Your job contains 1 sequence.
>045469
MQSASKRRSSIDGPGILDSDVGVDSIHRFGSQSLKACKIEDDSLTDSGETTFALFASLLD
SALQGTEEPPVELILSPSTSHIEACQFVVNDHTAQLCLRIVQWLEGLASKSLDLESKVRG
SHVGTYLPNSGVWHHTQRYLKKGVADANTVHHLDFDAPTREHAHQLPDDKKQDESLLEDV
WTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVIDFSPSVEALIKNGRSRTLQAIELESG
IGHQWRLWKWASYCTSEKIFEQRGSKFEAAIYAAQCSNLKHVLPICTNWETACWAMAKSW
LGVQLDLELARSQPGRMEQVKSFGDEIEGSPGQMNGISQPSVGPESWPVQVLNQQPRDLS
ALLQKLHSGEMVHEVVTQVCKEQQRQIEMKLMLGNIPHVLQLIWSWIAPSEDDQNVFRPH
GDPQMIRFGAHLVLVLRYLLTDELKDPFRKDLMDAGDLIIHMYAMFLFSEHHEELVGVYA
SQLARHRCIDLFVHMMELRLNSSVHVKYKIFLSAMEYLPFSSGDDLKGSFEEIIERVLSR
SREIKLGKYDKSTDVAEQHRLQSLQKAMVIQWLCFTPPSTIADVKDVSAKLLLRALIHSN
ILFREFALISMWRVPAMPIGAHELLSFLAEPLKQLSENPDTLEDNVSENLKEFQDWSEYY
SCDATYRKWLKIELENANVPALELSLEEKQRAIAAAQETLNMSLILLQRKENPWLVSLED
PIYESVEALYLELHATAILCLPSGECLSPDATMCTALMSALYSTLSEEVVLNRELMVNVS
ISSSNNYCIEVVLRCLAVEGDGLGIHDMSDGGVLGTVMAAGFKGELTRFQAGVTMEICRL
DAWYSSKEGSLEGPATFIVRGLCRRCCLPELILRCMQVSISLVELGNQIENHDELIELVA
CSESGFLHLFSQQQLQEFLLFEREYAICKMEPEEESSC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045469
(938 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087477 - symbol:AT3G14120 species:3702 "Arabi... 3026 0. 3
ZFIN|ZDB-GENE-041210-245 - symbol:nup107 "nucleoporin 107... 264 7.2e-19 1
UNIPROTKB|F1NH49 - symbol:F1NH49 "Uncharacterized protein... 222 3.0e-18 2
UNIPROTKB|F1P0A8 - symbol:F1P0A8 "Uncharacterized protein... 222 3.1e-18 2
DICTYBASE|DDB_G0285579 - symbol:nup107 "nucleoporin 107" ... 131 2.0e-17 4
UNIPROTKB|F1SH64 - symbol:F1SH64 "Uncharacterized protein... 245 8.2e-17 1
UNIPROTKB|Q6PJE1 - symbol:NUP107 "NUP107 protein" species... 232 2.1e-16 2
RGD|621160 - symbol:Nup107 "nucleoporin 107" species:1011... 237 6.0e-16 1
UNIPROTKB|F6V153 - symbol:NUP107 "Uncharacterized protein... 235 9.9e-16 1
UNIPROTKB|B4DZ67 - symbol:NUP107 "Nuclear pore complex pr... 232 2.0e-15 1
UNIPROTKB|P57740 - symbol:NUP107 "Nuclear pore complex pr... 232 2.1e-15 1
MGI|MGI:2143854 - symbol:Nup107 "nucleoporin 107" species... 231 2.7e-15 1
UNIPROTKB|E1BDU0 - symbol:NUP107 "Uncharacterized protein... 222 2.5e-14 1
POMBASE|SPBC428.01c - symbol:nup107 "nucleoporin Nup107" ... 166 6.2e-08 2
FB|FBgn0027868 - symbol:Nup107 "Nucleoporin 107kD" specie... 139 2.2e-07 2
>TAIR|locus:2087477 [details] [associations]
symbol:AT3G14120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR007252 Pfam:PF04121 GO:GO:0005635
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810 GO:GO:0005643
UniGene:At.39288 KO:K14301 PANTHER:PTHR13003 EMBL:AY139761
IPI:IPI00524898 RefSeq:NP_188028.2 ProteinModelPortal:Q8L748
STRING:Q8L748 PRIDE:Q8L748 EnsemblPlants:AT3G14120.1 GeneID:820629
KEGG:ath:AT3G14120 TAIR:At3g14120 HOGENOM:HOG000030395
InParanoid:Q8L748 OMA:ESACWAM PhylomeDB:Q8L748
ProtClustDB:CLSN2690924 Genevestigator:Q8L748 Uniprot:Q8L748
Length = 1101
Score = 3026 (1070.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 572/762 (75%), Positives = 654/762 (85%)
Query: 64 QGTEEPPVELILSPSTSHIEACQFVVNDHTAQLCLRIVQWLEGLASKSLDLESKVRGSHV 123
+GT+E P LIL PSTSH+EACQFV+NDHTAQLCLRIV WLE LASKSLDLE KV+GSHV
Sbjct: 207 KGTDEVPENLILIPSTSHLEACQFVLNDHTAQLCLRIVMWLEELASKSLDLERKVQGSHV 266
Query: 124 GTYLPNSGVWHHTQRYLKKGVADANTVHHLDFDAPTREHAHQLPDDKKQDESLLEDVWTL 183
GTYLPN+GVWHHTQRYLKK ++A+T+HHLDFDAPTREHA LPDD KQDES+LEDVWTL
Sbjct: 267 GTYLPNAGVWHHTQRYLKKNGSNADTLHHLDFDAPTREHARLLPDDYKQDESVLEDVWTL 326
Query: 184 LRAGRQEEACDLCRSAGQPWRAATLCPFGVIDFSPSVEALIKNGRSRTLQAIELESGIGH 243
+RAGR EEACDLCRSAGQ WRAATLCPF +D PS+EAL+KNG +RTLQAIE ESG G+
Sbjct: 327 IRAGRIEEACDLCRSAGQSWRAATLCPFSGMDMFPSIEALVKNGENRTLQAIEQESGFGN 386
Query: 244 QWRLWKWASYCTSEKIFEQRGSKFEAAIYAAQCSNLKHVLPICTNWETACWAMAKSWLGV 303
Q RLWKWASYC SEKI EQ G K E A++A QCSNL +LPICT+WE+ACWAMAKSWL V
Sbjct: 387 QLRLWKWASYCASEKIAEQDGGKHEVAVFATQCSNLNRMLPICTDWESACWAMAKSWLDV 446
Query: 304 QLDLELARSQPGRMEQVKSFGDEIEGSP-GQMNGISQPSVGPESWPVQVLNQQPRDLSAL 362
Q+DLELA+S+PG E+ KS DE SP NG Q S GPE WP+ VLNQQPRDL AL
Sbjct: 447 QVDLELAQSKPGLTERFKSCIDE---SPEATQNGC-QASFGPEDWPLHVLNQQPRDLPAL 502
Query: 363 LQKLHSGEMVHEVVTQVCKEQQRQIEMKLMLGNIPHVLQLIWSWIAPSEDDQNVFRPHGD 422
LQKLHSGEMVHE V + CKEQ RQI+M LMLG+I H+L +IWSWIAP EDDQ+ FRPHGD
Sbjct: 503 LQKLHSGEMVHEAVVRGCKEQHRQIQMNLMLGDISHLLDIIWSWIAPLEDDQSNFRPHGD 562
Query: 423 PQMIRFGAHLVLVLRYLLTDELKDPFRKDLMDAGDLIIHMYAMFLFSEHHEELVGVYASQ 482
P MI+FGAH+VLVLR L TDE+ D F++ L + GDLI+HMYAMFLFS+ HEELVG+YASQ
Sbjct: 563 PHMIKFGAHMVLVLRLLFTDEINDSFKEKLNNVGDLILHMYAMFLFSKQHEELVGIYASQ 622
Query: 483 LARHRCIDLFVHMMELRLNSSVHVKYKIFLSAMEYLPFSSGDDLKGSFEEIIERVLSRSR 542
LARHRCI+LFVHMMELR++SSVHVKYKIFLSAMEYL FS DDL G+FEEI++RVLSRSR
Sbjct: 623 LARHRCIELFVHMMELRMHSSVHVKYKIFLSAMEYLSFSPVDDLHGNFEEIVDRVLSRSR 682
Query: 543 EIKLGKYDKSTDVAEQHRLQSLQKAMVIQWLCFTPPSTIADVKDVSAKLLLRALIHSNIL 602
EIKL KYD S DVAEQHR QSLQKA+ IQWLCFTPPSTI DVKDV++KLLLR+L+HSNIL
Sbjct: 683 EIKLAKYDPSIDVAEQHRQQSLQKAIAIQWLCFTPPSTIKDVKDVTSKLLLRSLMHSNIL 742
Query: 603 FREFALISMWRVPAMPIGAHELLSFLAEPLKQLSENPDTLEDNVSENLKEFQDWSEYYSC 662
FREFALI+MWRVPA P+GAH LLS+LAEPLKQLSENPDTLED VSENL+EFQDW+EYYSC
Sbjct: 743 FREFALIAMWRVPATPVGAHTLLSYLAEPLKQLSENPDTLEDYVSENLQEFQDWNEYYSC 802
Query: 663 DATYRKWLKIELENANVPALELSLEEKQRAIAAAQETLNMSLILLQRKENPWLVSLEDPI 722
DA YR WLK +LENA V ELS EE Q+A+ AA+ETL+ SL LL R++NPW+ LED +
Sbjct: 803 DAKYRNWLKFQLENAEVT--ELSEEENQKAVVAAKETLDSSLSLLLRQDNPWMTFLEDHV 860
Query: 723 YESVEALYLELHATAILCLPSGECLSPDATMCTALMSALYSTLSEEVVLNRELMVNVSIS 782
+ES E L+LELHATA+LCLPSGECL PDAT+C ALMSALYS++SEEVVL+R+LMVNVSIS
Sbjct: 861 FESEEYLFLELHATAMLCLPSGECLRPDATVCAALMSALYSSVSEEVVLDRQLMVNVSIS 920
Query: 783 SSNNYCIEVVLRCLAVEGDGLGIHDMSDGGVLGTVMAAGFKG 824
S ++YCIEVVLRCLA++GDGLG H+ +DGG+L V AAGFKG
Sbjct: 921 SRDSYCIEVVLRCLAIKGDGLGPHNANDGGILSAVAAAGFKG 962
Score = 369 (135.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 74/113 (65%), Positives = 85/113 (75%)
Query: 825 ELTRFQAGVTMEICRLDAWYSSKEGSLEGPATFIVRGLCRRCCLPELILRCMQVSISLVE 884
ELTRFQAGVTM+I RLDAWYSSKEGSLE PAT+IVRGLCRRCCLPEL+LR MQVS+SL+E
Sbjct: 987 ELTRFQAGVTMDISRLDAWYSSKEGSLETPATYIVRGLCRRCCLPELVLRSMQVSVSLME 1046
Query: 885 LGNQIENHDELIELVACSESGXXXXXXXXXXXXXXXXEREYAICKMEPEEESS 937
GN E+HDELIELVA E+G EREY + ++E +EE S
Sbjct: 1047 SGNPPEDHDELIELVASDETGFLSLFSRQQLQEFMLFEREYRMSQLELQEELS 1099
Score = 104 (41.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 33/81 (40%), Positives = 41/81 (50%)
Query: 3 SASKRRSSIDGPGILDSDVGVDSIHRFGSQSLKACKIEDDSLTDSGETTXXXXXXXXXXX 62
SAS RR S+ GIL+ D R SQSLKACKIE+D L +SG+TT
Sbjct: 89 SAS-RRESV---GILNDDDEA-LFRRVESQSLKACKIENDELAESGDTTFALFASLFDSA 143
Query: 63 XQGTEE-PPVELILSPSTSHI 82
QG P + L L S ++
Sbjct: 144 LQGLMSIPNLMLRLEESCRNV 164
>ZFIN|ZDB-GENE-041210-245 [details] [associations]
symbol:nup107 "nucleoporin 107" species:7955 "Danio
rerio" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0051292 "nuclear pore complex
assembly" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=IMP] InterPro:IPR007252 Pfam:PF04121
ZFIN:ZDB-GENE-041210-245 GO:GO:0005643 GO:GO:0006406 GO:GO:0051292
CTD:57122 HOVERGEN:HBG052677 KO:K14301 PANTHER:PTHR13003
GeneTree:ENSGT00390000012080 EMBL:BX897665 IPI:IPI00504998
RefSeq:NP_001025338.1 UniGene:Dr.48434 Ensembl:ENSDART00000040033
GeneID:562350 KEGG:dre:562350 InParanoid:Q5RGI2 NextBio:20884365
Uniprot:Q5RGI2
Length = 919
Score = 264 (98.0 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 81/255 (31%), Positives = 120/255 (47%)
Query: 67 EEPPVELILSPSTSHIEAC-QFVVNDHTAQLCLRIVQWLEGLASKSL-DLESKVRGSHVG 124
EE + I PS S QF D + +V WLE +A + D +
Sbjct: 229 EEDIMMDITMPSESEKAVMEQFFQKDSMVRQSQLVVDWLESIAKDDIGDFSDNIEYYAKS 288
Query: 125 TYLPNSGVWHHTQRYLKKGVADANTVHHLDFDAPTREHAHQLPD-DKKQDESLLEDVWTL 183
Y N+ +R G V LD DAP R+ L D D++ D LL++++ L
Sbjct: 289 VYWENTLHTLKLRRNQSSGGLSRPLVTELDPDAPIRQK-RPLADLDREDDSRLLKNLFNL 347
Query: 184 LRAGRQEEACDLCRSAGQPWRAATLCPFGVIDFSPSVEALIKNGRSRTLQAIELESGIGH 243
+RAG +EA LC+ GQ WRAATL + + P++ NG LQ +E G H
Sbjct: 348 IRAGMTDEAQRLCKRCGQAWRAATLEGWKLYH-DPNI-----NGGGGELQPVE---GNPH 398
Query: 244 QWRLWKWASYCTSEKIFEQRGSKFEAAIYAAQCSNLKHVLPICTNWETACWAMAKSWLGV 303
+ +WK + +E E++ +K+E AIYAA NLK +LP+C +WE WA + +
Sbjct: 399 R-SVWKVCCWRMAE---EEQFNKYERAIYAALSGNLKQLLPVCESWEDTVWAYFRVMVDT 454
Query: 304 QLDLELARSQPGRME 318
++ E+ S G E
Sbjct: 455 LVEQEICSSGLGSEE 469
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 96/484 (19%), Positives = 193/484 (39%)
Query: 289 WETACWAMAKSWLGVQLDLELARSQPGRMEQV----KSFGDEIEGSPGQM-NGISQPSVG 343
W+ CW MA+ + + + + G ++Q+ +S+ D + M + + + +
Sbjct: 402 WKVCCWRMAEEEQFNKYERAIYAALSGNLKQLLPVCESWEDTVWAYFRVMVDTLVEQEIC 461
Query: 344 PESWPVQVLNQQPRDL---SALLQKLHSGEMVHEV--VTQVCKEQQRQIEMKLMLGNIPH 398
+ L + PRD + L+K+ E V KE I+ ++LG++
Sbjct: 462 SSGLGSEELEELPRDFLETNWTLEKVFEEIQATESKRVLDATKEHYHVIQKFVILGDLDG 521
Query: 399 VLQLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLTDELKDPFRKDLMDAGDL 458
+L+ W+ +N P ++RF +HLVL R L +LK+ D++ A
Sbjct: 522 LLEEFSDWLG-----RNTPLP---AHLLRFMSHLVLFYRSLGM-QLKEEVCVDVLKA--- 569
Query: 459 IIHMYAMFLFSEHHEELVGVYASQLARHRCIDLFVHMMELRLNSSVHVKYKIFLSAMEYL 518
Y L E EL+ Y S L + + +E + + K+ + L+
Sbjct: 570 ----YISLLVKEKQVELIAFYVSHLPADLAVSQYAQFLE-EVTETEQRKHCLELATQ--- 621
Query: 519 PFSSGDDLKGSFEEIIERVLSRSREIKLGKYDKSTDVAEQHRLQSLQKAMVIQWLCFTPP 578
+G ++ + ++E + R + + +D + + ++ QK VI WL F P
Sbjct: 622 ---AGLEVAAITKTVVETIRERDTD-EFSHHDLTPALDTATTVEDQQKIDVIDWLVFDPA 677
Query: 579 STIADVKDVSAKLLLRALIHSNILFREFALISMWRVPAMPIGAHELLSFLAE-----PLK 633
+K +A ++R + S + A + +VP + E+ E PL
Sbjct: 678 QRAEALKQSNA--IMRKFLASKK--HDAAKMVFAKVPEDSM--REIYRQWEEQGMDTPLP 731
Query: 634 QLSENPDTLEDNVS-----ENLKEFQDWSEYYSC---------DATYRKWLKIELENANV 679
EN + +++ E + F +W ++ +C A + + + E++ A
Sbjct: 732 AEEEN--AIREHLCIRAYLEAHEAFNEWFKHMNCPPVKPTAPAQAKFTEKVAHEMKEAEY 789
Query: 680 PALELSLEEKQRAIAAAQETLNMSLI-LLQRKENPWLVSLEDPIYESVEALYLELHATAI 738
++ LE Q + A E + + +L + W+V + + E E + ++
Sbjct: 790 ---KIELENWQGRLGALTEDVKERIYNVLLFVDGGWMVDVREDAEEDSERSH-QMTLLRR 845
Query: 739 LCLP 742
LCLP
Sbjct: 846 LCLP 849
>UNIPROTKB|F1NH49 [details] [associations]
symbol:F1NH49 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005487 "nucleocytoplasmic transporter
activity" evidence=ISS] [GO:0005643 "nuclear pore" evidence=ISS]
[GO:0006406 "mRNA export from nucleus" evidence=ISS]
InterPro:IPR007252 Pfam:PF04121 GO:GO:0005643 GO:GO:0006406
GO:GO:0005487 PANTHER:PTHR13003 GeneTree:ENSGT00390000012080
EMBL:AADN02009872 EMBL:AADN02009873 IPI:IPI00581412
Ensembl:ENSGALT00000016152 ArrayExpress:F1NH49 Uniprot:F1NH49
Length = 920
Score = 222 (83.2 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 72/234 (30%), Positives = 117/234 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHTQRYLKKGVADANT-VHHLDFDA 157
+V WLE +A + + + Y N+ + QR L + + V LD DA
Sbjct: 263 VVDWLESIAKDEIGNFSDNIEFYAKSVYWENT-LHILKQRQLSTYIGSSRPLVTELDPDA 321
Query: 158 PTREHAHQLPD-DKKQDESLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVIDF 216
P R+ L D D++ D LL+ ++TL+RAG +EA LC+ GQ WRAATL + +
Sbjct: 322 PIRQKL-PLDDLDREDDARLLKYLFTLIRAGMTDEAQRLCKRCGQAWRAATLEGWKLYH- 379
Query: 217 SPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYAAQ 275
P++ NG + +Q +E G+ +R +WK + +E E++ +++E AIYAA
Sbjct: 380 DPNI-----NGGNE-VQPVE-----GNPYRCIWKICCWRMAE---EEQFNRYERAIYAAL 425
Query: 276 CSNLKH---VLPICTNWETACWAMAKSWLGVQLDLELARSQPGRMEQVKSFGDE 326
NLK +LP+C WE WA + + ++ E+ R+ E+V+ E
Sbjct: 426 SGNLKQNTQLLPVCDTWEDTVWAYFRVMVDTLVEQEI-RTSVVTTEEVEELPRE 478
Score = 89 (36.4 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 47/220 (21%), Positives = 90/220 (40%)
Query: 381 KEQQRQIEMKLMLGNIPHVLQLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLL 440
+E R I+ ++LG++ +++ W++ D++V H ++RF HL+L R L
Sbjct: 506 QEHYRVIQKFIILGDVDGLMEEFSRWLSK---DRSVLPGH----LLRFMTHLILFFRTLG 558
Query: 441 TDELKDPFRKDLMDAGDLIIHMYAMFLFSEHHEELVGVYASQLARHRCIDLFVHMMELRL 500
+ K+ + ++ Y + SE H +L+ Y S L + + +E
Sbjct: 559 L-QTKEEVSVE-------VLKTYIQRMISEKHTDLIAFYVSHLPPELAVVQYALFLEDVT 610
Query: 501 NSSVHVKYKIFLSAMEYLPFSSGDDLKGSFEEIIERVLSRSR-EIKLGKYDKSTDVAEQH 559
S ++ A E +G D+ + ++E + + + + T E
Sbjct: 611 ESDQ--RHHCLELAKE-----AGLDVAAITKTVVENIRKKDAGDFSHHDHMLDTGTTEAD 663
Query: 560 RLQSLQKAMVIQWLCFTPPSTIADVKDVSAKLLLRALIHS 599
RL K VI WL F P +K +A ++R + S
Sbjct: 664 RL----KIDVIDWLVFDPAQRAEALKQSNA--IMRKFLAS 697
>UNIPROTKB|F1P0A8 [details] [associations]
symbol:F1P0A8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] InterPro:IPR007252
Pfam:PF04121 GO:GO:0000776 GO:GO:0005643 GO:GO:0006406
GO:GO:0005487 OMA:NEKHTNL PANTHER:PTHR13003
GeneTree:ENSGT00390000012080 EMBL:AADN02009872 EMBL:AADN02009873
IPI:IPI00821889 Ensembl:ENSGALT00000038607 ArrayExpress:F1P0A8
Uniprot:F1P0A8
Length = 924
Score = 222 (83.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 72/234 (30%), Positives = 117/234 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHTQRYLKKGVADANT-VHHLDFDA 157
+V WLE +A + + + Y N+ + QR L + + V LD DA
Sbjct: 267 VVDWLESIAKDEIGNFSDNIEFYAKSVYWENT-LHILKQRQLSTYIGSSRPLVTELDPDA 325
Query: 158 PTREHAHQLPD-DKKQDESLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVIDF 216
P R+ L D D++ D LL+ ++TL+RAG +EA LC+ GQ WRAATL + +
Sbjct: 326 PIRQKL-PLDDLDREDDARLLKYLFTLIRAGMTDEAQRLCKRCGQAWRAATLEGWKLYH- 383
Query: 217 SPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYAAQ 275
P++ NG + +Q +E G+ +R +WK + +E E++ +++E AIYAA
Sbjct: 384 DPNI-----NGGNE-VQPVE-----GNPYRCIWKICCWRMAE---EEQFNRYERAIYAAL 429
Query: 276 CSNLKH---VLPICTNWETACWAMAKSWLGVQLDLELARSQPGRMEQVKSFGDE 326
NLK +LP+C WE WA + + ++ E+ R+ E+V+ E
Sbjct: 430 SGNLKQNTQLLPVCDTWEDTVWAYFRVMVDTLVEQEI-RTSVVTTEEVEELPRE 482
Score = 89 (36.4 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 47/220 (21%), Positives = 90/220 (40%)
Query: 381 KEQQRQIEMKLMLGNIPHVLQLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLVLRYLL 440
+E R I+ ++LG++ +++ W++ D++V H ++RF HL+L R L
Sbjct: 510 QEHYRVIQKFIILGDVDGLMEEFSRWLSK---DRSVLPGH----LLRFMTHLILFFRTLG 562
Query: 441 TDELKDPFRKDLMDAGDLIIHMYAMFLFSEHHEELVGVYASQLARHRCIDLFVHMMELRL 500
+ K+ + ++ Y + SE H +L+ Y S L + + +E
Sbjct: 563 L-QTKEEVSVE-------VLKTYIQRMISEKHTDLIAFYVSHLPPELAVVQYALFLEDVT 614
Query: 501 NSSVHVKYKIFLSAMEYLPFSSGDDLKGSFEEIIERVLSRSR-EIKLGKYDKSTDVAEQH 559
S ++ A E +G D+ + ++E + + + + T E
Sbjct: 615 ESDQ--RHHCLELAKE-----AGLDVAAITKTVVENIRKKDAGDFSHHDHMLDTGTTEAD 667
Query: 560 RLQSLQKAMVIQWLCFTPPSTIADVKDVSAKLLLRALIHS 599
RL K VI WL F P +K +A ++R + S
Sbjct: 668 RL----KIDVIDWLVFDPAQRAEALKQSNA--IMRKFLAS 701
>DICTYBASE|DDB_G0285579 [details] [associations]
symbol:nup107 "nucleoporin 107" species:44689
"Dictyostelium discoideum" [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA;ISS] [GO:0006406 "mRNA
export from nucleus" evidence=ISS] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR007252 Pfam:PF04121
dictyBase:DDB_G0285579 GenomeReviews:CM000153_GR EMBL:AAFI02000079
GO:GO:0005643 GO:GO:0006406 GO:GO:0005487 eggNOG:NOG258212
KO:K14301 PANTHER:PTHR13003 RefSeq:XP_638137.1 PRIDE:Q54N06
EnsemblProtists:DDB0235236 GeneID:8625185 KEGG:ddi:DDB_G0285579
InParanoid:Q54N06 OMA:QYERAIY ProtClustDB:CLSZ2728920
Uniprot:Q54N06
Length = 985
Score = 131 (51.2 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 80 SHIEACQFVVN-DHTAQLCLRIVQWLEGLASKSLDLESKVRGSHVGTYLPNSGV-WHHTQ 137
+ ++ +++ DH + L +++WLE ++S+ ++L N V W +T
Sbjct: 253 NQVQVYNYLIKKDHKLRENLILLEWLEEMSSQ-VELND------------NDAVFWEYTL 299
Query: 138 RYLKKG-----VADANTVHHLDFDAPTREHAHQLPDDKKQDESLLEDVWTLLRAGRQEEA 192
LKK + + V LD DA +R++ DD+K L+ VW+ LRAG + A
Sbjct: 300 IKLKKSNSITMLTNNQMVSELDPDAMSRQNKPIDKDDEKNQSRFLKTVWSFLRAGDRVGA 359
Query: 193 CDLCRSAGQPWRAATL 208
+ C + GQ WRA TL
Sbjct: 360 AEYCTNVGQFWRAQTL 375
Score = 109 (43.4 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 590 KLLLRALIHSNILFREFALISMWRVPAMPIGAHELLSFLAEPLKQLSENPDTLEDNVSEN 649
+LL++A++ SN+L R+F IS+ + A A ELL L + + +++ L ++ + N
Sbjct: 725 QLLIKAILQSNLLLRDF--ISLNKYGA----ASELLKSLPKDIVMIAKQQSPLNESDTNN 778
Query: 650 L-KEFQDWSEYYSCDATYRKWLK 671
+ KEF+DW Y + + WL+
Sbjct: 779 IIKEFRDWENYITANIRINLWLQ 801
Score = 94 (38.1 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 37/119 (31%), Positives = 55/119 (46%)
Query: 228 RSRTLQAIELESG---IGHQW-RLWKWASYCTSEKIFEQRGSKFEAAIYAAQCSNLKHVL 283
R++TL + G IG+ + LWK S C + I + ++E AIY C NL+ L
Sbjct: 371 RAQTLIGLNYYQGEHSIGNPYFNLWK--SNCLN--ISKNSNDQYERAIYGLLCGNLEATL 426
Query: 284 PICTNWETACWAMAKSWLGVQLDLELARS-QPGRMEQVKSFGDEIEGSPGQ-MNGISQP 340
PI NW W +L V D L R +P R S ++I+ P ++ I+ P
Sbjct: 427 PIQKNWYDYFWC----YLRVLYDESLYRELKPYRSPL--SIEEDIDSPPSTCISQINTP 479
Score = 65 (27.9 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 29/111 (26%), Positives = 48/111 (43%)
Query: 376 VTQVCKEQQRQIEMKLMLGNIPHVLQ-LIWS--WIAPSEDDQNVFRPHGDPQMIRFGAHL 432
+ ++ K QIE+K N H +Q LI + + N+ + P+ RF L
Sbjct: 482 ILEILKNNTSQIEIKNQSENPYHQIQELIIADDYSILFNSLPNLLLKNKTPEFNRFAVLL 541
Query: 433 VLVLRYLLTDELKDPFRKDLMDAGDLIIHMYAMFLFSEHHEELVGVYASQL 483
+L R EL +D + +++I+ Y L + ELV +Y S L
Sbjct: 542 ILFFRKREQYELIST-SEDCPE--NIVINEYVQHLINSQQYELVALYTSLL 589
Score = 64 (27.6 bits), Expect = 6.6e-13, Sum P(4) = 6.6e-13
Identities = 22/94 (23%), Positives = 50/94 (53%)
Query: 564 LQKAMVIQWLCFTPPSTIADVKDVSAKLLLRALIHSNILFREFALISMWRVPAMPIGA-H 622
L K IQWLCF +LL++A++ SN+L R+F ++ + + + +
Sbjct: 711 LVKINSIQWLCF------------EKQLLIKAILQSNLLLRDFISLNKYGAASELLKSLP 758
Query: 623 ELLSFLAEPLKQLSENPDTLEDNVSENLKEFQDW 656
+ + +A+ L+E+ DT +N+ + ++++++
Sbjct: 759 KDIVMIAKQQSPLNES-DT--NNIIKEFRDWENY 789
>UNIPROTKB|F1SH64 [details] [associations]
symbol:F1SH64 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006810 "transport" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA] InterPro:IPR007252 Pfam:PF04121 GO:GO:0006810
GO:GO:0005643 OMA:NEKHTNL PANTHER:PTHR13003
GeneTree:ENSGT00390000012080 EMBL:CU695219
Ensembl:ENSSSCT00000000524 Uniprot:F1SH64
Length = 922
Score = 245 (91.3 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 76/228 (33%), Positives = 113/228 (49%)
Query: 91 DHTAQLCLRIVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHT--QRYLKKGVADA 147
D + C +V WLE +A + D + Y N+ HT QR L +
Sbjct: 258 DSLVRQCQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT---LHTLKQRQLPSYIGSV 314
Query: 148 NT-VHHLDFDAPTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRA 205
V LD DAP R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRA
Sbjct: 315 RPLVTELDPDAPIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRA 373
Query: 206 ATLCPFGVIDFSPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRG 264
ATL + + P+V NG + ELE G+ +R +WK + + +E ++
Sbjct: 374 ATLEGWKLYH-DPNV-----NGGT------ELEPVEGNPYRCIWKISCWRMAE---DEHF 418
Query: 265 SKFEAAIYAAQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
+++E AIYAA NLK +LP+C WE WA + + ++ E+ S
Sbjct: 419 NRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTS 466
>UNIPROTKB|Q6PJE1 [details] [associations]
symbol:NUP107 "NUP107 protein" species:9606 "Homo sapiens"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR007252 Pfam:PF04121 GO:GO:0006810
GO:GO:0005643 UniGene:Hs.524574 HGNC:HGNC:29914
HOGENOM:HOG000006750 HOVERGEN:HBG052677 PANTHER:PTHR13003
EMBL:AC090061 EMBL:AC124890 EMBL:BC017167 IPI:IPI00448974
SMR:Q6PJE1 STRING:Q6PJE1 Ensembl:ENST00000378905 UCSC:uc001sug.3
Uniprot:Q6PJE1
Length = 686
Score = 232 (86.7 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 74/219 (33%), Positives = 110/219 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHT--QRYLKKGVADANT-VHHLDF 155
+V WLE +A + + + Y N+ HT QR L V V LD
Sbjct: 118 VVDWLESIAKDEIGEFSDNIEFYAKSVYWENT---LHTLKQRQLTSYVGSVRPLVTELDP 174
Query: 156 DAPTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVI 214
DAP R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 175 DAPIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLY 233
Query: 215 DFSPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYA 273
P+V NG + ELE G+ +R +WK + + +E ++ +++E AIYA
Sbjct: 234 H-DPNV-----NGGT------ELEPVEGNPYRRIWKISCWRMAE---DELFNRYERAIYA 278
Query: 274 AQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
A NLK +LP+C WE WA + + ++ E+ S
Sbjct: 279 ALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTS 317
Score = 57 (25.1 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 38/162 (23%), Positives = 65/162 (40%)
Query: 522 SGDDLKGSFEEIIERVLSRSREIKLG-KYDKSTDVAEQHRLQSLQKAMVIQWLCFTPPST 580
S ++L G + ++ R + L K + S +V + + + K VI WL F P
Sbjct: 387 SRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQEDRLKIDVIDWLVFDPAQR 446
Query: 581 IADVKDVSAKLLLRALIHSNILFREFALISMWRVPAMPIGAHELLSFLAEPLKQLSENPD 640
+K +A ++R + S E A ++P I E+ + E Q E+P
Sbjct: 447 AEALKQGNA--IMRKFLASKK--HEAAKEVFVKIPQDSIA--EIYNQCEE---QGMESPL 497
Query: 641 TLEDNVSENLKEFQDWSEYYSCDATYRKWLKIELENANVPAL 682
ED+ + ++E Y T+ +W K PAL
Sbjct: 498 PAEDDNA--IREHLCIRAYLEAHETFNEWFKHMNSVPQKPAL 537
>RGD|621160 [details] [associations]
symbol:Nup107 "nucleoporin 107" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO;ISS] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IEA;ISO;ISS]
[GO:0005643 "nuclear pore" evidence=IEA;ISO;ISS] [GO:0006406 "mRNA
export from nucleus" evidence=IEA;ISO;ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0017056 "structural constituent of
nuclear pore" evidence=ISO;ISS] [GO:0031080 "nuclear pore outer
ring" evidence=ISO;ISS] [GO:0031965 "nuclear membrane"
evidence=ISO;ISS] [GO:0034399 "nuclear periphery" evidence=ISO;ISS]
[GO:0051292 "nuclear pore complex assembly" evidence=ISO;ISS]
InterPro:IPR007252 Pfam:PF04121 RGD:621160 GO:GO:0015031
GO:GO:0006406 GO:GO:0000777 GO:GO:0031080 GO:GO:0005487
eggNOG:NOG258212 HOGENOM:HOG000006750 HOVERGEN:HBG052677
OrthoDB:EOG4JHCF2 PANTHER:PTHR13003 EMBL:L31840 IPI:IPI00207272
PIR:A54142 UniGene:Rn.11398 ProteinModelPortal:P52590 SMR:P52590
STRING:P52590 PRIDE:P52590 InParanoid:P52590 ArrayExpress:P52590
Genevestigator:P52590 GermOnline:ENSRNOG00000006541 Uniprot:P52590
Length = 926
Score = 237 (88.5 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 73/217 (33%), Positives = 109/217 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHTQRYLKKGVADANT-VHHLDFDA 157
+V WLE +A + D + Y N+ + QR L + V LD DA
Sbjct: 270 VVDWLESIAKDEIGDFSDNIEFYAKSVYWENT-LHSLKQRQLLSYIGSTRPLVTELDPDA 328
Query: 158 PTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVIDF 216
P R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 329 PIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWK-LHH 386
Query: 217 SPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYAAQ 275
P+V NG + ELE G+ +R +WK + + +E ++ +K+E AIYAA
Sbjct: 387 DPNV-----NGGT------ELEPVEGNPYRRIWKISCWRMAE---DELFNKYERAIYAAL 432
Query: 276 CSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
NLK +LP+C WE WA + + ++ E+ S
Sbjct: 433 SGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTS 469
>UNIPROTKB|F6V153 [details] [associations]
symbol:NUP107 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] InterPro:IPR007252 Pfam:PF04121
GO:GO:0006810 GO:GO:0005643 CTD:57122 KO:K14301 OMA:NEKHTNL
PANTHER:PTHR13003 GeneTree:ENSGT00390000012080
Ensembl:ENSCAFT00000000659 EMBL:AAEX03007040 RefSeq:XP_531670.3
GeneID:474440 KEGG:cfa:474440 Uniprot:F6V153
Length = 925
Score = 235 (87.8 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 74/219 (33%), Positives = 110/219 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHT--QRYLKKGVADANT-VHHLDF 155
+V WLE +A + D + Y N+ HT QR L + V LD
Sbjct: 269 VVDWLESIAKDEIGDFSDNIEFYAKSVYWENT---LHTLKQRQLPSYIGSVRPLVTELDP 325
Query: 156 DAPTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVI 214
DAP R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 326 DAPIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLY 384
Query: 215 DFSPSVEALIKNGRSRTLQAIELESGIGHQWRL-WKWASYCTSEKIFEQRGSKFEAAIYA 273
P+V NG + ELE G+ +R+ WK + + +E ++ +++E AIYA
Sbjct: 385 H-DPNV-----NGGT------ELEPVEGNPYRIIWKISCWRMAE---DELFNRYERAIYA 429
Query: 274 AQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
A NLK +LP+C WE WA + + ++ E+ S
Sbjct: 430 ALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTS 468
>UNIPROTKB|B4DZ67 [details] [associations]
symbol:NUP107 "Nuclear pore complex protein Nup107"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR007252 Pfam:PF04121 GO:GO:0006810 GO:GO:0005643
UniGene:Hs.524574 HGNC:HGNC:29914 HOVERGEN:HBG052677
PANTHER:PTHR13003 EMBL:AC090061 EMBL:AC124890 EMBL:AK302773
IPI:IPI01011062 SMR:B4DZ67 STRING:B4DZ67 Ensembl:ENST00000539906
UCSC:uc010stj.2 Uniprot:B4DZ67
Length = 896
Score = 232 (86.7 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 74/219 (33%), Positives = 110/219 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHT--QRYLKKGVADANT-VHHLDF 155
+V WLE +A + + + Y N+ HT QR L V V LD
Sbjct: 240 VVDWLESIAKDEIGEFSDNIEFYAKSVYWENT---LHTLKQRQLTSYVGSVRPLVTELDP 296
Query: 156 DAPTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVI 214
DAP R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 297 DAPIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLY 355
Query: 215 DFSPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYA 273
P+V NG + ELE G+ +R +WK + + +E ++ +++E AIYA
Sbjct: 356 H-DPNV-----NGGT------ELEPVEGNPYRRIWKISCWRMAE---DELFNRYERAIYA 400
Query: 274 AQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
A NLK +LP+C WE WA + + ++ E+ S
Sbjct: 401 ALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTS 439
>UNIPROTKB|P57740 [details] [associations]
symbol:NUP107 "Nuclear pore complex protein Nup107"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IDA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0000776
"kinetochore" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0051292 "nuclear pore complex
assembly" evidence=IMP] [GO:0017056 "structural constituent of
nuclear pore" evidence=IMP] [GO:0000087 "M phase of mitotic cell
cycle" evidence=TAS] [GO:0000236 "mitotic prometaphase"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005975 "carbohydrate metabolic process"
evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR007252 Pfam:PF04121 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0044281 GO:GO:0015031 GO:GO:0005975
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0006406 GO:GO:0000236 GO:GO:0000777 GO:GO:0031080
GO:GO:0005487 EMBL:AJ295745 EMBL:BC043343 IPI:IPI00028005
RefSeq:NP_065134.1 UniGene:Hs.524574 PDB:3CQC PDB:3CQG PDB:3I4R
PDBsum:3CQC PDBsum:3CQG PDBsum:3I4R ProteinModelPortal:P57740
SMR:P57740 IntAct:P57740 MINT:MINT-3021765 STRING:P57740
PhosphoSite:P57740 DMDM:12230339 PaxDb:P57740 PeptideAtlas:P57740
PRIDE:P57740 Ensembl:ENST00000229179 GeneID:57122 KEGG:hsa:57122
UCSC:uc001suf.3 CTD:57122 GeneCards:GC12P069080 HGNC:HGNC:29914
HPA:HPA024141 MIM:607617 neXtProt:NX_P57740 PharmGKB:PA134890486
eggNOG:NOG258212 HOGENOM:HOG000006750 HOVERGEN:HBG052677
InParanoid:P57740 KO:K14301 OMA:NEKHTNL OrthoDB:EOG4JHCF2
PhylomeDB:P57740 EvolutionaryTrace:P57740 GenomeRNAi:57122
NextBio:63009 ArrayExpress:P57740 Bgee:P57740 CleanEx:HS_NUP107
Genevestigator:P57740 GermOnline:ENSG00000111581 PANTHER:PTHR13003
Uniprot:P57740
Length = 925
Score = 232 (86.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 74/219 (33%), Positives = 110/219 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHT--QRYLKKGVADANT-VHHLDF 155
+V WLE +A + + + Y N+ HT QR L V V LD
Sbjct: 269 VVDWLESIAKDEIGEFSDNIEFYAKSVYWENT---LHTLKQRQLTSYVGSVRPLVTELDP 325
Query: 156 DAPTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVI 214
DAP R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 326 DAPIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLY 384
Query: 215 DFSPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYA 273
P+V NG + ELE G+ +R +WK + + +E ++ +++E AIYA
Sbjct: 385 H-DPNV-----NGGT------ELEPVEGNPYRRIWKISCWRMAE---DELFNRYERAIYA 429
Query: 274 AQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
A NLK +LP+C WE WA + + ++ E+ S
Sbjct: 430 ALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTS 468
>MGI|MGI:2143854 [details] [associations]
symbol:Nup107 "nucleoporin 107" species:10090 "Mus musculus"
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=ISO]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006406 "mRNA export
from nucleus" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0017056
"structural constituent of nuclear pore" evidence=ISO] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031965 "nuclear
membrane" evidence=ISO] [GO:0034399 "nuclear periphery"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051292 "nuclear pore complex assembly" evidence=ISO]
InterPro:IPR007252 Pfam:PF04121 MGI:MGI:2143854 GO:GO:0015031
GO:GO:0006406 GO:GO:0000777 GO:GO:0031080 GO:GO:0005487 CTD:57122
eggNOG:NOG258212 HOGENOM:HOG000006750 HOVERGEN:HBG052677 KO:K14301
OMA:NEKHTNL OrthoDB:EOG4JHCF2 PANTHER:PTHR13003 EMBL:AK088069
EMBL:AK088303 EMBL:AK088625 EMBL:BC004655 EMBL:BC057591
IPI:IPI00221767 RefSeq:NP_598771.1 UniGene:Mm.12568
ProteinModelPortal:Q8BH74 SMR:Q8BH74 IntAct:Q8BH74 STRING:Q8BH74
PhosphoSite:Q8BH74 PaxDb:Q8BH74 PRIDE:Q8BH74
Ensembl:ENSMUST00000064848 GeneID:103468 KEGG:mmu:103468
UCSC:uc007hdo.1 GeneTree:ENSGT00390000012080 InParanoid:Q8BH74
ChiTaRS:NUP107 NextBio:355949 Bgee:Q8BH74 CleanEx:MM_NUP107
Genevestigator:Q8BH74 GermOnline:ENSMUSG00000052798 Uniprot:Q8BH74
Length = 926
Score = 231 (86.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 72/217 (33%), Positives = 109/217 (50%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHTQRYLKKGVADANT-VHHLDFDA 157
+V WLE +A + + + Y N+ + QR L + V LD DA
Sbjct: 270 VVDWLESIAKDEIGEFSDNIEFYAKSVYWENT-LHSLKQRQLLSHMGSTRPLVTELDPDA 328
Query: 158 PTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVIDF 216
P R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 329 PIRQKL-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYH- 386
Query: 217 SPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYAAQ 275
P+V NG + ELE G+ +R +WK + + +E ++ +K+E AIYAA
Sbjct: 387 DPNV-----NGGT------ELEPVEGNPYRRIWKISCWRMAE---DELFNKYERAIYAAL 432
Query: 276 CSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARS 312
NLK +LP+C WE WA + + ++ E+ S
Sbjct: 433 SGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTS 469
>UNIPROTKB|E1BDU0 [details] [associations]
symbol:NUP107 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005487 "nucleocytoplasmic transporter activity" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] InterPro:IPR007252 Pfam:PF04121 GO:GO:0000776
GO:GO:0005643 GO:GO:0006406 GO:GO:0005487 OMA:NEKHTNL
PANTHER:PTHR13003 GeneTree:ENSGT00390000012080 EMBL:DAAA02013251
EMBL:DAAA02013252 IPI:IPI00840349 Ensembl:ENSBTAT00000045218
Uniprot:E1BDU0
Length = 930
Score = 222 (83.2 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 74/223 (33%), Positives = 111/223 (49%)
Query: 100 IVQWLEGLASKSL-DLESKVRGSHVGTYLPNSGVWHHT--QRYLKKGVADANT-VHHLDF 155
+V WLE +A + D + Y N+ HT QR L + V LD
Sbjct: 269 VVDWLESIAKDEIGDFSDNIEFYAKSVYWENT---LHTLKQRQLSSYIGSVRPLVTELDP 325
Query: 156 DAPTREHAHQLPDDKKQDE-SLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLCPFGVI 214
DAP R+ L D ++DE LL+ ++TL+RAG EEA LC+ GQ WRAATL + +
Sbjct: 326 DAPIRQKM-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLY 384
Query: 215 DFSPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSKFEAAIYA 273
P+V NG + ELE G+ +R +WK + + +E ++ +++E AIYA
Sbjct: 385 H-DPNV-----NGGT------ELEPVEGNPYRCIWKISCWRMAE---DELFNRYERAIYA 429
Query: 274 AQCSNLKH----VLPICTNWETACWAMAKSWLGVQLDLELARS 312
A NLK +LP+C +WE WA + + ++ E+ S
Sbjct: 430 ALSGNLKQERVKLLPVCDSWEDTVWAYFRVMVDSLVEQEIRTS 472
>POMBASE|SPBC428.01c [details] [associations]
symbol:nup107 "nucleoporin Nup107" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IMP] [GO:0031080 "nuclear pore outer ring"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR007252 Pfam:PF04121 PomBase:SPBC428.01c GO:GO:0005829
GO:GO:0015031 EMBL:CU329671 GO:GO:0031965 GenomeReviews:CU329671_GR
GO:GO:0016973 GO:GO:0031080 GO:GO:0006407 eggNOG:NOG258212
PANTHER:PTHR13003 RefSeq:NP_001018780.2 IntAct:Q10331 STRING:Q10331
EnsemblFungi:SPBC428.01c.1 GeneID:3361255 OrthoDB:EOG473T1J
NextBio:20811355 Uniprot:Q10331
Length = 813
Score = 166 (63.5 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 57/194 (29%), Positives = 86/194 (44%)
Query: 150 VHHLDFDAPTREHAHQLPDDKKQDESLLEDVWTLLRAGRQEEACDLCRSAGQPWRAATLC 209
V +LD DA R+ D + + L R+G EE +LCR G WR+A+L
Sbjct: 225 VSNLDPDADIRDDKRLDERDDNFERQFFHTAFCLFRSGSFEELLELCRRTGNHWRSASLQ 284
Query: 210 PFGVIDFSPSVEALIKNGRSRTLQAIELESGIGHQWRLWKWASYCTSEKIFEQRGSKFEA 269
G++++ + LI + LQ+ E SG + L + T K R +E
Sbjct: 285 --GILEYRDN---LIDD----VLQS-ET-SGNKRKELLRRSCLALTKNK----RIDSYER 329
Query: 270 AIYAAQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLELARSQPGRMEQVKSFGDEIEG 329
A+Y A C +L VL +CT WE A WA S LD+ L+ P Q+ +
Sbjct: 330 ALYGALCGDLNSVLDVCTTWEDAMWAYYNSMTQYNLDVYLSSKAPQTETQLPPVDSGLGL 389
Query: 330 SPGQM-NGISQPSV 342
+P + N +S S+
Sbjct: 390 TPELIFNSLSNSSI 403
Score = 46 (21.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 493 VHMMELR-LNSSVHVKYKIFLSAMEYLPFSSGDDLKGSFEEIIERVLSRSREIKLGKYDK 551
VH + L+ + V YK + +E+L +S D F ++ R E+ YD
Sbjct: 565 VHTVYLKSIEEPVEPSYKKLICTLEWLLITSQTDELLRFANLVYRFFLSIGELN-SAYDL 623
Query: 552 STDV 555
T +
Sbjct: 624 YTHI 627
>FB|FBgn0027868 [details] [associations]
symbol:Nup107 "Nucleoporin 107kD" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0006406 "mRNA export
from nucleus" evidence=ISS] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=ISS] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0007184 "SMAD protein import into nucleus" evidence=IMP]
InterPro:IPR007252 Pfam:PF04121 GO:GO:0005635 GO:GO:0005643
GO:GO:0007184 PANTHER:PTHR13003 FlyBase:FBgn0027868 EMBL:EF057979
ProteinModelPortal:A1YK56 STRING:A1YK56 PRIDE:A1YK56
InParanoid:A1YK56 Bgee:A1YK56 Uniprot:A1YK56
Length = 846
Score = 139 (54.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 45/163 (27%), Positives = 81/163 (49%)
Query: 150 VHHLDFDAPTREHA--HQLPDDKKQDESLLEDVWTLLRAGRQEEACDLCRSAGQPWRAAT 207
V LD DAP RE H L D++ + L ++ L+RAGR ++ LC+ GQ WRAA
Sbjct: 233 VTRLDPDAPVREKRPLHAL--DEEDNLRLSRAIFELIRAGRVDDGLKLCKHFGQTWRAAI 290
Query: 208 LCPFGVIDFSPSVEALIKNGRSRTLQAIELESGIGHQWR-LWKWASYCTSEKIFEQRGSK 266
L + + + P+ E + S + + +E G+ R +WK ++ ++ S+
Sbjct: 291 LEGWRLHE-DPNFEQNV----SVLHEKLPIE---GNPRRDIWKRCAWMLADSKNYDEYSR 342
Query: 267 FEAAIYAAQCSNLKHVLPICTNWETACWAMAKSWLGVQLDLEL 309
A +++ +LK +L +NW WA K + ++++ E+
Sbjct: 343 ATAGVFSGHLGSLKTLLH--SNWHDLLWAHLKVQIDIRVESEI 383
Score = 69 (29.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 376 VTQVCKEQQRQIEMKLMLGNIPHVLQLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLV 435
V + Q I+ L+L ++Q + W+ E D + PH +RF AH+VL
Sbjct: 420 VRDFAQSQLGIIQRHLILDTCGELIQHMVRWV---EKDTSQQSPH----QLRFMAHIVLF 472
Query: 436 LRYLLTDELKDPFRKDLMDAGDLIIHMYAMFLFSEHHEELVGVYASQLARHRCIDLFVHM 495
LR + E + K I+ Y L + +L+ Y + L+ + L+
Sbjct: 473 LRQIGRVEQERQAEK--------IVAAYVEALIARGEPQLIAYYTASLSNPLQVQLYSRF 524
Query: 496 ME 497
+E
Sbjct: 525 LE 526
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 938 910 0.00089 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 635 (67 KB)
Total size of DFA: 488 KB (2226 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 79.84u 0.10s 79.94t Elapsed: 00:00:10
Total cpu time: 79.84u 0.10s 79.94t Elapsed: 00:00:10
Start: Mon May 20 23:45:16 2013 End: Mon May 20 23:45:26 2013