAKV--IP-GNESRVMKMLNRISEI-GSTIVMGRNEGLHTSGHGYRG--ELEEVLKLVKPQHFLPIHG-- 200 (221)
Q Consensus 129 ~~~~~~~vI~s~~~--~p-g~e~~~~~~~~~l~~~-g~~v~~~~~~~~h~SGHA~~~--dL~~~i~~i~Pk~iiPVHg-- 200 (221)
+++.||+|..+-.. .| ..+-...++-+||.+. |.++. .-++||+..++ || .+..+ -||=
T Consensus 314 ~~~~gd~v~~~e~c~h~~~~~dig~vk~p~~~~~~~~~~~~-----~~~~~g~~~p~~~~~-------~~~~l-~i~cg~ 380 (423)
T 3qq5_A 314 ELEDGDTVVIMEGCTHRPLTEDIGRVKIPRWLVNHTGAQLN-----FKVIAGKDFPDLEEI-------ENAKL-IIHCGG 380 (423)
T ss_dssp TCCTTCEEEEECCSCCCCSSCCTTTTHHHHHHHHHSCSCCE-----EEEECSSSCCCHHHH-------SSCSE-EEECTT
T ss_pred hCCCCCEEEEeccCCCCCccccceechhhHHHHHHhCCCcE-----EEEecCCCCCCccCc-------ccCcE-EEECcc
Confidence 46789999877754 22 1233455788999885 33332 46789999998 77 33333 3554
Q ss_pred ---ChHHHHHHHHHHHhcCCC
Q 045468 201 ---ELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 201 ---e~~~~~~~~~~~~~~g~~ 218 (221)
..+++....+.|++.|++
T Consensus 381 cm~~~~~~~~r~~~~~~~~~p 401 (423)
T 3qq5_A 381 CILNRSAMMRRVRMAKRLGIP 401 (423)
T ss_dssp TCCCHHHHHHHHHHHHHTTCC
T ss_pred hhcCHHHHHHHHHHHHHcCCC
Confidence 367888888899999986
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=50.48 E-value=30 Score=28.36 Aligned_cols=80 Identities=19% Similarity=0.110 Sum_probs=48.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.|+......+|.-..+ .......|++++..+ ....|..+.++|++.++. +++.++..| |-...+
T Consensus 111 ~~gd~vl~~~~~~~~~~~~~---~~~~~~~g~~~~~~~---~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l 183 (406)
T 1kmj_A 111 RAGDNIIISQMEHHANIVPW---QMLCARVGAELRVIP---LNPDGTLQLETLPTLFDE-KTRLLAITHVSNVLGTENPL 183 (406)
T ss_dssp CTTCEEEEETTCCGGGTHHH---HHHHHHHTCEEEEEC---BCTTSCBCGGGHHHHCCT-TEEEEEEESBCTTTCCBCCH
T ss_pred CCCCEEEEecccchHHHHHH---HHHHHhCCCEEEEEe---cCCCCCcCHHHHHHHhcc-CCeEEEEeCCCccccCcCCH
Confidence 47888888876555532222 222344587776322 112355667777776643 566666666 544458
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 184 ~~i~~l~~~~~~ 195 (406)
T 1kmj_A 184 AEMITLAHQHGA 195 (406)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 888899998875
No 87
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=50.10 E-value=45 Score=27.59 Aligned_cols=74 Identities=15% Similarity=0.086 Sum_probs=43.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee---c-CCCHHHHHHHHHHcCCCEEEEcCCCh----
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS---G-HGYRGELEEVLKLVKPQHFLPIHGEL---- 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S---G-HA~~~dL~~~i~~i~Pk~iiPVHge~---- 202 (221)
+++|.|+...+..+++. ..+...|++++ .+... | .-+.++|.+.++. +++.++..|-.+
T Consensus 123 ~~gd~Vl~~~~~~~~~~-------~~~~~~g~~~~-----~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~ 189 (406)
T 1xi9_A 123 DPGDEILVPGPSYPPYT-------GLVKFYGGKPV-----EYRTIEEEDWQPDIDDIRKKITD-RTKAIAVINPNNPTGA 189 (406)
T ss_dssp CTTCEEEEEESCCHHHH-------HHHHHTTCEEE-----EEEEEGGGTSEECHHHHHHHCCT-TEEEEEEESSCTTTCC
T ss_pred CCCCEEEEcCCCCccHH-------HHHHHcCCEEE-----EeecCCCcCCcCCHHHHHHhhCc-CceEEEEECCCCCCCC
Confidence 37888888876444322 33445788776 22221 1 1356666655543 566666555322
Q ss_pred ----HHHHHHHHHHHhcCC
Q 045468 203 ----LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ----~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 190 ~~~~~~l~~i~~~a~~~~~ 208 (406)
T 1xi9_A 190 LYDKKTLEEILNIAGEYEI 208 (406)
T ss_dssp CCCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCC
Confidence 368888899988874
No 88
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=49.75 E-value=81 Score=23.76 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=42.8
Q ss_pred CEEEEEecCCCCcHHH-HHHHHHHHHHcCCeEEecCCceeeeecCC--CHHHHHHHHHHcCCCEEEEcCCChH-------
Q 045468 134 DVILYSAKVIPGNESR-VMKMLNRISEIGSTIVMGRNEGLHTSGHG--YRGELEEVLKLVKPQHFLPIHGELL------- 203 (221)
Q Consensus 134 ~~vI~s~~~~pg~e~~-~~~~~~~l~~~g~~v~~~~~~~~h~SGHA--~~~dL~~~i~~i~Pk~iiPVHge~~------- 203 (221)
..+.+++ ..|-..+. ...+...+.+.|+.+ .+.+.|.. ..+.+.++.+.+ ....|.++|..+
T Consensus 71 ~~i~~~G-GEP~l~~~~l~~l~~~~~~~~~~i------~i~Tng~~~~~~~~~~~l~~~~-~~v~isld~~~~~~~~~~~ 142 (245)
T 3c8f_A 71 GGVTASG-GEAILQAEFVRDWFRACKKEGIHT------CLDTNGFVRRYDPVIDELLEVT-DLVMLDLKQMNDEIHQNLV 142 (245)
T ss_dssp CEEEEEE-SCGGGGHHHHHHHHHHHHTTTCCE------EEEECCCCCCCCHHHHHHHHTC-SEEEEECCCSSHHHHHHHH
T ss_pred CeEEEEC-CCcCCCHHHHHHHHHHHHHcCCcE------EEEeCCCcCcCHHHHHHHHHhC-CEEEEeCCCCCHHHhhhcc
Confidence 4556666 34432333 345666666666654 35666765 666777776653 346677777533
Q ss_pred -----HHHHHHHHHHhcCC
Q 045468 204 -----FLKEHELLGRSTGI 217 (221)
Q Consensus 204 -----~~~~~~~~~~~~g~ 217 (221)
...+..+.+++.|+
T Consensus 143 ~~~~~~~~~~i~~l~~~g~ 161 (245)
T 3c8f_A 143 GVSNHRTLEFAKYLANKNV 161 (245)
T ss_dssp SSCSHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHhcCC
Confidence 33344555556665
No 89
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=49.60 E-value=35 Score=28.12 Aligned_cols=80 Identities=14% Similarity=0.048 Sum_probs=47.1
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC-----ChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG-----ELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-----e~~~~ 205 (221)
+++|.|+...+..++.-.. +.......|++++..+ ....|..+.++|++.++. +++.++..|. ....+
T Consensus 116 ~~gd~Vl~~~~~~~~~~~~---~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l 188 (420)
T 1t3i_A 116 KAGDEIITTVMEHHSNLVP---WQMVAAKTGAVLKFVQ---LDEQESFDLEHFKTLLSE-KTKLVTVVHISNTLGCVNPA 188 (420)
T ss_dssp CTTCEEEEETTCCGGGTHH---HHHHHHHHCCEEEEEC---BCTTSSBCHHHHHHHCCT-TEEEEEEESBCTTTCBBCCH
T ss_pred CCCCEEEECcchhHHHHHH---HHHHHHhcCcEEEEec---cCCCCCcCHHHHHHhhCC-CceEEEEeCCcccccCcCCH
Confidence 4788888877655553211 1223345688776222 112344566666665532 5667776663 33357
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 189 ~~i~~l~~~~~~ 200 (420)
T 1t3i_A 189 EEIAQLAHQAGA 200 (420)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 888889998874
No 90
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=49.49 E-value=87 Score=27.07 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=47.0
Q ss_pred CEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee----cCCCHHHHHHHHHHc----CCCEEEEcCCCh---
Q 045468 134 DVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS----GHGYRGELEEVLKLV----KPQHFLPIHGEL--- 202 (221)
Q Consensus 134 ~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S----GHA~~~dL~~~i~~i----~Pk~iiPVHge~--- 202 (221)
|.|+...+..+++. ..+...|++++ .+..- ..-+.++|++.++.- +|+.++-++--+
T Consensus 182 d~Vlv~~p~y~~~~-------~~~~~~g~~~v-----~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG 249 (498)
T 3ihj_A 182 TGVMIPIPQYPLYS-------AVISELDAIQV-----NYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTG 249 (498)
T ss_dssp EEEEEEESCCTHHH-------HHHHHTTCEEE-----EEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTC
T ss_pred CEEEEeCCCchhHH-------HHHHHcCCEEE-----EeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCC
Confidence 48888776555332 33455688776 22221 145889999988875 577777665433
Q ss_pred -----HHHHHHHHHHHhcCC
Q 045468 203 -----LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 -----~~~~~~~~~~~~~g~ 217 (221)
.++.+.+++|++.|+
T Consensus 250 ~v~s~~~l~~i~~la~~~~~ 269 (498)
T 3ihj_A 250 QVQSRKCIEDVIHFAWEEKL 269 (498)
T ss_dssp CCCCHHHHHHHHHHHHHHTC
T ss_pred CcCCHHHHHHHHHHHHHcCc
Confidence 368888889988774
No 91
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=49.30 E-value=37 Score=28.19 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=44.6
Q ss_pred ccCCCCEEEEEecCCCC---cHHHHHHHHHHHHHcCCeEEecC---CceeeeecCC--CHHHHHHHHHHcCCCEEEEcCC
Q 045468 129 KLTNEDVILYSAKVIPG---NESRVMKMLNRISEIGSTIVMGR---NEGLHTSGHG--YRGELEEVLKLVKPQHFLPIHG 200 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg---~e~~~~~~~~~l~~~g~~v~~~~---~~~~h~SGHA--~~~dL~~~i~~i~Pk~iiPVHg 200 (221)
.|++||+|-+.++-.+- ..........+|+..|.+|+..+ ...-++||+. -.+||.++...=+.+.|+++-|
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 46789998666543332 24456677788889999887432 1122355553 3345555554444578888888
Q ss_pred Ch
Q 045468 201 EL 202 (221)
Q Consensus 201 e~ 202 (221)
.+
T Consensus 88 G~ 89 (331)
T 4e5s_A 88 GY 89 (331)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 92
>3iab_A Ribonucleases P/MRP protein subunit POP6; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=49.25 E-value=26 Score=25.92 Aligned_cols=25 Identities=12% Similarity=0.138 Sum_probs=22.6
Q ss_pred CCcEEEEeccccHHHHHHHHHHHHH
Q 045468 32 KGRVITTQFASNIHRLGSVKAAADL 56 (221)
Q Consensus 32 ~g~viv~~~a~ni~Rl~~i~~~a~~ 56 (221)
++.|++..|+.+|.++.+|++++++
T Consensus 76 ~~~V~l~syg~hIQKmLSIvEI~Kk 100 (158)
T 3iab_A 76 QQVVCIFSYGPHIQKMLSILEIFKK 100 (158)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred CceEEEEecChHHHHHHHHHHHHHH
Confidence 4688888899999999999999987
No 93
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=48.76 E-value=11 Score=30.78 Aligned_cols=77 Identities=13% Similarity=0.221 Sum_probs=46.2
Q ss_pred cCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHH
Q 045468 130 LTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKE 207 (221)
Q Consensus 130 ~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~ 207 (221)
++++|.|+......+++... +...|++++..+ ....|..+.++|++.++. +++.++++| |....+.+
T Consensus 71 ~~~gd~Vl~~~~~~~~~~~~-------~~~~g~~~~~~~---~~~~~~~d~~~l~~~i~~-~~~~v~~~~~tG~~~~l~~ 139 (375)
T 2fnu_A 71 SADRNEIITTPISFVATANM-------LLESGYTPVFAG---IKNDGNIDELALEKLINE-RTKAIVSVDYAGKSVEVES 139 (375)
T ss_dssp CTTSCEEEECSSSCTHHHHH-------HHHTTCEEEECC---BCTTSSBCGGGSGGGCCT-TEEEEEEECGGGCCCCHHH
T ss_pred CCCCCEEEECCCccHhHHHH-------HHHCCCEEEEec---cCCCCCCCHHHHHhhcCc-CceEEEEeCCcCCccCHHH
Confidence 35788888877655544322 334788776322 111245566777655432 456678877 44446778
Q ss_pred HHHHHHhcCC
Q 045468 208 HELLGRSTGI 217 (221)
Q Consensus 208 ~~~~~~~~g~ 217 (221)
.++++++.|+
T Consensus 140 i~~l~~~~~~ 149 (375)
T 2fnu_A 140 VQKLCKKHSL 149 (375)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 8888888774
No 94
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=48.39 E-value=76 Score=26.21 Aligned_cols=78 Identities=6% Similarity=-0.080 Sum_probs=44.6
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC--------hH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE--------LL 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge--------~~ 203 (221)
++|.|+...+..+++. ..+...|++++..+...-...+.-+.++|++.++. +|+.++-.+-. ..
T Consensus 109 ~gd~Vl~~~~~y~~~~-------~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~ 180 (411)
T 2o0r_A 109 PGSEVLLIEPFYDSYS-------PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSAT 180 (411)
T ss_dssp TTCEEEEEESCCTTHH-------HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred CCCEEEEeCCCcHhHH-------HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHH
Confidence 7889888887666643 23456788776211100000133566666665532 45666533322 14
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 181 ~l~~i~~~~~~~~~ 194 (411)
T 2o0r_A 181 ELAAIAEIAVAANL 194 (411)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 67888889988874
No 95
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=48.29 E-value=40 Score=28.94 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=52.8
Q ss_pred CCCCEEEEEe-cCCCCcHHHHHHHH--------HHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH-cCCCEEEEcCC
Q 045468 131 TNEDVILYSA-KVIPGNESRVMKML--------NRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL-VKPQHFLPIHG 200 (221)
Q Consensus 131 ~~~~~vI~s~-~~~pg~e~~~~~~~--------~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~-i~Pk~iiPVHg 200 (221)
++||.++.+. ...+++.. +. ..+...|+++...+ . -.|..+.++|++.++. -+||.++-.++
T Consensus 114 ~pGD~Vl~~~~~~y~~~~~----~~g~~~~~~~~~l~~~G~~~~~v~---~-~~~~~d~e~l~~~i~~~~~tklV~i~~s 185 (427)
T 3hvy_A 114 RPNDTMMSICGMPYDTLHD----IIGMDDSKKVGSLREYGVKYKMVD---L-KDGKVDINTVKEELKKDDSIKLIHIQRS 185 (427)
T ss_dssp CTTCEEEECSSSCCGGGHH----HHTCCTTCCSCCTGGGTCEEEECC---C-BTTBCCHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCCEEEEeCCCCchhHHH----HhccccchhhhHHHHcCCEEEEec---C-CCCCcCHHHHHHHhhCCCCCEEEEEECC
Confidence 5899988876 43333331 22 34556788776211 1 3567889999998875 57788887772
Q ss_pred ---------ChHHHHHHHHHHHh--cCC
Q 045468 201 ---------ELLFLKEHELLGRS--TGI 217 (221)
Q Consensus 201 ---------e~~~~~~~~~~~~~--~g~ 217 (221)
.-.++.+.+++|++ .|+
T Consensus 186 ~gyp~nptg~v~dl~~i~~ia~~~~~g~ 213 (427)
T 3hvy_A 186 TGYGWRKSLRIAEIAEIIKSIREVNENV 213 (427)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHHHHCSSS
T ss_pred CCCCCCccccHHHHHHHHHHHHHhCCCC
Confidence 33588899999998 663
No 96
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=47.63 E-value=1.1e+02 Score=24.89 Aligned_cols=79 Identities=10% Similarity=-0.022 Sum_probs=47.2
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCC--EEEEc--C---C---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQ--HFLPI--H---G--- 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk--~iiPV--H---g--- 200 (221)
+++|.|+...+..+++.. .+...|.+++..+.. -.-.+.-+.+++.+.++.++|+ .++-. | |
T Consensus 121 ~~gd~Vlv~~p~~~~~~~-------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~ 192 (401)
T 7aat_A 121 KFSRDVYLPKPSWGNHTP-------IFRDAGLQLQAYRYY-DPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDP 192 (401)
T ss_dssp TTCCEEEEEESCCTTHHH-------HHHHTTCEEEEEECE-ETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCC
T ss_pred cCCCEEEEcCCCchhHHH-------HHHHcCCeeEeeeee-ccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCC
Confidence 378999998876665432 344568877621110 0013566777777777666554 32311 1 2
Q ss_pred ChHHHHHHHHHHHhcCC
Q 045468 201 ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 201 e~~~~~~~~~~~~~~g~ 217 (221)
...++.+.++++++.|+
T Consensus 193 ~~~~l~~i~~~~~~~~~ 209 (401)
T 7aat_A 193 RQEQWKELASVVKKRNL 209 (401)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhCCc
Confidence 34578888999998874
No 97
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=47.43 E-value=33 Score=28.17 Aligned_cols=75 Identities=12% Similarity=-0.016 Sum_probs=44.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee----ecCCCHHHHHHHHHHcCCC-EEEEc---CC--
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT----SGHGYRGELEEVLKLVKPQ-HFLPI---HG-- 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~----SGHA~~~dL~~~i~~i~Pk-~iiPV---Hg-- 200 (221)
+++|.|+...+ ++... .+.+...|++++ .+.. .+.-+.++|.+.++..+|+ .++-+ |.
T Consensus 119 ~~gd~vl~~~p---~~~~~----~~~~~~~g~~~~-----~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~npt 186 (397)
T 3fsl_A 119 FPESGVWVSDP---TWENH----VAIFAGAGFEVS-----TYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPT 186 (397)
T ss_dssp CTTCCEEEESS---CCHHH----HHHHHHTTCCEE-----EECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTT
T ss_pred CCCCeEEEeCC---CchhH----HHHHHHcCCceE-----EEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 37888887664 43322 344556788776 2322 2334677777777655465 33322 21
Q ss_pred ----ChHHHHHHHHHHHhcCC
Q 045468 201 ----ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 201 ----e~~~~~~~~~~~~~~g~ 217 (221)
...++.+.++++++.|+
T Consensus 187 G~~~~~~~l~~l~~~~~~~~~ 207 (397)
T 3fsl_A 187 GADLTNDQWDAVIEILKAREL 207 (397)
T ss_dssp CCCCCHHHHHHHHHHHHHTTC
T ss_pred CcCCCHHHHHHHHHHHHhCCE
Confidence 22578888899988874
No 98
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=47.40 E-value=23 Score=29.74 Aligned_cols=76 Identities=11% Similarity=0.168 Sum_probs=45.8
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEHE 209 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~~ 209 (221)
++|.|+...+..+++.. .+...|++++..+.+. -.+.-+.++|...++. +++.++++| |....+.+.+
T Consensus 89 ~gd~Vlv~~~~~~~~~~-------~~~~~G~~~~~v~~~~--~~~~~d~~~l~~~i~~-~~~~v~~~~~tG~~~~l~~i~ 158 (424)
T 2po3_A 89 LTGEVIMPSMTFAATPH-------ALRWIGLTPVFADIDP--DTGNLDPDQVAAAVTP-RTSAVVGVHLWGRPCAADQLR 158 (424)
T ss_dssp CCSEEEEESSSCTHHHH-------HHHHTTCEEEEECBCT--TTSSBCHHHHGGGCCT-TEEEEEEECGGGCCCCHHHHH
T ss_pred CCCEEEECCCccHHHHH-------HHHHcCCEEEEEecCC--CcCCcCHHHHHHhhCc-CCcEEEEECCCCCcCCHHHHH
Confidence 46788888775554432 2345688776321110 1234466666655432 567787776 5555778888
Q ss_pred HHHHhcCC
Q 045468 210 LLGRSTGI 217 (221)
Q Consensus 210 ~~~~~~g~ 217 (221)
+++++.|+
T Consensus 159 ~la~~~~~ 166 (424)
T 2po3_A 159 KVADEHGL 166 (424)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 89988874
No 99
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=47.38 E-value=55 Score=25.80 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHcCCeEEecCCceeeeecC
Q 045468 148 SRVMKMLNRISEIGSTIVMGRNEGLHTSGH 177 (221)
Q Consensus 148 ~~~~~~~~~l~~~g~~v~~~~~~~~h~SGH 177 (221)
.....+...+.+.|+++. .+|+++|
T Consensus 66 ~~~~~~~~~l~~~gl~i~-----~~~~~~~ 90 (295)
T 3cqj_A 66 EQRLALVNAIVETGVRVP-----SMCLSAH 90 (295)
T ss_dssp HHHHHHHHHHHHHCCEEE-----EEEEGGG
T ss_pred HHHHHHHHHHHHcCCeEE-----EEecCcc
Confidence 344567778888888775 4666655
No 100
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=46.98 E-value=60 Score=26.48 Aligned_cols=77 Identities=9% Similarity=-0.010 Sum_probs=43.0
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------H
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL--------L 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~--------~ 203 (221)
++|.|+......+++. ..+...|++++..+... ...+.-+.++|++.++. +++.++-.|-.+ .
T Consensus 113 ~gd~vl~~~~~~~~~~-------~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~ 183 (388)
T 1j32_A 113 PGDEVIIPAPFWVSYP-------EMVKLAEGTPVILPTTV-ETQFKVSPEQIRQAITP-KTKLLVFNTPSNPTGMVYTPD 183 (388)
T ss_dssp TTCEEEEESSCCTHHH-------HHHHHTTCEEEEECCCG-GGTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred CCCEEEEcCCCChhHH-------HHHHHcCCEEEEecCCc-ccCCCCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHH
Confidence 7888888776555432 23445788776211100 00123456666655532 455666444222 4
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 184 ~l~~i~~~~~~~~~ 197 (388)
T 1j32_A 184 EVRAIAQVAVEAGL 197 (388)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCC
Confidence 68888899988874
No 101
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=46.89 E-value=31 Score=30.37 Aligned_cols=77 Identities=13% Similarity=0.068 Sum_probs=52.0
Q ss_pred CCCCEEEEEecCCC------CcH-HHHHHHHHHHHHcCCeEEecCCce----------eeeecCCCHHHHHHHHHHcC--
Q 045468 131 TNEDVILYSAKVIP------GNE-SRVMKMLNRISEIGSTIVMGRNEG----------LHTSGHGYRGELEEVLKLVK-- 191 (221)
Q Consensus 131 ~~~~~vI~s~~~~p------g~e-~~~~~~~~~l~~~g~~v~~~~~~~----------~h~SGHA~~~dL~~~i~~i~-- 191 (221)
..++.+|+-.+.+. |.- .....-++-|..+|+..++..... -..+.|.+- ...++
T Consensus 13 ~~~~~vi~q~F~w~~~~~~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~------~~~id~~ 86 (527)
T 1gcy_A 13 HGGDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYF------WHDFNKN 86 (527)
T ss_dssp GGGCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTT------CSSSCSC
T ss_pred cCCCcEEEEEEEcCCCcccCCcHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcc------cccCCCC
Confidence 34566788888766 443 444445689999999888532111 123567665 44556
Q ss_pred CCEEEEcCCChHHHHHHHHHHHhcCCC
Q 045468 192 PQHFLPIHGELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 192 Pk~iiPVHge~~~~~~~~~~~~~~g~~ 218 (221)
|++ |...++.++++.|++.|+.
T Consensus 87 p~~-----Gt~~dfk~Lv~~aH~~GI~ 108 (527)
T 1gcy_A 87 GRY-----GSDAQLRQAASALGGAGVK 108 (527)
T ss_dssp SSS-----CCHHHHHHHHHHHHHTTCE
T ss_pred CCC-----CCHHHHHHHHHHHHHCCCE
Confidence 555 8899999999999999973
No 102
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=46.77 E-value=25 Score=29.06 Aligned_cols=81 Identities=11% Similarity=0.027 Sum_probs=47.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.||.+....+++......+ -...|++++..+.+. ..|.-+.++|++.++. +++.++..| |....+
T Consensus 111 ~~gd~vi~~~~~~~~~~~~~~~~---~~~~g~~v~~v~~~~--~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~l 184 (406)
T 3cai_A 111 GLGYEVIVSRLDDEANIAPWLRA---AHRYGAKVKWAEVDI--ETGELPTWQWESLISK-STRLVAVNSASGTLGGVTDL 184 (406)
T ss_dssp BTTCEEEEETTSCGGGTHHHHHH---HHHHBCEEEEECCCT--TTCCCCGGGHHHHCCT-TEEEEEEESBCTTTCBBCCC
T ss_pred CCCCEEEEcCCccHHHHHHHHHH---HHhcCCeEEEEecCc--ccCCcCHHHHHHHhCC-CceEEEEeCCcCCccccCCH
Confidence 47888888876555543322111 123588776322110 2355677777766542 456777666 444457
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 185 ~~i~~l~~~~~~ 196 (406)
T 3cai_A 185 RAMTKLVHDVGA 196 (406)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 788888888874
No 103
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=46.77 E-value=15 Score=30.96 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=26.9
Q ss_pred eecCCCHHHHHHHHHHcCCCEEEEcCCChH
Q 045468 174 TSGHGYRGELEEVLKLVKPQHFLPIHGELL 203 (221)
Q Consensus 174 ~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~ 203 (221)
-.||...++..++++..+++.+||+|=..+
T Consensus 286 ~~~H~t~~~A~~~a~~~~~k~lil~H~s~r 315 (368)
T 3zwf_A 286 EHGHSTPQMAATFAKLCRAKRLVLTHFSQR 315 (368)
T ss_dssp HTTCCCHHHHHHHHHHTTCSEEEEECBCCC
T ss_pred cCCCCCHHHHHHHHHHcCCCEEEEEeeCcc
Confidence 478999999999999999999999996543
No 104
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=46.58 E-value=63 Score=26.51 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=44.2
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee----cCCCHHHHHHHHHHcCCCEEEEcC-----CC-
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS----GHGYRGELEEVLKLVKPQHFLPIH-----GE- 201 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S----GHA~~~dL~~~i~~i~Pk~iiPVH-----ge- 201 (221)
++|.|+...+..+++.. .+...|++++. +... +.-+.++|++.++. +++.++-.| |-
T Consensus 124 ~gd~Vl~~~~~~~~~~~-------~~~~~g~~~~~-----v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~ 190 (389)
T 1o4s_A 124 PGDEVIVFSPVWVSYIP-------QIILAGGTVNV-----VETFMSKNFQPSLEEVEGLLVG-KTKAVLINSPNNPTGVV 190 (389)
T ss_dssp TTCEEEEEESCCTTHHH-------HHHHTTCEEEE-----EECCGGGTTCCCHHHHHHTCCT-TEEEEEEESSCTTTCCC
T ss_pred CCCEEEEcCCCchhHHH-------HHHHcCCEEEE-----EecCCccCCCCCHHHHHHhccc-CceEEEEcCCCCCCCCC
Confidence 78888888876666432 24457887762 2211 22356666655432 456566555 22
Q ss_pred --hHHHHHHHHHHHhcCC
Q 045468 202 --LLFLKEHELLGRSTGI 217 (221)
Q Consensus 202 --~~~~~~~~~~~~~~g~ 217 (221)
..++.+.++++++.|+
T Consensus 191 ~~~~~l~~l~~~~~~~~~ 208 (389)
T 1o4s_A 191 YRREFLEGLVRLAKKRNF 208 (389)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCC
Confidence 2468888889988874
No 105
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=46.21 E-value=45 Score=27.55 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=46.1
Q ss_pred ccCCCCEEEEEecCCC--C-cHHHHHHHHHHHHHcCCeEEecC---CceeeeecCC--CHHHHHHHHHHcCCCEEEEcCC
Q 045468 129 KLTNEDVILYSAKVIP--G-NESRVMKMLNRISEIGSTIVMGR---NEGLHTSGHG--YRGELEEVLKLVKPQHFLPIHG 200 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~p--g-~e~~~~~~~~~l~~~g~~v~~~~---~~~~h~SGHA--~~~dL~~~i~~i~Pk~iiPVHg 200 (221)
+|++||+|-+.++-.+ . .+........+|+..|.+|+... ...-++||+. -.+||.++...=+-+.|+++-|
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 4678999966654322 2 23456667789999999887432 1123456664 2346666655445568999988
Q ss_pred Ch
Q 045468 201 EL 202 (221)
Q Consensus 201 e~ 202 (221)
.+
T Consensus 88 G~ 89 (327)
T 4h1h_A 88 GF 89 (327)
T ss_dssp CS
T ss_pred ch
Confidence 64
No 106
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=46.16 E-value=86 Score=26.87 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=44.7
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC-CEEEEc--C---CChHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP-QHFLPI--H---GELLFL 205 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P-k~iiPV--H---ge~~~~ 205 (221)
+||.||.+.. .|-.-...+...+...|+++. .+.. .+.++|+..++. ++ +.++-- + |...++
T Consensus 152 ~Gd~Vi~~~~---~y~~~~~~~~~~~~~~G~~v~-----~v~~---~d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl 219 (445)
T 1qgn_A 152 AGGHIVTTTD---CYRKTRIFIETILPKMGITAT-----VIDP---ADVGALELALNQ-KKVNLFFTESPTNPFLRCVDI 219 (445)
T ss_dssp SSCEEEEETT---SCHHHHHHHHHTGGGGTCEEE-----EECS---SCHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCH
T ss_pred CCCEEEEcCC---CchhHHHHHHHHHHHcCCEEE-----EeCC---CCHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCH
Confidence 7888887764 333222122234567798876 2321 267777777664 34 555532 2 455578
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 220 ~~I~~la~~~g~ 231 (445)
T 1qgn_A 220 ELVSKLCHEKGA 231 (445)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 889999999885
No 107
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=45.90 E-value=50 Score=20.21 Aligned_cols=47 Identities=9% Similarity=0.011 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHHHHhcC-CcEEEEe-ccccHHHHHHHHHHHHHcCC
Q 045468 13 RTTSESVVKDALMRHVSAAK-GRVITTQ-FASNIHRLGSVKAAADLTGR 59 (221)
Q Consensus 13 ~~~sE~~v~~~i~~~~~~~~-g~viv~~-~a~ni~Rl~~i~~~a~~~gR 59 (221)
...+..++...+.+.....+ ..|+|-+ -....+++..++.+|++.|-
T Consensus 25 ~~v~~~~L~~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 25 EGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp EEECHHHHHHHHHHHHHHCTTCCEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHHhhCCCceEEEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 45677888888888776544 4677777 34589999999999999874
No 108
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=45.51 E-value=64 Score=26.70 Aligned_cols=74 Identities=9% Similarity=-0.055 Sum_probs=44.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc---CCCEEEEc----CC---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV---KPQHFLPI----HG--- 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i---~Pk~iiPV----Hg--- 200 (221)
+++|.|+...+..+++. ..+...|++++..+.. .-.++-+.++|++.++.. +++.++-+ |.
T Consensus 124 ~~gd~Vl~~~p~~~~~~-------~~~~~~g~~~~~v~~~--~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG 194 (418)
T 3rq1_A 124 EPGDEVLTADWYWGAYR-------VICSDTGRTLVTYSLF--DEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTG 194 (418)
T ss_dssp CTTCEEEEESSCCTHHH-------HHHHHTTCEEEEECSB--CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTC
T ss_pred CCCCEEEECCCCchhHH-------HHHHHcCCEEEEEeee--CCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCC
Confidence 37899888876544433 2345678887632210 012577899999888764 66644443 32
Q ss_pred ---ChHHHHHHHHHHH
Q 045468 201 ---ELLFLKEHELLGR 213 (221)
Q Consensus 201 ---e~~~~~~~~~~~~ 213 (221)
...++.+.+++++
T Consensus 195 ~~~~~~~l~~l~~~~~ 210 (418)
T 3rq1_A 195 YSIEDKDWDSILNFLK 210 (418)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 2346777777776
No 109
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=44.89 E-value=50 Score=27.63 Aligned_cols=75 Identities=11% Similarity=0.109 Sum_probs=42.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
++||.|+.+.+..+++. ..+...+...|++++ .+... +.++|.+.++. +++.++-.+ |...++
T Consensus 99 ~~gd~Vl~~~~~y~~~~---~~~~~~~~~~g~~~~-----~v~~~---d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l 166 (404)
T 1e5e_A 99 KAGDHLISDECLYGCTH---ALFEHALTKFGIQVD-----FINTA---IPGEVKKHMKP-NTKIVYFETPANPTLKIIDM 166 (404)
T ss_dssp CTTCEEEEESCCCHHHH---HHHHTHHHHTTCEEE-----EECTT---STTHHHHHCCT-TEEEEEEESSCTTTCCCCCH
T ss_pred CCCCEEEEeCCCchhHH---HHHHHHHHHcCCEEE-----EECCC---CHHHHHHhcCC-CCcEEEEECCCCCCCcccCH
Confidence 37888888765433332 222234667898876 22211 45555544321 345555433 344468
Q ss_pred HHHHHHHHh-cCC
Q 045468 206 KEHELLGRS-TGI 217 (221)
Q Consensus 206 ~~~~~~~~~-~g~ 217 (221)
.+.++++++ .|+
T Consensus 167 ~~i~~la~~~~~~ 179 (404)
T 1e5e_A 167 ERVCKDAHSQEGV 179 (404)
T ss_dssp HHHHHHHHTSTTC
T ss_pred HHHHHHHHhhcCC
Confidence 888999998 774
No 110
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=44.87 E-value=23 Score=29.58 Aligned_cols=77 Identities=10% Similarity=0.164 Sum_probs=46.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--GELLFLKEH 208 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~~~ 208 (221)
+++|.|+......+++.. .+...|++++..+.+. ..+.-+.++|++.++. +++.+++.| |....+.+.
T Consensus 80 ~~gd~Vl~~~~~~~~~~~-------~~~~~g~~~~~~~~~~--~~~~~d~~~l~~~i~~-~~~~v~~~~~~G~~~~~~~i 149 (418)
T 2c81_A 80 GEGDEVIVPSLTWIATAT-------AVLNVNALPVFVDVEA--DTYCIDPQLIKSAITD-KTKAIIPVHLFGSMANMDEI 149 (418)
T ss_dssp CTTCEEEEESSSCTHHHH-------HHHHTTCEEEEECBCT--TTCSBCHHHHGGGCCT-TEEEECCBCCTTCCCCHHHH
T ss_pred CCcCEEEECCCccHhHHH-------HHHHcCCEEEEEecCC--CCCCcCHHHHHHhhCC-CCeEEEEeCCcCCcccHHHH
Confidence 478888888765554432 2346788776211100 1344566666655432 456777665 455577888
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 150 ~~~~~~~~~ 158 (418)
T 2c81_A 150 NEIAQEHNL 158 (418)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHCCC
Confidence 888988874
No 111
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=44.40 E-value=16 Score=30.13 Aligned_cols=79 Identities=16% Similarity=0.014 Sum_probs=47.4
Q ss_pred CCCC-EEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC-----hHH
Q 045468 131 TNED-VILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE-----LLF 204 (221)
Q Consensus 131 ~~~~-~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge-----~~~ 204 (221)
+++| .|+.+....|++-.. ...+...|++++..+. ...|.-+.++|.+.+.. +++.++..|-. ...
T Consensus 106 ~~gd~~Vl~~~~~~~~~~~~----~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~ 177 (400)
T 3vax_A 106 RTGRRHIITSAIEHKAVLEP----LEHLAGRGFEVDFLTP---GPSGRISVEGVMERLRP-DTLLVSLMHVNNETGVIQP 177 (400)
T ss_dssp HHTCCEEEEETTSCHHHHHH----HHHHHTTTCEEEEECC---CTTCCCCHHHHHTTCCT-TEEEEECCSBCTTTCBBCC
T ss_pred cCCCCEEEECccccHhHHHH----HHHHHhcCCeEEEEcc---CCCCCcCHHHHHHhcCC-CceEEEEECCCCCceeeCc
Confidence 3788 888887654443322 2334567888763221 12456667777665532 45677766633 335
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 178 l~~i~~la~~~~~ 190 (400)
T 3vax_A 178 VAELAQQLRATPT 190 (400)
T ss_dssp HHHHHHHHTTSSC
T ss_pred HHHHHHHHHhcCC
Confidence 7788888888874
No 112
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=44.39 E-value=41 Score=26.82 Aligned_cols=76 Identities=12% Similarity=0.024 Sum_probs=48.7
Q ss_pred CEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHHHHH
Q 045468 134 DVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFLKEH 208 (221)
Q Consensus 134 ~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~~~~ 208 (221)
|.++.+....+++ .+.......|++++..+ ....|+-+.++|++.++.-+|+.++..| |-...+.+.
T Consensus 75 d~vl~~~~~~~~~-----~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i 146 (353)
T 2yrr_A 75 GPVLVLVNGAFSQ-----RVAEMAALHGLDPEVLD---FPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAI 146 (353)
T ss_dssp CCEEEEECSHHHH-----HHHHHHHHTTCCEEEEE---CCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHH
T ss_pred CcEEEEcCCCchH-----HHHHHHHHcCCceEEEe---CCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHH
Confidence 5677666543443 22344456788776322 1224678899999888765788887777 433457788
Q ss_pred HHHHHhcCC
Q 045468 209 ELLGRSTGI 217 (221)
Q Consensus 209 ~~~~~~~g~ 217 (221)
++++++.|+
T Consensus 147 ~~l~~~~~~ 155 (353)
T 2yrr_A 147 GALAKEAGA 155 (353)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 888888774
No 113
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=43.83 E-value=46 Score=27.04 Aligned_cols=68 Identities=18% Similarity=0.092 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCC---EEEEcCC--ChHHHHHHHHHHHhcCCCC
Q 045468 148 SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQ---HFLPIHG--ELLFLKEHELLGRSTGIRH 219 (221)
Q Consensus 148 ~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk---~iiPVHg--e~~~~~~~~~~~~~~g~~~ 219 (221)
....++...+.+.|++.+. ...+.|.+.+++..++++.++-. .-|=+|+ ..-...++...|.+.|+..
T Consensus 159 ~~~~~~~~~~~~~G~d~i~----l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVS----LGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEE----EEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHcCCCEEE----EeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 3456677888899998773 45678999999999999999643 3466788 8888999999999999753
No 114
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=43.73 E-value=54 Score=27.70 Aligned_cols=79 Identities=9% Similarity=-0.050 Sum_probs=43.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCcee---------eeecCCCHHHHHHHHHHcCCCEEEEcCCC
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGL---------HTSGHGYRGELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~---------h~SGHA~~~dL~~~i~~i~Pk~iiPVHge 201 (221)
+++|.|+...+..+++.. .+...|++++..+...- ...++-+.++|.+.++ -+++.++-.|-.
T Consensus 140 ~~gd~Vlv~~p~y~~~~~-------~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~ 211 (447)
T 3b46_A 140 NAGDEVIVFEPFFDQYIP-------NIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPH 211 (447)
T ss_dssp CTTCEEEEEESCCTTHHH-------HHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSC
T ss_pred CCCCEEEEeCCCchhHHH-------HHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCC
Confidence 378998888876666443 24456887662110000 0012345555555443 134555543422
Q ss_pred h--------HHHHHHHHHHHhcCC
Q 045468 202 L--------LFLKEHELLGRSTGI 217 (221)
Q Consensus 202 ~--------~~~~~~~~~~~~~g~ 217 (221)
+ .++.+.++++++.|+
T Consensus 212 nptG~~~~~~~l~~i~~l~~~~~~ 235 (447)
T 3b46_A 212 NPIGKVFTREELTTLGNICVKHNV 235 (447)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccCHHHHHHHHHHHHHcCc
Confidence 2 478888999998874
No 115
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=43.64 E-value=85 Score=22.80 Aligned_cols=14 Identities=0% Similarity=-0.092 Sum_probs=6.4
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
...+..+.+.+.|+
T Consensus 80 ~i~~~i~~l~~~g~ 93 (182)
T 3can_A 80 LILKNIRRVAEADF 93 (182)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCC
Confidence 33444444445554
No 116
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=43.23 E-value=1.3e+02 Score=24.45 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=45.6
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~~ 206 (221)
++|.++.+... +-.-...+.......|+++. .+. +.+.++|.+.++. +++.++-.| |....+.
T Consensus 90 ~g~~vl~~~~~---~~~~~~~~~~~~~~~g~~~~-----~~~---~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~ 157 (386)
T 1cs1_A 90 PGDLLVAPHDC---YGGSYRLFDSLAKRGCYRVL-----FVD---QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIA 157 (386)
T ss_dssp TTCEEEEETTC---CHHHHHHHHHHHTTTSCEEE-----EEC---TTCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHH
T ss_pred CCCEEEEecCC---cHhHHHHHHHHHHhcCCEEE-----EeC---CCCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHH
Confidence 78888777653 33222222233356788775 222 2377788777763 677666544 5555788
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 158 ~i~~l~~~~~~ 168 (386)
T 1cs1_A 158 KICHLAREVGA 168 (386)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 88999998874
No 117
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=43.12 E-value=1.3e+02 Score=24.67 Aligned_cols=74 Identities=5% Similarity=-0.109 Sum_probs=46.1
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee----ecCCCHHHHHHHHHHcCC-CEEEE-cCCCh---
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT----SGHGYRGELEEVLKLVKP-QHFLP-IHGEL--- 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~----SGHA~~~dL~~~i~~i~P-k~iiP-VHge~--- 202 (221)
+||.|+...+..+++. +.+...|++++ .+.. .+.-+.++|.+.++.-+| +.++- .|-.+
T Consensus 123 ~gd~Vl~~~p~~~~~~-------~~~~~~g~~~~-----~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG 190 (412)
T 1yaa_A 123 PDKLVYLSKPTWANHM-------AIFENQGLKTA-----TYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTG 190 (412)
T ss_dssp TTCCEEEEESCCTTHH-------HHHHTTTCCEE-----EEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTC
T ss_pred CCCEEEEeCCCCccHH-------HHHHHcCceEE-----EEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCC
Confidence 7888888887666643 23445688776 2222 234578888888776543 44443 33322
Q ss_pred -----HHHHHHHHHHHhcCC
Q 045468 203 -----LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 -----~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 191 ~~~~~~~l~~l~~~~~~~~~ 210 (412)
T 1yaa_A 191 LDPTSEQWVQIVDAIASKNH 210 (412)
T ss_dssp CCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHCCC
Confidence 367888889988874
No 118
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=42.20 E-value=1.2e+02 Score=23.39 Aligned_cols=83 Identities=16% Similarity=0.267 Sum_probs=47.6
Q ss_pred CCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCC-EEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecC
Q 045468 99 PKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNED-VILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGH 177 (221)
Q Consensus 99 ~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~-~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGH 177 (221)
+.++.|+++|+...+.+.+..+..+. + +.. ..++|..+-. . . ..+-.+.|++++. +.....
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~-----l-~~~I~~Visn~~~a-~-~-----l~~A~~~gIp~~~-----~~~~~~ 68 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPG-----F-PAEIVAVFSDKAEA-G-G-----LAKAEAAGIATQV-----FKRKDF 68 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTT-----C-SEEEEEEEESCTTC-T-H-----HHHHHHTTCCEEE-----CCGGGS
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCC-----C-CcEEEEEEECCccc-H-H-----HHHHHHcCCCEEE-----eCcccc
Confidence 34678999998555555555544331 1 112 3366654211 1 1 2455678988762 211223
Q ss_pred CCH----HHHHHHHHHcCCCEEEEcC
Q 045468 178 GYR----GELEEVLKLVKPQHFLPIH 199 (221)
Q Consensus 178 A~~----~dL~~~i~~i~Pk~iiPVH 199 (221)
.++ +++.+.++..+|+.+|-+.
T Consensus 69 ~~r~~~d~~~~~~l~~~~~Dliv~ag 94 (209)
T 4ds3_A 69 ASKEAHEDAILAALDVLKPDIICLAG 94 (209)
T ss_dssp SSHHHHHHHHHHHHHHHCCSEEEESS
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 444 5788888999999888764
No 119
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=41.71 E-value=80 Score=26.25 Aligned_cols=79 Identities=15% Similarity=0.011 Sum_probs=46.8
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEE--EcCCCh------H
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFL--PIHGEL------L 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~ii--PVHge~------~ 203 (221)
++|.||...+..+++ ...+...|.+++..+...-.-..+.+.++|++.++.-+++.++ ++|+.- .
T Consensus 142 ~gd~Vi~~~~~y~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~ 214 (421)
T 3l8a_A 142 KGDAVLINSPVYYPF-------ARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDND 214 (421)
T ss_dssp TEEEEEEEESCCHHH-------HHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHH
T ss_pred CCCEEEECCCCcHHH-------HHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHH
Confidence 678887776533332 2344556877662111000111245889999888755666555 345432 5
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 215 ~l~~l~~l~~~~~~ 228 (421)
T 3l8a_A 215 DLIKIAELCKKHGV 228 (421)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCC
Confidence 78899999998874
No 120
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=41.55 E-value=1.1e+02 Score=22.95 Aligned_cols=84 Identities=17% Similarity=0.185 Sum_probs=44.9
Q ss_pred CCCCEEEEEecCCCC-cHHHHHHHHHHHHHc-C------CeEEecCCceeeeecCC-----CHHHHHHHHHHc------C
Q 045468 131 TNEDVILYSAKVIPG-NESRVMKMLNRISEI-G------STIVMGRNEGLHTSGHG-----YRGELEEVLKLV------K 191 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg-~e~~~~~~~~~l~~~-g------~~v~~~~~~~~h~SGHA-----~~~dL~~~i~~i------~ 191 (221)
...|.+|+++++..| +-.....++||+.+. + =++. .+.+||-+ ....|+.++..+ .
T Consensus 66 ~~aD~~ii~tPeYn~s~pg~LKn~iDwlsr~~~~~~~~gKpv~-----~v~~S~G~~Gg~~a~~~Lr~vl~~lg~~v~~~ 140 (190)
T 3u7r_A 66 EHSDAVLAITPEYNRSYPGMIKNAIDWATRPYGQNSWKGKPAA-----VIGTSPGVIGAALAQARLKNDLLHVGTVMMSM 140 (190)
T ss_dssp HTSSEEEEECCCBTTBCCHHHHHHHHHHHCSTTCCTTTTCEEE-----EEEEESSTTTTHHHHHHHHHHHHTTTCEECCC
T ss_pred HhCCcEEEechhhcccCCHHHHHHHHHhcccccCCccCCCEEE-----EEEeCCchhhHHHHHHHHHHHHHHcCCEEccC
Confidence 356788888876665 445556677888642 1 1221 34444321 135566666655 3
Q ss_pred CCEEEEcCCCh-----------------HHHHHHHHHHHhcCCCC
Q 045468 192 PQHFLPIHGEL-----------------LFLKEHELLGRSTGIRH 219 (221)
Q Consensus 192 Pk~iiPVHge~-----------------~~~~~~~~~~~~~g~~~ 219 (221)
|...||...+. ..+.++.++++.+|.++
T Consensus 141 p~~~i~~~~~~fd~~G~l~de~~~~~l~~~~~~~~~~i~~~~~e~ 185 (190)
T 3u7r_A 141 PEAYIQWHAEAYAADGSVTDEKTAKFLQGFVDAFVDWIEKHGLEH 185 (190)
T ss_dssp SCCEEECCGGGBCTTSCBCSHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CEEEEeccHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 55666655421 13445566677777653
No 121
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=40.89 E-value=22 Score=26.68 Aligned_cols=34 Identities=26% Similarity=0.562 Sum_probs=24.1
Q ss_pred cCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEE
Q 045468 130 LTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIV 165 (221)
Q Consensus 130 ~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~ 165 (221)
+.++|++|.-+. .|+-.+...+.....+.|++++
T Consensus 90 ~~~~dvvI~iS~--sG~t~~~~~~~~~ak~~g~~vi 123 (201)
T 3fxa_A 90 LQKEDILILISK--GGNTGELLNLIPACKTKGSTLI 123 (201)
T ss_dssp CCTTCEEEEECS--SSCCHHHHTTHHHHHHHTCEEE
T ss_pred CCCCCEEEEEeC--CCCCHHHHHHHHHHHHcCCeEE
Confidence 457888777664 3655555667788888899887
No 122
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=40.79 E-value=81 Score=25.99 Aligned_cols=74 Identities=8% Similarity=-0.148 Sum_probs=44.1
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc---CCCEEEEc----CC---
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV---KPQHFLPI----HG--- 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i---~Pk~iiPV----Hg--- 200 (221)
++||.|+...+..+++. ..+...|++++..+.. ...++-+.++|.+.++.. +++.++-+ |.
T Consensus 123 ~~gd~Vl~~~p~~~~~~-------~~~~~~g~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG 193 (413)
T 3t18_A 123 DEGDPLICHDYYWAPYR-------KICEEFGRNFKTFEFF--TDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTG 193 (413)
T ss_dssp CSSCEEEEESSCCTHHH-------HHHHHHTCEEEEECCB--CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTC
T ss_pred CCCCEEEECCCCcccHH-------HHHHHhCCeEEEeecc--CCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCC
Confidence 37899888776444433 2344568877632210 112577899999888765 66633333 32
Q ss_pred ---ChHHHHHHHHHHH
Q 045468 201 ---ELLFLKEHELLGR 213 (221)
Q Consensus 201 ---e~~~~~~~~~~~~ 213 (221)
...++.+.+++++
T Consensus 194 ~~~~~~~l~~l~~~~~ 209 (413)
T 3t18_A 194 YSLSDEEWDEVITFLK 209 (413)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 2346777777777
No 123
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=40.37 E-value=83 Score=25.96 Aligned_cols=72 Identities=11% Similarity=0.152 Sum_probs=41.4
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEEE--cC---CChHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFLP--IH---GELLF 204 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~iiP--VH---ge~~~ 204 (221)
++|.|+.+....+++.. .+...+...|++++ .+.. . |+..+.+.++| +.++- +| |....
T Consensus 102 ~gd~vi~~~~~~~~~~~---~~~~~~~~~g~~~~-----~v~~---~---d~~~l~~~i~~~~~~v~~~~~~nptG~~~~ 167 (398)
T 2rfv_A 102 QGDHIVSASAIYGCTHA---FLSHSMPKFGINVR-----FVDA---A---KPEEIRAAMRPETKVVYIETPANPTLSLVD 167 (398)
T ss_dssp TTCEEEEESSSCHHHHH---HHHTHHHHTTCEEE-----EECT---T---SHHHHHHHCCTTEEEEEEESSBTTTTBCCC
T ss_pred CCCEEEEcCCCcccHHH---HHHHHHHHcCCEEE-----EeCC---C---CHHHHHHhcCCCCeEEEEECCCCCCCcccC
Confidence 78888887654333322 22233466788776 2221 1 44445555544 45553 23 44446
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 168 l~~i~~l~~~~~~ 180 (398)
T 2rfv_A 168 IETVAGIAHQQGA 180 (398)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 8888999998885
No 124
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=39.62 E-value=92 Score=25.66 Aligned_cols=79 Identities=11% Similarity=-0.026 Sum_probs=42.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCcee-eeec--------CCCHHHHHHHHHHcCCCEEEEcCCC
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGL-HTSG--------HGYRGELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~-h~SG--------HA~~~dL~~~i~~i~Pk~iiPVHge 201 (221)
+++|.|+...+..+++. ..+...|++++..+.... -..| .-+.++|++.++. +++.++-.+-.
T Consensus 113 ~~gd~vl~~~p~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~ 184 (422)
T 3fvs_A 113 DEGDEVIIIEPFFDCYE-------PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPN 184 (422)
T ss_dssp CTTCEEEEEESCCTTHH-------HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSC
T ss_pred CCCCEEEEcCCCchhhH-------HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCC-CceEEEECCCC
Confidence 37888888887666643 234457887762111000 0011 2345555444321 34555533322
Q ss_pred h--------HHHHHHHHHHHhcCC
Q 045468 202 L--------LFLKEHELLGRSTGI 217 (221)
Q Consensus 202 ~--------~~~~~~~~~~~~~g~ 217 (221)
+ .++.+.++++++.|+
T Consensus 185 nptG~~~~~~~l~~i~~~~~~~~~ 208 (422)
T 3fvs_A 185 NPLGKVFSREELELVASLCQQHDV 208 (422)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCc
Confidence 2 268888999988874
No 125
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=39.38 E-value=1.8e+02 Score=24.74 Aligned_cols=138 Identities=10% Similarity=0.045 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHHCC--CCCCCCCCccChhhhhhc-CCCCEEEEecCCC--ccHHHHHH
Q 045468 44 IHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDG--KAPIDPSTLVKVEDIDAY-APKDLLIVTTGSQ--AEPRAALN 118 (221)
Q Consensus 44 i~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~~g--~~~~~~~~~v~~~~~~~~-~~~~~vi~~~g~~--~e~~~~l~ 118 (221)
.+-+..+.+.|+++|-.++-...+. .-++.+.+.+ .++.........+-++.. ...+-+|+.||+. .|....+.
T Consensus 100 ~e~~~~L~~~~~~~Gi~~~stpfD~-~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave 178 (385)
T 1vli_A 100 AEWILPLLDYCREKQVIFLSTVCDE-GSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWR 178 (385)
T ss_dssp GGGHHHHHHHHHHTTCEEECBCCSH-HHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEccCCH-HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHH
Confidence 4566788999999998777655554 3444444432 222211111222222221 1233488999984 33444444
Q ss_pred HHhcCCCCCcccCCCCEEEE---EecCCCCcHHHHHHHHHHHHH-c-CCeEEecCCceeeeecCCCH-HHHHHHHHHcCC
Q 045468 119 LASYGGSHSLKLTNEDVILY---SAKVIPGNESRVMKMLNRISE-I-GSTIVMGRNEGLHTSGHGYR-GELEEVLKLVKP 192 (221)
Q Consensus 119 ~~~~~~~~~~~~~~~~~vI~---s~~~~pg~e~~~~~~~~~l~~-~-g~~v~~~~~~~~h~SGHA~~-~dL~~~i~~i~P 192 (221)
-+.... ..+.+++ |+|+.|=++-.. ..+..|.+ + +++|. .|+|+.. ..+-...-.+..
T Consensus 179 ~i~~~G-------n~~iiLlhc~s~YPtp~~~~nL-~aI~~Lk~~f~~lpVG--------~SdHt~G~~~~~~AAvAlGA 242 (385)
T 1vli_A 179 TIRAEG-------NNQIAIMHCVAKYPAPPEYSNL-SVIPMLAAAFPEAVIG--------FSDHSEHPTEAPCAAVRLGA 242 (385)
T ss_dssp HHHTTT-------CCCEEEEEECSSSSCCGGGCCT-THHHHHHHHSTTSEEE--------EEECCSSSSHHHHHHHHTTC
T ss_pred HHHHCC-------CCcEEEEeccCCCCCChhhcCH-HHHHHHHHHcCCCCEE--------eCCCCCCchHHHHHHHHcCC
Confidence 333210 2345543 333333122121 22344443 4 56553 4888876 666666666666
Q ss_pred CEEEEcC
Q 045468 193 QHFLPIH 199 (221)
Q Consensus 193 k~iiPVH 199 (221)
+ +|=+|
T Consensus 243 ~-iIEkH 248 (385)
T 1vli_A 243 K-LIEKH 248 (385)
T ss_dssp S-EEEEE
T ss_pred C-EEEeC
Confidence 6 77666
No 126
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=39.22 E-value=39 Score=27.28 Aligned_cols=68 Identities=19% Similarity=0.122 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCC---EEEEcCC--ChHHHHHHHHHHHhcCCCC
Q 045468 148 SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQ---HFLPIHG--ELLFLKEHELLGRSTGIRH 219 (221)
Q Consensus 148 ~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk---~iiPVHg--e~~~~~~~~~~~~~~g~~~ 219 (221)
.....+...+.+.|++.+. ...+.|-+.+++..++++.++-. .-+-+|+ ..-...++...|.+.|+..
T Consensus 155 ~~~~~~~~~~~~~G~d~i~----l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~ 227 (295)
T 1ydn_A 155 QAVASVTEQLFSLGCHEVS----LGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRV 227 (295)
T ss_dssp HHHHHHHHHHHHHTCSEEE----EEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHhcCCCEEE----ecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCE
Confidence 4456677888899997762 45688999999999999998543 2355787 7777888888888888753
No 127
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=38.67 E-value=24 Score=31.50 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=27.9
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV 190 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i 190 (221)
.++..|.+.|++++ ++.+| |.+.++++++++.+
T Consensus 60 e~l~~Li~aGmnv~-----RlNfS-Hg~~e~h~~~i~~i 92 (526)
T 4drs_A 60 ESLIGLIDKGMSVA-----RLNFS-HGDHESHFKTLQNI 92 (526)
T ss_dssp HHHHHHHHHTCCEE-----EEETT-SSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHH
Confidence 44577888899998 88876 99999999999877
No 128
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=38.01 E-value=66 Score=26.67 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=43.8
Q ss_pred ccCCCCEEEEEecCCCCc---HHHHHHHHHHHHHcCCeEEecCC---ceeeeecCC--CHHHHHHHHHHcCCCEEEEcCC
Q 045468 129 KLTNEDVILYSAKVIPGN---ESRVMKMLNRISEIGSTIVMGRN---EGLHTSGHG--YRGELEEVLKLVKPQHFLPIHG 200 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~---e~~~~~~~~~l~~~g~~v~~~~~---~~~h~SGHA--~~~dL~~~i~~i~Pk~iiPVHg 200 (221)
.|++||+|-+.++-.+-. .....+...+|+..|.+|+.... ..-++||+. -.+||.++...=+.+.|+++-|
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 467899986666533322 23455667888889998874321 112356653 3345555554434478888888
Q ss_pred Ch
Q 045468 201 EL 202 (221)
Q Consensus 201 e~ 202 (221)
.+
T Consensus 89 G~ 90 (336)
T 3sr3_A 89 GM 90 (336)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 129
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=37.84 E-value=86 Score=25.70 Aligned_cols=82 Identities=18% Similarity=0.123 Sum_probs=46.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC---hHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE---LLFLKE 207 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge---~~~~~~ 207 (221)
+++|.++......+++-.....+ .+...++..+.. .....|+.+.++|.+.++.-+|+.++..++- ...+.+
T Consensus 114 ~~gd~v~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~---~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~ 188 (420)
T 3gbx_A 114 QPGDTVLGMNLAQGGHLTHGSPV--NFSGKLYNIVPY---GIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAK 188 (420)
T ss_dssp CTTCEEEEEEEC--------------CHHHHSEEEEE---EECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHH
T ss_pred CCCCEEEecchhhcceeccchhh--hhcccceeEEec---cCCccCCcCHHHHHHHHHhcCCeEEEEecCccCCccCHHH
Confidence 37899988877544422110110 011122333210 1223577899999999988788988775543 335778
Q ss_pred HHHHHHhcCC
Q 045468 208 HELLGRSTGI 217 (221)
Q Consensus 208 ~~~~~~~~g~ 217 (221)
.++++++.|+
T Consensus 189 l~~l~~~~~~ 198 (420)
T 3gbx_A 189 MREIADSIGA 198 (420)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 8888888884
No 130
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=37.78 E-value=49 Score=26.99 Aligned_cols=72 Identities=17% Similarity=0.033 Sum_probs=48.7
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc-----CCCEEEEcCCChH--
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV-----KPQHFLPIHGELL-- 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i-----~Pk~iiPVHge~~-- 203 (221)
+++|.|++..+..++ +...+...|.+++ .+ .+-+.++|...++.. +++.++..|..+|
T Consensus 125 ~~gd~v~~~~~~~~~-------~~~~~~~~g~~~~-----~~---~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG 189 (399)
T 3tqx_A 125 GPEDAIISDELNHAS-------IIDGIRLCKAQRY-----RY---KNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDG 189 (399)
T ss_dssp CTTCEEEEETTCCHH-------HHHHHHSCCSEEE-----EE---CTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTT
T ss_pred CCCCEEEECCcccHH-------HHHHHHHcCCcee-----Ee---CCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCC
Confidence 378888877653332 2344566788776 22 246788999999886 6777776664333
Q ss_pred ---HHHHHHHHHHhcCC
Q 045468 204 ---FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ---~~~~~~~~~~~~g~ 217 (221)
.+.+.++++++.|+
T Consensus 190 ~~~~l~~i~~l~~~~~~ 206 (399)
T 3tqx_A 190 IIADLKSICDLADKYNA 206 (399)
T ss_dssp EECCHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHHcCC
Confidence 47888888888874
No 131
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=37.55 E-value=67 Score=27.40 Aligned_cols=80 Identities=9% Similarity=-0.090 Sum_probs=48.9
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC---------
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE--------- 201 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge--------- 201 (221)
+++|.|+++.+.+|.+.. .+...|.+.+......--....-+.+.+.+.++...|+.++-+|.-
T Consensus 135 ~pgd~V~ip~P~w~~y~~-------i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~ 207 (420)
T 4h51_A 135 AETTPIYLSDPTWPNHYG-------VVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDP 207 (420)
T ss_dssp TTTSCEEEEESCCTHHHH-------HHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCC
T ss_pred CCCCEEEEecCCchhHHH-------HHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCC
Confidence 489999999998886644 2445666422000000001222356677777777778777777763
Q ss_pred -hHHHHHHHHHHHhcCC
Q 045468 202 -LLFLKEHELLGRSTGI 217 (221)
Q Consensus 202 -~~~~~~~~~~~~~~g~ 217 (221)
..++.+.++++++.|+
T Consensus 208 ~~~~~~~i~~~~~~~~~ 224 (420)
T 4h51_A 208 SQEQWNEIASLMLAKHH 224 (420)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCc
Confidence 3578888888887764
No 132
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=37.54 E-value=1.6e+02 Score=24.46 Aligned_cols=75 Identities=21% Similarity=0.240 Sum_probs=44.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc-----------CCCEEE--Ec
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV-----------KPQHFL--PI 198 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i-----------~Pk~ii--PV 198 (221)
+||.|+...+ +|-.. .+.+...|++++..+ ....| -+.++|.+.++.. +++.++ |.
T Consensus 131 ~gd~Vlv~~p---~y~~~----~~~~~~~g~~~~~v~---~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~ 199 (425)
T 2r2n_A 131 PGDNVLLDEP---AYSGT----LQSLHPLGCNIINVA---SDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPN 199 (425)
T ss_dssp TTCEEEEESS---CCHHH----HHHHGGGTCEEEEEC---EETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCS
T ss_pred CCCEEEEeCC---CcHHH----HHHHHHcCCEEEEeC---cCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCC
Confidence 7888887664 44332 234556788876321 11112 5678888887632 467654 53
Q ss_pred C----C---ChHHHHHHHHHHHhcCC
Q 045468 199 H----G---ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 199 H----g---e~~~~~~~~~~~~~~g~ 217 (221)
+ | ...++.+.++++++.|+
T Consensus 200 ~~NPtG~~~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 200 GNNPTGNSLTSERKKEIYELARKYDF 225 (425)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred CcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 3 2 12367788889988874
No 133
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=37.28 E-value=1.7e+02 Score=24.59 Aligned_cols=98 Identities=14% Similarity=0.019 Sum_probs=0.0
Q ss_pred CCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecC-
Q 045468 99 PKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGH- 177 (221)
Q Consensus 99 ~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGH- 177 (221)
...-+++++|.+.-....+.-+.. +||.|+...+..+++... +...|++++ .+.....
T Consensus 139 ~~~~v~~t~G~~~al~~~~~~l~~---------~Gd~Vlv~~p~y~~~~~~-------~~~~g~~~~-----~v~~~~~g 197 (448)
T 3aow_A 139 QDNDIMITSGSQQALDLIGRVFLN---------PGDIVVVEAPTYLAALQA-------FNFYEPQYI-----QIPLDDEG 197 (448)
T ss_dssp TTSEEEEESSHHHHHHHHHHHHCC---------TTCEEEEEESCCHHHHHH-------HHTTCCEEE-----EEEEETTE
T ss_pred ChhhEEEeCcHHHHHHHHHHHHcC---------CCCEEEEeCCChHHHHHH-------HHHcCCEEE-----EeccCCCC
Q ss_pred CCHHHHHHHHH----H-cCCCEEEEcCC---------ChHHHHHHHHHHHhcCC
Q 045468 178 GYRGELEEVLK----L-VKPQHFLPIHG---------ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 178 A~~~dL~~~i~----~-i~Pk~iiPVHg---------e~~~~~~~~~~~~~~g~ 217 (221)
-+.++|.+.++ . -+|+.++-+.. ...++.+.++++++.|+
T Consensus 198 ~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~ 251 (448)
T 3aow_A 198 MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 251 (448)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCC
No 134
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=37.19 E-value=59 Score=27.85 Aligned_cols=80 Identities=15% Similarity=0.053 Sum_probs=51.8
Q ss_pred CCCCEEEEEe-cCCCCcHHHHHHHH--------HHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH-cCCCEEEEcC-
Q 045468 131 TNEDVILYSA-KVIPGNESRVMKML--------NRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL-VKPQHFLPIH- 199 (221)
Q Consensus 131 ~~~~~vI~s~-~~~pg~e~~~~~~~--------~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~-i~Pk~iiPVH- 199 (221)
++||.++.+. ...+++.. +. ..+...|+++...+ ....|..+.++|++.++. -+|+.++-.+
T Consensus 113 ~pGD~Vl~~~~~~y~~~~~----~~g~~~~~~~~~l~~~G~~~~~v~---~~~~g~~D~e~l~~~l~~~~~tklV~i~~s 185 (427)
T 3i16_A 113 RPGNTMLSVCGEPYDTLHD----VIGITENSNMGSLKEFGINYKQVD---LKEDGKPNLEEIEKVLKEDESITLVHIQRS 185 (427)
T ss_dssp CTTCEEEESSSSCCGGGHH----HHTCSCCCSSCCTGGGTCEEEECC---CCTTSSCCHHHHHHHHHTCTTEEEEEEECS
T ss_pred CCCCEEEEeCCCccHHHHH----HHhccccchHHHHHHcCCEEEEec---CccCCCcCHHHHHHHhhCCCCCEEEEEEcC
Confidence 4899988876 43333322 12 34566788776322 112477889999988875 3677777655
Q ss_pred --------CChHHHHHHHHHHHh--cCC
Q 045468 200 --------GELLFLKEHELLGRS--TGI 217 (221)
Q Consensus 200 --------ge~~~~~~~~~~~~~--~g~ 217 (221)
|.-.++.+.+++|++ .|+
T Consensus 186 ~~~p~nptg~i~dl~~i~~la~~~~~g~ 213 (427)
T 3i16_A 186 TGYGWRRALLIEDIKSIVDCVKNIRKDI 213 (427)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCcccHHHHHHHHHHHHHhCCCC
Confidence 133588899999998 663
No 135
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=37.14 E-value=97 Score=24.94 Aligned_cols=78 Identities=13% Similarity=-0.023 Sum_probs=45.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC-----ChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG-----ELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-----e~~~~ 205 (221)
+++|.+|......++. .........|+++...+ ....+.-+.++|.+.+. -+++.++..|- -...+
T Consensus 93 ~~gd~vi~~~~~~~~~-----~~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l 163 (376)
T 3f0h_A 93 TKKDKVLVIDGGSFGH-----RFVQLCEIHEIPYVALK---LEHGKKLTKEKLYEYDN-QNFTGLLVNVDETSTAVLYDT 163 (376)
T ss_dssp CTTCCEEEEESSHHHH-----HHHHHHHHTTCCEEEEE---CCTTCCCCHHHHHTTTT-SCCCEEEEESEETTTTEECCH
T ss_pred CCCCeEEEEeCChhhH-----HHHHHHHHcCCceEEEe---CCCCCCCCHHHHHHhhc-cCceEEEEecccCCcceecCH
Confidence 3788888876432221 12244556687765211 11235567777776432 25678888743 22248
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 164 ~~i~~l~~~~~~ 175 (376)
T 3f0h_A 164 MMIGEFCKKNNM 175 (376)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 888888988874
No 136
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=37.09 E-value=24 Score=31.43 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=28.4
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
..+..|.+.|+++. ++.|| |.+.+++.+.++.++
T Consensus 62 e~l~~Li~aGmnv~-----RlNfS-HG~~e~h~~~i~~iR 95 (520)
T 3khd_A 62 ETLVKLIDAGMDIC-----RFNFS-HGSHEDHKEMFNNVL 95 (520)
T ss_dssp HHHHHHHHHTEEEE-----EEETT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 34577888999998 89887 999999999887763
No 137
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=36.84 E-value=53 Score=26.88 Aligned_cols=27 Identities=30% Similarity=0.165 Sum_probs=24.3
Q ss_pred ecCCCHH---HHHHHHHHcCCCEEEEcCCC
Q 045468 175 SGHGYRG---ELEEVLKLVKPQHFLPIHGE 201 (221)
Q Consensus 175 SGHA~~~---dL~~~i~~i~Pk~iiPVHge 201 (221)
-||.+.+ +-.++++.++||.+|++|=.
T Consensus 244 ~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s 273 (321)
T 3jxp_A 244 MGHLAQNGPGGTLEVLDGFPRQRKVLIHIN 273 (321)
T ss_dssp CCCCCSSSTTCHHHHHTTCSSSEEEEESBC
T ss_pred CcccCCCCHHHHHHHHHhCCCCeEEEEEeC
Confidence 4899888 99999999999999999963
No 138
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=36.74 E-value=1.6e+02 Score=23.77 Aligned_cols=67 Identities=7% Similarity=-0.070 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCCCC
Q 045468 150 VMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGIRH 219 (221)
Q Consensus 150 ~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~~~ 219 (221)
...+...+.+.|++++. ...+-.|-.+......=++..+|+.|+.+....+....+.+.+++.|++.
T Consensus 156 ~~~~~~~~~~~g~~vv~---~~~~~~~~~d~~~~l~~i~~~~pd~v~~~~~~~~~~~~~~~~~~~~g~~~ 222 (371)
T 4f06_A 156 ETAFKKTFEAEGGKVVE---AVRMPLSTTDFGPIMQRIKNSGADMIFTFLPAGPPTLGFVKAYIDNGLKA 222 (371)
T ss_dssp HHHHHHHHHHTTCEEEE---EEEECTTCCCCHHHHHHHHHHTCSEEEEECCTTHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHhcCCceEE---EEecCcccccHHHHHHHHHhcCCCEEEEEeccCchhhHHHHHHHHhhhhc
Confidence 34577888899999873 23344566666666666677799999887776678888888888888753
No 139
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=36.72 E-value=27 Score=29.45 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=45.6
Q ss_pred cCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee-ecCCCHHHHHHHHHHcCCCEEEEcC--CChHHHH
Q 045468 130 LTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT-SGHGYRGELEEVLKLVKPQHFLPIH--GELLFLK 206 (221)
Q Consensus 130 ~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~-SGHA~~~dL~~~i~~i~Pk~iiPVH--ge~~~~~ 206 (221)
++++|.|+.+....+++.. .+...|++++..+ ... .|.-+.++|.+.+.. +++.++.+| |....+.
T Consensus 107 ~~~gd~Vi~~~~~~~~~~~-------~~~~~g~~~~~v~---~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~g~~~~~~ 175 (437)
T 3bb8_A 107 LKPGDEVITVAAGFPTTVN-------PTIQNGLIPVFVD---VDIPTYNVNASLIEAAVSD-KTKAIMIAHTLGNLFDLA 175 (437)
T ss_dssp CCTTCEEEECSSSCHHHHH-------HHHHTTCEEEECC---EETTTTEECGGGHHHHCCT-TEEEEEEECGGGCCCCHH
T ss_pred CCCcCEEEECCCCcHHHHH-------HHHHcCCEEEEEe---ccCccCCcCHHHHHHhcCC-CCeEEEEeCCCCChhcHH
Confidence 3478888887764444332 2234788776211 111 244466777665532 456777766 5455778
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 176 ~i~~l~~~~~~ 186 (437)
T 3bb8_A 176 EVRRVADKYNL 186 (437)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 88888888774
No 140
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=35.07 E-value=36 Score=27.90 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CCEEEEcCC--ChHHHHHHHHHHHhcCCC
Q 045468 148 SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQHFLPIHG--ELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 148 ~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk~iiPVHg--e~~~~~~~~~~~~~~g~~ 218 (221)
....++...+.+.|++.+. ...+.|-+.|++..++++.++ |..-|=+|+ ..-...+++-.|.+.|..
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~----l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~ 228 (307)
T 1ydo_A 157 EQVIRLSEALFEFGISELS----LGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGIT 228 (307)
T ss_dssp HHHHHHHHHHHHHTCSCEE----EECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhcCCCEEE----EcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 3466677888899997662 567899999999999999985 334466677 666778888888888874
No 141
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=35.07 E-value=1.4e+02 Score=24.41 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=45.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCE-EEEcC-----C-ChHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQH-FLPIH-----G-ELLF 204 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~-iiPVH-----g-e~~~ 204 (221)
+||.|+......++.-... +.+...|++++ .+ .+.++|.+. .-+++. ++..| | ...+
T Consensus 97 ~gd~Vl~~~~~y~~~~~~~----~~~~~~g~~~~-----~v-----~d~~~l~~~--~~~~~~~v~~~~p~nptG~~~~~ 160 (374)
T 2aeu_A 97 KPKKVIHYLPELPGHPSIE----RSCKIVNAKYF-----ES-----DKVGEILNK--IDKDTLVIITGSTMDLKVIELEN 160 (374)
T ss_dssp CCSEEEEECSSSSCCTHHH----HHHHHTTCEEE-----EE-----SCHHHHHTT--CCTTEEEEEECBCTTSCBCCHHH
T ss_pred CCCEEEEecCCCCccHHHH----HHHHHcCcEEE-----Ee-----CCHHHHHhc--CCCccEEEEEccCCCCCCCCccc
Confidence 6788888887666643322 24556788876 33 367777665 224566 55444 3 4678
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 161 l~~i~~l~~~~~~ 173 (374)
T 2aeu_A 161 FKKVINTAKNKEA 173 (374)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 8888899998875
No 142
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=34.79 E-value=90 Score=25.85 Aligned_cols=46 Identities=9% Similarity=-0.109 Sum_probs=29.9
Q ss_pred HHHHHHHHhcCCcEEEEeccc-------cHHHHHHHHHHHHHcCCeEEEEccc
Q 045468 22 DALMRHVSAAKGRVITTQFAS-------NIHRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 22 ~~i~~~~~~~~g~viv~~~a~-------ni~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
+.+.+.+++.+-++++-+... ..+++..|.++|++.|-.+++|...
T Consensus 172 ~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~ 224 (437)
T 3g0t_A 172 EKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAY 224 (437)
T ss_dssp HHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcch
Confidence 445555533333444434333 3678999999999999988888644
No 143
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=34.77 E-value=71 Score=26.82 Aligned_cols=73 Identities=5% Similarity=0.004 Sum_probs=42.9
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHH-HHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEEE--cC---CCh
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNR-ISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFLP--IH---GEL 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~-l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~iiP--VH---ge~ 202 (221)
+++|.||.+... |-.....+... +.+.|+++. .+.. .+.++| -+.++| +.++- ++ |..
T Consensus 103 ~~gd~Vi~~~~~---y~~~~~~~~~~~~~~~g~~~~-----~v~~---~d~~~l---~~~i~~~~~~v~~e~~~np~G~~ 168 (400)
T 3nmy_A 103 DAGSHVVAMDDL---YGGTFRLFERVRRRTAGLDFS-----FVDL---TDPAAF---KAAIRADTKMVWIETPTNPMLKL 168 (400)
T ss_dssp CTTCEEEEESSC---CHHHHHHHHHTHHHHHCCEEE-----EECT---TSHHHH---HHHCCTTEEEEEEESSCTTTCCC
T ss_pred CCCCEEEEeCCC---chHHHHHHHHhhHhhcCeEEE-----EECC---CCHHHH---HHHhccCCCEEEEECCCCCCCee
Confidence 478888877653 33222233344 667798776 2221 244444 455544 44442 34 455
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 169 ~~l~~i~~la~~~g~ 183 (400)
T 3nmy_A 169 VDIAAIAVIARKHGL 183 (400)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred ecHHHHHHHHHHcCC
Confidence 578899999999885
No 144
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=34.73 E-value=25 Score=30.83 Aligned_cols=81 Identities=12% Similarity=-0.001 Sum_probs=46.7
Q ss_pred CCEEEEEecCCC-----CcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH--------HcCCCEEEEcC
Q 045468 133 EDVILYSAKVIP-----GNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK--------LVKPQHFLPIH 199 (221)
Q Consensus 133 ~~~vI~s~~~~p-----g~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~--------~i~Pk~iiPVH 199 (221)
++.+|+-.+.+. |.=.....-++-|..+|+..++..-..-+.|++...-+...+.. .+.|++
T Consensus 4 ~~~v~~q~F~W~~~~~gG~~~gi~~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~----- 78 (515)
T 1hvx_A 4 FNGTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKY----- 78 (515)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSS-----
T ss_pred CCceEEEEEEccCCCCCCcHHHHHHHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCC-----
Confidence 344666666543 32223333358999999988854321223333222222222222 255654
Q ss_pred CChHHHHHHHHHHHhcCCC
Q 045468 200 GELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 200 ge~~~~~~~~~~~~~~g~~ 218 (221)
|...++.++++.|++.|+.
T Consensus 79 Gt~~dfk~Lv~~aH~~Gi~ 97 (515)
T 1hvx_A 79 GTKAQYLQAIQAAHAAGMQ 97 (515)
T ss_dssp CCHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHCCCE
Confidence 8889999999999999963
No 145
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=34.35 E-value=1.3e+02 Score=25.31 Aligned_cols=98 Identities=10% Similarity=-0.040 Sum_probs=54.2
Q ss_pred EEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee-ecCCCHH
Q 045468 103 LIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT-SGHGYRG 181 (221)
Q Consensus 103 vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~-SGHA~~~ 181 (221)
++++.|.++-....+.-+.. +.+ |.|++..+.++++. ..+...|.+++..+. ..- ...-+.+
T Consensus 100 i~~t~G~~~al~~~~~~l~~-------~~~-d~Vlv~~P~y~~~~-------~~~~~~g~~~~~v~~--~~~~~~~~d~~ 162 (405)
T 3k7y_A 100 TIQCIGGTGAIFVLLEFLKM-------LNV-ETLYVTNPPYINHV-------NMIESRGFNLKYINF--FDYNLIDINYD 162 (405)
T ss_dssp EEEEEHHHHHHHHHHHHHHT-------TTC-CEEEEESSCCHHHH-------HHHHTTTCEEEEECC--EETTTTEECHH
T ss_pred EEEcCchHHHHHHHHHHHHh-------cCC-CEEEEeCCCCHhHH-------HHHHHcCCeEEEEec--cccccCCcCHH
Confidence 56666765433322222221 226 89888876555443 335567888772111 000 1234667
Q ss_pred HHHHHHHHcCCCEEEEcCC----------ChHHHHHHHHHHHhcCC
Q 045468 182 ELEEVLKLVKPQHFLPIHG----------ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 182 dL~~~i~~i~Pk~iiPVHg----------e~~~~~~~~~~~~~~g~ 217 (221)
+|.+.+....++.+|-++. ...++.+.++++++.|+
T Consensus 163 ~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~ 208 (405)
T 3k7y_A 163 LFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKH 208 (405)
T ss_dssp HHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCe
Confidence 7777776644444555543 24578888888887764
No 146
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=34.25 E-value=1.8e+02 Score=24.42 Aligned_cols=81 Identities=6% Similarity=-0.065 Sum_probs=45.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee--ecCCCHHHHHHHHHHcCCCEEEEc----CC-----
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT--SGHGYRGELEEVLKLVKPQHFLPI----HG----- 200 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~--SGHA~~~dL~~~i~~i~Pk~iiPV----Hg----- 200 (221)
++|.|+.+.+.++++... +...+...|++++..+. ... .+.-+.++|++.++...++..+-+ |.
T Consensus 144 ~gd~Vlv~~p~~~~~~~~---~~~~~~~~G~~v~~~~~--~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~ 218 (448)
T 3meb_A 144 PKAEFYMPSTTWPNHYGI---YDKVFNKLKVPYKEYTY--LRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGID 218 (448)
T ss_dssp TTCCEEEESSCCTHHHHH---HHHHHCTTTSCCEEECC--BCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCC
T ss_pred CCCEEEECCCCCHhHHHH---HHhhHHhCCCeEEEEec--cccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcC
Confidence 788888887655543222 11112266876652110 011 245578888888876544333333 21
Q ss_pred -ChHHHHHHHHHHHhcCC
Q 045468 201 -ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 201 -e~~~~~~~~~~~~~~g~ 217 (221)
...++.+.++++++.|+
T Consensus 219 ~~~~~l~~i~~l~~~~~~ 236 (448)
T 3meb_A 219 FTEAQWKELLPIMKEKKH 236 (448)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCCC
Confidence 23467888889988874
No 147
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=34.25 E-value=1e+02 Score=25.19 Aligned_cols=72 Identities=19% Similarity=0.109 Sum_probs=46.7
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc-----CCCEEEEcC-----C
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV-----KPQHFLPIH-----G 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i-----~Pk~iiPVH-----g 200 (221)
+++|.|++..+ .+.. ....+...|++++ .+ .+.+.++|.+.++.. +++.++..| |
T Consensus 127 ~~gd~v~~~~~---~~~~----~~~~~~~~g~~~~-----~~---~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG 191 (401)
T 1fc4_A 127 GAEDAIISDAL---NHAS----IIDGVRLCKAKRY-----RY---ANNDMQELEARLKEAREAGARHVLIATDGVFSMDG 191 (401)
T ss_dssp CTTCEEEEETT---CCHH----HHHHHHTSCSEEE-----EE---CTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTT
T ss_pred CCCCEEEEcch---hHHH----HHHHHHHcCCceE-----EE---CCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCC
Confidence 37888777654 3322 2234667788776 22 246789999988875 677766655 3
Q ss_pred ChHHHHHHHHHHHhcCC
Q 045468 201 ELLFLKEHELLGRSTGI 217 (221)
Q Consensus 201 e~~~~~~~~~~~~~~g~ 217 (221)
....+.+.++++++.|+
T Consensus 192 ~~~~~~~i~~l~~~~~~ 208 (401)
T 1fc4_A 192 VIANLKGVCDLADKYDA 208 (401)
T ss_dssp EECCHHHHHHHHHHTTE
T ss_pred CCCCHHHHHHHHHHcCC
Confidence 33347888888888773
No 148
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=34.24 E-value=1.5e+02 Score=24.53 Aligned_cols=74 Identities=19% Similarity=0.199 Sum_probs=46.2
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHH-HcCCeEEecCCceeeee--c--CCCHHHHHHHHHHc-----CCCEEEEc--C
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRIS-EIGSTIVMGRNEGLHTS--G--HGYRGELEEVLKLV-----KPQHFLPI--H 199 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~-~~g~~v~~~~~~~~h~S--G--HA~~~dL~~~i~~i-----~Pk~iiPV--H 199 (221)
++|.|+...+..+++.. .+. ..|++++ .+... + .-+.++|++.++.. +|+.++-. |
T Consensus 134 ~gd~vl~~~p~~~~~~~-------~~~~~~g~~~~-----~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~ 201 (435)
T 3piu_A 134 PGEAVLIPTPYYPGFDR-------DLKWRTGVEIV-----PIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 201 (435)
T ss_dssp TTCEEEEEESCCTTHHH-------HTTTTTCCEEE-----EEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSC
T ss_pred CCCeEEECCCccccHHH-------HHHHhcCCEEE-----EeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCC
Confidence 78898888776555432 222 4688776 22221 1 24788999888773 66766533 3
Q ss_pred CC------hHHHHHHHHHHHhcCC
Q 045468 200 GE------LLFLKEHELLGRSTGI 217 (221)
Q Consensus 200 ge------~~~~~~~~~~~~~~g~ 217 (221)
.. ..++.+.++++++.|+
T Consensus 202 nptG~~~~~~~l~~l~~~~~~~~~ 225 (435)
T 3piu_A 202 NPLGTTMTRNELYLLLSFVEDKGI 225 (435)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCC
Confidence 21 2467888888888774
No 149
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=34.06 E-value=28 Score=30.86 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=28.5
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
..+..|.+.|+++. ++.+| |.+.++++++++.++
T Consensus 52 e~l~~li~aGm~v~-----RlNfS-Hg~~e~h~~~i~~iR 85 (511)
T 3gg8_A 52 DTLVKMIDAGMNVC-----RLNFS-HGDHETHARTVQNIQ 85 (511)
T ss_dssp HHHHHHHHHTEEEE-----EEETT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 34677888999998 88887 999999999988774
No 150
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.70 E-value=63 Score=26.24 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCe
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRK 60 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~ 60 (221)
+.|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=.
T Consensus 53 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 101 (300)
T 3eb2_A 53 YLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGAD 101 (300)
T ss_dssp GCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCS
T ss_pred ccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 45666655555555554455 489999999999999999999999873
No 151
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=33.50 E-value=1.9e+02 Score=23.28 Aligned_cols=75 Identities=8% Similarity=-0.077 Sum_probs=44.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~~ 206 (221)
++|.|+...+..+++. ..+...|++++..+ ....+..+.++|.+.++.-+|+.++-.| |......
T Consensus 115 ~gd~Vl~~~~~y~~~~-------~~~~~~g~~~~~v~---~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 115 PGRTALGFQPSYSMHP-------ILAKGTHTEFIAVS---RGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp TTCEEEEEESSCTHHH-------HHHHHTTCEEEEEE---CCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred CCCEEEEcCCChHHHH-------HHHHHcCCEEEEec---CCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 7888888876555432 23456788776211 1111245778888887765788776544 3333455
Q ss_pred HHHHHHHhcC
Q 045468 207 EHELLGRSTG 216 (221)
Q Consensus 207 ~~~~~~~~~g 216 (221)
...++++.++
T Consensus 185 ~l~~l~~~~~ 194 (369)
T 3cq5_A 185 DVERIINVAP 194 (369)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHhCC
Confidence 6666666655
No 152
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=33.46 E-value=65 Score=21.67 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=27.5
Q ss_pred EEEEeccccHHHHHHHHHHHHHcCCeEEEEcc
Q 045468 35 VITTQFASNIHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 35 viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
|+|.+|++|=+.+..+-++.++.|.++--.-.
T Consensus 3 ivivvfstdeetlrkfkdiikkngfkvrtvrs 34 (134)
T 2l69_A 3 IVIVVFSTDEETLRKFKDIIKKNGFKVRTVRS 34 (134)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEEEeCCHHHHHHHHHHHHhcCceEEEecC
Confidence 67888999999999999999999997765533
No 153
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=33.26 E-value=68 Score=26.95 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=41.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCcee-eeecCCCHHHHHHHHHHcCCCEEEEcCC-----ChHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGL-HTSGHGYRGELEEVLKLVKPQHFLPIHG-----ELLF 204 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~-h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-----e~~~ 204 (221)
+++|.||.+....+++.. .+...+...|+++.. + .. .+.++|++.++. +++.++.-|- ....
T Consensus 95 ~~gd~vi~~~~~~~~~~~---~~~~~~~~~g~~~~~-----~~~~---~d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~ 162 (421)
T 2ctz_A 95 QAGDNIVSTPNLYGGTFN---QFKVTLKRLGIEVRF-----TSRE---ERPEEFLALTDE-KTRAWWVESIGNPALNIPD 162 (421)
T ss_dssp CTTCEEEECSCCCHHHHH---HHHTHHHHTTCEEEE-----CCTT---CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCC
T ss_pred CCCCEEEEeCCCchHHHH---HHHHHHHHcCCEEEE-----ECCC---CCHHHHHHhhcc-CCeEEEEECCCCCCCcccC
Confidence 378888777654333222 222335678988762 2 11 244555444322 3455554443 2346
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 163 l~~i~~~a~~~g~ 175 (421)
T 2ctz_A 163 LEALAQAAREKGV 175 (421)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 8888899998885
No 154
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=33.16 E-value=1.4e+02 Score=24.33 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=39.7
Q ss_pred CC-CEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------
Q 045468 132 NE-DVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-------- 202 (221)
Q Consensus 132 ~~-~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-------- 202 (221)
++ |.|+...+..+++. +.+...|++++..+.+. -....+.++|.+.++. +++.++-.+-.+
T Consensus 122 ~g~d~vl~~~p~~~~~~-------~~~~~~g~~~~~v~~~~--~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~ 191 (398)
T 3ele_A 122 DAYDEFITIAPYFPEYK-------VFVNAAGARLVEVPADT--EHFQIDFDALEERINA-HTRGVIINSPNNPSGTVYSE 191 (398)
T ss_dssp STTCEEEEESSCCTHHH-------HHHHHTTCEEEEECCCT--TTSSCCHHHHHHTCCT-TEEEEEECSSCTTTCCCCCH
T ss_pred CCCCEEEEeCCCchhhH-------HHHHHcCCEEEEEecCC--cCCcCCHHHHHHHhCc-CCCEEEEcCCCCCCCCCCCH
Confidence 78 88887776444332 34456788877321100 0124466666655432 445555434332
Q ss_pred HHHHHHHHHHHh
Q 045468 203 LFLKEHELLGRS 214 (221)
Q Consensus 203 ~~~~~~~~~~~~ 214 (221)
.++.+.++++++
T Consensus 192 ~~l~~l~~~~~~ 203 (398)
T 3ele_A 192 ETIKKLSDLLEK 203 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 247777788877
No 155
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=32.63 E-value=91 Score=25.16 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=41.5
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeec-CCCHHHHHHHHHHcC--CCEEEEcC-----CCh
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSG-HGYRGELEEVLKLVK--PQHFLPIH-----GEL 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SG-HA~~~dL~~~i~~i~--Pk~iiPVH-----ge~ 202 (221)
+++|.|+......+++.. .+.......|++++. +...- +...-|+..+-+.++ ++.++..| |..
T Consensus 99 ~~gd~vl~~~~~~~~~~~---~~~~~~~~~g~~~~~-----v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 170 (390)
T 1elu_A 99 HQGDEILLTDCEHPGIIA---IVQAIAARFGITYRF-----FPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTGQV 170 (390)
T ss_dssp CTTCEEEEETTCCHHHHH---HHHHHHHHHCCEEEE-----ECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTCCB
T ss_pred CCCCEEEEecCcccHHHH---HHHHHHHHhCcEEEE-----EcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCcee
Confidence 478888877654333322 222333456887762 22110 112234444445554 45666555 333
Q ss_pred HHHHHHHHHHH----hcCC
Q 045468 203 LFLKEHELLGR----STGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~----~~g~ 217 (221)
..+.+.+++++ +.|+
T Consensus 171 ~~~~~i~~l~~~~~~~~~~ 189 (390)
T 1elu_A 171 LPLAEIMAVCRRHQGNYPV 189 (390)
T ss_dssp CCHHHHHHHHHHCCSSSCC
T ss_pred cCHHHHHHHHhhhhhhcCc
Confidence 35778888888 7764
No 156
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=32.55 E-value=46 Score=24.12 Aligned_cols=81 Identities=11% Similarity=-0.001 Sum_probs=43.8
Q ss_pred ccCCCCEEEEEecCCCCcHHHHHHHHHHHHHc---CCeEEecCCceeeeecCCC-HHHHHHHHHHcCCCEE---EEcCCC
Q 045468 129 KLTNEDVILYSAKVIPGNESRVMKMLNRISEI---GSTIVMGRNEGLHTSGHGY-RGELEEVLKLVKPQHF---LPIHGE 201 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~---g~~v~~~~~~~~h~SGHA~-~~dL~~~i~~i~Pk~i---iPVHge 201 (221)
++..-|.+|+.++.+.|..+. .+.++|.+. |-.++ .+-++|-.. ..-++.+-+.+.=-.+ +-++|.
T Consensus 75 ~l~~yd~iilG~P~~~g~~~~--~~~~fl~~~~l~gk~v~-----~f~t~g~~~~g~~~~~l~~~l~~~~~~~g~~~~g~ 147 (162)
T 3klb_A 75 HPEKYEVLFVGFPVWWYIAPT--IINTFLESYDFAGKIVV-----PFATSGGSGIGNCEKNLHKAYPDIVWKDGKLLNGQ 147 (162)
T ss_dssp CGGGCSEEEEEEECBTTBCCH--HHHHHHHTSCCTTCEEE-----EEEECSSCCSHHHHHHHHHHCTTSEECCCEECCSC
T ss_pred ChhhCCEEEEEcccccCCCCH--HHHHHHHhcCCCCCEEE-----EEEEeCCCCccHHHHHHHHHcCCCEeecceEEeCC
Confidence 355788999999987775432 344455543 33444 566667644 3334444444421122 234442
Q ss_pred hHHHHHHHHHHHhcCC
Q 045468 202 LLFLKEHELLGRSTGI 217 (221)
Q Consensus 202 ~~~~~~~~~~~~~~g~ 217 (221)
+...+..+++++.|.
T Consensus 148 -~~~~~v~~W~~~~~~ 162 (162)
T 3klb_A 148 -ITRDLVTEWFEKIRL 162 (162)
T ss_dssp -CCHHHHHHHHHHTTC
T ss_pred -CCHHHHHHHHHHhCC
Confidence 234556678877763
No 157
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=32.35 E-value=91 Score=25.02 Aligned_cols=48 Identities=21% Similarity=0.080 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEE
Q 045468 14 TTSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLV 62 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~v 62 (221)
+.|.+|=.+-++.+++..+| |++.+.+.+.....++.+.|++.|=.-+
T Consensus 47 ~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gadav 94 (286)
T 2r91_A 47 ALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAEAV 94 (286)
T ss_dssp GSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred hCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCCEE
Confidence 45666666666666666667 9999999999999999999999987433
No 158
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=32.35 E-value=34 Score=31.06 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=28.9
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
.++..|.+.|+++. ++.|| |.+.+++.++++.++
T Consensus 39 e~l~~li~aGm~v~-----RlNfS-Hg~~e~h~~~i~~iR 72 (606)
T 3t05_A 39 EMIEKLINAGMNVA-----RLNFS-HGSHEEHKGRIDTIR 72 (606)
T ss_dssp HHHHHHHHTTEEEE-----EEETT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 45678888999998 88887 999999999998774
No 159
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=32.26 E-value=73 Score=26.34 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CCEEEEcCC--ChHHHHHHHHHHHhcCCC
Q 045468 149 RVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQHFLPIHG--ELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 149 ~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk~iiPVHg--e~~~~~~~~~~~~~~g~~ 218 (221)
....+...+.+.|++.+. ...+.|-+.|++..++++.++ |..-|=+|+ ..-...+++-.|.+.|..
T Consensus 170 ~~~~~~~~~~~~Ga~~i~----l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~ 240 (337)
T 3ble_A 170 YVKSLVEHLSKEHIERIF----LPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVK 240 (337)
T ss_dssp HHHHHHHHHHTSCCSEEE----EECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCEEE----EecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCC
Confidence 456677888899997772 567899999999999999884 554555565 566778888888888964
No 160
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=32.17 E-value=60 Score=27.93 Aligned_cols=55 Identities=13% Similarity=0.018 Sum_probs=41.0
Q ss_pred cCCeEEecCCceeeeecCCCHHHHHHHHHHcC-----CCEEEEcCCChH-----HHHHHHHHHHhcCC
Q 045468 160 IGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK-----PQHFLPIHGELL-----FLKEHELLGRSTGI 217 (221)
Q Consensus 160 ~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~-----Pk~iiPVHge~~-----~~~~~~~~~~~~g~ 217 (221)
.|++++..+ ....|+-+.++|++.++.-. |..++..||... .+.+.++++++.|+
T Consensus 208 ~g~~~~~v~---~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~ 272 (481)
T 4e1o_A 208 SLVKMKFLP---VDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGL 272 (481)
T ss_dssp HTCEEEEEC---CCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC
T ss_pred CCCceEEEE---cCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCC
Confidence 577665322 22367889999999997642 788888887765 78899999998875
No 161
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=32.10 E-value=78 Score=26.17 Aligned_cols=73 Identities=15% Similarity=0.203 Sum_probs=42.3
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEE---Ec--CCChH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFL---PI--HGELL 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~ii---PV--Hge~~ 203 (221)
+++|.|+.+....++ ....+...+...|+++. .+.. . |+..+-+.+++ +.++ |. -|...
T Consensus 96 ~~gd~vl~~~~~y~~---~~~~~~~~~~~~g~~~~-----~v~~---~---d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 161 (389)
T 3acz_A 96 QKGDHLIAGDTLYGC---TVSLFTHWLPRFGIEVD-----LIDT---S---DVEKVKAAWKPNTKMVYLESPANPTCKVS 161 (389)
T ss_dssp CTTCEEEEESSCCHH---HHHHHHHHHHHTTCEEE-----EECT---T---CHHHHHHTCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEeCCCchH---HHHHHHHHHHHcCCEEE-----EECC---C---CHHHHHHhcCCCCeEEEEECCCCCCCeec
Confidence 478888877753333 22233344667898876 2221 2 44445555554 4555 22 14455
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
.+.+.++++++.|+
T Consensus 162 ~l~~i~~~~~~~~~ 175 (389)
T 3acz_A 162 DIKGIAVVCHERGA 175 (389)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCC
Confidence 78888889988874
No 162
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=32.04 E-value=24 Score=30.58 Aligned_cols=81 Identities=12% Similarity=-0.011 Sum_probs=45.5
Q ss_pred CCEEEEEecCCC-----CcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH--------HcCCCEEEEcC
Q 045468 133 EDVILYSAKVIP-----GNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK--------LVKPQHFLPIH 199 (221)
Q Consensus 133 ~~~vI~s~~~~p-----g~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~--------~i~Pk~iiPVH 199 (221)
.+.+|+..+++. |.=.....-++.|..+|+..++..-..-+.|++...-+...+.. .+.|+ -
T Consensus 5 ~~~vi~q~f~w~~~~~gG~~~gi~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~-----~ 79 (485)
T 1wpc_A 5 TNGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTK-----Y 79 (485)
T ss_dssp CCCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCS-----S
T ss_pred CCceEEEEEecCCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCC-----C
Confidence 345666666543 33233333458999999988854321222233222222222221 25555 4
Q ss_pred CChHHHHHHHHHHHhcCCC
Q 045468 200 GELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 200 ge~~~~~~~~~~~~~~g~~ 218 (221)
|...++.++++.|++.|+.
T Consensus 80 Gt~~df~~Lv~~aH~~Gi~ 98 (485)
T 1wpc_A 80 GTRSQLQAAVTSLKNNGIQ 98 (485)
T ss_dssp CCHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHCCCE
Confidence 8888999999999998863
No 163
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=31.70 E-value=1.7e+02 Score=24.01 Aligned_cols=75 Identities=8% Similarity=-0.103 Sum_probs=45.6
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeec-CCCHHHHHHHHHHcCCCEEEEcCCChH-------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSG-HGYRGELEEVLKLVKPQHFLPIHGELL------- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SG-HA~~~dL~~~i~~i~Pk~iiPVHge~~------- 203 (221)
++|.|+...+..+++.. .+...|++++..+. ...| ..+.++|.+.++ -+++.++-.+-.+|
T Consensus 132 ~gd~Vl~~~p~y~~~~~-------~~~~~g~~~~~v~~---~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~ 200 (404)
T 2o1b_A 132 PGDYVLLPDPGYTDYLA-------GVLLADGKPVPLNL---EPPHYLPDWSKVDSQII-DKTKLIYLTYPNNPTGSTATK 200 (404)
T ss_dssp TTCEEEEEESCCSSHHH-------HHHHTTCEEEEEEC---CTTTCCCCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCH
T ss_pred CCCEEEEcCCCchhHHH-------HHHHCCCEEEEecc---CcccCcCCHHHHHHhhc-cCceEEEEcCCCCCCCccCCH
Confidence 78888888776666443 23456887762111 0112 246777877764 25666665543332
Q ss_pred -HHHHHHHHHHhcCC
Q 045468 204 -FLKEHELLGRSTGI 217 (221)
Q Consensus 204 -~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 201 ~~l~~l~~~~~~~~~ 215 (404)
T 2o1b_A 201 EVFDEAIAKFKGTDT 215 (404)
T ss_dssp HHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHcCC
Confidence 67888888888874
No 164
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=31.33 E-value=1e+02 Score=25.22 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=44.9
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CCEEEEcC-----CChH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQHFLPIH-----GELL 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk~iiPVH-----ge~~ 203 (221)
++|.|+......+++. +-+...|++++ .+. +-+.++|.++++..+ ++.++..| |...
T Consensus 131 ~gd~Vl~~~~~~~~~~-------~~~~~~g~~~~-----~v~---~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~ 195 (401)
T 2bwn_A 131 PGLIIYSDSLNHASMI-------EGIKRNAGPKR-----IFR---HNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFG 195 (401)
T ss_dssp TTCEEEEETTCCHHHH-------HHHHHSCCCEE-----EEC---TTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBC
T ss_pred CCCEEEECchhhHHHH-------HHHHHcCCeEE-----EEc---CCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcC
Confidence 6788777764332222 22345788775 222 237899999998764 45666555 4344
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
.+.+.++++++.|+
T Consensus 196 ~l~~i~~l~~~~~~ 209 (401)
T 2bwn_A 196 PIKEICDIAEEFGA 209 (401)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCC
Confidence 57888888988874
No 165
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=31.18 E-value=2e+02 Score=22.81 Aligned_cols=60 Identities=7% Similarity=-0.066 Sum_probs=37.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH-cCCCEEEEcCC
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL-VKPQHFLPIHG 200 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~-i~Pk~iiPVHg 200 (221)
+++|.|+...+..+++ .+.+...|++++..+. ...+..+.++|.+.++. -+++.++-.|-
T Consensus 90 ~~gd~vl~~~~~~~~~-------~~~~~~~g~~~~~~~~---~~~~~~d~~~l~~~l~~~~~~~~v~l~~p 150 (354)
T 3ly1_A 90 SLEAQLVIPELTYGDG-------EHFAKIAGMKVTKVKM---LDNWAFDIEGLKAAVAAYSGPSIVYLVNP 150 (354)
T ss_dssp CTTCEEEEESSSCTHH-------HHHHHHTTCEEEEECC---CTTSCCCHHHHHHHHHTCSSCEEEEEESS
T ss_pred CCCCeEEECCCCchHH-------HHHHHHcCCEEEEecC---CCCCCCCHHHHHHHhccCCCCCEEEEeCC
Confidence 3788888777544432 2344567887763221 11356688888888875 46777764443
No 166
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=31.10 E-value=21 Score=26.71 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=38.1
Q ss_pred ccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee-cCCCH--HHHHHHHHHcCCCEEEEcCC
Q 045468 129 KLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS-GHGYR--GELEEVLKLVKPQHFLPIHG 200 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S-GHA~~--~dL~~~i~~i~Pk~iiPVHg 200 (221)
+++++|+++.-|. .|..+....+...+.+.|++++ .-+| -|... ..|.+++ .--|+-++|.=+
T Consensus 74 ~i~~~D~vii~S~--Sg~n~~~ie~A~~ake~G~~vI------aITs~~~~~~~~~~L~d~a-n~~p~gll~~e~ 139 (170)
T 3jx9_A 74 TLHAVDRVLIFTP--DTERSDLLASLARYDAWHTPYS------IITLGDVTETLERSIAPLA-LKFDKGLLPAED 139 (170)
T ss_dssp CCCTTCEEEEEES--CSCCHHHHHHHHHHHHHTCCEE------EEESSCCCTTGGGSSSCEE-CCCCSCSEECTT
T ss_pred CCCCCCEEEEEeC--CCCCHHHHHHHHHHHHCCCcEE------EEeCcchhccccCcHHHHH-hCCCCCceECCC
Confidence 5678998865553 2655555567788889999997 3466 33333 2344444 223555666643
No 167
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=31.06 E-value=1.1e+02 Score=19.90 Aligned_cols=37 Identities=14% Similarity=0.250 Sum_probs=16.0
Q ss_pred HHHHHHHHHHcCC---CEEEEcCCCh-HHHHHHHHHHHhcC
Q 045468 180 RGELEEVLKLVKP---QHFLPIHGEL-LFLKEHELLGRSTG 216 (221)
Q Consensus 180 ~~dL~~~i~~i~P---k~iiPVHge~-~~~~~~~~~~~~~g 216 (221)
..|++++|+.++- ..++-|.|.. .+.-++.+.|+..|
T Consensus 37 sqdirdiiksmkdngkplvvfvngasqndvnefqneakkeg 77 (112)
T 2lnd_A 37 SQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEG 77 (112)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcC
Confidence 3455555555421 1344444432 23444444554444
No 168
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=30.96 E-value=1.2e+02 Score=23.86 Aligned_cols=70 Identities=16% Similarity=0.196 Sum_probs=45.5
Q ss_pred cHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCC
Q 045468 146 NESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGI 217 (221)
Q Consensus 146 ~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~ 217 (221)
++.+....-..-.+.|++++..+. .++..|-|..+|.+.|-+.+.++.=|=.=|..+.+.+..+++ +.|-
T Consensus 144 t~eei~~a~~ia~~aGADfVKTST-Gf~~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i-~aGa 213 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTST-GFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAML-DAGA 213 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCC-SCCTTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHH-HTTC
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCC-CCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-Hhcc
Confidence 334444555666678999985443 232248899999999999999876565556666554444433 4553
No 169
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=29.52 E-value=85 Score=25.33 Aligned_cols=67 Identities=19% Similarity=0.271 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CCEEEEcCC--ChHHHHHHHHHHHhcCCC
Q 045468 148 SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQHFLPIHG--ELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 148 ~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk~iiPVHg--e~~~~~~~~~~~~~~g~~ 218 (221)
.....+...+.+.|++.+. ...+.|-+.+++..++++.++ |..-|-+|+ ..-...+++-.|.+.|..
T Consensus 156 ~~~~~~~~~~~~~Ga~~i~----l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~ 227 (298)
T 2cw6_A 156 AKVAEVTKKFYSMGCYEIS----LGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVS 227 (298)
T ss_dssp HHHHHHHHHHHHTTCSEEE----EEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCEEE----ecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 4566778888999997762 567899999999999999884 443455665 666777888888888875
No 170
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=29.38 E-value=38 Score=29.71 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=27.7
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
..+..|.+.|+++. ++.|| |.+.++++++++.++
T Consensus 18 e~l~~li~aGm~v~-----RlNfs-Hg~~e~h~~~i~~iR 51 (470)
T 1e0t_A 18 EMLAKMLDAGMNVM-----RLNFS-HGDYAEHGQRIQNLR 51 (470)
T ss_dssp HHHHHHHHHTEEEE-----EEETT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 34577778899998 78776 999999999988763
No 171
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=29.36 E-value=1.9e+02 Score=24.47 Aligned_cols=73 Identities=8% Similarity=0.059 Sum_probs=43.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEE---Ec--CCChH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFL---PI--HGELL 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~ii---PV--Hge~~ 203 (221)
+++|.||.+.+..++ ....+...+...|+++. .+... +.++ +-+.++| +.++ |- -|.-.
T Consensus 119 ~~Gd~Vi~~~~~y~~---~~~~~~~~~~~~G~~~~-----~v~~~---d~~~---l~~ai~~~t~~v~~e~p~NptG~~~ 184 (430)
T 3ri6_A 119 RAGDSVVTTDRLFGH---TLSLFQKTLPSFGIEVR-----FVDVM---DSLA---VEHACDETTKLLFLETISNPQLQVA 184 (430)
T ss_dssp CTTCEEEEETTCCHH---HHHHHHTHHHHTTCEEE-----EECTT---CHHH---HHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEcCCCchh---HHHHHHHHHHHcCCEEE-----EeCCC---CHHH---HHHhhCCCCeEEEEECCCCCCCeec
Confidence 488998887653333 22223346677899876 23211 4444 4455544 4555 21 24445
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.+++|++.|+
T Consensus 185 dl~~i~~la~~~g~ 198 (430)
T 3ri6_A 185 DLEALSKVVHAKGI 198 (430)
T ss_dssp CHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHcCC
Confidence 78889999999885
No 172
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=29.32 E-value=38 Score=29.95 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
..+..|.+.|+++. ++.|| |.+.+++.+.++.++
T Consensus 36 e~l~~Li~aGmnv~-----RlNfS-HG~~e~h~~~i~~iR 69 (499)
T 3hqn_D 36 EALKGLIQSGMSVA-----RMNFS-HGSHEYHQTTINNVR 69 (499)
T ss_dssp HHHHHHHHHTEEEE-----EEETT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 34577888999998 88876 999999999888763
No 173
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=29.15 E-value=68 Score=25.59 Aligned_cols=77 Identities=12% Similarity=0.010 Sum_probs=44.6
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHc--CCeEEecCCceeeeecCCCHHHHHH-HHHHc------CCCEEEEcC---
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEI--GSTIVMGRNEGLHTSGHGYRGELEE-VLKLV------KPQHFLPIH--- 199 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~--g~~v~~~~~~~~h~SGHA~~~dL~~-~i~~i------~Pk~iiPVH--- 199 (221)
++|.|+.+.. ++-..... ..+... |++++..+.+ .+..+.++|++ .++.. +|+.++..|
T Consensus 82 ~gd~vi~~~~---~~~~~~~~--~~~~~~~~g~~~~~v~~~----~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~ 152 (356)
T 1v72_A 82 PWGNIYCHPA---SHINNDEC--GAPEFFSNGAKLMTVDGP----AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE 152 (356)
T ss_dssp TTEEEEECTT---SHHHHSST--THHHHHTTSCEEEECCCG----GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT
T ss_pred CCCEEEEcCc---cchhhhhc--hHHHHHhCCcEEEEecCC----CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC
Confidence 7788777543 22111000 113444 7777632221 35667888877 66542 456676665
Q ss_pred -CC---hHHHHHHHHHHHhcCC
Q 045468 200 -GE---LLFLKEHELLGRSTGI 217 (221)
Q Consensus 200 -ge---~~~~~~~~~~~~~~g~ 217 (221)
|- ..++.+.++++++.|+
T Consensus 153 tG~~~~~~~l~~i~~~~~~~~~ 174 (356)
T 1v72_A 153 VGSIYTLDEIEAIGDVCKSSSL 174 (356)
T ss_dssp TSCCCCHHHHHHHHHHHHHTTC
T ss_pred CCccCCHHHHHHHHHHHHHcCC
Confidence 44 5678888889998885
No 174
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=29.11 E-value=92 Score=26.12 Aligned_cols=33 Identities=3% Similarity=-0.018 Sum_probs=27.1
Q ss_pred CCcEEEEeccccHHHHHHHHHHHHHcCCeEEEE
Q 045468 32 KGRVITTQFASNIHRLGSVKAAADLTGRKLVFV 64 (221)
Q Consensus 32 ~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~ 64 (221)
++..+-.+-..|++-++.++++|.+.+.++++-
T Consensus 19 ~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq 51 (349)
T 3elf_A 19 NSYAFPAINCTSSETVNAAIKGFADAGSDGIIQ 51 (349)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEE
Confidence 456665555678999999999999999988885
No 175
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=28.94 E-value=1.1e+02 Score=26.07 Aligned_cols=39 Identities=21% Similarity=0.036 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCC
Q 045468 179 YRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGI 217 (221)
Q Consensus 179 ~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~ 217 (221)
+.+.|.++++..++..++|.+|...+....++.+.+.|+
T Consensus 67 d~~~l~~~~~~~~id~v~~~~g~~~E~~~~~~~~~~~gi 105 (461)
T 2dzd_A 67 DIEGIIEIAKAHDVDAIHPGYGFLSENIQFAKRCREEGI 105 (461)
T ss_dssp CHHHHHHHHHHTTCCEEECCSSSSTTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCCCEEEECCCccccCHHHHHHHHHcCC
Confidence 467888888888999999988642222245566666775
No 176
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=28.91 E-value=99 Score=25.36 Aligned_cols=74 Identities=11% Similarity=0.050 Sum_probs=40.8
Q ss_pred ccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecC---CceeeeecCCC--HHHHHHHHHHcCCCEEEEcCCCh
Q 045468 129 KLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGR---NEGLHTSGHGY--RGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~---~~~~h~SGHA~--~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
++++||+|-+.++-.+-.+....+...+|+..|.+|+..+ ...-++||+.- .+||.++...=+.+.|+++=|.+
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy 91 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGY 91 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSS
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCc
Confidence 4567888855554222234455677788888888887322 11122455421 23444444333446888888854
No 177
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=28.91 E-value=1.2e+02 Score=24.46 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=43.4
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee-ec-CCCHHHHHHHHHHcCCCEEEEcCCCh-------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT-SG-HGYRGELEEVLKLVKPQHFLPIHGEL------- 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~-SG-HA~~~dL~~~i~~i~Pk~iiPVHge~------- 202 (221)
++|.|+...+ ++-.. ...+...|++++. +.. .| ..+.++|.+.++ -+|+.++-.+-.+
T Consensus 110 ~gd~vl~~~p---~y~~~----~~~~~~~g~~~~~-----~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~ 176 (376)
T 2dou_A 110 PEDLLLLPEV---AYPSY----FGAARVASLRTFL-----IPLREDGLADLKAVPEGVW-REAKVLLLNYPNNPTGAVAD 176 (376)
T ss_dssp TTCEEEEESS---CCHHH----HHHHHHTTCEEEE-----ECBCTTSSBCGGGSCHHHH-HHEEEEEECSSCTTTCCCCC
T ss_pred CCCEEEECCC---CcHhH----HHHHHHcCCEEEE-----eeCCCCCCCCHHHHHHhhc-cCceEEEECCCCCCcCccCC
Confidence 7888777654 44322 1234457887762 222 12 245677777664 3567777655333
Q ss_pred -HHHHHHHHHHHhcCC
Q 045468 203 -LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 -~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 177 ~~~l~~l~~~~~~~~~ 192 (376)
T 2dou_A 177 WGYFEEALGLARKHGL 192 (376)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 257888888888874
No 178
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=28.85 E-value=68 Score=27.69 Aligned_cols=74 Identities=11% Similarity=-0.001 Sum_probs=45.8
Q ss_pred CCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh-----HHHHH
Q 045468 133 EDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL-----LFLKE 207 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~-----~~~~~ 207 (221)
+|.||.+....+++ .+.+...|++++..+ ....|+.+.++|++.++. +++.++..|..+ ..+.+
T Consensus 192 ~d~Vi~~~~~~~~~-------~~~~~~~G~~v~~v~---~~~~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~ 260 (514)
T 3mad_A 192 APEAVVPVSAHAAF-------DKAAQYFGIKLVRTP---LDADYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPE 260 (514)
T ss_dssp SCEEEEETTSCTHH-------HHHHHHHTCEEEEEC---BCTTSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHH
T ss_pred CCeEEEeCccchHH-------HHHHHHcCCeeEEee---eCCCCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHH
Confidence 37777776544442 233444588776322 222566677887776643 567777666543 35788
Q ss_pred HHHHHHhcCC
Q 045468 208 HELLGRSTGI 217 (221)
Q Consensus 208 ~~~~~~~~g~ 217 (221)
.++++++.|+
T Consensus 261 i~~la~~~~i 270 (514)
T 3mad_A 261 IAALAAEHGI 270 (514)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhCC
Confidence 8888888874
No 179
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=28.75 E-value=95 Score=26.16 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=43.3
Q ss_pred ccCCCCEEEEEecCCCCc---HHHHHHHHHHHHHcCCeEEecCC---ceeeeecCC--CHHHHHHHHHHcCCCEEEEcCC
Q 045468 129 KLTNEDVILYSAKVIPGN---ESRVMKMLNRISEIGSTIVMGRN---EGLHTSGHG--YRGELEEVLKLVKPQHFLPIHG 200 (221)
Q Consensus 129 ~~~~~~~vI~s~~~~pg~---e~~~~~~~~~l~~~g~~v~~~~~---~~~h~SGHA--~~~dL~~~i~~i~Pk~iiPVHg 200 (221)
.|++||+|-+.++-.+.. .....+...+|+..|.+|+..+. ..-.+||+. -.+||.++...=+.+.|+++=|
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 467899996666533322 34556677889999998874321 112345553 2334444443333468999888
Q ss_pred Ch
Q 045468 201 EL 202 (221)
Q Consensus 201 e~ 202 (221)
.+
T Consensus 119 Gy 120 (371)
T 3tla_A 119 GD 120 (371)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 180
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=28.73 E-value=84 Score=22.58 Aligned_cols=52 Identities=6% Similarity=0.116 Sum_probs=35.5
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK 188 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~ 188 (221)
..-..+|.++.+.|. ....+.+.|...|++++. ..+.+-|+++.+|+.++-+
T Consensus 82 gk~v~~fgs~g~~g~--a~~~l~~~l~~~G~~~v~---~~~~~~~~P~~~dl~~~~~ 133 (161)
T 3hly_A 82 KQAIGLFDSYGGDDE--PIDALLAQFRNLGLHTAF---PPIRVKDQPTEAIYQQCEE 133 (161)
T ss_dssp TSEEEEECCCCSSBC--CHHHHHHHHHHTTCEESS---SCBCCCSSCCHHHHHHHHH
T ss_pred CCEEEEEEcCCCCcH--HHHHHHHHHHHCCCEEec---CceEEeeCCCHHHHHHHHH
Confidence 444667887766542 234677888889998872 2356788999999876544
No 181
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=28.63 E-value=2.4e+02 Score=23.10 Aligned_cols=80 Identities=9% Similarity=0.086 Sum_probs=57.6
Q ss_pred EEEEEecCCCCcH-HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---C-CEEEEcCC--ChHHHHH
Q 045468 135 VILYSAKVIPGNE-SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---P-QHFLPIHG--ELLFLKE 207 (221)
Q Consensus 135 ~vI~s~~~~pg~e-~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---P-k~iiPVHg--e~~~~~~ 207 (221)
.++++-...+.++ .....+...+...|+..+. ...+-|-+.+++..++++.++ | ..-|=+|+ ..-...+
T Consensus 135 ~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~----l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avA 210 (345)
T 1nvm_A 135 DTVGFLMMSHMIPAEKLAEQGKLMESYGATCIY----MADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVA 210 (345)
T ss_dssp EEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEE----EECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHH
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEE----ECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHH
Confidence 4555543345544 4567788889999998873 567889999999999998883 3 66666765 4456777
Q ss_pred HHHHHHhcCCC
Q 045468 208 HELLGRSTGIR 218 (221)
Q Consensus 208 ~~~~~~~~g~~ 218 (221)
+...|.+.|..
T Consensus 211 n~laA~~aGa~ 221 (345)
T 1nvm_A 211 NSIVAVEEGCD 221 (345)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 77788888864
No 182
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=28.35 E-value=61 Score=25.83 Aligned_cols=74 Identities=11% Similarity=-0.038 Sum_probs=45.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC-----hHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE-----LLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge-----~~~~~ 206 (221)
++|.|+......+++. ....+...|++++..+ ....|.-+.++|++ -+++.++..|.. ...+.
T Consensus 74 ~gd~vl~~~~~~~~~~-----~~~~~~~~g~~~~~v~---~~~~~~~d~~~l~~----~~~~~v~~~~~~nptG~~~~l~ 141 (352)
T 1iug_A 74 PGERVLVPVYGKFSER-----FYEIALEAGLVVERLD---YPYGDTPRPEDVAK----EGYAGLLLVHSETSTGALADLP 141 (352)
T ss_dssp TTCEEEEEECSHHHHH-----HHHHHHHTTCEEEEEE---CCTTCCCCTTTSCC----SSCSEEEEESEETTTTEECCHH
T ss_pred CCCeEEEEeCCchhHH-----HHHHHHHcCCceEEEe---CCCCCCCCHHHHhc----cCCcEEEEEEecCCcceecCHH
Confidence 7888888776444432 2344566788776321 11234556677665 367777776643 34577
Q ss_pred HHHHHHHhc--CC
Q 045468 207 EHELLGRST--GI 217 (221)
Q Consensus 207 ~~~~~~~~~--g~ 217 (221)
+.++++++. |+
T Consensus 142 ~i~~l~~~~~~~~ 154 (352)
T 1iug_A 142 ALARAFKEKNPEG 154 (352)
T ss_dssp HHHHHHHHHCTTC
T ss_pred HHHHHHHhhCCCC
Confidence 888888887 74
No 183
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=28.31 E-value=2.4e+02 Score=22.99 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=41.6
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecC-CCHHHHHHHHHHc--CCCEEEEcCCCh------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGH-GYRGELEEVLKLV--KPQHFLPIHGEL------ 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGH-A~~~dL~~~i~~i--~Pk~iiPVHge~------ 202 (221)
++|.|+...+..+++. ..+...|++++ .+..... ...-|+..+-+.+ +++.++-.|-.+
T Consensus 122 ~gd~Vl~~~p~~~~~~-------~~~~~~g~~~~-----~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~ 189 (412)
T 2x5d_A 122 HGDTILVPNPSYPIHI-------YGAVIAGAQVR-----SVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCV 189 (412)
T ss_dssp TTCEEEEEESCCHHHH-------HHHHHHTCEEE-----EEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCC
T ss_pred CCCEEEEcCCCchhHH-------HHHHHcCCEEE-----EeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcC
Confidence 7888888776444332 22345688776 2222111 1224566666665 466666434222
Q ss_pred --HHHHHHHHHHHhcCC
Q 045468 203 --LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 --~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 190 ~~~~l~~l~~~~~~~~~ 206 (412)
T 2x5d_A 190 ELDFFERVVALAKQYDV 206 (412)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 367888888888774
No 184
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=28.30 E-value=32 Score=29.24 Aligned_cols=73 Identities=15% Similarity=0.090 Sum_probs=42.7
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEE---EcC--CChH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFL---PIH--GELL 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~ii---PVH--ge~~ 203 (221)
++||.||.+... |..-...+...+.+.|+++. .+. +.+.++|++ .++| +.++ |.+ |.-.
T Consensus 119 ~~Gd~Vi~~~~~---y~~~~~~~~~~l~~~G~~v~-----~v~---~~d~~~le~---ai~~~tklV~~e~~~NptG~v~ 184 (415)
T 2fq6_A 119 EQGDHVLMTNTA---YEPSQDFCSKILSKLGVTTS-----WFD---PLIGADIVK---HLQPNTKIVFLESPGSITMEVH 184 (415)
T ss_dssp CTTCEEEEETTS---CHHHHHHHHHTGGGGTCEEE-----EEC---TTCGGGGGG---GCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEeCCC---chHHHHHHHHHHHHcCcEEE-----EEC---CCCHHHHHH---hhccCCcEEEEECCCCCCCEee
Confidence 478998888653 33332233345667898876 222 225555554 4445 4444 221 4445
Q ss_pred HHHHHHHHHHh--cCC
Q 045468 204 FLKEHELLGRS--TGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~--~g~ 217 (221)
++.+.+++|++ .|+
T Consensus 185 dl~~I~~la~~~~~g~ 200 (415)
T 2fq6_A 185 DVPAIVAAVRSVVPDA 200 (415)
T ss_dssp CHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHhhcCCC
Confidence 78889999999 874
No 185
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=28.29 E-value=1.4e+02 Score=22.16 Aligned_cols=66 Identities=8% Similarity=0.011 Sum_probs=41.6
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHH----HHHHHHHHHhcCCC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLF----LKEHELLGRSTGIR 218 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~----~~~~~~~~~~~g~~ 218 (221)
.+...+.+.|..++.-..+.... -..+.+++...+..++|..||..|-..+. +-...+.+++.|+.
T Consensus 109 ~~~~~~~~~G~~~v~w~~d~~Dw-~~~~~~~i~~~~~~~~~g~IiL~Hd~~~~t~~al~~ii~~l~~~Gy~ 178 (195)
T 2cc0_A 109 TLRSVEAKYGLTEVIWDVDSQDW-NNASTDAIVQAVSRLGNGQVILMHDWPANTLAAIPRIAQTLAGKGLC 178 (195)
T ss_dssp HHHHHHHHTTCEECCCSEECCGG-GTCCHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHCCCeEEEeccCCCcc-CCCCHHHHHHHHhCcCcCeEEEECCCchhHHHHHHHHHHHHHHCCCE
Confidence 34567888898776211001111 13578888888888999999999976543 33344456677863
No 186
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=28.29 E-value=2.1e+02 Score=22.13 Aligned_cols=12 Identities=8% Similarity=0.135 Sum_probs=4.9
Q ss_pred HHHHHHHHcCCe
Q 045468 152 KMLNRISEIGST 163 (221)
Q Consensus 152 ~~~~~l~~~g~~ 163 (221)
...+.+...+++
T Consensus 52 ~~i~~l~~~~vd 63 (305)
T 3g1w_A 52 TVLEQAIAKNPA 63 (305)
T ss_dssp HHHHHHHHHCCS
T ss_pred HHHHHHHHhCCC
Confidence 333444444443
No 187
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=28.18 E-value=84 Score=24.42 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=32.4
Q ss_pred EEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEe
Q 045468 103 LIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVM 166 (221)
Q Consensus 103 vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~ 166 (221)
+|+..|+.|+....+-.-+.. .+.++..+|++... ....+..||.+.|+.+..
T Consensus 87 ~IviaG~Gg~~i~~Il~~~~~-----~L~~~~~lVlq~~~------~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 87 VITIAGMGGRLIARILEEGLG-----KLANVERLILQPNN------REDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp EEEEEEECHHHHHHHHHHTGG-----GCTTCCEEEEEESS------CHHHHHHHHHHTTEEEEE
T ss_pred EEEEcCCChHHHHHHHHHHHH-----HhCCCCEEEEECCC------CHHHHHHHHHHCCCEEEE
Confidence 344457766654443322222 34577788887652 344678999999987764
No 188
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=28.16 E-value=82 Score=25.33 Aligned_cols=48 Identities=10% Similarity=-0.028 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEE
Q 045468 14 TTSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLV 62 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~v 62 (221)
+.|.+|=.+-++.+++..+| |++.+.+.+.....++.+.|++.|=.-+
T Consensus 48 ~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~Gadav 95 (288)
T 2nuw_A 48 ALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDILGV 95 (288)
T ss_dssp GSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSCCSEE
T ss_pred hCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcCCCEE
Confidence 46777766666666655667 9999999999999999999999987433
No 189
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=28.16 E-value=2.2e+02 Score=23.43 Aligned_cols=94 Identities=16% Similarity=0.032 Sum_probs=0.0
Q ss_pred EEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecC-CCHH
Q 045468 103 LIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGH-GYRG 181 (221)
Q Consensus 103 vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGH-A~~~ 181 (221)
+++++|.+.-....+.-+.. ++|.|+...+..++ ....+...|++++ .+..... -+.+
T Consensus 112 v~~t~G~~~al~~~~~~l~~---------~gd~Vl~~~p~y~~-------~~~~~~~~g~~~~-----~v~~~~~~~d~~ 170 (425)
T 1vp4_A 112 LIFTVGSQQALDLIGKLFLD---------DESYCVLDDPAYLG-------AINAFRQYLANFV-----VVPLEDDGMDLN 170 (425)
T ss_dssp EEEEEHHHHHHHHHHHHHCC---------TTCEEEEEESCCHH-------HHHHHHTTTCEEE-----EEEEETTEECHH
T ss_pred EEEeccHHHHHHHHHHHhCC---------CCCEEEEeCCCcHH-------HHHHHHHcCCEEE-----EeccCCCCCCHH
Q ss_pred HHHHHHHH-------cCCCEE-EEcCCChH--------HHHHHHHHHHhcCC
Q 045468 182 ELEEVLKL-------VKPQHF-LPIHGELL--------FLKEHELLGRSTGI 217 (221)
Q Consensus 182 dL~~~i~~-------i~Pk~i-iPVHge~~--------~~~~~~~~~~~~g~ 217 (221)
+|++.++. -+++.+ +--+-.+| ++.+.++++++.|+
T Consensus 171 ~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~ 222 (425)
T 1vp4_A 171 VLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDL 222 (425)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCC
No 190
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=28.09 E-value=50 Score=21.57 Aligned_cols=50 Identities=14% Similarity=0.122 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHhcC-CcEEEEe-ccccHHHHHHHHHHHHHcCC-eEEE
Q 045468 14 TTSESVVKDALMRHVSAAK-GRVITTQ-FASNIHRLGSVKAAADLTGR-KLVF 63 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~-g~viv~~-~a~ni~Rl~~i~~~a~~~gR-~~vi 63 (221)
..+..++...+.+.....+ ..|+|-+ -....+++..++++|++.|- ++.+
T Consensus 38 ~v~~~~L~~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l 90 (99)
T 2pfu_A 38 PVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGL 90 (99)
T ss_dssp EECSSSHHHHHHHHSSSCCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEEC
T ss_pred ecCHHHHHHHHHHHHhcCCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 3445567777776554333 3566666 33578888888888888876 3443
No 191
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=28.07 E-value=66 Score=27.29 Aligned_cols=79 Identities=11% Similarity=0.075 Sum_probs=46.4
Q ss_pred CCCCEEEEEe-cCCCCcHHHHHHHH-------HHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC---
Q 045468 131 TNEDVILYSA-KVIPGNESRVMKML-------NRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH--- 199 (221)
Q Consensus 131 ~~~~~vI~s~-~~~pg~e~~~~~~~-------~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH--- 199 (221)
++||.+|.+. ...+++.. +. ..+...|+++...+ ....|..+.++|++.++. +++.++--+
T Consensus 99 ~~GD~Vl~~~~~~y~~~~~----~~~~~g~~~~~l~~~G~~~~~v~---~~~~g~~d~e~l~~ai~~-~tklV~i~~s~g 170 (409)
T 3jzl_A 99 RPDDELLYITGQPYDTLEE----IVGIRKQGQGSLKDFHIGYSSVP---LLENGDVDFPRIAKKMTP-KTKMIGIQRSRG 170 (409)
T ss_dssp CTTCEEEECSSSCCTTHHH----HHTSSSSSSSCTGGGTCEEEECC---CCTTSCCCHHHHHHHCCT-TEEEEEEECSCT
T ss_pred CCCCEEEEeCCCCcHhHHH----HHhcccchhhHHHHcCCEEEEeC---CCCCCCcCHHHHHHhccC-CCeEEEEECCCC
Confidence 4899988887 43334332 12 34566788776322 112355667776665432 345555433
Q ss_pred ------CChHHHHHHHHHHHh--cCC
Q 045468 200 ------GELLFLKEHELLGRS--TGI 217 (221)
Q Consensus 200 ------ge~~~~~~~~~~~~~--~g~ 217 (221)
|.-.++.+.++++++ .|+
T Consensus 171 ~p~nptg~v~~l~~I~~la~~~~~~~ 196 (409)
T 3jzl_A 171 YADRPSFTIEKIKEMIVFVKNINPEV 196 (409)
T ss_dssp TSSSCCCCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCcCccccHHHHHHHHHhhCCCC
Confidence 345578888999998 664
No 192
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=27.54 E-value=92 Score=25.20 Aligned_cols=23 Identities=4% Similarity=-0.021 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCCeEEEEccc
Q 045468 45 HRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 45 ~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
+.++.|.++|++.|-.+++|...
T Consensus 180 ~~l~~i~~~~~~~~~~li~De~~ 202 (391)
T 3dzz_A 180 EEVKRIAELCAKHQVLLISDEIH 202 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHHCCCEEEEeccc
Confidence 78999999999999988888643
No 193
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=27.37 E-value=1.4e+02 Score=23.89 Aligned_cols=23 Identities=9% Similarity=-0.044 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcc
Q 045468 44 IHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 44 i~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
.++++.+.++|++.|-.+++|..
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~ 197 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEI 197 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEcc
Confidence 57899999999999998888854
No 194
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=27.24 E-value=2.6e+02 Score=22.89 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=44.5
Q ss_pred CCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc---CCCEEEEcCCChHHHHHHHHHHHhcCCC
Q 045468 143 IPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV---KPQHFLPIHGELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 143 ~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i---~Pk~iiPVHge~~~~~~~~~~~~~~g~~ 218 (221)
..|... ...+...+.+.|+.+.... .+.. ....|....+..+ +|+.+| +++.+.+.....+.|++.|+.
T Consensus 140 ~~g~~~-~~~~~~~~~~~g~~v~~~~--~~~~---~~~~d~~~~l~~ik~~~~~vii-~~~~~~~~~~i~~qa~~~g~~ 211 (389)
T 3o21_A 140 ERGFSV-LQAIMEAAVQNNWQVTARS--VGNI---KDVQEFRRIIEEMDRRQEKRYL-IDCEVERINTILEQVVILGKH 211 (389)
T ss_dssp TTCSHH-HHHHHHHHHHTTCEEEEEE--CTTC---CCTHHHHHHHHHHHTTTCCEEE-EESCHHHHHHHHHHHHHHCSC
T ss_pred cHHHHH-HHHHHHHhhcCCCeEEEEE--ecCC---CCcHHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHHHHHcCcc
Confidence 445443 3456778888999876211 1111 1234666666655 576555 588899999999999999975
No 195
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=27.24 E-value=2e+02 Score=24.73 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=58.6
Q ss_pred CCEEEEEecCCCC-cHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC--CCEEEEcCC--ChHHHHH
Q 045468 133 EDVILYSAKVIPG-NESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK--PQHFLPIHG--ELLFLKE 207 (221)
Q Consensus 133 ~~~vI~s~~~~pg-~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~--Pk~iiPVHg--e~~~~~~ 207 (221)
+..+.++...... .......+...+.+.|++.+ ....+.|-+.|.+..++++.++ +...|=+|+ ..-...+
T Consensus 164 G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i----~l~DTvG~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvA 239 (423)
T 3ivs_A 164 GIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRV----GIADTVGCATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIA 239 (423)
T ss_dssp TCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEE----EEEETTSCCCHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHHH
T ss_pred CCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCcc----ccCCccCcCCHHHHHHHHHHHHhhcCCeEEEEECCCCchHHH
Confidence 4456666543332 23445677788888999776 2678999999999999999884 334455555 6777888
Q ss_pred HHHHHHhcCCC
Q 045468 208 HELLGRSTGIR 218 (221)
Q Consensus 208 ~~~~~~~~g~~ 218 (221)
++-.|.+.|..
T Consensus 240 N~laAv~aGa~ 250 (423)
T 3ivs_A 240 NAYCALEAGAT 250 (423)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHhCCC
Confidence 88888899874
No 196
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=26.98 E-value=1.4e+02 Score=24.45 Aligned_cols=35 Identities=11% Similarity=0.018 Sum_probs=25.5
Q ss_pred CcEEEEecccc-------HHHHHHHHHHHHHcCCeEEEEccc
Q 045468 33 GRVITTQFASN-------IHRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 33 g~viv~~~a~n-------i~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
..+++.+...| .++++.|.++|++.|-.+++|..+
T Consensus 177 ~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~ 218 (412)
T 1yaa_A 177 SIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAY 218 (412)
T ss_dssp CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 45666354444 588999999999999888887543
No 197
>1s12_A Hypothetical protein TM1457; crystal, structural genomics, PSI, berkeley structural genomics center, BSGC, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.64.2.1
Probab=26.93 E-value=24 Score=23.60 Aligned_cols=12 Identities=17% Similarity=0.243 Sum_probs=10.0
Q ss_pred eeeeecCCCHHHH
Q 045468 171 GLHTSGHGYRGEL 183 (221)
Q Consensus 171 ~~h~SGHA~~~dL 183 (221)
.+..+|||. +|+
T Consensus 10 ~f~v~GHA~-~DI 21 (94)
T 1s12_A 10 FFEVTGHAP-DKT 21 (94)
T ss_dssp EEEEECCCS-CHH
T ss_pred EEEEEcCCC-CCe
Confidence 688999999 665
No 198
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=26.73 E-value=1.2e+02 Score=24.58 Aligned_cols=46 Identities=11% Similarity=0.002 Sum_probs=28.9
Q ss_pred HHHHHHHHhcCCcEEEEecccc-------HHHHHHHHHHHHHcCCeEEEEccc
Q 045468 22 DALMRHVSAAKGRVITTQFASN-------IHRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 22 ~~i~~~~~~~~g~viv~~~a~n-------i~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
+.+.+.+.+.+-++++.+...| .+++++|.++|++.|-.+++|...
T Consensus 154 ~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 206 (399)
T 1c7n_A 154 QKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIH 206 (399)
T ss_dssp HHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTT
T ss_pred HHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 3444545422223444344444 578999999999999888887543
No 199
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=26.69 E-value=91 Score=24.34 Aligned_cols=53 Identities=13% Similarity=0.069 Sum_probs=33.4
Q ss_pred EEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEe
Q 045468 103 LIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVM 166 (221)
Q Consensus 103 vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~ 166 (221)
+|+..|+.|+....+-.-... .+++++.+|++... + ...+..||.+.|+.+..
T Consensus 93 ~IviaGmGg~lI~~IL~~~~~-----~l~~~~~lIlqp~~--~----~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 93 TITICGMGGRLIADILNNDID-----KLQHVKTLVLQPNN--R----EDDLRKWLAANDFEIVA 145 (230)
T ss_dssp EEEEEEECHHHHHHHHHHTGG-----GGTTCCEEEEEESS--C----HHHHHHHHHHTTEEEEE
T ss_pred EEEEeCCchHHHHHHHHHHHH-----HhCcCCEEEEECCC--C----hHHHHHHHHHCCCEEEE
Confidence 445567777754443322221 35577788888842 3 45778999999987764
No 200
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=26.49 E-value=1.9e+02 Score=21.16 Aligned_cols=19 Identities=16% Similarity=-0.022 Sum_probs=8.5
Q ss_pred eeeecCCCHHHHHHHHHHc
Q 045468 172 LHTSGHGYRGELEEVLKLV 190 (221)
Q Consensus 172 ~h~SGHA~~~dL~~~i~~i 190 (221)
++.-||...--+-..+-..
T Consensus 108 ~~l~G~S~Gg~~a~~~a~~ 126 (270)
T 3llc_A 108 AILVGSSMGGWIALRLIQE 126 (270)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEEEeChHHHHHHHHHHH
Confidence 4444555444444444333
No 201
>3om0_A Glutamate receptor, ionotropic kainate 5; membrane protein, ION channel; HET: NAG BMA GOL; 1.40A {Rattus norvegicus} PDB: 3om1_A* 3qlu_A* 3qlv_A
Probab=26.37 E-value=2.6e+02 Score=22.66 Aligned_cols=62 Identities=8% Similarity=-0.029 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCCC
Q 045468 151 MKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 151 ~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~~ 218 (221)
..+...+.+.|+.+.. ...++..+...+..-++..+|+.+| +++...+.....+.|++.|+.
T Consensus 156 ~~~~~~~~~~g~~v~~-----~~~~~~~d~~~~l~~i~~~~~~vii-~~~~~~~~~~~~~~a~~~g~~ 217 (393)
T 3om0_A 156 EELVRGFLISKETLSV-----RMLDDSRDPTPLLKEIRDDKVSTII-IDANASISHLVLRKASELGMT 217 (393)
T ss_dssp HHHHHHHHHSSSCEEE-----EECC-CCCSHHHHHHHHHHTCSEEE-EESCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHhhhccCCeEEE-----EecCCCCCHHHHHHHHHhcCCeEEE-EECCHHHHHHHHHHHHHcCcc
Confidence 3444556667877641 1124555555555555667898766 588899999999999999985
No 202
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=26.20 E-value=1.2e+02 Score=24.44 Aligned_cols=68 Identities=18% Similarity=0.044 Sum_probs=38.2
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCC-----hHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGE-----LLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge-----~~~~~ 206 (221)
++|.|+...+..+++. ..+...|++++ .+. -+.++|.+.++. +++.++-.+-. .....
T Consensus 112 ~gd~vl~~~p~~~~~~-------~~~~~~g~~~~-----~v~----~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~ 174 (370)
T 2z61_A 112 DGDEVLIQNPCYPCYK-------NFIRFLGAKPV-----FCD----FTVESLEEALSD-KTKAIIINSPSNPLGEVIDRE 174 (370)
T ss_dssp TTCEEEEESSCCTHHH-------HHHHHTTCEEE-----EEC----SSHHHHHHHCCS-SEEEEEEESSCTTTCCCCCHH
T ss_pred CCCEEEEeCCCchhHH-------HHHHHcCCEEE-----EeC----CCHHHHHHhccc-CceEEEEcCCCCCcCcccCHH
Confidence 7888888776555432 22455788776 222 456666555432 45555544322 22233
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
.++++++.|+
T Consensus 175 -l~~~~~~~~~ 184 (370)
T 2z61_A 175 -IYEFAYENIP 184 (370)
T ss_dssp -HHHHHHHHCS
T ss_pred -HHHHHHHcCC
Confidence 7778887764
No 203
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=26.13 E-value=1.4e+02 Score=24.87 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=31.5
Q ss_pred HcCCeEEecCCceeeeecC-CCHHHHHHHHHHc--CCCEEEEcCCCh-H-HHHHHHHHHHhcCC
Q 045468 159 EIGSTIVMGRNEGLHTSGH-GYRGELEEVLKLV--KPQHFLPIHGEL-L-FLKEHELLGRSTGI 217 (221)
Q Consensus 159 ~~g~~v~~~~~~~~h~SGH-A~~~dL~~~i~~i--~Pk~iiPVHge~-~-~~~~~~~~~~~~g~ 217 (221)
+.|.+|+ +|+.|- ....|+.++++.. .|..+++.|-+. . .. +.++.+.+.|+
T Consensus 201 ~~glPV~------iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~-e~a~~~l~~G~ 257 (364)
T 3k2g_A 201 RTGLPLM------VHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDP-VYQATLAQRGA 257 (364)
T ss_dssp HHCCCEE------EECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCH-HHHHHHHHHTC
T ss_pred HHCCeEE------EecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCH-HHHHHHHhCCc
Confidence 5677774 887553 4456666677665 345788889884 4 44 33443344564
No 204
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=26.09 E-value=95 Score=25.66 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=41.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEE--cC---CChHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLP--IH---GELLFLK 206 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiP--VH---ge~~~~~ 206 (221)
++|.|+.+....+++... +.......|+++. .+.. .+.++|++.++. +++.++- +| |...++.
T Consensus 103 ~gd~vl~~~~~~~~~~~~---~~~~~~~~g~~~~-----~~~~---~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~ 170 (398)
T 1gc0_A 103 PGDEVLLGNTLYGCTFAF---LHHGIGEFGVKLR-----HVDM---ADLQALEAAMTP-ATRVIYFESPANPNMHMADIA 170 (398)
T ss_dssp TTCEEEEESSCCSHHHHH---HHHTGGGGTCEEE-----EECT---TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred CCCEEEEeCCCchhHHHH---HHHHHHHcCCEEE-----EECC---CCHHHHHHhcCC-CCeEEEEECCCCCCcccccHH
Confidence 788888877655543322 2222356788775 2221 244444444321 3445552 22 4455788
Q ss_pred HHHHHHHhcCC
Q 045468 207 EHELLGRSTGI 217 (221)
Q Consensus 207 ~~~~~~~~~g~ 217 (221)
+.++++++.|+
T Consensus 171 ~i~~l~~~~~~ 181 (398)
T 1gc0_A 171 GVAKIARKHGA 181 (398)
T ss_dssp HHHHHHGGGTC
T ss_pred HHHHHHHHcCC
Confidence 88899998885
No 205
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=25.89 E-value=32 Score=26.89 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=12.7
Q ss_pred CcEEEEeccccHHHHHHHHHHHHHcCCeE
Q 045468 33 GRVITTQFASNIHRLGSVKAAADLTGRKL 61 (221)
Q Consensus 33 g~viv~~~a~ni~Rl~~i~~~a~~~gR~~ 61 (221)
++++..-|+.+.++-+.+.++++..++++
T Consensus 229 ~~lil~H~~~~~~~~~~~~~~~~~~~~~v 257 (268)
T 1zkp_A 229 KELLLTHLPHTGNPADLVTEAKQIFSGHI 257 (268)
T ss_dssp SEEEEESBCSSSCTHHHHHHHHTTCCSEE
T ss_pred CEEEEECCCCCCChHHHHHHHHHhCCCCE
Confidence 34555555554443333333444444433
No 206
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=25.89 E-value=2.6e+02 Score=22.58 Aligned_cols=75 Identities=23% Similarity=0.227 Sum_probs=45.0
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEE--EcC----CC---h
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFL--PIH----GE---L 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~ii--PVH----ge---~ 202 (221)
++|.|+...+..+++. ..+...|++++..+ ....| -+.++|++.++.-+++.++ |.. |. .
T Consensus 114 ~gd~Vl~~~p~y~~~~-------~~~~~~g~~~~~~~---~~~~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~ 182 (397)
T 2zyj_A 114 EGSPVLLEAPSYMGAI-------QAFRLQGPRFLTVP---AGEEG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPL 182 (397)
T ss_dssp TTCEEEEEESCCHHHH-------HHHHTTCCEEEEEE---EETTE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCH
T ss_pred CCCEEEEeCCCcHHHH-------HHHHHcCCEEEecC---cCCCC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCH
Confidence 7888887665333322 33445788776211 11112 5788888888766788653 332 22 2
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 183 ~~l~~l~~~~~~~~~ 197 (397)
T 2zyj_A 183 PARKRLLQMVMERGL 197 (397)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 357788888888774
No 207
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=25.84 E-value=1.1e+02 Score=24.99 Aligned_cols=46 Identities=13% Similarity=0.039 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCC
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGR 59 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR 59 (221)
+.|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=
T Consensus 57 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Ga 104 (309)
T 3fkr_A 57 AITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGA 104 (309)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCC
Confidence 34555544444444443344 58888888888888888888888876
No 208
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=25.80 E-value=1.8e+02 Score=23.47 Aligned_cols=47 Identities=17% Similarity=0.093 Sum_probs=31.1
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCe
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRK 60 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~ 60 (221)
..|.+|=.+-++.+++..+| .|++.+.+.+.....++.+.|++.|=.
T Consensus 65 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 65 TTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 34555544444444433333 578888888888888888888888773
No 209
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=25.70 E-value=1.3e+02 Score=24.81 Aligned_cols=74 Identities=12% Similarity=-0.030 Sum_probs=44.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHH-cCCeEEecCCceeeeecCCCHHHHHHHHHHc--CCCEEEEcCCChH-----
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISE-IGSTIVMGRNEGLHTSGHGYRGELEEVLKLV--KPQHFLPIHGELL----- 203 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~-~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i--~Pk~iiPVHge~~----- 203 (221)
++|.|+...+..+++. +.+.. .|++++..+...- .+.-+.++|+..++.. +++.++-.|-.+|
T Consensus 136 ~gd~Vl~~~p~y~~~~-------~~~~~~~g~~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~ 206 (430)
T 2x5f_A 136 QDDTILLPEHNWGNYK-------LVFNTRNGANLQTYPIFDK--DGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP 206 (430)
T ss_dssp TTCEEEEESSCCTHHH-------HHHTTTTCCEEEEECCBCT--TSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred CCCEEEEcCCcCccHH-------HHHHHhcCCeEEEEeccCc--cCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence 7888888765444432 33444 7887762211000 1346788888888764 4566665543322
Q ss_pred ---HHHHHHHHHHh
Q 045468 204 ---FLKEHELLGRS 214 (221)
Q Consensus 204 ---~~~~~~~~~~~ 214 (221)
++.+.++++++
T Consensus 207 ~~~~l~~i~~~~~~ 220 (430)
T 2x5f_A 207 THKEVTTIVEAIKA 220 (430)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 47888888887
No 210
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.29 E-value=1.1e+02 Score=24.93 Aligned_cols=49 Identities=22% Similarity=0.163 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCeEE
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRKLV 62 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~~v 62 (221)
+.|.+|-.+-+..+++..+| .|++.+.+.+.....++.+.|++.|=.-+
T Consensus 72 ~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadav 122 (314)
T 3qze_A 72 TLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADAC 122 (314)
T ss_dssp GCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEE
Confidence 45666555555555444344 68888888899999999999999887333
No 211
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=25.22 E-value=1e+02 Score=25.23 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCeEEE
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRKLVF 63 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi 63 (221)
+.|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=.-++
T Consensus 73 ~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavl 124 (315)
T 3na8_A 73 YLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVM 124 (315)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 45666655555555544344 588888888999999999999998874333
No 212
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=25.20 E-value=36 Score=29.45 Aligned_cols=63 Identities=16% Similarity=0.005 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH--------HcCCCEEEEcCCChHHHHHHHHHHHhcCCC
Q 045468 151 MKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK--------LVKPQHFLPIHGELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 151 ~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~--------~i~Pk~iiPVHge~~~~~~~~~~~~~~g~~ 218 (221)
..-++.|..+|+..++..-..-+.|++...-+...+.. .+.|++ |...++.++++.|++.|+.
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~-----Gt~~df~~lv~~aH~~Gi~ 94 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKY-----GTKSELQDAIGSLHSRNVQ 94 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSS-----CCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCC-----CCHHHHHHHHHHHHHCCCE
Confidence 33457999999988854321223343222222222222 355554 8888999999999999863
No 213
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=25.10 E-value=49 Score=29.88 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=27.7
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
.++..|.+.|+++. ++.|| |.+.++++++++.++
T Consensus 19 ~~l~~l~~aGm~v~-----RlNfs-Hg~~~~h~~~i~~ir 52 (587)
T 2e28_A 19 DKLVQLMEAGMNVA-----RLNFS-HGDHEEHGRRIANIR 52 (587)
T ss_dssp HHHHHHHHHTEEEE-----EEETT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 34577778899998 78776 999999999988763
No 214
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=25.01 E-value=1.5e+02 Score=24.24 Aligned_cols=24 Identities=4% Similarity=-0.215 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEcc
Q 045468 43 NIHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 43 ni~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
+.++++.|.++|++.|-.+++|..
T Consensus 201 ~~~~l~~i~~~~~~~~~~li~De~ 224 (409)
T 4eu1_A 201 THDDWRQVCDVIKRRNHIPFVDMA 224 (409)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CHHHHHHHHHHHHhCCcEEEEecc
Confidence 478999999999999988888754
No 215
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=24.77 E-value=2.7e+02 Score=22.23 Aligned_cols=73 Identities=11% Similarity=-0.083 Sum_probs=40.9
Q ss_pred CCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCCh--------HH
Q 045468 133 EDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGEL--------LF 204 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~--------~~ 204 (221)
+|.|+...+..+++. +.+...|++++..+. ...+.-.. +|.+.+.. +++.++-.+-.+ .+
T Consensus 108 gd~vl~~~p~~~~~~-------~~~~~~g~~~~~~~~---~~~~~~~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~ 175 (376)
T 3ezs_A 108 NPTIAYPNPFYQIYE-------GAAKFIKAKSLLMPL---TKENDFTP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEE 175 (376)
T ss_dssp SCEEEEEESCCTHHH-------HHHHHTTCEEEEEEC---CGGGTSCC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHH
T ss_pred CCEEEEecCCcHhHH-------HHHHHcCCEEEEccc---CCCCCcch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHH
Confidence 888888776544322 335567887763211 00111111 45554443 678777544333 35
Q ss_pred HHHHHHHHHhcCC
Q 045468 205 LKEHELLGRSTGI 217 (221)
Q Consensus 205 ~~~~~~~~~~~g~ 217 (221)
+.+.++++++.|+
T Consensus 176 l~~i~~~~~~~~~ 188 (376)
T 3ezs_A 176 LISWVKLALKHDF 188 (376)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCc
Confidence 8888888888774
No 216
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=24.69 E-value=57 Score=29.24 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=27.1
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHc
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLV 190 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i 190 (221)
..+..|.+.|++++ ++.|| |.+.+++.+.++.+
T Consensus 78 e~l~~Li~aGmnv~-----RlNfS-HG~~e~h~~~i~~i 110 (550)
T 3gr4_A 78 ETLKEMIKSGMNVA-----RLNFS-HGTHEYHAETIKNV 110 (550)
T ss_dssp HHHHHHHHHTCCEE-----EEETT-SSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHH
Confidence 34677888999998 78865 99999999888776
No 217
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=24.63 E-value=1.7e+02 Score=23.76 Aligned_cols=79 Identities=13% Similarity=-0.043 Sum_probs=42.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCcee--------eeecCCCHHHHHHHHHHcCCCEEEEcCCCh
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGL--------HTSGHGYRGELEEVLKLVKPQHFLPIHGEL 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~--------h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~ 202 (221)
+++|.|+...+..+++.. .+...|.+++..+.... ...+.-+.++|.+.++. +++.++-.+-.+
T Consensus 107 ~~gd~vl~~~p~~~~~~~-------~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~n 178 (410)
T 3e2y_A 107 DPGDEVIIMVPFYDCYEP-------MVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS-KTKAIILNTPHN 178 (410)
T ss_dssp CTTCEEEEEESCCTTHHH-------HHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-TEEEEEEESSCT
T ss_pred CCCCEEEEeCCCchhhHH-------HHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC-CceEEEEeCCCC
Confidence 378888887765555432 34456887662111000 01222355555554421 345555322221
Q ss_pred --------HHHHHHHHHHHhcCC
Q 045468 203 --------LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 --------~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 179 ptG~~~~~~~l~~l~~~~~~~~~ 201 (410)
T 3e2y_A 179 PLGKVYTRQELQVIADLCVKHDT 201 (410)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCCcCcCHHHHHHHHHHHHHcCc
Confidence 478888999988874
No 218
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=24.57 E-value=79 Score=26.40 Aligned_cols=72 Identities=14% Similarity=0.063 Sum_probs=41.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEEE--cC---CChH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFLP--IH---GELL 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~iiP--VH---ge~~ 203 (221)
+++|.|+.+... |-.....+...+...|+++. .+... +.+ .+-+.++| +.++- +| |...
T Consensus 103 ~~gd~Vl~~~~~---y~~~~~~~~~~~~~~G~~v~-----~v~~~---d~~---~l~~~i~~~t~~v~~~~p~nptG~~~ 168 (403)
T 3cog_A 103 KAGDQIICMDDV---YGGTNRYFRQVASEFGLKIS-----FVDCS---KIK---LLEAAITPETKLVWIETPTNPTQKVI 168 (403)
T ss_dssp CTTCEEEEESSC---CHHHHHHHHHTGGGGTCEEE-----EECTT---SHH---HHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEeCCC---cchHHHHHHHHHHHcCCEEE-----EECCC---CHH---HHHHhcCcCCeEEEEECCCCCCCeee
Confidence 478888887753 33222223333456788876 23221 444 44455555 44552 12 4555
Q ss_pred HHHHHHHHHHhcC
Q 045468 204 FLKEHELLGRSTG 216 (221)
Q Consensus 204 ~~~~~~~~~~~~g 216 (221)
++.+.++++++.|
T Consensus 169 ~l~~i~~la~~~g 181 (403)
T 3cog_A 169 DIEGCAHIVHKHG 181 (403)
T ss_dssp CHHHHHHHHTSSS
T ss_pred CHHHHHHHHHHcC
Confidence 7888889998887
No 219
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=24.40 E-value=2.5e+02 Score=22.31 Aligned_cols=66 Identities=17% Similarity=0.015 Sum_probs=49.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEe-----ccccHHHHHHHHHHHHHcCCeEEEEcccHH--HHHHHHHHCCC
Q 045468 14 TTSESVVKDALMRHVSAAKGRVITTQ-----FASNIHRLGSVKAAADLTGRKLVFVGMSLR--TYLDAAWKDGK 80 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g~viv~~-----~a~ni~Rl~~i~~~a~~~gR~~vi~~~~~~--~~~~~~~~~g~ 80 (221)
..++.++.+.+...+.+-++.+-|+- |.+|-.-++.+++++++.|- ++++++... ..-+.+.+.|.
T Consensus 106 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL-~FlDS~Ts~~S~a~~~A~~~gv 178 (261)
T 2qv5_A 106 GDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGL-LFLDDGSSAQSLSGGIAKAISA 178 (261)
T ss_dssp TSCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGGCHHHHHHHHHHHHHTTC-EEEECSCCTTCCHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCCC-EEEcCCCCcccHHHHHHHHcCC
Confidence 36899999999999988888777774 67899999999999999885 777765421 12234555554
No 220
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=24.40 E-value=39 Score=29.87 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=27.5
Q ss_pred HHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 152 KMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 152 ~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
..+..|.+.|+++. ++.+| |.+.++++++++.++
T Consensus 35 e~l~~li~aGm~v~-----RlNfS-Hg~~e~h~~~i~~ir 68 (500)
T 1a3w_A 35 ETLVALRKAGLNIV-----RMNFS-HGSYEYHKSVIDNAR 68 (500)
T ss_dssp HHHHHHHHHTCCSE-----ECBTT-SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-----EEECC-CCCHHHHHHHHHHHH
Confidence 34577788899998 78766 999999999987763
No 221
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=24.37 E-value=2.1e+02 Score=22.14 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC--CCEEEEcCCChHHH
Q 045468 149 RVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK--PQHFLPIHGELLFL 205 (221)
Q Consensus 149 ~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~--Pk~iiPVHge~~~~ 205 (221)
.....+....+.|..++ +|+. ...+++.++++... +..+|- |+.....
T Consensus 121 ~f~~~~~~a~~~~lPv~------iH~~--~~~~~~~~il~~~p~~~~~~I~-H~~~g~~ 170 (268)
T 1j6o_A 121 VFVEQIELAGKLNLPLV------VHIR--DAYSEAYEILRTESLPEKRGVI-HAFSSDY 170 (268)
T ss_dssp HHHHHHHHHHHHTCCEE------EEEE--SCHHHHHHHHHHSCCCSSCEEE-TTCCSCH
T ss_pred HHHHHHHHHHHhCCCEE------EEeC--chHHHHHHHHHhcCCCCCCEEE-EcCCCCH
Confidence 45666777778898885 7864 35677888888775 333443 9864433
No 222
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=24.35 E-value=1.7e+02 Score=19.85 Aligned_cols=65 Identities=5% Similarity=0.034 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHhc---CCcEEEEecc------ccHHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHHCCC
Q 045468 15 TSESVVKDALMRHVSAA---KGRVITTQFA------SNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGK 80 (221)
Q Consensus 15 ~sE~~v~~~i~~~~~~~---~g~viv~~~a------~ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~~g~ 80 (221)
.+-..+.+.+.+.+.+. ...|++.+.. +=+.-|..+++.+++.|..+++.+.+- .+.+.+...|+
T Consensus 28 ~~a~~~~~~l~~~~~~~~~~~~~vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~-~v~~~l~~~gl 101 (130)
T 2kln_A 28 ANAEDFRRRALTVVDQDPGQVEWFVLNAESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQ-DLRESLRAASL 101 (130)
T ss_dssp TTHHHHHHHHHHHTTSSSSCCEEEEEECSCCSSSBCSTTTHHHHHHHHHHTTTEEEEEECCSS-HHHHHHHHCTT
T ss_pred chHHHHHHHHHHHHhcCCCCceEEEEECCCCChhhHHHHHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHcCC
Confidence 45677888888876542 3467777642 336778888999999999999987652 44455555553
No 223
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=24.21 E-value=1.8e+02 Score=23.40 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCe
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRK 60 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~ 60 (221)
..|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=.
T Consensus 52 ~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 52 SVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp GSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 45666655555555554444 588888888888888888888888763
No 224
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=24.04 E-value=68 Score=19.70 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCC-ChHHHHHHHHHHHhcCCC
Q 045468 150 VMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHG-ELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 150 ~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHg-e~~~~~~~~~~~~~~g~~ 218 (221)
...+...|.+.|+.+.. ..-|-|-.. ..-.+...||.|+ +-+. .-..++++.+|+.
T Consensus 7 ~~elik~L~~~G~~~~r-----~~GSH~~~~-------~~~~~~~~vP~h~~ei~~-g~lk~Ilkqagl~ 63 (70)
T 1whz_A 7 PEEVARKLRRLGFVERM-----AKGGHRLYT-------HPDGRIVVVPFHSGELPK-GTFKRILRDAGLT 63 (70)
T ss_dssp HHHHHHHHHHTTCEEEE-----EETTEEEEE-------CTTSCEEEEECSSSSCCH-HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEeC-----CCCCCceEe-------cCCCCeeEecCCcCcCCH-HHHHHHHHHcCCC
Confidence 34677889999998762 111212111 1112346799998 5433 3455677788874
No 225
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=24.02 E-value=2.1e+02 Score=20.72 Aligned_cols=55 Identities=9% Similarity=0.070 Sum_probs=30.0
Q ss_pred cCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 130 LTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 130 ~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
++....++|.++...+.......+...+. +..+. ..+.+.|. +.++++.|++.++
T Consensus 115 l~gk~v~~f~t~g~~~~g~a~~~l~~~l~--~~~~~----~g~~~~~~-~~~~i~~Wl~~~~ 169 (171)
T 4ici_A 115 LKGKTVVPFATSGGSSIGNSATVLKKTYP--DLNWK----EGRLLNRT-DEKAIRAWLDVIA 169 (171)
T ss_dssp CTTSEEEEEEECSSCCSHHHHHHHHHHST--TSEEC----CCEECSSC-CHHHHHHHHHHHT
T ss_pred CCcCEEEEEEecCCCCcchHHHHHHHHcC--CCeec----cCeEecCC-CHHHHHHHHHHhC
Confidence 33444667777654444333333334332 45553 24555663 6777888887765
No 226
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=23.93 E-value=1.9e+02 Score=23.54 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=25.2
Q ss_pred HHHHHHHHHHcCCCEEEEcC-----CChHHHHHHHHHHHhcCC
Q 045468 180 RGELEEVLKLVKPQHFLPIH-----GELLFLKEHELLGRSTGI 217 (221)
Q Consensus 180 ~~dL~~~i~~i~Pk~iiPVH-----ge~~~~~~~~~~~~~~g~ 217 (221)
.++|++.+.. +++.++..| |-...+.+.++++++.|+
T Consensus 155 ~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 196 (416)
T 1qz9_A 155 PEELPQAIDQ-DTAVVMLTHVNYKTGYMHDMQALTALSHECGA 196 (416)
T ss_dssp GGGHHHHCST-TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhCC-CceEEEEeccccCcccccCHHHHHHHHHHcCC
Confidence 6777766543 566777666 444467888888888874
No 227
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=23.71 E-value=1.5e+02 Score=24.18 Aligned_cols=24 Identities=8% Similarity=-0.135 Sum_probs=20.5
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEcc
Q 045468 43 NIHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 43 ni~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
+.++++.|.++|++.|-.+++|..
T Consensus 181 ~~~~l~~l~~~~~~~~~~li~De~ 204 (397)
T 2zyj_A 181 PLPARKRLLQMVMERGLVVVEDDA 204 (397)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECT
T ss_pred CHHHHHHHHHHHHHcCCEEEEeCC
Confidence 478999999999999988888753
No 228
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=23.66 E-value=1.2e+02 Score=23.05 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhcCCcEEEEecc---ccHHHHHHHHHHHHHcCCeEEEEcccH
Q 045468 19 VVKDALMRHVSAAKGRVITTQFA---SNIHRLGSVKAAADLTGRKLVFVGMSL 68 (221)
Q Consensus 19 ~v~~~i~~~~~~~~g~viv~~~a---~ni~Rl~~i~~~a~~~gR~~vi~~~~~ 68 (221)
--...+.-++.+.+..++|..|+ .--+|+++++.++++.||.+.+...+.
T Consensus 38 ~~~~a~~~l~~s~~~~~iv~g~ggs~~~~~~~a~L~~~a~~~Gr~V~vLAp~~ 90 (189)
T 2l8b_A 38 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 90 (189)
T ss_dssp HHHHHHHHHHHHSCCEECCBCSSCSHHHHHHHHHHHHHHHHTTCCEEEECSTT
T ss_pred cchhHHHHHhccCCceEEEecccchHHHHHHHHHHHHHHHhcCeEEEEEcCch
Confidence 34555666666767777877775 356788899999999999999886554
No 229
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=23.38 E-value=1.3e+02 Score=24.98 Aligned_cols=43 Identities=14% Similarity=0.061 Sum_probs=28.3
Q ss_pred HHHHHHhcCCcEEEEeccccH-------HHHHHHHHHHHHcCCeEEEEcc
Q 045468 24 LMRHVSAAKGRVITTQFASNI-------HRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 24 i~~~~~~~~g~viv~~~a~ni-------~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
+.+.+.+.+-.+++.+..+|- +.++.+.++|++.|-.+++|..
T Consensus 186 le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~ 235 (421)
T 3l8a_A 186 LEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEI 235 (421)
T ss_dssp HHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 344443223345555666553 6799999999999988888754
No 230
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=23.31 E-value=2.8e+02 Score=21.92 Aligned_cols=92 Identities=8% Similarity=-0.087 Sum_probs=0.0
Q ss_pred CCCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeee--ec
Q 045468 99 PKDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHT--SG 176 (221)
Q Consensus 99 ~~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~--SG 176 (221)
+...+++++|...-....+.-+ |.|+...+..++ ..+.+...|++++ .+.. .+
T Consensus 77 ~~~~i~~~~g~t~al~~~~~~~-------------d~vi~~~~~~~~-------~~~~~~~~g~~~~-----~~~~~~~~ 131 (361)
T 3ftb_A 77 KDIGIVLGNGASEIIELSISLF-------------EKILIIVPSYAE-------YEINAKKHGVSVV-----FSYLDENM 131 (361)
T ss_dssp CSCEEEEESSHHHHHHHHHTTC-------------SEEEEEESCCTH-------HHHHHHHTTCEEE-----EEECCTTS
T ss_pred CcceEEEcCCHHHHHHHHHHHc-------------CcEEEecCChHH-------HHHHHHHcCCeEE-----EeecCccc
Q ss_pred CCCHHHHHHHHHHcCCCEEEEcCCChH--------HHHHHHHHHHhcCC
Q 045468 177 HGYRGELEEVLKLVKPQHFLPIHGELL--------FLKEHELLGRSTGI 217 (221)
Q Consensus 177 HA~~~dL~~~i~~i~Pk~iiPVHge~~--------~~~~~~~~~~~~g~ 217 (221)
+-+.++|++.++. ++.++-.|-.+| ++.+.++++++.|+
T Consensus 132 ~~~~~~l~~~l~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 178 (361)
T 3ftb_A 132 CIDYEDIISKIDD--VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKK 178 (361)
T ss_dssp CCCHHHHHHHTTT--CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCC
No 231
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=23.25 E-value=48 Score=28.59 Aligned_cols=79 Identities=13% Similarity=-0.040 Sum_probs=43.7
Q ss_pred EEEEEecCCC-----CcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHH--------HcCCCEEEEcCCC
Q 045468 135 VILYSAKVIP-----GNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLK--------LVKPQHFLPIHGE 201 (221)
Q Consensus 135 ~vI~s~~~~p-----g~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~--------~i~Pk~iiPVHge 201 (221)
.+|+-...+. |.=.....-++.|..+|+..++..-..-+.|++...-+...+.. .++|+ -|.
T Consensus 5 ~vi~q~f~w~~~~~gG~~~gi~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~-----~Gt 79 (480)
T 1ud2_A 5 GTMMQYYEWHLENDGQHWNRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTK-----YGT 79 (480)
T ss_dssp CCEEECCCTTCCCSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCS-----SCC
T ss_pred ceEEEeeeccCCCCCCcHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCC-----CCC
Confidence 3566655542 32233333457999999988854321222333222222222221 24555 478
Q ss_pred hHHHHHHHHHHHhcCCC
Q 045468 202 LLFLKEHELLGRSTGIR 218 (221)
Q Consensus 202 ~~~~~~~~~~~~~~g~~ 218 (221)
..++.++++.|++.|+.
T Consensus 80 ~~df~~lv~~aH~~Gi~ 96 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDIN 96 (480)
T ss_dssp HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHCCCE
Confidence 88999999999998863
No 232
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=23.18 E-value=3.1e+02 Score=22.45 Aligned_cols=73 Identities=8% Similarity=0.030 Sum_probs=41.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC--CEEEE--cC---CChH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP--QHFLP--IH---GELL 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P--k~iiP--VH---ge~~ 203 (221)
+++|.||.+....++ ....+...+...|+++. .+.. .+.++ +-+.++| +.++- ++ |...
T Consensus 103 ~~gd~Vi~~~~~y~~---~~~~~~~~~~~~g~~~~-----~v~~---~d~~~---l~~~i~~~~~~v~~~~~~nptG~~~ 168 (392)
T 3qhx_A 103 RPGDHVVIPDDAYGG---TFRLIDKVFTGWNVEYT-----PVAL---ADLDA---VRAAIRPTTRLIWVETPTNPLLSIA 168 (392)
T ss_dssp CTTCEEEEETTCCHH---HHHHHHHTGGGGTCEEE-----EECT---TCHHH---HHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred CCCCEEEEeCCCcch---HHHHHHHHHHhcCcEEE-----EeCC---CCHHH---HHHhhCCCCeEEEEECCCCCCcEEe
Confidence 378888877654333 22233344567788776 2221 14444 4455544 45551 22 3445
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
++.+.++++++.|+
T Consensus 169 ~l~~i~~la~~~g~ 182 (392)
T 3qhx_A 169 DIAGIAQLGADSSA 182 (392)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHcCC
Confidence 68888899998885
No 233
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=23.17 E-value=1.1e+02 Score=24.64 Aligned_cols=46 Identities=9% Similarity=-0.090 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCe
Q 045468 14 TTSESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRK 60 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~ 60 (221)
+.|.+|=.+-++.+++..+| |++.+.+.+.....++.+.|++.|=.
T Consensus 48 ~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gad 93 (293)
T 1w3i_A 48 SLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIV 93 (293)
T ss_dssp GSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCS
T ss_pred hCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 46766666666666655667 99999998999988999999998873
No 234
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=23.15 E-value=74 Score=27.80 Aligned_cols=43 Identities=9% Similarity=0.064 Sum_probs=33.4
Q ss_pred ecCCCHHHHHHHHHHcCCCEEEEcCCCh---HHHHHHHHHHHhcCC
Q 045468 175 SGHGYRGELEEVLKLVKPQHFLPIHGEL---LFLKEHELLGRSTGI 217 (221)
Q Consensus 175 SGHA~~~dL~~~i~~i~Pk~iiPVHge~---~~~~~~~~~~~~~g~ 217 (221)
.|+-+.++|.+.+..-+||.++--.+-+ .++.+.+++|++.|.
T Consensus 187 ~~~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~ 232 (490)
T 2a7v_A 187 TGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKA 232 (490)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTC
T ss_pred cCCcCHHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCC
Confidence 5899999999999888999777433333 257888889999884
No 235
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=23.09 E-value=3.3e+02 Score=22.69 Aligned_cols=137 Identities=15% Similarity=0.058 Sum_probs=70.6
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEcccHHHHHHHHHHCC--CCCCCCCCccChhhhhhc-CCCCEEEEecCCC--ccHHHHH
Q 045468 43 NIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDG--KAPIDPSTLVKVEDIDAY-APKDLLIVTTGSQ--AEPRAAL 117 (221)
Q Consensus 43 ni~Rl~~i~~~a~~~gR~~vi~~~~~~~~~~~~~~~g--~~~~~~~~~v~~~~~~~~-~~~~~vi~~~g~~--~e~~~~l 117 (221)
..+=+..+.++|+++|-.++-...+. .-++.+.+.+ .++.........+-++.. ...+-+++.||+. .|.....
T Consensus 89 ~~e~~~~L~~~~~~~Gi~~~st~~d~-~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Av 167 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFISTLFSR-AAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSV 167 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSH-HHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEeeCCH-HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHH
Confidence 35677889999999999877665554 3334443322 222221111222222211 1123388899984 3333333
Q ss_pred HHHh-cCCCCCcccCCCCEEEE---EecCCCCcHHHHHHHHHHHHH-c-CCeEEecCCceeeeecCCCHHHHHHHHHHcC
Q 045468 118 NLAS-YGGSHSLKLTNEDVILY---SAKVIPGNESRVMKMLNRISE-I-GSTIVMGRNEGLHTSGHGYRGELEEVLKLVK 191 (221)
Q Consensus 118 ~~~~-~~~~~~~~~~~~~~vI~---s~~~~pg~e~~~~~~~~~l~~-~-g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~ 191 (221)
.-+. .+ . +.+++ |+|+.|=++-.. ..+..|.+ + +++|. .|+|+....+-...-.+.
T Consensus 168 e~i~~~G--------~-~iiLlhc~s~Yp~~~~~~nL-~ai~~lk~~f~~lpVg--------~sdHt~G~~~~~AAvAlG 229 (349)
T 2wqp_A 168 EIIREAG--------V-PYALLHCTNIYPTPYEDVRL-GGMNDLSEAFPDAIIG--------LSDHTLDNYACLGAVALG 229 (349)
T ss_dssp HHHHHHT--------C-CEEEEECCCCSSCCGGGCCT-HHHHHHHHHCTTSEEE--------EECCSSSSHHHHHHHHHT
T ss_pred HHHHHcC--------C-CEEEEeccCCCCCChhhcCH-HHHHHHHHHCCCCCEE--------eCCCCCcHHHHHHHHHhC
Confidence 3322 22 1 45553 333333122122 22344444 4 56553 488887777766666777
Q ss_pred CCEEEEcC
Q 045468 192 PQHFLPIH 199 (221)
Q Consensus 192 Pk~iiPVH 199 (221)
.+ +|=+|
T Consensus 230 A~-iIEkH 236 (349)
T 2wqp_A 230 GS-ILERH 236 (349)
T ss_dssp CC-EEEEE
T ss_pred CC-EEEeC
Confidence 77 77777
No 236
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=23.09 E-value=1.5e+02 Score=23.85 Aligned_cols=48 Identities=19% Similarity=0.060 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCeE
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRKL 61 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~~ 61 (221)
..|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|++.|=.-
T Consensus 61 ~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gada 110 (301)
T 1xky_A 61 TLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDA 110 (301)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSE
T ss_pred hCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCE
Confidence 35555544444444443333 6888888888999889999999988743
No 237
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=22.92 E-value=2.9e+02 Score=22.08 Aligned_cols=72 Identities=19% Similarity=0.160 Sum_probs=43.6
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCC-CEEEEcC------CChH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKP-QHFLPIH------GELL 203 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~P-k~iiPVH------ge~~ 203 (221)
+++|.|++..+. +- .....+...|++++ .+. +.+.++|.+.++...+ +.+|.+. |...
T Consensus 121 ~~gd~v~~~~~~---~~----~~~~~~~~~g~~~~-----~~~---~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~ 185 (384)
T 1bs0_A 121 AKEDRIAADRLS---HA----SLLEAASLSPSQLR-----RFA---HNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSA 185 (384)
T ss_dssp CTTCEEEEETTC---CH----HHHHHHHTSSSEEE-----EEC---TTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBC
T ss_pred CCCcEEEEcccc---cH----HHHHHHHHcCCCEE-----EeC---CCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCcc
Confidence 378887776543 22 22234455788776 221 4578888888876532 3343332 4444
Q ss_pred HHHHHHHHHHhcCC
Q 045468 204 FLKEHELLGRSTGI 217 (221)
Q Consensus 204 ~~~~~~~~~~~~g~ 217 (221)
.+.+.++++++.|+
T Consensus 186 ~l~~i~~l~~~~~~ 199 (384)
T 1bs0_A 186 PLAEIQQVTQQHNG 199 (384)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCc
Confidence 57888889988874
No 238
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=22.83 E-value=1.3e+02 Score=25.31 Aligned_cols=46 Identities=7% Similarity=0.003 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEEEEc
Q 045468 18 SVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVG 65 (221)
Q Consensus 18 ~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi~~ 65 (221)
..+.+.+... . .++..+-.+-..|++-++.++++|.+.+-++++-.
T Consensus 15 ~~~~~ll~~A-~-~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~ 60 (358)
T 1dos_A 15 DDVQKVFQVA-K-ENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQF 60 (358)
T ss_dssp HHHHHHHHHH-H-HTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hHHHHHHHHH-H-HCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEC
Confidence 3444444443 2 24666655556789999999999999999888853
No 239
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=22.77 E-value=1.7e+02 Score=20.91 Aligned_cols=53 Identities=8% Similarity=0.110 Sum_probs=36.3
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL 189 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~ 189 (221)
..-..+|.++.+.|. ....+.+.|...|++++. ..+..-|+++.+|+.+..+.
T Consensus 87 ~k~va~fgs~g~~~~--a~~~l~~~l~~~G~~~v~---~~~~~~~~P~~~dl~~~~~~ 139 (159)
T 3fni_A 87 KQAVGIFETGGGDDE--PIDPLLSKFRNLGLTTAF---PAIRIKQTPTENTYKLCEEA 139 (159)
T ss_dssp TSEEEEECCSSSCBC--CHHHHHHHHHHTTCEESS---SCBCCSSCCCHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCcH--HHHHHHHHHHHCCCEEec---CceEEEeCCCHHHHHHHHHH
Confidence 344568888766542 234567788889998872 23567889999998876543
No 240
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=22.53 E-value=94 Score=25.16 Aligned_cols=23 Identities=9% Similarity=0.014 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHcCCeEEEEccc
Q 045468 45 HRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 45 ~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
+.++.+.++|++.|-.+++|...
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~ 206 (391)
T 4dq6_A 184 DELKKLGDICLKHNVKIISDEIH 206 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHHcCCEEEeeccc
Confidence 88999999999999988888543
No 241
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.27 E-value=78 Score=21.30 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=22.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCcEE
Q 045468 8 VLSPGRTTSESVVKDALMRHVSAAKGRVI 36 (221)
Q Consensus 8 ~~~~~~~~sE~~v~~~i~~~~~~~~g~vi 36 (221)
+.......++.+|.+.+.++|.+.+|.|+
T Consensus 14 V~NL~~~~~~~~lk~~L~~lF~~yGG~Vl 42 (96)
T 2diu_A 14 VYNLPANKDGKSVSNRLRRLSDNCGGKVL 42 (96)
T ss_dssp EESCCTTSCHHHHHHHHHHHHHTTTCCEE
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHcCCeeE
Confidence 44455678999999999999988755654
No 242
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=22.22 E-value=2.9e+02 Score=22.57 Aligned_cols=82 Identities=17% Similarity=0.203 Sum_probs=58.2
Q ss_pred CCEEEEEecCCCCcH-HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CC---EEEEcCC--ChH
Q 045468 133 EDVILYSAKVIPGNE-SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQ---HFLPIHG--ELL 203 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e-~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk---~iiPVHg--e~~ 203 (221)
+..+.|+..-..-.+ ....++...+.+.|++.+. ...+.|-+.|.+..++++.++ |. .-|=+|+ ..-
T Consensus 135 g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~----l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~G 210 (325)
T 3eeg_A 135 VHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVN----IPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLG 210 (325)
T ss_dssp SSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEE----CCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTS
T ss_pred CCEEEEEccccccchHHHHHHHHHHHHhcCCCEEE----ecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCC
Confidence 445666654221133 3456778888899998773 567899999999999999884 42 5566676 566
Q ss_pred HHHHHHHHHHhcCCC
Q 045468 204 FLKEHELLGRSTGIR 218 (221)
Q Consensus 204 ~~~~~~~~~~~~g~~ 218 (221)
...+++-.|.+.|..
T Consensus 211 lA~AN~laA~~aGa~ 225 (325)
T 3eeg_A 211 LATANSLAALQNGAR 225 (325)
T ss_dssp CHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCC
Confidence 777787788888864
No 243
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=22.08 E-value=67 Score=27.27 Aligned_cols=20 Identities=10% Similarity=0.087 Sum_probs=9.0
Q ss_pred HHHHHHHHHcCCCEEEEcCC
Q 045468 181 GELEEVLKLVKPQHFLPIHG 200 (221)
Q Consensus 181 ~dL~~~i~~i~Pk~iiPVHg 200 (221)
+.|.++++..++..++|.+|
T Consensus 64 ~~l~~~~~~~~~d~v~~~~g 83 (449)
T 2w70_A 64 PAIISAAEITGAVAIHPGYG 83 (449)
T ss_dssp HHHHHHHHHHTCCEEECCSS
T ss_pred HHHHHHHHHcCCCEEEECCC
Confidence 44444444444444444443
No 244
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=22.07 E-value=1.9e+02 Score=19.59 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=35.4
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVL 187 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i 187 (221)
+.....+|.++.+.+ ......+.+.|...|++++. ..+.+-|+++.+| .++-
T Consensus 78 ~~k~~~~f~t~g~~~-~~a~~~l~~~l~~~G~~~v~---~~~~~~~~p~~~d-~~~~ 129 (138)
T 5nul_A 78 SGKKVALFGSYGWGD-GKWMRDFEERMNGYGCVVVE---TPLIVQNEPDEAE-QDCI 129 (138)
T ss_dssp TTCEEEEEEEESSSC-SHHHHHHHHHHHHTTCEECS---CCEEEESSCGGGH-HHHH
T ss_pred CCCEEEEEEecCCCC-ChHHHHHHHHHHHCCCEEEC---CceEEecCCCHHH-HHHH
Confidence 345566888776542 23345788899999998872 2477788888877 5543
No 245
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=22.06 E-value=2.5e+02 Score=21.27 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC--CCEEEEcCCC
Q 045468 149 RVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK--PQHFLPIHGE 201 (221)
Q Consensus 149 ~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~--Pk~iiPVHge 201 (221)
....++....+.|..+. +|+.. + .+++..+++... +-.+| +|..
T Consensus 110 ~~~~~~~~a~~~~~pv~------iH~~~-~-~~~~~~~l~~~p~~~~~~i-~H~~ 155 (265)
T 2gzx_A 110 VFRKQIALAKRLKLPII------IHNRE-A-TQDCIDILLEEHAEEVGGI-MHSF 155 (265)
T ss_dssp HHHHHHHHHHHHTCCEE------EEEES-C-HHHHHHHHHHTTGGGTCEE-ETTC
T ss_pred HHHHHHHHHHHcCCcEE------EEecc-c-HHHHHHHHHhcCCCCCcEE-EEcC
Confidence 35556666667777664 66532 2 466777777664 23444 5654
No 246
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=22.01 E-value=66 Score=27.34 Aligned_cols=14 Identities=0% Similarity=0.062 Sum_probs=6.7
Q ss_pred HHHHHHHHcCCeEE
Q 045468 152 KMLNRISEIGSTIV 165 (221)
Q Consensus 152 ~~~~~l~~~g~~v~ 165 (221)
.+.+...+.+++.+
T Consensus 69 ~l~~~~~~~~~d~i 82 (446)
T 3ouz_A 69 AIIAAAEIAEADAI 82 (446)
T ss_dssp HHHHHHHHHTCSEE
T ss_pred HHHHHHHHhCcCEE
Confidence 34444555555443
No 247
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=21.82 E-value=2.7e+02 Score=21.36 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=45.1
Q ss_pred CCEEEEecCCCccHHHHHHHHhcCCCCCcccCCCC-EEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCC
Q 045468 100 KDLLIVTTGSQAEPRAALNLASYGGSHSLKLTNED-VILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHG 178 (221)
Q Consensus 100 ~~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~-~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA 178 (221)
.++.|+++|+.....+.+..+..+. + +.. ..++|..+ +-.. ..+-.+.|++++......+
T Consensus 9 ~ri~vl~SG~gsnl~all~~~~~~~-----~-~~~I~~Vis~~~--~a~~-----l~~A~~~gIp~~~~~~~~~------ 69 (215)
T 3kcq_A 9 LRVGVLISGRGSNLEALAKAFSTEE-----S-SVVISCVISNNA--EARG-----LLIAQSYGIPTFVVKRKPL------ 69 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHTCCC------C-SEEEEEEEESCT--TCTH-----HHHHHHTTCCEEECCBTTB------
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCC-----C-CcEEEEEEeCCc--chHH-----HHHHHHcCCCEEEeCcccC------
Confidence 3678889998544455555543321 1 112 33566542 2111 2456678998762110011
Q ss_pred CHHHHHHHHHHcCCCEEEEcC
Q 045468 179 YRGELEEVLKLVKPQHFLPIH 199 (221)
Q Consensus 179 ~~~dL~~~i~~i~Pk~iiPVH 199 (221)
..+++.+.++..+|+.+|-+.
T Consensus 70 ~~~~~~~~L~~~~~Dlivlag 90 (215)
T 3kcq_A 70 DIEHISTVLREHDVDLVCLAG 90 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEESS
T ss_pred ChHHHHHHHHHhCCCEEEEeC
Confidence 127888999999999888663
No 248
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=21.71 E-value=1.5e+02 Score=24.30 Aligned_cols=73 Identities=10% Similarity=0.017 Sum_probs=42.0
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee--cCCC-HHHHHHHHHHcCCCEEEEcCCCh------
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS--GHGY-RGELEEVLKLVKPQHFLPIHGEL------ 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S--GHA~-~~dL~~~i~~i~Pk~iiPVHge~------ 202 (221)
++|.|+......+++.. .+...|++++. +... ..-. .++|++.++. +++.++-.|-.+
T Consensus 125 ~gd~Vl~~~~~~~~~~~-------~~~~~g~~~~~-----v~~~~~~~~~~~~~l~~~l~~-~~~~v~~~~p~nptG~~~ 191 (409)
T 2gb3_A 125 PGDEILVLEPFYANYNA-------FAKIAGVKLIP-----VTRRMEEGFAIPQNLESFINE-RTKGIVLSNPCNPTGVVY 191 (409)
T ss_dssp TTCEEEEEESCCTHHHH-------HHHHHTCEEEE-----EECCGGGTSCCCTTGGGGCCT-TEEEEEEESSCTTTCCCC
T ss_pred CCCEEEEcCCCchhHHH-------HHHHcCCEEEE-----eccCCCCCCccHHHHHHhhCc-CCeEEEECCCCCCCCCCc
Confidence 78888888775554332 24456887762 2111 1111 4555554432 566666555221
Q ss_pred --HHHHHHHHHHHhcCC
Q 045468 203 --LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 --~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 192 ~~~~l~~i~~~~~~~~~ 208 (409)
T 2gb3_A 192 GKDEMRYLVEIAERHGL 208 (409)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 468888999998874
No 249
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=21.71 E-value=2.3e+02 Score=23.90 Aligned_cols=79 Identities=11% Similarity=0.019 Sum_probs=48.0
Q ss_pred CCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHH-HH---cCCCEEEEcC-----CCh
Q 045468 132 NEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVL-KL---VKPQHFLPIH-----GEL 202 (221)
Q Consensus 132 ~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i-~~---i~Pk~iiPVH-----ge~ 202 (221)
+++.+|++....+. ....+...|+++...+.....-.|+-+.++|++.+ +. -++..++... |..
T Consensus 175 ~~~~vi~~~~~h~s-------~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i 247 (456)
T 2z67_A 175 GSNVVIYPYASHKS-------PIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS 247 (456)
T ss_dssp CCCEEEEECCCCHH-------HHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC
T ss_pred CCCEEEEECCCcHH-------HHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc
Confidence 35667777653222 22334457887763221111236789999999999 43 3555554443 445
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
..+.+.++++++.|+
T Consensus 248 ~~l~~I~~la~~~g~ 262 (456)
T 2z67_A 248 DDIVEIAKICENYDI 262 (456)
T ss_dssp CCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 678888899998875
No 250
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=21.65 E-value=97 Score=26.63 Aligned_cols=82 Identities=13% Similarity=0.057 Sum_probs=50.0
Q ss_pred CCCCEEEEEecCCCCcHHHHHH----HHHHHHHcCCeEEecCCceee-eecCCCHHHHHHHHHHcCCCEEEEcCCCh---
Q 045468 131 TNEDVILYSAKVIPGNESRVMK----MLNRISEIGSTIVMGRNEGLH-TSGHGYRGELEEVLKLVKPQHFLPIHGEL--- 202 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~----~~~~l~~~g~~v~~~~~~~~h-~SGHA~~~dL~~~i~~i~Pk~iiPVHge~--- 202 (221)
++||.|+.+....+|+-..... ..+ +.-..+.++.. .+. -.|+-+.++|++.+..-+||.++. |.-.
T Consensus 132 ~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~-~~G~~~~~v~~---~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~~ 206 (483)
T 1rv3_A 132 EPHGRIMGLDLPDGGHLTHGFMTDKKKIS-ATSIFFESMAY---KVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYSR 206 (483)
T ss_dssp CTTCEEEEECGGGTCCGGGCCBCSSCBCS-HHHHHSEEEEE---CBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCCS
T ss_pred CCCCEEEEecCccCcCcchhhhhcccCcc-cccceEEEEEC---ccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCCC
Confidence 4899998887655554211000 000 00011344311 011 247889999999998779999888 6632
Q ss_pred -HHHHHHHHHHHhcCC
Q 045468 203 -LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 -~~~~~~~~~~~~~g~ 217 (221)
.++.+.+++|++.|+
T Consensus 207 ~~dl~~i~~ia~~~g~ 222 (483)
T 1rv3_A 207 NLDYGRLRKIADENGA 222 (483)
T ss_dssp CCCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHcCC
Confidence 367888899999885
No 251
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=21.45 E-value=2.2e+02 Score=23.88 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=58.9
Q ss_pred CCEEEEEecCCCCcH-HHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CC---EEEEcCC--ChH
Q 045468 133 EDVILYSAKVIPGNE-SRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQ---HFLPIHG--ELL 203 (221)
Q Consensus 133 ~~~vI~s~~~~pg~e-~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk---~iiPVHg--e~~ 203 (221)
+..+.|+..-..-.+ ....++...+.+.|++.+. ...+-|-+.|.+..++++.++ |. ..|=+|+ +.-
T Consensus 141 g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~----l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~G 216 (370)
T 3rmj_A 141 TDDVEFSCEDALRSEIDFLAEICGAVIEAGATTIN----IPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLG 216 (370)
T ss_dssp CSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEE----EECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTS
T ss_pred CCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEE----ecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCC
Confidence 334667654222233 3456778888999998773 677999999999999999884 43 4566666 666
Q ss_pred HHHHHHHHHHhcCCC
Q 045468 204 FLKEHELLGRSTGIR 218 (221)
Q Consensus 204 ~~~~~~~~~~~~g~~ 218 (221)
...+++-.|.+.|..
T Consensus 217 lAvAN~laAv~aGa~ 231 (370)
T 3rmj_A 217 LAVANSLAALKGGAR 231 (370)
T ss_dssp CHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHhCCC
Confidence 788888888899974
No 252
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=21.44 E-value=2.6e+02 Score=20.96 Aligned_cols=10 Identities=30% Similarity=0.454 Sum_probs=4.0
Q ss_pred HHHHHcCCeE
Q 045468 155 NRISEIGSTI 164 (221)
Q Consensus 155 ~~l~~~g~~v 164 (221)
..+.+.|..+
T Consensus 24 ~~~~~~g~~~ 33 (276)
T 3ksm_A 24 KAADEAGVTL 33 (276)
T ss_dssp HHHHHHTCEE
T ss_pred HHHHHcCCEE
Confidence 3333444433
No 253
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=21.44 E-value=2.7e+02 Score=21.38 Aligned_cols=79 Identities=14% Similarity=0.186 Sum_probs=43.4
Q ss_pred CEEEEecCCCccHHHHHHHHhcCCCCCcccCCCC-EEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCC
Q 045468 101 DLLIVTTGSQAEPRAALNLASYGGSHSLKLTNED-VILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGY 179 (221)
Q Consensus 101 ~~vi~~~g~~~e~~~~l~~~~~~~~~~~~~~~~~-~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~ 179 (221)
++++++||+...+.+.+... .+ .+ +.. ..++|....+ ...+-.+.|++++ ........+
T Consensus 14 ri~vl~SG~gsnl~all~~~-~~-----~~-~~eI~~Vis~~~a~--------~~~~A~~~gIp~~-----~~~~~~~~~ 73 (215)
T 3da8_A 14 RLVVLASGTGSLLRSLLDAA-VG-----DY-PARVVAVGVDRECR--------AAEIAAEASVPVF-----TVRLADHPS 73 (215)
T ss_dssp EEEEEESSCCHHHHHHHHHS-ST-----TC-SEEEEEEEESSCCH--------HHHHHHHTTCCEE-----ECCGGGSSS
T ss_pred EEEEEEeCChHHHHHHHHHH-hc-----cC-CCeEEEEEeCCchH--------HHHHHHHcCCCEE-----EeCcccccc
Confidence 57888998844344444432 11 11 112 3355554321 2455667888876 222223444
Q ss_pred H----HHHHHHHHHcCCCEEEEcC
Q 045468 180 R----GELEEVLKLVKPQHFLPIH 199 (221)
Q Consensus 180 ~----~dL~~~i~~i~Pk~iiPVH 199 (221)
+ +++.+.++..+|+.+|-+.
T Consensus 74 r~~~d~~~~~~l~~~~~Dlivlag 97 (215)
T 3da8_A 74 RDAWDVAITAATAAHEPDLVVSAG 97 (215)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred hhhhhHHHHHHHHhhCCCEEEEcC
Confidence 4 4577788888999887654
No 254
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=21.43 E-value=1.7e+02 Score=24.20 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=40.2
Q ss_pred CCCCEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcC-----CChHHH
Q 045468 131 TNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIH-----GELLFL 205 (221)
Q Consensus 131 ~~~~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVH-----ge~~~~ 205 (221)
+++|.|+.+... +-.....+...+...|++++ .+.. +.++|++.++. +++.++--+ |...++
T Consensus 93 ~~gd~vi~~~~~---~~~~~~~~~~~~~~~g~~~~-----~~~~----~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l 159 (412)
T 2cb1_A 93 RPGDEVVAAKGL---FGQTIGLFGQVLSLMGVTVR-----YVDP----EPEAVREALSA-KTRAVFVETVANPALLVPDL 159 (412)
T ss_dssp CTTCEEEEETTC---CHHHHHHHHHTTTTTTCEEE-----EECS----SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCH
T ss_pred CCCCEEEEeCCC---chhHHHHHHHHHHHcCCEEE-----EECC----CHHHHHHHhcc-CCeEEEEeCCCCCCcccccH
Confidence 478888777653 33222222223456788776 3322 25555544421 334444322 334568
Q ss_pred HHHHHHHHhcCC
Q 045468 206 KEHELLGRSTGI 217 (221)
Q Consensus 206 ~~~~~~~~~~g~ 217 (221)
.+.++++++.|+
T Consensus 160 ~~i~~l~~~~~~ 171 (412)
T 2cb1_A 160 EALATLAEEAGV 171 (412)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 888899988874
No 255
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=21.39 E-value=2.2e+02 Score=23.04 Aligned_cols=64 Identities=19% Similarity=0.110 Sum_probs=35.5
Q ss_pred CEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHH--cCCCEEEEcCCChHH
Q 045468 134 DVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKL--VKPQHFLPIHGELLF 204 (221)
Q Consensus 134 ~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~--i~Pk~iiPVHge~~~ 204 (221)
..+.+++...|-..+....+...+.+.|+.+ .+.++|-. ++.++.+.+. ......|.+||-.++
T Consensus 143 ~~v~~sggGEPll~~~l~~ll~~~~~~g~~i------~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e 208 (342)
T 2yx0_A 143 THAAISLSGEPMLYPYMGDLVEEFHKRGFTT------FIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIE 208 (342)
T ss_dssp CEEEECSSSCGGGSTTHHHHHHHHHHTTCEE------EEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHH
T ss_pred CEEEEcCCCcccchhhHHHHHHHHHHCCCcE------EEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHH
Confidence 3466663334421124556667777777755 36677766 4445555542 234577778875443
No 256
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=21.24 E-value=2.2e+02 Score=22.49 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=13.5
Q ss_pred HHHHHHHHHHcCCC-EEEEcCCChHHHHHHHH
Q 045468 180 RGELEEVLKLVKPQ-HFLPIHGELLFLKEHEL 210 (221)
Q Consensus 180 ~~dL~~~i~~i~Pk-~iiPVHge~~~~~~~~~ 210 (221)
+.++..+++.. |+ .+|-.|+..+......+
T Consensus 171 p~~~~~v~~~~-P~l~ivl~H~G~~~~~~~~~ 201 (291)
T 3irs_A 171 PEHIDRVLGDF-PDLTVVSSHGNWPWVQEIIH 201 (291)
T ss_dssp HHHHHHHHHHC-TTCCEEEEGGGTTCHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEeecCCcccHHHHHH
Confidence 34555555544 32 34445555444333333
No 257
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.10 E-value=1.8e+02 Score=23.37 Aligned_cols=48 Identities=21% Similarity=0.089 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCeE
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRKL 61 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~~ 61 (221)
+.|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|++.|=.-
T Consensus 56 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gada 105 (297)
T 3flu_A 56 TLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADY 105 (297)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSE
T ss_pred cCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCE
Confidence 45666655555555444333 6888889889999999999999998733
No 258
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=21.07 E-value=1.1e+02 Score=26.46 Aligned_cols=23 Identities=13% Similarity=-0.203 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEEcc
Q 045468 44 IHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 44 i~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
.++++.|+++|++.|-.+++|..
T Consensus 254 ~~~l~~i~~la~~~~~~li~De~ 276 (498)
T 3ihj_A 254 RKCIEDVIHFAWEEKLFLLADEV 276 (498)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHHHHHHcCcEEEEEcC
Confidence 48999999999999988887743
No 259
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=21.04 E-value=2.5e+02 Score=22.08 Aligned_cols=55 Identities=15% Similarity=0.195 Sum_probs=34.1
Q ss_pred CCCCCHHHHHHHHHHHHH--hcCCcEEEEec---cccHHHHHHHHHHHHHcCCeEEEEccc
Q 045468 12 GRTTSESVVKDALMRHVS--AAKGRVITTQF---ASNIHRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 12 ~~~~sE~~v~~~i~~~~~--~~~g~viv~~~---a~ni~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
+...++.++ +.+.+.+. .....+++..+ ..+.+-+..+++.|++.|.+++++...
T Consensus 110 g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~ 169 (309)
T 3umo_A 110 GAALNEDEF-RQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG 169 (309)
T ss_dssp CCCCCHHHH-HHHHHHHTTSCTTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCH
T ss_pred CCCCCHHHH-HHHHHHHHhcCCCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCc
Confidence 334566666 34444443 22235555543 224577888999999999989888653
No 260
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=20.98 E-value=70 Score=27.16 Aligned_cols=14 Identities=21% Similarity=0.280 Sum_probs=6.6
Q ss_pred HHHHHHHHcCCeEE
Q 045468 152 KMLNRISEIGSTIV 165 (221)
Q Consensus 152 ~~~~~l~~~g~~v~ 165 (221)
.+.+...+.+++.+
T Consensus 64 ~l~~~~~~~~~d~v 77 (451)
T 2vpq_A 64 NILSIATSTGCDGV 77 (451)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEE
Confidence 34444445555443
No 261
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=20.96 E-value=2.5e+02 Score=23.06 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccccHHHHHHHHHHHHHcCCeEEE
Q 045468 16 SESVVKDALMRHVSAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVF 63 (221)
Q Consensus 16 sE~~v~~~i~~~~~~~~g~viv~~~a~ni~Rl~~i~~~a~~~gR~~vi 63 (221)
....+.+.+.+++.+++..|.+.+....++.+...++.|.+.|-.+.+
T Consensus 116 G~~~I~~ri~eli~~A~~eI~i~~~~~~l~~l~~~L~~a~~RGV~Vrv 163 (342)
T 3qph_A 116 SFDEAIEMFRESLYSAKNEVIVVTPSEFFETIREDLIKTLERGVTVSL 163 (342)
T ss_dssp SHHHHHHHHHHHHHHCSSEEEEEECHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHhhheEEEEEeCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 446788888888888777777777665567777666666666665544
No 262
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=20.95 E-value=1.9e+02 Score=24.32 Aligned_cols=24 Identities=4% Similarity=-0.090 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEcc
Q 045468 43 NIHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 43 ni~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
..+++..|.++|++.|-.+++|..
T Consensus 220 ~~~~l~~i~~l~~~~~~~li~Dea 243 (448)
T 3meb_A 220 TEAQWKELLPIMKEKKHIAFFDSA 243 (448)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CHHHHHHHHHHHHHCCCEEEEecc
Confidence 478999999999999988888754
No 263
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=20.92 E-value=1.7e+02 Score=23.69 Aligned_cols=47 Identities=21% Similarity=0.117 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCe
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRK 60 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~ 60 (221)
..|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=.
T Consensus 60 ~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 60 VQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 34555544444444443333 577788888888888888888888763
No 264
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=20.90 E-value=2.2e+02 Score=21.78 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=26.2
Q ss_pred CccccCCCCCCC----CCCCHHHHHHHHHHHHHhcCCcEEEEeccccHH-HHHHHHHHHHHc
Q 045468 1 MMSDSTNVLSPG----RTTSESVVKDALMRHVSAAKGRVITTQFASNIH-RLGSVKAAADLT 57 (221)
Q Consensus 1 Li~EsT~~~~~~----~~~sE~~v~~~i~~~~~~~~g~viv~~~a~ni~-Rl~~i~~~a~~~ 57 (221)
||+|+|+..... .-.+-.++.+.++++ + .++++..=|+.... ++..+.+.+++.
T Consensus 205 li~e~t~~~~~~~~~~~H~t~~~a~~~~~~~--~-~~~lvl~H~~~~~~~~~~~~~~~~~~~ 263 (280)
T 2e7y_A 205 LIHECTFLDARDRRYKNHAAIDEVMESVKAA--G-VKKVILYHISTRYIRQLKSVIKKYREE 263 (280)
T ss_dssp EEEECCBC--------CCCBHHHHHHHHHHH--T-CCEEEEESCCGGGHHHHHHHHHHHHHH
T ss_pred EEEeCCcCChhhHHhcCCCCHHHHHHHHHHc--C-CCEEEEEeecCcCcchHHHHHHHHHHh
Confidence 577888765411 122333444433332 2 35666666666443 566666655543
No 265
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.86 E-value=1.8e+02 Score=23.43 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHHHHhcCC---cEEEEeccccHHHHHHHHHHHHHcCCeEE
Q 045468 14 TTSESVVKDALMRHVSAAKG---RVITTQFASNIHRLGSVKAAADLTGRKLV 62 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g---~viv~~~a~ni~Rl~~i~~~a~~~gR~~v 62 (221)
+.|.+|-.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=.-+
T Consensus 56 ~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadav 107 (301)
T 3m5v_A 56 TLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGI 107 (301)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred hCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 45666655555555444333 78888888899999999999999987333
No 266
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=20.70 E-value=1.9e+02 Score=23.57 Aligned_cols=64 Identities=9% Similarity=-0.004 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHhcCCCC
Q 045468 151 MKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVKPQHFLPIHGELLFLKEHELLGRSTGIRH 219 (221)
Q Consensus 151 ~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~Pk~iiPVHge~~~~~~~~~~~~~~g~~~ 219 (221)
..+...+.+.|+.+.. ....+|..+...+..-++..+|+.|| +++...+.....+.|++.|+..
T Consensus 155 ~~~~~~~~~~g~~v~~----~~~~~~~~d~~~~l~~i~~~~~~vi~-~~~~~~~~~~~~~qa~~~gl~~ 218 (395)
T 3h6g_A 155 QELIKAPSRYNLRLKI----RQLPADTKDAKPLLKEMKRGKEFHVI-FDCSHEMAAGILKQALAMGMMT 218 (395)
T ss_dssp HHHHTGGGTSSCEEEE----EECCSSGGGGHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHhhhcCCceEEE----EEeCCCchhHHHHHHHHhhcCCeEEE-EECCHHHHHHHHHHHHHccccC
Confidence 3455666677888762 11233433333344444444677654 5788889999999999999853
No 267
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=20.57 E-value=1.4e+02 Score=24.27 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHhc-C-CcEEEEe-----ccccHHHHHHHHHHHHHcCC
Q 045468 15 TSESVVKDALMRHVSAA-K-GRVITTQ-----FASNIHRLGSVKAAADLTGR 59 (221)
Q Consensus 15 ~sE~~v~~~i~~~~~~~-~-g~viv~~-----~a~ni~Rl~~i~~~a~~~gR 59 (221)
.+.+++.+.++++++.. + +..|++. ...+.+.+..++++++++|+
T Consensus 286 gt~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~en~~a~v~~v~~~~~ 337 (338)
T 2eja_A 286 ASEEVIEEKTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLVKSFPL 337 (338)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSSEEBCBSSCCCTTSCHHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCeEEeCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 47899999999998762 2 3455442 34689999999999999876
No 268
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=20.55 E-value=2.7e+02 Score=20.81 Aligned_cols=17 Identities=6% Similarity=0.331 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHcCCeEE
Q 045468 149 RVMKMLNRISEIGSTIV 165 (221)
Q Consensus 149 ~~~~~~~~l~~~g~~v~ 165 (221)
.+..+...|.+.|..++
T Consensus 61 ~~~~~~~~l~~~g~~v~ 77 (315)
T 4f0j_A 61 TWERTIDVLADAGYRVI 77 (315)
T ss_dssp GGHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCeEE
Confidence 34455566666666665
No 269
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=20.35 E-value=1.9e+02 Score=23.14 Aligned_cols=49 Identities=20% Similarity=0.122 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHHHHHhcCC--cEEEEeccccHHHHHHHHHHHHHcCCeEE
Q 045468 14 TTSESVVKDALMRHVSAAKG--RVITTQFASNIHRLGSVKAAADLTGRKLV 62 (221)
Q Consensus 14 ~~sE~~v~~~i~~~~~~~~g--~viv~~~a~ni~Rl~~i~~~a~~~gR~~v 62 (221)
+.|.+|=.+-++.+++..+| .|++.+.+.+.....++.+.|.+.|=.-+
T Consensus 49 ~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadav 99 (294)
T 2ehh_A 49 TLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGA 99 (294)
T ss_dssp GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEE
T ss_pred hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 35555544444444443333 68888888899999999999999987433
No 270
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=20.18 E-value=1.9e+02 Score=23.31 Aligned_cols=44 Identities=16% Similarity=0.136 Sum_probs=28.8
Q ss_pred HHHHHHHhc--CCcEEEEecccc-------HHHHHHHHHHHHHcCCeEEEEcc
Q 045468 23 ALMRHVSAA--KGRVITTQFASN-------IHRLGSVKAAADLTGRKLVFVGM 66 (221)
Q Consensus 23 ~i~~~~~~~--~g~viv~~~a~n-------i~Rl~~i~~~a~~~gR~~vi~~~ 66 (221)
.+.+.+.+. +..+++.+...| .++++.|.++|++.|-.+++|..
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~ 213 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFA 213 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 344444432 235565444433 57899999999999988888754
No 271
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=20.12 E-value=3.4e+02 Score=21.75 Aligned_cols=71 Identities=11% Similarity=-0.112 Sum_probs=42.9
Q ss_pred CEEEEEecCCCCcHHHHHHHHHHHHHcCCeEEecCCceeeee--c-CCCHHHHHHHHHHcCCCEEEEcCCCh--------
Q 045468 134 DVILYSAKVIPGNESRVMKMLNRISEIGSTIVMGRNEGLHTS--G-HGYRGELEEVLKLVKPQHFLPIHGEL-------- 202 (221)
Q Consensus 134 ~~vI~s~~~~pg~e~~~~~~~~~l~~~g~~v~~~~~~~~h~S--G-HA~~~dL~~~i~~i~Pk~iiPVHge~-------- 202 (221)
|.|+...+..+++ ...+...|++++ .+... | ..+.++|.+.+.. +++.++-.+-.+
T Consensus 121 d~vl~~~p~~~~~-------~~~~~~~g~~~~-----~v~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~ 187 (396)
T 3jtx_A 121 PAIVSPNPFYQIY-------EGATLLGGGEIH-----FANCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDL 187 (396)
T ss_dssp CEEEEEESCCHHH-------HHHHHHTTCEEE-----EEECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCH
T ss_pred CEEEEcCCCcHhH-------HHHHHHcCCEEE-----EeecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCH
Confidence 6777766533322 234556788876 23221 2 3467788777765 777666433322
Q ss_pred HHHHHHHHHHHhcCC
Q 045468 203 LFLKEHELLGRSTGI 217 (221)
Q Consensus 203 ~~~~~~~~~~~~~g~ 217 (221)
.++.+.++++++.|+
T Consensus 188 ~~l~~i~~~~~~~~~ 202 (396)
T 3jtx_A 188 DGWKEVFDLQDKYGF 202 (396)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 367778888888874
No 272
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=20.11 E-value=1.9e+02 Score=23.18 Aligned_cols=24 Identities=8% Similarity=0.023 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEccc
Q 045468 44 IHRLGSVKAAADLTGRKLVFVGMS 67 (221)
Q Consensus 44 i~Rl~~i~~~a~~~gR~~vi~~~~ 67 (221)
.+++..+.++|++.|-.+++|...
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~ 192 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIH 192 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCEEEEEccc
Confidence 568999999999999888887543
No 273
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=20.07 E-value=4.1e+02 Score=22.66 Aligned_cols=66 Identities=11% Similarity=0.109 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCeEEecCCceeeeecCCCHHHHHHHHHHcC---CC-EEEEcCCChHHHHHHHHHHHhcCCC
Q 045468 149 RVMKMLNRISEIGSTIVMGRNEGLHTSGHGYRGELEEVLKLVK---PQ-HFLPIHGELLFLKEHELLGRSTGIR 218 (221)
Q Consensus 149 ~~~~~~~~l~~~g~~v~~~~~~~~h~SGHA~~~dL~~~i~~i~---Pk-~iiPVHge~~~~~~~~~~~~~~g~~ 218 (221)
....+...+.+.|+.+.. ....+--....|...++..++ |. .+|.+.|...++....+.+++.|+.
T Consensus 213 ~~~~~~~~~~~~Gi~v~~----~~~i~~~~~~~d~~~~l~~i~~~~~~a~vii~~~~~~~~~~l~~~~~~~g~~ 282 (496)
T 3ks9_A 213 GMDAFKELAAQEGLSIAH----SDKIYSNAGEKSFDRLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVV 282 (496)
T ss_dssp HHHHHHHHHHHTTCEEEE----EEEECTTCCHHHHHHHHHHHHTTTTTTCEEEEECCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCceEEE----EEEECCCCCHHHHHHHHHHHHhccCceEEEEEecChHHHHHHHHHHHHhCCC
Confidence 345677888899998762 111222345677777776663 54 7788899988888999999998875
No 274
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=20.06 E-value=2.2e+02 Score=19.61 Aligned_cols=46 Identities=13% Similarity=0.188 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEecc-ccHHHHHHHHHHHHHcCCeEE
Q 045468 16 SESVVKDALMRHVSAAKGRVITTQFA-SNIHRLGSVKAAADLTGRKLV 62 (221)
Q Consensus 16 sE~~v~~~i~~~~~~~~g~viv~~~a-~ni~Rl~~i~~~a~~~gR~~v 62 (221)
++.++.+.+.+.+.+++..|.+..|. ++ .++...+..|.+.|-++-
T Consensus 11 p~~~~~~~~~~~i~~A~~~I~i~~~~~~~-~~i~~aL~~a~~rGV~Vr 57 (155)
T 1byr_A 11 PEGSARVLVLSAIDSAKTSIRMMAYSFTA-PDIMKALVAAKKRGVDVK 57 (155)
T ss_dssp TTTHHHHHHHHHHHHCSSEEEEEESSBCC-HHHHHHHHHHHHTTCEEE
T ss_pred CCCcHHHHHHHHHHHHhhEEEEEEEEeCC-HHHHHHHHHHHHCCCEEE
Confidence 34567888889898888877776643 33 455554554555675433
Done!