BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045484
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3A9R9|RL2_CARHZ 50S ribosomal protein L2 OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=rplB PE=3 SV=1
Length = 274
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+ + C + +G L HE + KAG++ WLG RP +RGV MNPVDHP G GEGR
Sbjct: 183 KVLLECRATIGQVG----NLEHENITIGKAGRARWLGIRPTVRGVVMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKFSCLII 173
GR +TPWGKP KT RKK + S LII
Sbjct: 239 SPI----GRHPVTPWGKPTLGVKT--RKKNKASSKLII 270
>sp|B3EP58|RL2_CHLPB 50S ribosomal protein L2 OS=Chlorobium phaeobacteroides (strain
BS1) GN=rplB PE=3 SV=1
Length = 279
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 74 ILKLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGE 133
I K+ + C + +G HE VL KAG+S WLG RP RG+ MNPVDHP G GE
Sbjct: 181 IRKVRIECRATIGGIG----NDDHENIVLGKAGRSRWLGIRPQTRGMAMNPVDHPMGGGE 236
Query: 134 GRGKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKFSCLII 173
GR KS G + +PWG+ K KT R KK+ S LI+
Sbjct: 237 GRSKSGGGR-KHPKSPWGQLAKGLKT--RNKKKASSKLIV 273
>sp|B1I1J1|RL2_DESAP 50S ribosomal protein L2 OS=Desulforudis audaxviator (strain
MP104C) GN=rplB PE=3 SV=1
Length = 275
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 81 CHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGRGKSSG 140
C + +G + HE V+ KAG++ WLG RP +RGV MNPVDHP G GEGR
Sbjct: 188 CRATIGQVG----NVEHENIVIGKAGRARWLGIRPTVRGVVMNPVDHPHGGGEGRSPI-- 241
Query: 141 NHGRCSLTPWGKPCKWCKTASRKKKRKFSCLII 173
GR +TPWGKP +T R KK+ S LI+
Sbjct: 242 --GRPPVTPWGKPALGTRT--RNKKKASSKLIV 270
>sp|Q8K953|RL2_BUCAP 50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=rplB PE=3 SV=1
Length = 273
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K E C + +G S H KVL KAG S W+G RP +RG MNPVDHP G GEGR
Sbjct: 183 KTESNCRATIGEVGNSE----HMLKVLGKAGASRWIGIRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT K+ KF
Sbjct: 239 -----NFGKHPVTPWGLQTKGKKTRKNKRTEKF 266
>sp|Q2RFQ0|RL2_MOOTA 50S ribosomal protein L2 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplB PE=3 SV=1
Length = 276
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 74 ILKLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGE 133
+ K++ +C V +G L E + KAG+ WLG RP +RGV MNPVDHP G GE
Sbjct: 181 VRKVQESCRATVGQVG----NLDWENINIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGE 236
Query: 134 GRGKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKFSCLIIL 174
GR H +TPWGKP KT +KKRK S +I+
Sbjct: 237 GRAPVGRKH---PVTPWGKPAMGAKT---RKKRKLSDKLIV 271
>sp|Q89A71|RL2_BUCBP 50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=rplB PE=3 SV=1
Length = 273
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
KLE C + +G S + L +VL KAG S W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KLESKCRATIGEVGNSESML----RVLGKAGASRWRGIRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ ++PWG K KT K+ KF
Sbjct: 239 -----NFGKHPVSPWGLQTKGKKTRKNKRTEKF 266
>sp|B8D846|RL2_BUCAT 50S ribosomal protein L2 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain Tuc7) GN=rplB PE=3 SV=1
Length = 273
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K + C + +G S H KVL KAG S W+G RP +RG MNPVDHP G GEGR
Sbjct: 183 KTQSNCRATIGEVGNSE----HMLKVLGKAGASRWIGIRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT K+ KF
Sbjct: 239 -----NFGKHPVTPWGIQTKGKKTRKNKRTDKF 266
>sp|P57588|RL2_BUCAI 50S ribosomal protein L2 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=rplB PE=3 SV=1
Length = 273
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K + C + +G S H KVL KAG S W+G RP +RG MNPVDHP G GEGR
Sbjct: 183 KTQSNCRATIGEVGNSE----HMLKVLGKAGASRWIGIRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT K+ KF
Sbjct: 239 -----NFGKHPVTPWGIQTKGKKTRKNKRTDKF 266
>sp|B8D9U4|RL2_BUCA5 50S ribosomal protein L2 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain 5A) GN=rplB PE=3 SV=1
Length = 273
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K + C + +G S H KVL KAG S W+G RP +RG MNPVDHP G GEGR
Sbjct: 183 KTQSNCRATIGEVGNSE----HMLKVLGKAGASRWIGIRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT K+ KF
Sbjct: 239 -----NFGKHPVTPWGIQTKGKKTRKNKRTDKF 266
>sp|P60428|RL2_SALTY 50S ribosomal protein L2 OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|P60427|RL2_SALTI 50S ribosomal protein L2 OS=Salmonella typhi GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B4TXD9|RL2_SALSV 50S ribosomal protein L2 OS=Salmonella schwarzengrund (strain
CVM19633) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B5BGY3|RL2_SALPK 50S ribosomal protein L2 OS=Salmonella paratyphi A (strain
AKU_12601) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|A9MSZ5|RL2_SALPB 50S ribosomal protein L2 OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q5PIV5|RL2_SALPA 50S ribosomal protein L2 OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B4SUT7|RL2_SALNS 50S ribosomal protein L2 OS=Salmonella newport (strain SL254)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B4TKL2|RL2_SALHS 50S ribosomal protein L2 OS=Salmonella heidelberg (strain SL476)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B5RH18|RL2_SALG2 50S ribosomal protein L2 OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B5R288|RL2_SALEP 50S ribosomal protein L2 OS=Salmonella enteritidis PT4 (strain
P125109) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B5FJL1|RL2_SALDC 50S ribosomal protein L2 OS=Salmonella dublin (strain CT_02021853)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q57J35|RL2_SALCH 50S ribosomal protein L2 OS=Salmonella choleraesuis (strain SC-B67)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|A9MN51|RL2_SALAR 50S ribosomal protein L2 OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B5F8E9|RL2_SALA4 50S ribosomal protein L2 OS=Salmonella agona (strain SL483) GN=rplB
PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q32B34|RL2_SHIDS 50S ribosomal protein L2 OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q3YWU2|RL2_SHISS 50S ribosomal protein L2 OS=Shigella sonnei (strain Ss046) GN=rplB
PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|P60429|RL2_SHIFL 50S ribosomal protein L2 OS=Shigella flexneri GN=rplB PE=3 SV=2
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q0SZY6|RL2_SHIF8 50S ribosomal protein L2 OS=Shigella flexneri serotype 5b (strain
8401) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q31VV9|RL2_SHIBS 50S ribosomal protein L2 OS=Shigella boydii serotype 4 (strain
Sb227) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B2U2T5|RL2_SHIB3 50S ribosomal protein L2 OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7LRT3|RL2_ESCF3 50S ribosomal protein L2 OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q1R607|RL2_ECOUT 50S ribosomal protein L2 OS=Escherichia coli (strain UTI89 / UPEC)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B1LHD1|RL2_ECOSM 50S ribosomal protein L2 OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B6I231|RL2_ECOSE 50S ribosomal protein L2 OS=Escherichia coli (strain SE11) GN=rplB
PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7NDT8|RL2_ECOLU 50S ribosomal protein L2 OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|P60422|RL2_ECOLI 50S ribosomal protein L2 OS=Escherichia coli (strain K12) GN=rplB
PE=1 SV=2
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B1IPY2|RL2_ECOLC 50S ribosomal protein L2 OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|P60423|RL2_ECOL6 50S ribosomal protein L2 OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=rplB PE=3 SV=2
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|Q0TCE4|RL2_ECOL5 50S ribosomal protein L2 OS=Escherichia coli O6:K15:H31 (strain 536
/ UPEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|A1AGK5|RL2_ECOK1 50S ribosomal protein L2 OS=Escherichia coli O1:K1 / APEC GN=rplB
PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|A8A5C2|RL2_ECOHS 50S ribosomal protein L2 OS=Escherichia coli O9:H4 (strain HS)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B1X6G8|RL2_ECODH 50S ribosomal protein L2 OS=Escherichia coli (strain K12 / DH10B)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|C4ZUH2|RL2_ECOBW 50S ribosomal protein L2 OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7M1N1|RL2_ECO8A 50S ribosomal protein L2 OS=Escherichia coli O8 (strain IAI1)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7N1A1|RL2_ECO81 50S ribosomal protein L2 OS=Escherichia coli O81 (strain ED1a)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7NLN6|RL2_ECO7I 50S ribosomal protein L2 OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B5YTN8|RL2_ECO5E 50S ribosomal protein L2 OS=Escherichia coli O157:H7 (strain EC4115
/ EHEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|P60424|RL2_ECO57 50S ribosomal protein L2 OS=Escherichia coli O157:H7 GN=rplB PE=3
SV=2
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7L4K6|RL2_ECO55 50S ribosomal protein L2 OS=Escherichia coli (strain 55989 / EAEC)
GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7MCT2|RL2_ECO45 50S ribosomal protein L2 OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
>sp|B7UK41|RL2_ECO27 50S ribosomal protein L2 OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=rplB PE=3 SV=1
Length = 273
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 76 KLEVACHLLVCMLGPSSTTLSHEAKVLRKAGQSHWLGQRPVIRGVPMNPVDHPRGRGEGR 135
K+E C + +G H +VL KAG + W G RP +RG MNPVDHP G GEGR
Sbjct: 183 KVEADCRATLGEVG----NAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGR 238
Query: 136 GKSSGNHGRCSLTPWGKPCKWCKTASRKKKRKF 168
N G+ +TPWG K KT S K+ KF
Sbjct: 239 -----NFGKHPVTPWGVQTKGKKTRSNKRTDKF 266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,781,791
Number of Sequences: 539616
Number of extensions: 2674142
Number of successful extensions: 8027
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 6223
Number of HSP's gapped (non-prelim): 1031
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)