BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045481
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 162 bits (411), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 109/157 (69%), Gaps = 1/157 (0%)
Query: 3 KIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILDLY 62
K+ ++NLQVTFSKRR+G+FKKASEL TLCG ++A++VFSP K FSFGHPNVDS++D +
Sbjct: 15 KMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRF 74
Query: 63 LARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIR-KASCRQ 121
+ NP PP + + +L E RN+ +++LN LTQVL QLE EKK + L +IR K
Sbjct: 75 INNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKIREKTKALG 134
Query: 122 CWWEAPINELGLHELEQLKTAMEELKKNVEQQANKIL 158
WWE P+ EL L +LE K +E LKK V +A++
Sbjct: 135 NWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFF 171
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 154 bits (388), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 110/151 (72%), Gaps = 7/151 (4%)
Query: 3 KIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILDLY 62
KI K+++ QVTFSKRRAG+FKKASEL TLCG +I +IVFSPA K FSFGHP+V+S+LD Y
Sbjct: 71 KIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRY 130
Query: 63 LARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCRQC 122
++RN ++S ++ A+ ELNMQLT +L ++E EKK G+ + E+RK S R+
Sbjct: 131 VSRNNMSLAQSQQ---LQGSPAASC-ELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRS 186
Query: 123 ---WWEAPINELGLHELEQLKTAMEELKKNV 150
WWE P+ E+ + +L+++K A+EEL+K V
Sbjct: 187 MINWWEKPVEEMNMVQLQEMKYALEELRKTV 217
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 28/163 (17%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSIL- 59
I KI QVTFSKRR G+FKKA ELS LC D+ALI+FS K F + ++ IL
Sbjct: 8 IKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILE 67
Query: 60 --DLYLARNPNPPSESSTD-RLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRK 116
DL+ ++N + S + +L+E N+N L+ ++++ H+L
Sbjct: 68 RRDLH-SKNLEKLDQPSLELQLVE---NSNYSRLSKEISEKSHRL--------------- 108
Query: 117 ASCRQCWWEAPINELGLHELEQLKTAMEE-LKKNVEQQANKIL 158
RQ E + L + EL+QL+ ++E L + +E++ +KI+
Sbjct: 109 ---RQMRGE-ELQGLNIEELQQLERSLETGLSRVIERKGDKIM 147
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I QVTFSKRR G+FKKA ELS LC D+ALIVFS K F +++ I+D
Sbjct: 8 IKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIID 67
Query: 61 LY------LARNPNPPSESSTDRLIEAHRNANIRELNMQLTQV 97
Y L + P + + + AH N + E +++L Q+
Sbjct: 68 KYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQM 110
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 86/162 (53%), Gaps = 24/162 (14%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I + QVTFSKRR+G+FKKA ELS LC ++ L+VFS ++ + F ++ SI++
Sbjct: 8 IKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIE 67
Query: 61 LY--LARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKAS 118
Y +P+ +S++ + A++R Q LH L ++ H ++L +
Sbjct: 68 RYNETKEDPHQTMNASSEAKLWQQEAASLR-------QQLHNL--QEYHRQLLGQ----- 113
Query: 119 CRQCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKILID 160
++ L + +L+ L++ +E KN+ + + +++D
Sbjct: 114 --------QLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMD 147
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I KI QVTFSKRR G+FKKA ELS LC D+ALI+FS K F F + IL
Sbjct: 8 IKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILG 67
Query: 61 LYL--ARNPN----PPS 71
Y A N N PPS
Sbjct: 68 RYSLHASNINKLMDPPS 84
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I KI QVTFSKRR G+FKKA ELS LC D+ALI+FS K F F ++ +L+
Sbjct: 8 IRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLE 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCR 120
+ ++ N ++ N++ ++ ++ H+L R
Sbjct: 68 RHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRL------------------R 109
Query: 121 QCWWEAPINELGLHELEQLKTAMEE-LKKNVEQQANKIL 158
Q E + L + EL+QL+ A+E L + +E +++KI+
Sbjct: 110 QMRGE-ELQGLDIEELQQLEKALETGLTRVIETKSDKIM 147
>sp|P40791|MEF2_DROME Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster
GN=Mef2 PE=1 SV=3
Length = 540
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
IS+I + N QVTF+KR+ GV KKA ELS LC +IALI+FS +NK + + ++D +L
Sbjct: 8 ISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLL 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNAN 86
Y N P ES T++ I N N
Sbjct: 68 KYTEY--NEPHESLTNKNIIEKENKN 91
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N QVTF KRR G+ KKA ELS LC ++ALIVFS + + + + +V S ++
Sbjct: 8 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVE 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCR 120
Y N + S S T + E+N Q H + K + +S ++ A+ R
Sbjct: 68 RYKKANSD-TSNSGT-----------VAEVNAQ-----HYQQESSKLRQQISSLQNANSR 110
Query: 121 QCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKIL 158
++ IN + L +L+Q++ +E+ + + N++L
Sbjct: 111 TIVGDS-INTMSLRDLKQVENRLEKGIAKIRARKNELL 147
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 11 QVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILDLYLARNPN 68
QVTFSKRR G+FKKA EL+ LC D+AL+VFS K F N++ I+D Y + N
Sbjct: 18 QVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKN 75
>sp|P35632|AP3_ARATH Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3
PE=1 SV=1
Length = 232
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDS--I 58
I +I + N QVT+SKRR G+FKKA EL+ LC +++I+FS +NK + PN + I
Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEI 67
Query: 59 LDLYLARNPNPPSESSTDRLIEAHR-----NANIR-ELNMQLTQVLHQLEVEK 105
+DLY + + +R+ E R N N+R ++ +L + L +L++++
Sbjct: 68 VDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE 120
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I + QVTFSKRR G+ KKA ELS LC +++LI+FSP K + F N+ +D
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTID 67
Query: 61 LYLARNPNPPS 71
YL + S
Sbjct: 68 RYLRHTKDRVS 78
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFG-HPNVDSIL 59
+ +I K N QVTFSKRRAG+FKKA E+S LC ++AL+VFS K F + P ++ IL
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDPCMEKIL 67
Query: 60 DLY 62
+ Y
Sbjct: 68 ERY 70
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 11 QVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILDLY 62
QVTFSKRR G+FKKA ELS LC ++ L+VFS K F F +++ I+D Y
Sbjct: 37 QVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRY 88
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 18/164 (10%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRR G+ KKA ELS LC ++ALI+FS K + FG ++ L+
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLE 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCR 120
Y + N ++ S L + +E++ +L L L+ ++H +L E
Sbjct: 68 KYNSCCYN--AQGSNSALAGGEHQSWYQEMS-RLKTKLECLQRSQRH--MLGE------- 115
Query: 121 QCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKILIDSKNN 164
+ L + EL+QL+ +E Q+ +I+++ ++
Sbjct: 116 ------DLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDD 153
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRR G+ KKA ELS LC ++ALI+FS K + FG ++S ++
Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIE 67
Query: 61 LY 62
Y
Sbjct: 68 RY 69
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRR G+ KKA ELS LC ++ALI+FS K + FG + L+
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLE 67
Query: 61 LY 62
Y
Sbjct: 68 RY 69
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N QVTFSKRR G+ KKA EL+ LC D+ LIVFS + + F ++ SI++
Sbjct: 8 IKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIE 67
Query: 61 LYL------ARNPNPPSES 73
Y R NP SE+
Sbjct: 68 RYQEAGEEHCRLLNPMSEA 86
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSF-GHPNVDSIL 59
+ +I K N QVTFSKRR G+ KKA E+S LC D+ALIVFS K + F H +++ IL
Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGIL 67
Query: 60 DLY 62
+ Y
Sbjct: 68 ERY 70
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSF-GHPNVDSIL 59
+ +I K N QVTFSKRR G+ KKA E+S LC D+ALIVFS K + F H +++ IL
Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGIL 67
Query: 60 DLY 62
+ Y
Sbjct: 68 ERY 70
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I + QVTFSKRR G+ KKA ELS LC ++ L+VFS + + F N+ +++D
Sbjct: 8 IRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVID 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCR 120
Y ++T + R A L Q LH L ++ H +++ E
Sbjct: 68 RYTNAKEELLGGNATSEIKIWQREA------ASLRQQLHNL--QESHKQLMGE------- 112
Query: 121 QCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKIL 158
++ LG+ +L+ L+ +E +N+ + + +L
Sbjct: 113 ------ELSGLGVRDLQGLENRLEISLRNIRMRKDNLL 144
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+FKKA E+S LC ++AL+VFS K F + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYS---TDSCME 64
Query: 61 LYLAR 65
L R
Sbjct: 65 KILER 69
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N QVTF KRR+G+ KKA ELS LC ++AL+VFS + + + + +V ++
Sbjct: 50 IKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIE 109
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLT 95
Y N + + S+ + H +L Q+T
Sbjct: 110 RYKKANSDTSNASTVAEINAQHYQQEAAKLKQQIT 144
>sp|A2ICN5|MEF2A_PIG Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2
SV=2
Length = 507
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ +NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEA-----HRNANIRELNMQLTQVLHQLEVEKKHGE 109
Y N P ES T+ ++EA HR + + + H E KK E
Sbjct: 68 KYTEY--NEPHESGTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
>sp|Q2KIA0|MEF2C_BOVIN Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2
SV=1
Length = 441
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEAHR----NANIRELNMQLTQVLHQLEVEKKHGEVLSEIR 115
Y N P ES T+ ++E R N V H E E K+ ++ +I
Sbjct: 68 KYTEY--NEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKINEDID 125
Query: 116 KASCRQCWWEAP 127
RQ P
Sbjct: 126 LMISRQRLCAVP 137
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+FKKA E+S LC ++AL+VFS K F + + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEY---STDSCME 64
Query: 61 LYLAR 65
L R
Sbjct: 65 KILER 69
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+FKKA E+S LC ++AL+VFS K F + + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEY---STDSCME 64
Query: 61 LYLAR 65
L R
Sbjct: 65 KILER 69
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+FKKA E+S LC ++AL+VFS K F + + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEY---STDSCME 64
Query: 61 LYLAR 65
L R
Sbjct: 65 KILER 69
>sp|Q8CFN5|MEF2C_MOUSE Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1
SV=2
Length = 474
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEAHR----NANIRELNMQLTQVLHQLEVEKKHGEVLSEIR 115
Y N P ES T+ ++E R N V H E E K+ ++ +I
Sbjct: 68 KYTEY--NEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKINEDID 125
Query: 116 KASCRQ--CWWEAPINEL 131
RQ C P E+
Sbjct: 126 LMISRQRLCAVPPPSFEM 143
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 19/159 (11%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N QVTF KRR G+ KKA ELS LC ++ALIVFS + + + + +V ++
Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIE 83
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCR 120
Y + P+ SS + E N Q +Q E K E+ S I+K + R
Sbjct: 84 RYKKACTDSPNTSS------------VSEANAQ----FYQQEASKLRQEI-SSIQKNN-R 125
Query: 121 QCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKILI 159
E+ + L + +L+ L+T +E+ + + N++L
Sbjct: 126 NMMGES-LGSLTVRDLKGLETKLEKGISRIRSKKNELLF 163
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRR+G+ KKA E+S LC ++ALIVFS K F + + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY---STDSCME 64
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKASCR 120
L R DR + + + R+++ VL ++ K EVL + ++
Sbjct: 65 RILER---------YDRYLYSDKQLVGRDVSQSENWVLEHAKL-KARVEVLEKNKRN--- 111
Query: 121 QCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKILIDS 161
+ ++ L L EL+ L+ ++ K++ + N+ + +S
Sbjct: 112 --FMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFES 150
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I + QVTFSKRR G+ KKA EL+ LC ++ LI+FS K + F ++ S++D
Sbjct: 8 IQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVID 67
Query: 61 LY 62
Y
Sbjct: 68 RY 69
>sp|Q5R444|MEF2C_PONAB Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2
SV=1
Length = 473
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEAHR----NANIRELNMQLTQVLHQLEVEKKHGEVLSEIR 115
Y N P ES T+ ++E R N V H E E K+ ++ +I
Sbjct: 68 KYTEY--NEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKINEDID 125
Query: 116 KASCRQCWWEAP 127
RQ P
Sbjct: 126 LMISRQRLCAVP 137
>sp|Q06413|MEF2C_HUMAN Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1
SV=1
Length = 473
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEAHR----NANIRELNMQLTQVLHQLEVEKKHGEVLSEIR 115
Y N P ES T+ ++E R N V H E E K+ ++ +I
Sbjct: 68 KYTEY--NEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESEDKYRKINEDID 125
Query: 116 KASCRQCWWEAP 127
RQ P
Sbjct: 126 LMISRQRLCAVP 137
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N+ QVTFSKRRAG+ KKA ELS LC ++A+IVFS + K F F ++ L
Sbjct: 8 IKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLL 67
Query: 61 LY 62
Y
Sbjct: 68 RY 69
>sp|Q02078|MEF2A_HUMAN Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1
SV=1
Length = 507
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ +NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEA-----HRNANIRELNMQLTQVLHQLEVEKKHGE 109
Y N P ES T+ ++EA HR + + + H E KK E
Sbjct: 68 KYTEY--NEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSF-GHPN-VDSI 58
+ +I K + QVTFSKRRAG+ KK ELS LC I LI+FS K F + P+ + I
Sbjct: 11 VKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQI 70
Query: 59 LDLYL-ARNPNPPSESSTDRLIEAHRNANIRELNMQLTQVLHQLEVEKKHGEVLSEIRKA 117
+ YL + P E + +L + LN+QL+ L+ K L++ +
Sbjct: 71 ISRYLQTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLS-----LQRYKGDDLSLAQYEEL 125
Query: 118 SCRQCWWEAPINELGLHELEQLKTAMEELKK 148
+ + E +N++ +LE ++ ME LKK
Sbjct: 126 NELEKQLEHALNKIRARKLELMQQQMENLKK 156
>sp|Q2MJT0|MEF2A_RAT Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a
PE=1 SV=1
Length = 495
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ +NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEA-----HRNANIRELNMQLTQVLHQLEVEKKHGE 109
Y N P ES T+ ++EA HR + + + H E KK E
Sbjct: 68 KYTEY--NEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
>sp|A2VDZ3|MEF2A_BOVIN Myocyte-specific enhancer factor 2A OS=Bos taurus GN=MEF2A PE=2
SV=1
Length = 492
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I++I + N QVTF+KR+ G+ KKA ELS LC +IALI+F+ +NK F + ++D +L
Sbjct: 8 ITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLL 67
Query: 61 LYLARNPNPPSESSTDR-LIEA-----HRNANIRELNMQLTQVLHQLEVEKKHGE 109
Y N P ES T+ ++EA HR + + + H E KK E
Sbjct: 68 KYTEY--NEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINE 120
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N+ QVTFSKRR+G+ KKA ELS LC ++A+IVFS + K F + + L
Sbjct: 8 IKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLS 67
Query: 61 LYLARNPNPPSESSTD 76
Y + S++ D
Sbjct: 68 RYGNHQSSSASKAEED 83
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I N QVTF KRR G+ KKA ELS LC ++ALIVFS + + + + N+ S ++
Sbjct: 8 IKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIE 67
Query: 61 LY 62
Y
Sbjct: 68 RY 69
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I KI N+ QVTFSKRR G+ KKA ELS LC ++ALI+FS K + F ++ IL
Sbjct: 8 IKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVCMEQILS 67
Query: 61 LY 62
Y
Sbjct: 68 RY 69
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+ KKA E+S LC ++AL+VFS K F + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYS---TDSCME 64
Query: 61 LYLARNPN----------PPSESSTDRLIEAHR 83
L R P S+S+T+ +E +R
Sbjct: 65 KILERYERYSYAERQLIAPESDSNTNWSMEYNR 97
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+ KKA E+S LC ++AL+VFS K F + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYS---TDSCME 64
Query: 61 LYLARNPN----------PPSESSTDRLIEAHR 83
L R P S+S+T+ +E +R
Sbjct: 65 KILERYERYSYAERQLIAPESDSNTNWSMEYNR 97
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+ KKA E+S LC ++AL+VFS K F + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYS---TDSCME 64
Query: 61 LYLARNPN----------PPSESSTDRLIEAHR 83
L R P S+S+T+ +E +R
Sbjct: 65 KILERYERYSYAERQLIAPESDSNTNWSMEYNR 97
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 28/164 (17%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
I +I + QVTFSKRR G+FKKA EL+ LC ++ L++FS + + + ++ S++D
Sbjct: 8 IRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVID 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNANI----RELNMQLTQVLHQLEVEKKHGEVLSEIRK 116
Y +S ++ A+ N+ + RE L Q LH L ++ H +++ E
Sbjct: 68 RY--------GKSKDEQQAVANPNSELKFWQREA-ASLRQQLHNL--QENHRQLMGE--- 113
Query: 117 ASCRQCWWEAPINELGLHELEQLKTAMEELKKNVEQQANKILID 160
++ L + EL+ L+ +E ++V + + +LID
Sbjct: 114 ----------DLSGLNVKELQSLENQLEISLRSVRTKKDHVLID 147
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I + QVTFSKRR G+ KKA ELS LC ++AL++FSP +K + F ++ + ++
Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIE 67
Query: 61 LYLARNPNPPSESSTDRLIEAHRNAN---IRELNMQLTQVLHQLEVEKK 106
Y R + RN N R+ LT+ + QLE+ K+
Sbjct: 68 RYQRRIKEIGNNH--------KRNDNSQQARDETSGLTKKIEQLEISKR 108
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFG-HPNVDSIL 59
+ +I K N QVTFSKRR G+ KKA E+S LC ++A IVFSP K + + +D IL
Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKIL 67
Query: 60 DLY 62
+ Y
Sbjct: 68 ERY 70
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+ KKA E+S LC ++AL+VFS K F + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYS---TDSCME 64
Query: 61 LYLAR 65
L R
Sbjct: 65 KILER 69
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 1 ISKIPKKNNLQVTFSKRRAGVFKKASELSTLCGVDIALIVFSPANKAFSFGHPNVDSILD 60
+ +I K N QVTFSKRRAG+ KKA E+S LC ++AL+VFS K F + DS ++
Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYS---TDSCME 64
Query: 61 LYLAR 65
L R
Sbjct: 65 KILER 69
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,105,413
Number of Sequences: 539616
Number of extensions: 2374093
Number of successful extensions: 8930
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 8727
Number of HSP's gapped (non-prelim): 223
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)