AmiGO: BLAST Results


BLAST match view associations BLAST with AT2G44065 AT2G44065 AT2G44065	protein from Arabidopsis thaliana	2.8e-18
BLAST match view associations BLAST with GSU_2854 GSU_2854 GSU_2854 ribosomal protein L2	protein from Geobacter sulfurreducens PCA	2.3e-13
BLAST match view associations BLAST with CPS_0870 CPS_0870 CPS_0870 ribosomal protein L2	protein from Colwellia psychrerythraea 34H	9.2e-13
BLAST match view associations BLAST with RPL2 RPL2 RPL2 60S ribosomal protein L2, mitochondrial	protein from Oryza sativa	3.5e-12
BLAST match view associations BLAST with RPL2 RPL2 RPL2 60S ribosomal protein L2, mitochondrial	protein from Oryza sativa Japonica Group	3.5e-12
BLAST match view associations BLAST with RPL2 RPL2 RPL2 60S ribosomal protein L2, mitochondrial	protein from Oryza sativa Indica Group	3.5e-12
BLAST match view associations BLAST with CHY_2306 CHY_2306 CHY_2306 ribosomal protein L2	protein from Carboxydothermus hydrogenoformans Z-2901	3.6e-12
BLAST match view associations BLAST with APH_0283 APH_0283 APH_0283 ribosomal protein L2	protein from Anaplasma phagocytophilum HZ	3.8e-12
BLAST match view associations BLAST with ECH_0412 ECH_0412 ECH_0412 ribosomal protein L2	protein from Ehrlichia chaffeensis str. Arkansas	1.1e-11
BLAST match view associations BLAST with SO_0234 SO_0234 SO_0234 ribosomal protein L2	protein from Shewanella oneidensis MR-1	3.1e-11
BLAST match view associations BLAST with CBU_0241 CBU_0241 CBU_0241 ribosomal protein L2	protein from Coxiella burnetii RSA 493	5.3e-11
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Vibrio cholerae O1 biovar El Tor str. N16961	6.9e-11
BLAST match view associations BLAST with VC_2593 VC_2593 VC_2593 ribosomal protein L2	protein from Vibrio cholerae O1 biovar El Tor	6.9e-11
BLAST match view associations BLAST with NSE_0269 NSE_0269 NSE_0269 ribosomal protein L2	protein from Neorickettsia sennetsu str. Miyayama	9.6e-11
BLAST match view associations BLAST with rplB rplB rplB	gene from Escherichia coli K-12	1.1e-10
BLAST match view associations BLAST with BA_0113 BA_0113 BA_0113 ribosomal protein L2	protein from Bacillus anthracis str. Ames	2.0e-10
BLAST match view associations BLAST with PF11_0337 PF11_0337 PF11_0337 50S ribosomal protein L2, putative	gene from Plasmodium falciparum	2.9e-10
BLAST match view associations BLAST with PF11_0337 PF11_0337 PF11_0337 Mitochondrial ribosomal protein L2	protein from Plasmodium falciparum 3D7	2.9e-10
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Streptomyces collinus	1.7e-09
BLAST match view associations BLAST with RML2 RML2 RML2 Mitochondrial ribosomal protein of the large subunit	gene from Saccharomyces cerevisiae	2.4e-09
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Mycobacterium tuberculosis	4.8e-09
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Streptomyces coelicolor A3(2)	1.0e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza sativa	1.3e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza sativa Indica Group	1.3e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza sativa Japonica Group	1.3e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza nivara	1.3e-08
BLAST match view associations BLAST with CJE_1872 CJE_1872 CJE_1872 ribosomal protein L2	protein from Campylobacter jejuni RM1221	1.3e-08
BLAST match view associations BLAST with SPO_0484 SPO_0484 SPO_0484 ribosomal protein L2	protein from Ruegeria pomeroyi DSS-3	6.4e-08

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045484
        (179 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006316 - symbol:AT2G44065 species:3702 "Ara...   221  2.8e-18   1
TIGR_CMR|GSU_2854 - symbol:GSU_2854 "ribosomal protein L2...   175  2.3e-13   1
TIGR_CMR|CPS_0870 - symbol:CPS_0870 "ribosomal protein L2...   170  9.2e-13   1
UNIPROTKB|P0C8K6 - symbol:RPL2 "60S ribosomal protein L2,...   172  3.5e-12   1
UNIPROTKB|P92812 - symbol:RPL2 "60S ribosomal protein L2,...   172  3.5e-12   1
UNIPROTKB|Q2F969 - symbol:RPL2 "60S ribosomal protein L2,...   172  3.5e-12   1
TIGR_CMR|CHY_2306 - symbol:CHY_2306 "ribosomal protein L2...   165  3.6e-12   1
TIGR_CMR|APH_0283 - symbol:APH_0283 "ribosomal protein L2...   165  3.8e-12   1
TIGR_CMR|ECH_0412 - symbol:ECH_0412 "ribosomal protein L2...   161  1.1e-11   1
TIGR_CMR|SO_0234 - symbol:SO_0234 "ribosomal protein L2" ...   157  3.1e-11   1
TIGR_CMR|CBU_0241 - symbol:CBU_0241 "ribosomal protein L2...   155  5.3e-11   1
UNIPROTKB|Q9KNY7 - symbol:rplB "50S ribosomal protein L2"...   154  6.9e-11   1
TIGR_CMR|VC_2593 - symbol:VC_2593 "ribosomal protein L2" ...   154  6.9e-11   1
TIGR_CMR|NSE_0269 - symbol:NSE_0269 "ribosomal protein L2...   153  9.6e-11   1
UNIPROTKB|P60422 - symbol:rplB species:83333 "Escherichia...   152  1.1e-10   1
TIGR_CMR|BA_0113 - symbol:BA_0113 "ribosomal protein L2" ...   150  2.0e-10   1
GENEDB_PFALCIPARUM|PF11_0337 - symbol:PF11_0337 "50S ribo...   134  2.9e-10   2
UNIPROTKB|Q8II37 - symbol:PF11_0337 "Mitochondrial riboso...   134  2.9e-10   2
UNIPROTKB|Q9AMK8 - symbol:rplB "50S ribosomal protein L2"...   142  1.7e-09   1
SGD|S000000776 - symbol:RML2 "Mitochondrial ribosomal pro...   144  2.4e-09   1
UNIPROTKB|P95052 - symbol:rplB "50S ribosomal protein L2"...   138  4.8e-09   1
UNIPROTKB|Q9L0D7 - symbol:rplB "50S ribosomal protein L2"...   135  1.0e-08   1
UNIPROTKB|P0C495 - symbol:rpl2-A "50S ribosomal protein L...   134  1.3e-08   1
UNIPROTKB|P0C496 - symbol:rpl2-A "50S ribosomal protein L...   134  1.3e-08   1
UNIPROTKB|P0C497 - symbol:rpl2-A "50S ribosomal protein L...   134  1.3e-08   1
UNIPROTKB|Q6EN83 - symbol:rpl2-A "50S ribosomal protein L...   134  1.3e-08   1
TIGR_CMR|CJE_1872 - symbol:CJE_1872 "ribosomal protein L2...   134  1.3e-08   1
TIGR_CMR|SPO_0484 - symbol:SPO_0484 "ribosomal protein L2...   128  6.4e-08   1
POMBASE|SPCC16C4.15 - symbol:rml2 "mitochondrial ribosoma...   121  3.9e-06   1
ASPGD|ASPL0000011317 - symbol:AN3649 species:162425 "Emer...   112  0.00014   1


>TAIR|locus:505006316 [details] [associations]
            symbol:AT2G44065 species:3702 "Arabidopsis thaliana"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
            evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
            [GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            InterPro:IPR002171 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:CP002685
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC004005
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
            PANTHER:PTHR13691 HSSP:P04257 EMBL:AY063831 EMBL:AY091281
            IPI:IPI00538697 RefSeq:NP_566007.1 RefSeq:NP_973685.1
            UniGene:At.175 ProteinModelPortal:Q8VZU4 SMR:Q8VZU4 IntAct:Q8VZU4
            STRING:Q8VZU4 PRIDE:Q8VZU4 EnsemblPlants:AT2G44065.1
            EnsemblPlants:AT2G44065.2 GeneID:819012 KEGG:ath:AT2G44065
            TAIR:At2g44065 InParanoid:Q8VZU4 OMA:NIEMNPG PhylomeDB:Q8VZU4
            ProtClustDB:CLSN2688921 ArrayExpress:Q8VZU4 Genevestigator:Q8VZU4
            Uniprot:Q8VZU4
        Length = 214

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 44/73 (60%), Positives = 50/73 (68%)

Query:    96 SHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCK 155
             SH  K L KAGQS WLG RP +RGV MNP DHP        KSSG+ GR S++PWGKPCK
Sbjct:   133 SHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWGKPCK 192

Query:   156 W-CKTASRKKKRK 167
                K+AS KKK+K
Sbjct:   193 GGYKSASVKKKKK 205


>TIGR_CMR|GSU_2854 [details] [associations]
            symbol:GSU_2854 "ribosomal protein L2" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
            PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:AE017180
            GenomeReviews:AE017180_GR GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
            InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
            HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
            ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:NP_953897.1
            ProteinModelPortal:P60401 SMR:P60401 GeneID:2685862
            KEGG:gsu:GSU2854 PATRIC:22028555
            BioCyc:GSUL243231:GH27-2828-MONOMER Uniprot:P60401
        Length = 274

 Score = 175 (66.7 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 41/92 (44%), Positives = 50/92 (54%)

Query:    78 EVACHLLVCMLGPSST-TLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXX 136
             EV   LL CM        + HE   + KAG+S WLG+RP +RGV MNPVDHP        
Sbjct:   180 EVRMVLLDCMATIGQVGNIDHENVSIGKAGRSRWLGRRPKVRGVAMNPVDHPHGGGEG-- 237

Query:   137 KSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
             ++SG  GR  +TPWG P K  KT   K   +F
Sbjct:   238 RTSG--GRHPVTPWGIPTKGYKTRKNKTSTRF 267


>TIGR_CMR|CPS_0870 [details] [associations]
            symbol:CPS_0870 "ribosomal protein L2" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            RefSeq:YP_267619.1 ProteinModelPortal:Q487Z6 SMR:Q487Z6
            STRING:Q487Z6 PRIDE:Q487Z6 GeneID:3519963 KEGG:cps:CPS_0870
            PATRIC:21465033 BioCyc:CPSY167879:GI48-956-MONOMER Uniprot:Q487Z6
        Length = 274

 Score = 170 (64.9 bits), Expect = 9.2e-13, P = 9.2e-13
 Identities = 41/93 (44%), Positives = 50/93 (53%)

Query:    76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXX 135
             K+E  C   +  +G S     H  + L KAG S W G RP +RGV MNPVDHP       
Sbjct:   183 KIESDCRATLGEIGNSE----HMLRSLGKAGASRWRGVRPTVRGVAMNPVDHPHGGGEG- 237

Query:   136 XKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
              K+SG  GR  ++PWG P K  KT S K+  KF
Sbjct:   238 -KTSG--GRHPVSPWGVPTKGYKTRSNKRTDKF 267


>UNIPROTKB|P0C8K6 [details] [associations]
            symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
            species:4530 "Oryza sativa" [GO:0005739 "mitochondrion"
            evidence=IC] InterPro:IPR002171 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            EMBL:DQ167807 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_002000581.1
            ProteinModelPortal:P0C8K6 PRIDE:P0C8K6 GeneID:6450181
            KEGG:osa:6450181 Gramene:P0C8K6 HOGENOM:HOG000150660
            Genevestigator:P0C8K6 Uniprot:P0C8K6
        Length = 502

 Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query:    96 SHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCK 155
             +H A+ LRKAGQS W G+RP++RGV MNPVDHP        K     GR S++PWGKP K
Sbjct:   433 NHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTK 488


>UNIPROTKB|P92812 [details] [associations]
            symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
            species:39947 "Oryza sativa Japonica Group" [GO:0005739
            "mitochondrion" evidence=IC;ISS] InterPro:IPR002171
            InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467 GO:GO:0005739
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 EMBL:BA000029
            GenomeReviews:BA000029_GR EMBL:DQ167400 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
            Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
            eggNOG:COG0090 RefSeq:YP_002000581.1 GeneID:6450181
            KEGG:osa:6450181 EMBL:D78336 PIR:T03019 ProteinModelPortal:P92812
            STRING:P92812 PRIDE:P92812 Gramene:P92812 Uniprot:P92812
        Length = 502

 Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query:    96 SHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCK 155
             +H A+ LRKAGQS W G+RP++RGV MNPVDHP        K     GR S++PWGKP K
Sbjct:   433 NHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTK 488


>UNIPROTKB|Q2F969 [details] [associations]
            symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
            species:39946 "Oryza sativa Indica Group" [GO:0005739
            "mitochondrion" evidence=IC] InterPro:IPR002171 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            EMBL:DQ167399 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_514664.1
            ProteinModelPortal:Q2F969 PRIDE:Q2F969 GeneID:3950683
            Gramene:Q2F969 Uniprot:Q2F969
        Length = 502

 Score = 172 (65.6 bits), Expect = 3.5e-12, P = 3.5e-12
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query:    96 SHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCK 155
             +H A+ LRKAGQS W G+RP++RGV MNPVDHP        K     GR S++PWGKP K
Sbjct:   433 NHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGRTKG----GRPSVSPWGKPTK 488


>TIGR_CMR|CHY_2306 [details] [associations]
            symbol:CHY_2306 "ribosomal protein L2" species:246194
            "Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0016740
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            RefSeq:YP_361115.1 ProteinModelPortal:Q3A9R9 SMR:Q3A9R9
            STRING:Q3A9R9 GeneID:3726958 KEGG:chy:CHY_2306 PATRIC:21277683
            BioCyc:CHYD246194:GJCN-2305-MONOMER Uniprot:Q3A9R9
        Length = 274

 Score = 165 (63.1 bits), Expect = 3.6e-12, P = 3.6e-12
 Identities = 41/98 (41%), Positives = 52/98 (53%)

Query:    76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXX 135
             K+ + C   +  +G     L HE   + KAG++ WLG RP +RGV MNPVDHP       
Sbjct:   183 KVLLECRATIGQVG----NLEHENITIGKAGRARWLGIRPTVRGVVMNPVDHPHGGG--- 235

Query:   136 XKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKFSCLII 173
              +     GR  +TPWGKP    KT  RKK +  S LII
Sbjct:   236 -EGRSPIGRHPVTPWGKPTLGVKT--RKKNKASSKLII 270


>TIGR_CMR|APH_0283 [details] [associations]
            symbol:APH_0283 "ribosomal protein L2" species:212042
            "Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            RefSeq:YP_504895.1 ProteinModelPortal:Q2GL56 SMR:Q2GL56
            STRING:Q2GL56 GeneID:3930337 KEGG:aph:APH_0283 PATRIC:20949140
            OMA:STIHCIE ProtClustDB:PRK09374 BioCyc:APHA212042:GHPM-313-MONOMER
            PANTHER:PTHR13691:SF5 Uniprot:Q2GL56
        Length = 276

 Score = 165 (63.1 bits), Expect = 3.8e-12, P = 3.8e-12
 Identities = 44/89 (49%), Positives = 50/89 (56%)

Query:    78 EVACHLLVCM--LGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXX 135
             EV   L VC   +G  S   +   K L KAG+S WLG RP +RGV MNPVDHP       
Sbjct:   180 EVRRILSVCRATVGVVSNLDNRNIK-LGKAGRSRWLGLRPKVRGVAMNPVDHPHGGGEG- 237

Query:   136 XKSSGNHGRCSLTPWGKPCKWCKTASRKK 164
              K+SG  GR S+TPWG P K  KT  R K
Sbjct:   238 -KTSG--GRNSVTPWGVPTKGKKTRKRGK 263


>TIGR_CMR|ECH_0412 [details] [associations]
            symbol:ECH_0412 "ribosomal protein L2" species:205920
            "Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:CP000236
            GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 OMA:LVRQECM
            RefSeq:YP_507230.1 ProteinModelPortal:Q2GH53 SMR:Q2GH53
            STRING:Q2GH53 GeneID:3927141 KEGG:ech:ECH_0412 PATRIC:20576301
            BioCyc:ECHA205920:GJNR-413-MONOMER Uniprot:Q2GH53
        Length = 276

 Score = 161 (61.7 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 35/72 (48%), Positives = 43/72 (59%)

Query:    93 TTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGK 152
             + L ++   L KAG+S WLG RP +RGV MNP+DHP        K+SG  GR  +TPWG 
Sbjct:   196 SNLDNQNVKLGKAGRSRWLGIRPTVRGVAMNPIDHPHGGGEG--KTSG--GRNPVTPWGV 251

Query:   153 PCKWCKTASRKK 164
             P K  KT  R K
Sbjct:   252 PTKGKKTRKRNK 263


>TIGR_CMR|SO_0234 [details] [associations]
            symbol:SO_0234 "ribosomal protein L2" species:211586
            "Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            RefSeq:NP_715874.1 ProteinModelPortal:Q8EK65 SMR:Q8EK65
            GeneID:1168117 KEGG:son:SO_0234 PATRIC:23520161 Uniprot:Q8EK65
        Length = 274

 Score = 157 (60.3 bits), Expect = 3.1e-11, P = 3.1e-11
 Identities = 34/72 (47%), Positives = 41/72 (56%)

Query:    97 HEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKW 156
             H  + L KAG   W G RP +RGV MNPVDHP        ++SG  GR  +TPWG P K 
Sbjct:   200 HMLRQLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEG--RTSG--GRHPVTPWGVPTKG 255

Query:   157 CKTASRKKKRKF 168
              KT S K+  K+
Sbjct:   256 YKTRSNKRTDKY 267


>TIGR_CMR|CBU_0241 [details] [associations]
            symbol:CBU_0241 "ribosomal protein L2" species:227377
            "Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
            GO:GO:0006412 GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            RefSeq:NP_819285.1 ProteinModelPortal:Q83ES1 SMR:Q83ES1
            PRIDE:Q83ES1 GeneID:1208122 KEGG:cbu:CBU_0241 PATRIC:17929175
            BioCyc:CBUR227377:GJ7S-247-MONOMER Uniprot:Q83ES1
        Length = 275

 Score = 155 (59.6 bits), Expect = 5.3e-11, P = 5.3e-11
 Identities = 40/92 (43%), Positives = 51/92 (55%)

Query:    83 LLVCM--LGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSG 140
             L VC   +G  S +  H  + L KAG   W G+RP +RGV MNPVDHP        K+SG
Sbjct:   185 LAVCRACIGEVSNS-EHNLRSLGKAGAKRWRGRRPTVRGVAMNPVDHPHGGGEG--KTSG 241

Query:   141 NHGRCSLTPWGKPCKWCKTASRKKKRKFSCLI 172
               GR  ++P GKP K  KT  R+ KR  + +I
Sbjct:   242 --GRHPVSPTGKPTKGYKT--RRNKRTSNMII 269


>UNIPROTKB|Q9KNY7 [details] [associations]
            symbol:rplB "50S ribosomal protein L2" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
            "structural constituent of ribosome" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
            GO:GO:0006412 GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
            ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
            RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
            PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
            PATRIC:20084212 Uniprot:Q9KNY7
        Length = 274

 Score = 154 (59.3 bits), Expect = 6.9e-11, P = 6.9e-11
 Identities = 33/72 (45%), Positives = 42/72 (58%)

Query:    97 HEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKW 156
             H  + L KAG + W G RP +RGV MNPVDHP        ++SG  GR  ++PWG P K 
Sbjct:   200 HMLRELGKAGAARWRGVRPTVRGVVMNPVDHPHGGGEG--RTSG--GRHPVSPWGVPTKG 255

Query:   157 CKTASRKKKRKF 168
              KT S K+  K+
Sbjct:   256 YKTRSNKRTDKY 267


>TIGR_CMR|VC_2593 [details] [associations]
            symbol:VC_2593 "ribosomal protein L2" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
            ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
            RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
            PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
            PATRIC:20084212 Uniprot:Q9KNY7
        Length = 274

 Score = 154 (59.3 bits), Expect = 6.9e-11, P = 6.9e-11
 Identities = 33/72 (45%), Positives = 42/72 (58%)

Query:    97 HEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKW 156
             H  + L KAG + W G RP +RGV MNPVDHP        ++SG  GR  ++PWG P K 
Sbjct:   200 HMLRELGKAGAARWRGVRPTVRGVVMNPVDHPHGGGEG--RTSG--GRHPVSPWGVPTKG 255

Query:   157 CKTASRKKKRKF 168
              KT S K+  K+
Sbjct:   256 YKTRSNKRTDKY 267


>TIGR_CMR|NSE_0269 [details] [associations]
            symbol:NSE_0269 "ribosomal protein L2" species:222891
            "Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
            InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
            HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
            PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_506160.1 STRING:Q2GED6
            PRIDE:Q2GED6 GeneID:3931693 KEGG:nse:NSE_0269 PATRIC:22680629
            BioCyc:NSEN222891:GHFU-296-MONOMER Uniprot:Q2GED6
        Length = 279

 Score = 153 (58.9 bits), Expect = 9.6e-11, P = 9.6e-11
 Identities = 40/89 (44%), Positives = 47/89 (52%)

Query:    81 CHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSG 140
             CH  +   G  S       K L KAG+S WLG+RP +RGV MNPVDHP        K+SG
Sbjct:   193 CHATI---GAVSNADRKNTK-LGKAGRSRWLGRRPSVRGVAMNPVDHPMGGGEG--KTSG 246

Query:   141 NHGRCSLTPWGKPCKWCKTASRKK-KRKF 168
               GR  ++PWG P K  KT    K   KF
Sbjct:   247 --GRHPVSPWGFPTKGKKTRDPNKLSSKF 273


>UNIPROTKB|P60422 [details] [associations]
            symbol:rplB species:83333 "Escherichia coli K-12"
            [GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016740
            "transferase activity" evidence=IEA] [GO:0015934 "large ribosomal
            subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
            "rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
            PROSITE:PS00467 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0008270
            EMBL:U18997 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
            InterPro:IPR014722 PDB:2VHM PDBsum:2VHM PDB:2RDO PDBsum:2RDO
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
            PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
            PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
            PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
            PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
            PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
            PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
            PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
            PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
            PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
            PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU
            PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2
            PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T
            PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA
            PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK
            PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN
            PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4
            PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P
            PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT
            PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
            PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
            PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
            PDBsum:487D PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
            EMBL:X02613 OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            PIR:E23129 RefSeq:NP_417776.1 RefSeq:YP_492115.1
            ProteinModelPortal:P60422 SMR:P60422 DIP:DIP-35747N IntAct:P60422
            MINT:MINT-1322809 PaxDb:P60422 PRIDE:P60422
            EnsemblBacteria:EBESCT00000003048 EnsemblBacteria:EBESCT00000015239
            GeneID:12932295 GeneID:947820 KEGG:ecj:Y75_p3859 KEGG:eco:b3317
            PATRIC:32122066 EchoBASE:EB0858 EcoGene:EG10865
            BioCyc:EcoCyc:EG10865-MONOMER BioCyc:ECOL316407:JW3279-MONOMER
            EvolutionaryTrace:P60422 Genevestigator:P60422 Uniprot:P60422
        Length = 273

 Score = 152 (58.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 36/93 (38%), Positives = 46/93 (49%)

Query:    76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXX 135
             K+E  C   +  +G +     H  +VL KAG + W G RP +RG  MNPVDHP       
Sbjct:   183 KVEADCRATLGEVGNAE----HMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGG--- 235

Query:   136 XKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
                  N G+  +TPWG   K  KT S K+  KF
Sbjct:   236 --EGRNFGKHPVTPWGVQTKGKKTRSNKRTDKF 266


>TIGR_CMR|BA_0113 [details] [associations]
            symbol:BA_0113 "ribosomal protein L2" species:198094
            "Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            RefSeq:NP_842681.1 RefSeq:YP_016718.1 RefSeq:YP_026399.1
            ProteinModelPortal:Q81VS7 SMR:Q81VS7 DNASU:1087436
            EnsemblBacteria:EBBACT00000013045 EnsemblBacteria:EBBACT00000017422
            EnsemblBacteria:EBBACT00000020733 GeneID:1087436 GeneID:2819234
            GeneID:2850447 KEGG:ban:BA_0113 KEGG:bar:GBAA_0113 KEGG:bat:BAS0113
            BioCyc:BANT260799:GJAJ-124-MONOMER
            BioCyc:BANT261594:GJ7F-126-MONOMER Uniprot:Q81VS7
        Length = 276

 Score = 150 (57.9 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 43/111 (38%), Positives = 56/111 (50%)

Query:    64 VKLNQLVMTLILKLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMN 123
             V+L    + L+L    AC   V  +G  S    HE   + KAG+S WLG+RP +RG  MN
Sbjct:   174 VRLTSGEVRLVLS---ACRATVGQVGNES----HELIKIGKAGRSRWLGKRPTVRGSVMN 226

Query:   124 PVDHPXXXXXXXXKSSGNHGRCS-LTPWGKPCKWCKTASRKKKRKFSCLII 173
             PVDHP        +     GR S ++PWGKP    KT  RKK +     I+
Sbjct:   227 PVDHPHGGG----EGRSPIGRKSPMSPWGKPTLGFKT--RKKNKASDKFIV 271


>GENEDB_PFALCIPARUM|PF11_0337 [details] [associations]
            symbol:PF11_0337 "50S ribosomal protein L2,
            putative" species:5833 "Plasmodium falciparum" [GO:0000315
            "organellar large ribosomal subunit" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
            GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
            InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
            Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
            HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
            SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
            KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
            ProtClustDB:PTZ00031 Uniprot:Q8II37
        Length = 333

 Score = 134 (52.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 39/106 (36%), Positives = 50/106 (47%)

Query:    59 NAISPVKLNQLVMTLILKLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIR 118
             N  + +KL     T I K  + C   +   G  S  L    ++L KAG + WLG+RPV+R
Sbjct:   217 NEYATIKLKS---TEIRKFPLQCWATI---GQVSN-LERHMRILGKAGVNRWLGKRPVVR 269

Query:   119 GVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKWCKTASRKK 164
             GV MNP  HP        K      +CSL  WG      KT S+KK
Sbjct:   270 GVAMNPSKHPHGGGTS--KKHTKRPKCSL--WGICRDGYKTRSKKK 311

 Score = 36 (17.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query:    26 RDRQKWLGAEYAQLHRHSSLGFSALPFSTI 55
             R   K + ++YA ++  +SL    +P  +I
Sbjct:   159 RPGDKIIASKYANINPGNSLPLQNIPVGSI 188


>UNIPROTKB|Q8II37 [details] [associations]
            symbol:PF11_0337 "Mitochondrial ribosomal protein L2"
            species:36329 "Plasmodium falciparum 3D7" [GO:0005739
            "mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
            GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
            InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
            Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
            HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
            SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
            KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
            ProtClustDB:PTZ00031 Uniprot:Q8II37
        Length = 333

 Score = 134 (52.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 39/106 (36%), Positives = 50/106 (47%)

Query:    59 NAISPVKLNQLVMTLILKLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIR 118
             N  + +KL     T I K  + C   +   G  S  L    ++L KAG + WLG+RPV+R
Sbjct:   217 NEYATIKLKS---TEIRKFPLQCWATI---GQVSN-LERHMRILGKAGVNRWLGKRPVVR 269

Query:   119 GVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKWCKTASRKK 164
             GV MNP  HP        K      +CSL  WG      KT S+KK
Sbjct:   270 GVAMNPSKHPHGGGTS--KKHTKRPKCSL--WGICRDGYKTRSKKK 311

 Score = 36 (17.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query:    26 RDRQKWLGAEYAQLHRHSSLGFSALPFSTI 55
             R   K + ++YA ++  +SL    +P  +I
Sbjct:   159 RPGDKIIASKYANINPGNSLPLQNIPVGSI 188


>UNIPROTKB|Q9AMK8 [details] [associations]
            symbol:rplB "50S ribosomal protein L2" species:42684
            "Streptomyces collinus" [GO:0003735 "structural constituent of
            ribosome" evidence=IDA] [GO:0006412 "translation" evidence=IDA]
            [GO:0015934 "large ribosomal subunit" evidence=IDA]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 PANTHER:PTHR13691:SF5 EMBL:AF324467
            ProteinModelPortal:Q9AMK8 SMR:Q9AMK8 Uniprot:Q9AMK8
        Length = 278

 Score = 142 (55.0 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 31/61 (50%), Positives = 38/61 (62%)

Query:   104 KAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKWCKTASRK 163
             KAG+  WLG RP +RGV MNPVDHP        ++SG  GR  ++PWGKP    +T S K
Sbjct:   208 KAGRKRWLGVRPTVRGVVMNPVDHPHGGGEG--RTSG--GRHPVSPWGKPTG--RTRSNK 261

Query:   164 K 164
             K
Sbjct:   262 K 262


>SGD|S000000776 [details] [associations]
            symbol:RML2 "Mitochondrial ribosomal protein of the large
            subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0005762 "mitochondrial large ribosomal subunit" evidence=TAS]
            [GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0003735
            "structural constituent of ribosome" evidence=IEA;TAS] [GO:0006631
            "fatty acid metabolic process" evidence=IMP] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PROSITE:PS00467 SGD:S000000776 GO:GO:0016740 GO:GO:0006631
            GO:GO:0003723 EMBL:BK006939 GO:GO:0005762 GO:GO:0003735 EMBL:U18779
            GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 RefSeq:NP_010867.3 GeneID:856664 KEGG:sce:YEL047C
            RefSeq:NP_010864.3 GeneID:856660 KEGG:sce:YEL050C
            Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090
            PANTHER:PTHR13691:SF5 GeneTree:ENSGT00390000000189
            OrthoDB:EOG4W9NCQ PIR:S30827 ProteinModelPortal:P32611 SMR:P32611
            DIP:DIP-6812N IntAct:P32611 MINT:MINT-615808 STRING:P32611
            PaxDb:P32611 PeptideAtlas:P32611 EnsemblFungi:YEL050C CYGD:YEL050c
            OMA:QRGNCLP NextBio:982655 Genevestigator:P32611 GermOnline:YEL050C
            Uniprot:P32611
        Length = 393

 Score = 144 (55.7 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 32/83 (38%), Positives = 45/83 (54%)

Query:    85 VCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGR 144
             V  +G  S  + H+ + L KAG+S WLG RP +RGV MN  DHP        KS+    +
Sbjct:   302 VATIGVVSN-IDHQNRSLGKAGRSRWLGIRPTVRGVAMNKCDHPHGGGRGKSKSN----K 356

Query:   145 CSLTPWGKPCKWCKTASRKKKRK 167
              S++PWG+  K  KT   K + +
Sbjct:   357 LSMSPWGQLAKGYKTRRGKNQNR 379


>UNIPROTKB|P95052 [details] [associations]
            symbol:rplB "50S ribosomal protein L2" species:1773
            "Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
            PROSITE:PS00467 GO:GO:0005886 GO:GO:0040007 EMBL:AE000516
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
            GO:GO:0016740 EMBL:BX842574 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
            InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
            HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
            ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C70642
            RefSeq:NP_215218.1 RefSeq:NP_335148.1 RefSeq:YP_006514048.1
            ProteinModelPortal:P95052 SMR:P95052 PRIDE:P95052
            EnsemblBacteria:EBMYCT00000002534 EnsemblBacteria:EBMYCT00000069561
            GeneID:13318593 GeneID:888341 GeneID:926021 KEGG:mtc:MT0731
            KEGG:mtu:Rv0704 KEGG:mtv:RVBD_0704 PATRIC:18123339
            TubercuList:Rv0704 Uniprot:P95052
        Length = 280

 Score = 138 (53.6 bits), Expect = 4.8e-09, P = 4.8e-09
 Identities = 37/96 (38%), Positives = 52/96 (54%)

Query:    74 ILKLEVACHLLVCMLGPSSTTLSHEAKV-LRKAGQSHWLGQRPVIRGVPMNPVDHPXXXX 132
             I +++V C   V  +G +      +A +   KAG+  W G+RP +RGV MNPVDHP    
Sbjct:   182 IRRVDVRCRATVGEVGNAE-----QANINWGKAGRMRWKGKRPSVRGVVMNPVDHPHGGG 236

Query:   133 XXXXKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
                 K+SG  GR  ++PWGKP    + A+ K   KF
Sbjct:   237 EG--KTSG--GRHPVSPWGKPEGRTRNAN-KSSNKF 267


>UNIPROTKB|Q9L0D7 [details] [associations]
            symbol:rplB "50S ribosomal protein L2" species:100226
            "Streptomyces coelicolor A3(2)" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
            GO:GO:0003735 EMBL:AL939121 GenomeReviews:AL645882_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
            OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
            RefSeq:NP_628864.1 ProteinModelPortal:Q9L0D7 SMR:Q9L0D7
            PhosSite:P11111097 GeneID:1100146 KEGG:sco:SCO4705 PATRIC:23739232
            Uniprot:Q9L0D7
        Length = 278

 Score = 135 (52.6 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 31/61 (50%), Positives = 38/61 (62%)

Query:   104 KAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKWCKTASRK 163
             KAG+  WLG RP +RGV MNPVDHP        ++SG  GR  ++PWGK  K  +T S K
Sbjct:   208 KAGRKRWLGVRPTVRGVVMNPVDHPHGGGEG--RTSG--GRHPVSPWGK--KEGRTRSPK 261

Query:   164 K 164
             K
Sbjct:   262 K 262


>UNIPROTKB|P0C495 [details] [associations]
            symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
            species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
            GO:GO:0016020 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
            EMBL:AY522331 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 ProteinModelPortal:P0C495 SMR:P0C495
            PRIDE:P0C495 Gramene:P0C495 HOGENOM:HOG000232982
            Genevestigator:P0C495 Uniprot:P0C495
        Length = 273

 Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 31/66 (46%), Positives = 36/66 (54%)

Query:   100 KVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCS-LTPWGKPCKWCK 158
             K L +AG   WLG+RPV+RGV MNPVDHP        +     GR    TPWG P    +
Sbjct:   201 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGG----EGKAPIGRKKPTTPWGYPALGRR 256

Query:   159 TASRKK 164
             T  RKK
Sbjct:   257 TRKRKK 262


>UNIPROTKB|P0C496 [details] [associations]
            symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
            species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
            evidence=IC] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
            GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
            GO:GO:0016740 GO:GO:0003723 EMBL:AY522329 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
            InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
            RefSeq:YP_654244.1 RefSeq:YP_654261.1 ProteinModelPortal:P0C496
            SMR:P0C496 PRIDE:P0C496 GeneID:4126865 GeneID:4126903
            Gramene:P0C496 ProtClustDB:CLSC858538 Uniprot:P0C496
        Length = 273

 Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 31/66 (46%), Positives = 36/66 (54%)

Query:   100 KVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCS-LTPWGKPCKWCK 158
             K L +AG   WLG+RPV+RGV MNPVDHP        +     GR    TPWG P    +
Sbjct:   201 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGG----EGKAPIGRKKPTTPWGYPALGRR 256

Query:   159 TASRKK 164
             T  RKK
Sbjct:   257 TRKRKK 262


>UNIPROTKB|P0C497 [details] [associations]
            symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
            species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
            evidence=IC] InterPro:IPR002171 InterPro:IPR005880
            InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
            Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
            GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
            GO:GO:0016740 GO:GO:0003723 EMBL:X15901 EMBL:AY522330
            GenomeReviews:AY522330_GR GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 EMBL:M22826
            EMBL:L40578 ProtClustDB:CHL00052 Gene3D:4.10.950.10
            HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
            TIGRFAMs:TIGR01171 PIR:JQ0270 RefSeq:NP_039427.2 RefSeq:NP_039463.2
            ProteinModelPortal:P0C497 SMR:P0C497 STRING:P0C497 GeneID:3131421
            GeneID:3131424 KEGG:osa:3131421 KEGG:osa:3131424 Gramene:P0C497
            eggNOG:COG0090 KO:K02886 Uniprot:P0C497
        Length = 273

 Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 31/66 (46%), Positives = 36/66 (54%)

Query:   100 KVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCS-LTPWGKPCKWCK 158
             K L +AG   WLG+RPV+RGV MNPVDHP        +     GR    TPWG P    +
Sbjct:   201 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGG----EGKAPIGRKKPTTPWGYPALGRR 256

Query:   159 TASRKK 164
             T  RKK
Sbjct:   257 TRKRKK 262


>UNIPROTKB|Q6EN83 [details] [associations]
            symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
            species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
            InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
            InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
            PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
            GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP006728
            GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
            InterPro:IPR008991 SUPFAM:SSF50104 RefSeq:YP_052793.1
            RefSeq:YP_052839.1 ProteinModelPortal:Q6EN83 SMR:Q6EN83
            GeneID:2885923 GeneID:2885924 Gramene:Q6EN83 ProtClustDB:CHL00052
            Gene3D:4.10.950.10 HAMAP:MF_01320_B InterPro:IPR014726
            PANTHER:PTHR13691 TIGRFAMs:TIGR01171 Uniprot:Q6EN83
        Length = 273

 Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 31/66 (46%), Positives = 36/66 (54%)

Query:   100 KVLRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCS-LTPWGKPCKWCK 158
             K L +AG   WLG+RPV+RGV MNPVDHP        +     GR    TPWG P    +
Sbjct:   201 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGG----EGKAPIGRKKPTTPWGYPALGRR 256

Query:   159 TASRKK 164
             T  RKK
Sbjct:   257 TRKRKK 262


>TIGR_CMR|CJE_1872 [details] [associations]
            symbol:CJE_1872 "ribosomal protein L2" species:195099
            "Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0042254
            "ribosome biogenesis" evidence=ISS] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
            PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:CP000025
            GenomeReviews:CP000025_GR GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
            InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
            HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
            PANTHER:PTHR13691:SF5 RefSeq:YP_179842.1 ProteinModelPortal:Q5HS93
            SMR:Q5HS93 STRING:Q5HS93 GeneID:3232499 KEGG:cjr:CJE1872
            PATRIC:20045576 OMA:LVRQECM BioCyc:CJEJ195099:GJC0-1911-MONOMER
            Uniprot:Q5HS93
        Length = 276

 Score = 134 (52.2 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 39/99 (39%), Positives = 48/99 (48%)

Query:    73 LILKL---EVACHLLVCMLGPSSTTLSHEAKV-LRKAGQSHWLGQRPVIRGVPMNPVDHP 128
             +IL+L   E+   L  CM           A V + KAG++   G RP  RG  MNPVDHP
Sbjct:   173 VILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIRPQTRGSAMNPVDHP 232

Query:   129 XXXXXXXXKSSGNHGRCSLTPWGKPCKWCKTASRKKKRK 167
                     K+SG H    +TPWGKP K  KT  +K   K
Sbjct:   233 HGGGEGK-KNSGRH---PVTPWGKPTKGAKTRRKKASDK 267


>TIGR_CMR|SPO_0484 [details] [associations]
            symbol:SPO_0484 "ribosomal protein L2" species:246200
            "Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
            PROSITE:PS00467 EMBL:CP000031 GenomeReviews:CP000031_GR
            GO:GO:0006412 GO:GO:0016740 GO:GO:0003735 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
            InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
            HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
            PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_165746.1
            ProteinModelPortal:Q5LW59 SMR:Q5LW59 GeneID:3195307
            KEGG:sil:SPO0484 PATRIC:23374229 Uniprot:Q5LW59
        Length = 280

 Score = 128 (50.1 bits), Expect = 6.4e-08, P = 6.4e-08
 Identities = 32/72 (44%), Positives = 40/72 (55%)

Query:   104 KAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKWCKTASRK 163
             KAG+    G RP +RGV MNP+DHP        ++SG  GR  +TPWGK  K  +T  R 
Sbjct:   207 KAGRMRHKGIRPSVRGVAMNPIDHPHGGGEG--RTSG--GRTPVTPWGKDTKGTRT--RN 260

Query:   164 KKRKFSCLIILS 175
             K +    LII S
Sbjct:   261 KNKASQKLIIRS 272


>POMBASE|SPCC16C4.15 [details] [associations]
            symbol:rml2 "mitochondrial ribosomal protein subunit L2
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=ISM] [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0005762 "mitochondrial large ribosomal
            subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0016740 "transferase activity" evidence=IEA] [GO:0032543
            "mitochondrial translation" evidence=NAS] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467
            PomBase:SPCC16C4.15 EMBL:CU329672 GenomeReviews:CU329672_GR
            GO:GO:0016740 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
            GO:GO:0032543 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
            SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
            PANTHER:PTHR13691 TIGRFAMs:TIGR01171 HOGENOM:HOG000232982
            eggNOG:COG0090 PANTHER:PTHR13691:SF5 PIR:T41105 RefSeq:NP_587925.2
            HSSP:P60422 STRING:Q9Y7P4 EnsemblFungi:SPCC16C4.15.1 GeneID:2539321
            OrthoDB:EOG4W9NCQ NextBio:20800486 Uniprot:Q9Y7P4
        Length = 362

 Score = 121 (47.7 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 31/67 (46%), Positives = 35/67 (52%)

Query:   102 LRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCKW-CKTA 160
             L KAG+S WLG RP +RG  MNP DHP        KS GN  + S +PWG   K   KT 
Sbjct:   287 LGKAGRSRWLGIRPTVRGTAMNPCDHPHGGGGG--KSIGN--KPSQSPWGVLAKGGYKTR 342

Query:   161 SRKKKRK 167
               K   K
Sbjct:   343 RGKNVNK 349


>ASPGD|ASPL0000011317 [details] [associations]
            symbol:AN3649 species:162425 "Emericella nidulans"
            [GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006631
            "fatty acid metabolic process" evidence=IEA] InterPro:IPR002171
            InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
            Pfam:PF00181 Pfam:PF03947 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
            EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000061 Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
            InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
            Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
            HOGENOM:HOG000232982 eggNOG:COG0090 PANTHER:PTHR13691:SF5
            OrthoDB:EOG4W9NCQ OMA:QRGNCLP RefSeq:XP_661253.1 STRING:Q5B731
            EnsemblFungi:CADANIAT00005086 GeneID:2873068 KEGG:ani:AN3649.2
            Uniprot:Q5B731
        Length = 405

 Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
 Identities = 30/67 (44%), Positives = 34/67 (50%)

Query:   102 LRKAGQSHWLGQRPVIRGVPMNPVDHPXXXXXXXXKSSGNHGRCSLTPWGKPCK-WCKTA 160
             L KAG+S WL  RP +RG+ MN  DHP        KS GN    S  PWG P K   KT 
Sbjct:   325 LGKAGRSRWLNIRPTVRGLAMNAQDHPHGGGRG--KSKGNVDPKS--PWGLPAKSGYKTR 380

Query:   161 SRKKKRK 167
              + K  K
Sbjct:   381 PKWKINK 387


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.134   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      179       171   0.00090  108 3  11 22  0.50    31
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  30
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  170 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.00u 0.13s 16.13t   Elapsed:  00:00:01
  Total cpu time:  16.00u 0.13s 16.13t   Elapsed:  00:00:01
  Start:  Thu May  9 14:15:33 2013   End:  Thu May  9 14:15:34 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT2G44065 AT2G44065 AT2G44065	protein from Arabidopsis thaliana	2.8e-18
BLAST match view associations BLAST with GSU_2854 GSU_2854 GSU_2854 ribosomal protein L2	protein from Geobacter sulfurreducens PCA	2.3e-13
BLAST match view associations BLAST with CPS_0870 CPS_0870 CPS_0870 ribosomal protein L2	protein from Colwellia psychrerythraea 34H	9.2e-13
BLAST match view associations BLAST with RPL2 RPL2 RPL2 60S ribosomal protein L2, mitochondrial	protein from Oryza sativa	3.5e-12
BLAST match view associations BLAST with RPL2 RPL2 RPL2 60S ribosomal protein L2, mitochondrial	protein from Oryza sativa Japonica Group	3.5e-12
BLAST match view associations BLAST with RPL2 RPL2 RPL2 60S ribosomal protein L2, mitochondrial	protein from Oryza sativa Indica Group	3.5e-12
BLAST match view associations BLAST with CHY_2306 CHY_2306 CHY_2306 ribosomal protein L2	protein from Carboxydothermus hydrogenoformans Z-2901	3.6e-12
BLAST match view associations BLAST with APH_0283 APH_0283 APH_0283 ribosomal protein L2	protein from Anaplasma phagocytophilum HZ	3.8e-12
BLAST match view associations BLAST with ECH_0412 ECH_0412 ECH_0412 ribosomal protein L2	protein from Ehrlichia chaffeensis str. Arkansas	1.1e-11
BLAST match view associations BLAST with SO_0234 SO_0234 SO_0234 ribosomal protein L2	protein from Shewanella oneidensis MR-1	3.1e-11
BLAST match view associations BLAST with CBU_0241 CBU_0241 CBU_0241 ribosomal protein L2	protein from Coxiella burnetii RSA 493	5.3e-11
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Vibrio cholerae O1 biovar El Tor str. N16961	6.9e-11
BLAST match view associations BLAST with VC_2593 VC_2593 VC_2593 ribosomal protein L2	protein from Vibrio cholerae O1 biovar El Tor	6.9e-11
BLAST match view associations BLAST with NSE_0269 NSE_0269 NSE_0269 ribosomal protein L2	protein from Neorickettsia sennetsu str. Miyayama	9.6e-11
BLAST match view associations BLAST with rplB rplB rplB	gene from Escherichia coli K-12	1.1e-10
BLAST match view associations BLAST with BA_0113 BA_0113 BA_0113 ribosomal protein L2	protein from Bacillus anthracis str. Ames	2.0e-10
BLAST match view associations BLAST with PF11_0337 PF11_0337 PF11_0337 50S ribosomal protein L2, putative	gene from Plasmodium falciparum	2.9e-10
BLAST match view associations BLAST with PF11_0337 PF11_0337 PF11_0337 Mitochondrial ribosomal protein L2	protein from Plasmodium falciparum 3D7	2.9e-10
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Streptomyces collinus	1.7e-09
BLAST match view associations BLAST with RML2 RML2 RML2 Mitochondrial ribosomal protein of the large subunit	gene from Saccharomyces cerevisiae	2.4e-09
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Mycobacterium tuberculosis	4.8e-09
BLAST match view associations BLAST with rplB rplB rplB 50S ribosomal protein L2	protein from Streptomyces coelicolor A3(2)	1.0e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza sativa	1.3e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza sativa Indica Group	1.3e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza sativa Japonica Group	1.3e-08
BLAST match view associations BLAST with rpl2-A rpl2-A rpl2-A 50S ribosomal protein L2, chloroplastic	protein from Oryza nivara	1.3e-08
BLAST match view associations BLAST with CJE_1872 CJE_1872 CJE_1872 ribosomal protein L2	protein from Campylobacter jejuni RM1221	1.3e-08
BLAST match view associations BLAST with SPO_0484 SPO_0484 SPO_0484 ribosomal protein L2	protein from Ruegeria pomeroyi DSS-3	6.4e-08