Query 045478
Match_columns 852
No_of_seqs 540 out of 3587
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:39:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045478.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045478hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 100.0 2.9E-36 1E-40 350.8 18.7 387 239-744 65-476 (506)
2 3hsi_A Phosphatidylserine synt 100.0 5E-34 1.7E-38 325.1 17.7 345 203-742 21-401 (458)
3 1xdp_A Polyphosphate kinase; P 99.9 1.2E-21 4.2E-26 230.9 20.4 140 239-457 346-494 (687)
4 2o8r_A Polyphosphate kinase; s 99.9 2.5E-20 8.5E-25 217.9 24.5 267 239-744 351-639 (705)
5 2fk9_A Protein kinase C, ETA t 99.8 8.2E-20 2.8E-24 177.9 13.8 127 23-178 25-156 (157)
6 2ep6_A MCTP2 protein; beta san 99.8 2.4E-18 8.3E-23 163.4 15.8 123 23-179 9-132 (133)
7 2dmh_A Myoferlin; beta-sandwic 99.8 4.7E-18 1.6E-22 162.8 15.3 124 25-182 5-136 (140)
8 1gmi_A Protein kinase C, epsil 99.8 4.4E-18 1.5E-22 162.3 14.4 129 24-180 3-134 (136)
9 3b7y_A E3 ubiquitin-protein li 99.8 8.6E-18 3E-22 163.5 15.6 124 25-179 18-153 (153)
10 1wfj_A Putative elicitor-respo 99.8 3.2E-18 1.1E-22 163.1 12.2 123 25-182 8-133 (136)
11 3kwu_A MUNC13-1; calcium bindi 99.7 3E-17 1E-21 158.7 17.8 119 26-178 16-146 (148)
12 3m7f_B E3 ubiquitin-protein li 99.7 4.4E-17 1.5E-21 162.5 15.8 124 26-180 7-142 (176)
13 1rlw_A Phospholipase A2, CALB 99.7 3.4E-17 1.2E-21 153.7 12.2 118 26-179 2-125 (126)
14 2nq3_A Itchy homolog E3 ubiqui 99.7 9.2E-17 3.2E-21 159.5 13.7 130 20-182 29-164 (173)
15 4ggj_A Mitochondrial cardiolip 99.7 5.7E-17 1.9E-21 164.4 11.2 134 239-459 45-179 (196)
16 3pyc_A E3 ubiquitin-protein li 99.7 3.4E-16 1.2E-20 148.2 15.3 121 26-177 4-131 (132)
17 1a25_A CALB, protein kinase C 99.6 9.5E-16 3.2E-20 148.4 12.6 106 24-160 28-140 (149)
18 2b3r_A Phosphatidylinositol-4- 99.6 2.1E-15 7.1E-20 143.4 13.1 105 24-159 17-130 (134)
19 1rsy_A Synaptotagmin I; calciu 99.6 1.6E-15 5.5E-20 147.3 11.8 105 25-159 40-150 (152)
20 3f04_A Synaptotagmin-1; C2A, c 99.6 1.7E-15 5.9E-20 145.4 11.1 104 25-158 32-141 (143)
21 1w15_A Synaptotagmin IV; metal 99.6 1.6E-15 5.5E-20 147.5 10.2 108 25-164 28-143 (153)
22 2d8k_A Synaptotagmin VII; exoc 99.6 3.3E-15 1.1E-19 143.1 12.2 105 25-159 24-135 (141)
23 1byr_A Protein (endonuclease); 99.6 5.4E-15 1.9E-19 143.8 13.5 135 239-458 13-149 (155)
24 3rdl_A Protein kinase C alpha 99.6 3E-15 1E-19 142.4 11.2 105 25-160 14-125 (137)
25 2q3x_A Regulating synaptic mem 99.6 2.4E-15 8.3E-20 149.1 10.9 106 25-160 28-140 (171)
26 3fdw_A Synaptotagmin-like prot 99.6 2E-15 6.8E-20 146.0 9.5 107 26-162 22-137 (148)
27 2r83_A Synaptotagmin-1; C2A-C2 99.6 9.9E-15 3.4E-19 156.7 15.9 126 25-180 17-148 (284)
28 1wfm_A Synaptotagmin XIII; C2 99.6 1E-14 3.5E-19 139.2 13.7 102 26-160 25-133 (138)
29 2z0u_A WW domain-containing pr 99.6 1.7E-15 5.9E-20 147.6 8.3 103 26-158 42-154 (155)
30 1rh8_A Piccolo protein; beta-s 99.6 6.8E-16 2.3E-20 148.0 5.3 106 24-159 15-138 (142)
31 2bwq_A Regulating synaptic mem 99.6 6.1E-15 2.1E-19 138.8 11.3 101 26-157 17-128 (129)
32 2chd_A Rabphilin-3A, exophilin 99.6 3.9E-15 1.3E-19 142.7 10.1 104 25-158 27-139 (142)
33 2dmg_A KIAA1228 protein; beta- 99.6 7E-15 2.4E-19 141.0 10.7 105 26-161 23-137 (142)
34 1v27_A Regulating synaptic mem 99.6 4.4E-15 1.5E-19 142.0 8.9 106 26-162 20-136 (141)
35 3fbk_A RGS3, RGP3, regulator o 99.6 1.3E-14 4.4E-19 141.1 12.2 107 24-161 24-139 (153)
36 3n5a_A Synaptotagmin-7; calciu 99.6 4.2E-15 1.4E-19 141.6 8.1 107 26-164 15-129 (138)
37 1ugk_A Synaptotagmin IV, KIAA1 99.5 1.8E-14 6E-19 137.5 11.4 104 25-158 20-132 (138)
38 4gel_A Mitochondrial cardiolip 99.5 4.2E-15 1.4E-19 153.6 7.5 154 236-459 54-211 (220)
39 2enp_A B/K protein; C2 type 1, 99.5 7.9E-15 2.7E-19 141.5 8.2 109 26-158 25-140 (147)
40 2cm5_A Rabphilin-3A; protein t 99.5 3.5E-14 1.2E-18 140.0 13.0 106 26-163 36-149 (166)
41 1tjx_A Similar to synaptotagmi 99.5 3.2E-14 1.1E-18 139.1 12.6 104 25-158 23-146 (159)
42 1byr_A Protein (endonuclease); 99.5 1.2E-13 4.1E-18 134.3 11.6 118 545-741 13-130 (155)
43 1dqv_A Synaptotagmin III; beta 99.5 3.3E-13 1.1E-17 145.9 14.1 124 25-179 18-149 (296)
44 3l9b_A Otoferlin; C2-domain, b 99.5 2.7E-13 9.3E-18 126.9 11.3 116 28-181 22-142 (144)
45 2cjt_A UNC-13 homolog A, MUNC1 99.4 7.5E-13 2.6E-17 125.1 14.0 86 26-148 4-91 (131)
46 4ggj_A Mitochondrial cardiolip 99.4 8.5E-14 2.9E-18 141.0 7.9 119 545-744 45-163 (196)
47 3bxj_A RAS GTPase-activating p 99.4 2.5E-14 8.6E-19 164.7 1.3 126 24-184 8-162 (483)
48 3jzy_A Intersectin 2; C2 domai 99.4 1.2E-12 4.1E-17 152.3 14.2 115 26-177 386-506 (510)
49 1djx_A PLC-D1, phosphoinositid 99.4 1.4E-12 4.7E-17 154.1 14.1 120 25-178 495-623 (624)
50 3nsj_A Perforin-1; pore formin 99.4 2.5E-12 8.5E-17 148.7 13.8 108 26-178 393-503 (540)
51 2cjs_A UNC-13 homolog A, MUNC1 99.4 3.2E-12 1.1E-16 125.9 12.5 85 26-147 13-99 (167)
52 2r83_A Synaptotagmin-1; C2A-C2 99.3 1E-11 3.6E-16 133.0 12.9 90 26-145 149-246 (284)
53 1cjy_A CPLA2, protein (cytosol 99.3 5.1E-12 1.7E-16 150.4 11.0 104 25-158 16-125 (749)
54 1dqv_A Synaptotagmin III; beta 99.2 3.8E-12 1.3E-16 137.5 5.4 108 26-164 151-266 (296)
55 4gel_A Mitochondrial cardiolip 99.1 1.7E-10 5.7E-15 118.9 9.3 138 545-743 57-194 (220)
56 1xdp_A Polyphosphate kinase; P 99.0 6E-10 2.1E-14 131.6 10.2 118 549-743 350-479 (687)
57 2enj_A NPKC-theta, protein kin 99.0 5.2E-09 1.8E-13 96.3 13.4 90 78-179 32-130 (138)
58 3pfq_A PKC-B, PKC-beta, protei 99.0 1.1E-09 3.6E-14 131.7 11.3 106 25-161 170-282 (674)
59 1yrk_A NPKC-delta, protein kin 99.0 7.2E-09 2.5E-13 94.2 13.5 89 78-178 27-124 (126)
60 3qr0_A Phospholipase C-beta (P 98.9 3.4E-09 1.1E-13 127.5 12.3 115 25-180 648-772 (816)
61 2zkm_X 1-phosphatidylinositol- 98.9 3E-09 1E-13 128.7 11.3 113 25-178 676-798 (799)
62 3ohm_B 1-phosphatidylinositol- 98.9 2.4E-09 8.1E-14 129.5 10.3 114 26-180 724-846 (885)
63 3hsi_A Phosphatidylserine synt 98.8 1.2E-08 4.3E-13 116.0 10.3 148 239-458 257-420 (458)
64 1v0w_A Phospholipase D; hydrol 98.6 1E-07 3.6E-12 110.4 10.1 159 240-458 314-492 (506)
65 2o8r_A Polyphosphate kinase; s 98.0 8.3E-06 2.8E-10 95.9 9.7 119 548-743 354-486 (705)
66 3qph_A TRMB, A global transcri 96.1 0.0091 3.1E-07 65.0 8.1 48 239-303 118-165 (342)
67 3qph_A TRMB, A global transcri 95.2 0.017 5.7E-07 63.0 5.5 52 544-615 117-168 (342)
68 2f5t_X Archaeal transcriptiona 95.0 0.035 1.2E-06 56.8 6.8 50 239-305 9-58 (233)
69 2c1l_A Restriction endonucleas 81.9 5.3 0.00018 40.2 9.1 39 701-741 103-144 (358)
70 2yrb_A Protein fantom; beta sa 64.9 25 0.00087 33.1 8.8 99 78-178 40-149 (156)
71 3l4c_A Dedicator of cytokinesi 62.8 14 0.00049 36.8 7.0 39 90-128 77-118 (220)
72 2wxf_A Phosphatidylinositol-4, 61.9 42 0.0015 40.9 12.3 71 24-127 214-293 (940)
73 3hhm_A Phosphatidylinositol-4, 45.6 1.1E+02 0.0036 37.9 12.0 90 24-145 352-455 (1091)
74 2f5t_X Archaeal transcriptiona 43.3 39 0.0013 34.1 6.6 50 545-614 9-58 (233)
75 1e7u_A Phosphatidylinositol 3- 34.8 1.6E+02 0.0056 35.9 11.3 50 78-127 238-295 (961)
76 1q32_A TDP1P;, tyrosyl-DNA pho 33.4 15 0.00053 41.8 1.9 33 361-397 178-210 (544)
77 1jx7_A Hypothetical protein YC 27.3 1.1E+02 0.0036 26.4 6.2 66 233-303 10-79 (117)
78 2y3a_A Phosphatidylinositol-4, 25.7 68 0.0023 39.8 5.9 71 24-127 350-429 (1092)
79 2c1l_A Restriction endonucleas 25.5 1.4E+02 0.0047 30.2 6.9 80 281-393 49-128 (358)
80 2l82_A Designed protein OR32; 24.1 81 0.0028 27.3 4.4 45 283-341 90-134 (162)
81 2hy5_A Putative sulfurtransfer 22.5 1.8E+02 0.006 25.9 6.8 70 231-303 7-79 (130)
82 1jy1_A TDP1, tyrosyl-DNA phosp 20.8 44 0.0015 37.3 2.7 43 695-738 341-399 (464)
83 3ech_C 25-MER fragment of prot 20.5 71 0.0024 19.5 2.2 19 782-800 3-22 (25)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=100.00 E-value=2.9e-36 Score=350.85 Aligned_cols=387 Identities=16% Similarity=0.124 Sum_probs=205.0
Q ss_pred hhhHHHHHHHHHhccceEEEEEeec-ccceeEecCCCCCCCCCCcchHHHHHHHhhhcC--CeEEEEEeCCCcccccccc
Q 045478 239 GQCWEEICHAVLEARHLIYIIGWSV-FHPVKLVREPTKPLPSFGELSFGELLKHKSQEG--VRVLLLIWDDKTSHDNLFI 315 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~~I~I~~w~~-~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~G--V~VriLvwD~~~s~~~~~~ 315 (852)
+++|++|+++|++||++|+|++|++ .++ ..+.+|.++|++||+|| |+||||+ |..|+......
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~d-------------~~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~~~ 130 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAPFPNG-------------AFQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMNVI 130 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESSCCCH-------------HHHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCCCH
T ss_pred HHHHHHHHHHHHHhccEEEEEEeeccCCC-------------hHHHHHHHHHHHHHhCCCCcEEEEEE-eCccccccccC
Confidence 6789999999999999999999984 432 23579999999999999 9999997 77544321000
Q ss_pred cccccccCCcHHHHhhhcCCCCEEEecCCCCCCcchhhhhccccccccCccceEEecCCCCCCCCceEEEEcccCCCCCc
Q 045478 316 KTEGVMQTHDEETRKFFKHSSVNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTPASGNNRKISAFIGGLDLCDGR 395 (852)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl~~~r 395 (852)
.....+.|+..|+++... .+.....+.. ....+.+||+|++|||++ +||+||+||+.++
T Consensus 131 ---------~~~~~~~L~~~g~~~~~~--~~~~~~~~~~--~~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~ 189 (506)
T 1v0w_A 131 ---------PSKYRDELTAKLGKAAEN--ITLNVASMTT--SKTAFSWNHSKILVVDGQ--------SALTGGINSWKDD 189 (506)
T ss_dssp ---------HHHHHHHHHHHHGGGGGG--EEEEEEEECS--BTTTTBCBCCCEEEETTT--------EEEEESCCCCHHH
T ss_pred ---------CHHHHHHHHhcccceeec--Cccccccccc--cCCccccceeeEEEECCc--------EEEeeccccCccc
Confidence 134455555544432100 0000000000 001124999999999998 9999999998667
Q ss_pred cCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeChHHHHHHHHHHHHHhhhhhhhhhhhcccccccccc
Q 045478 396 YDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGPAAYDILINFEQRWRRSTKWREFRLKKVTHWYDDS 475 (852)
Q Consensus 396 ~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gpaa~dl~~~F~~rW~~~~~~~~~~~~~~~~~~~~~ 475 (852)
|.+. ..+|||++++|+||+|.+++..|.++|+....... .+.. .|....
T Consensus 190 y~~~----------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~-~~~~--~~~~~~ 238 (506)
T 1v0w_A 190 YLDT----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKS-NIAS--VWFAAS 238 (506)
T ss_dssp HTSS----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTT-STTT--EEEEES
T ss_pred cccC----------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhccccC-Chhh--hccccc
Confidence 7531 13799999999999999999999999997654210 0000 000000
Q ss_pred cccccccCCCC-CCCCCCCCCCCCCCCCCCCCce--------eeEEecccCCCCCCCCCChHHHHHhhhhcccC-c----
Q 045478 476 LINLDRIGITP-STGPHSYKPTRAGSEKETENWH--------IQVFRSIDSGSVKGFPKDVEEAVAQNLVCAKD-L---- 541 (852)
Q Consensus 476 ~~~~~~~~~~~-~~~P~~~~~~~~~~~~~~~~~~--------vQv~rs~~~~~~~~~p~~~~~~~~~~l~~~~~-~---- 541 (852)
- ..+..+.+. ...|.. ....+... +|++++.+......+ .+. +...-+++... .
T Consensus 239 ~-~~~~~~~~~~~~~p~~--------~~~~~~~~~~~~~~~~~~i~~~~P~~~~~~~--~w~-~~~~~~~~d~P~~~~~~ 306 (506)
T 1v0w_A 239 G-NAGCMPTMHKDTNPKA--------SPATGNVPVIAVGGLGVGIKDVDPKSTFRPD--LPT-ASDTKCVVGLHDNTNAD 306 (506)
T ss_dssp T-TCCCCTTHHHHHSCSS--------CCCCSSEEEEEEECCCSSSCSCCTTCCCCCC--CCC-CSSSCSSTTCCCTTTSC
T ss_pred c-ccccCchhccccCccc--------CcccccccceecccccceeecCCcccccccc--Ccc-cccceeeccccccccCc
Confidence 0 000000000 000100 00112222 233322111000000 000 00000000000 0
Q ss_pred ---cchhHHHHHHHHHHHhccceEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCC
Q 045478 542 ---KVDKSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEG 618 (852)
Q Consensus 542 ---~~e~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg 618 (852)
..+.++.++|+++|.+||++|||++|||.+... |.. .....+..+|.++. .+||+|+||+|..+..
T Consensus 307 ~~~~~~~~~~~~~~~~I~~A~~~I~I~tq~~~pyf~--p~~-------~~~~~i~~aL~~Aa--~rGV~VrIl~~~~~~~ 375 (506)
T 1v0w_A 307 RDYDTVNPEESALRALVASAKGHIEISQQDLNATCP--PLP-------RYDIRLYDALAAKM--AAGVKVRIVVSDPANR 375 (506)
T ss_dssp HHHHHHCHHHHHHHHHHHTCSSEEEEEESCSSCCTT--TSC-------SCCHHHHHHHHHHH--HTTCEEEEEECCGGGC
T ss_pred ccccccccHHHHHHHHHhCcCcEEEEEecccccccc--Ccc-------cchHHHHHHHHHHH--hCCCcEEEEeCCCCch
Confidence 114679999999999999999999966653110 210 00124556666664 3789999999976421
Q ss_pred CCCchh----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHH
Q 045478 619 NPNSAA----VQEILYWQGQTMSMMYKIVAQALQDNGLSNK-YHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQ 693 (852)
Q Consensus 619 ~~~~~~----~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~-~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (852)
...... ...++.. ...+.. --.|.+.|+... ..+...+.++.++..+.. +|..
T Consensus 376 ~~~~~a~~~~~~~L~~~-~~~l~~-----gv~ll~~g~~e~~~~~~~~l~i~~~~~~~~~--~~~~-------------- 433 (506)
T 1v0w_A 376 GAVGSGGYSQIKSLSEI-SDTLRN-----RLANITGGQQAAKTAMCSNLQLATFRSSPNG--KWAD-------------- 433 (506)
T ss_dssp C------CCCCSCTHHH-HHHHHH-----HHHHHHTSHHHHHHHHHHHEEEEECCSSSSS--SCTT--------------
T ss_pred HHHHHhHHHHHHHHHHh-hhhhcc-----cchhcccccchhccccccceeeeeccccCcc--cccc--------------
Confidence 100000 0000000 000000 011222221000 000001233222211000 1210
Q ss_pred hhcceeEEEEeeEEEEcceeEEecCcCcccCCCCCCCCceeEEEEecCccc
Q 045478 694 KFRRFMIYVHAKGMIVDDEYVIMGSANINQRSLEGSRDTEIAMGAYQPHYT 744 (852)
Q Consensus 694 ~~~~~~iyvHSKlmIVDD~~~iIGSANln~RSm~~n~DsEi~v~i~d~~~~ 744 (852)
+...++|+|+|||||++++|||+|||.||| +|+++.|+|++.+
T Consensus 434 ---~~~~~lHaK~~vvD~~~~~vGS~N~d~rS~-----~E~~l~i~~~~~a 476 (506)
T 1v0w_A 434 ---GHPYAQHHKLVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPEAA 476 (506)
T ss_dssp ---SCCCCBCCEEEEETTTEEEEESCCSSCCCS-----BCEEEEEECHHHH
T ss_pred ---CccccceEEEEEECCcEEEEeCCCCCCcch-----hhceeEecCHHHH
Confidence 113699999999999999999999999999 4999999998543
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=100.00 E-value=5e-34 Score=325.13 Aligned_cols=345 Identities=14% Similarity=0.112 Sum_probs=210.8
Q ss_pred CccccccceeEEeecccCCCCCCCcEEecCCcccchhhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCc
Q 045478 203 YFPLRKEGNLTLYQDAHVPPGMLPEIALDGGKTFRHGQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGE 282 (852)
Q Consensus 203 ~~p~~~g~~v~l~~d~~~~~~~~p~i~l~~g~~y~~~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~ 282 (852)
.||. .||.|+++.+| +++|++++++|++|+++|+|++|+|.++ ..+
T Consensus 21 ~~~~-~~n~v~~l~~g--------------------~~~~~~l~~~I~~A~~~I~i~~~~~~~d-------------~~g 66 (458)
T 3hsi_A 21 FLAL-QAEQIEFLGSS--------------------AEFKTQIIELIRNAKKRIYVTALYWQKD-------------EAG 66 (458)
T ss_dssp BEEC-CGGGEEECCCH--------------------HHHHHHHHHHHHTCSSEEEEEESCBCSS-------------HHH
T ss_pred Cccc-cCCeEEEEeCH--------------------HHHHHHHHHHHHhcCCEEEEEEEEEecC-------------cHH
Confidence 3444 68999999997 7899999999999999999999988652 345
Q ss_pred chHHHHHHHhhhc--CCeEEEEEeCCC-------cccccccccccccccCCcHHHHhhhcCCC--CEEE--ecCCCCCCc
Q 045478 283 LSFGELLKHKSQE--GVRVLLLIWDDK-------TSHDNLFIKTEGVMQTHDEETRKFFKHSS--VNCV--LAPRYASNK 349 (852)
Q Consensus 283 ~~l~~~L~~~a~~--GV~VriLvwD~~-------~s~~~~~~~~~~~~~~~~~~~~~~l~~~g--v~v~--~~~~~~~~~ 349 (852)
..|.++|.+||+| ||+||||+ |+. |+.... ........|.++| |+|. +++ .|..
T Consensus 67 ~~l~~aL~~aa~r~~GV~Vril~-D~~~~~r~~~g~~~~~----------~~~~~~~~L~~~g~nv~v~~~~f~-~p~~- 133 (458)
T 3hsi_A 67 QEILDEIYRVKQENPHLDVKVLI-DWHRAQRNLLGAEKSA----------TNADWYCEQRQTYQLPDDPNMFFG-VPIN- 133 (458)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEE-ETTGGGSCCC-----C----------CHHHHHHHHHHHHTCTTCCCCEEE-ECSS-
T ss_pred HHHHHHHHHHHhcCCCCEEEEEE-ECcccccccccccccc----------ccHHHHHHHHhhCCCceEeeeecC-Cccc-
Confidence 7999999999999 99999997 873 332110 0123444454434 6666 543 1211
Q ss_pred chhhhhccccccccCccceEEecCCCCCCCCceEEEEcccCCCCCccCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCC
Q 045478 350 LSIFKQQVVGTLFTHHQKCVIVDTPASGNNRKISAFIGGLDLCDGRYDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPRE 429 (852)
Q Consensus 350 ~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl~~~r~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~ 429 (852)
....+.++|+|++|||++ + ++||+||++ +|.+.. ....
T Consensus 134 -------~~~~~~r~H~Ki~viD~~--------v-~~~G~Ni~d-~y~~~~-------------------------~~~~ 171 (458)
T 3hsi_A 134 -------TREVFGVLHVKGFVFDDT--------V-LYSGASINN-VYLHQF-------------------------EKYR 171 (458)
T ss_dssp -------SSGGGCCEECCEEEETTE--------E-EEESCCBST-TTTTCS-------------------------SCCE
T ss_pred -------cccccCcceeeEEEECCC--------E-EEEeeecCH-HHhcCC-------------------------cccC
Confidence 112457999999999997 7 556699999 443210 0113
Q ss_pred ceeeceeeeeChHHHHHHHHH--HHHHhhhhhhhhhhhccc-----ccccccc--c-cccccc-CCCCCCCCCCCCCCCC
Q 045478 430 PWHDMHCKVEGPAAYDILINF--EQRWRRSTKWREFRLKKV-----THWYDDS--L-INLDRI-GITPSTGPHSYKPTRA 498 (852)
Q Consensus 430 pWhDv~~~v~Gpaa~dl~~~F--~~rW~~~~~~~~~~~~~~-----~~~~~~~--~-~~~~~~-~~~~~~~P~~~~~~~~ 498 (852)
.|+|+ .+.||.+.|....| ...|+...-.. +... ..|.... + ..+... .+. .|
T Consensus 172 ~drd~--~i~g~~~~D~~~~~~~~~~~~g~~v~~---l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~-------- 235 (458)
T 3hsi_A 172 YDRYQ--KITHAELADSMVNFINDYLLDFSAVYP---LDVTNRPRTKEIRGNIRAYRKDLAQNGEYS---LK-------- 235 (458)
T ss_dssp ECCEE--EEECHHHHHHHHHHHHHTTCCTTTCEE---SSSSCCCCGGGTHHHHHHHHHHHHHHCCCC---CS--------
T ss_pred cchhh--hhcCchHHHHHHHHHHhhhhcCccchh---hHHHhcccchhhHHHHHHHHHhhhhccccc---cc--------
Confidence 57774 48999999999888 44565332111 0000 0000000 0 000000 000 00
Q ss_pred CCCCCCCCceeeEEecccCCCCCCCCCChHHHHHhhhhcccCccchhHHHHHHHHHHHhccceEEEeecccccCCCCCCc
Q 045478 499 GSEKETENWHIQVFRSIDSGSVKGFPKDVEEAVAQNLVCAKDLKVDKSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPS 578 (852)
Q Consensus 499 ~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~~~~~~~l~~~~~~~~e~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~ 578 (852)
....+...+|+.... +++. .+..+..+|+++|.+|+++|||+++||++.
T Consensus 236 --~~~~~~~~~~v~p~~----------------------~~~~-~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~------ 284 (458)
T 3hsi_A 236 --SAVKLPNVLSVSPLF----------------------GLGA-SGNELNQVIEDLFLQVQKKLVICTPYFNFP------ 284 (458)
T ss_dssp --SCBSSCSSCEEEEEE----------------------EESS-SSCHHHHHHHHHHHTCSSEEEEECSSSCCC------
T ss_pred --ccCCCCceEEEecCC----------------------CCCC-chhHHHHHHHHHHHhcccEEEEEEeccCCC------
Confidence 000111223443211 1111 136789999999999999999999999942
Q ss_pred cccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCC----CCchhHHHHHHHHHHHH--H---HHHHHHHHHHHH
Q 045478 579 YKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEGN----PNSAAVQEILYWQGQTM--S---MMYKIVAQALQD 649 (852)
Q Consensus 579 ~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg~----~~~~~~~~~~~~~~~t~--~---~~~~~i~~~L~~ 649 (852)
..+..+|..+ +.+||+|+||+|.....+ ++...+ .+....+ . ..+..-++.|.+
T Consensus 285 -----------~~~~~aL~~A--a~rGV~VrIi~~~~~and~y~~~~~~~~----~~~~~~~lye~~~~~f~~~~~~l~~ 347 (458)
T 3hsi_A 285 -----------RTLQHKIATL--LENGKRVEIIVGDKVANDFYIPPEQPFK----MAGALPYLYESNLRRFCEKFETQIE 347 (458)
T ss_dssp -----------HHHHHHHHHH--HTTTCEEEEEEECGGGSTTCCCTTSCCC----GGGGHHHHHHHHHHHHHHHTHHHHH
T ss_pred -----------HHHHHHHHHH--HHCCCeEEEEECCccccCCccCCcchhh----hhcchHHHHHHhhhhhHHHHHHHHh
Confidence 2344555555 358899999999753111 121100 1111110 0 000011345677
Q ss_pred CC---CCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhcceeEEEEeeEEEEcceeEEecCcCcccCCC
Q 045478 650 NG---LSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFMIYVHAKGMIVDDEYVIMGSANINQRSL 726 (852)
Q Consensus 650 ~G---v~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyvHSKlmIVDD~~~iIGSANln~RSm 726 (852)
+| +++ |. |. ..++|+|+|||||++++|||+|||.||+
T Consensus 348 ~G~i~V~i----------~~----------~~--------------------~~~lHaK~~vvD~~~~~vGS~N~d~RS~ 387 (458)
T 3hsi_A 348 SGQLVVRL----------WR----------DG--------------------DNTYHLKGVWVDDRYILLTGNNLNPRAW 387 (458)
T ss_dssp HTSEEEEE----------EC----------BT--------------------TBEECCCEEEETTTEEEEECCCCSHHHH
T ss_pred CCCeEEEE----------Ee----------cC--------------------CCceeEEEEEECCeEEEecCCCCCcchh
Confidence 77 432 21 22 2599999999999999999999999999
Q ss_pred CCCCCceeEEEEecCc
Q 045478 727 EGSRDTEIAMGAYQPH 742 (852)
Q Consensus 727 ~~n~DsEi~v~i~d~~ 742 (852)
..| +|+++.|+|++
T Consensus 388 ~lN--~E~~~~i~~~~ 401 (458)
T 3hsi_A 388 RLD--AENGLLIYDPQ 401 (458)
T ss_dssp HTC--EEEEEEEECTT
T ss_pred hhC--ceeEEEEeCCc
Confidence 855 99999999985
No 3
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.87 E-value=1.2e-21 Score=230.94 Aligned_cols=140 Identities=14% Similarity=0.176 Sum_probs=106.2
Q ss_pred hhhHHHHHHHHHhccc-----eEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCcccccc
Q 045478 239 GQCWEEICHAVLEARH-----LIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNL 313 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~-----~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~ 313 (852)
.+.|+.+++.|++|++ +|+|+.|.+.+ +..+.++|++||++||+|+||+ |..+....
T Consensus 346 ~~sf~~v~~~I~~A~~dp~v~~I~it~Y~~~~----------------d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~- 407 (687)
T 1xdp_A 346 YHTFEHVLELLRQASFDPSVLAIKINIYRVAK----------------DSRIIDSMIHAAHNGKKVTVVV-ELQARFDE- 407 (687)
T ss_dssp TBCTHHHHHHHHHHHHCTTEEEEEEEESSCCT----------------TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTT-
T ss_pred hhhhhhHHHHHHHHhhCCcceEEEEEeeeecC----------------cHHHHHHHHHHHhcCCEEEEEE-CCCcccch-
Confidence 4568999999999997 99998887643 2599999999999999999997 87652210
Q ss_pred cccccccccCCcHHHHhhhcCCCCEEEecCCCCCCcchhhhhccccccccCccceEEecCCCCCCCCceE---EEEcccC
Q 045478 314 FIKTEGVMQTHDEETRKFFKHSSVNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTPASGNNRKIS---AFIGGLD 390 (852)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~v---AfvGG~n 390 (852)
.......+.|..+||+++.+. + .+++|+|++|||++..| .+ +|+||.|
T Consensus 408 ---------~~n~~~~~~L~~aGV~V~~~~--~--------------~~k~H~Ki~VID~re~~----~i~~~a~iGS~N 458 (687)
T 1xdp_A 408 ---------EANIHWAKRLTEAGVHVIFSA--P--------------GLKIHAKLFLISRKENG----EVVRYAHIGTGN 458 (687)
T ss_dssp ---------TTTTTTTHHHHHHTCEEEECC--T--------------TCEECCEEEEEEEEETT----EEEEEEEEESSC
T ss_pred ---------hhHHHHHHHHHHCCCEEEEec--C--------------CccccceEEEEEeccCC----eEEEEEEEeCCc
Confidence 001234566788999997542 1 24689999999942000 15 9999999
Q ss_pred CCCCccCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeCh-HHHHHHHHHHHHHhhh
Q 045478 391 LCDGRYDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGP-AAYDILINFEQRWRRS 457 (852)
Q Consensus 391 l~~~r~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gp-aa~dl~~~F~~rW~~~ 457 (852)
+.. |.. ..|+|+++.++|| +|.++...|...|...
T Consensus 459 ~d~-rs~-------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s 494 (687)
T 1xdp_A 459 FNE-KTA-------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPY 494 (687)
T ss_dssp SCT-TGG-------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTT
T ss_pred CCc-chh-------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhc
Confidence 877 310 2589999999987 6899999999999853
No 4
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.85 E-value=2.5e-20 Score=217.93 Aligned_cols=267 Identities=13% Similarity=0.174 Sum_probs=177.8
Q ss_pred hhhHHHHHHHHHhccc-----eEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCcccccc
Q 045478 239 GQCWEEICHAVLEARH-----LIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNL 313 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~-----~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~ 313 (852)
.+.|+.++++|++|++ +|.++.|++.. +..|.++|++||++||+|++|+ | .++....
T Consensus 351 ~~sf~~vi~~I~~A~~DP~V~sIk~tlYr~~~----------------ds~Iv~ALi~AA~rGv~V~vLv-e-l~arfde 412 (705)
T 2o8r_A 351 YYTYDYVVRLLMEAAISPDVSEIRLTQYRVAE----------------NSSIISALEAAAQSGKKVSVFV-E-LKARFDE 412 (705)
T ss_dssp TBCSHHHHHHHHHHHTCTTEEEEEEEESCCCS----------------CCHHHHHHHHHHHTTCEEEEEE-C-CCSCC--
T ss_pred hHhHHHHHHHHHHhccCCCceEEEEEEEEEcC----------------CHHHHHHHHHHHHCCCEEEEEE-e-CCCCcch
Confidence 5679999999999999 99999998643 2699999999999999999997 8 5543210
Q ss_pred cccccccccCCcHHHHhhhcCCCCEEEecCCCCCCcchhhhhccccccccCccceEEecCC--CCCCCCceEEEEcccCC
Q 045478 314 FIKTEGVMQTHDEETRKFFKHSSVNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTP--ASGNNRKISAFIGGLDL 391 (852)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~--~~~~~~~~vAfvGG~nl 391 (852)
..+....+.|+.+||+|... . ..+++|+|++|||++ ..|.-+ ..+++|.-|+
T Consensus 413 ---------e~ni~wa~~Le~aGv~Vv~g--~--------------~~lk~H~Ki~lIdrr~~~~g~~~-~y~~igtGN~ 466 (705)
T 2o8r_A 413 ---------ENNLRLSERMRRSGIRIVYS--M--------------PGLKVHAKTALILYHTPAGERPQ-GIALLSTGNF 466 (705)
T ss_dssp -----------CHHHHHHHHHHTCEEEEC--C--------------TTCCBCCCEEEEEECCCSSSCCC-EEEEEESSCS
T ss_pred ---------hhhHHHHHHHHHCCCEEEEc--c--------------CCCCceeEEEEEecccccCCcee-EEEeccccce
Confidence 01235678899999998742 1 236899999999985 222211 1233332222
Q ss_pred CCCccCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeCh-HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 045478 392 CDGRYDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGP-AAYDILINFEQRWRRSTKWREFRLKKVTH 470 (852)
Q Consensus 392 ~~~r~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gp-aa~dl~~~F~~rW~~~~~~~~~~~~~~~~ 470 (852)
.+. .-.-|.|+++...+| ++.|+...|...|... .
T Consensus 467 n~~--------------------------------tariy~D~~l~t~~~~i~~dl~~vF~~~tg~~--~---------- 502 (705)
T 2o8r_A 467 NET--------------------------------TARIYSDTTLMTANTDIVHDVYRLFRILDGDP--E---------- 502 (705)
T ss_dssp SCC--------------------------------CSSCEEEEEEEECCHHHHHHHHHHHHHHTTCC--C----------
T ss_pred eee--------------------------------EEEEEeeeeeeecChHHHHHHHHHHHHHhCCC--C----------
Confidence 220 012467777777775 6799999996655421 0
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCceeeEEecccCCCCCCCCCChHHHHHhhhhcccCccchhHHHHH
Q 045478 471 WYDDSLINLDRIGITPSTGPHSYKPTRAGSEKETENWHIQVFRSIDSGSVKGFPKDVEEAVAQNLVCAKDLKVDKSIHSA 550 (852)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~~~~~~~l~~~~~~~~e~sI~~a 550 (852)
+ ... .|++-+ |.+ ....|.+.
T Consensus 503 -------------------~--------------~~~-~~l~~s---------P~~----------------~~~~i~~~ 523 (705)
T 2o8r_A 503 -------------------P--------------ARF-SRLLVA---------RYN----------------MGEAITNL 523 (705)
T ss_dssp -------------------C--------------SCC-SSCEET---------TTT----------------HHHHHHHH
T ss_pred -------------------C--------------CCc-eEEEEC---------Cch----------------HHHHHHHH
Confidence 0 000 233321 221 13678899
Q ss_pred HHHHHHhccc----eEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEe-------cCCCCCC
Q 045478 551 YVKAIRSAQH----FIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVI-------PMWPEGN 619 (852)
Q Consensus 551 yl~aI~~Ak~----~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~Ivl-------P~~peg~ 619 (852)
+..+|.+|++ +|+|.++| + |+. .+..++.+|. .+||+|.|++ |..| .
T Consensus 524 i~~eI~~Ak~G~~a~I~ik~n~-l------~D~-----------~ii~aL~~As--~~GV~V~LIVRGiC~L~Pgv~--~ 581 (705)
T 2o8r_A 524 IEREIENVKRGKRGYMLLKMNG-L------QDK-----------NVITQLYRAS--EAGVEIDLIVRGICCLVPDMP--Q 581 (705)
T ss_dssp HHHHHHHHHTTCCCEEEEEESC-B------CCH-----------HHHHHHHHHH--HTTCEEEEEESSCBCSCCSSG--G
T ss_pred HHHHHHHHhcCCCCEEEEEcCC-C------CCH-----------HHHHHHHHHH--HCCCeEEEEEccccccCCCCC--C
Confidence 9999999999 99999998 4 222 3334444442 3789999999 4211 0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhccee
Q 045478 620 PNSAAVQEILYWQGQTMSMMYKIVAQALQDNGLSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFM 699 (852)
Q Consensus 620 ~~~~~~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (852)
++ -+.+... +. .
T Consensus 582 sd---------------------------------------ni~V~Si---------vg--------------------r 593 (705)
T 2o8r_A 582 SR---------------------------------------NIRVTRL---------VD--------------------M 593 (705)
T ss_dssp GT---------------------------------------TEEEEEC---------CS--------------------S
T ss_pred CC---------------------------------------CeEEEee---------HH--------------------H
Confidence 00 0111110 00 1
Q ss_pred EEEEeeEEEE---cceeEEecCcCcccCCCCCCCCceeEEEEecCccc
Q 045478 700 IYVHAKGMIV---DDEYVIMGSANINQRSLEGSRDTEIAMGAYQPHYT 744 (852)
Q Consensus 700 iyvHSKlmIV---DD~~~iIGSANln~RSm~~n~DsEi~v~i~d~~~~ 744 (852)
..=|+|+++. ||.+++||||||+.|||..| .|+++.|+|+++.
T Consensus 594 ~Leh~RIy~f~~gd~~~~~IGSAn~m~Rnl~~r--~Ev~~~i~d~~~~ 639 (705)
T 2o8r_A 594 YLEHSRIWCFHNGGKEEVFISSADWMKRNLYNR--IETACPVLDPTLR 639 (705)
T ss_dssp SEECCCEEEECGGGSCEEEEESCCBCHHHHHTS--BCEEEECCSHHHH
T ss_pred HHhcCEEEEEECCCCcEEEEeccccchhhhhhe--eEEEEEEcCHHHH
Confidence 2458899999 99999999999999999855 9999999998543
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=8.2e-20 Score=177.86 Aligned_cols=127 Identities=20% Similarity=0.349 Sum_probs=105.5
Q ss_pred eeeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCC
Q 045478 23 VFLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCEN 102 (852)
Q Consensus 23 ~~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~n 102 (852)
++++|.|+|+|++|++|+++|..++.. +|.+ ...++||||+|.+++.+++||+++.++.|
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~~------------------~~g~sDPYv~v~l~~~~~~kT~v~~ktln 84 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHS--LFKK------------------GHQLLDPYLTVSVDQVRVGQTSTKQKTNK 84 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTT--TSSS------------------SCCCCCEEEEEEETTEEEEECCCCSSCSS
T ss_pred ccCccEEEEEEEEEECCCCcccccccc--cccc------------------CCCCCCeEEEEEECCEeeEEeeecCCCCC
Confidence 368999999999999999988543211 1210 01128999999999988899999999999
Q ss_pred CeeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCC----CceeeeeeeccCCCCCCCCCCEEEEEEEe
Q 045478 103 PFWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCG----NEVDDWFPIAGSYGKNLKPFPQLHVSMQY 177 (852)
Q Consensus 103 P~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g----~~~~~w~~L~~~~g~~~k~~g~l~l~l~f 177 (852)
|+|||+|.|.+.. ...+.|+|+|++.++ +++||++.||+.++..+ ...+.||+|. +.|+|+|+++|
T Consensus 85 P~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~--------~~G~i~l~l~~ 155 (157)
T 2fk9_A 85 PTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE--------PEGKVFVVITL 155 (157)
T ss_dssp CEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB--------SSCEEEEEEEE
T ss_pred CccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC--------CCcEEEEEEEE
Confidence 9999999999864 568899999999998 99999999999999855 6789999993 36899999998
Q ss_pred e
Q 045478 178 K 178 (852)
Q Consensus 178 ~ 178 (852)
.
T Consensus 156 ~ 156 (157)
T 2fk9_A 156 T 156 (157)
T ss_dssp C
T ss_pred E
Confidence 4
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.78 E-value=2.4e-18 Score=163.35 Aligned_cols=123 Identities=24% Similarity=0.289 Sum_probs=108.6
Q ss_pred eeeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCC
Q 045478 23 VFLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCEN 102 (852)
Q Consensus 23 ~~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~n 102 (852)
....|.|.|+|++|++|++++..+. +||||+|.+++.+ .||+++.++.|
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~-~kT~~~~~t~n 57 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGK------------------------------SDPFCLLELGNDR-LQTHTVYKNLN 57 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSC------------------------------CCEEEEEEETTEE-EECCCCSSCSS
T ss_pred cCCceEEEEEEEeeECCCCCCCCCC------------------------------cCeEEEEEECCEE-EEeeeecCCCC
Confidence 3468999999999999999987776 8999999999876 79999999999
Q ss_pred CeeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEEEeee
Q 045478 103 PFWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQYKP 179 (852)
Q Consensus 103 P~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~~ 179 (852)
|.|||+|.|.+.+....+.|+|+|.+.++ +++||++.|++.++..|. ..|++|....++. +..|+|+|+++|..
T Consensus 58 P~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 58 PEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp CCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred CccccEEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 99999999999887788999999999987 999999999999998764 5899997665443 57899999999863
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=4.7e-18 Score=162.78 Aligned_cols=124 Identities=20% Similarity=0.357 Sum_probs=109.1
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCCCe
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCENPF 104 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~nP~ 104 (852)
..|.|.|+|++|++|+.++. +. +||||+|.+.+.+ .||+++.++.||+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~------------------------------~dpyv~v~~~~~~-~kT~v~~~t~nP~ 52 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GK------------------------------PDPIVSVIFKDEK-KKTKKVDNELNPV 52 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SC------------------------------CCEEEEEECSSCE-EECCCCCSCSSCE
T ss_pred CCcEEEEEEEEeeCCCCCCC-CC------------------------------CCeEEEEEECCEe-EEeeeecCCCCCc
Confidence 47899999999999999887 65 8999999999876 8999999999999
Q ss_pred eeeEEEEeecC----CCceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeee---eccCCCCCCCCCCEEEEEEE
Q 045478 105 WDEHFCVPVAH----SVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFP---IAGSYGKNLKPFPQLHVSMQ 176 (852)
Q Consensus 105 WnE~f~~~~~~----~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~---L~~~~g~~~k~~g~l~l~l~ 176 (852)
|||+|.|.+.. ....+.|+|+|++.++ +++||.+.|++.++..+...+.|++ |.+..++ +..|+|+|+++
T Consensus 53 wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~--~~~G~l~l~~~ 130 (140)
T 2dmh_A 53 WNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQ--DTGATIDLVIG 130 (140)
T ss_dssp EEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCC--EEEEEEEEEEE
T ss_pred cCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCC--CCCCEEEEEEE
Confidence 99999999865 3577899999999987 8999999999999998888899988 7665553 34699999999
Q ss_pred eeecCC
Q 045478 177 YKPIGQ 182 (852)
Q Consensus 177 f~~~~~ 182 (852)
|.|...
T Consensus 131 ~~p~~~ 136 (140)
T 2dmh_A 131 YDPPSG 136 (140)
T ss_dssp ECCCBS
T ss_pred EECCCC
Confidence 999654
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=4.4e-18 Score=162.30 Aligned_cols=129 Identities=20% Similarity=0.396 Sum_probs=105.3
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCCC
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCENP 103 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~nP 103 (852)
+++|+|.|+|++|++|+++|.+++.. +.+ ......+||||+|.+++..+++|+++.++.||
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~---~g~----------------~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP 63 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDA---VGP----------------RPQTFLLDPYIALNVDDSRIGQTATKQKTNSP 63 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC----CCS----------------SCCCCCCCEEEEEEETTEEEEECCCCSSCSSC
T ss_pred ccceEEEEEEEeCcCCCCcccccccc---ccc----------------ccCCcCcCcEEEEEECCeEeeeeeEECCCcCC
Confidence 47999999999999999988654210 000 00112289999999999888999999999999
Q ss_pred eeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCC--CceeeeeeeccCCCCCCCCCCEEEEEEEeeec
Q 045478 104 FWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCG--NEVDDWFPIAGSYGKNLKPFPQLHVSMQYKPI 180 (852)
Q Consensus 104 ~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g--~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~~~ 180 (852)
+|||+|.|.+... ..+.|+|+|++.++ +++||.+.|++.++..+ ...+.|++|. +.|+|+|+++|.+.
T Consensus 64 ~WnE~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 64 AWHDEFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred ccCCEEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 9999999998755 78999999999888 89999999999999864 3458999882 36899999999763
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.75 E-value=8.6e-18 Score=163.52 Aligned_cols=124 Identities=26% Similarity=0.358 Sum_probs=101.9
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC-----eeEEEeeeecC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG-----ATVAQTRVISN 99 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~-----~~~~rT~vi~~ 99 (852)
..|.|.|+|++|++|++++.++. +||||+|.+.. ....||+++.+
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~~~~kT~v~~~ 67 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGA------------------------------SDPYVRVTLYDPMNGVLTSVQTKTIKK 67 (153)
T ss_dssp TCEEEEEEEEEEESCC-------------------------------------CCEEEEEEEEETTTEEEEEEECCCCSS
T ss_pred CccEEEEEEEEeeCCCCCCCCCC------------------------------CCcEEEEEEECCCCccceeeeCccccC
Confidence 46899999999999999887776 89999999974 35689999999
Q ss_pred CCCCeeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCCCce------eeeeeeccCCCCCCCCCCEEE
Q 045478 100 CENPFWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEV------DDWFPIAGSYGKNLKPFPQLH 172 (852)
Q Consensus 100 s~nP~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~------~~w~~L~~~~g~~~k~~g~l~ 172 (852)
+.||.|||+|.|.+......+.|+|+|++.++ +++||++.|++.++..+... ..||+|....++ .+..|+|+
T Consensus 68 t~nP~wne~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~i~ 146 (153)
T 3b7y_A 68 SLNPKWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHK-SRVKGYLR 146 (153)
T ss_dssp CSSCCCCEEEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTT-CCCCSEEE
T ss_pred CCCCCCCCEEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCC-CCcceEEE
Confidence 99999999999999887788999999999987 99999999999999876542 589999554433 36789999
Q ss_pred EEEEeee
Q 045478 173 VSMQYKP 179 (852)
Q Consensus 173 l~l~f~~ 179 (852)
|+++|.|
T Consensus 147 l~l~~~P 153 (153)
T 3b7y_A 147 LKMTYLP 153 (153)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999986
No 10
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.75 E-value=3.2e-18 Score=163.10 Aligned_cols=123 Identities=23% Similarity=0.452 Sum_probs=109.5
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeec-CCCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVIS-NCENP 103 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~-~s~nP 103 (852)
..|.|.|+|++|++|++++.++. +||||+|.+.+.. .||+++. ++.||
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~-~kT~~~~~~~~nP 56 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNN------------------------------MDPYVQLTCRTQD-QKSNVAEGMGTTP 56 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCS------------------------------SCCCEEEESSSCE-EECCCCTTCCSSC
T ss_pred CcEEEEEEEEeccCCCCcccCCC------------------------------cCceEEEEECCcc-ceeEeccCCCCCC
Confidence 58999999999999999987766 8999999999876 6999998 89999
Q ss_pred eeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceec-cCCCceeeeeeeccCCCCCCCCCCEEEEEEEeeecC
Q 045478 104 FWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKI-LCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQYKPIG 181 (852)
Q Consensus 104 ~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l-~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~~~~ 181 (852)
.|||+|.|.+......+.|+|+|++.++ +++||.+.|++.++ ..+...+.|++|. ..+ +..|+|+|+++|.|..
T Consensus 57 ~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~---~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 57 EWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDE---EYKGEIWVALSFKPSG 132 (136)
T ss_dssp EEEEEEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETT---EEEEEEEEEEEEEECC
T ss_pred ccCcEEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCC---ccCEEEEEEEEEEeCC
Confidence 9999999999987788999999999987 99999999999999 4566678999996 333 4679999999999976
Q ss_pred C
Q 045478 182 Q 182 (852)
Q Consensus 182 ~ 182 (852)
.
T Consensus 133 ~ 133 (136)
T 1wfj_A 133 P 133 (136)
T ss_dssp S
T ss_pred C
Confidence 5
No 11
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.75 E-value=3e-17 Score=158.73 Aligned_cols=119 Identities=21% Similarity=0.388 Sum_probs=104.3
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCCCee
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCENPFW 105 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~nP~W 105 (852)
.|.|.|+|++|++|+++|.++. +||||++.+++.. .||+++.++.||.|
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~-~kT~~~~~t~nP~W 64 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGS------------------------------SDPYVTVQVGKTK-KRTKTIYGNLNPVW 64 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEETTEE-EECCCCCSCSSCEE
T ss_pred ccEEEEEEEeeeCCCCCCCCCC------------------------------cCeEEEEEECCEE-EECCccCCCCCCCc
Confidence 7999999999999999988776 9999999998766 79999999999999
Q ss_pred eeEEEEeecCCCceEEEEEEecCCC-----------C-CceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEE
Q 045478 106 DEHFCVPVAHSVVNLEFHVKDNDIL-----------G-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHV 173 (852)
Q Consensus 106 nE~f~~~~~~~~~~l~~~V~d~d~~-----------~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l 173 (852)
||+|.|.+..+...+.|+|+|.+.. + +++||++.|++.++. ...+.|++|....+ ..+..|+|+|
T Consensus 65 ne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~-~~~~~G~i~l 141 (148)
T 3kwu_A 65 EENFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTD-KSAVSGAIRL 141 (148)
T ss_dssp EEEEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSST-TCCCCCEEEE
T ss_pred ccEEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCC-CCCCceEEEE
Confidence 9999999988888899999999985 5 999999999999983 45789999964333 2356799999
Q ss_pred EEEee
Q 045478 174 SMQYK 178 (852)
Q Consensus 174 ~l~f~ 178 (852)
+++|.
T Consensus 142 ~l~~e 146 (148)
T 3kwu_A 142 HISVE 146 (148)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
No 12
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.72 E-value=4.4e-17 Score=162.52 Aligned_cols=124 Identities=25% Similarity=0.381 Sum_probs=100.0
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCe-----eEEEeeeecCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGA-----TVAQTRVISNC 100 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~-----~~~rT~vi~~s 100 (852)
.|.|.|+|++|++|++++.++. +||||+|.+.+. ...||+++.++
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~------------------------------~DPyv~v~l~~~~~~~~~~~kT~v~~~t 56 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGA------------------------------SDPYVRVTLYDPMSGILTSVQTKTIKKS 56 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCC------------------------------CCEEEEEEEEETTTEEEEEEECCCCSSC
T ss_pred cEEEEEEEEEeeCCCCcCCCCC------------------------------cCcEEEEEEECCCCCcccceeCceECCC
Confidence 5899999999999999988776 999999999741 45899999999
Q ss_pred CCCeeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCCCce-e-----eeeeeccCCCCCCCCCCEEEE
Q 045478 101 ENPFWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEV-D-----DWFPIAGSYGKNLKPFPQLHV 173 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~-~-----~w~~L~~~~g~~~k~~g~l~l 173 (852)
.||.|||+|.|.+......|.|+|||.+.++ +++||.+.|++.++..+... + .||+|....++ .+..|+|+|
T Consensus 57 ~nP~Wne~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~-~~~~G~l~l 135 (176)
T 3m7f_B 57 LNPKWNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHK-SRVKGYLRL 135 (176)
T ss_dssp SSCEEEEEEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTT-CCCCSEEEE
T ss_pred CCCcccceEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCC-CccCEEEEE
Confidence 9999999999999877778999999999987 89999999999999876433 2 79999654333 356899999
Q ss_pred EEEeeec
Q 045478 174 SMQYKPI 180 (852)
Q Consensus 174 ~l~f~~~ 180 (852)
+++|.|.
T Consensus 136 ~l~~~p~ 142 (176)
T 3m7f_B 136 KMTYLPK 142 (176)
T ss_dssp EEEECC-
T ss_pred EEEEEeC
Confidence 9999997
No 13
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=3.4e-17 Score=153.71 Aligned_cols=118 Identities=21% Similarity=0.336 Sum_probs=100.5
Q ss_pred eeEEEEEEEEecCCCCC---CCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCe--eEEEeeeecCC
Q 045478 26 HGDLDLSILEAKSLPNM---DLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGA--TVAQTRVISNC 100 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~--~~~rT~vi~~s 100 (852)
+|.|.|+|++|++|+++ +..+. +||||++.+.+. ...||+++.++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~kT~v~~~t 51 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDT------------------------------PDPYVELFISTTPDSRKRTRHFNND 51 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCC------------------------------CCEEEEEECTTSTTCCEECCCCTTC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCC------------------------------CCCEEEEEEccCCCceEEccccCCC
Confidence 58999999999999985 33444 899999999862 55899999999
Q ss_pred CCCeeeeEEEEeecC-CCceEEEEEEecCCCCCceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEEEeee
Q 045478 101 ENPFWDEHFCVPVAH-SVVNLEFHVKDNDILGAELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQYKP 179 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~-~~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~~ 179 (852)
.||.|||+|.|.+.. ....+.|+|+|++..++++||.+.|++.++..|...+.|++|.. ++.|.|+|+++..|
T Consensus 52 ~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 52 INPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEVAS 125 (126)
T ss_dssp SSCEEEEEEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEECCC
T ss_pred CCCcccceEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEeCC
Confidence 999999999999954 45778999999998889999999999999999999999999942 34577887777554
No 14
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=9.2e-17 Score=159.52 Aligned_cols=130 Identities=22% Similarity=0.333 Sum_probs=105.2
Q ss_pred CCceeeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecC
Q 045478 20 DEPVFLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISN 99 (852)
Q Consensus 20 ~~~~~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~ 99 (852)
+......+.|.|+|++|++|++.+.+++ +||||+|.+++ .+.||+++.+
T Consensus 29 ~~~~~~~~~L~V~V~~A~~L~~~~~~~~------------------------------sDPYv~v~~~~-~~~kT~v~~~ 77 (173)
T 2nq3_A 29 MGSLTMKSQLQITVISAKLKENKKNWFG------------------------------PSPYVEVTVDG-QSKKTEKCNN 77 (173)
T ss_dssp --CCSCCEEEEEEEEEEEECCCC--CCC------------------------------CCEEEEEEETT-EEEECCCCSS
T ss_pred ccccCCceEEEEEEEEeECCCCcccCCC------------------------------CCeEEEEEECC-EEeEccccCC
Confidence 3334568999999999999995444443 89999999998 5589999999
Q ss_pred CCCCeeeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCCC-----ceeeeeeeccCCCCCCCCCCEEEE
Q 045478 100 CENPFWDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGN-----EVDDWFPIAGSYGKNLKPFPQLHV 173 (852)
Q Consensus 100 s~nP~WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~-----~~~~w~~L~~~~g~~~k~~g~l~l 173 (852)
+.||+|||+|.|.+. +...+.|+|||++.++ +++||++.|++.++..+. ....|++|....+ ..+..|+|++
T Consensus 78 tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v 155 (173)
T 2nq3_A 78 TNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSI 155 (173)
T ss_dssp CSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEE
T ss_pred CCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEE
Confidence 999999999999985 4778999999999987 899999999999987432 2367999976533 3356799999
Q ss_pred EEEeeecCC
Q 045478 174 SMQYKPIGQ 182 (852)
Q Consensus 174 ~l~f~~~~~ 182 (852)
.+.|.++..
T Consensus 156 ~l~~l~~~~ 164 (173)
T 2nq3_A 156 CLDGLQLES 164 (173)
T ss_dssp EEESEECC-
T ss_pred EEeeeecch
Confidence 999998844
No 15
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.69 E-value=5.7e-17 Score=164.39 Aligned_cols=134 Identities=18% Similarity=0.202 Sum_probs=101.0
Q ss_pred hhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCccccccccccc
Q 045478 239 GQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFIKTE 318 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~~~~ 318 (852)
+..|+.|+++|++||++|+|+.|.|.. ..|.++|.+||+|||+||||+ |......
T Consensus 45 ~~~~~~ll~~I~~A~~sI~i~~y~~~~-----------------~~i~~aL~~aa~rGV~Vrii~-D~~~~~~------- 99 (196)
T 4ggj_A 45 ESSLSRLLRALLAARSSLELCLFAFSS-----------------PQLGRAVQLLHQRGVRVRVIT-DCDYMAL------- 99 (196)
T ss_dssp CCHHHHHHHHHHTCSSEEEEEESCBCC-----------------HHHHHHHHHHHHTTCEEEEEE-SSCCC---------
T ss_pred HHHHHHHHHHHHHhheEEEEEEEEeCC-----------------HHHHHHHHHHHHcCCcEEEEE-ecccccc-------
Confidence 567999999999999999999987632 589999999999999999997 8632111
Q ss_pred ccccCCcHHHHhhhcCCCCEEEecCCCCCCcchhhhhccccccccCccceEEecCCCCCCCCceEEEEcccCCCCCccCC
Q 045478 319 GVMQTHDEETRKFFKHSSVNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTPASGNNRKISAFIGGLDLCDGRYDT 398 (852)
Q Consensus 319 ~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl~~~r~Dt 398 (852)
.......|...||+|+.... ...+|+|++|||++ ++|+||.|++...+.
T Consensus 100 ------~~~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~~--------~~~~GS~N~t~~~~~- 148 (196)
T 4ggj_A 100 ------NGSQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDKK--------VLITGSLNWTTQAIQ- 148 (196)
T ss_dssp -------CCHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETTT--------EEEEESCCBCHHHHH-
T ss_pred ------cHHHHHHHHhcCCCcccccc----------------cccccCcEEEEcce--------EEEecCccCChhhhc-
Confidence 11234567788999885432 13579999999998 999999999873221
Q ss_pred CCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeee-ChHHHHHHHHHHHHHhhhhh
Q 045478 399 PEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVE-GPAAYDILINFEQRWRRSTK 459 (852)
Q Consensus 399 ~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~-Gpaa~dl~~~F~~rW~~~~~ 459 (852)
..| +..+.+. +++|..+.+.|.+.|+....
T Consensus 149 ------------------------------~n~-E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 149 ------------------------------NNR-ENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp ------------------------------HCC-EEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------ccc-eeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 112 3444455 45789999999999997543
No 16
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.68 E-value=3.4e-16 Score=148.24 Aligned_cols=121 Identities=19% Similarity=0.314 Sum_probs=100.8
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC-eeEEEeeeecCCCCCe
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG-ATVAQTRVISNCENPF 104 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~-~~~~rT~vi~~s~nP~ 104 (852)
...|+|+|++|++|+++|.++. +||||+|.+.+ ....||+++.++.||.
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~------------------------------sDpyv~v~~~~~~~~~kT~v~~~t~nP~ 53 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRL------------------------------PDPFAKIVVDGSGQCHSTDTVKNTLDPK 53 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCC------------------------------CCEEEEEEETTTCCEEECCCCSSCSSCE
T ss_pred eEEEEEEEEEeECCCCCCCCCC------------------------------cCeEEEEEECCCCceEECCccCCCCCCC
Confidence 4679999999999999998776 99999999975 4568999999999999
Q ss_pred eeeEEEEeecCCCceEEEEEEecCCCC----CceeeeEeeeceecc-CCCceeeeeeeccCC-CCCCCCCCEEEEEEEe
Q 045478 105 WDEHFCVPVAHSVVNLEFHVKDNDILG----AELIGVVQIPVEKIL-CGNEVDDWFPIAGSY-GKNLKPFPQLHVSMQY 177 (852)
Q Consensus 105 WnE~f~~~~~~~~~~l~~~V~d~d~~~----~~~iG~~~i~l~~l~-~g~~~~~w~~L~~~~-g~~~k~~g~l~l~l~f 177 (852)
|||+|.|.+.... .+.|+|||++.++ +++||.+.|++..+. .+.....|++|.... ..+.+..|+|+|++++
T Consensus 54 wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 54 WNQHYDLYVGKTD-SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEEEEEEEEETTC-CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred ccCEEEEEeCCCC-EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9999999997654 4999999999886 699999999999883 344456889996542 2334568999998875
No 17
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=9.5e-16 Score=148.42 Aligned_cols=106 Identities=25% Similarity=0.397 Sum_probs=92.9
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecC
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISN 99 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~ 99 (852)
+..|.|.|+|++|++|++++..+. +||||+|.+.. ....||+++.+
T Consensus 28 ~~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~~~kT~v~~~ 77 (149)
T 1a25_A 28 IDREVLIVVVRDAKNLVPMDPNGL------------------------------SDPYVKLKLIPDPKSESKQKTKTIKC 77 (149)
T ss_dssp ESSSEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEEESCTTCSSCEECCCCSS
T ss_pred ecCCEEEEEEEEeeCCCCCCCCCC------------------------------cCeEEEEEEECCCCCcceEecceeCC
Confidence 347899999999999999987766 89999999974 45689999999
Q ss_pred CCCCeeeeEEEEeecCC--CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccC
Q 045478 100 CENPFWDEHFCVPVAHS--VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGS 160 (852)
Q Consensus 100 s~nP~WnE~f~~~~~~~--~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~ 160 (852)
+.||.|||+|.|.+... ...|.|+|||.+.++ +++||.+.|++.++..+ ..+.||+|...
T Consensus 78 t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 78 SLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp CSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred CCCCcCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 99999999999998764 357899999999987 89999999999999876 48899999653
No 18
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.62 E-value=2.1e-15 Score=143.36 Aligned_cols=105 Identities=19% Similarity=0.397 Sum_probs=90.9
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC----CeeEEEeeeecC
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS----GATVAQTRVISN 99 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~----~~~~~rT~vi~~ 99 (852)
...|.|.|+|++|++|+. +..+. +||||+|.+. .....||+++.+
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~------------------------------~DPyv~v~l~~~~~~~~~~kT~v~~~ 65 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGAD------------------------------PNPYVKTYLLPDTHKTSKRKTKISRK 65 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCC------------------------------CCEEEEEEEESCSSSCCCEECCCCCS
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCC------------------------------CCeEEEEEEEcCCCCCceecCCcCcC
Confidence 467899999999999996 55554 8999999982 234589999999
Q ss_pred CCCCeeeeEEEEe-ecC---CCceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeecc
Q 045478 100 CENPFWDEHFCVP-VAH---SVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAG 159 (852)
Q Consensus 100 s~nP~WnE~f~~~-~~~---~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~ 159 (852)
+.||+|||+|.|. +.. ....+.|+|+|.+.++ +++||++.|++.++..+...+.||+|..
T Consensus 66 t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 66 TRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 9999999999999 654 3468899999999988 8999999999999998888999999953
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=1.6e-15 Score=147.34 Aligned_cols=105 Identities=28% Similarity=0.466 Sum_probs=92.9
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC--CeeEEEeeeecCCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS--GATVAQTRVISNCEN 102 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~--~~~~~rT~vi~~s~n 102 (852)
..+.|.|+|++|++|++++..+. +||||+|.+. +....||+++.++.|
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~kT~v~~~t~n 89 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGT------------------------------SDPYVKVFLLPDKKKKFETKVHRKTLN 89 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEEETTCCSCEECCCCTTCSS
T ss_pred CCCEEEEEEEEeECCCCccCCCC------------------------------cCeEEEEEEEcCCCceEeccccCCCCC
Confidence 35899999999999999987766 8999999994 234589999999999
Q ss_pred CeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeecc
Q 045478 103 PFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAG 159 (852)
Q Consensus 103 P~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~ 159 (852)
|.|||+|.|.+... ...+.|+|+|.+.++ +++||++.|++.++..|...+.|++|..
T Consensus 90 P~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 90 PVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CcCcccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 99999999998653 467899999999987 9999999999999998888999999954
No 20
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.61 E-value=1.7e-15 Score=145.41 Aligned_cols=104 Identities=28% Similarity=0.469 Sum_probs=92.1
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC--CeeEEEeeeecCCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS--GATVAQTRVISNCEN 102 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~--~~~~~rT~vi~~s~n 102 (852)
..|.|.|+|++|++|+.++..+. +||||+|.+. +....||+++.++.|
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~l~~~~~~~~kT~v~~~t~n 81 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGT------------------------------SDPYVKVFLLPDKKKKFETKVHRKTLN 81 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBC------------------------------CCEEEEEEEESCCSCCEECCCCCSCSS
T ss_pred CCCEEEEEEEEecCCCCCCCCCC------------------------------cCcEEEEEEECCCCccEECccCcCCCC
Confidence 35889999999999999887665 8999999993 334689999999999
Q ss_pred CeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeec
Q 045478 103 PFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIA 158 (852)
Q Consensus 103 P~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~ 158 (852)
|.|||+|.|.+... ...+.|+|||.+.++ +++||++.|++.++..+...+.|++|.
T Consensus 82 P~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 82 PVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CEEEEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CcCcCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 99999999998643 367899999999987 899999999999999998999999994
No 21
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.60 E-value=1.6e-15 Score=147.45 Aligned_cols=108 Identities=25% Similarity=0.379 Sum_probs=86.4
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEE--CCee--EEEeeeecCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCL--SGAT--VAQTRVISNC 100 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l--~~~~--~~rT~vi~~s 100 (852)
..|.|.|+|++|++|++++..+. +||||+|.+ ++.. ..||+++.++
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~~~kT~v~~~t 77 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGL------------------------------SDPYVKVNLYHAKKRISKKKTHVKKCT 77 (153)
T ss_dssp TTTEEEEEEEEEESCC------C------------------------------CCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred CCCEEEEEEEEeECCCCcCCCCC------------------------------CCeEEEEEEEeCCeEeceEecCcccCC
Confidence 36889999999999999887766 899999999 4442 5799999999
Q ss_pred CCCeeeeEEEEeecCCC---ceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCC
Q 045478 101 ENPFWDEHFCVPVAHSV---VNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKN 164 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~~---~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~ 164 (852)
.||.|||+|.|.+.... ..+.|+|+|.+.++ +++||.+.|++.+ .+...+.|++|+...+++
T Consensus 78 ~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~ 143 (153)
T 1w15_A 78 PNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQ 143 (153)
T ss_dssp SSEEEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCC
T ss_pred CCCeecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCe
Confidence 99999999999987642 67899999999987 9999999999987 455677888887655543
No 22
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=3.3e-15 Score=143.09 Aligned_cols=105 Identities=27% Similarity=0.387 Sum_probs=92.2
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC--CeeEEEeeeecCCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS--GATVAQTRVISNCEN 102 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~--~~~~~rT~vi~~s~n 102 (852)
..+.|.|+|++|++|++++..+. +||||+|.+. +....||+++.++.|
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~kT~v~~~t~n 73 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGT------------------------------SDPFVKIYLLPDKKHKLETKVKRKNLN 73 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSC------------------------------CCEEEEEEEESCCSSEEECCCCTTCSS
T ss_pred CCCEEEEEEEEeECCCCCCCCCC------------------------------CCcEEEEEEECCCCccEeCceEcCCCC
Confidence 46889999999999999887765 8999999995 234689999999999
Q ss_pred CeeeeEEEEeecC----CCceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeecc
Q 045478 103 PFWDEHFCVPVAH----SVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAG 159 (852)
Q Consensus 103 P~WnE~f~~~~~~----~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~ 159 (852)
|.|||+|.|.+.. ....+.|+|+|.+.++ +++||.+.|++.++..+...+.|++|..
T Consensus 74 P~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 74 PHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp CCCCEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred CccccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 9999999998533 2467899999999987 8999999999999998888899999954
No 23
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.60 E-value=5.4e-15 Score=143.84 Aligned_cols=135 Identities=16% Similarity=0.256 Sum_probs=105.7
Q ss_pred hhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCccccccccccc
Q 045478 239 GQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFIKTE 318 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~~~~ 318 (852)
+..++.+.++|++|+++|+|+.|.|.+ ..|.++|.+|++|||+||||+ |..++....
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~~~-----------------~~i~~aL~~a~~rGV~Vril~-~~~~~~~~~----- 69 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSFTA-----------------PDIMKALVAAKKRGVDVKIVI-DERGNTGRA----- 69 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSBCC-----------------HHHHHHHHHHHHTTCEEEEEE-ESTTCCSHH-----
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEeCC-----------------HHHHHHHHHHHHCCCEEEEEE-eCccccccc-----
Confidence 467899999999999999999887621 489999999999999999997 655332100
Q ss_pred ccccCCcHHHHhhhcCCCCEEEecCCCCCCcchhhhhccccccccCccceEEecCCCCCCCCceEEEEcccCCCCCccCC
Q 045478 319 GVMQTHDEETRKFFKHSSVNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTPASGNNRKISAFIGGLDLCDGRYDT 398 (852)
Q Consensus 319 ~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl~~~r~Dt 398 (852)
.....+.|.+.|++++.+.. ...+|.|++|||++ ++++||.|++. +..
T Consensus 70 ------~~~~~~~L~~~gv~v~~~~~----------------~~~~H~K~~iiD~~--------~~~iGS~N~~~-~~~- 117 (155)
T 1byr_A 70 ------SIAAMNYIANSGIPLRTDSN----------------FPIQHDKVIIVDNV--------TVETGSFNFTK-AAE- 117 (155)
T ss_dssp ------HHHHHHHHHHTTCCEEEECS----------------SSCCCCCEEEETTT--------EEEEESCCBSH-HHH-
T ss_pred ------cHHHHHHHHHCCCeEEEcCC----------------cccccceEEEECCC--------EEEEECCCCCc-ccc-
Confidence 23456667788999886431 12679999999998 99999999987 321
Q ss_pred CCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeCh--HHHHHHHHHHHHHhhhh
Q 045478 399 PEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGP--AAYDILINFEQRWRRST 458 (852)
Q Consensus 399 ~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gp--aa~dl~~~F~~rW~~~~ 458 (852)
..|++..+.++|+ .+.++...|.+.|+.+.
T Consensus 118 ------------------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~~ 149 (155)
T 1byr_A 118 ------------------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQGR 149 (155)
T ss_dssp ------------------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTCE
T ss_pred ------------------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhCC
Confidence 2467889999994 78999999999998643
No 24
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.60 E-value=3e-15 Score=142.43 Aligned_cols=105 Identities=24% Similarity=0.402 Sum_probs=92.1
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC----CeeEEEeeeecCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS----GATVAQTRVISNC 100 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~----~~~~~rT~vi~~s 100 (852)
-.|.|.|+|++|++|++++.++. +||||+|.+. .....||+++.++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~------------------------------~dpyv~v~~~~~~~~~~~~kT~~~~~t 63 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGL------------------------------SDPYVKLKLIPDPKNESKQKTKTIRST 63 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEEECCTTCCCCEECCCCCSC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCC------------------------------CCeeEEEEEEcCCCCCeeecCceEcCC
Confidence 57999999999999999987776 8999999994 3445899999999
Q ss_pred CCCeeeeEEEEeecCC--CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccC
Q 045478 101 ENPFWDEHFCVPVAHS--VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGS 160 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~--~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~ 160 (852)
.||.|||+|.|.+... ...+.|+|+|.+.++ +++||.+.|++.++..+. .++||+|.+.
T Consensus 64 ~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 64 LNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp SSCEEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCCcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9999999999998653 357899999999987 999999999999998665 8899999754
No 25
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.60 E-value=2.4e-15 Score=149.14 Aligned_cols=106 Identities=22% Similarity=0.348 Sum_probs=93.3
Q ss_pred eeeEEEEEEEEecCCCCCCC-cchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCe----eEEEeeeecC
Q 045478 25 LHGDLDLSILEAKSLPNMDL-ITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGA----TVAQTRVISN 99 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~----~~~rT~vi~~ 99 (852)
..|.|.|+|++|++|+++|. .+. +||||+|.+... ...||+++.+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~------------------------------~DPyv~v~l~~~~~~~~~~kT~v~~~ 77 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKST------------------------------PAPYVKVYLLENGACIAKKKTRIARK 77 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CC------------------------------CEEEEEEEEEETTEEEEEEECCCCCS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCC------------------------------CCceEEEEEECCCccccceeCccCCC
Confidence 57899999999999999885 455 899999998642 3689999999
Q ss_pred CCCCeeeeEEEEeecCCCceEEEEEE-ecCCCC-CceeeeEeeeceeccCCCceeeeeeeccC
Q 045478 100 CENPFWDEHFCVPVAHSVVNLEFHVK-DNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGS 160 (852)
Q Consensus 100 s~nP~WnE~f~~~~~~~~~~l~~~V~-d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~ 160 (852)
+.||+|||+|.|.+......+.|+|| |.+.++ +++||.+.|++.++..+...+.||+|...
T Consensus 78 t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 78 TLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp CSSCEEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 99999999999999777788899999 999988 89999999999999988889999999643
No 26
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.59 E-value=2e-15 Score=145.98 Aligned_cols=107 Identities=23% Similarity=0.388 Sum_probs=91.4
Q ss_pred eeEEEEEEEEecCCCCCC-CcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecCC
Q 045478 26 HGDLDLSILEAKSLPNMD-LITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISNC 100 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~s 100 (852)
.|.|.|+|++|++|+.++ ..+. +||||+|.+.. ....||+++.++
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~------------------------------~dpyv~v~l~~~~~~~~~~kT~v~~~t 71 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKR------------------------------SNPYVKTYLLPDKSRQGKRKTSIKRDT 71 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTB------------------------------CCEEEEEEEETCCSGGGEEECCCCSSC
T ss_pred CCEEEEEEEEecCCCCcccCCCC------------------------------CCeEEEEEEEcCCcccCccccccCCCC
Confidence 588999999999999887 3454 89999999963 236899999999
Q ss_pred CCCeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCC
Q 045478 101 ENPFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYG 162 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g 162 (852)
.||.|||+|.|.+... ...+.|+|||.+.++ +++||++.|++.++..+...+.|++|....+
T Consensus 72 ~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 72 VNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp SSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred CCCcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 9999999999998764 346899999999987 8999999999999988878899999965443
No 27
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.59 E-value=9.9e-15 Score=156.69 Aligned_cols=126 Identities=25% Similarity=0.443 Sum_probs=108.7
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC--eeEEEeeeecCCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG--ATVAQTRVISNCEN 102 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~--~~~~rT~vi~~s~n 102 (852)
..|.|.|+|++|++|+++|..+. +||||+|.+.. ....||+++.++.|
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~------------------------------~dpyv~v~~~~~~~~~~~T~~~~~~~n 66 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGT------------------------------SDPYVKVFLLPDKKKKFETKVHRKTLN 66 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSS------------------------------CCEEEEEEEETCTTSCEECCCCCSCSS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCC------------------------------CCeEEEEEEEcCCCceEeCCcccCCCC
Confidence 46899999999999999987766 99999999964 24589999999999
Q ss_pred CeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEEEee
Q 045478 103 PFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQYK 178 (852)
Q Consensus 103 P~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~ 178 (852)
|.|||+|.|.+... ...+.|+|+|.+.++ +++||++.|++.++..+...+.|++|....+......|.|.+.++|.
T Consensus 67 P~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~ 146 (284)
T 2r83_A 67 PVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV 146 (284)
T ss_dssp CEEEEEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE
T ss_pred CeeCceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec
Confidence 99999999998653 467899999999987 89999999999999988889999999765443335678999999998
Q ss_pred ec
Q 045478 179 PI 180 (852)
Q Consensus 179 ~~ 180 (852)
|.
T Consensus 147 p~ 148 (284)
T 2r83_A 147 PT 148 (284)
T ss_dssp TT
T ss_pred Cc
Confidence 64
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=1e-14 Score=139.24 Aligned_cols=102 Identities=19% Similarity=0.295 Sum_probs=88.0
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC---CeeEEEeeeecCCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS---GATVAQTRVISNCEN 102 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~---~~~~~rT~vi~~s~n 102 (852)
.+.|.|+|++|+ ++|..+. +||||+|.+. +....||+++.++.|
T Consensus 25 ~~~L~V~v~~a~---~~d~~g~------------------------------sDPyv~v~l~~~~~~~~~kT~v~~~tln 71 (138)
T 1wfm_A 25 KAELFVTRLEAV---TSNHDGG------------------------------CDCYVQGSVANRTGSVEAQTALKKRQLH 71 (138)
T ss_dssp TTEEEEEEEEEE---CCCCSSC------------------------------CCEEEEEEEEETTEEEEEECCCCCCCSS
T ss_pred CCEEEEEEEEEE---cCCCCCC------------------------------cceEEEEEEEcCCCcccEecccCcCCCC
Confidence 588999999999 4566665 8999999993 344589999999999
Q ss_pred CeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccC
Q 045478 103 PFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGS 160 (852)
Q Consensus 103 P~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~ 160 (852)
|+|||+|.|.+... ...|.|+|+|.|.++ +++||.+.|++.++..+...+.|++|...
T Consensus 72 P~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 72 TTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp EECSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CcCCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 99999999998653 457899999999988 99999999999999877788999999643
No 29
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.58 E-value=1.7e-15 Score=147.57 Aligned_cols=103 Identities=17% Similarity=0.307 Sum_probs=90.7
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC---e--eEEEeeeecCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG---A--TVAQTRVISNC 100 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~---~--~~~rT~vi~~s 100 (852)
.|.|.|+|++|++|+++|..+. +||||++++.. . ...||++++++
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~------------------------------sDPyVkv~l~~~~~~~~~~~kT~v~~~t 91 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQD------------------------------QKVNIRVAVLPCSESTTCLFRTRPLDAS 91 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCC------------------------------SEEEEEEEEESCSCHHHHEEECCCEECC
T ss_pred CCEEEEEEEEccCcCCcccCCC------------------------------CCEEEEEEEecCCCCCccceeCCcCCCC
Confidence 5889999999999999987776 99999999965 2 35899999999
Q ss_pred CCCeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceecc-CCCceeeeeeec
Q 045478 101 ENPFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKIL-CGNEVDDWFPIA 158 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~-~g~~~~~w~~L~ 158 (852)
.||+|||+|.|.+... ...+.|+|||.|.++ +++||.+.|++.++. .+....+||+|+
T Consensus 92 lnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 92 DTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp SSEEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999998653 457899999999988 899999999999996 467788999984
No 30
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=6.8e-16 Score=148.03 Aligned_cols=106 Identities=25% Similarity=0.398 Sum_probs=92.6
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCe-------------e
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGA-------------T 90 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~-------------~ 90 (852)
+..|.|.|+|++|++|++++..+. +||||+|.+.+. .
T Consensus 15 y~~~~L~V~v~~a~~L~~~d~~g~------------------------------~Dpyv~v~~~~~~~~~~~~~~~~~~~ 64 (142)
T 1rh8_A 15 YDLGNLIIHILQARNLVPRDNNGY------------------------------SDPFVKVYLLPGRGQVMVVQNASAEY 64 (142)
T ss_dssp EETTEEEEEEEEEESCCCCSSSSC------------------------------SCCEEEEEETTSSCCCEECCCCCHHH
T ss_pred EcCCEEEEEEEEecCCCCCCCCCC------------------------------CCceEEEEEecCCCcccccccccccc
Confidence 347899999999999999987776 899999999763 2
Q ss_pred EEEeeeecCCCCCeeeeEEEEe-ecC---CCceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeecc
Q 045478 91 VAQTRVISNCENPFWDEHFCVP-VAH---SVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAG 159 (852)
Q Consensus 91 ~~rT~vi~~s~nP~WnE~f~~~-~~~---~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~ 159 (852)
..||+++.++.||.|||+|.|. +.. ....+.|+|+|.+.++ +++||.+.|++.++..+...+.||+|..
T Consensus 65 ~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 65 KRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp HTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred eeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 4799999999999999999997 442 3467899999999987 8999999999999988788899999954
No 31
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=6.1e-15 Score=138.83 Aligned_cols=101 Identities=25% Similarity=0.443 Sum_probs=84.2
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC----CeeEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS----GATVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~----~~~~~rT~vi~~s~ 101 (852)
.|.|.|+|++|++|++++..+. +||||++.+. +....||+++.++.
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~------------------------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~ 66 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRP------------------------------RNPYVKIYFLPDRSDKNKRRTKTVKKTL 66 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCC------------------------------BCEEEEEEEESSCSGGGEEECCCCSSBS
T ss_pred CCEEEEEEEEeeCCCCCCCCCC------------------------------CCCEEEEEEecCCCCCcceecccccCCC
Confidence 5889999999999999987776 8999999993 24568999999999
Q ss_pred CCeeeeEEEEeecC----CCceEEEEEEecCCCC---CceeeeEeeeceeccCCCceeeeeee
Q 045478 102 NPFWDEHFCVPVAH----SVVNLEFHVKDNDILG---AELIGVVQIPVEKILCGNEVDDWFPI 157 (852)
Q Consensus 102 nP~WnE~f~~~~~~----~~~~l~~~V~d~d~~~---~~~iG~~~i~l~~l~~g~~~~~w~~L 157 (852)
||.|||+|.|.+.+ ....+.|+|+|.+.++ +++||.+.|++.++.... .++||+|
T Consensus 67 nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 67 EPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp SCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred CCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 99999999999643 2467899999999887 899999999999987544 8899998
No 32
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.58 E-value=3.9e-15 Score=142.74 Aligned_cols=104 Identities=25% Similarity=0.407 Sum_probs=90.9
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISNC 100 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~s 100 (852)
..|.|.|+|++|++|++++..+. +||||+|.+.+ ....||+++.++
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~~~kT~v~~~t 76 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGL------------------------------ADPYVKLHLLPGASKSNKLRTKTLRNT 76 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSC------------------------------CCEEEEEEEESCCSGGGEEECCCCCSC
T ss_pred CCCEEEEEEEEecCCCCCCCCCC------------------------------CCCEEEEEEEcCCCCcceeeCCcCCCC
Confidence 46889999999999999987665 89999999975 356899999999
Q ss_pred CCCeeeeEEEEe-ecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeec
Q 045478 101 ENPFWDEHFCVP-VAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIA 158 (852)
Q Consensus 101 ~nP~WnE~f~~~-~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~ 158 (852)
.||.|||+|.|. +... ...+.|+|||.+.++ +++||.+.|++.++..+.....|++|.
T Consensus 77 ~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 77 RNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp SSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred CCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 999999999998 5432 257899999999988 899999999999999888888888884
No 33
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=7e-15 Score=140.95 Aligned_cols=105 Identities=20% Similarity=0.289 Sum_probs=89.1
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC--e--eEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG--A--TVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~--~--~~~rT~vi~~s~ 101 (852)
.|.|.|+|++|++|++++..+ +||||+|.+.. . ...||+++.++.
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-------------------------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~ 71 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-------------------------------SDPYVRMYLLPDKRRSGRRKTHVSKKTL 71 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-------------------------------CCEEEEEEEESCCCSSSCEECCCCCSCS
T ss_pred CCEEEEEEEEeECCCCCCCCC-------------------------------CCeeEEEEEEcCCCCCCcccCCccCCCC
Confidence 588999999999999887533 69999999942 2 458999999999
Q ss_pred CCeeeeEEEEeecCC---CceEEEEEEecCCCC---CceeeeEeeeceeccCCCceeeeeeeccCC
Q 045478 102 NPFWDEHFCVPVAHS---VVNLEFHVKDNDILG---AELIGVVQIPVEKILCGNEVDDWFPIAGSY 161 (852)
Q Consensus 102 nP~WnE~f~~~~~~~---~~~l~~~V~d~d~~~---~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~ 161 (852)
||+|||+|.|.+... ...|.|+|+|.+.++ +++||.+.|++.++..+...+.|++|....
T Consensus 72 nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 72 NPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp SCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 999999999998642 357899999999875 369999999999998877889999996543
No 34
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.56 E-value=4.4e-15 Score=142.02 Aligned_cols=106 Identities=24% Similarity=0.410 Sum_probs=90.2
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC----CeeEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS----GATVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~----~~~~~rT~vi~~s~ 101 (852)
.+.|.|+|++|++|++++..+. +||||+|.+. .....||+++.++.
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~ 69 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRP------------------------------RNPYVKIYFLPDRSDKNKRRTKTVKKTL 69 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCC------------------------------CCEEEECCCSSCCSSSSCCBCCCCSSCS
T ss_pred CCEEEEEEEEccCCCCcCCCCC------------------------------CCCEEEEEEecCCCCCcceeCccccCCC
Confidence 5789999999999999987776 8999999993 23458999999999
Q ss_pred CCeeeeEEEEeecC----CCceEEEEEEecCCCC---CceeeeEeeeceeccCCCceeeeeeeccCCC
Q 045478 102 NPFWDEHFCVPVAH----SVVNLEFHVKDNDILG---AELIGVVQIPVEKILCGNEVDDWFPIAGSYG 162 (852)
Q Consensus 102 nP~WnE~f~~~~~~----~~~~l~~~V~d~d~~~---~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g 162 (852)
||+|||+|.|.+.+ ....+.|+|+|.+.++ +++||.+.|++.++.... .+.||+|.....
T Consensus 70 nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~ 136 (141)
T 1v27_A 70 EPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDS 136 (141)
T ss_dssp SCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSS
T ss_pred CCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccccc
Confidence 99999999999533 2367899999999887 789999999999987544 889999976543
No 35
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.56 E-value=1.3e-14 Score=141.09 Aligned_cols=107 Identities=26% Similarity=0.460 Sum_probs=90.5
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecC
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISN 99 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~ 99 (852)
.-.|.|.|+|++|++|+.++ .+. +||||+|.+.. ....||+++.+
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~------------------------------~Dpyv~v~l~~~~~~~~~~kT~v~~~ 72 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGT------------------------------CDPYVKISLIPEDSRLRHQKTQTVPD 72 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSC------------------------------CCEEEEEEEESCSCCTTCEECCCCTT
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCC------------------------------CCEEEEEEEEcCCCCccEEeccccCC
Confidence 34688999999999999988 454 89999999942 24589999999
Q ss_pred CCCCeeeeEEEEeec--CCCceEEEEEEecCCCC--CceeeeEeeeceeccC-CCceeeeeeeccCC
Q 045478 100 CENPFWDEHFCVPVA--HSVVNLEFHVKDNDILG--AELIGVVQIPVEKILC-GNEVDDWFPIAGSY 161 (852)
Q Consensus 100 s~nP~WnE~f~~~~~--~~~~~l~~~V~d~d~~~--~~~iG~~~i~l~~l~~-g~~~~~w~~L~~~~ 161 (852)
+.||.|||+|.|.+. .....+.|+|||.+.++ +++||.+.|++.++.. +...++||+|....
T Consensus 73 t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 73 CRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred CCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 999999999999983 34456999999999874 7999999999999984 78889999997643
No 36
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.56 E-value=4.2e-15 Score=141.57 Aligned_cols=107 Identities=23% Similarity=0.361 Sum_probs=91.2
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~s~ 101 (852)
.|.|.|+|++|++|+.++..+. +||||+|.+.+ ....||+++.++.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~------------------------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~ 64 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGT------------------------------SDPYVKVWLMYKDKRVEKKKTVTKKRNL 64 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTB------------------------------CCEEEEEEEEETTEEEEEEECCCCSSCS
T ss_pred CCeEEEEEEEeeCCCCcCCCCC------------------------------cCeEEEEEEEeCCCccceEeCccccCCC
Confidence 5889999999999999887766 89999999964 2468999999999
Q ss_pred CCeeeeEEEEeecCCC---ceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCC
Q 045478 102 NPFWDEHFCVPVAHSV---VNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKN 164 (852)
Q Consensus 102 nP~WnE~f~~~~~~~~---~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~ 164 (852)
||.|||+|.|.+.... ..+.|+|+|.+.++ +++||.+.|++.++. ...++|++|+...+++
T Consensus 65 nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~~~~~~~ 129 (138)
T 3n5a_A 65 NPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP--GEVKHWKDMIARPRQP 129 (138)
T ss_dssp SCEEEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH--HHHHHHHHHHHSTTCC
T ss_pred CCcCcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCC--hHHHHHHHHHhCCCCe
Confidence 9999999999987654 57899999999987 899999999998743 4467888887766654
No 37
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.55 E-value=1.8e-14 Score=137.51 Aligned_cols=104 Identities=26% Similarity=0.366 Sum_probs=88.1
Q ss_pred eeeEEEEEEEEecCCCCCCCc-chhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC--eeEEEeeeecCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLI-TESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG--ATVAQTRVISNCE 101 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~--~~~~rT~vi~~s~ 101 (852)
..+.|.|+|++|++|++++.+ +. +||||+|.+.. ....||+++.++.
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~------------------------------~dpyv~v~~~~~~~~~~kT~v~~~t~ 69 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMT------------------------------SDPYIKMTILPEKKHKVKTRVLRKTL 69 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTB------------------------------CEEEEEEEEETTTCSEEECCCCSSCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCC------------------------------CCCEEEEEEecCCCceEecCcCcCCC
Confidence 468899999999999999875 54 89999999963 3568999999999
Q ss_pred CCeeeeEEEEe-ecC---CCceEEEEEEecCCCC-CceeeeEeeeceeccCCCc-eeeeeeec
Q 045478 102 NPFWDEHFCVP-VAH---SVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNE-VDDWFPIA 158 (852)
Q Consensus 102 nP~WnE~f~~~-~~~---~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~-~~~w~~L~ 158 (852)
||+|||+|.|. +.. ....+.|+|+|.+.++ +++||.+.|++.++..+.. ...|++|.
T Consensus 70 nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 70 DPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp SCEEEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred CCcEeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 99999999996 554 2357899999999987 8999999999999987644 45678884
No 38
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.54 E-value=4.2e-15 Score=153.59 Aligned_cols=154 Identities=14% Similarity=0.127 Sum_probs=107.3
Q ss_pred cchhhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCcccccccc
Q 045478 236 FRHGQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFI 315 (852)
Q Consensus 236 y~~~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~ 315 (852)
|.+.+.++.|+++|++|+++|+|+.|.|.. ..|.++|++||+|||+||||+ |..++...
T Consensus 54 ~~~~~~~~~ii~~I~~A~~sI~i~~Y~~~~-----------------~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~--- 112 (220)
T 4gel_A 54 HCSLRNVAKIVEQIDRAVYSIDLAIYTFTS-----------------LFLADSIKRALQRGVIIRIIS-DGEMVYSK--- 112 (220)
T ss_dssp TCHHHHHHHHHHHHHTCSSEEEEECSCBCC-----------------HHHHHHHHHHHHHTCEEEEEC-CTTTTTST---
T ss_pred cCcHHHHHHHHHHHHHhhhEEEEEEEEeCC-----------------HHHHHHHHHHHHcCCeEEEEE-echhhhhh---
Confidence 445788999999999999999999987632 589999999999999999997 87654321
Q ss_pred cccccccCCcHHHHhhhcCCCCEEEecCCCCC--Ccchhhhh--ccccccccCccceEEecCCCCCCCCceEEEEcccCC
Q 045478 316 KTEGVMQTHDEETRKFFKHSSVNCVLAPRYAS--NKLSIFKQ--QVVGTLFTHHQKCVIVDTPASGNNRKISAFIGGLDL 391 (852)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~--~~~~~~~~--~~~~~~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl 391 (852)
......+...++.+........ .+..++.. ...+.+.++|.|++|+|+. ++++||.|+
T Consensus 113 ----------~~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~--------~v~~GS~N~ 174 (220)
T 4gel_A 113 ----------GSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYS--------IVISGSVNW 174 (220)
T ss_dssp ----------TCHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCC--------EEEEESCCB
T ss_pred ----------HHHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccccccc--------eEEecCccc
Confidence 1122334445555543221110 00000000 0112345788888888888 999999998
Q ss_pred CCCccCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeChHHHHHHHHHHHHHhhhhh
Q 045478 392 CDGRYDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGPAAYDILINFEQRWRRSTK 459 (852)
Q Consensus 392 ~~~r~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gpaa~dl~~~F~~rW~~~~~ 459 (852)
+. +.. ...|.|+.+...|++|..+.+.|.+.|+....
T Consensus 175 t~-~s~------------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~~ 211 (220)
T 4gel_A 175 TA-LGL------------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFAK 211 (220)
T ss_dssp SH-HHH------------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSEE
T ss_pred cc-ccc------------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhccC
Confidence 76 211 13678898888999999999999999986443
No 39
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=7.9e-15 Score=141.51 Aligned_cols=109 Identities=27% Similarity=0.412 Sum_probs=88.2
Q ss_pred eeEEEEEEEEecCCCCC-CCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC--eeEEEeeeecCCCC
Q 045478 26 HGDLDLSILEAKSLPNM-DLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG--ATVAQTRVISNCEN 102 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~--~~~~rT~vi~~s~n 102 (852)
.|.|.|+|++|++|++. +..+. +.. ...+||||+|.+.. ....||+++.++.|
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~--~~~----------------------~~~~dpyv~v~l~~~~~~~~kT~v~~~t~n 80 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGS--RQD----------------------MAHSNPYVKICLLPDQKNSKQTGVKRKTQK 80 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCS--SCT----------------------TCCCCCEEEEEEETCCSSCEECCCCCSCSS
T ss_pred CCEEEEEEEEEeCCCCccccccc--ccc----------------------CCCCCcEEEEEEEeCCCcceEeecccCCCC
Confidence 58999999999999983 43321 000 01289999999963 34589999999999
Q ss_pred CeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeec
Q 045478 103 PFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIA 158 (852)
Q Consensus 103 P~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~ 158 (852)
|+|||+|.|.+... ...|.|+|+|.+.++ +++||.+.|++.++..+.....|++|.
T Consensus 81 P~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 81 PVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp CCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred CeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 99999999998652 357899999999988 889999999999998777778899884
No 40
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.54 E-value=3.5e-14 Score=139.95 Aligned_cols=106 Identities=25% Similarity=0.386 Sum_probs=89.4
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~s~ 101 (852)
.|.|.|+|++|++|++++.++. +||||+|.+.+ ....||+++.++.
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~------------------------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~ 85 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGY------------------------------SDPFVKLWLKPDMGKKAKHKTQIKKKTL 85 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEEETC---CCEEECCCCCSCS
T ss_pred CCEEEEEEEEeECCCCccCCCC------------------------------CCcEEEEEEECCCCccceEeCCcccCCC
Confidence 5889999999999999987766 89999999975 2568999999999
Q ss_pred CCeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCC
Q 045478 102 NPFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGK 163 (852)
Q Consensus 102 nP~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~ 163 (852)
||.|||+|.|.+... ...+.|+|+|.+.++ +++||.+.|++.++. ...+.|++|+...++
T Consensus 86 nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 86 NPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKDK 149 (166)
T ss_dssp SCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTTC
T ss_pred CCcccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHhCCCC
Confidence 999999999998653 457899999999988 899999999998763 345667777655443
No 41
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.53 E-value=3.2e-14 Score=139.13 Aligned_cols=104 Identities=30% Similarity=0.457 Sum_probs=86.6
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeecCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVISNC 100 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~~s 100 (852)
..|.|.|+|++|++|++++..+. +||||+|.+.. ....||+++.++
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------~dpyv~v~l~~~~~~~~~~kT~v~~~t 72 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGL------------------------------SDPYVKIHLMQNGKRLKKKKTTIKKNT 72 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred CCCEEEEEEEEeeCCCCccCCCC------------------------------CCeEEEEEEEeCCceeceeeCceecCC
Confidence 36899999999999999987766 89999999953 246899999999
Q ss_pred CCCeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceecc------------CCCceeeeeeec
Q 045478 101 ENPFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKIL------------CGNEVDDWFPIA 158 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~------------~g~~~~~w~~L~ 158 (852)
.||.|||+|.|.+... ...+.|+|+|.+.++ +++||.+.|++..+. .+..++.|++|.
T Consensus 73 ~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~ 146 (159)
T 1tjx_A 73 LNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQ 146 (159)
T ss_dssp SSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred CCCcccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECc
Confidence 9999999999998654 356899999999988 999999999998541 244556677664
No 42
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.48 E-value=1.2e-13 Score=134.28 Aligned_cols=118 Identities=19% Similarity=0.183 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHhccceEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCchh
Q 045478 545 KSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEGNPNSAA 624 (852)
Q Consensus 545 ~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg~~~~~~ 624 (852)
.++.++++++|.+|+++|+|+++||.. ..+..++.++.+ +||+|+||++..+. ..
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~~~------------------~~i~~aL~~a~~--rGV~Vril~~~~~~----~~- 67 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSFTA------------------PDIMKALVAAKK--RGVDVKIVIDERGN----TG- 67 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSBCC------------------HHHHHHHHHHHH--TTCEEEEEEESTTC----CS-
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEeCC------------------HHHHHHHHHHHH--CCCEEEEEEeCccc----cc-
Confidence 468889999999999999999998841 235556666643 77999999995421 10
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhcceeEEEEe
Q 045478 625 VQEILYWQGQTMSMMYKIVAQALQDNGLSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFMIYVHA 704 (852)
Q Consensus 625 ~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyvHS 704 (852)
+..+ ...+.|.+.|++++ ++. + ...+|+
T Consensus 68 ------~~~~-------~~~~~L~~~gv~v~--------~~~------------~-------------------~~~~H~ 95 (155)
T 1byr_A 68 ------RASI-------AAMNYIANSGIPLR--------TDS------------N-------------------FPIQHD 95 (155)
T ss_dssp ------HHHH-------HHHHHHHHTTCCEE--------EEC------------S-------------------SSCCCC
T ss_pred ------cccH-------HHHHHHHHCCCeEE--------EcC------------C-------------------cccccc
Confidence 1111 23677888998752 211 0 126899
Q ss_pred eEEEEcceeEEecCcCcccCCCCCCCCceeEEEEecC
Q 045478 705 KGMIVDDEYVIMGSANINQRSLEGSRDTEIAMGAYQP 741 (852)
Q Consensus 705 KlmIVDD~~~iIGSANln~RSm~~n~DsEi~v~i~d~ 741 (852)
|++||||+++++||+||+.||+..| .|+++.+.++
T Consensus 96 K~~iiD~~~~~iGS~N~~~~~~~~n--~E~~~~i~~~ 130 (155)
T 1byr_A 96 KVIIVDNVTVETGSFNFTKAAETKN--SENAVVIWNM 130 (155)
T ss_dssp CEEEETTTEEEEESCCBSHHHHHTS--CEEEEEEESC
T ss_pred eEEEECCCEEEEECCCCCccccccC--cccEEEEcCc
Confidence 9999999999999999999999855 9999999884
No 43
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.46 E-value=3.3e-13 Score=145.87 Aligned_cols=124 Identities=28% Similarity=0.352 Sum_probs=100.7
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC--CeeEEEeeeecCCCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS--GATVAQTRVISNCEN 102 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~--~~~~~rT~vi~~s~n 102 (852)
-.|.|.|+|++|++|+++|..+. +||||+|.+. +....||+++.++.|
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~------------------------------~dPyv~v~l~~~~~~~~kT~v~~~t~n 67 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGF------------------------------SDPYVKIYLLPDRKKKFQTKVHRKTLN 67 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSC------------------------------CCEEEEEECTTSTTSCEECCCCCSCSS
T ss_pred CCCEEEEEEEEeECCCCcCCCCC------------------------------cCeEEEEEEEcCCCeeEeCCccCCCCC
Confidence 35889999999999999988776 9999999993 345589999999999
Q ss_pred CeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeee-ceeccC-CCceeeeeeeccCCCCCCCCCCEEEEEEE
Q 045478 103 PFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIP-VEKILC-GNEVDDWFPIAGSYGKNLKPFPQLHVSMQ 176 (852)
Q Consensus 103 P~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~-l~~l~~-g~~~~~w~~L~~~~g~~~k~~g~l~l~l~ 176 (852)
|.|||+|.|.+... ...+.|+|+|.|.++ +++||.+.|+ +.++.. +...+.|++|....+. ....|+|.+.+.
T Consensus 68 P~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~-~~~~G~i~vsl~ 146 (296)
T 1dqv_A 68 PIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSE-KADLGELNFSLC 146 (296)
T ss_dssp CEEEEEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSC-CSCCCEEEEEEE
T ss_pred CcEeeEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeecccccccc-ccccceEEEEEE
Confidence 99999999998643 347899999999988 9999999996 444443 4456789999654432 245789999999
Q ss_pred eee
Q 045478 177 YKP 179 (852)
Q Consensus 177 f~~ 179 (852)
|.|
T Consensus 147 y~~ 149 (296)
T 1dqv_A 147 YLP 149 (296)
T ss_dssp EET
T ss_pred ecc
Confidence 865
No 44
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.45 E-value=2.7e-13 Score=126.93 Aligned_cols=116 Identities=20% Similarity=0.261 Sum_probs=103.0
Q ss_pred EEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeec-CCCCCeee
Q 045478 28 DLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVIS-NCENPFWD 106 (852)
Q Consensus 28 ~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~-~s~nP~Wn 106 (852)
-|.|+|.+|.+|+. + +|||+++.+-+.+ .+||++. ++.||+||
T Consensus 22 sL~V~l~~a~~Lpg-----~------------------------------~Dp~akv~FRg~k-~kTkvi~~~~~npvfn 65 (144)
T 3l9b_A 22 ALIVHLKTVSELRG-----R------------------------------ADRIAKVTFRGQS-FYSRVLENCEDVADFD 65 (144)
T ss_dssp EEEEEEEEEESCCS-----C------------------------------EEEEEEEEETTEE-EECCCEEEECSCEEEE
T ss_pred EEEEEEEEecCCCC-----C------------------------------CCCeEEEEEeccc-eeeEEeccCCCCceEc
Confidence 49999999999993 2 8999999998777 8999998 69999999
Q ss_pred eEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEEEeeecC
Q 045478 107 EHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQYKPIG 181 (852)
Q Consensus 107 E~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~~~~ 181 (852)
|.|.|++..+ ...|+|.|+|.+.++ +.+||++.++|.++..++....+-+|++.++++. ++.|.++|+|.|.+
T Consensus 66 E~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~--~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 66 ETFRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAII--KTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEE--EEEEEEEEEEEETT
T ss_pred ceEEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCcc--ccEEEEEEEecCCC
Confidence 9999998763 467899999999988 9999999999999998888888899999988874 48999999999854
No 45
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.45 E-value=7.5e-13 Score=125.08 Aligned_cols=86 Identities=21% Similarity=0.308 Sum_probs=71.7
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeec-CCCCCe
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVIS-NCENPF 104 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~-~s~nP~ 104 (852)
-|.|.|+|++|++|+. .+. +||||+|. . .. .||+++. ++.||.
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~------------------------------~DPYv~v~-~-~~-~kt~~~~~~t~nP~ 47 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEK------------------------------FNTYVTLK-V-QN-VKSTTIAVRGSQPS 47 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGG------------------------------CEEEEEEE-E-TT-EEEECCCEESSSCE
T ss_pred ceEEEEEEEEeECCCC---CCC------------------------------cCeEEEEE-e-cC-EEEeEecCCCCCce
Confidence 3789999999998852 344 89999999 2 22 4666665 699999
Q ss_pred eeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccCC
Q 045478 105 WDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILCG 148 (852)
Q Consensus 105 WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g 148 (852)
|||+|.|.+......+.|+|+|+| ++ |++||++.||+.++...
T Consensus 48 WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 48 WEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBC
T ss_pred ECCEEEEEEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhc
Confidence 999999999887778999999999 66 99999999999998643
No 46
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.45 E-value=8.5e-14 Score=140.98 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHhccceEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCchh
Q 045478 545 KSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEGNPNSAA 624 (852)
Q Consensus 545 ~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg~~~~~~ 624 (852)
.+....++++|++||++|+|+..+|.. ..++.+|.+|. .+||+|+||+.......
T Consensus 45 ~~~~~~ll~~I~~A~~sI~i~~y~~~~------------------~~i~~aL~~aa--~rGV~Vrii~D~~~~~~----- 99 (196)
T 4ggj_A 45 ESSLSRLLRALLAARSSLELCLFAFSS------------------PQLGRAVQLLH--QRGVRVRVITDCDYMAL----- 99 (196)
T ss_dssp CCHHHHHHHHHHTCSSEEEEEESCBCC------------------HHHHHHHHHHH--HTTCEEEEEESSCCC-------
T ss_pred HHHHHHHHHHHHHhheEEEEEEEEeCC------------------HHHHHHHHHHH--HcCCcEEEEEecccccc-----
Confidence 345678999999999999999844431 24566666663 47899999997421100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhcceeEEEEe
Q 045478 625 VQEILYWQGQTMSMMYKIVAQALQDNGLSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFMIYVHA 704 (852)
Q Consensus 625 ~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyvHS 704 (852)
.. ..++.|.++|++++ ++ .+ ..++|+
T Consensus 100 --------~~-------~~~~~l~~~gi~v~--------~~------------~~-------------------~~~~H~ 125 (196)
T 4ggj_A 100 --------NG-------SQIGLLRKAGIQVR--------HD------------QD-------------------LGYMHH 125 (196)
T ss_dssp ---------C-------CHHHHHHHTTCEEE--------EC------------CS-------------------SSCCCC
T ss_pred --------cH-------HHHHHHHhcCCCcc--------cc------------cc-------------------cccccC
Confidence 00 11467888998752 11 10 136799
Q ss_pred eEEEEcceeEEecCcCcccCCCCCCCCceeEEEEecCccc
Q 045478 705 KGMIVDDEYVIMGSANINQRSLEGSRDTEIAMGAYQPHYT 744 (852)
Q Consensus 705 KlmIVDD~~~iIGSANln~RSm~~n~DsEi~v~i~d~~~~ 744 (852)
|+||||++++++||+||+.+|+..| .|..++++|+..+
T Consensus 126 K~~viD~~~~~~GS~N~t~~~~~~n--~E~~~~i~~~~~~ 163 (196)
T 4ggj_A 126 KFAIVDKKVLITGSLNWTTQAIQNN--RENVLIMEDTEYV 163 (196)
T ss_dssp EEEEETTTEEEEESCCBCHHHHHHC--CEEEEEECCHHHH
T ss_pred cEEEEcceEEEecCccCChhhhccc--ceeEEEEECHHHH
Confidence 9999999999999999999999866 9999999887543
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.41 E-value=2.5e-14 Score=164.66 Aligned_cols=126 Identities=26% Similarity=0.507 Sum_probs=25.2
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCC---
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNC--- 100 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s--- 100 (852)
...|.|+|+|++|++|+++ .||||++.+++...+||+++.++
T Consensus 8 r~~~~L~V~VieAk~L~~~-----------------------------------ddpYv~v~l~~~~~~kT~v~~kt~~g 52 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPK-----------------------------------KRYYCELCLDDMLYARTTSKPRSASG 52 (483)
T ss_dssp EEEECC--------------------------------------------------------------------------
T ss_pred eeccEEEEEEEEcCCcCCC-----------------------------------CCCeEEEEECCeEEeeeeEEeCCCCC
Confidence 4678999999999999864 48999999998877899999999
Q ss_pred CCCeeeeEEEEeecCCCceEEEEEEec-C---CCC-CceeeeEeeeceeccCCCceeeeeeeccCCC-------------
Q 045478 101 ENPFWDEHFCVPVAHSVVNLEFHVKDN-D---ILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYG------------- 162 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~~~~l~~~V~d~-d---~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g------------- 162 (852)
.||+|||+|.|.+.+....+.|+|||+ + ..+ +++||++.||+.++..|...+.|++|.++.+
T Consensus 53 lnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~ 132 (483)
T 3bxj_A 53 DTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGG 132 (483)
T ss_dssp ------CCEECC------------------------------------------CCEECC--------------------
T ss_pred CCCccccEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccc
Confidence 999999999999776677889999994 4 244 8999999999999998888999999976543
Q ss_pred --------CCCCCCCEEEEEEEeeecCCcc
Q 045478 163 --------KNLKPFPQLHVSMQYKPIGQIP 184 (852)
Q Consensus 163 --------~~~k~~g~l~l~l~f~~~~~~~ 184 (852)
+..+..|.|+|+++|.+....|
T Consensus 133 ~~~~~~~~~~~~~~G~lrL~v~~~~~~vlP 162 (483)
T 3bxj_A 133 GSGGGSGGKGKGGCPAVRLKARYQTMSILP 162 (483)
T ss_dssp ------------------CEEEEEECCBCC
T ss_pred cccccccccCCCCCceEEEEEEeeeeeecc
Confidence 1123468999999998865443
No 48
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.40 E-value=1.2e-12 Score=152.30 Aligned_cols=115 Identities=23% Similarity=0.358 Sum_probs=98.6
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCCCee
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCENPFW 105 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~nP~W 105 (852)
.|+|.|+|++|++|+++|.++. +||||+|.+++.. .||+++.++.||.|
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~------------------------------sdpyv~v~~~~~~-~~T~~~~~t~nP~w 434 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGK------------------------------SNPYCEISMGSQS-YTTRTIQDTLNPKW 434 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEETTEE-EECCCCSSCSSCEE
T ss_pred CceEEEEeceeecCCCCCCCCC------------------------------CCeEEEEEECCee-ccCCccCCCCCCcc
Confidence 5789999999999999998776 9999999998765 89999999999999
Q ss_pred eeEEEEeecCCC-ceEEEEEEecCCCC-CceeeeEeeeceeccCCCc----eeeeeeeccCCCCCCCCCCEEEEEEEe
Q 045478 106 DEHFCVPVAHSV-VNLEFHVKDNDILG-AELIGVVQIPVEKILCGNE----VDDWFPIAGSYGKNLKPFPQLHVSMQY 177 (852)
Q Consensus 106 nE~f~~~~~~~~-~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~----~~~w~~L~~~~g~~~k~~g~l~l~l~f 177 (852)
||+|.|.+.... ..+.|+|||.|.++ +++||.+.+++.++..+.. ...|+++.+ +..|+|++++++
T Consensus 435 ~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------~~~G~i~l~~~l 506 (510)
T 3jzy_A 435 NFNCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------VPTGEVWVRFDL 506 (510)
T ss_dssp EEEEEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------SSSCEEEEEEEE
T ss_pred CceEEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCC------CCCceEEEEEEE
Confidence 999999987654 56899999999988 9999999999999986544 778999842 235777766654
No 49
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.39 E-value=1.4e-12 Score=154.06 Aligned_cols=120 Identities=27% Similarity=0.381 Sum_probs=102.2
Q ss_pred eeeEEEEEEEEecCCCCCCC--cchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC----eeEEEeeeec
Q 045478 25 LHGDLDLSILEAKSLPNMDL--ITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG----ATVAQTRVIS 98 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~----~~~~rT~vi~ 98 (852)
..++|.|+|++|++|+.++. .+. +||||+|.+.+ ....||+++.
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~------------------------------~DPYV~V~l~g~~~d~~~~kTkvi~ 544 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSI------------------------------VDPKVIVEIHGVGRDTGSRQTAVIT 544 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSC------------------------------CCEEEEEEEESSGGGCEEEECCCCT
T ss_pred cceEEEEEEEEcCCCCcccccccCC------------------------------CCcEEEEEEecCCCCcceeeccccc
Confidence 46889999999999998874 333 89999999954 2458999999
Q ss_pred CC-CCCeeeeEEEEeecCCC-ceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEE
Q 045478 99 NC-ENPFWDEHFCVPVAHSV-VNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSM 175 (852)
Q Consensus 99 ~s-~nP~WnE~f~~~~~~~~-~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l 175 (852)
++ .||+|||+|.|.+..+. ..|.|+|+|+|.++ +++||++.||+..|..|. +|++|.+..|++. ..+.|.|.+
T Consensus 545 ~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~-~~~~L~v~i 620 (624)
T 1djx_A 545 NNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH-PSATLFVKI 620 (624)
T ss_dssp TCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE-EEEEEEEEE
T ss_pred CCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC-CceEEEEEE
Confidence 97 99999999999998754 67899999999987 999999999999998774 6999998888763 467888888
Q ss_pred Eee
Q 045478 176 QYK 178 (852)
Q Consensus 176 ~f~ 178 (852)
+|.
T Consensus 621 ~~~ 623 (624)
T 1djx_A 621 SIQ 623 (624)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 50
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.36 E-value=2.5e-12 Score=148.66 Aligned_cols=108 Identities=22% Similarity=0.253 Sum_probs=92.5
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeecCCCCCee
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVISNCENPFW 105 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~~s~nP~W 105 (852)
-|.|.|+|++|++|+. |.+++ +||||+|.+++.. .||+++.++.||+|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~------------------------------sDPYV~v~l~~~~-~kTkvik~tlNP~W 440 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTA------------------------------TDAYLKVFFGGQE-FRTGVVWNNNNPRW 440 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSC------------------------------CCEEEEEEETTEE-EECCCBCSCSSCBC
T ss_pred ccEEEEEEEEccCCCc-ccCCC------------------------------cCeEEEEEECCEe-eeeeeecCCCCCCC
Confidence 4789999999999998 88877 9999999999876 99999999999999
Q ss_pred eeEEEEeecC--CCceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEEEee
Q 045478 106 DEHFCVPVAH--SVVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQYK 178 (852)
Q Consensus 106 nE~f~~~~~~--~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~ 178 (852)
||+|.|.+.. ....|.|+|||.|..+ +++||++.+++. .|. .+.|++| ..|.|+++++.+
T Consensus 441 ne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g~-~~~~~~l---------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 441 TDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SGF-HEVTCEL---------NHGRVKFSYHAK 503 (540)
T ss_dssp CCCEEEEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SEE-EEEEEEC---------SSSEEEEEEEEE
T ss_pred CeEEEEEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CCc-EEEEEEc---------CCeEEEEEEEEE
Confidence 9999998643 5677899999999987 799999999987 343 6788886 136888877644
No 51
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.36 E-value=3.2e-12 Score=125.86 Aligned_cols=85 Identities=21% Similarity=0.305 Sum_probs=71.8
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCeeEEEeeeec-CCCCCe
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGATVAQTRVIS-NCENPF 104 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~~~~rT~vi~-~s~nP~ 104 (852)
.|.|.|+|++|++|+ ..+. +||||+|. . .. .||+++. ++.||+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~------------------------------~DPYV~v~-~-~~-~kt~~~~~~t~nP~ 56 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEK------------------------------FNTYVTLK-V-QN-VESTTIAVRGSQPS 56 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGG------------------------------CEEEEEEE-E-TT-EEEECCCEESSSCE
T ss_pred eEEEEEEEEEEECCC---CCCC------------------------------CCeEEEEE-e-cc-eEEEEecCCCCCCC
Confidence 478999999999885 2344 89999999 2 22 4777775 599999
Q ss_pred eeeEEEEeecCCCceEEEEEEecCCCC-CceeeeEeeeceeccC
Q 045478 105 WDEHFCVPVAHSVVNLEFHVKDNDILG-AELIGVVQIPVEKILC 147 (852)
Q Consensus 105 WnE~f~~~~~~~~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~ 147 (852)
|||+|.|.+......+.|+|+|+| ++ |++||++.||+.++..
T Consensus 57 WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 57 WEQDFMFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEECCCTTSEEEEEEEECC-SSCCEEEEEEEEEGGGSCB
T ss_pred CCCEEEEEeeCCCCEEEEEEEECC-CCCCceEEEEEEEHHHhcc
Confidence 999999999887778999999999 65 9999999999999864
No 52
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.29 E-value=1e-11 Score=133.02 Aligned_cols=90 Identities=34% Similarity=0.520 Sum_probs=78.6
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC--Ce--eEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS--GA--TVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~--~~--~~~rT~vi~~s~ 101 (852)
.|.|.|+|++|++|++++.++. +||||+|.+. +. ...||+++.++.
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~------------------------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~ 198 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGL------------------------------SDPYVKIHLMQNGKRLKKKKTTIKKNTL 198 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC------------------------------CCEEEEEEEEETTEEEEEEECCCCCSCS
T ss_pred CCceEEEEEEeECCCCcCCCCC------------------------------cCeEEEEEEEeCCcEeeeeccceecCCC
Confidence 4789999999999999987776 8999999984 32 458999999999
Q ss_pred CCeeeeEEEEeecCC---CceEEEEEEecCCCC-CceeeeEeeeceec
Q 045478 102 NPFWDEHFCVPVAHS---VVNLEFHVKDNDILG-AELIGVVQIPVEKI 145 (852)
Q Consensus 102 nP~WnE~f~~~~~~~---~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l 145 (852)
||.|||+|.|.+... ...+.|+|+|.+.++ +++||.+.|++..+
T Consensus 199 nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 199 NPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp SCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCC
T ss_pred CCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 999999999998754 346899999999988 99999999999763
No 53
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.29 E-value=5.1e-12 Score=150.36 Aligned_cols=104 Identities=22% Similarity=0.375 Sum_probs=92.8
Q ss_pred eeeEEEEEEEEecCCCC---CCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC--eeEEEeeeecC
Q 045478 25 LHGDLDLSILEAKSLPN---MDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG--ATVAQTRVISN 99 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~--~~~~rT~vi~~ 99 (852)
..|.|.|+|++|++|++ +|..+. +||||+|.+.+ ....||+++.+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~------------------------------sDPYV~V~l~~~~~~k~kTkvik~ 65 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDT------------------------------PDPYVELFISTTPDSRKRTRHFNN 65 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCC------------------------------CCEEEEEECTTSTTCCEECCCCTT
T ss_pred CccEEEEEEEEEECCCCccccCCCCC------------------------------cCeEEEEEEecCCCCeEecceEcC
Confidence 46899999999999998 776655 89999999985 34589999999
Q ss_pred CCCCeeeeEEEEeecC-CCceEEEEEEecCCCCCceeeeEeeeceeccCCCceeeeeeec
Q 045478 100 CENPFWDEHFCVPVAH-SVVNLEFHVKDNDILGAELIGVVQIPVEKILCGNEVDDWFPIA 158 (852)
Q Consensus 100 s~nP~WnE~f~~~~~~-~~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~~g~~~~~w~~L~ 158 (852)
+.||+|||+|.|.+.. ....++|+|+|+|.+++++||++.|++.++..|...+.|++|.
T Consensus 66 tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 66 DINPVWNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CSSCEEEEEEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCCeeeeEEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 9999999999999987 4567899999999988999999999999999898889999993
No 54
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.23 E-value=3.8e-12 Score=137.45 Aligned_cols=108 Identities=31% Similarity=0.447 Sum_probs=88.7
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC--C--eeEEEeeeecCCC
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS--G--ATVAQTRVISNCE 101 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~--~--~~~~rT~vi~~s~ 101 (852)
.|.|.|+|++|++|+++|..+. +||||++++. + ....||+++.++.
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~------------------------------~Dpyv~v~l~~~~~~~~~~kT~v~~~t~ 200 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGF------------------------------SDPYVKASLISEGRRLKKRKTSIKKNTL 200 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSC------------------------------CCEEEEECCCTTCCTTSCEECCCCCSCS
T ss_pred cceeEEEEEEeecCCccCCCCC------------------------------CCcEEEEEEEeCCcCccceecceecCCC
Confidence 4889999999999999998776 8999999996 2 2458999999999
Q ss_pred CCeeeeEEEEeecCCC---ceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCCCCC
Q 045478 102 NPFWDEHFCVPVAHSV---VNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSYGKN 164 (852)
Q Consensus 102 nP~WnE~f~~~~~~~~---~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~ 164 (852)
||.|||+|.|.+.... ..+.|+|+|.+.++ +++||.+.|++..+.. ...++|+.|+...+++
T Consensus 201 nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~ 266 (296)
T 1dqv_A 201 NPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKP 266 (296)
T ss_dssp SCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSC
T ss_pred CCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCc
Confidence 9999999999987642 46899999999998 8999999999987632 1345677766555544
No 55
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.09 E-value=1.7e-10 Score=118.92 Aligned_cols=138 Identities=15% Similarity=0.004 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHhccceEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCchh
Q 045478 545 KSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEGNPNSAA 624 (852)
Q Consensus 545 ~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg~~~~~~ 624 (852)
....+.++++|.+||++|+|+. |+++ + ..++.+|.+|. .+||+|+||+....... ..
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~-Y~~~------~-----------~~I~~aL~~Aa--~RGV~VRii~D~~~~~~--~~- 113 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAI-YTFT------S-----------LFLADSIKRAL--QRGVIIRIISDGEMVYS--KG- 113 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEC-SCBC------C-----------HHHHHHHHHHH--HHTCEEEEECCTTTTTS--TT-
T ss_pred HHHHHHHHHHHHHhhhEEEEEE-EEeC------C-----------HHHHHHHHHHH--HcCCeEEEEEechhhhh--hH-
Confidence 3456678999999999999997 5442 1 24666677764 47799999997432111 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhcceeEEEEe
Q 045478 625 VQEILYWQGQTMSMMYKIVAQALQDNGLSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFMIYVHA 704 (852)
Q Consensus 625 ~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyvHS 704 (852)
. .+..|...|+.+.+... ....|.. +.- -.+..... +.....|.
T Consensus 114 ---------~--------~~~~~~~~~~~~~~~~~------~~~~h~K----~~v----iD~~~~~~-----~~~~~~H~ 157 (220)
T 4gel_A 114 ---------S--------QISMLAQLGVPVRVPIT------TNLMHNK----FCI----IDGFERVE-----EIRLLRKL 157 (220)
T ss_dssp ---------C--------HHHHHHHTTCCEEECCS------SSCBCCC----EEE----ESCHHHHH-----HHHHHTTC
T ss_pred ---------H--------HHHHHHhcCCcEEeecc------cccccce----eEE----Ecchhccc-----ccccccce
Confidence 0 13445566664310000 0000000 000 00000000 00124688
Q ss_pred eEEEEcceeEEecCcCcccCCCCCCCCceeEEEEecCcc
Q 045478 705 KGMIVDDEYVIMGSANINQRSLEGSRDTEIAMGAYQPHY 743 (852)
Q Consensus 705 KlmIVDD~~~iIGSANln~RSm~~n~DsEi~v~i~d~~~ 743 (852)
|++|+|+.++++||+||+.+|+.+| .|..+++.++..
T Consensus 158 K~~v~D~~~v~~GS~N~t~~s~~~N--~E~~~vi~~~~~ 194 (220)
T 4gel_A 158 KFMRPCYSIVISGSVNWTALGLGGN--WENCIITADDKL 194 (220)
T ss_dssp SCCCCCCCEEEEESCCBSHHHHHTS--BEEEEEECCHHH
T ss_pred eccccccceEEecCccccccccccC--ceEEEEEECHHH
Confidence 8888888999999999999999877 999999987754
No 56
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.00 E-value=6e-10 Score=131.64 Aligned_cols=118 Identities=17% Similarity=0.225 Sum_probs=83.8
Q ss_pred HHHHHHHHhccc-----eEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCch
Q 045478 549 SAYVKAIRSAQH-----FIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEGNPNSA 623 (852)
Q Consensus 549 ~ayl~aI~~Ak~-----~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg~~~~~ 623 (852)
++++++|++|++ .|+| ++||++. + ..++.++++|. .+|++|+|+++..+.- +.
T Consensus 350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~-----d-----------~~I~~AL~~AA--~rGV~VrVLvd~~a~~--~~- 407 (687)
T 1xdp_A 350 EHVLELLRQASFDPSVLAIKI-NIYRVAK-----D-----------SRIIDSMIHAA--HNGKKVTVVVELQARF--DE- 407 (687)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE-EESSCCT-----T-----------CHHHHHHHHHH--HTTCEEEEEECTTCSS--TT-
T ss_pred hhHHHHHHHHhhCCcceEEEE-EeeeecC-----c-----------HHHHHHHHHHH--hcCCEEEEEECCCccc--ch-
Confidence 368899999997 9999 8999842 1 13455555553 3789999999975411 10
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhcceeEEEE
Q 045478 624 AVQEILYWQGQTMSMMYKIVAQALQDNGLSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFMIYVH 703 (852)
Q Consensus 624 ~~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyvH 703 (852)
+... ...+.|.++|+++.| +.+ ...+|
T Consensus 408 -------~~n~-------~~~~~L~~aGV~V~~--------------------~~~-------------------~~k~H 434 (687)
T 1xdp_A 408 -------EANI-------HWAKRLTEAGVHVIF--------------------SAP-------------------GLKIH 434 (687)
T ss_dssp -------TTTT-------TTTHHHHHHTCEEEE--------------------CCT-------------------TCEEC
T ss_pred -------hhHH-------HHHHHHHHCCCEEEE--------------------ecC-------------------Ccccc
Confidence 0111 125788899987621 111 13599
Q ss_pred eeEEEEcc----ee---EEecCcCcccCCCCCCCCceeEEEEecCcc
Q 045478 704 AKGMIVDD----EY---VIMGSANINQRSLEGSRDTEIAMGAYQPHY 743 (852)
Q Consensus 704 SKlmIVDD----~~---~iIGSANln~RSm~~n~DsEi~v~i~d~~~ 743 (852)
+|+||||+ ++ ++|||+|+|.||+..+ +|+++.+.++..
T Consensus 435 ~Ki~VID~re~~~i~~~a~iGS~N~d~rs~~~n--~D~~l~i~~~~i 479 (687)
T 1xdp_A 435 AKLFLISRKENGEVVRYAHIGTGNFNEKTARLY--TDYSLLTADARI 479 (687)
T ss_dssp CEEEEEEEEETTEEEEEEEEESSCSCTTGGGTE--EEEEEEECCHHH
T ss_pred ceEEEEEeccCCeEEEEEEEeCCcCCcchhhhc--ceEEEEEeCHHH
Confidence 99999994 44 9999999999999855 999999988754
No 57
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.98 E-value=5.2e-09 Score=96.29 Aligned_cols=90 Identities=19% Similarity=0.341 Sum_probs=78.2
Q ss_pred CCcEEEEEECCeeE---EEe-eeecCCCCCeeeeEEEEeecCCCceEEEEEEecCCCCCceeeeEeeeceecc-----CC
Q 045478 78 SNPYVSVCLSGATV---AQT-RVISNCENPFWDEHFCVPVAHSVVNLEFHVKDNDILGAELIGVVQIPVEKIL-----CG 148 (852)
Q Consensus 78 sdpYv~v~l~~~~~---~rT-~vi~~s~nP~WnE~f~~~~~~~~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~-----~g 148 (852)
.||||.|.++.... ++| ....+|..|.|||+|.-.+. ....+.|.|+++.. +++..+.|++++|. .+
T Consensus 32 lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~ 107 (138)
T 2enj_A 32 VNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKNV---DLISETTVELYSLAERCRKNN 107 (138)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSSC---SCCEEEEEESHHHHHHHHHTT
T ss_pred CCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 79999999998766 888 77777999999999999874 67889999997655 89999999999999 45
Q ss_pred CceeeeeeeccCCCCCCCCCCEEEEEEEeee
Q 045478 149 NEVDDWFPIAGSYGKNLKPFPQLHVSMQYKP 179 (852)
Q Consensus 149 ~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~~ 179 (852)
...+.|++| ++.|+|++.++|+-
T Consensus 108 g~~e~WvdL--------eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 108 GKTEIWLEL--------KPQGRMLMNARYFL 130 (138)
T ss_dssp TCEEEEEEC--------BSSCEEEEEEEECC
T ss_pred CceEEEEec--------ccCcEEEEEEEEEE
Confidence 677999999 57889999999974
No 58
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.98 E-value=1.1e-09 Score=131.66 Aligned_cols=106 Identities=25% Similarity=0.404 Sum_probs=91.3
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEEC----CeeEEEeeeecCC
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLS----GATVAQTRVISNC 100 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~----~~~~~rT~vi~~s 100 (852)
-.+.|.|+|.+|++|+++|.++. +||||++.+. .....||+++.++
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~------------------------------sDPyvkv~l~p~~~~~~k~kT~v~~~t 219 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGL------------------------------SDPYVKLKLIPDPKSESKQKTKTIKSS 219 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSS------------------------------CCEEEEEEEESCSSCCSCEECCCCSSC
T ss_pred ccceeeeeeecccccCCCCcccc------------------------------cCcccccccccCccccccccccccccc
Confidence 36889999999999999998776 9999999983 2245799999999
Q ss_pred CCCeeeeEEEEeecCC--CceEEEEEEecCCCC-CceeeeEeeeceeccCCCceeeeeeeccCC
Q 045478 101 ENPFWDEHFCVPVAHS--VVNLEFHVKDNDILG-AELIGVVQIPVEKILCGNEVDDWFPIAGSY 161 (852)
Q Consensus 101 ~nP~WnE~f~~~~~~~--~~~l~~~V~d~d~~~-~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~ 161 (852)
.||.|||+|.|.+... ...+.|+|||.|..+ +++||.+.+++.++..+. .++|+.|+++.
T Consensus 220 lnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~ 282 (674)
T 3pfq_A 220 LNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQE 282 (674)
T ss_dssp SSCEEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTT
T ss_pred cCCCccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeecccc
Confidence 9999999999998643 356899999999998 999999999999998654 68999997653
No 59
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.96 E-value=7.2e-09 Score=94.18 Aligned_cols=89 Identities=17% Similarity=0.288 Sum_probs=77.0
Q ss_pred CCcEEEEEECCeeEE---Ee-eeecCCCCCeeeeEEEEeecCCCceEEEEEEecCCCCCceeeeEeeeceecc-----CC
Q 045478 78 SNPYVSVCLSGATVA---QT-RVISNCENPFWDEHFCVPVAHSVVNLEFHVKDNDILGAELIGVVQIPVEKIL-----CG 148 (852)
Q Consensus 78 sdpYv~v~l~~~~~~---rT-~vi~~s~nP~WnE~f~~~~~~~~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~-----~g 148 (852)
.||||.|.++....+ +| ....+|..|.|||+|.-.+. ....+.+.|+++.. +++..+.|++++|. .+
T Consensus 27 lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~ 102 (126)
T 1yrk_A 27 NQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNN 102 (126)
T ss_dssp CCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTT
T ss_pred CCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 799999999987655 87 67777999999999999874 67889999997665 89999999999999 45
Q ss_pred CceeeeeeeccCCCCCCCCCCEEEEEEEee
Q 045478 149 NEVDDWFPIAGSYGKNLKPFPQLHVSMQYK 178 (852)
Q Consensus 149 ~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~ 178 (852)
...+.|++| ++.|+|++.++|+
T Consensus 103 g~~e~WvdL--------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 103 GKAEFWLDL--------QPQAKVLMSVQYF 124 (126)
T ss_dssp TEEEEEEEC--------BSSCEEEEEEEEE
T ss_pred CceEEEEec--------ccCcEEEEEEEEe
Confidence 677899999 5788999999986
No 60
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.91 E-value=3.4e-09 Score=127.53 Aligned_cols=115 Identities=22% Similarity=0.430 Sum_probs=92.6
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECCe------eEEEeeeec
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSGA------TVAQTRVIS 98 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~~------~~~rT~vi~ 98 (852)
..++|.|+|++|++|+.. . +||||+|.+.+. ...||+++.
T Consensus 648 ~~~~L~V~Visaq~L~~~----~------------------------------~DPYV~V~l~g~p~d~~~~k~kTkvv~ 693 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK----Q------------------------------ISSYVEVEMYGLPTDTVRKKFKTKIIE 693 (816)
T ss_dssp CCEEEEEEEEEEECCCSS----C------------------------------CCEEEEEEEESSGGGCEEEEEECCCBC
T ss_pred cceEEEEEEEEcccCCCC----C------------------------------CCCeEEEEEeCCCcccccceeeeEEec
Confidence 358999999999999852 2 899999999641 347999998
Q ss_pred C-CCCCeeeeE-EEEe-ecCC-CceEEEEEEecCCCCCceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEE
Q 045478 99 N-CENPFWDEH-FCVP-VAHS-VVNLEFHVKDNDILGAELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVS 174 (852)
Q Consensus 99 ~-s~nP~WnE~-f~~~-~~~~-~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~ 174 (852)
+ +.||+|||+ |.|. +..+ ...|.|+|+|++ +++||++.|||..|..|. ++++|.+..|.+. ..+.|.+.
T Consensus 694 ~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~-~~atLfv~ 766 (816)
T 3qr0_A 694 NNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPL-GLASVFAH 766 (816)
T ss_dssp SCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEE-EEEEEEEE
T ss_pred CCCCCCeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCC-CceEEEEE
Confidence 6 699999998 9998 6544 357899999975 789999999999999874 5799999888763 34677777
Q ss_pred EEeeec
Q 045478 175 MQYKPI 180 (852)
Q Consensus 175 l~f~~~ 180 (852)
+.+...
T Consensus 767 i~~~~~ 772 (816)
T 3qr0_A 767 IVAKDY 772 (816)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776653
No 61
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.90 E-value=3e-09 Score=128.65 Aligned_cols=113 Identities=21% Similarity=0.392 Sum_probs=91.2
Q ss_pred eeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC-----eeEEEee-eec
Q 045478 25 LHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG-----ATVAQTR-VIS 98 (852)
Q Consensus 25 l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~-----~~~~rT~-vi~ 98 (852)
..|+|.|+|++|++|++. . +||||+|.+-+ ....||+ ++.
T Consensus 676 ~~~~L~V~Visa~~L~~~----~------------------------------~DPYV~V~l~g~p~d~~~k~kTk~vv~ 721 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER----S------------------------------VRTYVEVELFGLPGDPKRRYRTKLSPS 721 (799)
T ss_dssp TCEEEEEEEEEEESCCSS----C------------------------------CCEEEEEEEECCTTSCCCCEECCCCSS
T ss_pred eeeeEEEEEEeccccCcc----C------------------------------CCcEEEEEEEecCCCcccceeeccccc
Confidence 468999999999999852 2 89999999943 1347999 886
Q ss_pred C-CCCCeeee-EEEE-eecCC-CceEEEEEEecCCCCCceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEE
Q 045478 99 N-CENPFWDE-HFCV-PVAHS-VVNLEFHVKDNDILGAELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVS 174 (852)
Q Consensus 99 ~-s~nP~WnE-~f~~-~~~~~-~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~ 174 (852)
+ +.||+||| +|.| .+..+ ...|.|+|+|++ +++||.+.||+..|..|. +|++|.+..|.+. ..+.|.+.
T Consensus 722 ~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~-~~~~Lfv~ 794 (799)
T 2zkm_X 722 TNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSGY---HHLCLHSESNMPL-TMPALFIF 794 (799)
T ss_dssp SCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEE-EEEEEEEE
T ss_pred CCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCCc---EEEeccCCCCCCC-CceEEEEE
Confidence 4 69999999 6999 77544 357899999986 789999999999998764 6899988888764 35778887
Q ss_pred EEee
Q 045478 175 MQYK 178 (852)
Q Consensus 175 l~f~ 178 (852)
+++.
T Consensus 795 i~~~ 798 (799)
T 2zkm_X 795 LEMK 798 (799)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 62
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.90 E-value=2.4e-09 Score=129.50 Aligned_cols=114 Identities=22% Similarity=0.373 Sum_probs=92.3
Q ss_pred eeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEECC-----eeEEEeeeecC-
Q 045478 26 HGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCLSG-----ATVAQTRVISN- 99 (852)
Q Consensus 26 ~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l~~-----~~~~rT~vi~~- 99 (852)
..+|.|+|++|++|+.. . +||||+|.+.+ ....||+++.+
T Consensus 724 ~~~L~V~Visaq~L~~~----~------------------------------~DPYV~V~l~g~p~D~~~k~kTkvi~~N 769 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----K------------------------------VGIYVEVDMFGLPVDTRRKYRTRTSQGN 769 (885)
T ss_dssp CEEEEEEEEEEESCCSS----C------------------------------CCEEEEEEEESSTTTCBCCCCCCCCSSC
T ss_pred ceEEEEEEEEeccCccc----C------------------------------CCcEEEEEEeCCCcccccceeeEEeeCC
Confidence 45899999999999842 2 89999999964 13479999976
Q ss_pred CCCCeeee-EEEEe-ecCC-CceEEEEEEecCCCCCceeeeEeeeceeccCCCceeeeeeeccCCCCCCCCCCEEEEEEE
Q 045478 100 CENPFWDE-HFCVP-VAHS-VVNLEFHVKDNDILGAELIGVVQIPVEKILCGNEVDDWFPIAGSYGKNLKPFPQLHVSMQ 176 (852)
Q Consensus 100 s~nP~WnE-~f~~~-~~~~-~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~~g~~~~~w~~L~~~~g~~~k~~g~l~l~l~ 176 (852)
+.||+||| +|.|. +..+ ...|.|+|+|+| +++||++.|||..|..|. ++++|.+..|.+. ..+.|.+.+.
T Consensus 770 glNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l-~~atLfv~i~ 842 (885)
T 3ohm_B 770 SFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPL-CLPALLIYTE 842 (885)
T ss_dssp SSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEE
T ss_pred CcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCcc-CceEEEEEEE
Confidence 69999999 69998 6443 457899999987 889999999999998774 5799988888652 4578888888
Q ss_pred eeec
Q 045478 177 YKPI 180 (852)
Q Consensus 177 f~~~ 180 (852)
+.+.
T Consensus 843 ~~~~ 846 (885)
T 3ohm_B 843 ASDY 846 (885)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7764
No 63
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.78 E-value=1.2e-08 Score=115.97 Aligned_cols=148 Identities=14% Similarity=0.036 Sum_probs=98.4
Q ss_pred hhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCccccccccccc
Q 045478 239 GQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFIKTE 318 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~~~~ 318 (852)
......++++|.+|+++|+|++..|.| +..+.++|+.+++|||+|+||+ +...+...+.-...
T Consensus 257 ~~i~~~~~~lI~~A~~~I~I~tpYf~p----------------~~~~~~aL~~Aa~rGV~VrIi~-~~~~and~y~~~~~ 319 (458)
T 3hsi_A 257 NELNQVIEDLFLQVQKKLVICTPYFNF----------------PRTLQHKIATLLENGKRVEIIV-GDKVANDFYIPPEQ 319 (458)
T ss_dssp CHHHHHHHHHHHTCSSEEEEECSSSCC----------------CHHHHHHHHHHHTTTCEEEEEE-ECGGGSTTCCCTTS
T ss_pred hHHHHHHHHHHHhcccEEEEEEeccCC----------------CHHHHHHHHHHHHCCCeEEEEE-CCccccCCccCCcc
Confidence 457889999999999999999644433 1589999999999999999998 76532211100000
Q ss_pred ccccCCc-HHH-----------HhhhcCCC-CEEEecCCCCCCcchhhhhccccccccCccceEEecCCCCCCCCceEEE
Q 045478 319 GVMQTHD-EET-----------RKFFKHSS-VNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTPASGNNRKISAF 385 (852)
Q Consensus 319 ~~~~~~~-~~~-----------~~~l~~~g-v~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vAf 385 (852)
.+..... ... ...+..+| +.|..+.. ..+..|.|++|||++ +++
T Consensus 320 ~~~~~~~~~~lye~~~~~f~~~~~~l~~~G~i~V~i~~~---------------~~~~lHaK~~vvD~~--------~~~ 376 (458)
T 3hsi_A 320 PFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLWRD---------------GDNTYHLKGVWVDDR--------YIL 376 (458)
T ss_dssp CCCGGGGHHHHHHHHHHHHHHHTHHHHHHTSEEEEEECB---------------TTBEECCCEEEETTT--------EEE
T ss_pred hhhhhcchHHHHHHhhhhhHHHHHHHHhCCCeEEEEEec---------------CCCceeEEEEEECCe--------EEE
Confidence 0000000 011 11233455 44443321 124779999999998 999
Q ss_pred EcccCCCCCccCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeCh---HHHHHHHHHHHHHhhhh
Q 045478 386 IGGLDLCDGRYDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGP---AAYDILINFEQRWRRST 458 (852)
Q Consensus 386 vGG~nl~~~r~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gp---aa~dl~~~F~~rW~~~~ 458 (852)
||+.|++..-+. --.++.+.|.+| .+.++.+.|.+.|..+.
T Consensus 377 vGS~N~d~RS~~--------------------------------lN~E~~~~i~~~~~~l~~~l~~~f~~~~~~s~ 420 (458)
T 3hsi_A 377 LTGNNLNPRAWR--------------------------------LDAENGLLIYDPQQQLLAQVEKEQNQIRQHTK 420 (458)
T ss_dssp EECCCCSHHHHH--------------------------------TCEEEEEEEECTTCSSHHHHHHHHHHHHTTEE
T ss_pred ecCCCCCcchhh--------------------------------hCceeEEEEeCCcHHHHHHHHHHHHHHHHhCe
Confidence 999999872221 112688899988 79999999999998643
No 64
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.57 E-value=1e-07 Score=110.39 Aligned_cols=159 Identities=20% Similarity=0.231 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeCCCcccccccccccc
Q 045478 240 QCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFIKTEG 319 (852)
Q Consensus 240 ~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~~~~~ 319 (852)
.....++++|.+||++|+|+.-.|.| |++... -....|.++|+.+++|||+|+||+ +........ ...+
T Consensus 314 ~~~~~~~~~I~~A~~~I~I~tq~~~p--yf~p~~------~~~~~i~~aL~~Aa~rGV~VrIl~-~~~~~~~~~--~~a~ 382 (506)
T 1v0w_A 314 PEESALRALVASAKGHIEISQQDLNA--TCPPLP------RYDIRLYDALAAKMAAGVKVRIVV-SDPANRGAV--GSGG 382 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCSSC--CTTTSC------SCCHHHHHHHHHHHHTTCEEEEEE-CCGGGCC--------
T ss_pred cHHHHHHHHHhCcCcEEEEEeccccc--cccCcc------cchHHHHHHHHHHHhCCCcEEEEe-CCCCchHHH--HHhH
Confidence 46789999999999999999632222 111000 012599999999999999999998 654211100 0000
Q ss_pred cccCCc-HHH------HhhhcCC-----------CCEEEecCCCCCCcchhhhhccccccccCccceEEecCCCCCCCCc
Q 045478 320 VMQTHD-EET------RKFFKHS-----------SVNCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVIVDTPASGNNRK 381 (852)
Q Consensus 320 ~~~~~~-~~~------~~~l~~~-----------gv~v~~~~~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~ 381 (852)
...... .+. ...+... ++++..+...+. ..+ ..+.....|.|++|||++
T Consensus 383 ~~~~~~L~~~~~~l~~gv~ll~~g~~e~~~~~~~~l~i~~~~~~~~--~~~----~~~~~~~lHaK~~vvD~~------- 449 (506)
T 1v0w_A 383 YSQIKSLSEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSSPN--GKW----ADGHPYAQHHKLVSVDSS------- 449 (506)
T ss_dssp CCCCSCTHHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSSSS--SSC----TTSCCCCBCCEEEEETTT-------
T ss_pred HHHHHHHHHhhhhhcccchhcccccchhccccccceeeeeccccCc--ccc----ccCccccceEEEEEECCc-------
Confidence 000000 000 0000011 123321110000 000 000123689999999998
Q ss_pred eEEEEcccCCCCCccCCCCcCCCCCCcccccCCCCCCCCCCCCCCCCCceeeceeeeeCh-HHHHHHHHHHHH-Hhhhh
Q 045478 382 ISAFIGGLDLCDGRYDTPEHRLFGDLNTVFANDFHNPSLPSHAKGPREPWHDMHCKVEGP-AAYDILINFEQR-WRRST 458 (852)
Q Consensus 382 ~vAfvGG~nl~~~r~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~pWhDv~~~v~Gp-aa~dl~~~F~~r-W~~~~ 458 (852)
++++|+.|+.. |. ++++.+.|++| .+.++.+.|.+. |+...
T Consensus 450 -~~~vGS~N~d~-rS----------------------------------~~E~~l~i~~~~~a~~l~~~f~~~~w~~s~ 492 (506)
T 1v0w_A 450 -TFYIGSKNLYP-SW----------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKYSQ 492 (506)
T ss_dssp -EEEEESCCSSC-CC----------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHHHG
T ss_pred -EEEEeCCCCCC-cc----------------------------------hhhceeEecCHHHHHHHHHHHHHHHHhhcc
Confidence 99999999965 42 13789999998 688899999975 87543
No 65
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=98.05 E-value=8.3e-06 Score=95.86 Aligned_cols=119 Identities=13% Similarity=0.170 Sum_probs=83.0
Q ss_pred HHHHHHHHHhccc-----eEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCc
Q 045478 548 HSAYVKAIRSAQH-----FIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMWPEGNPNS 622 (852)
Q Consensus 548 ~~ayl~aI~~Ak~-----~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~peg~~~~ 622 (852)
.++++++|++|++ .|.|+ .|.++.. ..++.++++|. .+|++|+|++....-.+..
T Consensus 354 f~~vi~~I~~A~~DP~V~sIk~t-lYr~~~d----------------s~Iv~ALi~AA--~rGv~V~vLvel~arfdee- 413 (705)
T 2o8r_A 354 YDYVVRLLMEAAISPDVSEIRLT-QYRVAEN----------------SSIISALEAAA--QSGKKVSVFVELKARFDEE- 413 (705)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEE-ESCCCSC----------------CHHHHHHHHHH--HTTCEEEEEECCCSCC----
T ss_pred HHHHHHHHHHhccCCCceEEEEE-EEEEcCC----------------HHHHHHHHHHH--HCCCEEEEEEeCCCCcchh-
Confidence 3489999999999 99974 5655321 14566666664 3779999999853211100
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCceEEeeCCCCCCCCCCccccchhhhhHHHHHHHhhcceeEEE
Q 045478 623 AAVQEILYWQGQTMSMMYKIVAQALQDNGLSNKYHPQDYLSFYCLGKREAPPLDRSQMNQQTENRALAAAQKFRRFMIYV 702 (852)
Q Consensus 623 ~~~~~~~~~~~~t~~~~~~~i~~~L~~~Gv~~~~~p~~y~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iyv 702 (852)
. .. ...+.|.++|+++.| .+ . ...+
T Consensus 414 ~---------ni-------~wa~~Le~aGv~Vv~---------g~----------~--------------------~lk~ 438 (705)
T 2o8r_A 414 N---------NL-------RLSERMRRSGIRIVY---------SM----------P--------------------GLKV 438 (705)
T ss_dssp ----------CH-------HHHHHHHHHTCEEEE---------CC----------T--------------------TCCB
T ss_pred h---------hH-------HHHHHHHHCCCEEEE---------cc----------C--------------------CCCc
Confidence 0 00 126789999998632 11 0 1368
Q ss_pred EeeEEEEcce---------eEEecCcCcccCCCCCCCCceeEEEEecCcc
Q 045478 703 HAKGMIVDDE---------YVIMGSANINQRSLEGSRDTEIAMGAYQPHY 743 (852)
Q Consensus 703 HSKlmIVDD~---------~~iIGSANln~RSm~~n~DsEi~v~i~d~~~ 743 (852)
|+|++|||++ |+.+|+.|+|+.+.... +++++.+.++..
T Consensus 439 H~Ki~lIdrr~~~~g~~~~y~~igtGN~n~~tariy--~D~~l~t~~~~i 486 (705)
T 2o8r_A 439 HAKTALILYHTPAGERPQGIALLSTGNFNETTARIY--SDTTLMTANTDI 486 (705)
T ss_dssp CCCEEEEEECCCSSSCCCEEEEEESSCSSCCCSSCE--EEEEEEECCHHH
T ss_pred eeEEEEEecccccCCceeEEEeccccceeeeEEEEE--eeeeeeecChHH
Confidence 9999999988 68899999999999865 899999887754
No 66
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=96.14 E-value=0.0091 Score=65.05 Aligned_cols=48 Identities=21% Similarity=0.152 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEE
Q 045478 239 GQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLI 303 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLv 303 (852)
+.....+.+.|.+|+++|++..|.- .-..+.+.|.++++|||+|++++
T Consensus 118 ~~I~~ri~eli~~A~~eI~i~~~~~-----------------~l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 118 DEAIEMFRESLYSAKNEVIVVTPSE-----------------FFETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEECHH-----------------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhhheEEEEEeCHH-----------------HHHHHHHHHHHHHhCCCEEEEEE
Confidence 5778999999999999999987631 01477889999999999999997
No 67
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=95.18 E-value=0.017 Score=62.97 Aligned_cols=52 Identities=8% Similarity=0.058 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHhccceEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCC
Q 045478 544 DKSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPMW 615 (852)
Q Consensus 544 e~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~~ 615 (852)
...|.+....+|++|++.|||..++.. -..+...+.++. .+||+|++++|..
T Consensus 117 ~~~I~~ri~eli~~A~~eI~i~~~~~~------------------l~~l~~~L~~a~--~RGV~Vrvi~~~~ 168 (342)
T 3qph_A 117 FDEAIEMFRESLYSAKNEVIVVTPSEF------------------FETIREDLIKTL--ERGVTVSLYIDKI 168 (342)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECHHH------------------HHHHHHHHHHHH--HTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHHhhheEEEEEeCHHH------------------HHHHHHHHHHHH--hCCCEEEEEECCC
Confidence 367888999999999999999865432 112333444443 4789999999843
No 68
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=94.95 E-value=0.035 Score=56.81 Aligned_cols=50 Identities=20% Similarity=0.102 Sum_probs=43.1
Q ss_pred hhhHHHHHHHHHhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEEeC
Q 045478 239 GQCWEEICHAVLEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLIWD 305 (852)
Q Consensus 239 ~~~~~~l~~aI~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLvwD 305 (852)
+...+.+.+.|++|+++|++..|. ..-.+|.+.|++|++|||.|+|+++.
T Consensus 9 e~Ii~r~~e~I~~A~~el~lsi~~-----------------e~l~~l~~~L~~A~~rGV~V~liv~~ 58 (233)
T 2f5t_X 9 DEAIEMFRESLYSAKNEVIVVTPS-----------------EFFETIREDLIKTLERGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECG-----------------GGHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhEEEEEeCH-----------------HHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 677899999999999999998763 12368999999999999999999954
No 69
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=81.91 E-value=5.3 Score=40.24 Aligned_cols=39 Identities=18% Similarity=0.132 Sum_probs=33.3
Q ss_pred EEEeeEEEE---cceeEEecCcCcccCCCCCCCCceeEEEEecC
Q 045478 701 YVHAKGMIV---DDEYVIMGSANINQRSLEGSRDTEIAMGAYQP 741 (852)
Q Consensus 701 yvHSKlmIV---DD~~~iIGSANln~RSm~~n~DsEi~v~i~d~ 741 (852)
.+|+|+... |...++|||.|+..--|..| -|+++.+.+.
T Consensus 103 i~HaK~Yg~~~n~g~~LIV~SgNfT~pGmsQN--vE~sllld~~ 144 (358)
T 2c1l_A 103 ILHAKLYGTSNNLGESLVVSSGNFTGPGMSQN--IEASLLLDNN 144 (358)
T ss_dssp CBCCEEEEEEETTEEEEEEESCCBSTTTTTTS--BEEEEEECHH
T ss_pred ecchhhhcccCCCceEEEEecCCccccccccc--eeEEEEEcCC
Confidence 678888765 67889999999999999866 9999999765
No 70
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=64.94 E-value=25 Score=33.08 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=66.0
Q ss_pred CCc--EEEEEECCeeEEEeeeecCCCCCeeeeEEEEeecCC--------CceEEEEEEecCCCCCceeeeEeeeceeccC
Q 045478 78 SNP--YVSVCLSGATVAQTRVISNCENPFWDEHFCVPVAHS--------VVNLEFHVKDNDILGAELIGVVQIPVEKILC 147 (852)
Q Consensus 78 sdp--Yv~v~l~~~~~~rT~vi~~s~nP~WnE~f~~~~~~~--------~~~l~~~V~d~d~~~~~~iG~~~i~l~~l~~ 147 (852)
.+| ||++++-.-...-|-++. +.+|.+|-+-++.+.-. ...+.+++.......-..||+++|++.++..
T Consensus 40 ~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe 118 (156)
T 2yrb_A 40 KEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILE 118 (156)
T ss_dssp SCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHH
T ss_pred cCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhC
Confidence 355 455544344435666665 78999998888877532 2345666666432225799999999999984
Q ss_pred C-CceeeeeeeccCCCCCCCCCCEEEEEEEee
Q 045478 148 G-NEVDDWFPIAGSYGKNLKPFPQLHVSMQYK 178 (852)
Q Consensus 148 g-~~~~~w~~L~~~~g~~~k~~g~l~l~l~f~ 178 (852)
. +.+.+-.+|.+..|.. ..-|.|.+.|++.
T Consensus 119 ~~~~i~g~~~L~g~~g~~-~~~G~LeywiRL~ 149 (156)
T 2yrb_A 119 KSGRIFCTASLIGTKGDI-PNFGTVEYWFRLR 149 (156)
T ss_dssp CCSCEEEEEEECBSSSCC-TTSEEEEEEEEEE
T ss_pred cCCceEEEEEEEcCCCCc-ceEEEEEEEEEEe
Confidence 4 3466777887766632 3568898888865
No 71
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=62.77 E-value=14 Score=36.81 Aligned_cols=39 Identities=15% Similarity=0.297 Sum_probs=31.2
Q ss_pred eEEEeeeecCCCCCeeeeEEEEeecCC---CceEEEEEEecC
Q 045478 90 TVAQTRVISNCENPFWDEHFCVPVAHS---VVNLEFHVKDND 128 (852)
Q Consensus 90 ~~~rT~vi~~s~nP~WnE~f~~~~~~~---~~~l~~~V~d~d 128 (852)
..++|.|...+.+|.|+|++.+.++.. ...|.|+++...
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 347899999999999999999998753 456788887643
No 72
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=61.87 E-value=42 Score=40.95 Aligned_cols=71 Identities=13% Similarity=0.299 Sum_probs=49.2
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEE--CCee---EEEeeeec
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCL--SGAT---VAQTRVIS 98 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l--~~~~---~~rT~vi~ 98 (852)
-+...+.|+|.++.++... .. ++.||++.+ ++.. ...|+.+.
T Consensus 214 ~~~~~f~i~i~~~~~~~~~---~~------------------------------~~~~V~~~l~~g~~~l~~~~~T~~~~ 260 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNAD---ER------------------------------MKLVVQAGLFHGNEMLCKTVSSSEVN 260 (940)
T ss_dssp TCCSEEEEEEEEEECCCC------------------------------------CEEEEEEEEEETTEESSCCEECCCEE
T ss_pred hcCCceEEEEEEecccCCC---CC------------------------------ceEEEEEEEEECCEEccCceeccccc
Confidence 3577899999999988632 11 577888765 4442 23455555
Q ss_pred CCCCCeeeeEEEEeecC----CCceEEEEEEec
Q 045478 99 NCENPFWDEHFCVPVAH----SVVNLEFHVKDN 127 (852)
Q Consensus 99 ~s~nP~WnE~f~~~~~~----~~~~l~~~V~d~ 127 (852)
-..+|.|||.+.|++.- ..+.+.|+|++-
T Consensus 261 ~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 261 VCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp SCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 57789999988887542 356788999884
No 73
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=45.57 E-value=1.1e+02 Score=37.94 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=56.3
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEE--CCe---eEEEeeeec
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCL--SGA---TVAQTRVIS 98 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l--~~~---~~~rT~vi~ 98 (852)
-+...+.|+|..+.++... .... .+.||++.+ ++. ...+|+.+.
T Consensus 352 ~~~~~f~v~i~~~~~~n~~-~~~~------------------------------~~~~V~~~l~hG~~~L~~~~~T~~~~ 400 (1091)
T 3hhm_A 352 VINSALRIKILCATYVNVN-IRDI------------------------------DKIYVRTGIYHGGEPLCDNVNTQRVP 400 (1091)
T ss_dssp GCCSEEEEEEEEESCCCCC-CSSC------------------------------CCCCEEEEEESSSCSSCCEECCCCCC
T ss_pred hCCCCEEEEEEEecCCCCC-cccc------------------------------ceEEEEEEEEECCEEccCceeccccC
Confidence 3577899999999887522 1111 577888887 333 223444333
Q ss_pred CCCCCeeeeEEEEeec--C--CCceEEEEEEecCCCC-----CceeeeEeeeceec
Q 045478 99 NCENPFWDEHFCVPVA--H--SVVNLEFHVKDNDILG-----AELIGVVQIPVEKI 145 (852)
Q Consensus 99 ~s~nP~WnE~f~~~~~--~--~~~~l~~~V~d~d~~~-----~~~iG~~~i~l~~l 145 (852)
..+|.|||...|++. + ..+.+.|+|++-...+ ...||.+.+++-+-
T Consensus 401 -~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 401 -CSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp -TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCT
T ss_pred -CCCCCCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEcc
Confidence 567889998888754 2 4577899999854321 24677777766543
No 74
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=43.33 E-value=39 Score=34.11 Aligned_cols=50 Identities=8% Similarity=0.140 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHhccceEEEeecccccCCCCCCccccCCCCCccHHHHHHHHHHHHHcCCCcEEEEEecC
Q 045478 545 KSIHSAYVKAIRSAQHFIYIENQYFIGSSYHWPSYKNAGADNLIPMELALKIVSKINANERFSVYVVIPM 614 (852)
Q Consensus 545 ~sI~~ayl~aI~~Ak~~IyIEnqYFi~~~~~wp~~~~~~~~n~i~~~~a~~ia~~~~~~~~v~V~IvlP~ 614 (852)
..|.+-..++|++|++.|+++- |++. -..+...|.+|. ++||.|+|++..
T Consensus 9 e~Ii~r~~e~I~~A~~el~lsi---------~~e~---------l~~l~~~L~~A~--~rGV~V~liv~~ 58 (233)
T 2f5t_X 9 DEAIEMFRESLYSAKNEVIVVT---------PSEF---------FETIREDLIKTL--ERGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEE---------CGGG---------HHHHHHHHHHHH--HTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhEEEEEe---------CHHH---------HHHHHHHHHHHH--HCCCEEEEEEcC
Confidence 5677888999999999999942 2322 234556666664 477999999973
No 75
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=34.82 E-value=1.6e+02 Score=35.93 Aligned_cols=50 Identities=10% Similarity=0.149 Sum_probs=33.6
Q ss_pred CCcEEEEEE--CCeeE--EEeeeecCCCCCeeeeEEEEeecC----CCceEEEEEEec
Q 045478 78 SNPYVSVCL--SGATV--AQTRVISNCENPFWDEHFCVPVAH----SVVNLEFHVKDN 127 (852)
Q Consensus 78 sdpYv~v~l--~~~~~--~rT~vi~~s~nP~WnE~f~~~~~~----~~~~l~~~V~d~ 127 (852)
++-||++.+ ++... .+|..+.-+.+|.|||.+.|++.- ..+.+.|+|++.
T Consensus 238 ~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 238 LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 577888665 55432 345555457789999988887542 356788898874
No 76
>1q32_A TDP1P;, tyrosyl-DNA phosphodiesterase; DNA repair, replication, transcription, hydrolase, replication,transcription, hydrolase; 2.03A {Saccharomyces cerevisiae} SCOP: d.136.1.3 d.136.1.3
Probab=33.38 E-value=15 Score=41.84 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=23.7
Q ss_pred cccCccceEEecCCCCCCCCceEEEEcccCCCCCccC
Q 045478 361 LFTHHQKCVIVDTPASGNNRKISAFIGGLDLCDGRYD 397 (852)
Q Consensus 361 ~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl~~~r~D 397 (852)
+.+||-|++|.=.+ ...+...|-..||...-|.
T Consensus 178 fGthHSKmmlL~y~----dg~lRVVI~TANLi~~DW~ 210 (544)
T 1q32_A 178 FASHHTKLIINFYD----NGECKIFLPSNNFTSMETN 210 (544)
T ss_dssp TCCBCCCEEEEEES----TTEEEEEEESSCBSHHHHH
T ss_pred CCCCCceeEEEEec----CCCEEEEEeCCCCChHHhc
Confidence 46999999998443 0114778888999886664
No 77
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=27.28 E-value=1.1e+02 Score=26.42 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=35.8
Q ss_pred CcccchhhhHHHHHHHHHhc---cc-eEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhcCCeEEEEE
Q 045478 233 GKTFRHGQCWEEICHAVLEA---RH-LIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQEGVRVLLLI 303 (852)
Q Consensus 233 g~~y~~~~~~~~l~~aI~~A---k~-~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~GV~VriLv 303 (852)
..+|.++..+.++.-+...+ .+ .|-| +.+.+.+++......| .....+.+.|+...+.||+|++-.
T Consensus 10 ~~p~~~~~~~~al~~a~~~~~~~g~~~v~v--ff~~dgV~~~~~~~~~---~~~~~~~~~l~~l~~~gv~v~~C~ 79 (117)
T 1jx7_A 10 GAPYGSESLFNSLRLAIALREQESNLDLRL--FLMSDAVTAGLRGQKP---GEGYNIQQMLEILTAQNVPVKLCK 79 (117)
T ss_dssp CCTTTCSHHHHHHHHHHHHHHHCTTCEEEE--EECGGGGGGGBSCCCC---SSSCCHHHHHHHHHHTTCCEEEEH
T ss_pred CCCCCcHHHHHHHHHHHHHHhcCCCccEEE--EEEchHHHHHhcCCCC---CcCCCHHHHHHHHHHCCCEEEEeH
Confidence 33454455665554443322 33 3322 3334555555433222 112578889998888999888763
No 78
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=25.71 E-value=68 Score=39.78 Aligned_cols=71 Identities=14% Similarity=0.216 Sum_probs=47.2
Q ss_pred eeeeEEEEEEEEecCCCCCCCcchhhhcccccCCcccCCCccccCCCCCCCCcCCCcEEEEEE--CCeeE---EEeeeec
Q 045478 24 FLHGDLDLSILEAKSLPNMDLITESMRKCCNMCGHCRFPFKKTRGLSGRHSMITSNPYVSVCL--SGATV---AQTRVIS 98 (852)
Q Consensus 24 ~l~G~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sdpYv~v~l--~~~~~---~rT~vi~ 98 (852)
-+...+.|+|..+.++...+ . ++.||++.+ ++... ..|+.+.
T Consensus 350 ~~~~~f~i~i~~~~~~~~~~---~------------------------------~~~~V~~~l~~g~~~L~~~~~T~~~~ 396 (1092)
T 2y3a_A 350 DNNNPFQITLVKGNKLNTEE---T------------------------------VKVHVRAGLFHGTELLCKTVVSSEIS 396 (1092)
T ss_dssp CCCSEEEEEECCCCCCCCCS---S------------------------------CCCCCBCCEEETTEESSCCCBCCCCC
T ss_pred hcCCCEEEEEEEeccCCCCC---C------------------------------ceEEEEEEEEECCEEccCceeccccc
Confidence 35778999999998875321 1 566766443 55432 2455555
Q ss_pred CCCCCeeeeEEEEeecC----CCceEEEEEEec
Q 045478 99 NCENPFWDEHFCVPVAH----SVVNLEFHVKDN 127 (852)
Q Consensus 99 ~s~nP~WnE~f~~~~~~----~~~~l~~~V~d~ 127 (852)
-+.+|.|||.+.|++.- ..+.+.|+|++.
T Consensus 397 ~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 397 GKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp SSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 57789999988887543 346778999874
No 79
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=25.48 E-value=1.4e+02 Score=30.22 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=56.4
Q ss_pred CcchHHHHHHHhhhcCCeEEEEEeCCCcccccccccccccccCCcHHHHhhhcCCCCEEEecCCCCCCcchhhhhccccc
Q 045478 281 GELSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFIKTEGVMQTHDEETRKFFKHSSVNCVLAPRYASNKLSIFKQQVVGT 360 (852)
Q Consensus 281 ~~~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~~~~~~~~~~~ 360 (852)
.+.++.+.+.+..++|++|.+++ -...+... .+++..+.+..-||++.+.++.
T Consensus 49 Ggvrfy~~f~~h~~~Ggkv~~Il-GgstsQrl-----------TSKQavEElL~cGvev~IiNrk--------------- 101 (358)
T 2c1l_A 49 GGVRFYETFTEHINQGGRVIAIL-GGSTSQRL-----------SSRQVVEELLNRGVEVHIINRK--------------- 101 (358)
T ss_dssp GTTTTHHHHHHHHHTTCEEEEEE-ECCSSSCC-----------BBHHHHHHHHHTTCEEEEEECS---------------
T ss_pred CceeecHHHHHHHhcCCcEEEEE-cccccccc-----------cHHHHHHHHHhcCCceEEeeee---------------
Confidence 35799999999999999999998 43222211 1467788888889999876532
Q ss_pred cccCccceEEecCCCCCCCCceEEEEcccCCCC
Q 045478 361 LFTHHQKCVIVDTPASGNNRKISAFIGGLDLCD 393 (852)
Q Consensus 361 ~~~hHqK~vVVD~~~~~~~~~~vAfvGG~nl~~ 393 (852)
.-.|-|+...-.. ..-...||+-|++.
T Consensus 102 -Ri~HaK~Yg~~~n-----~g~~LIV~SgNfT~ 128 (358)
T 2c1l_A 102 -RILHAKLYGTSNN-----LGESLVVSSGNFTG 128 (358)
T ss_dssp -SCBCCEEEEEEET-----TEEEEEEESCCBST
T ss_pred -eecchhhhcccCC-----CceEEEEecCCccc
Confidence 1249998887432 11267889899887
No 80
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.11 E-value=81 Score=27.30 Aligned_cols=45 Identities=16% Similarity=0.396 Sum_probs=32.0
Q ss_pred chHHHHHHHhhhcCCeEEEEEeCCCcccccccccccccccCCcHHHHhhhcCCCCEEEe
Q 045478 283 LSFGELLKHKSQEGVRVLLLIWDDKTSHDNLFIKTEGVMQTHDEETRKFFKHSSVNCVL 341 (852)
Q Consensus 283 ~~l~~~L~~~a~~GV~VriLvwD~~~s~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~ 341 (852)
.-|.+.+.++.++||+|.+. |++...-. ..+....|+..||.++.
T Consensus 90 ewikdfieeakergvevfvv-ynnkdddr-------------rkeaqqefrsdgvdvrt 134 (162)
T 2l82_A 90 EWIKDFIEEAKERGVEVFVV-YNNKDDDR-------------RKEAQQEFRSDGVDVRT 134 (162)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-EECSCHHH-------------HHHHHHHHCCSSCEEEE
T ss_pred HHHHHHHHHHHhcCcEEEEE-ecCCCchh-------------HHHHHHHhhhcCceeee
Confidence 46778888888999999988 56542100 13456678899999874
No 81
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=22.46 E-value=1.8e+02 Score=25.92 Aligned_cols=70 Identities=13% Similarity=0.095 Sum_probs=37.5
Q ss_pred cCCcccchhhhHHHHHHHH--HhccceEEEEEeecccceeEecCCCCCCCCCCcchHHHHHHHhhhc-CCeEEEEE
Q 045478 231 DGGKTFRHGQCWEEICHAV--LEARHLIYIIGWSVFHPVKLVREPTKPLPSFGELSFGELLKHKSQE-GVRVLLLI 303 (852)
Q Consensus 231 ~~g~~y~~~~~~~~l~~aI--~~Ak~~I~I~~w~~~~~~~l~r~~~~~~~~~~~~~l~~~L~~~a~~-GV~VriLv 303 (852)
+.+.+|.++.++.++.=+. .+..+.|. .-|.+.+.+++......|. .....+.+.|++.+++ ||+|++-.
T Consensus 7 v~~~p~~~~~~~~al~~a~a~~~~g~~v~-~vff~~dGV~~~~~~~~p~--~~~~~l~~~~~~L~~~~gv~l~vC~ 79 (130)
T 2hy5_A 7 INEGPYQHQASDSAYQFAKAALEKGHEIF-RVFFYHDGVNNSTRLTTPP--QDDRHIVNRWAELAEQYELDMVVCV 79 (130)
T ss_dssp ECSCTTTSTHHHHHHHHHHHHHHTTCEEE-EEEECGGGGGGGBSCCCCC--TTSCCHHHHHHHHHHHHTCCEEEEH
T ss_pred EeCCCCCcHHHHHHHHHHHHHHhcCCeeC-EEEEechHHHHHhcCCCCC--cccCCHHHHHHHHHHHcCCeEEEeH
Confidence 4455565566666554333 33345551 2233445555544322221 2235788888888776 99887764
No 82
>1jy1_A TDP1, tyrosyl-DNA phosphodiesterase; PLD superfamily, hydrolase; 1.69A {Homo sapiens} SCOP: d.136.1.3 d.136.1.3 PDB: 1rff_A* 1mu9_A 1nop_A 1mu7_A* 1rfi_A* 1rg1_A* 1rg2_A* 1rgt_A* 1rgu_A* 1rh0_A* 1qzq_A
Probab=20.85 E-value=44 Score=37.34 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=0.0
Q ss_pred hcceeEEEEeeEEEEcc------eeEEecCcCc----------ccCCCCCCCCceeEEEE
Q 045478 695 FRRFMIYVHAKGMIVDD------EYVIMGSANI----------NQRSLEGSRDTEIAMGA 738 (852)
Q Consensus 695 ~~~~~iyvHSKlmIVDD------~~~iIGSANl----------n~RSm~~n~DsEi~v~i 738 (852)
.+|....-|.|+.+-=+ .|+++||||| |...+.. +..||+|++
T Consensus 341 ~~R~~a~pHiKty~r~~~~~~~~~W~lltSaNLSkaAWG~~~k~~~~l~I-~nyElGVl~ 399 (464)
T 1jy1_A 341 SGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMI-RSYELGVLF 399 (464)
T ss_dssp GTCTTSCBCCEEEEEECTTSSEEEEEEEESCCBSHHHHCEEETTTTEEEE-CSBEEEEEE
T ss_pred cCCCCcCCceeeEEecCCCCCeecEEEEccccCCHHHhCccccCCCceeE-eeeeeeEEE
No 83
>3ech_C 25-MER fragment of protein ARMR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa}
Probab=20.53 E-value=71 Score=19.52 Aligned_cols=19 Identities=21% Similarity=0.504 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHh-HHHHhh
Q 045478 782 ECMQRVNRIAGEN-WKAFVC 800 (852)
Q Consensus 782 ~~~~~~~~~a~~n-~~~~~~ 800 (852)
.|.+.++++|.+| |..|++
T Consensus 3 ~~te~lrr~arrnawdly~e 22 (25)
T 3ech_C 3 DYTEQLRRAARRNAWDLYGE 22 (26)
T ss_dssp CHHHHHHHHHHHTHHHHHHS
T ss_pred cHHHHHHHHHHHhHHHHHHH
Confidence 4778888888887 877753
Done!