BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045475
(662 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4
PE=2 SV=2
Length = 928
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 216/376 (57%), Gaps = 36/376 (9%)
Query: 120 VHPKFLHSNATSHKWALGAFAELLDNSLD-EVCNGATYVQVDLLKNKTDGTHMLLVEDNG 178
+ P++L SN++SH A AELLDN++D +V ++ V+ +K K L D+G
Sbjct: 35 MSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKP----CLTFTDDG 90
Query: 179 GGMTPDKMRQCMSLGYSAK--SKLANTIGQYGNGFKTSTMRLGADVIVFSRCQGTDGKCS 236
GMTP K+ + +S G++ K K IG +GNGFK+ +MRLG D +VF++ +G +
Sbjct: 91 CGMTPHKLHRMLSFGFTDKVIKKSQRPIGVFGNGFKSGSMRLGKDALVFTK----NG--N 144
Query: 237 TQSIGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSRNLETVVQWSPYTS 296
T ++G+LS T+L + ++VP+V + ++ + M+V ED +LE ++ +S +
Sbjct: 145 TLAVGLLSQTYLECIQAQAVIVPIVPFSQQNKK--MIVT---EDSLPSLEAILNYSIFNC 199
Query: 297 EEDLTQQFNFMK-DQGTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRGVNREEKNI-EMAK 354
E+DL QF+ + +GTR++++N+ + +GK E+DFD+D +DI + + EEK I +
Sbjct: 200 EKDLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDAEEKEIGGVTS 259
Query: 355 KYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDMMLIKELRYKPTS 414
+ P + +SLR++ SILY++ P +I LR + V I + ++ YKPTS
Sbjct: 260 ELPET------EYSLRAFCSILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDIYKPTS 311
Query: 415 LPERMAANVTIGFVKDAHYHIDIQGFNVYHKNRLIKPFWRV---WNAAGSDGRGAIGVLE 471
+++ +T GF YH G +YH NRLIK F + +G G IGV+E
Sbjct: 312 TNKQV--RITFGF--SCKYHNQF-GVMMYHNNRLIKAFEKAGCQLKPTCGEGVGVIGVIE 366
Query: 472 ANFVEPAHDKQGFERT 487
NF++PA++KQ FE T
Sbjct: 367 CNFLKPAYNKQDFEYT 382
>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4
PE=1 SV=2
Length = 937
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 229/425 (53%), Gaps = 42/425 (9%)
Query: 112 SVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLD-EVCNGATYVQVDLLKNKTDGTH 170
+ G+ + P++L SN++SH A AELLDN++D +V ++ V+ +KNK+
Sbjct: 27 AFGIRLSTMSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKS---- 82
Query: 171 MLLVEDNGGGMTPDKMRQCMSLGYSAK--SKLANTIGQYGNGFKTSTMRLGADVIVFSRC 228
L D+G GMTP K+ + +S G++ K K IG +GNGFK+ +MRLG D +VF++
Sbjct: 83 CLTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGKDALVFTKN 142
Query: 229 QGTDGKCSTQSIGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSRNLETV 288
GT ++G+LS T+L + ++VP+V + ++ + M++ ED +LE +
Sbjct: 143 GGT------LTVGLLSQTYLECVQAQAVIVPIVPFNQQNKK--MIIT---EDSLPSLEAI 191
Query: 289 VQWSPYTSEEDLTQQFNFMK-DQGTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRGVNREE 347
+ +S + E DL QF+ + +GTR++++N+ + GK E+DFD+D +DI + + EE
Sbjct: 192 LNYSIFNRENDLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDILVSDFDTEE 251
Query: 348 KNI-EMAKKYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDMMLIK 406
K + + P + +SLR++ ILY++ P +I LR + V I + ++
Sbjct: 252 KMTGGVTSELPET------EYSLRAFCGILYMK--PRMKIFLRQKKVTTQMIAKSLANVE 303
Query: 407 ELRYKPTSLPERMAANVTIGF-VKDAHYHIDIQGFNVYHKNRLIKPFWRV---WNAAGSD 462
YKPT +++ +T GF K+++ G +YH NRLIK F +V +
Sbjct: 304 YDTYKPTFTNKQV--RITFGFSCKNSNQF----GIMMYHNNRLIKSFEKVGCQVKPTRGE 357
Query: 463 GRGAIGVLEANFVEPAHDKQGFERTP----VLARLEARLVAIQKEYWCTNCHEVGYAPRR 518
G G IGV+E NF++PA++KQ FE T + L +L A KE + E R
Sbjct: 358 GVGVIGVIECNFLKPAYNKQDFEYTKEYRLTINALAQKLNAYWKEKTSQDNFETSTVARP 417
Query: 519 HSKTP 523
K P
Sbjct: 418 IPKVP 422
>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3
PE=1 SV=3
Length = 939
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 212/384 (55%), Gaps = 53/384 (13%)
Query: 122 PKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGM 181
PKFLH+N+TSH W A AEL+DN+ D N Q+ + K + L DNG GM
Sbjct: 16 PKFLHTNSTSHTWPFSAVAELIDNAYDPDVNAK---QIWIDKTVINDHICLTFTDNGNGM 72
Query: 182 TPDKMRQCMSLGYSAKSKLAN--TIGQYGNGFKTSTMRLGADVIVFSRCQGTDGKCSTQS 239
T DK+ + +S G+S K + +G YGNGFK+ +MRLG D IVF++ +G+ + S
Sbjct: 73 TSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFTK----NGE--SMS 126
Query: 240 IGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSRNLETVVQWSPYTSEED 299
+G+LS T+L E +VVP+V + K H M+ + + +L +++ S +++E+
Sbjct: 127 VGLLSQTYLEVIKAEHVVVPIVAFNK---HRQMI---NLAESKASLAAILEHSLFSTEQK 180
Query: 300 LTQQFN-FMKDQGTRIVMYNLWEDDEGKLEMDFDSDPHDIQL----------RGVNREEK 348
L + + + +GTRI+++NL + E DF+ D +DI++ +G ++E+
Sbjct: 181 LLAELDAIIGKKGTRIIIWNL-RSYKNATEFDFEKDKYDIRIPEDLDEITGKKGYKKQER 239
Query: 349 NIEMAKKYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDMMLIKEL 408
++A P S +SLR+Y SILYL+ P +IILRGQ V+ + + I+
Sbjct: 240 MDQIA---PES------DYSLRAYCSILYLK--PRMQIILRGQKVKTQLVSKSLAYIERD 288
Query: 409 RYKPTSLPERMAANVTIGF---VKDAHYHIDIQGFNVYHKNRLIKPFWRVWNA--AGSDG 463
Y+P L + +T GF KD HY G +YH+NRLIK + +V A + G
Sbjct: 289 VYRPKFLSK--TVRITFGFNCRNKD-HY-----GIMMYHRNRLIKAYEKVGCQLRANNMG 340
Query: 464 RGAIGVLEANFVEPAHDKQGFERT 487
G +G++E NF++P H+KQ F+ T
Sbjct: 341 VGVVGIIECNFLKPTHNKQDFDYT 364
>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 OS=Mus musculus GN=Morc1
PE=2 SV=1
Length = 950
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 210/475 (44%), Gaps = 108/475 (22%)
Query: 115 MDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT-DGTHMLL 173
+ ++H F+H+N+T+H + GA AELLDN+ D GA + V + N+T G ML
Sbjct: 7 LQRAKLHLDFIHANSTTHSFLFGALAELLDNARDA---GAVRLDVFSVDNETLQGGFMLC 63
Query: 174 VEDNGGGMTPDKMRQCMSLGYSAKSKLANT--IGQYGNGFKTSTMRLGADVIVFSRCQGT 231
D+G GM+PD+ + G ++K +L+ IGQYGNG K+ +MR+G D I+F++
Sbjct: 64 FLDDGCGMSPDEASDVIYFG-TSKKRLSTLKFIGQYGNGLKSGSMRIGKDCILFTK---- 118
Query: 232 DGKCSTQSIGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSRNLETVVQW 291
K T + S TF G ++VVP+ + R + P+ + L + ++
Sbjct: 119 --KEETMTCLFFSQTFCEKEGLTEVVVPIPSWLTRTRES---ITDDPQKFFTELSIIFKY 173
Query: 292 SPYTSEEDLTQQFNFMKDQ-GTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRGVNREEKNI 350
SP+ +E +L QQF+ + + GT +++YNL G+ E+D +D DI +
Sbjct: 174 SPFKTEAELMQQFDMIYGRCGTLLIIYNLKLLLSGEPELDVTTDKEDILM---------A 224
Query: 351 EMAKKYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDM-------- 402
E ++ P R F R+Y ++LY P +I ++ + V+ ++ +
Sbjct: 225 EAPEEIPERRSF-------RAYTAVLYFE--PRMKIFIQAKRVQTKHLCYSLYKPRKYQY 275
Query: 403 ------------------------MLIKELRYKPTSLPERMAANVTIGFVKDAHYHIDIQ 438
+L KE++ K + P+R+A + T ++ A +D +
Sbjct: 276 TTSSFKGKFKTEVQKAEEAVKRAELLFKEVQAK-VNQPDRIALSSTQDALQKALQDVDTK 334
Query: 439 -------------------------------GFNVYHKNRLIKPFWRV---WNAAGSDGR 464
G +Y NRLIK + +V G
Sbjct: 335 HKSLRQKQRALRKARTLSLFFGVNTEDQHQAGMFIYSNNRLIKMYEKVGPQLKMKSLLGA 394
Query: 465 GAIGVLEANF--VEPAHDKQGFERTPVLARLEARLVAIQKEYWCTNCHEVGYAPR 517
G IG++ +EP+H+KQ F + + L+ + +Y C ++G + R
Sbjct: 395 GIIGIVNIPLETMEPSHNKQEF----LNVQEYNHLLKVMGQYLIQYCKDIGISNR 445
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2
PE=1 SV=2
Length = 1032
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 158/312 (50%), Gaps = 37/312 (11%)
Query: 108 SLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKTD 167
+ +N ++ ++ ++LH+N+T+H++ GA AEL+DN+ D A ++D+ + +
Sbjct: 2 AFTNYSSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERRE 56
Query: 168 ---GTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANT-IGQYGNGFKTSTMRLGADVI 223
G ML D+G GM P + G SAK +T IGQYGNG K+ +MR+G D I
Sbjct: 57 DLRGGFMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFI 116
Query: 224 VFSRCQGTDGKCSTQSIGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSR 283
+F++ K T + LS TF G ++++VP+ + R V + E ++
Sbjct: 117 LFTK------KEDTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTRE---PVTDNVEKFAI 167
Query: 284 NLETVVQWSPYTSEEDLTQQF-NFMKDQGTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRG 342
E + ++SP+ +EE++ QF D GT ++++NL D G+ E+D S+P DIQ+
Sbjct: 168 ETELIYKYSPFRTEEEVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAE 227
Query: 343 VNREEKNIEMAKKYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDM 402
+ E E R S R+YA++LY+ P RI + G V+ +
Sbjct: 228 TSPEGTKPE--------------RRSFRAYAAVLYID--PRMRIFIHGHKVQTKRL--SC 269
Query: 403 MLIKELRYKPTS 414
L K YK TS
Sbjct: 270 CLYKPRMYKYTS 281
>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A OS=Mus musculus
GN=Morc2a PE=1 SV=2
Length = 1030
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 157/312 (50%), Gaps = 37/312 (11%)
Query: 108 SLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKTD 167
+ +N ++ ++ ++LH+N+T+H++ GA AEL+DN+ D A ++D+ + +
Sbjct: 2 AFTNYSSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERRE 56
Query: 168 ---GTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANT-IGQYGNGFKTSTMRLGADVI 223
G ML D+G GM P + G SAK +T IGQYGNG K+ +MR+G D I
Sbjct: 57 DLRGGFMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFI 116
Query: 224 VFSRCQGTDGKCSTQSIGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSR 283
+F++ K T + LS TF G ++++VP+ + R + + E ++
Sbjct: 117 LFTK------KEDTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTRE---PITDNVEKFAI 167
Query: 284 NLETVVQWSPYTSEEDLTQQF-NFMKDQGTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRG 342
E V ++SP+ +EE + QF + GT ++++NL D G+ E+D S+P DIQ+
Sbjct: 168 ETELVYKYSPFHTEEQVMNQFMKIPGNSGTLVIIFNLKLMDNGEPELDIISNPKDIQMAE 227
Query: 343 VNREEKNIEMAKKYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDM 402
+ E E R S R+YA++LY+ P RI + G V+ +
Sbjct: 228 TSPEGTKPE--------------RRSFRAYAAVLYID--PRMRIFIHGHKVQTKRL--SC 269
Query: 403 MLIKELRYKPTS 414
L K YK TS
Sbjct: 270 CLYKPRMYKYTS 281
>sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B OS=Mus musculus
GN=Morc2b PE=2 SV=2
Length = 1022
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 161/312 (51%), Gaps = 37/312 (11%)
Query: 108 SLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKTD 167
+ +N ++ ++ +LH+N+T+H + GA AEL+DN+ D A ++D+ K +
Sbjct: 2 AFTNYSTLNRAQLTFDYLHTNSTTHAFLFGALAELIDNARD-----ADATRIDIYAEKRE 56
Query: 168 ---GTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANT-IGQYGNGFKTSTMRLGADVI 223
G ML DNG GM P+ + + G SAK +T IG+YGNG K+ +MR+G D I
Sbjct: 57 DLQGGFMLCFLDNGVGMDPNDVINVIQFGKSAKRTPESTQIGRYGNGLKSGSMRIGKDFI 116
Query: 224 VFSRCQGTDGKCSTQSIGMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSR 283
+F++ K +T S LS TF G ++++VP+ + + V + E ++
Sbjct: 117 LFTK------KENTMSCLFLSRTFHEEEGIDEVIVPLPTWNSQTRE---PVTDNMEKFAI 167
Query: 284 NLETVVQWSPYTSEEDLTQQFNFMK-DQGTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRG 342
E + ++SP+ +EE++ QF + GT +V++NL D G+ E+D S+P DI++
Sbjct: 168 ETELIYKYSPFHTEEEVMTQFTKISGTSGTLVVIFNLKLTDNGEPELDVTSNPKDIRMAE 227
Query: 343 VNREEKNIEMAKKYPNSRHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIVNDM 402
+++E E RHS +YA++LY+ P RI + G V+ +
Sbjct: 228 ISQEGVKPE--------------RHSFCAYAAVLYID--PRMRIFIHGHKVQTKKLC--C 269
Query: 403 MLIKELRYKPTS 414
L K +Y TS
Sbjct: 270 CLYKPRKYTFTS 281
>sp|Q86VD1|MORC1_HUMAN MORC family CW-type zinc finger protein 1 OS=Homo sapiens GN=MORC1
PE=2 SV=2
Length = 984
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 35/280 (12%)
Query: 124 FLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKN-KTDGTHMLLVEDNGGGMT 182
F+H+N+T+H + GA AELLDN+ D GA + V + N K G ML D+G GM+
Sbjct: 17 FIHANSTTHSFLFGALAELLDNARDA---GAERLDVFSVDNEKLQGGFMLCFLDDGCGMS 73
Query: 183 PDKMRQCMSLGYSAKSKLANT--IGQYGNGFKTSTMRLGADVIVFSRCQGTDGKCSTQSI 240
P++ + G S K +L+ IGQYGNG K+ +MR+G D I+F++ K T +
Sbjct: 74 PEEASDIIYFGRS-KKRLSTLKFIGQYGNGLKSGSMRIGKDFILFTK------KEETMTC 126
Query: 241 GMLSYTFLRGTGKEDIVVPMVDYEKRGEHWDMLVRSSPEDWSRNLETVVQWSPYTSEEDL 300
S TF ++VVPM + R V P+ ++ L + ++SP+ +E +L
Sbjct: 127 VFFSQTFCEEESLSEVVVPMPSWLIRTRES---VTDDPQKFAMELSIIYKYSPFKTEAEL 183
Query: 301 TQQFNFMKDQ-GTRIVMYNLWEDDEGKLEMDFDSDPHDIQLRGVNREEKNIEMAKKYPNS 359
QQF+ + + GT +V+YNL G+ E+D +D DI + G + +P
Sbjct: 184 MQQFDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILMAGA---------LEDFP-- 232
Query: 360 RHFLTYRHSLRSYASILYLRLPPGFRIILRGQDVEHHNIV 399
R S R+Y S+LY P RI ++ + V+ ++
Sbjct: 233 -----ARWSFRAYTSVLYFN--PWMRIFIQAKRVKTKHLC 265
>sp|Q8PJX2|MUTL_XANAC DNA mismatch repair protein MutL OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=mutL PE=3 SV=1
Length = 625
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V ++L + G ++ + DNGGG+TPD++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGITPDEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q6P5D8|SMHD1_MOUSE Structural maintenance of chromosomes flexible hinge
domain-containing protein 1 OS=Mus musculus GN=Smchd1
PE=1 SV=2
Length = 2007
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 138 AFAELLDNSLDEVC--NGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKM 186
A AEL+DNSL NG +Q+ LL ++T G + V DNG GMT ++
Sbjct: 144 ALAELIDNSLSATSRNNGVRRIQIKLLFDETQGKPAVAVVDNGRGMTSKQL 194
>sp|A5V3J3|MUTL_SPHWW DNA mismatch repair protein MutL OS=Sphingomonas wittichii (strain
RW1 / DSM 6014 / JCM 10273) GN=mutL PE=3 SV=1
Length = 594
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 138 AFAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAK 197
A EL++NS+D GA + V L + G + V D+G GMTPD++ ++L A
Sbjct: 26 ALKELVENSIDA---GARRISVSLSEG---GLSAIDVADDGCGMTPDEI--ALALERHAT 77
Query: 198 SKLAN-------TIGQYGNGFKTSTMRLG--ADVIVFSRCQGTDG 233
SKL + T+G G + +G AD+ + SR +G DG
Sbjct: 78 SKLPDDAIEAVTTLGFRGEALPS----IGSVADLTIESRVRGADG 118
>sp|Q1I447|MUTL_PSEE4 DNA mismatch repair protein MutL OS=Pseudomonas entomophila (strain
L48) GN=mutL PE=3 SV=1
Length = 632
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
ELL+NSLD +GA ++V++ + G +L V DNGGG+ PD + ++L A SK+
Sbjct: 33 ELLENSLD---SGARRIEVEV---EQGGVKLLRVRDNGGGIAPDDL--PLALARHATSKI 84
>sp|A6TKN0|HTPG_ALKMQ Chaperone protein HtpG OS=Alkaliphilus metalliredigens (strain
QYMF) GN=htpG PE=3 SV=1
Length = 626
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 171 MLLVEDNGGGMTPDKMR-------QCMSLGYSAKSKLA---NTIGQYGNGFKTSTMRLGA 220
ML++ D G GMT +++ Q S + ++++ + IGQ+G GF ++ M +
Sbjct: 72 MLIISDMGIGMTKEELEENLGVIAQSGSFTFKKENEIKDGFDIIGQFGVGFYSAFM-VAD 130
Query: 221 DVIVFSRCQGTDGKCSTQSIGMLSYT 246
V V S+ G+D +SIG YT
Sbjct: 131 SVTVISKALGSDQGYKWESIGAEGYT 156
>sp|Q3BSD0|MUTL_XANC5 DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=mutL PE=3 SV=1
Length = 625
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V ++L + G ++ + DNGGG+ PD++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q8P8E4|MUTL_XANCP DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=mutL PE=3 SV=1
Length = 624
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V +DL + G ++ + DNGGG+ P+++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIDL---EEGGVRLIRIRDNGGGIAPEEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|B0RRZ8|MUTL_XANCB DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
campestris (strain B100) GN=mutL PE=3 SV=1
Length = 624
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V +DL + G ++ + DNGGG+ P+++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIDL---EEGGVRLIRIRDNGGGIAPEEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q4UVP3|MUTL_XANC8 DNA mismatch repair protein MutL OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=mutL PE=3 SV=1
Length = 624
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V +DL + G ++ + DNGGG+ P+++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIDL---EEGGVRLIRIRDNGGGIAPEEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q5GZ85|MUTL_XANOR DNA mismatch repair protein MutL OS=Xanthomonas oryzae pv. oryzae
(strain KACC10331 / KXO85) GN=mutL PE=3 SV=1
Length = 625
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V ++L + G ++ + DNGGG+ PD++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|B2SHP8|MUTL_XANOP DNA mismatch repair protein MutL OS=Xanthomonas oryzae pv. oryzae
(strain PXO99A) GN=mutL PE=3 SV=1
Length = 625
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V ++L + G ++ + DNGGG+ PD++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q2P295|MUTL_XANOM DNA mismatch repair protein MutL OS=Xanthomonas oryzae pv. oryzae
(strain MAFF 311018) GN=mutL PE=3 SV=1
Length = 625
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT V ++L + G ++ + DNGGG+ PD++ +++ A SK+
Sbjct: 29 ELVENALDA---GATRVDIEL---EEGGVRLIRIRDNGGGIAPDEL--PLAVSRHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q9JYT2|MUTL_NEIMB DNA mismatch repair protein MutL OS=Neisseria meningitidis
serogroup B (strain MC58) GN=mutL PE=3 SV=1
Length = 658
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 138 AFAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAK 197
A E+++NS+D GAT ++V+L G ++ V DNGGG+ PD + + ++K
Sbjct: 27 ALKEIVENSIDA---GATAIEVELAGG---GIRLIRVSDNGGGIHPDDIELALHRHATSK 80
Query: 198 SKLANTIGQYGN-GFK 212
K N + + GF+
Sbjct: 81 IKTLNDLEHVASMGFR 96
>sp|A1BFP7|HTPG_CHLPD Chaperone protein HtpG OS=Chlorobium phaeobacteroides (strain DSM
266) GN=htpG PE=3 SV=1
Length = 626
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 170 HMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL---------------ANTIGQYGNGFKTS 214
H +++EDNG GMT +++ ++LG A+S N IGQ+G GF +
Sbjct: 79 HTIVIEDNGTGMTEEEL--ILNLGTVARSGTLGFLQALKEQQKELDGNLIGQFGVGFYSV 136
Query: 215 TMRLGADVIVFSRCQGTD 232
M + +V V +R G D
Sbjct: 137 FM-VTDEVTVETRSSGAD 153
>sp|P46208|HTPG_BACSU Chaperone protein HtpG OS=Bacillus subtilis (strain 168) GN=htpG
PE=3 SV=1
Length = 626
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 172 LLVEDNGGGMTPDKMRQCM-------SLGYSAKSKLA---NTIGQYGNGFKTSTMRLGAD 221
L + D G GMT D++ Q + SL + +++L + IGQ+G GF + M AD
Sbjct: 73 LTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGVGFYAAFMV--AD 130
Query: 222 VI-VFSRCQGTDGKCSTQSIGMLSYTF 247
V+ V S+ G++ +S G YT
Sbjct: 131 VVTVISKALGSEEAYKWESAGADGYTI 157
>sp|A8HVS4|HTPG_AZOC5 Chaperone protein HtpG OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=htpG PE=3 SV=1
Length = 635
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 172 LLVEDNGGGMTPDKMRQCMS-------------LGYSAKSKLANTIGQYGNGFKTSTMRL 218
L VEDNG GM+ D+M + + + +A + A IGQ+G GF ++ M +
Sbjct: 81 LTVEDNGIGMSRDEMVEALGTIARSGTKAFMERIEAAAGGEKAELIGQFGVGFYSAFM-V 139
Query: 219 GADVIVFSRCQGTDGKCSTQSIGMLSYT 246
V V SR G D S G +YT
Sbjct: 140 AEKVDVISRRAGADTANIWSSDGKGAYT 167
>sp|Q5FS51|HTPG_GLUOX Chaperone protein HtpG OS=Gluconobacter oxydans (strain 621H)
GN=htpG PE=3 SV=1
Length = 623
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 139 FAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKS 198
F L D++L N + + D + + L + D+G GMT D++ Q +LG A+S
Sbjct: 54 FEALTDSALALPENASIRINPDKSQKE------LTISDDGVGMTHDELAQ--NLGTIARS 105
Query: 199 -------KL--------ANTIGQYGNGFKTSTMRLGADVIVFSRCQGTDGKCSTQSIGML 243
KL + IGQ+G GF + M + V V SR G+D + S G
Sbjct: 106 GTRAFGEKLNAAKPEDRPSLIGQFGVGFYAAFM-VADRVDVTSRKAGSDEAWTWSSDGKG 164
Query: 244 SYTFL---RGTGKEDIVVPMVD 262
++T R T DIV+ M D
Sbjct: 165 AFTLTPASRSTPGTDIVLHMKD 186
>sp|A6NHR9|SMHD1_HUMAN Structural maintenance of chromosomes flexible hinge
domain-containing protein 1 OS=Homo sapiens GN=SMCHD1
PE=1 SV=2
Length = 2005
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 138 AFAELLDNSLDEVCN--GATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKM 186
A AEL+DNSL G +Q+ LL ++T G + V DNG GMT ++
Sbjct: 144 ALAELIDNSLSATSRNIGVRRIQIKLLFDETQGKPAVAVIDNGRGMTSKQL 194
>sp|A1KUP6|MUTL_NEIMF DNA mismatch repair protein MutL OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=mutL PE=3 SV=1
Length = 658
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 138 AFAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAK 197
A E+++NS+D GAT + V+L G ++ V DNGGG+ PD + + ++K
Sbjct: 27 ALKEIVENSIDA---GATAIDVELAGG---GIRLIRVSDNGGGIHPDDIELALHRHATSK 80
Query: 198 SKLANTIGQYGN-GFK 212
K N + + GF+
Sbjct: 81 IKTLNDLEHVASMGFR 96
>sp|B4RLX4|MUTL_NEIG2 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=mutL PE=3 SV=1
Length = 658
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 138 AFAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAK 197
A E+++NS+D GAT V V+L + G ++ V DNGGG+ PD + + ++K
Sbjct: 27 ALKEIVENSIDA---GATAVDVEL---EGGGIRLIRVGDNGGGIHPDDIELALHRHATSK 80
Query: 198 SKLANTIGQYGN-GFK 212
K N + + GF+
Sbjct: 81 IKTLNDLEHVASMGFR 96
>sp|Q5F8M6|MUTL_NEIG1 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090) GN=mutL PE=1 SV=1
Length = 658
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 138 AFAELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAK 197
A E+++NS+D GAT V V+L + G ++ V DNGGG+ PD + + ++K
Sbjct: 27 ALKEIVENSIDA---GATAVDVEL---EGGGIRLIRVGDNGGGIHPDDIELALHRHATSK 80
Query: 198 SKLANTIGQYGN-GFK 212
K N + + GF+
Sbjct: 81 IKTLNDLEHVASMGFR 96
>sp|Q3IDU0|MUTL_PSEHT DNA mismatch repair protein MutL OS=Pseudoalteromonas haloplanktis
(strain TAC 125) GN=mutL PE=3 SV=1
Length = 618
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++NSLD GAT +Q+D+ + G ++ + DNG G+ D++ ++L A SKL
Sbjct: 29 ELVENSLDA---GATRIQIDIERG---GHKLIRIRDNGAGIAQDEL--TLALSRHATSKL 80
>sp|Q86L04|TRAP1_DICDI TNF receptor-associated protein 1 homolog, mitochondrial
OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1
Length = 711
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 172 LLVEDNGGGMTPDKMRQCM-SLGYSAKSKL----------ANTIGQYGNGFKTSTMRLGA 220
L+++D+G GMT D+M + + +GYS S A+ IGQ+G GF + M +G
Sbjct: 171 LIIQDSGIGMTKDEMIKNLGKIGYSGSSDFIKKLGENPDKASIIGQFGVGFYSCFM-VGH 229
Query: 221 DVIVFSRCQGTDGKCST-QSIGMLSYTFLRGTG 252
+ ++++ K +S G SY+ G
Sbjct: 230 TIKIYTKSATPGSKGYLWESDGTGSYSITEAEG 262
>sp|A8FX83|HTPG_SHESH Chaperone protein HtpG OS=Shewanella sediminis (strain HAW-EB3)
GN=htpG PE=3 SV=1
Length = 638
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 148 DEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLAN----- 202
D + G ++V + NK GT + +EDNG GMT D + + LG AKS A+
Sbjct: 54 DALYEGDGELRVRISTNKEKGT--VTIEDNGIGMTRDTVIE--HLGTIAKSGTADFFKNL 109
Query: 203 ---------TIGQYGNGFKTSTMRLGADVIVFSRC--QGTDGKCSTQSIGMLSY---TFL 248
IGQ+G GF +S + + V V +R G+D +S G + T +
Sbjct: 110 SGDESKDSQLIGQFGVGFYSSFI-VADKVTVRTRAAGHGSDEGVQWESAGEGDFTVDTIV 168
Query: 249 RGTGKEDIVVPMVDYEK 265
+ T +IV+ + + EK
Sbjct: 169 KETRGTEIVLHLREEEK 185
>sp|A4YHK7|TOP6B_METS5 Type 2 DNA topoisomerase 6 subunit B OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=top6B PE=3 SV=1
Length = 531
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 138 AFAELLDNSLDEVCNGATYVQVDLLKNKTDG---THMLLVEDNGGGMTPDKMRQCMS-LG 193
A EL++N+LD + ++ +T + L VEDNG G+ P + +
Sbjct: 35 ALRELVENALDATDVHEILPSIKVIIERTSQEKEIYRLTVEDNGIGIPPHVVPDAFGRVL 94
Query: 194 YSAKSKLANTIGQYGNGFKTSTM 216
YS+K L T G YG G K + +
Sbjct: 95 YSSKYVLRQTRGMYGLGVKAAVL 117
>sp|O83325|MUTL_TREPA DNA mismatch repair protein MutL OS=Treponema pallidum (strain
Nichols) GN=mutL PE=3 SV=2
Length = 620
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
ELL+N+LD GAT + +++ G ++ V DNG GM+P + C ++K
Sbjct: 35 ELLENALDA---GATKIHLEI---NAGGCALIRVSDNGHGMSPQDLLLCAEAHTTSKISS 88
Query: 201 ANTIGQYGN-GFKTSTMRLGADVIVFSRCQGTDGK 234
A+ + Q GF+ + A + SR T +
Sbjct: 89 ADDLLQLRTLGFRGEAL---ASIAAVSRLHLTSTR 120
>sp|B1YG43|HTPG_EXIS2 Chaperone protein HtpG OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1
Length = 621
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 169 THMLLVEDNGGGMTPDKMRQCM-------SLGYSAKSKLA---NTIGQYGNGFKTSTMRL 218
T L++ D G GMT D++ + + SL + A+++ + IGQ+G GF ++ M +
Sbjct: 70 TRQLILRDTGIGMTKDELEENLGTIAKSGSLAFKAENESKDGHDIIGQFGVGFYSAFM-V 128
Query: 219 GADVIVFSRCQGTDGKCSTQSIGMLSYTF 247
V V ++ G+D +S G+ YT
Sbjct: 129 ADTVTVVTKPFGSDVAYKWESHGVDGYTI 157
>sp|P0A0K9|PARE_STAAW DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain MW2)
GN=parE PE=3 SV=1
Length = 663
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P0C1S7|PARE_STAAU DNA topoisomerase 4 subunit B OS=Staphylococcus aureus GN=parE PE=3
SV=1
Length = 663
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P66939|PARE_STAAN DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
N315) GN=parE PE=1 SV=1
Length = 663
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P66938|PARE_STAAM DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=parE PE=3 SV=1
Length = 663
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q5HG65|PARE_STAAC DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain COL)
GN=parE PE=3 SV=2
Length = 663
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q2FYS5|PARE_STAA8 DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain NCTC
8325) GN=parE PE=3 SV=1
Length = 663
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q6GH51|PARE_STAAR DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MRSA252) GN=parE PE=3 SV=2
Length = 663
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q6G9K5|PARE_STAAS DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MSSA476) GN=parE PE=3 SV=2
Length = 663
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 9/120 (7%)
Query: 107 DSLSNSVGMDHLRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVQVDLLKNKT 166
DS+ G++ +R P ++ +T + E++DNS+DEV NG ++D+ NK
Sbjct: 10 DSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGN-EIDVTINK- 66
Query: 167 DGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKLANTIGQYGN-GFKTS--TMRLGADVI 223
DG+ + +EDNG GM P + + + + G++G G+KTS +GA V+
Sbjct: 67 DGS--ISIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q662F3|MUTL_BORGA DNA mismatch repair protein MutL OS=Borrelia garinii (strain PBi)
GN=mutL PE=3 SV=1
Length = 611
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQC 189
ELLDNS+D +GAT ++V L + G H +L+ DNG G+ + ++ C
Sbjct: 30 ELLDNSID---SGATKIEVFL---EEGGIHKILIIDNGIGIGKEDLKIC 72
>sp|A7MMA2|MUTL_CROS8 DNA mismatch repair protein MutL OS=Cronobacter sakazakii (strain
ATCC BAA-894) GN=mutL PE=3 SV=1
Length = 635
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++NSLD GAT + +D+ + G ++ + DNG G+ D++ ++L A SK+
Sbjct: 29 ELVENSLDA---GATRIDIDIERG---GAKLIRIRDNGAGIKKDEL--ALALARHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|B1ZZY2|MUTL_OPITP DNA mismatch repair protein MutL OS=Opitutus terrae (strain DSM
11246 / PB90-1) GN=mutL PE=3 SV=1
Length = 628
Score = 36.6 bits (83), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 13/73 (17%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++N+LD GAT ++V+ + G ++ VEDNG GM+ D ++L A SK+
Sbjct: 30 ELVENALDA---GATRIEVEF---RHGGRSLMRVEDNGSGMSRDD--ALLALERHATSKI 81
Query: 201 A-----NTIGQYG 208
+ + +G YG
Sbjct: 82 SEAADLDRLGSYG 94
>sp|B5Y334|MUTL_KLEP3 DNA mismatch repair protein MutL OS=Klebsiella pneumoniae (strain
342) GN=mutL PE=3 SV=1
Length = 619
Score = 36.2 bits (82), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++NSLD GAT + +D+ + G ++ + DNG G+ D++ ++L A SK+
Sbjct: 29 ELVENSLDA---GATRIDIDIERG---GAKLIRIRDNGSGIKKDEL--ALALARHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|A6TH85|MUTL_KLEP7 DNA mismatch repair protein MutL OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=mutL PE=3
SV=1
Length = 619
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++NSLD GAT + +D+ + G ++ + DNG G+ D++ ++L A SK+
Sbjct: 29 ELVENSLDA---GATRIDIDIERG---GAKLIRIRDNGSGIKKDEL--ALALARHATSKI 80
Query: 201 AN 202
A+
Sbjct: 81 AS 82
>sp|Q7MH01|MUTL_VIBVY DNA mismatch repair protein MutL OS=Vibrio vulnificus (strain
YJ016) GN=mutL PE=3 SV=1
Length = 664
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++NSLD +GAT + +D+ K G ++ + DNG G+ D++ ++L A SK+
Sbjct: 29 ELVENSLD---SGATKIDIDIEKG---GAKLIRIRDNGSGIVKDEL--GLALSRHATSKI 80
>sp|Q07XW5|MUTL_SHEFN DNA mismatch repair protein MutL OS=Shewanella frigidimarina
(strain NCIMB 400) GN=mutL PE=3 SV=1
Length = 619
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 141 ELLDNSLDEVCNGATYVQVDLLKNKTDGTHMLLVEDNGGGMTPDKMRQCMSLGYSAKSKL 200
EL++NSLD GAT V +D+ K G+ ++ + DNG G+ D++ ++L A SK+
Sbjct: 29 ELVENSLDA---GATRVDIDIDKG---GSKLIRIRDNGAGIAKDEL--ALALSRHATSKV 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 260,456,248
Number of Sequences: 539616
Number of extensions: 11743331
Number of successful extensions: 36287
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 36123
Number of HSP's gapped (non-prelim): 264
length of query: 662
length of database: 191,569,459
effective HSP length: 124
effective length of query: 538
effective length of database: 124,657,075
effective search space: 67065506350
effective search space used: 67065506350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)