Your job contains 1 sequence.
>045479
MTQSLSVSSQNDTFFRCSFFSSTPALIHRNSYSFHQASKKSRNISISVTCASPKIVRSPS
LDKHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLPKLKSIRSMIHRYPMIF
EVFAVPMPPTPLNATKSGYQQCVRLTPAAAALAAQEISLKSAISNTLANKLQKLLMLSSH
RRLLLSKLVHLASDLGLLPNFRSRLCNDYPDKFKIVDTSYGRALELVSWDPQLAVPMPCA
ETKSLGLIVDRPLKFRHLKLRKGLNLKRRHRNFLIKFGELPDVCPYNTSSEEFPKESLQA
EKRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLRAMILRHPELFYVSPKGIRNSV
QLVEEFDEKGVLLKRDETLLIKEKLMELVREGKKMRRERRKQSIFGNCIDECCSDGGHDE
VDELDNNDDDGFENLFESADSDLDYHFDDDGSFELGDHWENGELWTASSVLTNKDGQCIT
PW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045479
(482 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2166305 - symbol:emb1692 "embryo defective 169... 1024 3.5e-107 2
TAIR|locus:4515103321 - symbol:WTF1 "what's this factor?"... 434 7.5e-41 1
TAIR|locus:2138738 - symbol:AT4G08940 species:3702 "Arabi... 228 1.2e-16 1
TAIR|locus:2009230 - symbol:AT1G06440 species:3702 "Arabi... 214 5.2e-15 1
TAIR|locus:504955534 - symbol:RPD1 "ROOT PRIMORDIUM DEFEC... 160 2.2e-13 2
TAIR|locus:2042561 - symbol:AT2G31290 species:3702 "Arabi... 198 4.5e-13 1
TAIR|locus:2012981 - symbol:AT1G71850 "AT1G71850" species... 190 5.0e-12 1
TAIR|locus:2064940 - symbol:WTF9 "AT2G39120" species:3702... 178 7.1e-11 1
TAIR|locus:2207380 - symbol:AT1G79120 species:3702 "Arabi... 124 9.2e-05 1
>TAIR|locus:2166305 [details] [associations]
symbol:emb1692 "embryo defective 1692" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016787
EMBL:AB009051 InterPro:IPR021099 Pfam:PF11955 EMBL:DQ447107
IPI:IPI00537127 RefSeq:NP_201104.1 UniGene:At.55687
EnsemblPlants:AT5G62990.1 GeneID:836419 KEGG:ath:AT5G62990
TAIR:At5g62990 eggNOG:NOG271848 HOGENOM:HOG000115856
InParanoid:Q9FM53 OMA:NLKRRHQ PhylomeDB:Q9FM53
ProtClustDB:CLSN2687529 Genevestigator:Q9FM53 Uniprot:Q9FM53
Length = 494
Score = 1024 (365.5 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 217/390 (55%), Positives = 261/390 (66%)
Query: 1 MTQSLSVSSQNDTFFRCSFF-SSTPALIHRNSYSFHQASKKSRNISISVTCASPKIVRSP 59
+TQ L SS F SFF S P I R++ + +SKK ++S++++C++ KIVRSP
Sbjct: 5 LTQ-LVPSSPEKLFCFSSFFLPSIPLEIRRSNVTTKTSSKKLGSLSLNISCSAHKIVRSP 63
Query: 60 SLDKHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLPKLKSIRSMIHRYPMI 119
SLD+H+V NR RFVQKL TLLLSKPKHYIPI IL KCRSYL + +I SMI RYP I
Sbjct: 64 SLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTI 123
Query: 120 FEVFAVPMPPTPLNATKSGYQQCVRLTPXXXXXXXQEISLKSAISNTLANKLQXXXXXXX 179
FE+F P P P+NATK Q CVRLT QE++LKS IS+ LA KLQ
Sbjct: 124 FELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSS 183
Query: 180 XXXXXXXXXXXXXXXXGLLPNFRSRLCNDYPDKFKIVDTSYGRALELVSWDPQLAVPMPC 239
G PNFRSRLCNDYPDKFK VDTSYGRALELVS DP+LA MP
Sbjct: 184 HRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELANQMPS 243
Query: 240 AETKSLGLIVDRPLKFXXXXXXXXXXXXXXXXXFLIKFGELPDVCPYNTSSEEFPKESLQ 299
E GLIVDRPLKF FLIKF E PDVCPY SS+ ES++
Sbjct: 244 PEVDR-GLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYLASESIE 302
Query: 300 AEKRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLRAMILRHPELFYVSPKGIRNS 359
AEKRACA+VREVLG+ VEK+TLIDHLTHFRK+F L N LR +I+RHPELFYVS KG+R+S
Sbjct: 303 AEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIKGMRDS 362
Query: 360 VQLVEEFDEKGVLLKRDETLLIKEKLMELV 389
V LVE +++ G LL +DE L+I+E+L++L+
Sbjct: 363 VFLVEAYNDNGDLLDKDERLVIRERLIDLI 392
Score = 56 (24.8 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 438 SADSDLDYHFDD-DGSFELGDHWENGELWT 466
S D ++YHFD+ D E G + E+ E W+
Sbjct: 445 SEDLGVEYHFDEEDDDDEAGVNGESVEYWS 474
>TAIR|locus:4515103321 [details] [associations]
symbol:WTF1 "what's this factor?" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] EMBL:CP002687 GO:GO:0016787 EMBL:DQ653402
IPI:IPI00531143 RefSeq:NP_001118908.1 UniGene:At.47990 PRIDE:A0MFS5
EnsemblPlants:AT4G01037.1 GeneID:6240517 KEGG:ath:AT4G01037
TAIR:At4g01037 eggNOG:NOG312847 OMA:RIMLLRE PhylomeDB:A0MFS5
ProtClustDB:CLSN2695822 Genevestigator:A0MFS5 InterPro:IPR021099
Pfam:PF11955 Uniprot:A0MFS5
Length = 528
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 110/372 (29%), Positives = 175/372 (47%)
Query: 26 LIHRNSYSFHQASKKSRNISISVTCASPKIVRSPSLDKHIVTHNRTRFVQKLKTLLLSKP 85
LI N Y F S+K+R + + A+ K + + D + + + V ++ +L+S+P
Sbjct: 50 LILGNKYGFWSTSRKTR-VVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQP 108
Query: 86 KHYIPIHILSKCRSYLSLPKLKSIRSMIHRYPMIFEVFAVPMPPTPLNATKSGYQQCVRL 145
+ + L K R L L K + +++ +YP +FE+ + Y ++
Sbjct: 109 DRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEI-----------VEEGAYSLRFKM 157
Query: 146 TPXXXXXXXQEISLKSAISNTLANKLQXXXXXXXXXXXXXXXXXXXXXXXGLLPNFRSRL 205
T E+ +++ + + L KL+ GL FR +
Sbjct: 158 TSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTI 217
Query: 206 CNDYPDKFKIVDTSYGRALELVSWDPQLAVPMP--------CAETKSLGLIVDRPLKFXX 257
C YP F++V T G ALEL WDP+LAV E++ LI+DRP KF
Sbjct: 218 CQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNR 277
Query: 258 XXXXXXXXXXXXXXXFLIKFGELPDVCPYNTSSEEFPKESLQAEKRACALVREVLGMMVE 317
+ +F ++ + PY S +L+ EK AC ++ E+L + E
Sbjct: 278 VKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH-LRSGTLEKEKHACGVIHELLSLTTE 336
Query: 318 KQTLIDHLTHFRKDFGLSNNLRAMILRHPELFYVSPKGIRNSVQLVEEFDEKGVLLKRDE 377
K+TL+DHLTHFR++F S LR M++RHP+LFYVS KG R+SV L E + L+ +D
Sbjct: 337 KRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAY-RNSELIDKDP 395
Query: 378 TLLIKEKLMELV 389
L+KEK+ LV
Sbjct: 396 LTLVKEKMRALV 407
>TAIR|locus:2138738 [details] [associations]
symbol:AT4G08940 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0015824 "proline transport"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006979
UniGene:At.33721 InterPro:IPR021099 Pfam:PF11955 EMBL:BT010540
EMBL:AK175286 IPI:IPI00519569 RefSeq:NP_192633.2 UniGene:At.66591
DNASU:826472 EnsemblPlants:AT4G08940.1 GeneID:826472
KEGG:ath:AT4G08940 TAIR:At4g08940 eggNOG:NOG259084
HOGENOM:HOG000243193 InParanoid:Q6NQB8 OMA:LAGTEMN PhylomeDB:Q6NQB8
ProtClustDB:CLSN2680952 Genevestigator:Q6NQB8 Uniprot:Q6NQB8
Length = 395
Score = 228 (85.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 94/388 (24%), Positives = 159/388 (40%)
Query: 5 LSVSSQN-DTFFRCSFFSSTPALIHRNSYSFHQASKKSRNISI-SVTCASPKIVRSPSLD 62
+S SS N + FR S FS T LI + + KK + S+ S K+ P L+
Sbjct: 17 ISSSSPNPNPNFRTSPFS-TSFLITKTPDKLKKKRKKPESARTKSIQHESTKL---PHLE 72
Query: 63 KHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLPKLKSIRSMIHRYPMIFEV 122
+ RF+ + K + +P+ + + K L P+ + + I ++P+IF+
Sbjct: 73 SLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQT 132
Query: 123 FAVPMPPTPLNATKSGYQQCVRLTPXXXXXXXQEISLKSAISNTLANKLQXXXXXXXXXX 182
+ S + + T +E L ++ N ++
Sbjct: 133 YR-----------HSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKR 181
Query: 183 XXXXXXXXXXXXXGLLPNFRSRLCNDYPDKFKIVDTSYG-RALELVSWDPQLAVPMPCAE 241
G+ +FR R+ YPD F++V G R LELV+WD LAV +E
Sbjct: 182 ILLSKIHHTRLLFGIPEDFRDRVAK-YPDYFRVVTGGDGNRVLELVNWDTNLAV----SE 236
Query: 242 TKSLGLIVD----RPLKFXXXXXXXXXXXXXXXXXFLIKFGELPDVCPYNTSSEEFPKES 297
+ L +I + R KF + P V PY+ + S
Sbjct: 237 LERLFMIDEDKAKRVFKFPVKHGKELELEEKDTRKLNL-LNTFPLVSPYS-DGWKLDVWS 294
Query: 298 LQAEKRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLRAMILRHPELFYVSPKGIR 357
L+AEK +V E L + +EK+ I H+ F+ +F L+ M+ + FY++ +
Sbjct: 295 LEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMN 354
Query: 358 NSVQLVEEFDEKGVLLKRDETLLIKEKL 385
+V L + +DE GVL+ +D ++ EKL
Sbjct: 355 WTVFLKDAYDENGVLVSKDPQVVFNEKL 382
>TAIR|locus:2009230 [details] [associations]
symbol:AT1G06440 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016787 EMBL:AC007592
InterPro:IPR021099 Pfam:PF11955 HOGENOM:HOG000243533 EMBL:BT015739
EMBL:BT021137 EMBL:AK228605 IPI:IPI00516223 RefSeq:NP_172132.1
UniGene:At.42341 UniGene:At.74099 EnsemblPlants:AT1G06440.1
GeneID:837156 KEGG:ath:AT1G06440 TAIR:At1g06440 eggNOG:NOG241944
InParanoid:Q9SHI9 OMA:EPNTHIL PhylomeDB:Q9SHI9
ProtClustDB:CLSN2682318 Genevestigator:Q9SHI9 Uniprot:Q9SHI9
Length = 390
Score = 214 (80.4 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 97/365 (26%), Positives = 147/365 (40%)
Query: 44 ISISVTCASPKIV----RSPSLDKHIVTHNRTRFVQKLKTLLLSKPKHYIP---IHILSK 96
I++ T S + V R P +K + + V ++ L L+ P P I LS+
Sbjct: 19 INVRSTTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSR 78
Query: 97 CRSYLSLPKLKSIRSMIHRYPMIFEVFAVPMPPTPLNATKSGYQQCVRLTPXXXXXXXQE 156
L L + S + +YP IF V P+ P C RLT QE
Sbjct: 79 LSQKLHLNR--GAASFLRKYPHIFHVLYDPVKAEPF---------C-RLTDVAMEISRQE 126
Query: 157 ISLKSAISNTLANKLQXXXXXXXXXXXXXXXXXXXXXXXGLLPNFRSRLCNDYPDKFKIV 216
+A + + ++L GL +F + + P FK+
Sbjct: 127 ALAITATLSLVVDRLVRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLS 186
Query: 217 D--TSYGRALELVSWDP-----QLAVPM-PCAETKSLGLIVDRP-LKFXXXXXXXXXXXX 267
D S LELV + + AV E VDR ++F
Sbjct: 187 DGHESNTHILELVQEEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRL 246
Query: 268 XXXXXFLIK-FGELPDVCPYNTSSEEFPKES--LQAEKRACALVREVLGMMVEKQTLIDH 324
+K + LP V PY + S + EKRA A+ E L + VEK ++
Sbjct: 247 SKTFKAKVKEWQRLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEK 306
Query: 325 LTHFRKDFGLSNNLRAMILRHPELFYVSPKGIRNSVQLVEEFDEKGVLLKRDETLLIKEK 384
++HFRK FG+ N+R + L HP +FYVS KG R++V L E + E+G L+ + + K
Sbjct: 307 ISHFRKCFGIDLNIRDLFLDHPGMFYVSTKGKRHTVFLREAY-ERGRLIDPNPVYDARRK 365
Query: 385 LMELV 389
L++LV
Sbjct: 366 LLDLV 370
>TAIR|locus:504955534 [details] [associations]
symbol:RPD1 "ROOT PRIMORDIUM DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010102 "lateral root morphogenesis"
evidence=IMP] GO:GO:0008285 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016787 GO:GO:0010102 InterPro:IPR021099 Pfam:PF11955
EMBL:AB189464 IPI:IPI00532796 RefSeq:NP_680759.1 UniGene:At.31579
STRING:Q689D6 EnsemblPlants:AT4G33495.1 GeneID:829487
KEGG:ath:AT4G33495 TAIR:At4g33495 eggNOG:NOG278294
HOGENOM:HOG000243533 InParanoid:Q689D6 OMA:RARERHY
ProtClustDB:CLSN2690356 Genevestigator:Q689D6 Uniprot:Q689D6
Length = 409
Score = 160 (61.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 54/210 (25%), Positives = 98/210 (46%)
Query: 196 GLLPNFRSRLCNDYPDKFKIVDTSYGRA--LELVSWDPQLAVPMPCA-------ETKSLG 246
GL +F + +P F+++D R +E+V DP L++ CA E ++ G
Sbjct: 178 GLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSI---CAIERVREIEYRTKG 234
Query: 247 LIVDRPLKFXXXXXXXXXXXXXXXXXFLI-KFGELPDVCPYNTSSEEFPKESLQA----E 301
+ + ++F + K+ LP PY S + S++A E
Sbjct: 235 IDAE-DVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISG-YDLRSMEAQNRLE 292
Query: 302 KRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLRAMILRHPELFYVSPKGIRNSVQ 361
KR+ A + E+L + VEK+ ++ + HFR L L+ +L+H +FY+S +G +
Sbjct: 293 KRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLH 352
Query: 362 LV--EEFDEKGVLLKRDETLLIKEKLMELV 389
V E ++G L++ ++ L + +L ELV
Sbjct: 353 TVFLREGYKRGELVEPNDVYLARRRLAELV 382
Score = 85 (35.0 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 56 VRSPSLDKHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLP-KLKSIRSMIH 114
VR D ++ + R V K +L+LS+P H I I +L L L K + +
Sbjct: 47 VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106
Query: 115 RYPMIFEVFAVPM 127
++P +FE++ P+
Sbjct: 107 KFPHVFEIYEHPV 119
>TAIR|locus:2042561 [details] [associations]
symbol:AT2G31290 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002685
GO:GO:0016787 EMBL:AC006593 InterPro:IPR021099 Pfam:PF11955
EMBL:AY074309 EMBL:AY096488 IPI:IPI00529360 PIR:H84718
RefSeq:NP_001031455.1 RefSeq:NP_180687.1 UniGene:At.66418
EnsemblPlants:AT2G31290.1 EnsemblPlants:AT2G31290.2 GeneID:817686
KEGG:ath:AT2G31290 TAIR:At2g31290 InParanoid:Q9SJW7 OMA:EGLHEYN
PhylomeDB:Q9SJW7 ProtClustDB:CLSN2683137 ArrayExpress:Q9SJW7
Genevestigator:Q9SJW7 Uniprot:Q9SJW7
Length = 415
Score = 198 (74.8 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 67/250 (26%), Positives = 110/250 (44%)
Query: 144 RLTPXXXXXXXQEISLKSAISNTLANKLQXXXXXXXXXXXXXXXXXXXXXXXGLLPNFRS 203
RLT +E +K LA++L G ++
Sbjct: 103 RLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVI 162
Query: 204 RLCNDYPDKFKIVDTSYGRA----LELVSWDPQLAVPMPCAETKSLGLIVDRPLKFXXXX 259
R+ Y D F++V+ S GR +EL+ W P+LAV A K G P
Sbjct: 163 RIVPKYSDVFRLVNYS-GRKSSMEIELLLWKPELAVSAVEAAAKKCG---SEP----SFS 214
Query: 260 XXXXXXXXXXXXXFLIKFGELPDVCPYNTSSEEFPKESLQAEKRACALVREVLGMMVEKQ 319
F+ +F P + PY + + S ++EKR+ LV E+L + + K+
Sbjct: 215 CSLPSTWTKPWERFM-EFNAFPYISPYEDHGD-LVEGSKESEKRSVGLVHELLSLTLWKK 272
Query: 320 TLIDHLTHFRKDFGLSNNLRAMILRHPELFYVSPKGIRNSVQLVEEFDEKGVLLKRDETL 379
I L+HF+++FGL L M+L+HP +FYV K ++V L E ++ L+ +D +
Sbjct: 273 LSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHTVILREGYNGSE-LIHKDPLV 331
Query: 380 LIKEKLMELV 389
++K+K EL+
Sbjct: 332 VVKDKFGELM 341
>TAIR|locus:2012981 [details] [associations]
symbol:AT1G71850 "AT1G71850" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
EMBL:CP002684 GO:GO:0005739 GO:GO:0016787 EMBL:AC012654
InterPro:IPR021099 Pfam:PF11955 EMBL:AK226624 IPI:IPI00528408
PIR:B96741 RefSeq:NP_177330.1 UniGene:At.52483 STRING:Q9M9G1
PRIDE:Q9M9G1 EnsemblPlants:AT1G71850.1 GeneID:843515
KEGG:ath:AT1G71850 TAIR:At1g71850 InParanoid:Q9M9G1 OMA:DITEKRT
PhylomeDB:Q9M9G1 ProtClustDB:CLSN2720513 Genevestigator:Q9M9G1
Uniprot:Q9M9G1
Length = 470
Score = 190 (71.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 73/348 (20%), Positives = 147/348 (42%)
Query: 54 KIVRSPSLDKHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLPKLKSIRSMI 113
K VR LD + R + +K L+ S+P +PI +++ + L +P L+ I I
Sbjct: 30 KFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVP-LRPIE-FI 87
Query: 114 HRYPMIFEVFAVPMPPTPLNATKSGYQQCVRLTPXXXXXXXQE--ISLKSAISNTLANKL 171
+P +F+ F P + G + LTP E + LA++L
Sbjct: 88 RSFPSVFQEFL----PGGI-----GIHPHISLTPEILNHDADEQLVYGSETYKQGLADRL 138
Query: 172 QXXXXXXXXXXXXXXXXXXXXXXXGLLPNFRSRLCNDYPDKFKIVDTSY---GRALELVS 228
GL ++ + ++PD F+++ + LELV
Sbjct: 139 LKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVC 198
Query: 229 WDPQLAVPMPCAETKSL-------GLIVDRPLKFXXXXXXXXXXXXXXXXXFLIKFGELP 281
W + AV + + ++L G + P+KF ++ + +LP
Sbjct: 199 WSNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKK-----WIDDWQKLP 253
Query: 282 DVCPYNTSSEEFPKESLQAEKRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLRAM 341
+ PY + S +++K A A++ E++ + V K+ D + H + GL + + +
Sbjct: 254 YISPYENALH-LSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRV 312
Query: 342 ILRHPELFYVSPKGIRNSVQLVEEFDEKGVLLKRDETLLIKEKLMELV 389
+ HP +FY+S K +R ++ + ++G+L++ +E + + + M+L+
Sbjct: 313 LHNHPGIFYLSSK-LRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLM 359
>TAIR|locus:2064940 [details] [associations]
symbol:WTF9 "AT2G39120" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000373
"Group II intron splicing" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0017004 "cytochrome complex assembly"
evidence=IMP] GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0017004 GO:GO:0003723 GO:GO:0016787 EMBL:AC005770
GO:GO:0000373 InterPro:IPR021099 Pfam:PF11955 UniGene:At.13254
UniGene:At.66409 IPI:IPI00547936 PIR:D84813 RefSeq:NP_181445.1
PaxDb:Q9ZUZ6 PRIDE:Q9ZUZ6 EnsemblPlants:AT2G39120.1 GeneID:818498
KEGG:ath:AT2G39120 TAIR:At2g39120 eggNOG:NOG247058
HOGENOM:HOG000240474 InParanoid:Q9ZUZ6 OMA:IIRCRRS PhylomeDB:Q9ZUZ6
ProtClustDB:CLSN2683245 ArrayExpress:Q9ZUZ6 Genevestigator:Q9ZUZ6
Uniprot:Q9ZUZ6
Length = 387
Score = 178 (67.7 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 79/338 (23%), Positives = 133/338 (39%)
Query: 57 RSPSLD--KHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLPKLKSIRSMIH 114
R P D +HI+ ++ + V LK ++ +P IPI +SK + I +
Sbjct: 33 RDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVST--KIAHFLR 90
Query: 115 RYPMIFEVFAVPMPPTPLNATKSGYQQCVRLTPXXXXXXXQEISLKSAISNTLANKLQXX 174
++P IFE F P P RLTP QE + ++ L ++L+
Sbjct: 91 KFPSIFEEFVGPEYNLPW----------FRLTPEATELDRQERVVYQTSADDLRDRLKKL 140
Query: 175 XXXXXXXXXXXXXXXXXXXXXGLLPNFRSRLCNDYPDKFKIVDTS---YGRALELVSWDP 231
GL ++ + F+ VD G A++ D
Sbjct: 141 ILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDK 200
Query: 232 QLAVPMPCAETKSLGLIVDRPLKFXXXXXXXXXXXXXXXXXFLIKFGELPDVCPYNTSSE 291
L+V A K G + ++F +L++F +LP V PY+ S
Sbjct: 201 VLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIED-WLMEFQKLPYVSPYDDYSC 259
Query: 292 EFPKESLQAEKRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLRAMILRHPELFYV 351
P + AEKR + E+L + VE L +K FGL + RHP++FY+
Sbjct: 260 LDPSSDI-AEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYL 318
Query: 352 SPKGIRNSVQLVEEFDEKGVLLKRDETLLIKEKLMELV 389
S K + L E + +K + + L +++K ++L+
Sbjct: 319 SMKNKTCTAILREPYRDKASV-ETHPVLGVRKKYIQLM 355
>TAIR|locus:2207380 [details] [associations]
symbol:AT1G79120 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016787 EMBL:AC002986
InterPro:IPR021099 Pfam:PF11955 EMBL:AY773833 IPI:IPI00522769
PIR:T01043 RefSeq:NP_178033.1 UniGene:At.50886 PRIDE:O64539
EnsemblPlants:AT1G79120.1 GeneID:844253 KEGG:ath:AT1G79120
TAIR:At1g79120 eggNOG:NOG279247 HOGENOM:HOG000240299
InParanoid:O64539 OMA:VFLKEAY PhylomeDB:O64539
ProtClustDB:CLSN2679815 ArrayExpress:O64539 Genevestigator:O64539
Uniprot:O64539
Length = 413
Score = 124 (48.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 72/349 (20%), Positives = 137/349 (39%)
Query: 57 RSPSLDKHIVTHNRTRFVQKLKTLLLSKPKHYIPIHILSKCRSYLSLPKLKSIRSMIHRY 116
R LDK I + + + +LK+++ ++ KH +L ++ ++ + I +Y
Sbjct: 64 RVHDLDKAIDLNKKPSLILQLKSIIQAQ-KH--GSLLLRDLEKHVGFVHKWNLMAAIEKY 120
Query: 117 PMIFEVFAVPMPPTPLNATKSGYQQCVRLTPXXXXXXXQEISLKSAISNTLANKLQXXXX 176
P IF V P P V LT +E ++ L N L+
Sbjct: 121 PTIFYVGGGHKEP-PF----------VMLTEKAKKIAAEESEATESMEPILVNNLRKLLM 169
Query: 177 XXXXXXXXXXXXXXXXXXXGLLPNFRSRLCNDYPDKF--KIVDTSYGRALELVSWDPQLA 234
GL +F+S L Y + F K+++ LE +WD LA
Sbjct: 170 MSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLE--NWDSSLA 227
Query: 235 VPMP----CAE--TKSLG----LIVDRPLKFXXXXXXXXXX--XXXXXXXFLIKFGELPD 282
+ E ++S+G + + + F +L +F +
Sbjct: 228 ITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQK 287
Query: 283 V---CPYNTSSEEFPKESLQAEKRACALVREVLGMMVEKQTLIDHLTHFRKDFGLSNNLR 339
+ PY ++ F +A KR A++ E+L + +EK+ L F ++ L + L
Sbjct: 288 MEFPSPY-LNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLI 346
Query: 340 AMILRHPELFYVSPKGIRNSVQLVEEFDEKGVLLKRDETLLIKEKLMEL 388
+++H +FY++ KG R +V L + + L+++ LL ++ + L
Sbjct: 347 LCLIKHQGIFYITNKGARGTVFLKDAYAGSN-LIEKCPLLLFHDRFVAL 394
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 482 404 0.00099 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 619 (66 KB)
Total size of DFA: 267 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.82u 0.12s 28.94t Elapsed: 00:00:01
Total cpu time: 28.82u 0.12s 28.94t Elapsed: 00:00:01
Start: Tue May 21 00:02:16 2013 End: Tue May 21 00:02:17 2013