BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045473
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VY63|MPU12_ARATH Mannose-P-dolichol utilization defect 1 protein homolog 2
OS=Arabidopsis thaliana GN=At4g07390 PE=2 SV=1
Length = 235
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 139/174 (79%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITY 60
I+KI++H+S G+S FELEVV TI L Y + KG+PFSA+GE+ F+LIQ LILVA Y
Sbjct: 50 IMKIVQHKSVRGLSVVAFELEVVGYTISLAYCLHKGLPFSAFGEMAFLLIQALILVACIY 109
Query: 61 YYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYACQHITFLSARVPQIWKNFKNK 120
YYSQPV TWIR LLYCA+APT+LAGQINP LFE +YA QH FL AR+PQIWKNFKNK
Sbjct: 110 YYSQPVPVTTWIRPLLYCAVAPTVLAGQINPTLFEALYASQHAIFLFARLPQIWKNFKNK 169
Query: 121 STGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY 174
STG+LSFLT M+F G++VRVFTS+QEKAP +++ G +G + NG +L+Q++LY
Sbjct: 170 STGELSFLTFFMNFAGSIVRVFTSLQEKAPISILTGFALGVVTNGSILTQILLY 223
>sp|Q9LTI3|MPU11_ARATH Mannose-P-dolichol utilization defect 1 protein homolog 1
OS=Arabidopsis thaliana GN=At5g59470 PE=2 SV=1
Length = 239
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 147/188 (78%), Gaps = 4/188 (2%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITY 60
I+KI+ ++S G+S FELEV+ TI L Y + K +PFSA+GE+ F+LIQ LILVA Y
Sbjct: 50 IMKIVDNKSVKGLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIY 109
Query: 61 YYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYACQHITFLSARVPQIWKNFKNK 120
Y+SQP+ TW++A+LY AIAPT+ AG+I+P LFE +YA +H+ FLSAR+PQIWKNF+NK
Sbjct: 110 YFSQPLSVTTWVKAILYFAIAPTVFAGKIDPFLFEALYASKHLIFLSARIPQIWKNFRNK 169
Query: 121 STGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILYQKP--E 178
STGQLSFLTCLM+FGGA+ RVFTSIQEKAP ++++G + NGI++SQ++LY+ E
Sbjct: 170 STGQLSFLTCLMNFGGALARVFTSIQEKAPLSMLLGIVLSIFTNGIIMSQILLYRSKGNE 229
Query: 179 DK--KEKK 184
DK K KK
Sbjct: 230 DKLVKSKK 237
>sp|Q20157|MPU1_CAEEL Mannose-P-dolichol utilization defect 1 protein homolog
OS=Caenorhabditis elegans GN=F38E1.9 PE=3 SV=1
Length = 238
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITY 60
ILKI RSA GISA + L +V A YS + G FS +G+ FF+ +Q +I++ +
Sbjct: 53 ILKIQAARSAQGISAASQLLALVGAIGTASYSYRSGFVFSGWGDSFFVAVQLVIIILQIF 112
Query: 61 YYSQ----PVGTATWIRALLYCAIAPTILAGQINPVLFETIYACQHI---TFLSARVPQI 113
+S VG + A+ Y ++ +I P+ +T+ A Q + +++ QI
Sbjct: 113 LFSGQTMLSVGFLGIVSAVAYGVVSKSI------PM--QTLTAVQTAGIPIVVVSKLLQI 164
Query: 114 WKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMIL 173
+N++ +STGQLS ++ + F G + RVFTS+Q+ +++ + A++NG++ +Q +
Sbjct: 165 SQNYRAQSTGQLSLISVFLQFAGTLARVFTSVQDTGDMLLIVSYSTAAVLNGLIFAQFFM 224
Query: 174 YQKPEDKKEKKDE 186
Y + KK
Sbjct: 225 YWSHSESAAKKKR 237
>sp|Q9R0Q9|MPU1_MOUSE Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus
GN=Mpdu1 PE=2 SV=1
Length = 247
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITY 60
+ K+L +SA G+S + LE+VA T + YSI PFS++GE F+ +Q VAI +
Sbjct: 62 VFKLLGAKSAEGLSLQSVMLELVALTGTVVYSITNNFPFSSWGEALFLTLQT---VAICF 118
Query: 61 YYSQPVGTATWIRALLYC-AIAPTILAGQINPVLFETIYACQHI-TFLSARVPQIWKNFK 118
G A L C A+ L + P+ T+ ++ + ++ Q N++
Sbjct: 119 LVMHYRGETVKGVAFLACYAMVLLALLSPLTPLAVVTLLQASNVPAVVVGKLLQAATNYR 178
Query: 119 NKSTGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILYQKPE 178
N TGQLS +T M FGG++ R+FTS+QE + + +L NG++ +Q++ Y +
Sbjct: 179 NGHTGQLSAITVFMLFGGSLARIFTSVQETGDPLMAGVFVVSSLCNGLIAAQVLFYWNAK 238
Query: 179 DKKEKKDE 186
++K E
Sbjct: 239 APHKQKKE 246
>sp|Q9VMW8|MPU1_DROME Mannose-P-dolichol utilization defect 1 protein homolog
OS=Drosophila melanogaster GN=CG3792 PE=1 SV=2
Length = 252
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 6/187 (3%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITY 60
+LKIL +S GI+ L+++A + L Y+ G PFSA+G+ F+ IQ + + +
Sbjct: 57 VLKILNSKSGEGINIVGVVLDLLAISFHLSYNFMHGYPFSAWGDSTFLAIQTVTIAVLVL 116
Query: 61 YYSQPVGTATWIRALLYCAIAPTILAGQINP--VLFETIYACQHITFLSARVPQIWKNFK 118
+++ + L+ + +L + P VLF TI +C L ++ Q + N++
Sbjct: 117 FFNGRKAQSGLF--LVGYVVLMYVLNSGLTPMSVLF-TIQSCNIPILLVGKLSQAYTNYQ 173
Query: 119 NKSTGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY-QKP 177
STGQLS T +M F G++ R+FTSIQE +++ N ++L Q+I Y KP
Sbjct: 174 AGSTGQLSAATVIMMFAGSVARIFTSIQETGDFMIILTFIASTFANSVILGQLIYYWNKP 233
Query: 178 EDKKEKK 184
K K
Sbjct: 234 AGVKVKD 240
>sp|O75352|MPU1_HUMAN Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens
GN=MPDU1 PE=1 SV=2
Length = 247
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGL-ILVAIT 59
+ KIL +SA G+S + LE+VA T + YSI PFS++GE F+++Q + I +
Sbjct: 62 VFKILGAKSAEGLSLQSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVM 121
Query: 60 YYYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYACQHITFLSARVPQIWKNFKN 119
+Y Q V ++ Y + +L+ + + A + R+ Q N+ N
Sbjct: 122 HYRGQTVKGVAFLAC--YGLVLLVLLSPLTPLTVVTLLQASNVPAVVVGRLLQAATNYHN 179
Query: 120 KSTGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY--QKP 177
TGQLS +T + FGG++ R+FTSIQE + + +L NG++ +Q++ Y KP
Sbjct: 180 GHTGQLSAITVFLLFGGSLARIFTSIQETGDPLMAGTFVVSSLCNGLIAAQLLFYWNAKP 239
Query: 178 EDKKEK 183
K++K
Sbjct: 240 PHKQKK 245
>sp|Q60441|MPU1_CRIGR Mannose-P-dolichol utilization defect 1 protein OS=Cricetulus
griseus GN=MPDU1 PE=2 SV=2
Length = 247
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 1 ILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITY 60
I KIL +SA G+S + LE+VA T + YSI PFS++GE F+ +Q + + +
Sbjct: 62 IFKILGAKSAEGLSLQSVMLELVALTGTVIYSITNNFPFSSWGEALFLTLQTITICLLVL 121
Query: 61 YYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYACQHITFLSARVPQIWKNFKNK 120
+Y + A + + V+ + A + ++ Q N+ N
Sbjct: 122 HYRGDTVKGVALLACYATLLLALLSPLTPLAVV-TMLQASNVPAVVVGKLLQAATNYHNG 180
Query: 121 STGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY--QKPE 178
TGQLS +T M FGG++ R+FTS+QE + + +L NG++ +Q++ Y KP
Sbjct: 181 HTGQLSAITVFMLFGGSLARIFTSVQETGDPLMAGVFVVSSLCNGLIAAQVLFYWNAKPP 240
Query: 179 DKKEKKD 185
K +K+
Sbjct: 241 HKHKKEQ 247
>sp|P38279|RTC2_YEAST Protein RTC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=RTC2 PE=1 SV=1
Length = 296
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 103 ITFLSARVPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGAL 162
I +L +R+PQI NFK KS +SFL L + G + + + + ++GS L
Sbjct: 217 ILYLGSRIPQIVLNFKRKSCEGVSFLFFLFACLGNTSFIISVLS----ASWLIGSAGTLL 272
Query: 163 MNGIVLSQMILYQKPEDKK 181
M+ V Q LY KP+ +K
Sbjct: 273 MDFTVFIQFFLYAKPKYEK 291
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTS-IQEKAPTNVVMGSTMGALMNGIVL 168
VPQI++NF+ +S LS L ++ G + V + +Q PT +++ + L + I+L
Sbjct: 30 VPQIYENFRRQSAEGLSLLFIVLWLLGDIFNVMGAMMQNLLPTMIILAAYY-TLADLILL 88
Query: 169 SQMILYQK 176
Q + Y K
Sbjct: 89 IQCMWYDK 96
>sp|Q54WT7|CTNS_DICDI Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1
Length = 284
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 98 YACQHITFLSARVPQIWKNFKNKSTGQLSFLTCLMSFGG---AMVRVFTSIQEKAPTNVV 154
Y ITF+ +PQ + NFKNKST S L+ F G +++++F + + N+
Sbjct: 151 YVKLFITFIK-YIPQAYLNFKNKSTSGWSVHNVLLDFSGGVLSLLQMFLDVADSGNWNIF 209
Query: 155 MGS--TMGALMNGI------VLSQMILYQKPEDK 180
G +G + I ++ ILY+ P+ K
Sbjct: 210 TGDPVKLGLSLFSIAFDILFIIQHYILYRNPKSK 243
>sp|Q12010|YO092_YEAST Uncharacterized membrane protein YOL092W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOL092W PE=1
SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 103 ITFLSARVPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFT----SIQEK---APTNVVM 155
+ +L +R+PQI NFK KS +SFL L + G +F+ S+ K + ++
Sbjct: 221 LLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDWKYLIMNASWLV 280
Query: 156 GSTMGALMNGIVLSQMILYQK 176
GS M+ ++ SQ +Y++
Sbjct: 281 GSIGTLFMDFVIFSQFFIYKR 301
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLS 169
VPQI++NF KS+ LS L ++ G + + ++ + + +++ + + + I+L
Sbjct: 30 VPQIYENFYRKSSDGLSLLFVVLWLAGDVFNLMGAVMQHLLSTMIILAAYYTVADIILLG 89
Query: 170 QMILYQKPE 178
Q + Y E
Sbjct: 90 QCLWYDNEE 98
>sp|Q5ZJX0|LAAT1_CHICK Lysosomal amino acid transporter 1 homolog OS=Gallus gallus
GN=PQLC2 PE=2 SV=1
Length = 303
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 36/128 (28%)
Query: 37 IPFSAYGEVFFILIQGLILVAITYYYSQPVGT---ATWIRALLYC----AIAPTILAGQI 89
+P Y V+++L ++L YY ++ GT A+ A L+C A T+L+
Sbjct: 97 LPLQVYTAVYYVLADLVMLSLYGYYKAKNWGTGATASINAACLFCLLGTATTLTVLSHDT 156
Query: 90 ----NPVLFE-------------------------TIYACQHITFLSARVPQIWKNFKNK 120
NP F I + + +L +R+PQI+ N++ K
Sbjct: 157 GPAPNPAAFGGRSLLSLGLEGPGPEPISKTEIIGFAIGSISSVLYLCSRLPQIYTNYRRK 216
Query: 121 STGQLSFL 128
ST +SFL
Sbjct: 217 STAGVSFL 224
>sp|Q8C6U2|PQLC3_MOUSE PQ-loop repeat-containing protein 3 OS=Mus musculus GN=Pqlc3 PE=2
SV=1
Length = 202
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 5 LKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYSQ 64
L RSA GIS + LE+ + L Y G P Y E ++ Q ++L+ ++++
Sbjct: 29 LAARSARGISLPSLLLELAGFLVFLRYQHYYGNPLLTYLEYPILIAQDIVLLLFVFHFNG 88
Query: 65 PVGTATWIRALLYCAIAPT---ILAGQINPVLFETIYACQHITFLSARVPQIWKNFKNKS 121
V +AL Y A+ + IL+ Q ++ + C I+ +++ Q+ +K +
Sbjct: 89 NVK-----QALPYMAVFVSSWFILSLQ-KWIIDLAMNLCTVIS-AASKFAQLQYLWKVQD 141
Query: 122 TGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILYQKPEDKK 181
+G +S LT +S R+ T++ +++ + +N V + ++ Y+K K
Sbjct: 142 SGAVSALTWGLSAYTCATRIITTLMTTNDLTILIRFVIMLALNIWVTATVLHYRKSATKA 201
Query: 182 E 182
E
Sbjct: 202 E 202
>sp|Q6NRS2|PQLC1_XENLA PQ-loop repeat-containing protein 1 OS=Xenopus laevis GN=pqlc1 PE=2
SV=1
Length = 250
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 71 WIRALLY--CAIAPTILAGQINPVLFETIYACQHITFLSAR------VPQIWKNFKNKST 122
W R + + C +A T + G I +L ++ + + FL+ VPQ+++N +N ST
Sbjct: 122 WTRFIDFIQCVLAFTGVTGYITYLLLDSPLFVEILGFLAVFTEALLGVPQLYRNHQNYST 181
Query: 123 GQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY----QKP 177
+S LM G + + +AP + + ++ +L Q+ LY QKP
Sbjct: 182 EGMSIKMVLMWTSGDTFKSAYFVLNQAPFQFSICGLLQVFVDIAILLQVYLYSAYPQKP 240
>sp|B1Y818|LGT_LEPCP Prolipoprotein diacylglyceryl transferase OS=Leptothrix cholodnii
(strain ATCC 51168 / LMG 8142 / SP-6) GN=lgt PE=3 SV=1
Length = 277
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 63 SQPVGTATWIRALLYCAIAPTILAGQINPVLF-ETIYACQHITFLSARVPQIWKNFKNKS 121
S P TA + LL+ + IL G++ VLF + Y +++ +P +WK
Sbjct: 50 SGPAWTARDVEDLLFFGVVGVILGGRLGYVLFYKPTYYLANLS----EIPAVWKGGMAFH 105
Query: 122 TGQLSFLTCLMSFGGAMVRVFTSIQEK----APTNVVMGSTMGALMNG 165
G L + + F R F + + PT + MG +G +NG
Sbjct: 106 GGLLGVIVAMALFAHLRGRKFFEVTDLVAPCVPTGLAMGR-IGNFING 152
>sp|B1KJA5|RAPA_SHEWM RNA polymerase-associated protein RapA OS=Shewanella woodyi (strain
ATCC 51908 / MS32) GN=rapA PE=3 SV=1
Length = 968
Score = 31.2 bits (69), Expect = 3.8, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 122 TGQLSFLTCLMSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNG 165
TG++ + S G R+F +K P V + +GA+MNG
Sbjct: 414 TGRVLYRNSRASVKGFPTRIFNQYPQKMPAQYVTAARVGAMMNG 457
>sp|Q5M880|PQLC1_RAT PQ-loop repeat-containing protein 1 OS=Rattus norvegicus GN=Pqlc1
PE=2 SV=2
Length = 271
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 78 CAIAPTILAGQINPVLFETIYACQHITFLSAR------VPQIWKNFKNKSTGQLSFLTCL 131
C +A T +AG I + ++ + + FL+ VPQ+++N++++ST +S L
Sbjct: 149 CVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNYRHRSTEGMSLKMVL 208
Query: 132 MSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY----QKP 177
M G + + AP + + +++ +L Q + QKP
Sbjct: 209 MWTSGDTFKTAYFLLNGAPLQFSVCGLLQVMVDLAILGQAYAFAHHPQKP 258
>sp|Q6HI21|UPPP4_BACHK Undecaprenyl-diphosphatase 4 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=uppP4 PE=3 SV=1
Length = 259
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI-QEKA----PTNVVMGSTMGALMN 164
V +W+ ++ SFL + GA++ F + Q KA T++++G+ A
Sbjct: 161 VAALWRKLDRETAAYFSFLLSTPAIVGAIILQFADVFQGKAESISSTSLIVGTLSAAFFG 220
Query: 165 GIVLSQMILYQKPEDKK 181
I +S MI Y K K
Sbjct: 221 YIAVSWMIQYLKRHSLK 237
>sp|P62463|UPPP3_BACC1 Undecaprenyl-diphosphatase 3 OS=Bacillus cereus (strain ATCC 10987)
GN=uppP3 PE=3 SV=1
Length = 259
Score = 30.4 bits (67), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI-QEKA----PTNVVMGSTMGALMN 164
V +W+ ++ SFL + GA++ F + Q KA T++++G+ A
Sbjct: 161 VAALWRKLDRETAAYFSFLLSTPAIVGAIILQFVDVFQGKAESISSTSLIVGTLSAAFFG 220
Query: 165 GIVLSQMILYQKPEDKK 181
I +S MI Y K K
Sbjct: 221 YIAVSWMIQYLKRHSLK 237
>sp|A0RET0|UPPP4_BACAH Undecaprenyl-diphosphatase 4 OS=Bacillus thuringiensis (strain Al
Hakam) GN=uppP4 PE=3 SV=1
Length = 259
Score = 30.4 bits (67), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI-QEKAP----TNVVMGSTMGALMN 164
V +W+ ++ SFL + GA++ F + Q KA T++++G+ A
Sbjct: 161 VAALWRKLDRETAAYFSFLLSTPAIVGAIILQFADVFQGKAESISNTSLIVGTLSAAFFG 220
Query: 165 GIVLSQMILYQKPEDKK 181
I +S MI Y K K
Sbjct: 221 YIAVSWMIQYLKRHSLK 237
>sp|Q63AN4|UPPP4_BACCZ Undecaprenyl-diphosphatase 4 OS=Bacillus cereus (strain ZK / E33L)
GN=uppP4 PE=3 SV=1
Length = 259
Score = 30.4 bits (67), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI-QEKA----PTNVVMGSTMGALMN 164
V +W+ ++ SFL + GA++ F + Q KA T++++G+ A
Sbjct: 161 VAALWRKLDRETAAYFSFLLSTPAIVGAIILQFVDVFQGKAESISSTSLIVGTLSAAFFG 220
Query: 165 GIVLSQMILYQKPEDKK 181
I +S MI Y K K
Sbjct: 221 YIAVSWMIQYLKRHSLK 237
>sp|Q81CP1|UPPP3_BACCR Undecaprenyl-diphosphatase 3 OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=uppP3 PE=3 SV=1
Length = 259
Score = 30.4 bits (67), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 110 VPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI-QEKA----PTNVVMGSTMGALMN 164
V +W+ ++ SFL + GA++ F + Q KA T++++G+ A
Sbjct: 161 VAALWRKLDRETAAYFSFLLSTPAIVGAIILQFVDVFQGKAESISSTSLIVGTLSAAFFG 220
Query: 165 GIVLSQMILYQKPEDKK 181
I +S MI Y K K
Sbjct: 221 YIAVSWMIQYLKRHSLK 237
>sp|Q80XM9|PQLC1_MOUSE PQ-loop repeat-containing protein 1 OS=Mus musculus GN=Pqlc1 PE=2
SV=1
Length = 271
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 78 CAIAPTILAGQINPVLFETIYACQHITFLSAR------VPQIWKNFKNKSTGQLSFLTCL 131
C +A T +AG I + ++ + + FL+ VPQ+++N+ ++ST +S L
Sbjct: 149 CVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNYCHRSTEGMSLKMVL 208
Query: 132 MSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILY----QKP 177
M G + + AP + + +++ ++L Q + QKP
Sbjct: 209 MWTSGDTFKTAYFLLNGAPLQFSVCGLLQVMVDLVILGQAYAFAHHPQKP 258
>sp|Q0VCC1|PQLC1_BOVIN PQ-loop repeat-containing protein 1 OS=Bos taurus GN=PQLC1 PE=2
SV=1
Length = 253
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 78 CAIAPTILAGQINPVLFETIYACQHITFLSAR------VPQIWKNFKNKSTGQLSFLTCL 131
C +A T +AG I + ++ + + FL+ VPQ+++N +++ST +S L
Sbjct: 131 CVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVL 190
Query: 132 MSFGGAMVRVFTSIQEKAPTNVVMGSTMGALMNGIVLSQMILYQK 176
M G + + AP + + L++ +L Q ++ +
Sbjct: 191 MWTSGDTFKTAYFLLNGAPLQFSVCGLLQVLVDLAILGQAYVFTR 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,424,447
Number of Sequences: 539616
Number of extensions: 2326531
Number of successful extensions: 7299
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7272
Number of HSP's gapped (non-prelim): 35
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (26.6 bits)