Query 045485
Match_columns 164
No_of_seqs 115 out of 1244
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 03:50:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045485.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045485hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2e_A Peroxiredoxin; redox pr 100.0 2.6E-38 9E-43 226.3 13.5 151 2-163 2-152 (157)
2 4gqc_A Thiol peroxidase, perox 100.0 1.9E-38 6.4E-43 228.8 10.2 151 3-164 4-155 (164)
3 3mng_A Peroxiredoxin-5, mitoch 100.0 1.6E-35 5.4E-40 215.4 16.2 157 2-164 13-173 (173)
4 1tp9_A Peroxiredoxin, PRX D (t 100.0 2E-35 6.7E-40 212.2 15.7 153 2-164 2-162 (162)
5 3sbc_A Peroxiredoxin TSA1; alp 100.0 1.6E-35 5.5E-40 221.4 12.2 148 2-163 21-175 (216)
6 3uma_A Hypothetical peroxiredo 100.0 3.7E-35 1.3E-39 215.4 13.3 153 2-164 24-184 (184)
7 3tue_A Tryparedoxin peroxidase 100.0 3.8E-34 1.3E-38 214.4 16.0 147 3-164 25-180 (219)
8 4f82_A Thioredoxin reductase; 100.0 4.9E-34 1.7E-38 207.4 15.6 158 2-164 8-174 (176)
9 2wfc_A Peroxiredoxin 5, PRDX5; 100.0 8.3E-34 2.8E-38 205.1 14.0 155 2-164 1-159 (167)
10 1q98_A Thiol peroxidase, TPX; 100.0 4.7E-33 1.6E-37 200.1 13.3 148 2-164 15-164 (165)
11 3p7x_A Probable thiol peroxida 100.0 5.6E-33 1.9E-37 199.7 12.2 144 2-164 18-163 (166)
12 2pwj_A Mitochondrial peroxired 100.0 2.1E-32 7E-37 198.4 15.1 149 6-164 9-171 (171)
13 2xhf_A Peroxiredoxin 5; oxidor 100.0 3.1E-32 1.1E-36 197.4 15.8 151 2-164 12-169 (171)
14 3zrd_A Thiol peroxidase; oxido 100.0 1E-32 3.5E-37 204.7 12.0 148 2-164 50-199 (200)
15 3ixr_A Bacterioferritin comigr 100.0 3.6E-33 1.2E-37 203.5 9.2 150 2-163 19-172 (179)
16 1psq_A Probable thiol peroxida 100.0 1.6E-32 5.4E-37 196.8 12.0 144 2-163 14-159 (163)
17 3tjj_A Peroxiredoxin-4; thiore 100.0 4.8E-32 1.6E-36 207.9 14.4 147 2-163 60-214 (254)
18 3drn_A Peroxiredoxin, bacterio 100.0 3.7E-32 1.3E-36 194.4 12.8 142 3-163 1-143 (161)
19 3gkn_A Bacterioferritin comigr 100.0 2.7E-32 9.2E-37 195.0 11.7 151 3-163 6-156 (163)
20 3keb_A Probable thiol peroxida 100.0 8.9E-32 3E-36 202.3 15.0 145 2-164 20-171 (224)
21 3qpm_A Peroxiredoxin; oxidored 100.0 6.8E-32 2.3E-36 205.5 12.8 147 2-163 46-200 (240)
22 2v2g_A Peroxiredoxin 6; oxidor 100.0 4.3E-32 1.5E-36 205.8 11.6 150 2-163 1-159 (233)
23 2c0d_A Thioredoxin peroxidase 100.0 1.7E-31 5.8E-36 201.0 14.6 143 4-163 25-178 (221)
24 1n8j_A AHPC, alkyl hydroperoxi 100.0 1.8E-31 6.2E-36 195.6 13.7 142 5-163 2-150 (186)
25 2pn8_A Peroxiredoxin-4; thiore 100.0 1.1E-31 3.7E-36 200.6 12.4 147 2-163 17-171 (211)
26 1xiy_A Peroxiredoxin, pfaop; a 100.0 1.9E-31 6.3E-36 195.3 13.0 154 4-164 1-177 (182)
27 2yzh_A Probable thiol peroxida 100.0 6.2E-32 2.1E-36 195.0 9.8 146 2-163 19-166 (171)
28 1prx_A HORF6; peroxiredoxin, h 100.0 2.2E-31 7.6E-36 200.7 13.1 150 2-163 3-163 (224)
29 1nm3_A Protein HI0572; hybrid, 100.0 3.6E-31 1.2E-35 200.9 14.3 151 2-163 1-161 (241)
30 1xcc_A 1-Cys peroxiredoxin; un 100.0 1.3E-31 4.4E-36 201.6 11.4 150 2-163 1-160 (220)
31 2a4v_A Peroxiredoxin DOT5; yea 100.0 5.5E-31 1.9E-35 187.8 10.1 130 2-148 5-136 (159)
32 3ztl_A Thioredoxin peroxidase; 100.0 1.2E-30 4.2E-35 196.2 12.5 147 2-163 38-192 (222)
33 1xvw_A Hypothetical protein RV 100.0 1.2E-30 4E-35 185.8 11.6 143 4-163 9-154 (160)
34 2i81_A 2-Cys peroxiredoxin; st 100.0 1.6E-30 5.4E-35 194.5 12.6 145 2-163 19-174 (213)
35 1uul_A Tryparedoxin peroxidase 100.0 3.1E-30 1.1E-34 191.0 12.9 146 2-162 4-158 (202)
36 1zye_A Thioredoxin-dependent p 100.0 5.5E-30 1.9E-34 192.4 14.4 146 2-162 25-178 (220)
37 1we0_A Alkyl hydroperoxide red 100.0 9.8E-30 3.4E-34 185.9 14.2 130 4-148 1-138 (187)
38 1qmv_A Human thioredoxin perox 100.0 6.2E-30 2.1E-34 188.6 12.6 145 2-163 3-157 (197)
39 2h01_A 2-Cys peroxiredoxin; th 100.0 1E-29 3.4E-34 186.7 13.3 129 5-148 1-140 (192)
40 2bmx_A Alkyl hydroperoxidase C 100.0 2.8E-29 9.5E-34 184.8 13.5 143 2-162 2-163 (195)
41 1xvq_A Thiol peroxidase; thior 100.0 3.1E-29 1E-33 181.8 13.4 146 2-164 16-163 (175)
42 1zof_A Alkyl hydroperoxide-red 100.0 5.1E-29 1.7E-33 183.7 13.5 130 4-148 1-142 (198)
43 3u5r_E Uncharacterized protein 100.0 3.4E-29 1.2E-33 187.7 12.4 140 2-163 30-184 (218)
44 4eo3_A Bacterioferritin comigr 100.0 1.2E-29 4E-34 200.6 10.4 131 9-163 3-133 (322)
45 2jsy_A Probable thiol peroxida 100.0 1.6E-29 5.4E-34 181.3 9.9 143 2-163 16-161 (167)
46 3a2v_A Probable peroxiredoxin; 100.0 5E-29 1.7E-33 190.5 12.1 145 3-163 4-156 (249)
47 3gl3_A Putative thiol:disulfid 100.0 5.1E-28 1.7E-32 170.2 12.6 137 2-162 1-138 (152)
48 1xzo_A BSSCO, hypothetical pro 100.0 6.7E-28 2.3E-32 173.3 12.7 136 2-148 5-155 (174)
49 2lrn_A Thiol:disulfide interch 100.0 8.2E-28 2.8E-32 169.7 11.9 123 2-146 1-127 (152)
50 3ewl_A Uncharacterized conserv 100.0 5.7E-28 1.9E-32 168.3 10.7 131 5-163 2-138 (142)
51 4fo5_A Thioredoxin-like protei 100.0 8.1E-29 2.8E-33 173.3 6.1 134 2-164 5-143 (143)
52 3fw2_A Thiol-disulfide oxidore 99.9 7.5E-28 2.6E-32 169.6 10.5 123 2-146 3-134 (150)
53 3kcm_A Thioredoxin family prot 99.9 1.6E-27 5.4E-32 168.0 12.1 138 4-164 2-141 (154)
54 3hcz_A Possible thiol-disulfid 99.9 2.1E-27 7.1E-32 165.9 12.3 125 2-147 3-130 (148)
55 2ywi_A Hypothetical conserved 99.9 2.2E-27 7.6E-32 173.9 12.3 124 2-147 16-149 (196)
56 3eyt_A Uncharacterized protein 99.9 1.4E-27 4.8E-32 169.1 9.7 135 5-162 1-148 (158)
57 3eur_A Uncharacterized protein 99.9 2.3E-27 7.7E-32 165.7 10.4 133 2-162 3-141 (142)
58 2cvb_A Probable thiol-disulfid 99.9 5.2E-27 1.8E-31 171.1 11.7 121 2-145 5-133 (188)
59 3lor_A Thiol-disulfide isomera 99.9 2.8E-27 9.5E-32 167.7 9.9 134 4-162 3-151 (160)
60 3lwa_A Secreted thiol-disulfid 99.9 6.1E-27 2.1E-31 170.1 11.8 138 3-162 30-177 (183)
61 2f9s_A Thiol-disulfide oxidore 99.9 7.3E-27 2.5E-31 164.4 11.7 134 5-163 1-135 (151)
62 2v1m_A Glutathione peroxidase; 99.9 4.3E-27 1.5E-31 168.2 10.5 141 2-162 3-163 (169)
63 3kh7_A Thiol:disulfide interch 99.9 1.4E-26 4.8E-31 167.9 12.0 121 2-148 28-152 (176)
64 1jfu_A Thiol:disulfide interch 99.9 3.9E-27 1.3E-31 171.4 8.8 142 3-162 33-176 (186)
65 2b5x_A YKUV protein, TRXY; thi 99.9 9.1E-27 3.1E-31 162.4 10.0 123 4-147 1-129 (148)
66 2p31_A CL683, glutathione pero 99.9 2.6E-27 8.8E-32 172.4 7.2 139 2-163 21-178 (181)
67 3fkf_A Thiol-disulfide oxidore 99.9 1.3E-26 4.5E-31 161.8 10.3 123 2-146 3-132 (148)
68 2l5o_A Putative thioredoxin; s 99.9 2.6E-26 8.7E-31 161.6 11.8 122 4-147 2-125 (153)
69 2gs3_A PHGPX, GPX-4, phospholi 99.9 1.3E-26 4.3E-31 169.3 10.3 148 3-163 22-183 (185)
70 2obi_A PHGPX, GPX-4, phospholi 99.9 1E-26 3.4E-31 169.3 9.6 136 2-147 19-168 (183)
71 2p5q_A Glutathione peroxidase 99.9 9.8E-27 3.4E-31 166.4 9.4 141 2-163 4-165 (170)
72 2lja_A Putative thiol-disulfid 99.9 4.4E-26 1.5E-30 160.3 11.5 138 2-163 1-140 (152)
73 2vup_A Glutathione peroxidase- 99.9 1.2E-26 3.9E-31 170.1 8.1 126 2-147 20-169 (190)
74 3or5_A Thiol:disulfide interch 99.9 6.6E-26 2.3E-30 161.2 11.6 141 2-162 6-147 (165)
75 3hdc_A Thioredoxin family prot 99.9 1.6E-26 5.6E-31 164.2 8.4 124 2-149 13-136 (158)
76 3dwv_A Glutathione peroxidase- 99.9 3.9E-27 1.3E-31 172.3 5.2 141 2-162 18-179 (187)
77 3erw_A Sporulation thiol-disul 99.9 4.3E-26 1.5E-30 158.5 9.5 123 2-147 7-133 (145)
78 3ia1_A THIO-disulfide isomeras 99.9 2.9E-26 9.8E-31 161.7 8.5 133 2-163 3-141 (154)
79 2lrt_A Uncharacterized protein 99.9 1.1E-25 3.8E-30 159.3 10.6 121 3-147 8-132 (152)
80 2ls5_A Uncharacterized protein 99.9 1.4E-27 4.8E-32 169.6 0.0 137 3-163 6-145 (159)
81 2f8a_A Glutathione peroxidase 99.9 8.6E-26 3E-30 168.3 9.6 145 5-162 21-203 (208)
82 2ggt_A SCO1 protein homolog, m 99.9 2E-25 6.8E-30 158.7 10.9 130 9-148 2-146 (164)
83 3raz_A Thioredoxin-related pro 99.9 5.2E-26 1.8E-30 160.3 7.6 129 9-163 4-137 (151)
84 2i3y_A Epididymal secretory gl 99.9 3.1E-25 1.1E-29 166.2 12.1 132 5-147 30-195 (215)
85 3me7_A Putative uncharacterize 99.9 3E-25 1E-29 160.2 11.0 134 4-148 1-146 (170)
86 3cmi_A Peroxiredoxin HYR1; thi 99.9 3.9E-26 1.3E-30 164.4 6.0 133 6-162 8-164 (171)
87 3ha9_A Uncharacterized thiored 99.9 7.9E-26 2.7E-30 161.4 7.4 131 4-164 11-162 (165)
88 2hyx_A Protein DIPZ; thioredox 99.9 3.1E-25 1E-29 177.1 10.4 126 3-148 50-184 (352)
89 2r37_A Glutathione peroxidase 99.9 8E-25 2.7E-29 163.0 11.9 132 5-147 12-177 (207)
90 4hde_A SCO1/SENC family lipopr 99.9 6.3E-24 2.2E-28 153.4 16.0 134 4-147 6-152 (170)
91 3kij_A Probable glutathione pe 99.9 2.5E-25 8.5E-30 161.6 8.3 126 4-148 12-155 (180)
92 1lu4_A Soluble secreted antige 99.9 1.3E-24 4.6E-29 149.5 11.2 131 8-163 2-133 (136)
93 4evm_A Thioredoxin family prot 99.9 8.7E-25 3E-29 149.9 10.2 130 9-164 1-137 (138)
94 2rli_A SCO2 protein homolog, m 99.9 1.7E-24 5.7E-29 155.1 12.0 128 11-148 7-149 (171)
95 2k6v_A Putative cytochrome C o 99.9 2.4E-25 8.3E-30 159.4 7.1 133 4-148 10-156 (172)
96 2b7k_A SCO1 protein; metalloch 99.9 1.6E-24 5.4E-29 160.2 11.1 133 4-147 13-163 (200)
97 1zzo_A RV1677; thioredoxin fol 99.9 3.1E-24 1.1E-28 147.3 11.5 129 6-162 1-131 (136)
98 2b1k_A Thiol:disulfide interch 99.9 3.8E-24 1.3E-28 153.1 12.0 120 3-147 21-144 (168)
99 1kng_A Thiol:disulfide interch 99.9 3.9E-24 1.3E-28 150.7 9.3 122 2-148 6-137 (156)
100 4h86_A Peroxiredoxin type-2; o 99.9 8.5E-23 2.9E-27 149.7 14.6 159 1-164 23-199 (199)
101 1i5g_A Tryparedoxin II; electr 99.9 1.1E-23 3.8E-28 147.0 6.7 121 6-147 3-128 (144)
102 2h30_A Thioredoxin, peptide me 99.9 8E-24 2.7E-28 150.4 4.6 125 17-163 23-153 (164)
103 1o8x_A Tryparedoxin, TRYX, TXN 99.9 5.4E-23 1.8E-27 144.0 6.0 121 5-147 3-128 (146)
104 1o73_A Tryparedoxin; electron 99.9 1.8E-22 6.1E-27 140.6 5.5 121 5-147 3-128 (144)
105 3s9f_A Tryparedoxin; thioredox 99.9 3.9E-23 1.4E-27 148.3 1.6 123 3-147 21-148 (165)
106 2lus_A Thioredoxion; CR-Trp16, 99.8 7.2E-23 2.5E-27 142.2 0.0 120 8-147 2-127 (143)
107 2fwh_A Thiol:disulfide interch 99.5 6.9E-16 2.4E-20 106.6 -0.2 117 4-163 4-125 (134)
108 2l57_A Uncharacterized protein 99.5 7.4E-15 2.5E-19 99.9 3.8 110 8-162 4-113 (126)
109 2ju5_A Thioredoxin disulfide i 99.5 3.1E-15 1.1E-19 105.8 -0.4 93 27-148 40-135 (154)
110 3hxs_A Thioredoxin, TRXP; elec 99.4 7E-13 2.4E-17 91.6 6.8 98 20-163 39-136 (141)
111 3ul3_B Thioredoxin, thioredoxi 99.4 4.4E-13 1.5E-17 91.5 5.6 107 6-162 20-126 (128)
112 3fk8_A Disulphide isomerase; A 99.4 2E-13 7E-18 93.5 3.5 99 28-163 23-130 (133)
113 2kuc_A Putative disulphide-iso 99.3 9.8E-13 3.3E-17 89.6 3.9 95 27-162 20-117 (130)
114 2voc_A Thioredoxin; electron t 99.3 8.4E-12 2.9E-16 83.0 8.4 86 34-162 16-101 (112)
115 2pu9_C TRX-F, thioredoxin F-ty 99.3 9.3E-12 3.2E-16 82.5 6.0 85 34-162 23-107 (111)
116 3f9u_A Putative exported cytoc 99.3 6.3E-13 2.2E-17 95.0 0.3 104 27-147 40-149 (172)
117 3qfa_C Thioredoxin; protein-pr 99.2 9.8E-12 3.3E-16 83.4 4.8 87 30-162 27-113 (116)
118 1nsw_A Thioredoxin, TRX; therm 99.2 2E-11 6.8E-16 79.8 6.1 87 34-163 16-102 (105)
119 2o8v_B Thioredoxin 1; disulfid 99.2 1E-11 3.5E-16 85.0 4.5 86 34-162 39-124 (128)
120 3p2a_A Thioredoxin 2, putative 99.2 2.2E-11 7.4E-16 84.9 6.2 109 6-162 31-139 (148)
121 2l5l_A Thioredoxin; structural 99.2 1.3E-11 4.3E-16 85.1 4.9 86 34-162 37-122 (136)
122 3f3q_A Thioredoxin-1; His TAG, 99.2 3.3E-11 1.1E-15 79.9 5.9 85 34-163 23-107 (109)
123 3d6i_A Monothiol glutaredoxin- 99.2 3.8E-11 1.3E-15 79.5 6.0 75 35-148 21-95 (112)
124 3die_A Thioredoxin, TRX; elect 99.2 4.6E-11 1.6E-15 78.0 6.4 87 34-163 18-104 (106)
125 1thx_A Thioredoxin, thioredoxi 99.2 5.5E-11 1.9E-15 78.7 6.8 86 34-162 24-109 (115)
126 1faa_A Thioredoxin F; electron 99.2 3.9E-11 1.3E-15 81.0 6.1 85 34-162 36-120 (124)
127 1w4v_A Thioredoxin, mitochondr 99.2 3.6E-11 1.2E-15 80.8 5.9 86 34-162 30-115 (119)
128 1dby_A Chloroplast thioredoxin 99.2 4.3E-11 1.5E-15 78.4 6.1 86 34-162 18-103 (107)
129 1t00_A Thioredoxin, TRX; redox 99.2 3.6E-11 1.2E-15 79.5 5.7 74 34-147 22-95 (112)
130 1xfl_A Thioredoxin H1; AT3G510 99.2 1.1E-11 3.6E-16 84.3 3.0 84 34-162 37-120 (124)
131 3d22_A TRXH4, thioredoxin H-ty 99.2 2E-11 6.8E-16 84.1 4.4 73 34-147 45-117 (139)
132 2i4a_A Thioredoxin; acidophIle 99.2 7.1E-11 2.4E-15 77.2 6.8 87 34-163 19-105 (107)
133 3cxg_A Putative thioredoxin; m 99.2 2.6E-11 9E-16 83.4 4.5 77 29-147 35-114 (133)
134 1ep7_A Thioredoxin CH1, H-type 99.1 5.3E-11 1.8E-15 78.6 5.4 84 35-162 24-107 (112)
135 3zzx_A Thioredoxin; oxidoreduc 99.1 7.2E-11 2.4E-15 78.3 5.9 77 29-147 15-91 (105)
136 2trx_A Thioredoxin; electron t 99.1 6.1E-11 2.1E-15 77.8 5.4 86 34-162 19-104 (108)
137 2j23_A Thioredoxin; immune pro 99.1 5.5E-11 1.9E-15 80.2 4.8 86 34-162 32-117 (121)
138 3gix_A Thioredoxin-like protei 99.1 2.1E-11 7.1E-16 85.7 2.7 74 34-147 22-95 (149)
139 1xwb_A Thioredoxin; dimerizati 99.1 1.5E-10 5.1E-15 75.5 6.5 90 29-163 15-104 (106)
140 3tco_A Thioredoxin (TRXA-1); d 99.1 1.1E-10 3.6E-15 76.5 5.6 86 34-162 20-105 (109)
141 2lst_A Thioredoxin; structural 98.7 7.6E-12 2.6E-16 85.2 0.0 83 27-147 12-100 (130)
142 2oe3_A Thioredoxin-3; electron 99.1 1.5E-10 5.2E-15 77.4 6.4 85 34-163 29-113 (114)
143 2e0q_A Thioredoxin; electron t 99.1 8.7E-11 3E-15 76.1 5.0 85 34-162 15-99 (104)
144 2vlu_A Thioredoxin, thioredoxi 99.1 1E-10 3.5E-15 78.5 5.5 84 34-162 33-116 (122)
145 2dj0_A Thioredoxin-related tra 99.1 1.8E-10 6.2E-15 79.2 6.8 81 34-147 25-105 (137)
146 4euy_A Uncharacterized protein 99.1 7.6E-11 2.6E-15 77.4 4.7 86 34-163 17-102 (105)
147 3m9j_A Thioredoxin; oxidoreduc 99.1 1.6E-10 5.6E-15 75.2 6.2 87 30-162 16-102 (105)
148 1fb6_A Thioredoxin M; electron 99.1 1.1E-10 3.8E-15 76.0 5.3 86 34-162 17-102 (105)
149 1x5d_A Protein disulfide-isome 99.1 2E-10 7E-15 78.0 6.8 75 34-147 24-101 (133)
150 2l6c_A Thioredoxin; oxidoreduc 99.1 1.6E-10 5.3E-15 76.7 5.9 89 30-162 14-102 (110)
151 1z6n_A Hypothetical protein PA 99.1 2.9E-11 1E-15 86.8 2.1 81 28-146 48-128 (167)
152 2dj1_A Protein disulfide-isome 99.1 1.1E-10 3.9E-15 80.2 5.0 73 34-146 33-107 (140)
153 2yzu_A Thioredoxin; redox prot 99.1 2.2E-10 7.5E-15 74.9 6.2 87 34-163 17-103 (109)
154 2ppt_A Thioredoxin-2; thiredox 99.1 2.2E-10 7.5E-15 80.9 6.6 86 34-162 63-148 (155)
155 2xc2_A Thioredoxinn; oxidoredu 99.1 1.1E-10 3.7E-15 78.0 4.7 87 29-162 28-114 (117)
156 1syr_A Thioredoxin; SGPP, stru 99.1 2.5E-10 8.4E-15 75.8 6.4 85 34-163 25-109 (112)
157 3qou_A Protein YBBN; thioredox 99.1 5.5E-10 1.9E-14 85.7 9.3 74 34-147 25-98 (287)
158 2wz9_A Glutaredoxin-3; protein 99.1 2.3E-10 7.8E-15 80.4 6.2 72 35-147 32-103 (153)
159 2dml_A Protein disulfide-isome 99.1 3.2E-10 1.1E-14 76.9 6.7 75 34-147 34-108 (130)
160 2f51_A Thioredoxin; electron t 99.1 2.1E-10 7.3E-15 77.1 5.5 85 34-162 22-109 (118)
161 2vim_A Thioredoxin, TRX; thior 99.0 3.2E-10 1.1E-14 73.6 6.1 84 34-162 18-101 (104)
162 1r26_A Thioredoxin; redox-acti 99.0 3.3E-10 1.1E-14 77.1 6.3 73 34-147 36-108 (125)
163 1x5e_A Thioredoxin domain cont 99.0 2.7E-10 9.3E-15 77.0 5.5 88 31-162 19-106 (126)
164 3gnj_A Thioredoxin domain prot 99.0 3.3E-10 1.1E-14 74.5 5.6 86 34-162 21-106 (111)
165 1gh2_A Thioredoxin-like protei 99.0 2.9E-10 9.9E-15 74.6 5.3 73 34-147 20-92 (107)
166 1oaz_A Thioredoxin 1; immune s 99.0 8.1E-10 2.8E-14 74.9 7.5 87 34-163 20-120 (123)
167 3hz4_A Thioredoxin; NYSGXRC, P 99.0 4E-10 1.4E-14 77.9 5.9 74 34-147 23-96 (140)
168 1ti3_A Thioredoxin H, PTTRXH1; 99.0 2.7E-10 9.1E-15 75.2 4.3 84 34-162 25-108 (113)
169 1sen_A Thioredoxin-like protei 99.0 7E-12 2.4E-16 89.4 -3.8 85 27-148 39-123 (164)
170 2vm1_A Thioredoxin, thioredoxi 99.0 4.5E-10 1.5E-14 74.7 5.3 72 35-147 28-99 (118)
171 3emx_A Thioredoxin; structural 99.0 2.9E-10 9.8E-15 78.2 4.4 94 21-148 15-111 (135)
172 2i1u_A Thioredoxin, TRX, MPT46 99.0 9.7E-10 3.3E-14 73.4 6.6 86 34-162 29-114 (121)
173 2dj3_A Protein disulfide-isome 99.0 1.7E-10 5.7E-15 78.6 2.1 89 35-162 25-114 (133)
174 1mek_A Protein disulfide isome 99.0 3.5E-10 1.2E-14 75.1 3.5 87 34-162 23-113 (120)
175 3dxb_A Thioredoxin N-terminall 99.0 6.8E-10 2.3E-14 82.6 5.5 74 34-147 29-102 (222)
176 2yj7_A LPBCA thioredoxin; oxid 98.5 1.2E-10 3.9E-15 75.7 0.0 87 34-163 18-104 (106)
177 3aps_A DNAJ homolog subfamily 98.9 5.9E-10 2E-14 74.7 3.4 69 34-141 20-88 (122)
178 3apq_A DNAJ homolog subfamily 98.9 3.2E-10 1.1E-14 83.6 1.5 74 34-147 113-186 (210)
179 1qgv_A Spliceosomal protein U5 98.9 9.8E-10 3.3E-14 76.4 3.9 74 34-147 22-95 (142)
180 1zma_A Bacterocin transport ac 98.9 1.7E-09 5.8E-14 72.3 4.7 78 34-147 28-105 (118)
181 3uvt_A Thioredoxin domain-cont 98.9 9.5E-10 3.2E-14 72.2 3.4 75 34-147 20-96 (111)
182 1v98_A Thioredoxin; oxidoreduc 98.9 2.7E-09 9.1E-14 73.5 5.5 73 35-147 50-122 (140)
183 1nho_A Probable thioredoxin; b 98.9 5.5E-09 1.9E-13 65.3 6.4 78 38-162 4-81 (85)
184 3h79_A Thioredoxin-like protei 98.9 1.6E-09 5.3E-14 73.4 4.0 70 35-142 33-106 (127)
185 2djj_A PDI, protein disulfide- 98.9 1.1E-09 3.8E-14 73.2 3.1 44 34-80 24-71 (121)
186 1wmj_A Thioredoxin H-type; str 98.9 4.7E-10 1.6E-14 75.9 1.2 84 34-162 35-118 (130)
187 3idv_A Protein disulfide-isome 98.8 6.3E-09 2.2E-13 77.4 5.7 70 34-142 31-102 (241)
188 1wou_A Thioredoxin -related pr 98.8 4.3E-09 1.5E-13 71.1 3.9 76 34-141 23-105 (123)
189 1fo5_A Thioredoxin; disulfide 98.8 5.6E-09 1.9E-13 65.3 4.0 40 37-80 4-43 (85)
190 3ira_A Conserved protein; meth 98.8 2.4E-08 8.4E-13 71.9 7.5 104 27-163 32-141 (173)
191 1a8l_A Protein disulfide oxido 98.7 2.3E-08 7.8E-13 73.9 6.7 74 35-147 133-210 (226)
192 2es7_A Q8ZP25_salty, putative 98.7 6.4E-09 2.2E-13 72.5 3.3 71 36-147 35-109 (142)
193 3ph9_A Anterior gradient prote 98.7 1.2E-09 4E-14 77.2 -0.6 91 34-163 43-139 (151)
194 3t58_A Sulfhydryl oxidase 1; o 98.7 1.1E-08 3.7E-13 85.3 5.0 77 34-146 29-110 (519)
195 1a0r_P Phosducin, MEKA, PP33; 98.7 5.6E-09 1.9E-13 79.2 2.8 87 35-163 133-223 (245)
196 2dbc_A PDCL2, unnamed protein 98.7 5.4E-09 1.9E-13 71.9 1.7 70 35-148 30-99 (135)
197 3ed3_A Protein disulfide-isome 98.6 2.1E-08 7.3E-13 77.9 4.5 68 35-139 35-102 (298)
198 3iv4_A Putative oxidoreductase 98.6 1.5E-08 5.2E-13 67.7 3.1 88 35-161 24-111 (112)
199 3q6o_A Sulfhydryl oxidase 1; p 98.6 3.6E-08 1.2E-12 74.0 5.5 68 35-138 30-99 (244)
200 3idv_A Protein disulfide-isome 98.5 3.3E-07 1.1E-11 68.0 8.8 71 34-143 146-218 (241)
201 2hls_A Protein disulfide oxido 98.5 2.2E-07 7.7E-12 70.0 7.5 68 34-142 137-207 (243)
202 3kp8_A Vkorc1/thioredoxin doma 98.5 3.3E-09 1.1E-13 70.3 -2.5 37 27-66 5-41 (106)
203 1ilo_A Conserved hypothetical 98.5 2.1E-07 7E-12 57.0 5.9 61 39-144 3-63 (77)
204 1sji_A Calsequestrin 2, calseq 98.5 3.8E-07 1.3E-11 72.0 8.8 68 34-141 27-101 (350)
205 2qgv_A Hydrogenase-1 operon pr 98.5 8.2E-08 2.8E-12 66.7 4.1 75 34-147 33-109 (140)
206 2av4_A Thioredoxin-like protei 98.5 1.4E-07 4.9E-12 66.6 4.7 72 34-145 40-111 (160)
207 3evi_A Phosducin-like protein 98.4 1.5E-07 5.1E-12 63.5 4.2 83 37-163 25-111 (118)
208 2trc_P Phosducin, MEKA, PP33; 98.4 7.7E-08 2.6E-12 71.6 2.6 71 35-147 120-190 (217)
209 3f8u_A Protein disulfide-isome 98.4 1E-07 3.5E-12 78.1 3.3 69 34-141 369-438 (481)
210 2qsi_A Putative hydrogenase ex 98.4 3.8E-07 1.3E-11 63.1 4.3 71 37-147 35-107 (137)
211 2r2j_A Thioredoxin domain-cont 98.3 7.3E-07 2.5E-11 71.3 5.6 72 34-144 21-97 (382)
212 2b5e_A Protein disulfide-isome 98.3 4.6E-07 1.6E-11 74.8 4.0 69 34-141 30-98 (504)
213 1eej_A Thiol:disulfide interch 98.2 1.4E-07 4.8E-12 69.9 0.3 36 34-75 85-120 (216)
214 3qcp_A QSOX from trypanosoma b 98.2 5.2E-07 1.8E-11 74.2 3.7 68 35-140 42-116 (470)
215 3apo_A DNAJ homolog subfamily 98.2 3.2E-07 1.1E-11 79.5 2.4 74 34-147 674-747 (780)
216 3f8u_A Protein disulfide-isome 98.2 9.1E-07 3.1E-11 72.5 4.9 71 36-146 22-92 (481)
217 3apo_A DNAJ homolog subfamily 98.2 8E-07 2.7E-11 77.0 4.7 76 29-146 450-525 (780)
218 2ywm_A Glutaredoxin-like prote 98.2 9.2E-07 3.1E-11 65.4 4.0 68 35-146 135-203 (229)
219 3gyk_A 27KDA outer membrane pr 98.2 7.7E-07 2.6E-11 63.2 3.4 44 27-75 15-58 (175)
220 3hd5_A Thiol:disulfide interch 98.1 6.7E-07 2.3E-11 64.7 1.5 39 34-75 24-62 (195)
221 3uem_A Protein disulfide-isome 98.1 8.5E-07 2.9E-11 70.0 2.1 34 34-69 266-299 (361)
222 2b5e_A Protein disulfide-isome 98.0 8E-07 2.7E-11 73.3 0.3 40 34-75 375-416 (504)
223 2znm_A Thiol:disulfide interch 98.0 4.8E-06 1.6E-10 60.0 4.1 38 35-75 22-59 (195)
224 2e7p_A Glutaredoxin; thioredox 97.9 3.1E-06 1.1E-10 55.9 2.1 28 32-62 16-43 (116)
225 3dml_A Putative uncharacterize 97.9 1.3E-06 4.4E-11 58.8 0.0 76 35-147 18-94 (116)
226 2dlx_A UBX domain-containing p 97.9 3.4E-05 1.2E-09 54.2 6.6 75 34-145 41-119 (153)
227 1t3b_A Thiol:disulfide interch 97.8 6.2E-06 2.1E-10 60.7 1.8 35 35-75 86-120 (211)
228 1v58_A Thiol:disulfide interch 97.8 1.5E-05 5E-10 60.0 3.5 37 34-75 96-132 (241)
229 3h93_A Thiol:disulfide interch 97.8 3.1E-06 1.1E-10 61.0 -0.2 37 35-74 25-61 (192)
230 1z6m_A Conserved hypothetical 97.7 5.2E-05 1.8E-09 53.6 4.8 46 27-75 20-66 (175)
231 2k8s_A Thioredoxin; dimer, str 97.6 4.5E-05 1.5E-09 47.1 3.2 24 39-64 4-27 (80)
232 3us3_A Calsequestrin-1; calciu 97.6 0.00012 4E-09 58.2 6.5 42 35-80 30-78 (367)
233 2ywm_A Glutaredoxin-like prote 97.6 6.3E-05 2.2E-09 55.4 4.2 40 35-75 20-64 (229)
234 1ttz_A Conserved hypothetical 97.3 5.4E-05 1.9E-09 48.0 1.2 22 39-62 3-24 (87)
235 2rem_A Disulfide oxidoreductas 97.3 6.3E-05 2.1E-09 53.9 1.2 38 35-75 25-62 (193)
236 3ga4_A Dolichyl-diphosphooligo 97.1 0.00041 1.4E-08 49.8 4.3 30 36-67 38-74 (178)
237 1hyu_A AHPF, alkyl hydroperoxi 97.1 0.00063 2.2E-08 56.4 6.0 40 37-80 118-157 (521)
238 1ego_A Glutaredoxin; electron 97.1 5.7E-05 1.9E-09 46.8 -0.2 33 39-75 3-35 (85)
239 1a8l_A Protein disulfide oxido 97.1 0.00044 1.5E-08 50.6 4.3 55 36-95 22-77 (226)
240 1h75_A Glutaredoxin-like prote 97.1 0.00045 1.5E-08 42.3 3.5 33 39-81 3-35 (81)
241 1wjk_A C330018D20RIK protein; 97.0 7.6E-05 2.6E-09 48.4 -0.6 38 35-80 15-52 (100)
242 1r7h_A NRDH-redoxin; thioredox 96.8 0.00083 2.8E-08 40.2 3.1 32 40-81 4-35 (75)
243 2fgx_A Putative thioredoxin; N 96.8 0.00058 2E-08 45.0 2.5 38 37-80 30-67 (107)
244 2klx_A Glutaredoxin; thioredox 96.3 0.0098 3.3E-07 36.9 5.7 45 39-94 8-53 (89)
245 3kp9_A Vkorc1/thioredoxin doma 96.2 0.001 3.5E-08 51.4 0.9 36 27-65 190-225 (291)
246 3uem_A Protein disulfide-isome 96.0 0.0066 2.2E-07 47.5 4.6 40 37-80 137-176 (361)
247 1kte_A Thioltransferase; redox 95.9 0.0014 4.9E-08 42.0 0.2 22 39-62 14-35 (105)
248 3gv1_A Disulfide interchange p 95.8 0.0058 2E-07 42.3 2.9 27 34-62 13-39 (147)
249 3q6o_A Sulfhydryl oxidase 1; p 95.6 0.035 1.2E-06 40.9 6.8 51 98-163 187-237 (244)
250 2lqo_A Putative glutaredoxin R 95.4 0.015 5.2E-07 36.9 3.6 38 45-91 11-49 (92)
251 3hz8_A Thiol:disulfide interch 95.4 0.0036 1.2E-07 45.0 0.6 37 35-74 24-60 (193)
252 1wik_A Thioredoxin-like protei 95.3 0.046 1.6E-06 35.4 5.9 58 34-102 13-75 (109)
253 2qc7_A ERP31, ERP28, endoplasm 95.2 0.011 3.9E-07 44.2 3.1 37 35-78 22-61 (240)
254 1un2_A DSBA, thiol-disulfide i 95.2 0.0021 7E-08 46.7 -1.2 42 34-79 112-156 (197)
255 2yan_A Glutaredoxin-3; oxidore 95.1 0.023 7.9E-07 36.5 4.0 51 34-94 15-70 (105)
256 1fov_A Glutaredoxin 3, GRX3; a 95.1 0.018 6E-07 34.8 3.2 45 40-94 4-49 (82)
257 2djk_A PDI, protein disulfide- 95.0 0.0098 3.4E-07 39.9 2.0 37 35-75 23-59 (133)
258 2c0g_A ERP29 homolog, windbeut 95.0 0.027 9.4E-07 42.3 4.6 41 35-81 33-76 (248)
259 2cq9_A GLRX2 protein, glutared 94.9 0.03 1E-06 37.6 4.2 23 36-61 27-49 (130)
260 2hze_A Glutaredoxin-1; thiored 94.8 0.019 6.5E-07 37.5 2.8 20 38-59 20-39 (114)
261 2khp_A Glutaredoxin; thioredox 94.7 0.036 1.2E-06 34.4 4.0 46 39-94 8-54 (92)
262 3feu_A Putative lipoprotein; a 94.6 0.0095 3.2E-07 42.5 1.1 30 35-66 22-51 (185)
263 3qmx_A Glutaredoxin A, glutare 94.5 0.023 7.7E-07 36.4 2.7 44 39-92 18-62 (99)
264 3c1r_A Glutaredoxin-1; oxidize 94.4 0.037 1.3E-06 36.5 3.5 14 39-53 27-40 (118)
265 2ht9_A Glutaredoxin-2; thiored 94.3 0.036 1.2E-06 38.1 3.5 23 36-61 49-71 (146)
266 2hls_A Protein disulfide oxido 94.2 0.024 8.3E-07 42.2 2.6 55 35-95 25-85 (243)
267 3ic4_A Glutaredoxin (GRX-1); s 94.2 0.029 9.9E-07 34.8 2.6 19 40-60 15-33 (92)
268 3rhb_A ATGRXC5, glutaredoxin-C 94.1 0.035 1.2E-06 36.0 2.9 20 39-60 21-40 (113)
269 3l9v_A Putative thiol-disulfid 93.7 0.0064 2.2E-07 43.5 -1.4 39 34-75 13-54 (189)
270 2ct6_A SH3 domain-binding glut 93.6 0.18 6E-06 32.8 5.6 44 45-91 15-59 (111)
271 3h8q_A Thioredoxin reductase 3 92.9 0.099 3.4E-06 34.1 3.6 48 36-94 17-68 (114)
272 2ec4_A FAS-associated factor 1 91.6 0.38 1.3E-05 34.1 5.6 90 34-147 54-152 (178)
273 3ctg_A Glutaredoxin-2; reduced 91.6 0.19 6.4E-06 33.6 3.8 14 39-53 39-52 (129)
274 3l78_A Regulatory protein SPX; 91.5 0.12 4.1E-06 34.2 2.7 65 40-115 2-70 (120)
275 3msz_A Glutaredoxin 1; alpha-b 91.4 0.24 8.1E-06 30.0 3.8 13 42-54 8-20 (89)
276 3nzn_A Glutaredoxin; structura 91.3 0.039 1.3E-06 35.2 0.1 20 39-60 24-43 (103)
277 1t1v_A SH3BGRL3, SH3 domain-bi 90.5 0.82 2.8E-05 28.3 5.9 46 45-93 9-55 (93)
278 2wci_A Glutaredoxin-4; redox-a 90.3 0.2 6.7E-06 34.0 2.9 55 36-101 35-94 (135)
279 3zyw_A Glutaredoxin-3; metal b 90.3 0.35 1.2E-05 31.4 4.0 54 30-94 10-69 (111)
280 3fz4_A Putative arsenate reduc 89.3 0.25 8.6E-06 32.7 2.7 65 40-115 5-73 (120)
281 1aba_A Glutaredoxin; electron 89.3 0.58 2E-05 28.5 4.3 42 44-94 6-57 (87)
282 3ghf_A Septum site-determining 89.2 0.96 3.3E-05 30.0 5.6 54 33-95 45-98 (120)
283 3l9s_A Thiol:disulfide interch 88.9 0.081 2.8E-06 37.8 0.1 39 34-75 20-61 (191)
284 1z3e_A Regulatory protein SPX; 88.8 0.31 1.1E-05 32.7 3.0 64 41-115 4-71 (132)
285 3gkx_A Putative ARSC family re 88.7 0.22 7.6E-06 33.0 2.2 65 41-115 7-74 (120)
286 2jvx_A NF-kappa-B essential mo 88.2 0.25 8.5E-06 24.2 1.6 21 47-68 5-25 (28)
287 2dkh_A 3-hydroxybenzoate hydro 87.8 1.4 4.6E-05 37.3 6.9 124 4-146 467-622 (639)
288 3ipz_A Monothiol glutaredoxin- 86.7 0.84 2.9E-05 29.3 4.0 53 32-94 14-71 (109)
289 3t58_A Sulfhydryl oxidase 1; o 86.3 0.46 1.6E-05 39.4 3.2 38 98-147 187-224 (519)
290 1s3c_A Arsenate reductase; ARS 86.2 0.32 1.1E-05 33.2 1.8 65 41-116 5-73 (141)
291 3rdw_A Putative arsenate reduc 86.1 0.37 1.3E-05 31.9 2.1 64 41-115 8-76 (121)
292 3gx8_A Monothiol glutaredoxin- 86.1 1.1 3.9E-05 29.4 4.5 52 34-95 14-73 (121)
293 1u6t_A SH3 domain-binding glut 85.3 3.4 0.00012 27.3 6.5 45 45-92 7-52 (121)
294 2wem_A Glutaredoxin-related pr 84.6 0.79 2.7E-05 30.1 3.1 54 31-94 15-74 (118)
295 3c7m_A Thiol:disulfide interch 83.0 0.58 2E-05 32.7 2.1 38 35-75 17-55 (195)
296 1pn0_A Phenol 2-monooxygenase; 82.6 3.6 0.00012 34.9 7.2 123 4-146 479-630 (665)
297 4dvc_A Thiol:disulfide interch 82.2 0.31 1.1E-05 33.7 0.3 33 34-68 20-52 (184)
298 1rw1_A Conserved hypothetical 81.4 1.1 3.9E-05 29.0 2.9 60 42-114 4-67 (114)
299 3tdg_A DSBG, putative uncharac 80.3 0.52 1.8E-05 35.9 1.0 36 35-75 147-182 (273)
300 2axo_A Hypothetical protein AT 80.0 4.9 0.00017 30.4 6.3 34 38-75 44-77 (270)
301 3ihg_A RDME; flavoenzyme, anth 79.5 13 0.00045 30.2 9.4 97 4-147 420-516 (535)
302 3l4n_A Monothiol glutaredoxin- 77.9 0.67 2.3E-05 30.9 0.9 56 31-94 9-68 (127)
303 3mjh_B Early endosome antigen 77.8 1.1 3.9E-05 22.8 1.5 20 48-68 8-27 (34)
304 3bci_A Disulfide bond protein 76.8 1 3.5E-05 31.4 1.6 39 35-75 11-51 (186)
305 4f9z_D Endoplasmic reticulum r 74.3 3.6 0.00012 29.6 4.1 31 37-68 132-162 (227)
306 3gn3_A Putative protein-disulf 72.7 1.3 4.4E-05 31.2 1.3 38 37-75 15-52 (182)
307 2kok_A Arsenate reductase; bru 72.3 1 3.4E-05 29.5 0.6 60 42-114 9-72 (120)
308 1nm3_A Protein HI0572; hybrid, 71.7 1.7 5.9E-05 31.6 1.9 12 84-95 185-196 (241)
309 3gha_A Disulfide bond formatio 67.2 1.8 6.1E-05 30.9 1.1 45 28-75 23-69 (202)
310 3f0i_A Arsenate reductase; str 66.8 4.1 0.00014 26.6 2.7 67 40-116 6-76 (119)
311 3ga8_A HTH-type transcriptiona 61.8 2 6.8E-05 26.0 0.4 36 31-67 23-63 (78)
312 3vhs_A ATPase wrnip1; zinc fin 61.3 2 6.7E-05 20.3 0.2 11 47-58 8-18 (29)
313 3gmf_A Protein-disulfide isome 61.0 4.2 0.00014 29.1 2.1 46 27-75 8-55 (205)
314 3ib6_A Uncharacterized protein 59.0 25 0.00085 24.0 5.9 45 56-101 36-83 (189)
315 3f4s_A Alpha-DSBA1, putative u 57.5 3.6 0.00012 30.0 1.2 46 27-75 32-79 (226)
316 2wm8_A MDP-1, magnesium-depend 57.2 30 0.001 23.5 6.0 59 56-115 70-136 (187)
317 2obb_A Hypothetical protein; s 53.9 19 0.00064 24.3 4.3 46 56-104 26-74 (142)
318 1l6r_A Hypothetical protein TA 53.3 30 0.001 24.6 5.6 38 57-95 25-62 (227)
319 3fhk_A UPF0403 protein YPHP; d 53.1 50 0.0017 22.4 6.5 92 61-162 36-137 (147)
320 3fvv_A Uncharacterized protein 51.8 34 0.0012 23.7 5.7 39 56-95 94-132 (232)
321 3o9x_A Uncharacterized HTH-typ 50.7 2.1 7.3E-05 28.2 -0.9 70 31-116 23-98 (133)
322 4g6x_A Glyoxalase/bleomycin re 48.9 53 0.0018 21.4 6.9 61 62-146 90-150 (155)
323 2p9j_A Hypothetical protein AQ 48.2 43 0.0015 21.9 5.5 36 59-95 41-76 (162)
324 1nnl_A L-3-phosphoserine phosp 45.5 26 0.0009 24.2 4.2 39 56-95 88-126 (225)
325 3kzq_A Putative uncharacterize 45.1 12 0.00039 26.4 2.2 32 41-74 6-37 (208)
326 1xhj_A Nitrogen fixation prote 44.9 26 0.00087 21.7 3.5 34 21-60 26-59 (88)
327 2in3_A Hypothetical protein; D 44.8 8.9 0.00031 27.0 1.6 34 40-75 10-43 (216)
328 2fpr_A Histidine biosynthesis 43.7 44 0.0015 22.6 5.1 43 56-101 44-101 (176)
329 2v2f_A Penicillin binding prot 43.2 13 0.00045 17.0 1.6 15 131-145 6-20 (26)
330 3e58_A Putative beta-phosphogl 42.7 50 0.0017 22.0 5.3 59 56-115 91-161 (214)
331 4as2_A Phosphorylcholine phosp 41.5 22 0.00074 27.4 3.4 39 56-95 145-187 (327)
332 2pib_A Phosphorylated carbohyd 40.9 52 0.0018 22.0 5.1 42 56-98 86-127 (216)
333 4hi4_A Aerotaxis transducer AE 40.9 21 0.00071 22.0 2.8 16 131-146 17-32 (121)
334 4gxt_A A conserved functionall 40.7 20 0.00067 28.3 3.1 38 56-94 223-260 (385)
335 3j21_Z 50S ribosomal protein L 40.5 64 0.0022 19.9 7.2 54 59-115 20-77 (99)
336 3m9l_A Hydrolase, haloacid deh 39.8 55 0.0019 22.1 5.1 42 56-98 72-113 (205)
337 3l7t_A SMU.1112C, putative unc 39.5 64 0.0022 19.7 6.6 53 69-144 80-132 (134)
338 3s6j_A Hydrolase, haloacid deh 39.0 56 0.0019 22.3 5.1 59 56-115 93-163 (233)
339 2gjf_A Designed protein; proca 39.0 57 0.002 19.0 4.4 27 74-103 51-77 (78)
340 3a0s_A Sensor protein; PAS-fol 39.0 25 0.00084 19.4 2.7 15 131-145 4-18 (96)
341 2x8g_A Thioredoxin glutathione 38.9 21 0.00073 29.4 3.2 17 36-54 18-34 (598)
342 3cwf_A Alkaline phosphatase sy 38.5 21 0.0007 22.7 2.5 15 131-145 50-64 (122)
343 2gmw_A D,D-heptose 1,7-bisphos 37.7 60 0.002 22.5 5.1 39 56-95 52-105 (211)
344 2nyv_A Pgpase, PGP, phosphogly 36.7 64 0.0022 22.3 5.1 39 56-95 85-123 (222)
345 3um9_A Haloacid dehalogenase, 36.7 68 0.0023 21.8 5.2 59 56-115 98-168 (230)
346 2pr7_A Haloacid dehalogenase/e 36.7 17 0.00058 22.9 1.8 38 56-94 20-57 (137)
347 1k1e_A Deoxy-D-mannose-octulos 36.0 87 0.003 21.0 5.6 35 60-95 41-75 (180)
348 2jad_A Yellow fluorescent prot 35.9 1.8 6.3E-05 34.2 -3.6 16 36-53 261-276 (362)
349 2no4_A (S)-2-haloacid dehaloge 35.6 72 0.0025 22.1 5.3 38 57-95 108-145 (240)
350 3kbb_A Phosphorylated carbohyd 35.4 69 0.0024 21.8 5.1 59 56-115 86-156 (216)
351 1vjq_A Designed protein; struc 35.4 39 0.0013 19.8 3.2 28 74-104 43-70 (79)
352 2c21_A Trypanothione-dependent 35.4 85 0.0029 19.9 6.5 50 70-147 77-127 (144)
353 3a1c_A Probable copper-exporti 35.4 65 0.0022 23.6 5.2 59 56-115 165-224 (287)
354 2hsz_A Novel predicted phospha 35.3 67 0.0023 22.6 5.1 39 56-95 116-154 (243)
355 2j07_A Deoxyribodipyrimidine p 35.0 97 0.0033 24.5 6.4 43 56-101 51-93 (420)
356 2xry_A Deoxyribodipyrimidine p 35.0 1.4E+02 0.0048 24.0 7.4 58 56-116 91-156 (482)
357 3m1y_A Phosphoserine phosphata 35.0 36 0.0012 23.2 3.5 39 56-95 77-115 (217)
358 3si9_A DHDPS, dihydrodipicolin 34.8 1.1E+02 0.0038 23.2 6.4 73 29-111 143-216 (315)
359 3umb_A Dehalogenase-like hydro 34.6 72 0.0025 21.8 5.1 39 56-95 101-139 (233)
360 3b33_A Sensor protein; structu 34.6 28 0.00095 20.7 2.6 15 131-145 19-33 (115)
361 2o2x_A Hypothetical protein; s 34.2 41 0.0014 23.4 3.7 39 56-95 58-111 (218)
362 1zrn_A L-2-haloacid dehalogena 34.0 80 0.0027 21.6 5.3 39 56-95 97-135 (232)
363 3ktb_A Arsenical resistance op 33.9 92 0.0032 19.9 5.0 37 39-75 7-48 (106)
364 2jya_A AGR_C_3324P, uncharacte 33.9 42 0.0014 21.5 3.3 29 72-103 52-80 (106)
365 3kzx_A HAD-superfamily hydrola 32.8 52 0.0018 22.6 4.1 59 56-115 105-175 (231)
366 2vc6_A MOSA, dihydrodipicolina 32.6 1.3E+02 0.0044 22.4 6.5 72 29-110 121-193 (292)
367 2wul_A Glutaredoxin related pr 32.6 78 0.0027 20.4 4.6 52 34-95 18-75 (118)
368 4ex6_A ALNB; modified rossman 31.4 63 0.0022 22.2 4.4 59 56-115 106-176 (237)
369 3b4u_A Dihydrodipicolinate syn 31.3 1.2E+02 0.0043 22.6 6.2 68 35-111 133-201 (294)
370 3mfx_A Sensory BOX/ggdef famil 31.3 35 0.0012 21.8 2.7 16 131-146 19-34 (129)
371 3skx_A Copper-exporting P-type 31.1 87 0.003 22.2 5.2 39 56-95 146-184 (280)
372 3fmw_A Oxygenase; mithramycin, 30.8 31 0.0011 28.5 2.9 35 4-42 445-480 (570)
373 3kd3_A Phosphoserine phosphohy 30.3 65 0.0022 21.6 4.2 39 56-95 84-122 (219)
374 3fg8_A Uncharacterized protein 30.1 36 0.0012 20.7 2.6 16 131-146 24-39 (118)
375 1sji_A Calsequestrin 2, calseq 30.1 44 0.0015 25.4 3.5 22 45-67 254-275 (350)
376 2p25_A Glyoxalase family prote 29.6 94 0.0032 18.7 7.1 53 69-144 72-124 (126)
377 2lju_A Putative oxidoreductase 29.5 50 0.0017 21.3 3.1 25 77-103 64-88 (108)
378 3mxq_A Sensor protein; PSI2, M 29.3 39 0.0013 22.6 2.7 16 131-146 34-49 (152)
379 3iz5_f 60S ribosomal protein L 29.2 1.1E+02 0.0039 19.4 7.2 53 60-115 32-88 (112)
380 3mmz_A Putative HAD family hyd 29.2 70 0.0024 21.5 4.2 33 62-95 47-79 (176)
381 4eze_A Haloacid dehalogenase-l 29.1 80 0.0027 23.8 4.8 39 56-95 181-219 (317)
382 1ecs_A Bleomycin resistance pr 29.1 1E+02 0.0035 18.9 6.7 57 70-147 58-119 (126)
383 3fc7_A HTR-like protein, senso 29.0 42 0.0014 19.9 2.7 15 131-145 31-45 (125)
384 2g2q_A Glutaredoxin-2; thiored 29.0 5.9 0.0002 26.1 -1.4 29 36-66 2-30 (124)
385 3ocu_A Lipoprotein E; hydrolas 28.6 65 0.0022 24.0 4.1 39 56-95 103-145 (262)
386 3sd7_A Putative phosphatase; s 28.3 68 0.0023 22.2 4.1 59 56-115 112-182 (240)
387 1ll8_A PAS kinase; PAS domain, 28.2 45 0.0016 19.8 2.8 15 131-145 10-25 (114)
388 2j4d_A Cryptochrome 3, cryptoc 28.2 1.1E+02 0.0038 25.0 5.8 39 56-95 99-137 (525)
389 2qkp_A Uncharacterized protein 28.0 42 0.0014 22.3 2.7 17 131-147 31-47 (151)
390 1owl_A Photolyase, deoxyribodi 28.0 1.2E+02 0.004 24.6 5.8 43 56-101 56-98 (484)
391 2ehh_A DHDPS, dihydrodipicolin 28.0 1.9E+02 0.0064 21.6 7.0 72 29-110 121-193 (294)
392 4eek_A Beta-phosphoglucomutase 27.6 91 0.0031 21.8 4.7 39 56-95 112-150 (259)
393 3ir9_A Peptide chain release f 27.5 1.1E+02 0.0038 20.9 4.9 45 47-93 105-154 (166)
394 3e8m_A Acylneuraminate cytidyl 27.4 1.1E+02 0.0038 19.9 4.9 33 62-95 39-71 (164)
395 2r8e_A 3-deoxy-D-manno-octulos 27.4 91 0.0031 21.1 4.5 33 62-95 61-93 (188)
396 1meo_A Phosophoribosylglycinam 27.3 89 0.003 22.3 4.5 19 84-104 70-88 (209)
397 3kzq_A Putative uncharacterize 27.2 16 0.00056 25.6 0.5 18 126-146 169-186 (208)
398 1nwz_A PYP, photoactive yellow 27.0 48 0.0016 21.7 2.8 17 131-147 29-45 (125)
399 3brc_A Conserved protein of un 26.8 1.1E+02 0.0039 20.7 4.6 29 132-160 112-140 (156)
400 1np7_A DNA photolyase; protein 26.7 1.1E+02 0.0037 24.8 5.4 39 56-95 64-102 (489)
401 3na8_A Putative dihydrodipicol 26.4 1.9E+02 0.0066 21.8 6.5 72 29-110 145-217 (315)
402 2kpo_A Rossmann 2X2 fold prote 26.4 1.1E+02 0.0039 18.5 5.3 10 58-67 37-46 (110)
403 1u07_A TONB protein; beta-hair 26.3 47 0.0016 20.0 2.5 16 132-147 30-45 (90)
404 3pct_A Class C acid phosphatas 26.2 83 0.0028 23.4 4.3 39 56-95 103-145 (260)
405 2xsa_A Ogoga, hyaluronoglucosa 26.1 1.9E+02 0.0065 23.4 6.6 57 47-104 48-116 (447)
406 3olo_A Two-component sensor hi 26.1 47 0.0016 19.4 2.5 15 131-145 25-39 (118)
407 3twl_A Formamidopyrimidine-DNA 26.1 19 0.00063 27.7 0.7 18 45-63 269-286 (310)
408 2z1d_A Hydrogenase expression/ 26.0 95 0.0032 24.5 4.6 35 29-67 50-84 (372)
409 1qyi_A ZR25, hypothetical prot 26.0 1.2E+02 0.0041 23.8 5.4 43 56-99 217-259 (384)
410 3i10_A Putative glycerophospho 25.8 85 0.0029 23.4 4.3 32 61-95 245-277 (278)
411 1mzu_A PPR; photoactive yellow 25.5 53 0.0018 21.7 2.8 17 131-147 34-50 (129)
412 3cnh_A Hydrolase family protei 25.3 1.1E+02 0.0037 20.3 4.6 38 56-95 88-125 (200)
413 3r6a_A Uncharacterized protein 25.3 1.1E+02 0.0038 19.7 4.5 52 72-147 67-118 (144)
414 1jkx_A GART;, phosphoribosylgl 25.0 98 0.0034 22.1 4.4 16 131-146 135-153 (212)
415 2gj3_A Nitrogen fixation regul 24.8 51 0.0018 19.8 2.6 15 131-145 17-31 (120)
416 3n1u_A Hydrolase, HAD superfam 24.7 1.2E+02 0.0041 20.7 4.8 32 63-95 55-86 (191)
417 3us3_A Calsequestrin-1; calciu 24.7 40 0.0014 26.0 2.4 10 130-139 310-319 (367)
418 4a18_G RPL30; ribosome, eukary 24.6 1.3E+02 0.0045 18.6 7.9 53 60-115 28-84 (104)
419 3ilx_A First ORF in transposon 24.6 1.4E+02 0.0048 19.6 4.9 47 56-104 49-100 (143)
420 2hoq_A Putative HAD-hydrolase 24.4 1.1E+02 0.0039 21.1 4.7 59 56-115 96-166 (241)
421 1te2_A Putative phosphatase; s 24.3 1.5E+02 0.0052 19.7 5.3 38 57-95 97-134 (226)
422 2rk9_A Glyoxalase/bleomycin re 24.3 1.4E+02 0.0047 18.9 4.8 62 69-147 73-135 (145)
423 3n28_A Phosphoserine phosphata 24.3 1.3E+02 0.0044 22.5 5.2 25 70-95 70-94 (335)
424 2ywr_A Phosphoribosylglycinami 24.2 1.2E+02 0.0041 21.6 4.7 16 131-146 136-154 (216)
425 3zxs_A Cryptochrome B, rscryb; 24.0 1.8E+02 0.006 24.1 6.1 47 56-105 66-119 (522)
426 1d06_A Nitrogen fixation regul 23.9 58 0.002 19.9 2.7 15 131-145 28-42 (130)
427 1u3d_A Cryptochrome 1 apoprote 23.8 1.9E+02 0.0065 23.4 6.4 43 56-101 64-107 (509)
428 3mn1_A Probable YRBI family ph 23.8 1.2E+02 0.0042 20.5 4.6 33 62-95 54-86 (189)
429 2om6_A Probable phosphoserine 23.7 1.6E+02 0.0055 19.8 5.3 60 56-116 101-175 (235)
430 3flu_A DHDPS, dihydrodipicolin 23.6 2E+02 0.0068 21.5 6.1 72 29-111 128-200 (297)
431 2zos_A MPGP, mannosyl-3-phosph 23.5 1.1E+02 0.0036 21.8 4.4 35 60-95 23-57 (249)
432 3vk8_A Probable formamidopyrim 23.4 19 0.00067 27.4 0.3 9 46-54 280-288 (295)
433 1wr8_A Phosphoglycolate phosph 23.4 1.9E+02 0.0065 20.1 7.7 38 57-95 23-60 (231)
434 3m2o_A Glyoxalase/bleomycin re 23.1 1.6E+02 0.0056 19.2 6.1 51 74-147 94-144 (164)
435 3qze_A DHDPS, dihydrodipicolin 23.1 2.3E+02 0.0078 21.4 6.4 72 29-111 144-216 (314)
436 3av3_A Phosphoribosylglycinami 23.1 1.1E+02 0.0038 21.7 4.4 16 131-146 138-156 (212)
437 2r78_A Sensor protein; sensory 23.0 57 0.0019 19.7 2.5 15 131-145 23-37 (117)
438 3luq_A Sensor protein; PAS, hi 23.0 66 0.0023 18.4 2.8 15 131-145 15-29 (114)
439 1o5k_A DHDPS, dihydrodipicolin 23.0 1.7E+02 0.0057 22.0 5.5 67 35-110 138-208 (306)
440 2lci_A Protein OR36; structura 23.0 1.5E+02 0.005 18.6 6.3 56 56-112 35-93 (134)
441 4g6v_A Adhesin/hemolysin; tRNA 22.7 85 0.0029 21.9 3.4 15 132-146 159-173 (176)
442 3sk2_A EHPR; antibiotic resist 22.7 1.4E+02 0.0049 18.4 4.7 17 130-146 114-130 (132)
443 3mc1_A Predicted phosphatase, 22.6 80 0.0027 21.4 3.5 59 56-115 88-158 (226)
444 3n28_A Phosphoserine phosphata 22.5 1.3E+02 0.0043 22.5 4.8 39 56-95 180-218 (335)
445 2hcf_A Hydrolase, haloacid deh 22.3 1.2E+02 0.004 20.6 4.4 42 56-98 95-137 (234)
446 2i33_A Acid phosphatase; HAD s 22.2 97 0.0033 22.7 4.0 39 56-95 103-144 (258)
447 3umv_A Deoxyribodipyrimidine p 22.2 1.8E+02 0.0063 23.7 6.0 37 57-95 95-131 (506)
448 1xky_A Dihydrodipicolinate syn 22.1 2.5E+02 0.0084 21.0 6.3 72 29-111 133-205 (301)
449 2k9k_A TONB2; metal transport; 22.0 72 0.0025 19.7 2.8 16 132-147 45-60 (106)
450 2hi0_A Putative phosphoglycola 21.7 1.1E+02 0.0037 21.3 4.1 58 56-115 112-181 (240)
451 3l8h_A Putative haloacid dehal 21.6 1.8E+02 0.0061 19.0 5.8 37 56-93 29-80 (179)
452 4hyl_A Stage II sporulation pr 21.6 1.4E+02 0.0048 18.3 4.3 64 37-106 44-107 (117)
453 3rri_A Glyoxalase/bleomycin re 21.5 1.5E+02 0.0051 18.2 5.0 18 130-147 111-128 (135)
454 1dnp_A DNA photolyase; DNA rep 21.5 1.3E+02 0.0044 24.3 4.9 39 56-95 55-97 (471)
455 3p96_A Phosphoserine phosphata 21.4 1.3E+02 0.0045 23.3 4.9 39 56-95 258-296 (415)
456 2qa2_A CABE, polyketide oxygen 21.4 85 0.0029 25.3 3.8 34 4-42 395-429 (499)
457 3n07_A 3-deoxy-D-manno-octulos 21.3 1.5E+02 0.005 20.5 4.7 50 63-115 61-115 (195)
458 3vol_A Aerotaxis transducer AE 21.3 63 0.0021 22.9 2.7 16 131-146 34-49 (233)
459 2l4c_A Endoplasmic reticulum r 21.3 1.7E+02 0.0058 18.7 6.5 25 37-66 41-65 (124)
460 3j08_A COPA, copper-exporting 21.3 1.4E+02 0.0047 25.2 5.2 38 57-95 460-497 (645)
461 3mjq_A Uncharacterized protein 21.2 72 0.0025 18.7 2.7 16 131-146 11-26 (126)
462 3p9x_A Phosphoribosylglycinami 21.2 1.4E+02 0.0046 21.4 4.5 16 131-146 137-155 (211)
463 2wq7_A RE11660P; lyase-DNA com 21.1 1.3E+02 0.0043 24.8 4.8 39 56-95 88-126 (543)
464 3lyx_A Sensory BOX/ggdef domai 21.1 76 0.0026 18.1 2.8 15 131-145 19-33 (124)
465 3nvb_A Uncharacterized protein 21.1 3.1E+02 0.01 21.6 8.5 59 56-115 258-327 (387)
466 3nuq_A Protein SSM1, putative 21.0 1.9E+02 0.0066 20.5 5.5 42 56-98 144-187 (282)
467 3u5e_c L32, RP73, YL38, 60S ri 20.9 1.6E+02 0.0055 18.3 7.1 53 60-115 28-84 (105)
468 3bwl_A Sensor protein; structu 20.9 68 0.0023 19.2 2.6 15 131-145 29-43 (126)
469 3qfe_A Putative dihydrodipicol 20.9 2.8E+02 0.0094 21.0 8.0 74 29-111 134-209 (318)
470 3eb2_A Putative dihydrodipicol 20.7 2.7E+02 0.0092 20.8 6.6 72 29-111 125-197 (300)
471 1f9z_A Glyoxalase I; beta-alph 20.7 1.5E+02 0.0053 18.0 7.2 56 70-147 71-126 (135)
472 3kgk_A Arsenical resistance op 20.6 1.3E+02 0.0044 19.3 3.8 55 41-95 6-71 (110)
473 1wdv_A Hypothetical protein AP 20.5 1.9E+02 0.0063 18.9 7.2 51 83-144 3-58 (152)
474 2qqz_A Glyoxalase family prote 20.4 1.6E+02 0.0053 17.9 7.1 52 70-146 72-123 (126)
475 3tak_A DHDPS, dihydrodipicolin 20.3 2E+02 0.0068 21.4 5.5 72 29-111 122-194 (291)
476 3dao_A Putative phosphatse; st 20.2 1.3E+02 0.0045 21.7 4.4 39 56-95 41-79 (283)
477 3ij5_A 3-deoxy-D-manno-octulos 20.1 1.6E+02 0.0055 20.6 4.7 33 62-95 84-116 (211)
No 1
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=100.00 E-value=2.6e-38 Score=226.31 Aligned_cols=151 Identities=23% Similarity=0.326 Sum_probs=124.6
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
..|++|+++|+|+ +.+.+|+. ++|+++ +||++||+||+++|||+|+.+ +|.|++++++++++|+.+++ ||.|+
T Consensus 2 ~~l~vG~~aPdF~--l~~~~G~~--~~l~d~-~Gk~vvl~f~~~~~c~~C~~e-~~~l~~~~~~~~~~~~~~v~-vs~d~ 74 (157)
T 4g2e_A 2 HMVEIGELAPDFE--LPDTELKK--VKLSAL-KGKVVVLAFYPAAFTQVCTKE-MCTFRDSMAKFNQVNAVVLG-ISVDP 74 (157)
T ss_dssp CCCCTTSBCCCCE--EEBTTSCE--EEGGGG-TTSCEEEEECSCTTCCC-------CCSCGGGGGGGCSSEEEE-EESSC
T ss_pred CcCCCCCCCcCeE--eECCCCCE--EeHHHH-CCCeEEEEecCCCCCCccccc-hhhcccccccccccCceEee-ecccc
Confidence 3689999999999 56889988 999999 799999999999999999997 99999999999999999999 99999
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHH
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDML 161 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l 161 (164)
++.+++|+++++++ |++++|++++++++||+...... ..+..++.|++||||++|+|++.++++. +..++++++++
T Consensus 75 ~~~~~~~~~~~~~~--~p~l~D~~~~v~~~ygv~~~~~~-~~~~~~~~p~tflID~~G~I~~~~~~~~-~~~~~~~~eil 150 (157)
T 4g2e_A 75 PFSNKAFKEHNKLN--FTILSDYNREVVKKYNVAWEFPA-LPGYVLAKRAVFVIDKEGKVRYKWVSDD-PTKEPPYDEIE 150 (157)
T ss_dssp HHHHHHHHHHTTCC--SEEEECTTSHHHHHTTCEEECTT-STTCEEECEEEEEECTTSBEEEEEEESS-TTCCCCHHHHH
T ss_pred hhHHHHHHHHcCCc--EEEEEcCCcHHHHHcCCcccccc-CCCcceeeeeEEEECCCCEEEEEEECCC-CCCCCCHHHHH
Confidence 99999999999999 99999999999999999764221 1222346688999999999999999864 34556666665
Q ss_pred hh
Q 045485 162 KA 163 (164)
Q Consensus 162 ~~ 163 (164)
+.
T Consensus 151 ~~ 152 (157)
T 4g2e_A 151 KV 152 (157)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 2
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=100.00 E-value=1.9e-38 Score=228.79 Aligned_cols=151 Identities=23% Similarity=0.367 Sum_probs=131.2
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhc-CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLT-SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~-~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
.+++|+++|+|+ +.+.+|+. ++|+++. +||++||+|||++|||+|+.+ ++.|++++++|+++|+.+++ ||.|+
T Consensus 4 ml~vG~~aPdF~--l~~~~G~~--v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e-~~~l~~~~~~~~~~~v~vv~-is~d~ 77 (164)
T 4gqc_A 4 LVELGEKAPDFT--LPNQDFEP--VNLYEVLKRGRPAVLIFFPAAFSPVCTKE-LCTFRDKMAQLEKANAEVLA-ISVDS 77 (164)
T ss_dssp CCCTTSBCCCCE--EEBTTSCE--EEHHHHHHTSSCEEEEECSCTTCCEECSS-CEESCCCGGGGGGSSSEEEE-EESSC
T ss_pred cccCCCCCcCcE--eECCCCCE--EEHHHHhcCCCEEEEEEeCCCCCCCcccc-hhhhhhhHHHhhccCceEEE-ecCCC
Confidence 589999999999 46889988 9999984 588999999999999999997 99999999999999999999 99999
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHH
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDML 161 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l 161 (164)
++.+++|+++++++ ||+++|++++++++||+......+ .. +++.|++||||++|+|++.+++++ +..+++++++|
T Consensus 78 ~~~~~~~~~~~~~~--fp~l~D~~~~v~~~ygv~~~~~~~-~~-~~~~p~tflID~~G~I~~~~~~~~-~~~~~~~~eil 152 (164)
T 4gqc_A 78 PWCLKKFKDENRLA--FNLLSDYNREVIKLYNVYHEDLKG-LK-MVAKRAVFIVKPDGTVAYKWVTDN-PLNEPDYDEVV 152 (164)
T ss_dssp HHHHHHHHHHTTCC--SEEEECTTSHHHHHTTCEEEEETT-EE-EEECCEEEEECTTSBEEEEEECSC-TTCCCCHHHHH
T ss_pred HHHHHHHHHhcCcc--cceeecCchHHHHHcCCccccccc-Cc-CCeeeEEEEECCCCEEEEEEEeCC-CCCCCCHHHHH
Confidence 99999999999999 999999999999999997531111 01 245688999999999999999864 46677888888
Q ss_pred hhC
Q 045485 162 KAL 164 (164)
Q Consensus 162 ~~l 164 (164)
++|
T Consensus 153 ~~l 155 (164)
T 4gqc_A 153 REA 155 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 3
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=100.00 E-value=1.6e-35 Score=215.42 Aligned_cols=157 Identities=43% Similarity=0.696 Sum_probs=131.8
Q ss_pred CCCCCCCCCCCeeeeee-cCCCceeeeehhhhcCCCcEEEEEecCCCCcCCC-cCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 2 AAISVGDKLPDATLSYF-DSAGELQTITVSDLTSNKKAILFAVPGAFTPTCS-QKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~-~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
.++++|+++|+|++ . +.+|+. ++|+++.+||++||+|||++|||+|+ .| +|.|++++++|+++|+.+|++||.
T Consensus 13 ~~~~vG~~aPdf~l--~~~~~g~~--v~L~d~~~gk~vvL~f~pa~wcp~C~~~e-~p~l~~~~~~~~~~gv~vv~~iS~ 87 (173)
T 3mng_A 13 APIKVGDAIPAVEV--FEGEPGNK--VNLAELFKGKKGVLFGVPGAFTPGCSKTH-LPGFVEQAEALKAKGVQVVACLSV 87 (173)
T ss_dssp CCCCTTCBCCCCEE--ECSSTTCE--EEHHHHTTTSEEEEEECSCTTCHHHHHTH-HHHHHHTHHHHHTTTCCEEEEEES
T ss_pred CCCCCCCCCCCeEe--eeCCCCCE--EEhHHHhCCCcEEEEEEeCCCCCCCCHHH-HHHHHHHHHHHHhCCCEEEEEEcC
Confidence 56899999999995 5 778887 99999437999999999999999999 57 999999999999999999977999
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCC-CCCCCCcceeEEEEEecCCcEEEEEeecCC-ceeecCH
Q 045485 80 NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSD-KPMGLGVRSRRYALLAENGVVKVLNLEEGG-AFTFSGA 157 (164)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~-~~~~~~~~~p~~~lid~~G~I~~~~~~~~~-~~~~~~~ 157 (164)
|+++.+++|+++++++.+|++++|++++++++||+...... +..+.....|++|||| +|+|+++++++.+ ....+++
T Consensus 88 D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~ 166 (173)
T 3mng_A 88 NDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLA 166 (173)
T ss_dssp SCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSH
T ss_pred CCHHHHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHH
Confidence 99999999999999743499999999999999999753100 0001013458899999 9999999999642 4567899
Q ss_pred HHHHhhC
Q 045485 158 EDMLKAL 164 (164)
Q Consensus 158 ~~~l~~l 164 (164)
+++|++|
T Consensus 167 ~~vl~~l 173 (173)
T 3mng_A 167 PNIISQL 173 (173)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999986
No 4
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=100.00 E-value=2e-35 Score=212.16 Aligned_cols=153 Identities=54% Similarity=0.882 Sum_probs=130.6
Q ss_pred CCCCCCCCCCCeeeeeecCCC--ceeeeehhh-hcCCCcEEEEEecCCCCcCCC-cCchhhHHHhHHHHHhCCCc-EEEE
Q 045485 2 AAISVGDKLPDATLSYFDSAG--ELQTITVSD-LTSNKKAILFAVPGAFTPTCS-QKHLPGFVEKSAELKSKGVD-IVAC 76 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g--~~~~~~l~d-~~~g~~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~~~~~v~-vi~~ 76 (164)
|.+++|+++|+|++++.+.+| +. ++|++ + +||++||+||+++|||+|+ .+ +|.|++++++|+++|+. +++
T Consensus 2 m~~~~G~~aP~f~l~~~~~~G~~~~--~~l~~~~-~gk~vvl~f~~~~~c~~C~~~e-~~~l~~~~~~~~~~~v~~vv~- 76 (162)
T 1tp9_A 2 APIAVGDVLPDGKLAYFDEQDQLQE--VSVHSLV-AGKKVILFGVPGAFTPTCSLKH-VPGFIEKAGELKSKGVTEILC- 76 (162)
T ss_dssp CCCCTTCBCCCCEEEEECTTSCEEE--EESHHHH-TTSEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHHTTCCCEEE-
T ss_pred CcCCCCCCCCCeEEEeecCCCCcee--EeHHHHh-CCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCEEEE-
Confidence 678999999999975567889 66 99999 7 7999999999999999999 87 99999999999999999 999
Q ss_pred EecCCHHHHHHHHHHhCC--CCceEEEEeCcchHHHHhCCccccCCCCCCCC-cceeEEEEEecCCcEEEEEeecCCcee
Q 045485 77 ISVNDAFVMKAWKENLGI--NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLG-VRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 77 is~d~~~~~~~~~~~~~~--~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~-~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
||.|+++.+++|++++++ + |++++|+++.++++||+...... .+++ .+.|++|||| +|+|++.++++.+...
T Consensus 77 Is~d~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~--~g~~~~~~p~~~vid-~G~i~~~~~~~~~~~~ 151 (162)
T 1tp9_A 77 ISVNDPFVMKAWAKSYPENKH--VKFLADGSATYTHALGLELDLQE--KGLGTRSRRFALLVD-DLKVKAANIEGGGEFT 151 (162)
T ss_dssp EESSCHHHHHHHHHTCTTCSS--EEEEECTTSHHHHHTTCEEEETT--TTSEEEECCEEEEEE-TTEEEEEEECSSSCCS
T ss_pred EECCCHHHHHHHHHhcCCCCC--eEEEECCCchHHHHcCccccccc--CCCCccceeEEEEEE-CCEEEEEEeeCCCCCc
Confidence 999999999999999999 8 99999999999999999743111 1111 2357899999 9999999987622233
Q ss_pred ecCHHHHHhhC
Q 045485 154 FSGAEDMLKAL 164 (164)
Q Consensus 154 ~~~~~~~l~~l 164 (164)
.++++++|++|
T Consensus 152 ~~~~~~vl~~l 162 (162)
T 1tp9_A 152 VSSAEDILKDL 162 (162)
T ss_dssp SCSHHHHHTTC
T ss_pred cCCHHHHHhhC
Confidence 45899999886
No 5
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-35 Score=221.41 Aligned_cols=148 Identities=19% Similarity=0.348 Sum_probs=127.7
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
|.+++|++||||+++.. .||+..+++|+|+ +||++||+|||+.|||+|..| ++.|++.+++|+++|+.+|+ ||.|+
T Consensus 21 M~~~VG~~APdF~l~a~-~d~~~~~vsLsd~-~GK~vVL~FyP~d~TpvCt~E-~~~f~~~~~~f~~~g~~vig-iS~Ds 96 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAV-VDGVFDEVSLDKY-KGKYVVLAFIPLAFTFVSPTE-IIAFSEAAKKFEEQGAQVLF-ASTDS 96 (216)
T ss_dssp -CCCTTSBCCCCCEEEE-ETTEEEEECGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHHHHHHHHTTEEEEE-EESSC
T ss_pred chhhcCCcCCCCCCcce-ECCCCcEEehHHh-CCCeEEEEEEcCCCCCcCchh-hhHHHHhHHhhccCCceEEE-eecCc
Confidence 67899999999997532 1444445999999 799999999999999999998 99999999999999999999 99999
Q ss_pred HHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceee
Q 045485 82 AFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTF 154 (164)
Q Consensus 82 ~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~ 154 (164)
++.+++|.++. +++ ||+++|++++++++||+..+. .|++.|++||||++|+|+++++++.+ ..
T Consensus 97 ~~sh~aw~~~~~~~~~~~~l~--fpllsD~~~~vak~YGv~~~~------~g~~~R~tFiID~~G~Ir~~~v~~~~--~g 166 (216)
T 3sbc_A 97 EYSLLAWTNIPRKEGGLGPIN--IPLLADTNHSLSRDYGVLIEE------EGVALRGLFIIDPKGVIRHITINDLP--VG 166 (216)
T ss_dssp HHHHHHHHTSCGGGTCCCSCS--SCEEECTTSHHHHHHTCEETT------TTEECEEEEEECTTSBEEEEEEECTT--BC
T ss_pred hhhHHHHHHHHHHhCCccCcc--cceEeCCCCHHHHHcCCeecc------CCceeeEEEEECCCCeEEEEEEcCCC--CC
Confidence 99999999765 356 999999999999999998641 25777999999999999999998642 35
Q ss_pred cCHHHHHhh
Q 045485 155 SGAEDMLKA 163 (164)
Q Consensus 155 ~~~~~~l~~ 163 (164)
++++++|+.
T Consensus 167 rn~dEiLr~ 175 (216)
T 3sbc_A 167 RNVDEALRL 175 (216)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 688888865
No 6
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.7e-35 Score=215.39 Aligned_cols=153 Identities=49% Similarity=0.766 Sum_probs=131.0
Q ss_pred CCCCCCCCCCCeeeeeecC--CC-ceeeeehhh-hcCCCcEEEEEecCCCCcCCCc-CchhhHHHhHHHHHhCCCc-EEE
Q 045485 2 AAISVGDKLPDATLSYFDS--AG-ELQTITVSD-LTSNKKAILFAVPGAFTPTCSQ-KHLPGFVEKSAELKSKGVD-IVA 75 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~--~g-~~~~~~l~d-~~~g~~vvl~f~~~~~cp~C~~-~~l~~l~~~~~~~~~~~v~-vi~ 75 (164)
|++++|+++|+|+++ +. +| +. ++|++ + +||++||+|||++|||+|+. | +|.|++++++|+++|+. |++
T Consensus 24 ~~l~vG~~aPdf~l~--~~~~~G~~~--v~L~d~~-~Gk~vvL~f~~a~wcp~C~~~e-~p~l~~~~~~~~~~gv~~vv~ 97 (184)
T 3uma_A 24 MTIAVGDKLPNATFK--EKTADGPVE--VTTELLF-KGKRVVLFAVPGAFTPTCSLNH-LPGYLENRDAILARGVDDIAV 97 (184)
T ss_dssp SCCCTTCBCCCCEEE--EEETTEEEE--EEHHHHH-TTSEEEEEEESCTTCHHHHHTH-HHHHHHTHHHHHTTTCCEEEE
T ss_pred CcCCCCCCCCCcEee--cccCCCceE--EeHHHHh-CCCCEEEEEEcCCCCCCcCHHH-HHHHHHHHHHHHHcCCCEEEE
Confidence 568999999999964 54 67 65 99999 7 79999999999999999999 7 99999999999999999 999
Q ss_pred EEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCc-ceeEEEEEecCCcEEEEEeec-CCcee
Q 045485 76 CISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGV-RSRRYALLAENGVVKVLNLEE-GGAFT 153 (164)
Q Consensus 76 ~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~-~~p~~~lid~~G~I~~~~~~~-~~~~~ 153 (164)
||.|+++.+++|+++++++.+|++++|+++.++++||+...... .+++. ..|++|||| +|+|+++++++ .+..+
T Consensus 98 -Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~--~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~~~ 173 (184)
T 3uma_A 98 -VAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEIDLSA--GTLGIRSKRYSMLVE-DGVVKALNIEESPGQAT 173 (184)
T ss_dssp -EESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEEEEGG--GTCEEEECCEEEEEE-TTEEEEEEECSSTTCCS
T ss_pred -EECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcCCceeccc--cCCcccceeEEEEEC-CCEEEEEEEeCCCCCCc
Confidence 99999999999999999753499999999999999999754211 11122 347899996 99999999996 35678
Q ss_pred ecCHHHHHhhC
Q 045485 154 FSGAEDMLKAL 164 (164)
Q Consensus 154 ~~~~~~~l~~l 164 (164)
.++++++|++|
T Consensus 174 ~~~~~~vL~~L 184 (184)
T 3uma_A 174 ASGAAAMLELL 184 (184)
T ss_dssp TTSHHHHHHHC
T ss_pred CCCHHHHHhhC
Confidence 89999999986
No 7
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=100.00 E-value=3.8e-34 Score=214.40 Aligned_cols=147 Identities=16% Similarity=0.296 Sum_probs=127.1
Q ss_pred CCCCCCCCCCeeeee--ecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 3 AISVGDKLPDATLSY--FDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~--~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
.+++|++||||+++. .|.+|+. ++|+|| +||++||+|||+.|||+|..| +..|++++++|+++|+.||+ ||.|
T Consensus 25 ~~~vG~~APdF~~~a~l~d~~g~~--vsLsd~-~GK~vVL~FyP~d~TpvCt~E-~~~f~~~~~eF~~~g~~vig-iS~D 99 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPNGSFKK--ISLSSY-KGKWVVLFFYPLDFTFVCPTE-VIAFSDSVSRFNELNCEVLA-CSID 99 (219)
T ss_dssp CCCTTSBCCCCEEEEECTTSCEEE--EEGGGG-TTSEEEEEECSCTTCSSCCHH-HHHHHTTHHHHHTTTEEEEE-EESS
T ss_pred ccccCCcCCCCcccccccCCCCcE--EehHHh-CCCEEEEEEecccCCCCCchh-HhhHHHHHhhhccCCcEEEE-eeCC
Confidence 368999999999653 3445554 999999 799999999999999999998 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCcee
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
+.+.+++|.++. +++ ||+++|++++++++||+..+. .+++.|++||||++|+|+++++++. ..
T Consensus 100 s~~sh~~w~~~~~~~~~~~~l~--fpllsD~~~~va~~yGv~~~~------~g~~~R~tFiIDp~g~Ir~~~~~~~--~~ 169 (219)
T 3tue_A 100 SEYAHLQWTLQDRKKGGLGTMA--IPILADKTKNIARSYGVLEES------QGVAYRGLFIIDPHGMLRQITVNDM--PV 169 (219)
T ss_dssp CHHHHHHHHHSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETT------TTEECEEEEEECTTSBEEEEEEECT--TC
T ss_pred chhhHHHHhhhhHHhcCccccc--cccccCcccHHHHHcCCcccC------CCeeEEEEEEECCCCeEEEEEEecC--CC
Confidence 999999999774 466 999999999999999997541 2577799999999999999998753 34
Q ss_pred ecCHHHHHhhC
Q 045485 154 FSGAEDMLKAL 164 (164)
Q Consensus 154 ~~~~~~~l~~l 164 (164)
..+++++|+.|
T Consensus 170 gr~~~EvLr~l 180 (219)
T 3tue_A 170 GRSVEEVLRLL 180 (219)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 56888887753
No 8
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=4.9e-34 Score=207.44 Aligned_cols=158 Identities=42% Similarity=0.726 Sum_probs=134.9
Q ss_pred CCCCCCCCCCCeeeeeecCC------CceeeeehhhhcCCCcEEEEEecCCCCcCCCc-CchhhHHHhHHHHHhCCC-cE
Q 045485 2 AAISVGDKLPDATLSYFDSA------GELQTITVSDLTSNKKAILFAVPGAFTPTCSQ-KHLPGFVEKSAELKSKGV-DI 73 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~------g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~-~~l~~l~~~~~~~~~~~v-~v 73 (164)
+.+++|+++|++++...+.+ |...+++|+++.+||++||+|||++|||+|.. | ++.|++.+++|+++|+ +|
T Consensus 8 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~E-l~~f~~~~~ef~~~g~d~V 86 (176)
T 4f82_A 8 HMIQVGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQH-VPGYVEHAEQLRAAGIDEI 86 (176)
T ss_dssp CCCCTTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTH-HHHHHHHHHHHHHTTCCEE
T ss_pred hhhhcCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHH-HHHHHHHHHHHHhCCCCEE
Confidence 46899999999998655431 46668999997578999999999999999999 8 9999999999999999 89
Q ss_pred EEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCc-ceeEEEEEecCCcEEEEEeecCCce
Q 045485 74 VACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGV-RSRRYALLAENGVVKVLNLEEGGAF 152 (164)
Q Consensus 74 i~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~-~~p~~~lid~~G~I~~~~~~~~~~~ 152 (164)
++ ||.|+++.+++|.++++++.+|++++|++++++++||+..+.. ..|+|. ..|++||| ++|+|+++++++.+..
T Consensus 87 ig-IS~D~~~~~~~f~~~~~l~~~f~lLsD~~~~va~ayGv~~~~~--~~G~g~~s~R~tfII-~dG~I~~~~~~~~~~~ 162 (176)
T 4f82_A 87 WC-VSVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLS--ARGMGIRSLRYAMVI-DGGVVKTLAVEAPGKF 162 (176)
T ss_dssp EE-EESSCHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECG--GGTCCEEECCEEEEE-ETTEEEEEEECCTTCC
T ss_pred EE-EeCCCHHHHHHHHHHhCCCCCceEEEcCchHHHHHhCCCcccc--ccCCCcccccEEEEE-cCCEEEEEEEcCCCCc
Confidence 99 9999999999999999875359999999999999999976421 122233 35889999 9999999999876667
Q ss_pred eecCHHHHHhhC
Q 045485 153 TFSGAEDMLKAL 164 (164)
Q Consensus 153 ~~~~~~~~l~~l 164 (164)
..++++++|++|
T Consensus 163 ~~~~a~~vL~~L 174 (176)
T 4f82_A 163 EVSDAASVLATL 174 (176)
T ss_dssp SSSSHHHHHHTC
T ss_pred chhhHHHHHHHh
Confidence 788999999876
No 9
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=100.00 E-value=8.3e-34 Score=205.10 Aligned_cols=155 Identities=45% Similarity=0.728 Sum_probs=128.7
Q ss_pred CCCCCCCCCCCeeeeee-cCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCc-CchhhHHHhHHHHHhCCC-cEEEEEe
Q 045485 2 AAISVGDKLPDATLSYF-DSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQ-KHLPGFVEKSAELKSKGV-DIVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~-~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~-~~l~~l~~~~~~~~~~~v-~vi~~is 78 (164)
|++++|+++|+|+ +. +.+|+. ++|+++.+||++||+|||++|||+|+. | +|.|++++++|+++|+ .||+ ||
T Consensus 1 m~l~~G~~aP~f~--l~~~~~G~~--v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e-~p~l~~~~~~~~~~gv~~vv~-Is 74 (167)
T 2wfc_A 1 MPIKEGDKLPAVT--VFGATPNDK--VNMAELFAGKKGVLFAVPGAFTPGSSKTH-LPGYVEQAAAIHGKGVDIIAC-MA 74 (167)
T ss_dssp -CCCTTCBCCCCE--EESSSTTCE--EEHHHHTTTSEEEEEEESCTTCHHHHHTH-HHHHHHTHHHHHHTTCCEEEE-EE
T ss_pred CCCCCCCcCCCcE--eecCCCCcE--EeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCEEEE-Ee
Confidence 5789999999999 45 778887 999998558999999999999999998 8 9999999999999999 9999 99
Q ss_pred cCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCC-ceeecCH
Q 045485 79 VNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGG-AFTFSGA 157 (164)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~-~~~~~~~ 157 (164)
.|+++.+++|+++++++..|++++|++++++++||+..... ...+...+.|++||| ++|+|++.++++++ ..+...+
T Consensus 75 ~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~~gv~~~~~-~~~g~~~~~p~t~lI-~~G~I~~~~~~~~~~~~~~~~~ 152 (167)
T 2wfc_A 75 VNDSFVMDAWGKAHGADDKVQMLADPGGAFTKAVDMELDLS-AVLGNVRSKRYSLVI-EDGVVTKVNVEPDGKGLTCSLA 152 (167)
T ss_dssp SSCHHHHHHHHHHTTCTTTSEEEECTTSHHHHHTTCEECCH-HHHSSCEECCEEEEE-ETTEEEEEEECTTSSSSSTTSH
T ss_pred CCCHHHHHHHHHhcCCCcceEEEECCCCcHHHHcCCccccc-cccCcccceEEEEEE-eCCEEEEEEecCCCCcceeccH
Confidence 99999999999999875349999999999999999974310 000101234789999 99999999998643 3557789
Q ss_pred HHHHhhC
Q 045485 158 EDMLKAL 164 (164)
Q Consensus 158 ~~~l~~l 164 (164)
|.+|+.|
T Consensus 153 ~~~~~~~ 159 (167)
T 2wfc_A 153 PNILSQL 159 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998764
No 10
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=100.00 E-value=4.7e-33 Score=200.07 Aligned_cols=148 Identities=22% Similarity=0.294 Sum_probs=127.5
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
+.+++|+++|+|++ .+.+|+. ++|+++ +||++||+||+++|||+|..+ ++.|+++++++ +++++|+ ||.|+
T Consensus 15 ~~~~~G~~~P~f~l--~~~~G~~--v~l~~~-~gk~vvl~f~~~~~c~~C~~e-~~~l~~~~~~~--~~v~vv~-Is~d~ 85 (165)
T 1q98_A 15 HFPQVGEIVENFIL--VGNDLAD--VALNDF-ASKRKVLNIFPSIDTGVCATS-VRKFNQQAAKL--SNTIVLC-ISADL 85 (165)
T ss_dssp CCCCTTCBCCCCEE--ECTTSCE--EEGGGG-TTSEEEEEECSCSCSSCCCHH-HHHHHHHHHHS--TTEEEEE-EESSC
T ss_pred ccCCCCCCCCCeEE--ECCCCCE--EehHHh-CCCeEEEEEECCCCCCccHHH-HHHHHHHHHHc--CCCEEEE-EeCCC
Confidence 46889999999994 5888987 999999 799999999999999999997 99999999999 7999999 99999
Q ss_pred HHHHHHHHHHhCC-CCceEEEEeC-cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 82 AFVMKAWKENLGI-NDEVLLLSDG-NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
++.+++|++++++ + |++++|+ ++.++++||+..... .. .|.+.|++||||++|+|++.+.+.+ ....+++++
T Consensus 86 ~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~~--~~-~g~~~p~~~liD~~G~i~~~~~~~~-~~~~~~~~~ 159 (165)
T 1q98_A 86 PFAQARFCGAEGIEN--AKTVSTFRNHALHSQLGVDIQTG--PL-AGLTSRAVIVLDEQNNVLHSQLVEE-IKEEPNYEA 159 (165)
T ss_dssp HHHHTTCTTTTTCTT--EEEEECTTCTHHHHHTTCEECSS--TT-TTSBCCEEEEECTTSBEEEEEECSB-TTSCCCHHH
T ss_pred HHHHHHHHHHcCCCc--eEEeeccccchHHHHhCceeccc--cc-CCccceeEEEEcCCCEEEEEEeCCC-CCCCCCHHH
Confidence 9999999999999 8 9999998 899999999975310 00 1345688999999999999998642 345678999
Q ss_pred HHhhC
Q 045485 160 MLKAL 164 (164)
Q Consensus 160 ~l~~l 164 (164)
+|++|
T Consensus 160 ~l~~l 164 (165)
T 1q98_A 160 ALAVL 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99875
No 11
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=100.00 E-value=5.6e-33 Score=199.73 Aligned_cols=144 Identities=26% Similarity=0.375 Sum_probs=125.2
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
+.+++|+++|+|++ .+.+|+. ++|+++ +||++||+||+++|||+|..+ ++.|++++++ +|+.+++ ||.|+
T Consensus 18 ~~l~~G~~aP~f~l--~~~~G~~--~~l~~~-~Gk~vvl~f~~~~~c~~C~~~-~~~l~~~~~~---~~~~vv~-is~d~ 87 (166)
T 3p7x_A 18 QQINEGDFAPDFTV--LDNDLNQ--VTLADY-AGKKKLISVVPSIDTGVCDQQ-TRKFNSDASK---EEGIVLT-ISADL 87 (166)
T ss_dssp CCCCTTSBCCCCEE--ECTTSCE--EEGGGG-TTSCEEEEECSCTTSHHHHHH-HHHHHHHSCT---TTSEEEE-EESSC
T ss_pred ccCCCCCCCCCeEE--EcCCCCE--EeHHHh-CCCcEEEEEECCCCCCccHHH-HHHHHHHhhc---CCCEEEE-EECCC
Confidence 56899999999994 6889987 999999 799999999999999999998 9999999877 7899999 99999
Q ss_pred HHHHHHHHHHhCC-CCceEEEEeC-cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 82 AFVMKAWKENLGI-NDEVLLLSDG-NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
++.+++|++++++ + |++++|+ ++.++++||+.... .+.+.|++||||++|+|++.+.+.. ....+++++
T Consensus 88 ~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~------~g~~~p~~~liD~~G~i~~~~~~~~-~~~~~~~~~ 158 (166)
T 3p7x_A 88 PFAQKRWCASAGLDN--VITLSDHRDLSFGENYGVVMEE------LRLLARAVFVLDADNKVVYKEIVSE-GTDFPDFDA 158 (166)
T ss_dssp HHHHHHHHHHHTCSS--CEEEECTTTCHHHHHHTCEETT------TTEECCEEEEECTTCBEEEEEECSB-TTSCCCHHH
T ss_pred HHHHHHHHHHcCCCc--eEEccCCchhHHHHHhCCcccc------CCceeeEEEEECCCCeEEEEEEcCC-cccCCCHHH
Confidence 9999999999999 8 9999999 99999999997531 1345688999999999999998753 344567788
Q ss_pred HHhhC
Q 045485 160 MLKAL 164 (164)
Q Consensus 160 ~l~~l 164 (164)
++++|
T Consensus 159 il~~l 163 (166)
T 3p7x_A 159 ALAAY 163 (166)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 12
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=100.00 E-value=2.1e-32 Score=198.38 Aligned_cols=149 Identities=33% Similarity=0.610 Sum_probs=122.8
Q ss_pred CCCCCCCeeeeeecC----CC-----ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCc-EEE
Q 045485 6 VGDKLPDATLSYFDS----AG-----ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVD-IVA 75 (164)
Q Consensus 6 ~G~~~P~f~l~~~~~----~g-----~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~-vi~ 75 (164)
+|+++|+|++ .+. +| +. ++|+++.+||++||+|||++|||+|+.||+|.|++++++|+++|+. +++
T Consensus 9 ~g~~aP~f~l--~~~~~~~~G~~~~~~~--v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~ 84 (171)
T 2pwj_A 9 ILSAASNVSL--QKARTWDEGVESKFST--TPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVIC 84 (171)
T ss_dssp -CCCSSSBCC--CSCEECCCSSCTTCCC--EEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEE
T ss_pred ccCcCCCeEE--ecccccccCCccCcce--EEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 4559999995 454 35 55 9999953688888999999999999996699999999999999999 999
Q ss_pred EEecCCHHHHHHHHHHhCC--CCceEEEEeCcchHHHHhCCccccCCCCCCCCc-ceeEEEEEecCCcEEEEEeecC-Cc
Q 045485 76 CISVNDAFVMKAWKENLGI--NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGV-RSRRYALLAENGVVKVLNLEEG-GA 151 (164)
Q Consensus 76 ~is~d~~~~~~~~~~~~~~--~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~-~~p~~~lid~~G~I~~~~~~~~-~~ 151 (164)
||.|+++.+++|++++++ + |++++|+++.++++||+...... .++|+ ..|++|+|| +|+|++.+++.+ +.
T Consensus 85 -Is~d~~~~~~~~~~~~~~~~~--fp~l~D~~~~~~~~ygv~~~~~~--~~~g~~~~~~t~~I~-~G~I~~~~~~~~~~~ 158 (171)
T 2pwj_A 85 -VAINDPYTVNAWAEKIQAKDA--IEFYGDFDGSFHKSLELTTDLSA--GLLGIRSERWSAYVV-DGKVKALNVEESPSD 158 (171)
T ss_dssp -EESSCHHHHHHHHHHTTCTTT--SEEEECTTCHHHHHHTCEEECTT--TTCCEEECCEEEEEE-TTEEEEEEECSSTTC
T ss_pred -EeCCCHHHHHHHHHHhCCCCc--eEEEECCccHHHHHhCCcccccc--ccCCcccceeEEEEE-CCEEEEEEeecCCCC
Confidence 999999999999999996 6 99999999999999999754211 11122 236789999 999999999853 34
Q ss_pred eeecCHHHHHhhC
Q 045485 152 FTFSGAEDMLKAL 164 (164)
Q Consensus 152 ~~~~~~~~~l~~l 164 (164)
..+.+++++|++|
T Consensus 159 ~~~~~~~~il~~l 171 (171)
T 2pwj_A 159 VKVSGAETILGQI 171 (171)
T ss_dssp CSSSSHHHHHHHC
T ss_pred CcccCHHHHHhcC
Confidence 5678999999986
No 13
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=100.00 E-value=3.1e-32 Score=197.43 Aligned_cols=151 Identities=30% Similarity=0.485 Sum_probs=125.5
Q ss_pred CCCCCCCCCCCeeeeeecCCC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCc-EEEEEe
Q 045485 2 AAISVGDKLPDATLSYFDSAG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVD-IVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~-vi~~is 78 (164)
+++++|+++|+|+++ + +| +. ++|+++.+||++||+|||+.|||.|..| ++.|++.+++|+++|+. |++ ||
T Consensus 12 ~~~~vGd~aPdf~l~--~-~g~~~~--v~L~d~~~gk~vVL~fyP~~fTp~Ct~e-~~~f~~~~~ef~~~gv~~Vig-IS 84 (171)
T 2xhf_A 12 SPIKVGDIIPDVLVY--E-DVPSKS--FPIHDVFRGRKGILFSVVGAFVPGSNNH-IPEYLSLYDKFKEEGYHTIAC-IA 84 (171)
T ss_dssp CCCCTTCBCCCCEEE--C-SSTTCE--EETHHHHTTSEEEEEECSCTTCTTTTSS-HHHHHHTHHHHHHTTCCEEEE-EE
T ss_pred CcccCcCCCCCeEEe--c-CCCCcE--EEhHHHhCCCeEEEEEECCCCCCcCHHH-HHHHHHHHHHHHHCCCCEEEE-Ee
Confidence 578999999999964 3 44 55 9999954799999999999999999997 99999999999999997 889 99
Q ss_pred cCCHHHHHHHHHHhCC--CCceEEEEeCcchHHHHhCCccccCCCCCCCC-cceeEEEEEecCCcEEEEEeecC-Cceee
Q 045485 79 VNDAFVMKAWKENLGI--NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLG-VRSRRYALLAENGVVKVLNLEEG-GAFTF 154 (164)
Q Consensus 79 ~d~~~~~~~~~~~~~~--~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~-~~~p~~~lid~~G~I~~~~~~~~-~~~~~ 154 (164)
.|+++.+++|.+++++ + |++++|++++++++||+..+.. ..+.+ ...|.+|||| +|+|++++++++ +....
T Consensus 85 ~D~~~~~~~w~~~~~~~~~--f~lLSD~~~~~a~ayGv~~~~~--~~g~g~~~~R~tfvId-dG~V~~~~v~~~~~~~~~ 159 (171)
T 2xhf_A 85 VNDPFVMAAWGKTVDPEHK--IRMLADMHGEFTRALGTELDSS--KMLGNNRSRRYAMLID-DNKIRSVSTEPDITGLAC 159 (171)
T ss_dssp SSCHHHHHHHHHHHCTTCC--SEEEECTTSHHHHHHTCBCCCH--HHHSSCCBCCEEEEEE-TTEEEEEEETTSCSHHHH
T ss_pred CCCHHHHHHHHHhcCCCCC--eEEEEeCCchHHHHhCCceecc--ccCCCcceEEEEEEEe-CCEEEEEEEeCCCCcccC
Confidence 9999999999999998 7 9999999999999999975411 00101 2558899999 999999999753 23457
Q ss_pred cCHHHHHhhC
Q 045485 155 SGAEDMLKAL 164 (164)
Q Consensus 155 ~~~~~~l~~l 164 (164)
.+++++|+++
T Consensus 160 s~a~~vL~~~ 169 (171)
T 2xhf_A 160 LLSIQRQKEN 169 (171)
T ss_dssp HHHHHHC---
T ss_pred CCHHHHHHHh
Confidence 7899998865
No 14
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=100.00 E-value=1e-32 Score=204.66 Aligned_cols=148 Identities=23% Similarity=0.277 Sum_probs=128.5
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
..+++|+++|+|+ +.+.+|+. ++|+++ +||++||+||+++|||+|..+ ++.|++++++| +|+.+++ ||.|+
T Consensus 50 ~~l~~G~~aPdf~--l~d~~G~~--v~L~d~-~Gk~vvl~F~~~~~c~~C~~e-~~~l~~l~~~~--~~v~vv~-Is~D~ 120 (200)
T 3zrd_A 50 KLPQIGDKAKDFT--LVAKDLSD--VALSSF-AGKRKVLNIFPSIDTGVCAAS-VRKFNQLAGEL--ENTVVLC-ISSDL 120 (200)
T ss_dssp CCCCTTCBCCCCE--EECTTSCE--EEGGGG-TTSEEEEEECSCCCCSCCCHH-HHHHHHHHHTS--TTEEEEE-EESSC
T ss_pred ccCCCCCCCCCeE--EECCCCCE--EcHHHh-CCCcEEEEEECCCCCchhHHH-HHHHHHHHHHh--CCCEEEE-EECCC
Confidence 4689999999999 46889987 999999 799999999999999999998 99999999999 7999999 99999
Q ss_pred HHHHHHHHHHhCC-CCceEEEEeC-cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 82 AFVMKAWKENLGI-NDEVLLLSDG-NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
++.+++|++++++ + |++++|+ ++.++++||+..... .. .|.+.|++||||++|+|++.+++.. ....+++++
T Consensus 121 ~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~~ygv~~~~~-~~--~g~~~p~~~lID~~G~I~~~~~~~~-~~~~~~~~~ 194 (200)
T 3zrd_A 121 PFAQSRFCGAEGLSN--VITLSTLRGADFKQAYGVAITEG-PL--AGLTARAVVVLDGQDNVIYSELVNE-ITTEPNYDA 194 (200)
T ss_dssp HHHHTTCTTTTTCTT--EEEEETTSCTHHHHHTTCEECSS-TT--TTSBCCEEEEECTTSBEEEEEECSB-TTSCCCHHH
T ss_pred HHHHHHHHHHcCCCC--ceEEecCchHHHHHHhCceeecc-cC--CCccccEEEEECCCCeEEEEEecCC-cccCCCHHH
Confidence 9999999999999 8 9999999 999999999975311 01 1345688999999999999998753 355778999
Q ss_pred HHhhC
Q 045485 160 MLKAL 164 (164)
Q Consensus 160 ~l~~l 164 (164)
+|++|
T Consensus 195 ~l~~L 199 (200)
T 3zrd_A 195 ALAAL 199 (200)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98864
No 15
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=100.00 E-value=3.6e-33 Score=203.46 Aligned_cols=150 Identities=18% Similarity=0.179 Sum_probs=124.7
Q ss_pred CCCCCCCC----CCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEE
Q 045485 2 AAISVGDK----LPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACI 77 (164)
Q Consensus 2 ~~l~~G~~----~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~i 77 (164)
.+|++|+. +|+|++ .+.+|+. ++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++|+.+|+ |
T Consensus 19 ~~l~~Gd~ig~~aP~f~l--~~~~G~~--v~l~d~-~Gk~vvl~f~~~~~c~~C~~e-l~~l~~l~~~~~~~~~~vv~-V 91 (179)
T 3ixr_A 19 SHMNIGDTLNHSLLNHPL--MLSGSTC--KTLSDY-TNQWLVLYFYPKDNTPGSSTE-GLEFNLLLPQFEQINATVLG-V 91 (179)
T ss_dssp CSSCTTCBCCHHHHHCCE--EEGGGEE--ECGGGG-TTSEEEEEECSCTTSHHHHHH-HHHHHHHHHHHHTTTEEEEE-E
T ss_pred cccCcCcccCCcCCCeeE--ECCCCCE--EeHHHH-CCCCEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHCCCEEEE-E
Confidence 56889999 999995 5788987 999999 799999999999999999998 99999999999999999999 9
Q ss_pred ecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCH
Q 045485 78 SVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGA 157 (164)
Q Consensus 78 s~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~ 157 (164)
+.|+++.+++|+++++++ |++++|+++.++++||+.............+.|++||||++|+|++.+.+ .....++
T Consensus 92 s~D~~~~~~~~~~~~~~~--f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~---~~~~~~~ 166 (179)
T 3ixr_A 92 SRDSVKSHDSFCAKQGFT--FPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQ---VKVPGHA 166 (179)
T ss_dssp ESCCHHHHHHHHHHHTCC--SCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECS---CCSTTHH
T ss_pred cCCCHHHHHHHHHHcCCc--eEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcC---CCCCCCH
Confidence 999999999999999999 99999999999999999754211000000135789999999999999943 2334556
Q ss_pred HHHHhh
Q 045485 158 EDMLKA 163 (164)
Q Consensus 158 ~~~l~~ 163 (164)
+++++.
T Consensus 167 ~~il~~ 172 (179)
T 3ixr_A 167 EEVLNK 172 (179)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 16
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=100.00 E-value=1.6e-32 Score=196.84 Aligned_cols=144 Identities=23% Similarity=0.326 Sum_probs=124.6
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
+.+++|+++|+|++ .+.+|+. ++|+++ +||++||+||+++|||+|+.+ ++.|++++++| +++.+++ ||.|+
T Consensus 14 ~~~~~G~~~P~f~l--~~~~G~~--v~l~~~-~gk~vvl~F~~~~~c~~C~~~-~~~l~~~~~~~--~~v~vv~-is~d~ 84 (163)
T 1psq_A 14 KQLQVGDKALDFSL--TTTDLSK--KSLADF-DGKKKVLSVVPSIDTGICSTQ-TRRFNEELAGL--DNTVVLT-VSMDL 84 (163)
T ss_dssp CCCCTTSBCCCCEE--ECTTSCE--EEGGGG-TTSEEEEEECSCTTSHHHHHH-HHHHHHHTTTC--TTEEEEE-EESSC
T ss_pred CCCCCCCCCCCEEE--EcCCCcE--eeHHHh-CCCEEEEEEECCCCCCccHHH-HHHHHHHHHHc--CCcEEEE-EECCC
Confidence 46789999999995 5888987 999999 799999999988999999997 99999999998 7999999 99999
Q ss_pred HHHHHHHHHHhCC-CCceEEEEe-CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 82 AFVMKAWKENLGI-NDEVLLLSD-GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~l~D-~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
++.+++|++++++ + |++++| +++.++++||+.... .|++.|++||||++|+|++.+.+.. ....+++++
T Consensus 85 ~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~gv~~~~------~g~~~p~~~liD~~G~i~~~~~g~~-~~~~~~~~~ 155 (163)
T 1psq_A 85 PFAQKRWCGAEGLDN--AIMLSDYFDHSFGRDYALLINE------WHLLARAVFVLDTDNTIRYVEYVDN-INSEPNFEA 155 (163)
T ss_dssp HHHHHHHHHHHTCTT--SEEEECTTTCHHHHHHTCBCTT------TCSBCCEEEEECTTCBEEEEEECSB-TTSCCCHHH
T ss_pred HHHHHHHHHhcCCCC--cEEecCCchhHHHHHhCCcccc------CCceEEEEEEEcCCCeEEEEEecCC-cCCCCCHHH
Confidence 9999999999999 8 999999 899999999997431 1345588999999999999998752 334566777
Q ss_pred HHhh
Q 045485 160 MLKA 163 (164)
Q Consensus 160 ~l~~ 163 (164)
+++.
T Consensus 156 ~l~~ 159 (163)
T 1psq_A 156 AIAA 159 (163)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 17
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.98 E-value=4.8e-32 Score=207.91 Aligned_cols=147 Identities=22% Similarity=0.331 Sum_probs=125.0
Q ss_pred CCCCCCCCCCCeeeee-ecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSY-FDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~-~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
+.+++|+++|+|+++. .+.+|+. ++|+++ +||++||+||+++|||+|..+ ++.|++++++|+++|+.||+ ||.|
T Consensus 60 ~~l~vG~~aPdF~l~~l~d~~G~~--vsLsd~-kGK~vvL~F~~a~~cp~C~~e-l~~l~~l~~~~~~~gv~vv~-IS~D 134 (254)
T 3tjj_A 60 SKAKISKPAPYWEGTAVIDGEFKE--LKLTDY-RGKYLVFFFYPLDFTFVCPTE-IIAFGDRLEEFRSINTEVVA-CSVD 134 (254)
T ss_dssp CCCCTTSBCCCCEEEEEETTEEEE--EEGGGG-TTSEEEEEECSCTTCSSCCHH-HHHHHHTHHHHHTTTEEEEE-EESS
T ss_pred cccCCCCCCCCcEeeeecCCCCcE--EeHHHH-CCCeEEEEEECCCCCCchHHH-HHHHHHHHHHHHHcCCEEEE-EcCC
Confidence 4678999999999752 3445555 999999 799999999999999999998 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCcee
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
+++.+++|++++ +++ |++++|.++.++++||+.... .|...|++||||++|+|++++.++. ..
T Consensus 135 ~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~va~~ygv~~~~------~g~~~p~tflID~~G~I~~~~~~~~--~~ 204 (254)
T 3tjj_A 135 SQFTHLAWINTPRRQGGLGPIR--IPLLSDLTHQISKDYGVYLED------SGHTLRGLFIIDDKGILRQITLNDL--PV 204 (254)
T ss_dssp CHHHHHHHHTSCGGGTSCCSCS--SCEEECTTSHHHHHHTCEETT------TTEECEEEEEECTTSBEEEEEEECT--TC
T ss_pred CHHHHHHHHHHHHHhcCCcccc--cceeeCcHHHHHHHcCCcccc------CCCccceEEEECCCCeEEEEEecCC--CC
Confidence 999999999887 678 999999999999999997541 1345688999999999999999753 23
Q ss_pred ecCHHHHHhh
Q 045485 154 FSGAEDMLKA 163 (164)
Q Consensus 154 ~~~~~~~l~~ 163 (164)
..+++++|+.
T Consensus 205 ~~~~~eil~~ 214 (254)
T 3tjj_A 205 GRSVDETLRL 214 (254)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 4466666654
No 18
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.98 E-value=3.7e-32 Score=194.41 Aligned_cols=142 Identities=23% Similarity=0.309 Sum_probs=122.5
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCc-EEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLTSNKK-AILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~-vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
.+++|+++|+|++ .+.+|+. ++++++ +||+ +||+||+++|||+|..+ ++.|++++++++++|+.+|+ |+.|+
T Consensus 1 ml~~G~~~P~f~l--~~~~G~~--~~l~~~-~gk~~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v~vv~-vs~d~ 73 (161)
T 3drn_A 1 MVKVGDKAPLFEG--IADNGEK--ISLSDY-IGKHNIVLYFYPKDDTPGSTRE-ASAFRDNWDLLKDYDVVVIG-VSSDD 73 (161)
T ss_dssp -CCTTSBCCCCEE--EETTSCE--EEGGGT-TTTSEEEEEECSCTTCHHHHHH-HHHHHHTHHHHHTTCEEEEE-EESCC
T ss_pred CCCCCCcCCCeEe--ecCCCCE--EEHHHh-cCCCCEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHcCCEEEE-EeCCC
Confidence 3789999999995 5789987 999999 7997 99999889999999997 99999999999999999999 89999
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHH
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDML 161 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l 161 (164)
++.+++|+++++++ |++++|.++.++++||+... ..+.|++||||++|+|++.+.+.. ...+++++++
T Consensus 74 ~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~--------~~~~P~~~lid~~G~i~~~~~g~~--~~~~~~~~il 141 (161)
T 3drn_A 74 INSHKRFKEKYKLP--FILVSDPDKKIRELYGAKGF--------ILPARITFVIDKKGIIRHIYNSQM--NPANHVNEAL 141 (161)
T ss_dssp HHHHHHHHHHTTCC--SEEEECTTSHHHHHTTCCCS--------SSCCCEEEEECTTSBEEEEEECSS--CTTHHHHHHH
T ss_pred HHHHHHHHHHhCCC--ceEEECCcHHHHHHcCCCCc--------CcccceEEEECCCCEEEEEEecCC--CCCcCHHHHH
Confidence 99999999999999 99999999999999999731 234477999999999999998731 2234556665
Q ss_pred hh
Q 045485 162 KA 163 (164)
Q Consensus 162 ~~ 163 (164)
+.
T Consensus 142 ~~ 143 (161)
T 3drn_A 142 KA 143 (161)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 19
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.98 E-value=2.7e-32 Score=194.96 Aligned_cols=151 Identities=17% Similarity=0.132 Sum_probs=122.8
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCH
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDA 82 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~ 82 (164)
.+++|+++|+|+.++.+.+|+. ++++++ +||++||+||+++|||+|..+ ++.|++++++|+++|+.+|+ |+.|++
T Consensus 6 ~l~~G~~~P~f~~~l~~~~G~~--~~l~~~-~gk~~vl~F~~~~~c~~C~~~-~~~l~~~~~~~~~~~~~vv~-vs~d~~ 80 (163)
T 3gkn_A 6 DAVLELPAATFDLPLSLSGGTQ--TTLRAH-AGHWLVIYFYPKDSTPGATTE-GLDFNALLPEFDKAGAKILG-VSRDSV 80 (163)
T ss_dssp CCCCCCCGGGGGCCEECSTTCE--ECSGGG-TTSCEEEEECSCTTSHHHHHH-HHHHHHHHHHHHHTTCEEEE-EESSCH
T ss_pred ccccCCcCCCccccccCCCCCE--EEHHHh-CCCcEEEEEeCCCCCCcHHHH-HHHHHHHHHHHHHCCCEEEE-EeCCCH
Confidence 3889999999992234788987 999999 799999999977999999997 99999999999999999999 999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 83 FVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+.+++|+++++++ |++++|+++.++++||+.............+.|++||||++|+|++.+.+. ....+++++++
T Consensus 81 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~---~~~~~~~~il~ 155 (163)
T 3gkn_A 81 KSHDNFCAKQGFA--FPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKV---KVAGHADAVLA 155 (163)
T ss_dssp HHHHHHHHHHCCS--SCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSC---CSTTHHHHHHH
T ss_pred HHHHHHHHHhCCC--ceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEcCC---CcccCHHHHHH
Confidence 9999999999999 999999999999999997531100000000147899999999999999432 23445566655
Q ss_pred h
Q 045485 163 A 163 (164)
Q Consensus 163 ~ 163 (164)
.
T Consensus 156 ~ 156 (163)
T 3gkn_A 156 A 156 (163)
T ss_dssp H
T ss_pred H
Confidence 4
No 20
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.98 E-value=8.9e-32 Score=202.35 Aligned_cols=145 Identities=19% Similarity=0.230 Sum_probs=123.4
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCC-----cCchhhHHHhHHHHHhCCCcEEEE
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCS-----QKHLPGFVEKSAELKSKGVDIVAC 76 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~-----~~~l~~l~~~~~~~~~~~v~vi~~ 76 (164)
..+++|+++|+|++ .+.+|+. ++|+++ +||++||+||++.|||+|. .+ ++.|+++ | +|+.||+
T Consensus 20 ~~l~vG~~APdFtL--~d~~G~~--vsLsd~-~Gk~vVL~F~ps~~cp~C~~~~~~~E-l~~~~~~---~--~gv~Vvg- 87 (224)
T 3keb_A 20 DFPRKGDYLPSFML--VDDQKHD--AALESF-SHTPKLIVTLLSVDEDEHAGLLLLRE-TRRFLDS---W--PHLKLIV- 87 (224)
T ss_dssp CCCCTTCBCCCCEE--EETTSCE--EEGGGG-TTCCEEEEECSCTTCSTTTSHHHHHH-HHHHHTT---C--TTSEEEE-
T ss_pred CcCCCCCCCCCeEE--ECCCCCE--EeHHHh-CCCcEEEEEEeCCCCCCCCCCccHHH-HHHHHHH---c--CCCEEEE-
Confidence 46889999999995 5778887 999999 7999999999888899999 87 8999888 4 7999999
Q ss_pred EecCCHHHHHHHHHHhCC-CCceEEEEeC-cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceee
Q 045485 77 ISVNDAFVMKAWKENLGI-NDEVLLLSDG-NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTF 154 (164)
Q Consensus 77 is~d~~~~~~~~~~~~~~-~~~~~~l~D~-~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~ 154 (164)
||.|+++.+++|++++++ + |++++|. ++.++++||+.... ... .|++.|++||||++|+|++.++... ....
T Consensus 88 IS~Ds~~~~~~f~~~~gl~~--fplLsD~~~~~vak~yGv~~~~--~~~-~G~~~p~tfvID~dG~I~~~~~~~~-~~~~ 161 (224)
T 3keb_A 88 ITVDSPSSLARARHEHGLPN--IALLSTLRGRDFHKRYGVLITE--YPL-SGYTSPAIILADAANVVHYSERLAN-TRDF 161 (224)
T ss_dssp EESSCHHHHHHHHHHHCCTT--CEEEESTTCTTHHHHTTCBCCS--TTS-TTCBCCEEEEECTTCBEEEEEECSB-TTCC
T ss_pred EECCCHHHHHHHHHHcCCCC--ceEEEcCCchHHHHHhCCcccc--ccc-cCCccCEEEEEcCCCEEEEEEecCC-CCCC
Confidence 999999999999999999 6 9999998 69999999997531 111 2466788999999999999999753 4456
Q ss_pred cCHHHHHhhC
Q 045485 155 SGAEDMLKAL 164 (164)
Q Consensus 155 ~~~~~~l~~l 164 (164)
++++++|++|
T Consensus 162 pd~~evl~~L 171 (224)
T 3keb_A 162 FDFDAIEKLL 171 (224)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7888887753
No 21
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.97 E-value=6.8e-32 Score=205.48 Aligned_cols=147 Identities=21% Similarity=0.332 Sum_probs=124.0
Q ss_pred CCCCCCCCCCCeeeeee-cCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYF-DSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~-~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
+.+++|+++|+|+++.. +.+|+. ++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++|+.+|+ ||.|
T Consensus 46 ~~l~vG~~aPdF~l~~~~d~~G~~--vsLsd~-~Gk~vvL~F~~~~~cp~C~~e-l~~l~~l~~~~~~~gv~vv~-Is~D 120 (240)
T 3qpm_A 46 SKAKISKPAPQWEGTAVINGEFKE--LKLSDY-RGKYLVFFFYPLDFTFVCPTE-IIAFSDRVHEFRAINTEVVA-CSVD 120 (240)
T ss_dssp CSCCTTSBCCCCEEEEEETTEEEE--EEGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHHHHHHHTTTEEEEE-EESS
T ss_pred CcCCCCCCCCCcEeeeeeCCCCcE--EEHHHh-CCCEEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCCEEEE-EECC
Confidence 45789999999997522 434445 999999 799999999988999999998 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCcee
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
+++.+++|++++ +++ |++++|+++.++++||+.... .|...|++||||++|+|++.+.++.. .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~--fp~l~D~~~~v~~~ygv~~~~------~g~~~p~~flID~~G~I~~~~~~~~~--~ 190 (240)
T 3qpm_A 121 SQFTHLAWIITPRKQGGLGPMK--IPLLSDLTHQISKDYGVYLED------QGHTLRGLFIIDEKGVLRQITMNDLP--V 190 (240)
T ss_dssp CHHHHHHHHHSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETT------TTEECEEEEEECTTSBEEEEEEECTT--B
T ss_pred CHHHHHHHHHHHHhhcCCCCCc--eeEEeCchHHHHHHhCCcccc------CCCccceEEEEcCCCeEEEEEecCCC--C
Confidence 999999999987 778 999999999999999997541 13456889999999999999987532 3
Q ss_pred ecCHHHHHhh
Q 045485 154 FSGAEDMLKA 163 (164)
Q Consensus 154 ~~~~~~~l~~ 163 (164)
..+++++|+.
T Consensus 191 ~~~~~eil~~ 200 (240)
T 3qpm_A 191 GRSVDETLRL 200 (240)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 4466666654
No 22
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.97 E-value=4.3e-32 Score=205.77 Aligned_cols=150 Identities=19% Similarity=0.347 Sum_probs=123.3
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCC-cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNK-KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
|++.+|+++|+|++ .+++| . ++|+++ +|+ ++||+||+++|||+|+.| ++.|++++++|+++|+++|+ ||.|
T Consensus 1 M~l~iG~~aPdF~l--~~~~G-~--v~l~d~-~Gk~~vvL~f~pa~~cpvC~~e-l~~l~~l~~ef~~~~v~vig-IS~D 72 (233)
T 2v2g_A 1 MGITLGEVFPNFEA--DSTIG-K--LKFHDW-LGNSWGVLFSHPRDFTPVSTTE-LGRVIQLEGDFKKRGVKLIA-LSCD 72 (233)
T ss_dssp -CCCTTCBCCCCEE--EETTC-C--EEHHHH-HCSSEEEEEECSCSSCHHHHHH-HHHHHHTHHHHHHTTEEEEE-EESS
T ss_pred CCCCCCCCCCCcEE--ecCCC-C--EEHHHH-CCCCeEEEEEECCCCCCCcHHH-HHHHHHHHHHHHHcCCEEEE-EcCC
Confidence 57899999999995 57788 5 999999 577 899999999999999997 99999999999999999999 9999
Q ss_pred CHHHHHHHHH------Hh--CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCce
Q 045485 81 DAFVMKAWKE------NL--GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAF 152 (164)
Q Consensus 81 ~~~~~~~~~~------~~--~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~ 152 (164)
+.+.+++|++ ++ +++ ||+++|+++.++++||+.........+.....|++||||++|+|++.+.++. .
T Consensus 73 ~~~~~~~~~~~i~~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~--~ 148 (233)
T 2v2g_A 73 NVADHKEWSEDVKCLSGVKGDMP--YPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA--T 148 (233)
T ss_dssp CHHHHHHHHHHHHHHHTCCSSCS--SCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT--T
T ss_pred CHHHHHHHHHHHHHhhCcccCCc--eEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC--C
Confidence 9999999998 56 788 9999999999999999974311001111234588999999999999998753 2
Q ss_pred eecCHHHHHhh
Q 045485 153 TFSGAEDMLKA 163 (164)
Q Consensus 153 ~~~~~~~~l~~ 163 (164)
...+++++|+.
T Consensus 149 ~gr~~~eilr~ 159 (233)
T 2v2g_A 149 TGRNFSEILRV 159 (233)
T ss_dssp BCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 23467777654
No 23
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.97 E-value=1.7e-31 Score=201.03 Aligned_cols=143 Identities=20% Similarity=0.259 Sum_probs=120.4
Q ss_pred CCCCCCCCCeeeeeecC--CC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 4 ISVGDKLPDATLSYFDS--AG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~--~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
+++|+++|+|++ .+. +| +. ++|+++.+||++||+||+++|||+|+.+ +|.|++++++|+++|+++|+ ||.
T Consensus 25 l~~G~~aP~F~l--~~~~~~G~~~~--v~L~d~~~Gk~vvl~F~patwCp~C~~e-~p~l~~l~~~~~~~~v~vv~-Is~ 98 (221)
T 2c0d_A 25 SLVTKKAYNFTA--QGLNKNNEIIN--VDLSSFIGQKYCCLLFYPLNYTFVCPTE-IIEFNKHIKDFENKNVELLG-ISV 98 (221)
T ss_dssp -CTTSBCCCCEE--EEECTTSCEEE--EEGGGGTTTCEEEEEECCCCTTTCCHHH-HHHHHHTHHHHHHTTEEEEE-EES
T ss_pred CCCCCCCCCeEE--eccccCCCccE--EeHHHHcCCCeEEEEEEcCCCCCchHHH-HHHHHHHHHHHHHCCCEEEE-EeC
Confidence 789999999995 466 78 65 9999994489999999999999999997 99999999999999999999 999
Q ss_pred CCHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCce
Q 045485 80 NDAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAF 152 (164)
Q Consensus 80 d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~ 152 (164)
|+++.+++|++++ +++ |++++|+++.++++||+. ... |...|++||||++|+|++.+.+...
T Consensus 99 D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~-~~~------g~~~P~~~lID~~G~I~~~~~g~~~-- 167 (221)
T 2c0d_A 99 DSVYSHLAWKNMPIEKGGIGNVE--FTLVSDINKDISKNYNVL-YDN------SFALRGLFIIDKNGCVRHQTVNDLP-- 167 (221)
T ss_dssp SCHHHHHHHHHSCGGGTCCCSCS--SEEEECTTSHHHHHTTCE-ETT------TEECEEEEEECTTSBEEEEEEECTT--
T ss_pred CCHHHHHHHHHHhhhhcCccCCc--eEEEECCchHHHHHcCCc-ccC------CCccceEEEECCCCeEEEEEecCCC--
Confidence 9999999999998 677 999999999999999996 310 3345889999999999999987431
Q ss_pred eecCHHHHHhh
Q 045485 153 TFSGAEDMLKA 163 (164)
Q Consensus 153 ~~~~~~~~l~~ 163 (164)
...+++++++.
T Consensus 168 ~~~~~~ell~~ 178 (221)
T 2c0d_A 168 IGRNVQEVLRT 178 (221)
T ss_dssp CCCCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 23455666543
No 24
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.97 E-value=1.8e-31 Score=195.58 Aligned_cols=142 Identities=21% Similarity=0.359 Sum_probs=120.1
Q ss_pred CCCCCCCCeeeeeecC-CC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 5 SVGDKLPDATLSYFDS-AG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~-~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
++|+++|+|++ .+. +| +. ++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++|+++|+ ||.|+
T Consensus 2 ~~G~~aP~f~l--~~~~~G~~~~--v~l~~~-~Gk~vvl~F~~~~~Cp~C~~e-~~~l~~~~~~~~~~~v~vv~-Is~d~ 74 (186)
T 1n8j_A 2 LINTKIKPFKN--QAFKNGEFIE--VTEKDT-EGRWSVFFFYPADFTFVSPTE-LGDVADHYEELQKLGVDVYS-VSTDT 74 (186)
T ss_dssp CTTCBCCCCEE--EEEETTEEEE--EEHHHH-TTSEEEEEECSCTTCSHHHHH-HHHHHHHHHHHHHTTEEEEE-EESSC
T ss_pred CCCCcCCCcEe--ecccCCcceE--EEHHHH-CCCeEEEEEECCCCCCccHHH-HHHHHHHHHHHHHCCCEEEE-EECCC
Confidence 68999999995 465 47 55 999999 799999999978999999997 99999999999999999999 99999
Q ss_pred HHHHHHHHHHh----CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCH
Q 045485 82 AFVMKAWKENL----GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGA 157 (164)
Q Consensus 82 ~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~ 157 (164)
++.+++|++++ +++ |++++|+++.++++||+.... .|++.|++||||++|+|++.+.+..+ ...++
T Consensus 75 ~~~~~~~~~~~~~~~~~~--fp~l~D~~~~~~~~ygv~~~~------~g~~~p~~~lID~~G~i~~~~~~~~~--~~~~~ 144 (186)
T 1n8j_A 75 HFTHKAWHSSSETIAKIK--YAMIGDPTGALTRNFDNMRED------EGLADRATFVVDPQGIIQAIEVTAEG--IGRDA 144 (186)
T ss_dssp HHHHHHHHHHCTTGGGCC--SEEEECTTSHHHHHTTCEETT------TTEECEEEEEECTTSBEEEEEEECTT--BCCCH
T ss_pred HHHHHHHHHHcCcccCCc--eeEEECCchHHHHHhCCccCC------CCceeeEEEEECCCCeEEEEEecCCC--CCCCH
Confidence 99999999999 888 999999999999999997531 13445889999999999999987431 12345
Q ss_pred HHHHhh
Q 045485 158 EDMLKA 163 (164)
Q Consensus 158 ~~~l~~ 163 (164)
+++++.
T Consensus 145 ~~l~~~ 150 (186)
T 1n8j_A 145 SDLLRK 150 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 25
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=200.61 Aligned_cols=147 Identities=22% Similarity=0.304 Sum_probs=120.5
Q ss_pred CCCCCCCCCCCeeeeee-cCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYF-DSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~-~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
..+.+|+++|+|+++.. +.+|+. ++|+++ +||++||+||+++|||+|+.+ ++.|++++++|+++|+++|+ ||.|
T Consensus 17 ~~~~~G~~aP~f~l~~~~~~~g~~--v~l~d~-~Gk~vvl~F~pat~C~~C~~e-~~~l~~l~~~~~~~~v~vv~-Is~D 91 (211)
T 2pn8_A 17 NLYFQSMPAPYWEGTAVIDGEFKE--LKLTDY-RGKYLVFFFYPLDFTFVCPTE-IIAFGDRLEEFRSINTEVVA-CSVD 91 (211)
T ss_dssp --CCSSCBCCCCEEEEEETTEEEE--EEGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHTTTEEEEE-EESS
T ss_pred ccCCCCCcCCCeEeecccCCCCcE--EEHHHh-CCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCEEEE-EECC
Confidence 45789999999996422 223455 999999 799999999999999999997 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCcee
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
+++.+++|++++ +++ |++++|+++.++++||+.... .|...|++||||++|+|++.+.+... .
T Consensus 92 ~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~~~~------~g~~~p~~~lID~~G~I~~~~~g~~~--~ 161 (211)
T 2pn8_A 92 SQFTHLAWINTPRRQGGLGPIR--IPLLSDLTHQISKDYGVYLED------SGHTLRGLFIIDDKGILRQITLNDLP--V 161 (211)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCS--SCEEECTTSHHHHHTTCEETT------TTEECEEEEEECTTSBEEEEEEECTT--B
T ss_pred CHHHHHHHHHHhhhccCccCCc--eEEEECCchHHHHHcCCcccC------CCcccceEEEECCCCEEEEEEecCCC--C
Confidence 999999999988 677 999999999999999996431 02345889999999999999987431 2
Q ss_pred ecCHHHHHhh
Q 045485 154 FSGAEDMLKA 163 (164)
Q Consensus 154 ~~~~~~~l~~ 163 (164)
..+++++++.
T Consensus 162 ~~~~~ell~~ 171 (211)
T 2pn8_A 162 GRSVDETLRL 171 (211)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 2356666543
No 26
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.97 E-value=1.9e-31 Score=195.26 Aligned_cols=154 Identities=29% Similarity=0.516 Sum_probs=124.4
Q ss_pred CCCCCCCCCeeeeeecC---------CCc--eeeeehhhhcCCCcEEEEEecCCCCcCCC-cCchhhHHHhHHHH-HhCC
Q 045485 4 ISVGDKLPDATLSYFDS---------AGE--LQTITVSDLTSNKKAILFAVPGAFTPTCS-QKHLPGFVEKSAEL-KSKG 70 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~---------~g~--~~~~~l~d~~~g~~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~-~~~~ 70 (164)
+++|+++|+|+++.... +|. ..+++|+++.+||++||+|||+.|||+|. .| ++.|++.+++| +++|
T Consensus 1 l~vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e-~~~f~~~~~~f~~~~g 79 (182)
T 1xiy_A 1 MKENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKM-IPGYEEEYDYFIKENN 79 (182)
T ss_dssp CCTTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTH-HHHHHHTHHHHHTTSC
T ss_pred CCCCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHhCC
Confidence 57899999999642102 451 12499999547999999999999999999 86 99999999999 9999
Q ss_pred Cc-EEEEEecCCHHHHHHHHHHhCC-CCceEEEEeCcchHHHHhCCccccCCCCCCCC-cceeEEEEEecCCcEEEEEee
Q 045485 71 VD-IVACISVNDAFVMKAWKENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLG-VRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 71 v~-vi~~is~d~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~-~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. |++ ||.|+++.+++|.+++++ + |++++|+++.++++||+..... ..++| ...|.+|||| +|+|+++++.
T Consensus 80 ~~~V~g-vS~D~~~~~~~~~~~~~~~~--f~lLsD~~~~~a~~yGv~~~~~--~~G~g~~~~R~tfvId-dG~V~~~~v~ 153 (182)
T 1xiy_A 80 FDDIYC-ITNNDIYVLKSWFKSMDIKK--IKYISDGNSSFTDSMNMLVDKS--NFFMGMRPWRFVAIVE-NNILVKMFQE 153 (182)
T ss_dssp CSEEEE-EESSCHHHHHHHHHHTTCCS--SEEEECTTSHHHHHTTCEEECG--GGTCCEEECCEEEEEE-TTEEEEEEEC
T ss_pred CcEEEE-EeCCCHHHHHHHHHHcCCCC--ceEEEeCchHHHHHhCCceecc--ccCCCCceEEEEEEEc-CCEEEEEEEe
Confidence 97 888 999999999999999998 6 9999999999999999975421 11222 2458899999 9999999987
Q ss_pred cCC-------ceeecCHHHHHhhC
Q 045485 148 EGG-------AFTFSGAEDMLKAL 164 (164)
Q Consensus 148 ~~~-------~~~~~~~~~~l~~l 164 (164)
++. ..+..+++++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~vL~~L 177 (182)
T 1xiy_A 154 KDKQHNIQTDPYDISTVNNVKEFL 177 (182)
T ss_dssp SSCCTTCSSCCCSTTSHHHHHHHH
T ss_pred CCcccccccCcccCCCHHHHHHHH
Confidence 531 13468999998864
No 27
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.97 E-value=6.2e-32 Score=195.00 Aligned_cols=146 Identities=22% Similarity=0.340 Sum_probs=122.8
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
+.+++|+++|+|++ .+.+|+. ++++++ +||++||+||+++|||+|+.+ ++.|++++++| +++++|+ |+.|+
T Consensus 19 ~~l~~g~~~P~f~l--~~~~G~~--~~l~~~-~gk~vvl~f~~~~~C~~C~~~-~~~l~~~~~~~--~~v~vv~-Is~d~ 89 (171)
T 2yzh_A 19 PELKVGDRAPEAVV--VTKDLQE--KIVGGA-KDVVQVIITVPSLDTPVCETE-TKKFNEIMAGM--EGVDVTV-VSMDL 89 (171)
T ss_dssp CCCCTTSBCCCEEE--EETTSCE--EEESSC-CSSEEEEEECSCTTSHHHHHH-HHHHHHHTTTC--TTEEEEE-EESSC
T ss_pred CcCCCCCcCCceEE--ECCCCCE--eeHHHh-CCCeEEEEEECCCCCCchHHH-HHHHHHHHHHc--CCceEEE-EeCCC
Confidence 45789999999994 5888987 999999 799999999989999999997 99999999998 7999999 99999
Q ss_pred HHHHHHHHHHhCC-CCceEEEEe-CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 82 AFVMKAWKENLGI-NDEVLLLSD-GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~~l~D-~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
++.+++|++++++ + |++++| +++.+ ++||+...... ..+++.|++||||++|+|++.+.+++ ....+++++
T Consensus 90 ~~~~~~~~~~~~~~~--~~~l~D~~~~~~-~~~gv~~~~~~---~~g~~~p~~~liD~~G~i~~~~~~~~-~~~~~~~~~ 162 (171)
T 2yzh_A 90 PFAQKRFCESFNIQN--VTVASDFRYRDM-EKYGVLIGEGA---LKGILARAVFIIDKEGKVAYVQLVPE-ITEEPNYDE 162 (171)
T ss_dssp HHHHHHHHHHTTCCS--SEEEECTTTCGG-GGGTCBBCSST---TTTSBCCEEEEECTTSBEEEEEECSB-TTSCCCCHH
T ss_pred HHHHHHHHHHcCCCC--eEEeecCccCcH-HHhCCEecccc---cCCceeeEEEEEcCCCeEEEEEeCCC-cCCCCCHHH
Confidence 9999999999999 8 999999 88999 99999753110 01345688999999999999998642 234556666
Q ss_pred HHhh
Q 045485 160 MLKA 163 (164)
Q Consensus 160 ~l~~ 163 (164)
+++.
T Consensus 163 ll~~ 166 (171)
T 2yzh_A 163 VVNK 166 (171)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 28
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.97 E-value=2.2e-31 Score=200.74 Aligned_cols=150 Identities=21% Similarity=0.338 Sum_probs=122.5
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCC-cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNK-KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
..+.+|+++|+|++ .+++| . ++|+++ +|+ ++||+|||++|||+|+.| ++.|++++++|+++|+++|+ ||.|
T Consensus 3 ~~l~~G~~aP~F~l--~~~~G-~--v~l~d~-~Gk~~vvL~~~~a~~cp~C~~e-l~~l~~l~~~f~~~~v~vi~-IS~D 74 (224)
T 1prx_A 3 GGLLLGDVAPNFEA--NTTVG-R--IRFHDF-LGDSWGILFSHPRDFTPVCTTE-LGRAAKLAPEFAKRNVKLIA-LSID 74 (224)
T ss_dssp --CCTTCBCCCCEE--EETTE-E--EEHHHH-HTTSEEEEEEESCSSCHHHHHH-HHHHHHHHHHHHTTTEEEEE-EESS
T ss_pred CcCCCcCCCCCcEE--ecCCC-C--EEHHHH-cCCCeEEEEEECCCCCCCcHHH-HHHHHHHHHHHHHCCCEEEE-EcCC
Confidence 45789999999995 57788 5 999999 576 899999999999999997 99999999999999999999 9999
Q ss_pred CHHHHHHHHHH----------hCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCC
Q 045485 81 DAFVMKAWKEN----------LGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGG 150 (164)
Q Consensus 81 ~~~~~~~~~~~----------~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~ 150 (164)
+.+.+++|+++ ++++ |++++|.++.++++||+.........+.....|++||||++|+|++.+.++..
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~ 152 (224)
T 1prx_A 75 SVEDHLAWSKDINAYNSEEPTEKLP--FPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPAT 152 (224)
T ss_dssp CHHHHHHHHHHHHHHTTSCCCSCCS--SCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTT
T ss_pred CHHHHHHHHHHHHHhhCcccccCcC--cceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCC
Confidence 99999999987 7888 99999999999999999753211111112345889999999999999997532
Q ss_pred ceeecCHHHHHhh
Q 045485 151 AFTFSGAEDMLKA 163 (164)
Q Consensus 151 ~~~~~~~~~~l~~ 163 (164)
...+++++++.
T Consensus 153 --~gr~~~eil~~ 163 (224)
T 1prx_A 153 --TGRNFDEILRV 163 (224)
T ss_dssp --BCCCHHHHHHH
T ss_pred --CCCCHHHHHHH
Confidence 23356766653
No 29
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.97 E-value=3.6e-31 Score=200.92 Aligned_cols=151 Identities=39% Similarity=0.665 Sum_probs=124.3
Q ss_pred CCCCCCCCCCCeeeeeecC-CCceeeeehhh-hcCCCcEEEEEecCCCCcCCC-cCchhhHHHhHHHHHhCCC-cEEEEE
Q 045485 2 AAISVGDKLPDATLSYFDS-AGELQTITVSD-LTSNKKAILFAVPGAFTPTCS-QKHLPGFVEKSAELKSKGV-DIVACI 77 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~-~g~~~~~~l~d-~~~g~~vvl~f~~~~~cp~C~-~~~l~~l~~~~~~~~~~~v-~vi~~i 77 (164)
|.+++|+++|+|+++ +. +|+..+++|++ + +||++||+|||++|||+|+ .| +|.|++++++|+++|+ .+++ |
T Consensus 1 m~~~~G~~aP~f~l~--~~~~g~~~~v~l~~~~-~gk~vvl~f~~a~~cp~C~~~e-~~~l~~~~~~~~~~~~~~vv~-i 75 (241)
T 1nm3_A 1 MSSMEGKKVPQVTFR--TRQGDKWVDVTTSELF-DNKTVIVFSLPGAFTPTCSSSH-LPRYNELAPVFKKYGVDDILV-V 75 (241)
T ss_dssp --CCTTSBCCCCEEE--EEETTEEEEEEHHHHH-TTSEEEEEEESCSSCHHHHHTH-HHHHHHHHHHHHHTTCCEEEE-E
T ss_pred CCccCCCCCCCeEEE--cccCCCceeecHHHHh-CCCeEEEEEeCCCCCCCCCHHH-HHHHHHHHHHHHHCCCCEEEE-E
Confidence 578999999999964 53 67622399999 8 7999999999999999999 97 9999999999999999 9999 9
Q ss_pred ecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCc---ceeEEEEEecCCcEEEEEeecCCc---
Q 045485 78 SVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGV---RSRRYALLAENGVVKVLNLEEGGA--- 151 (164)
Q Consensus 78 s~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~---~~p~~~lid~~G~I~~~~~~~~~~--- 151 (164)
|.|+++.+++|+++++++ .|++++|+++.++++||+..... .. |+ +.|++||| ++|+|++.+.+....
T Consensus 76 s~d~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~gv~~~~~--~~--g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~ 149 (241)
T 1nm3_A 76 SVNDTFVMNAWKEDEKSE-NISFIPDGNGEFTEGMGMLVGKE--DL--GFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDP 149 (241)
T ss_dssp ESSCHHHHHHHHHHTTCT-TSEEEECTTSHHHHHTTCEEECT--TT--TCCEEECCEEEEE-ETTEEEEEEECCSCSSCC
T ss_pred EcCCHHHHHHHHHhcCCC-ceEEEECCCcHHHHHhCceeecc--cc--cCcccceeEEEEE-ECCEEEEEEEeccCCCcc
Confidence 999999999999999984 49999999999999999975421 11 22 34779999 999999999975321
Q ss_pred eeecCHHHHHhh
Q 045485 152 FTFSGAEDMLKA 163 (164)
Q Consensus 152 ~~~~~~~~~l~~ 163 (164)
....+++++|+.
T Consensus 150 ~~~~~~~~il~~ 161 (241)
T 1nm3_A 150 FKVSDADTMLKY 161 (241)
T ss_dssp CSSSSHHHHHHH
T ss_pred ceecCHHHHHHH
Confidence 222688888875
No 30
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.97 E-value=1.3e-31 Score=201.56 Aligned_cols=150 Identities=19% Similarity=0.278 Sum_probs=122.2
Q ss_pred CCCCCCCCCCCeeeeeecC--CCceeeeehhhhcCCC-cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe
Q 045485 2 AAISVGDKLPDATLSYFDS--AGELQTITVSDLTSNK-KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~--~g~~~~~~l~d~~~g~-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is 78 (164)
|.+++|+++|+|++ .+. +| . ++|+++ +|+ ++||+|||++|||+|+.| ++.|++++++|+++|+++|+ ||
T Consensus 1 m~l~iG~~aP~F~l--~~~~~~G-~--v~l~d~-~Gk~~vvL~f~~a~~cp~C~~e-l~~l~~l~~~f~~~~v~vi~-vS 72 (220)
T 1xcc_A 1 MGYHLGATFPNFTA--KASGIDG-D--FELYKY-IENSWAILFSHPNDFTPVCTTE-LAELGKMHEDFLKLNCKLIG-FS 72 (220)
T ss_dssp -CCCTTCBCCCCEE--CBTTCSS-C--EEHHHH-TTTSEEEEECCSCTTCHHHHHH-HHHHHHTHHHHHTTTEEEEE-EE
T ss_pred CCCCCCCCCCCcEe--ecccCCC-c--EeHHHH-cCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHcCCEEEE-Ee
Confidence 56899999999995 577 78 5 999999 687 899999999999999997 99999999999999999999 99
Q ss_pred cCCHHHHHHHHH-------HhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCc
Q 045485 79 VNDAFVMKAWKE-------NLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGA 151 (164)
Q Consensus 79 ~d~~~~~~~~~~-------~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~ 151 (164)
.|+.+.+++|.+ +++++ ||+++|+++.++++||+.........+.+...|++||||++|+|++.+.++.+
T Consensus 73 ~D~~~~~~~~~~~i~~~~~~~~~~--fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~- 149 (220)
T 1xcc_A 73 CNSKESHDKWIEDIKYYGKLNKWE--IPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPAT- 149 (220)
T ss_dssp SSCHHHHHHHHHHHHHHHTCSCCC--CCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTT-
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCc--ceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCC-
Confidence 999999999987 46778 99999999999999999743110001112345889999999999999987532
Q ss_pred eeecCHHHHHhh
Q 045485 152 FTFSGAEDMLKA 163 (164)
Q Consensus 152 ~~~~~~~~~l~~ 163 (164)
...+++++++.
T Consensus 150 -~g~~~~ell~~ 160 (220)
T 1xcc_A 150 -TGRNAHEILRV 160 (220)
T ss_dssp -BCCCHHHHHHH
T ss_pred -CCCCHHHHHHH
Confidence 23466666553
No 31
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.97 E-value=5.5e-31 Score=187.83 Aligned_cols=130 Identities=22% Similarity=0.402 Sum_probs=114.1
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCC--cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNK--KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~--~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
+.+++|+++|+|++ .+.+|+. ++|+++ +|+ ++||+||+++|||+|..+ +|.|++++++|+++| .+|+ |+.
T Consensus 5 ~~~~~G~~~P~f~l--~~~~G~~--v~l~~~-~gk~~~vvl~f~~~~~c~~C~~~-~~~l~~~~~~~~~~~-~vv~-is~ 76 (159)
T 2a4v_A 5 NELEIGDPIPDLSL--LNEDNDS--ISLKKI-TENNRVVVFFVYPRASTPGSTRQ-ASGFRDNYQELKEYA-AVFG-LSA 76 (159)
T ss_dssp TCCCTTCBCCSCEE--ECTTSCE--EEHHHH-HHHCSEEEEEECSSSSSHHHHHH-HHHHHHHHHHHTTTC-EEEE-EES
T ss_pred CcCCCCCCCCCeEE--ECCCCCE--EeHHHH-hCCCCeEEEEEcCCCCCCCHHHH-HHHHHHHHHHHHhCC-cEEE-EeC
Confidence 46889999999994 6888987 999999 576 788888889999999997 999999999999889 9999 899
Q ss_pred CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 80 NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
|+++.+++|+++++++ |++++|+++.++++||+..... . + ..|++||| ++|+|++.+.+.
T Consensus 77 d~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~p~---~--g-~~~~~~li-~~G~i~~~~~g~ 136 (159)
T 2a4v_A 77 DSVTSQKKFQSKQNLP--YHLLSDPKREFIGLLGAKKTPL---S--G-SIRSHFIF-VDGKLKFKRVKI 136 (159)
T ss_dssp CCHHHHHHHHHHHTCS--SEEEECTTCHHHHHHTCBSSSS---S--C-BCCEEEEE-ETTEEEEEEESC
T ss_pred CCHHHHHHHHHHhCCC--ceEEECCccHHHHHhCCccccc---C--C-ccceEEEE-cCCEEEEEEccC
Confidence 9999999999999999 9999999999999999975310 1 1 23679999 999999999863
No 32
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.97 E-value=1.2e-30 Score=196.18 Aligned_cols=147 Identities=19% Similarity=0.321 Sum_probs=122.2
Q ss_pred CCCCCCCCCCCeeeeee-cCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYF-DSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~-~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
+.+++|+++|+|+++.. +.+|+. ++|+++ +||++||+||+++||++|..+ +|.|++++++|+++|+.+|+ |+.|
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~--v~l~~~-~Gk~vll~F~a~~wC~~C~~~-~p~l~~l~~~~~~~~v~vv~-Is~D 112 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKE--ICLKDY-RGKYVVLFFYPADFTFVCPTE-IIAFSDQVEEFNSRNCQVIA-CSTD 112 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEE--EEGGGG-TTSEEEEEECSCSSCSHHHHH-HHHHHHTHHHHHTTTEEEEE-EESS
T ss_pred ccccCCCCCCCeEEecccCCCCcE--EeHHHh-CCCeEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCCEEEE-EECC
Confidence 46899999999996432 434465 999999 799999999977999999997 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCcee
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
+++...+|++++ +++ |++++|.++.+++.||+.... .|+..|++||||++|+|++.+.+... .
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~ygv~~~~------~g~~~P~~~lID~~G~I~~~~~g~~~--~ 182 (222)
T 3ztl_A 113 SQYSHLAWDNLDRKSGGLGHMK--IPLLADRKQEISKAYGVFDEE------DGNAFRGLFIIDPNGILRQITINDKP--V 182 (222)
T ss_dssp CHHHHHHHHHSCGGGTSCCSCS--SCEEECSSSHHHHHTTCBCTT------TSSBCEEEEEECTTSEEEEEEEECTT--B
T ss_pred CHHHHHHHHHHhhhhccccccc--eeEEeCCchHHHHHcCCeecC------CCCccceEEEECCCCeEEEEEecCCC--C
Confidence 999999999987 788 999999999999999997531 13455889999999999999997542 2
Q ss_pred ecCHHHHHhh
Q 045485 154 FSGAEDMLKA 163 (164)
Q Consensus 154 ~~~~~~~l~~ 163 (164)
...++++|+.
T Consensus 183 ~~~~~~il~~ 192 (222)
T 3ztl_A 183 GRSVDETLRL 192 (222)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 3456776654
No 33
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.97 E-value=1.2e-30 Score=185.76 Aligned_cols=143 Identities=24% Similarity=0.362 Sum_probs=123.2
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCC-cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCH
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNK-KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDA 82 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~ 82 (164)
+.+|+++|+|+ +.+.+|+. ++++++ +|+ ++||+||+++|||+|..+ ++.|++++++++++++.+++ |+.|++
T Consensus 9 ~~~G~~~p~f~--l~~~~G~~--~~l~~~-~gk~~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~~~vv~-is~d~~ 81 (160)
T 1xvw_A 9 LNVGATAPDFT--LRDQNQQL--VTLRGY-RGAKNVLLVFFPLAFTGICQGE-LDQLRDHLPEFENDDSAALA-ISVGPP 81 (160)
T ss_dssp CCTTSBCCCCE--EECTTSCE--EEGGGG-TTTCEEEEEECSCTTSSHHHHH-HHHHHHTGGGTSSSSEEEEE-EESCCH
T ss_pred CCCCCCCCCeE--eEcCCCCE--EeHHHh-cCCCCEEEEEECCCCCCchHHH-HHHHHHHHHHHHHCCcEEEE-EeCCCH
Confidence 88999999999 46888987 999999 788 899999889999999997 99999999999888999999 999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeC--cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHH
Q 045485 83 FVMKAWKENLGINDEVLLLSDG--NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDM 160 (164)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~--~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~ 160 (164)
+.+++|+++++++ |+++.|. ++.+++.||+.... .++|.|++||||++|+|++.+.+.. ...++++++
T Consensus 82 ~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~~~~------~~~p~~~~~lid~~G~i~~~~~g~~--~~~~~~~~l 151 (160)
T 1xvw_A 82 PTHKIWATQSGFT--FPLLSDFWPHGAVSQAYGVFNEQ------AGIANRGTFVVDRSGIIRFAEMKQP--GEVRDQRLW 151 (160)
T ss_dssp HHHHHHHHHHTCC--SCEEECTTTTTHHHHHTTCEETT------TTEECSEEEEECTTSBEEEEEECCT--TCCCCHHHH
T ss_pred HHHHHHHHhcCCC--ceEEecCCcChHHHHHcCCcccc------CCCeeeeEEEECCCCeEEEEEecCC--CCCCCHHHH
Confidence 9999999999999 9999995 89999999997431 1466568999999999999998742 234466666
Q ss_pred Hhh
Q 045485 161 LKA 163 (164)
Q Consensus 161 l~~ 163 (164)
++.
T Consensus 152 ~~~ 154 (160)
T 1xvw_A 152 TDA 154 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 34
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.97 E-value=1.6e-30 Score=194.55 Aligned_cols=145 Identities=21% Similarity=0.347 Sum_probs=122.1
Q ss_pred CCCCCCCCCCCeeeeeecC--CC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEE
Q 045485 2 AAISVGDKLPDATLSYFDS--AG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACI 77 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~--~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~i 77 (164)
..+.+|+++|+|++ .+. +| +. ++|+++.+||++||+||+++|||+|..+ ++.|++++++|+++++++|+ |
T Consensus 19 ~~l~~G~~aP~f~l--~~~~~~G~~~~--v~l~d~~~gk~vvl~F~pa~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~-I 92 (213)
T 2i81_A 19 SPTYVGKEAPFFKA--EAVFGDNSFGE--VNLTQFIGKKYVLLYFYPLDFTFVCPSE-IIALDKALDAFHERNVELLG-C 92 (213)
T ss_dssp -CCCBTSBCCCCEE--EEECTTSCEEE--EEGGGGTTTCEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHHTTEEEEE-E
T ss_pred ccccCCCcCCCeEe--eccccCCceeE--EeHHHHcCCCeEEEEEEcCCCCCCCHHH-HHHHHHHHHHHHHCCCEEEE-E
Confidence 46789999999995 466 78 55 9999994489999999989999999998 99999999999999999999 9
Q ss_pred ecCCHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCC
Q 045485 78 SVNDAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGG 150 (164)
Q Consensus 78 s~d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~ 150 (164)
+.|+++.+++|++++ +++ |++++|+++.++++||+... . |+..|++||||++|+|++.+.+...
T Consensus 93 s~D~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~~~~~ygv~~~--~-----g~~~p~~~lID~~G~i~~~~~~~~~ 163 (213)
T 2i81_A 93 SVDSKYTHLAWKKTPLAKGGIGNIK--HTLLSDITKSISKDYNVLFD--D-----SVSLRAFVLIDMNGIVQHLLVNNLA 163 (213)
T ss_dssp ESSCHHHHHHHHSSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEET--T-----TEECEEEEEECTTSBEEEEEEECTT
T ss_pred eCCCHHHHHHHHHHHHhhCCccCCC--ceEEECCchHHHHHhCCccc--c-----CCcccEEEEECCCCEEEEEEecCCC
Confidence 999999999999988 778 99999999999999999741 1 3456889999999999999987431
Q ss_pred ceeecCHHHHHhh
Q 045485 151 AFTFSGAEDMLKA 163 (164)
Q Consensus 151 ~~~~~~~~~~l~~ 163 (164)
...+++++++.
T Consensus 164 --~~~~~~ell~~ 174 (213)
T 2i81_A 164 --IGRSVDEILRI 174 (213)
T ss_dssp --CCCCHHHHHHH
T ss_pred --CCCCHHHHHHH
Confidence 12355555543
No 35
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.97 E-value=3.1e-30 Score=190.99 Aligned_cols=146 Identities=18% Similarity=0.323 Sum_probs=121.8
Q ss_pred CCCCCCCCCCCeeeeeecC--CCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 2 AAISVGDKLPDATLSYFDS--AGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~--~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
+.+++|+++|+|+++ +. +|+..+++|+++ +||++||+||+++|||+|..+ ++.|++++++|+++|+.+|+ |+.
T Consensus 4 ~~~~~G~~aP~f~l~--~~~~~g~~~~v~l~~~-~gk~vvl~F~~~~~C~~C~~~-~~~l~~l~~~~~~~~v~vi~-Is~ 78 (202)
T 1uul_A 4 GEAEDLHPAPDFNET--ALMPNGTFKKVALTSY-KGKWLVLFFYPMDFTFVCPTE-ICQFSDRVKEFSDIGCEVLA-CSM 78 (202)
T ss_dssp CCCCTTSBCCCCEEE--EECTTSCEEEEEGGGG-TTSEEEEEECSCTTCSHHHHH-HHHHHHTHHHHHTTTEEEEE-EES
T ss_pred ccccCCCcCCCcEee--eeecCCCccEEEHHHh-CCCeEEEEEECCCCCCcCHHH-HHHHHHHHHHHHHCCCEEEE-EeC
Confidence 468899999999964 44 672223999999 799999999989999999998 99999999999999999999 999
Q ss_pred CCHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCce
Q 045485 80 NDAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAF 152 (164)
Q Consensus 80 d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~ 152 (164)
|+++.+++|++++ +++ |++++|.++.++++||+..... ++..|++||||++|+|++.+.+...
T Consensus 79 D~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~ygv~~~~~------g~~~P~~~lid~~G~i~~~~~g~~~-- 148 (202)
T 1uul_A 79 DSEYSHLAWTSIERKRGGLGQMN--IPILADKTKCIMKSYGVLKEED------GVAYRGLFIIDPKQNLRQITVNDLP-- 148 (202)
T ss_dssp SCHHHHHHHHHSCGGGTCCCSCS--SCEEECTTCHHHHHHTCEETTT------TEECEEEEEECTTSBEEEEEEECTT--
T ss_pred CCHHHHHHHHHHHHhhCCCCCCc--eeEEECCchHHHHHcCCccCCC------CceeeEEEEECCCCEEEEEEeCCCC--
Confidence 9999999999988 778 9999999999999999974311 3355889999999999999987531
Q ss_pred eecCHHHHHh
Q 045485 153 TFSGAEDMLK 162 (164)
Q Consensus 153 ~~~~~~~~l~ 162 (164)
...+++++++
T Consensus 149 ~~~~~~ell~ 158 (202)
T 1uul_A 149 VGRDVDEALR 158 (202)
T ss_dssp BCCCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 2235555554
No 36
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.97 E-value=5.5e-30 Score=192.42 Aligned_cols=146 Identities=26% Similarity=0.387 Sum_probs=120.8
Q ss_pred CCCCCCCCCCCeeeee-ecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSY-FDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~-~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
..+.+|+++|+|+++. .+.+|+. ++|+++ +||++||+||+++|||+|..+ ++.|++++++|+++|+.+|+ |+.|
T Consensus 25 ~~l~~G~~aP~f~l~~~~~~~g~~--v~l~d~-~Gk~vll~F~pa~~Cp~C~~~-~~~l~~l~~~~~~~~v~vv~-Is~D 99 (220)
T 1zye_A 25 PAPAVTQHAPYFKGTAVVSGEFKE--ISLDDF-KGKYLVLFFYPLDFTFVCPTE-IIAFSDKASEFHDVNCEVVA-VSVD 99 (220)
T ss_dssp --CCTTSBCCCCEEEEECSSSEEE--EEGGGG-TTSEEEEEECSCTTCSSSHHH-HHHHHHHHHHHHHTTEEEEE-EESS
T ss_pred CcccCCCCCCCcEEEeeeCCCCcE--EEHHHh-CCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCEEEE-EECC
Confidence 4578999999999752 2445665 999999 799999999989999999997 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCcee
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFT 153 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~ 153 (164)
+++.+++|++++ +++ |++++|.+..++++||+..... +...|++||||++|+|++.+.++.+ .
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~--fp~l~D~~~~i~~~ygv~~~~~------g~~~P~~~liD~~G~I~~~~~g~~~--~ 169 (220)
T 1zye_A 100 SHFSHLAWINTPRKNGGLGHMN--IALLSDLTKQISRDYGVLLEGP------GLALRGLFIIDPNGVIKHLSVNDLP--V 169 (220)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTT--C
T ss_pred CHHHHHHHHHHHHHhCCCcCCc--eEEEECCcHHHHHHhCCeecCC------CcccceEEEECCCCEEEEEEecCCC--C
Confidence 999999999887 777 9999999999999999974311 3445889999999999999987532 2
Q ss_pred ecCHHHHHh
Q 045485 154 FSGAEDMLK 162 (164)
Q Consensus 154 ~~~~~~~l~ 162 (164)
..+.+++++
T Consensus 170 ~~~~~ell~ 178 (220)
T 1zye_A 170 GRSVEETLR 178 (220)
T ss_dssp CCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 234555544
No 37
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.97 E-value=9.8e-30 Score=185.88 Aligned_cols=130 Identities=23% Similarity=0.421 Sum_probs=115.4
Q ss_pred CCCCCCCCCeeeeeecCCCc----eeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 4 ISVGDKLPDATLSYFDSAGE----LQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~----~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
+++|+++|+|++ .+.+|+ . ++|+++ +||++||+||+++|||+|..+ ++.|++++++|+++++.+++ |+.
T Consensus 1 ~~~G~~~P~f~l--~~~~g~~~~~~--~~l~~~-~gk~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v~vv~-vs~ 73 (187)
T 1we0_A 1 SLIGTEVQPFRA--QAFQSGKDFFE--VTEADL-KGKWSIVVFYPADFSFVCPTE-LEDVQKEYAELKKLGVEVYS-VST 73 (187)
T ss_dssp CCTTCBCCCCEE--EEECSSSCCEE--EETTTT-SSSEEEEEECSCTTCSSCTHH-HHHHHHHHHHHHHTTEEEEE-EES
T ss_pred CCCCCcCCCeEE--eccCCCccceE--ecHHHH-CCCCEEEEEECCCCCcchHHH-HHHHHHHHHHHHHcCCEEEE-EEC
Confidence 578999999995 466777 6 999999 799999999989999999997 99999999999999999999 999
Q ss_pred CCHHHHHHHHHHh----CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 80 NDAFVMKAWKENL----GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 80 d~~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
|+++.+++|++++ +++ |++++|.+..+++.||+..... +...|++||||++|+|++.+.+.
T Consensus 74 d~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~~~------g~~~P~~~lid~~G~i~~~~~g~ 138 (187)
T 1we0_A 74 DTHFVHKAWHENSPAVGSIE--YIMIGDPSQTISRQFDVLNEET------GLADRGTFIIDPDGVIQAIEINA 138 (187)
T ss_dssp SCHHHHHHHHHSCHHHHTCC--SEEEECTTCHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEEC
T ss_pred CCHHHHHHHHHHhccccCCC--ceEEECCchHHHHHhCCCcCCC------CceeeEEEEECCCCeEEEEEecC
Confidence 9999999999998 888 9999999999999999974311 23447899999999999999875
No 38
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.97 E-value=6.2e-30 Score=188.59 Aligned_cols=145 Identities=20% Similarity=0.376 Sum_probs=122.4
Q ss_pred CCCCCCCCCCCeeeeeecC-CC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe
Q 045485 2 AAISVGDKLPDATLSYFDS-AG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~-~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is 78 (164)
..+++|+++|+|++ .+. +| +. ++|+++ +||++||+||+++|||+|..+ ++.|++++++|+++++.+|+ |+
T Consensus 3 ~~l~~G~~aP~f~l--~~~~~g~~~~--v~l~~~-~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~-Is 75 (197)
T 1qmv_A 3 GNARIGKPAPDFKA--TAVVDGAFKE--VKLSDY-KGKYVVLFFYPLDFTFVAPTE-IIAFSNRAEDFRKLGCEVLG-VS 75 (197)
T ss_dssp TTBCTTSBCCCCEE--EEEETTEEEE--EEGGGG-TTSEEEEEECSCTTSSHHHHH-HHHHHHTHHHHHTTTEEEEE-EE
T ss_pred CcccCCCCCCCeEe--EeecCCCccE--EEHHHH-CCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCEEEE-EE
Confidence 56889999999995 454 67 55 999999 799999999989999999997 99999999999999999999 99
Q ss_pred cCCHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCc
Q 045485 79 VNDAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGA 151 (164)
Q Consensus 79 ~d~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~ 151 (164)
.|+.+.+.+|++++ +++ |++++|.++.++++||+..... ++..|++||||++|+|++.+.+..+
T Consensus 76 ~d~~~~~~~~~~~~~~~~~~~~~~--~p~l~D~~~~~~~~~gv~~~~~------~~~~P~~~lid~~G~i~~~~~g~~~- 146 (197)
T 1qmv_A 76 VDSQFTHLAWINTPRKEGGLGPLN--IPLLADVTRRLSEDYGVLKTDE------GIAYRGLFIIDGKGVLRQITVNDLP- 146 (197)
T ss_dssp SSCHHHHHHHHTSCGGGTCCCSCS--SCEEECTTCHHHHHTTCEETTT------TEECEEEEEECTTSBEEEEEEECTT-
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCc--eEEEECCcHHHHHHcCCccCCC------CceeeEEEEECCCCcEEEEEeCCCC-
Confidence 99999999999987 778 9999999999999999975311 2345889999999999999987532
Q ss_pred eeecCHHHHHhh
Q 045485 152 FTFSGAEDMLKA 163 (164)
Q Consensus 152 ~~~~~~~~~l~~ 163 (164)
...+++++++.
T Consensus 147 -~~~~~~e~l~~ 157 (197)
T 1qmv_A 147 -VGRSVDEALRL 157 (197)
T ss_dssp -BCCCHHHHHHH
T ss_pred -CCCCHHHHHHH
Confidence 13456666543
No 39
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.97 E-value=1e-29 Score=186.68 Aligned_cols=129 Identities=22% Similarity=0.381 Sum_probs=113.8
Q ss_pred CCCCCCCCeeeeeecC--CC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 5 SVGDKLPDATLSYFDS--AG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~--~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
++|+++|+|++ .+. +| +. ++|+++.+||++||+||+++|||+|..+ ++.|++++++|+++|+.+|+ |+.|
T Consensus 1 ~~G~~aP~f~l--~~~~~~G~~~~--~~l~~~~~gk~vvl~F~~a~~C~~C~~~-~~~l~~~~~~~~~~~v~vv~-Is~d 74 (192)
T 2h01_A 1 AFQGQAPSFKA--EAVFGDNTFGE--VSLSDFIGKKYVLLYFYPLDFTFVCPSE-IIALDKALDSFKERNVELLG-CSVD 74 (192)
T ss_dssp CCSSBCCCCEE--EEECTTSCEEE--EEGGGGTTTCEEEEEECSCSSCSSCCHH-HHHHHHTHHHHHHTTEEEEE-EESS
T ss_pred CCCCcCCCcEe--EeeecCCceeE--EeHHHHcCCCeEEEEEECCCCCCCCHHH-HHHHHHHHHHHHHCCCEEEE-EEeC
Confidence 47999999995 466 78 65 9999994489999999989999999997 99999999999999999999 9999
Q ss_pred CHHHHHHHHHHh-------CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 81 DAFVMKAWKENL-------GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 81 ~~~~~~~~~~~~-------~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
+++.+++|++++ +++ |++++|.++.++++||+... . |+..|++||||++|+|++.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~--~-----g~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 75 SKFTHLAWKKTPLSQGGIGNIK--HTLISDISKSIARSYDVLFN--E-----SVALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp CHHHHHHHHTSCGGGTCCCSCS--SEEEECTTSHHHHHTTCEET--T-----TEECCEEEEECTTSBEEEEEEGG
T ss_pred CHHHHHHHHHhHHhhCCccCCC--cCeEECCcHHHHHHhCCcCc--C-----CceeeEEEEEcCCCEEEEEEeCC
Confidence 999999999988 777 99999999999999999741 1 23457899999999999999874
No 40
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.96 E-value=2.8e-29 Score=184.82 Aligned_cols=143 Identities=21% Similarity=0.411 Sum_probs=120.2
Q ss_pred CCCCCCCCCCCeeeeeecCC-------------C--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHH
Q 045485 2 AAISVGDKLPDATLSYFDSA-------------G--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL 66 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~-------------g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 66 (164)
+.+++|+++|+|+++ +.+ | +. ++|+++ +||++||+||+++|||+|..+ ++.|+++++++
T Consensus 2 ~~l~~G~~~P~f~l~--~~~~~~~~~~~~~~~~G~~~~--v~l~~~-~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~~ 75 (195)
T 2bmx_A 2 PLLTIGDQFPAYQLT--ALIGGDLSKVDAKQPGDYFTT--ITSDEH-PGKWRVVFFWPKDFTFVCPTE-IAAFSKLNDEF 75 (195)
T ss_dssp CBCCTTCBCCCCEEE--EECSSCGGGSCCSSGGGGEEE--EETTSS-TTCEEEEEECSCTTSCCCHHH-HHHHHHTHHHH
T ss_pred CcCCCCCcCCCcCcc--cccccccccccccccCCCccE--eeHHHh-CCCcEEEEEEcCCCCCCcHHH-HHHHHHHHHHH
Confidence 358999999999964 555 5 45 999999 799999999989999999997 99999999999
Q ss_pred HhCCCcEEEEEecCCHHHHHHHHHHh----CCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEE
Q 045485 67 KSKGVDIVACISVNDAFVMKAWKENL----GINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVK 142 (164)
Q Consensus 67 ~~~~v~vi~~is~d~~~~~~~~~~~~----~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~ 142 (164)
+++++.+|+ |+.|+++.+++|++++ +++ |++++|+++.+++.||+... . +...|++||||++|+|+
T Consensus 76 ~~~~v~vv~-Vs~d~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~--~-----g~~~P~~~lid~~G~i~ 145 (195)
T 2bmx_A 76 EDRDAQILG-VSIDSEFAHFQWRAQHNDLKTLP--FPMLSDIKRELSQAAGVLNA--D-----GVADRVTFIVDPNNEIQ 145 (195)
T ss_dssp HTTTEEEEE-EESSCHHHHHHHHHHCTTGGGCC--SCEEECTTSHHHHHHTCBCT--T-----SSBCEEEEEECTTSBEE
T ss_pred HHCCCEEEE-EECCCHHHHHHHHHHhccccCCc--eeEEeCCchHHHHHhCCccc--C-----CCccceEEEEcCCCeEE
Confidence 988999999 9999999999999998 888 99999999999999999743 1 23447799999999999
Q ss_pred EEEeecCCceeecCHHHHHh
Q 045485 143 VLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~ 162 (164)
+.+.+... ...+.+++++
T Consensus 146 ~~~~g~~~--~~~~~~~l~~ 163 (195)
T 2bmx_A 146 FVSATAGS--VGRNVDEVLR 163 (195)
T ss_dssp EEEEECTT--CCCCHHHHHH
T ss_pred EEEecCCC--CCCCHHHHHH
Confidence 99987531 1224555544
No 41
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.96 E-value=3.1e-29 Score=181.80 Aligned_cols=146 Identities=22% Similarity=0.281 Sum_probs=118.1
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCC-CcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAF-TPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~-cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
+.+.+|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++| ||+|..+ +|.|++++++ .++.+|+ |+.|
T Consensus 16 ~~l~~G~~~P~f~--l~~~~G~~--v~l~~~-~gk~vvl~F~-~t~~C~~C~~~-~~~l~~l~~~---~~v~vv~-Is~D 84 (175)
T 1xvq_A 16 ELPAVGSPAPAFT--LTGGDLGV--ISSDQF-RGKSVLLNIF-PSVDTPVCATS-VRTFDERAAA---SGATVLC-VSKD 84 (175)
T ss_dssp CCCCTTSBCCCCE--EECTTSCE--EEGGGG-TTSCEEEEEC-SCCCSSCCCHH-HHHHHHHHHH---TTCEEEE-EESS
T ss_pred CCCCcCCcCCCeE--EECCCCCE--EeHHHc-CCCEEEEEEE-eCCCCchHHHH-HHHHHHHHhh---cCCEEEE-EECC
Confidence 4678999999999 46888987 999999 7999999998 566 9999997 9999999887 7899999 9999
Q ss_pred CHHHHHHHHHHhCC-CCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 81 DAFVMKAWKENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
+++.+++|++++++ + |++++|+++.++++||+...... ..+.+.|++||||++|+|++.+.+.+ ....+++++
T Consensus 85 ~~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~gv~~~~~~---~~g~~~p~~~lid~~G~I~~~~~g~~-~~~~~~~~~ 158 (175)
T 1xvq_A 85 LPFAQKRFCGAEGTEN--VMPASAFRDSFGEDYGVTIADGP---MAGLLARAIVVIGADGNVAYTELVPE-IAQEPNYEA 158 (175)
T ss_dssp CHHHHTTCC------C--EEEEECTTSSHHHHTTCBBCSST---TTTSBCSEEEEECTTSBEEEEEECSB-TTCCCCHHH
T ss_pred CHHHHHHHHHHcCCCC--ceEeeCCHHHHHHHhCCcccccc---cCCcccceEEEECCCCeEEEEEECCC-cCCCCCHHH
Confidence 99999999999999 7 99999999999999999754211 11345688999999999999998532 334668888
Q ss_pred HHhhC
Q 045485 160 MLKAL 164 (164)
Q Consensus 160 ~l~~l 164 (164)
+|+++
T Consensus 159 ~l~~l 163 (175)
T 1xvq_A 159 ALAAL 163 (175)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 42
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.96 E-value=5.1e-29 Score=183.71 Aligned_cols=130 Identities=19% Similarity=0.327 Sum_probs=114.6
Q ss_pred CCCCCCCCCeeeeeecC--CCc---eeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe
Q 045485 4 ISVGDKLPDATLSYFDS--AGE---LQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS 78 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~--~g~---~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is 78 (164)
+++|+++|+|++ .+. +|+ . ++|+++.+||++||+||+++|||+|+.+ +|.|++++++|+++++.+++ |+
T Consensus 1 ~~~G~~~P~f~l--~~~~~~G~~~~~--v~l~~~~~gk~vvl~F~~a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~-Is 74 (198)
T 1zof_A 1 MVVTKLAPDFKA--PAVLGNNEVDEH--FELSKNLGKNGVILFFWPKDFTFVCPTE-IIAFDKRVKDFHEKGFNVIG-VS 74 (198)
T ss_dssp CCTTSBCCCCEE--EEECTTSCEEEE--EETTTSCCSSEEEEEECSCTTCSSCCTH-HHHHHHTHHHHHHTTEEEEE-EE
T ss_pred CCCCCcCCceEe--ecccCCCcccce--EEHHHHhCCCcEEEEEECCCCCCchHHH-HHHHHHHHHHHHHcCCEEEE-EE
Confidence 578999999995 466 786 6 9999984489999999889999999997 99999999999999999999 99
Q ss_pred cCCHHHHHHHHHH-------hCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 79 VNDAFVMKAWKEN-------LGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 79 ~d~~~~~~~~~~~-------~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
.|+++.+++|+++ ++++ |++++|.++.++++||+... + |...|++||||++|+|++.+.+.
T Consensus 75 ~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~~--~-----g~~~P~~~lid~~G~i~~~~~g~ 142 (198)
T 1zof_A 75 IDSEQVHFAWKNTPVEKGGIGQVS--FPMVADITKSISRDYDVLFE--E-----AIALRGAFLIDKNMKVRHAVIND 142 (198)
T ss_dssp SSCHHHHHHHHTSCGGGTCCCCCS--SCEEECTTSHHHHHTTCEET--T-----TEECEEEEEEETTTEEEEEEEES
T ss_pred CCCHHHHHHHHHhhhhcccccCce--eEEEECCchHHHHHhCCccc--C-----CcccceEEEECCCCEEEEEEecC
Confidence 9999999999998 7888 99999999999999999742 1 23447899999999999999874
No 43
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.4e-29 Score=187.68 Aligned_cols=140 Identities=16% Similarity=0.209 Sum_probs=118.0
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCc-EEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKK-AILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV- 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~-vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~- 79 (164)
..+++|+++|+|++ .+.+|+. ++|+++ +|++ +||+|| ++|||+|..+ ++.|++++++|+++|+.+|+ |+.
T Consensus 30 ~~l~~G~~aP~f~l--~~~~G~~--v~l~~~-~gk~~vll~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~-Vs~d 101 (218)
T 3u5r_E 30 NSITLGTRAADFVL--PDAGGNL--FTLAEF-KDSPALLVAFI-SNRCPFVVLI-REALAKFAGDYAGQGLAVVA-INSN 101 (218)
T ss_dssp CCCCTTCBCCCCCE--ECTTCCE--ECGGGG-TTCSEEEEEEC-CSSCHHHHTT-HHHHHHHHHHHTTTTEEEEE-EECS
T ss_pred CcCCCCCcCCCcEe--ECCCCCE--EeHHHh-CCCCeEEEEEE-CCCCccHHHH-HHHHHHHHHHHHhCCcEEEE-EECC
Confidence 46899999999994 6889987 999999 7996 666666 8999999998 99999999999999999999 887
Q ss_pred -------CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecC---
Q 045485 80 -------NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG--- 149 (164)
Q Consensus 80 -------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~--- 149 (164)
|+++.+++|+++++++ |+++.|.++.+++.||+.. + |++||||++|+|++....+.
T Consensus 102 ~~~~~~~d~~~~~~~~~~~~~~~--~~~l~D~~~~~~~~~~v~~----------~--P~~~liD~~G~i~~~g~~d~~~~ 167 (218)
T 3u5r_E 102 DAQAFPEETLERVGAEVKAYGYG--FPYLKDASQSVAKAYGAAC----------T--PDFFLYDRERRLVYHGQFDDARP 167 (218)
T ss_dssp CTTTCGGGSHHHHHHHHHHHTCC--SCEEECTTCHHHHHHTCCE----------E--SEEEEECTTCBEEEEECSSSCCT
T ss_pred cccccccCCHHHHHHHHHHhCCC--ccEEECCccHHHHHcCCCC----------C--CeEEEECCCCcEEEecccccccc
Confidence 7899999999999999 9999999999999999973 3 66999999999998765322
Q ss_pred ---CceeecCHHHHHhh
Q 045485 150 ---GAFTFSGAEDMLKA 163 (164)
Q Consensus 150 ---~~~~~~~~~~~l~~ 163 (164)
+..+.++++++|++
T Consensus 168 ~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 168 GNGKDVTGADLRAAVDA 184 (218)
T ss_dssp TSCCCCCCHHHHHHHHH
T ss_pred ccccccCHHHHHHHHHH
Confidence 12334455555553
No 44
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.96 E-value=1.2e-29 Score=200.62 Aligned_cols=131 Identities=23% Similarity=0.270 Sum_probs=114.5
Q ss_pred CCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHH
Q 045485 9 KLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAW 88 (164)
Q Consensus 9 ~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~ 88 (164)
++|+|+ +.+.+|+. ++|+|+ +||++||+|||+.|||+|+.| ++.|++. ..++++|+| ||.|+++.+++|
T Consensus 3 k~p~F~--l~~~~G~~--~~Lsd~-~Gk~vvl~F~p~~~tp~C~~e-~~~~~~~----~~~~~~v~g-is~D~~~~~~~f 71 (322)
T 4eo3_A 3 RVKHFE--LLTDEGKT--FTHVDL-YGKYTILFFFPKAGTSGSTRE-AVEFSRE----NFEKAQVVG-ISRDSVEALKRF 71 (322)
T ss_dssp BCCCCE--EEETTSCE--EEGGGT-TTSEEEEEECSSTTSHHHHHH-HHHHHHS----CCTTEEEEE-EESCCHHHHHHH
T ss_pred CCCCcE--EECCCcCE--EeHHHh-CCCeEEEEEECCCCCCCCHHH-HHHHHHH----hhCCCEEEE-EeCCCHHHHHHH
Confidence 689999 56889998 999999 799999999999999999998 9988753 236899999 999999999999
Q ss_pred HHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 89 KENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 89 ~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
.++++++ ||+++|+++.++++||+... +...|++||||++|+|+++|.+- ....+++++|+.
T Consensus 72 ~~~~~l~--fp~l~D~~~~v~~~ygv~~~--------~~~~r~tfiId~~G~i~~~~~~v---~~~~h~~~~l~~ 133 (322)
T 4eo3_A 72 KEKNDLK--VTLLSDPEGILHEFFNVLEN--------GKTVRSTFLIDRWGFVRKEWRRV---KVEGHVQEVKEA 133 (322)
T ss_dssp HHHHTCC--SEEEECTTCHHHHHTTCEET--------TEECCEEEEECTTSBEEEEEESC---CSTTHHHHHHHH
T ss_pred HHhhCCc--eEEEEcCchHHHHhcCCCCC--------CcCccEEEEECCCCEEEEEEeCC---CccccHHHHHHH
Confidence 9999999 99999999999999999743 44558899999999999999852 235578888875
No 45
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.96 E-value=1.6e-29 Score=181.31 Aligned_cols=143 Identities=28% Similarity=0.391 Sum_probs=120.6
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCC-CcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAF-TPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~-cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
+.+++|+++|+|++ .+.+|+. ++++++ +||++||+|| ++| ||+|+.+ ++.|+++++++ .++.+++ |+.|
T Consensus 16 ~~~~~G~~~p~f~l--~~~~G~~--~~l~~~-~gk~~vl~F~-~~~~C~~C~~~-~~~l~~l~~~~--~~~~vv~-is~d 85 (167)
T 2jsy_A 16 QEVKVGDQAPDFTV--LTNSLEE--KSLADM-KGKVTIISVI-PSIDTGVCDAQ-TRRFNEEAAKL--GDVNVYT-ISAD 85 (167)
T ss_dssp CCCCTTSCCCCCEE--EBTTCCE--EEHHHH-TTSCEEEEEC-SCSTTSHHHHT-HHHHHHHHHHH--SSCEEEE-EECS
T ss_pred CccCCCCcCCceEE--ECCCCCE--eeHHHh-CCCeEEEEEe-cCCCCCchHHH-HHHHHHHHHHc--CCCEEEE-EECC
Confidence 46889999999994 5889987 999999 7999999998 677 9999997 99999999999 8999999 9999
Q ss_pred CHHHHHHHHHHhCC-CCceEEEEe-CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHH
Q 045485 81 DAFVMKAWKENLGI-NDEVLLLSD-GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAE 158 (164)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~~l~D-~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~ 158 (164)
+++.+++|++++++ + |++++| .++.+++.||+.... .|++.|++||||++|+|++.+.+.. ....++++
T Consensus 86 ~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~v~~~~------~g~~~p~~~lid~~G~i~~~~~g~~-~~~~~~~~ 156 (167)
T 2jsy_A 86 LPFAQARWCGANGIDK--VETLSDHRDMSFGEAFGVYIKE------LRLLARSVFVLDENGKVVYAEYVSE-ATNHPNYE 156 (167)
T ss_dssp SGGGTSCCGGGSSCTT--EEEEEGGGTCHHHHHTTCBBTT------TCSBCCEEEEECTTSCEEEEEECSB-TTSCCCSH
T ss_pred CHHHHHHHHHhcCCCC--ceEeeCCchhHHHHHhCCcccc------CCceeeEEEEEcCCCcEEEEEecCC-cCCCCCHH
Confidence 99999999999999 7 999999 889999999997531 1344578999999999999998642 22344556
Q ss_pred HHHhh
Q 045485 159 DMLKA 163 (164)
Q Consensus 159 ~~l~~ 163 (164)
++++.
T Consensus 157 ~l~~~ 161 (167)
T 2jsy_A 157 KPIEA 161 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 46
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.96 E-value=5e-29 Score=190.46 Aligned_cols=145 Identities=21% Similarity=0.430 Sum_probs=120.6
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeeh-hhhc-CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITV-SDLT-SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l-~d~~-~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
.+.+|+++|+|++ .+.+| . ++| +++. +||++||+|||++|||+|..+ ++.|++++++|+++|+.+|+ ||.|
T Consensus 4 ~~~iG~~aPdF~l--~~~~G-~--v~l~~d~l~~GK~vVL~~fpa~~CpvC~tE-l~~l~~l~~ef~~~gv~VI~-VS~D 76 (249)
T 3a2v_A 4 IPLIGERFPEMEV--TTDHG-V--IKLPDHYVSQGKWFVLFSHPADFTPVCTTE-FVSFARRYEDFQRLGVDLIG-LSVD 76 (249)
T ss_dssp ECCTTSBCCCEEE--EETTE-E--EEETHHHHTTTCEEEEECCSCTTCHHHHHH-HHHHHHTHHHHHHTTEEEEE-EESS
T ss_pred cCCCCCCCCCeEE--EcCCC-C--EecHHHHhhCCCEEEEEEEcCCCCcChHHH-HHHHHHHHHHHHhCCcEEEE-EECC
Confidence 4689999999995 56677 4 999 9994 589999999999999999998 99999999999999999999 9999
Q ss_pred CHHHHHHHHHH------hCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceee
Q 045485 81 DAFVMKAWKEN------LGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTF 154 (164)
Q Consensus 81 ~~~~~~~~~~~------~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~ 154 (164)
+.+.+.+|.+. ++++ ||+++|.++.+++.||+..... + ....|++||||++|+|++.+.++.+ ..
T Consensus 77 s~~~~~~w~~~~~~~~~~~i~--fPil~D~~~~ia~~ygv~~~~~----g-~~~~p~~fIID~dG~I~~~~~~~~~--~g 147 (249)
T 3a2v_A 77 SVFSHIKWKEWIERHIGVRIP--FPIIADPQGTVARRLGLLHAES----A-THTVRGVFIVDARGVIRTMLYYPME--LG 147 (249)
T ss_dssp CHHHHHHHHHHHHHHTCCCCC--SCEEECTTSHHHHHHTCCCTTC----S-SSCCEEEEEECTTSBEEEEEEECTT--BC
T ss_pred CHHHHHHHHHHHHHhcCCCCc--eeEEECCchHHHHHhCCccccC----C-CcccceEEEECCCCeEEEEEecCCc--cc
Confidence 99999999875 4677 9999999999999999975311 1 1145889999999999999998642 23
Q ss_pred cCHHHHHhh
Q 045485 155 SGAEDMLKA 163 (164)
Q Consensus 155 ~~~~~~l~~ 163 (164)
.+++++++.
T Consensus 148 r~~~Ellr~ 156 (249)
T 3a2v_A 148 RLVDEILRI 156 (249)
T ss_dssp CCHHHHHHH
T ss_pred chhHHHHHH
Confidence 356666543
No 47
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.95 E-value=5.1e-28 Score=170.21 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=116.9
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
|++++|+++|+|++ .+ +|+. ++++++ +||++||+|| ++|||.|..+ ++.|+++++++.++|+.+++ |+.|
T Consensus 1 m~l~~G~~~P~f~l--~~-~g~~--~~l~~~-~gk~vll~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~~~v~-v~~d~ 71 (152)
T 3gl3_A 1 MSLDKGDKAPDFAL--PG-KTGV--VKLSDK-TGSVVYLDFW-ASWCGPCRQS-FPWMNQMQAKYKAKGFQVVA-VNLDA 71 (152)
T ss_dssp -CCCTTSBCCCCEE--EB-SSSE--EEGGGG-TTSEEEEEEE-CTTCTHHHHH-HHHHHHHHHHHGGGTEEEEE-EECCS
T ss_pred CCCCCCCcCCceEe--eC-CCCe--EeHHHh-CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHhhcCCeEEEE-EECCC
Confidence 57899999999995 57 7877 999999 7998888888 9999999997 99999999999999999999 7777
Q ss_pred CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHH
Q 045485 81 DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDM 160 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~ 160 (164)
+.+.+++|+++++++ |+++.|.++.+++.||+. ++ |++||||++|+|++.+.+.. ....+.+++.
T Consensus 72 ~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~~-~~~~~~l~~~ 136 (152)
T 3gl3_A 72 KTGDAMKFLAQVPAE--FTVAFDPKGQTPRLYGVK----------GM--PTSFLIDRNGKVLLQHVGFR-PADKEALEQQ 136 (152)
T ss_dssp SHHHHHHHHHHSCCC--SEEEECTTCHHHHHTTCC----------SS--SEEEEECTTSBEEEEEESCC-TTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCC--CceeECCcchhHHHcCCC----------CC--CeEEEECCCCCEEEEEccCC-CcCHHHHHHH
Confidence 678899999999999 999999999999999997 34 56999999999999998643 1223445555
Q ss_pred Hh
Q 045485 161 LK 162 (164)
Q Consensus 161 l~ 162 (164)
|+
T Consensus 137 i~ 138 (152)
T 3gl3_A 137 IL 138 (152)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 48
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.95 E-value=6.7e-28 Score=173.28 Aligned_cols=136 Identities=12% Similarity=0.132 Sum_probs=112.5
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCc-CCCcCchhhHHHhHHHHHhCC--CcEEEEEe
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTP-TCSQKHLPGFVEKSAELKSKG--VDIVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp-~C~~~~l~~l~~~~~~~~~~~--v~vi~~is 78 (164)
..+++|+++|+|+ +.+.+|+. ++|+++ +||++||+|| ++||| +|..+ ++.|+++++++++++ +.+|+ |+
T Consensus 5 ~~l~~g~~~p~f~--l~~~~G~~--~~l~~~-~gk~vll~f~-~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~vv~-is 76 (174)
T 1xzo_A 5 IKDPLNYEVEPFT--FQNQDGKN--VSLESL-KGEVWLADFI-FTNCETICPPM-TAHMTDLQKKLKAENIDVRIIS-FS 76 (174)
T ss_dssp CCSCCCEECCCCE--EECTTSCE--EETGGG-TTCCEEEEEE-CSCCSSCCCSH-HHHHHHHHHHHHHTTCCCEEEE-EE
T ss_pred CcCccccccCCcE--EEcCCCCE--Eehhhc-CCCEEEEEEE-cCCCcchhHHH-HHHHHHHHHHhhhcCCcEEEEE-EE
Confidence 5689999999999 46889987 999999 7999999998 89999 99997 999999999999887 99999 88
Q ss_pred cC----CHHHHHHHHHHhCCCCce---EEEEeCcchHHHHhCCc-----cccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 79 VN----DAFVMKAWKENLGINDEV---LLLSDGNGVFTKAIGCE-----LDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 79 ~d----~~~~~~~~~~~~~~~~~~---~~l~D~~~~~~~~~gv~-----~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
.| +++.+++|+++++++ | +++.|++..+.+.|++. .....+..+ ..+.|++||||++|+|++.+.
T Consensus 77 ~d~~~d~~~~~~~~~~~~~~~--~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~lid~~G~i~~~~~ 153 (174)
T 1xzo_A 77 VDPENDKPKQLKKFAANYPLS--FDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQ-VIHQSSFYLVGPDGKVLKDYN 153 (174)
T ss_dssp SCTTTCCHHHHHHHHTTSCCC--GGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCS-CCSCCEEEEECTTSEEEEEEE
T ss_pred eCCCCCCHHHHHHHHHHcCCC--CcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCe-eeeeeEEEEECCCCeEEEEEc
Confidence 76 789999999999998 7 99999988888777641 110000011 234577999999999999998
Q ss_pred ec
Q 045485 147 EE 148 (164)
Q Consensus 147 ~~ 148 (164)
+.
T Consensus 154 g~ 155 (174)
T 1xzo_A 154 GV 155 (174)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 49
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=8.2e-28 Score=169.75 Aligned_cols=123 Identities=17% Similarity=0.135 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
|.+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|..+ ++.++++++++.++++.+++ |+.|
T Consensus 1 m~l~~g~~~p~f~--l~~~~G~~--~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~vv~-v~~d~ 72 (152)
T 2lrn_A 1 MSLATGSVAPAIT--GIDLKGNS--VSLNDF-KGKYVLVDFW-FAGCSWCRKE-TPYLLKTYNAFKDKGFTIYG-VSTDR 72 (152)
T ss_dssp CCSCTTEECCCCE--EECSSSCE--EESGGG-TTSEEEEEEE-CTTCTTHHHH-HHHHHHHHHHHTTTTEEEEE-EECCS
T ss_pred CCccCCCcCCCce--eEcCCCCE--EeHHHc-CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHhccCCeEEEE-EEccC
Confidence 6789999999999 46888987 999999 7998888888 9999999997 99999999999988999999 7776
Q ss_pred CHHHHHHHHHHhCCCCceEEEEeC---cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 81 DAFVMKAWKENLGINDEVLLLSDG---NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
+.+.+++|+++++++ |+++.|+ +..+++.||+. ++ |++||||++|+|++.+.
T Consensus 73 ~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~ 127 (152)
T 2lrn_A 73 REEDWKKAIEEDKSY--WNQVLLQKDDVKDVLESYCIV----------GF--PHIILVDPEGKIVAKEL 127 (152)
T ss_dssp CHHHHHHHHHHHTCC--SEEEEECHHHHHHHHHHTTCC----------SS--CEEEEECTTSEEEEECC
T ss_pred CHHHHHHHHHHhCCC--CeEEecccchhHHHHHHhCCC----------cC--CeEEEECCCCeEEEeeC
Confidence 678899999999999 9999999 78999999997 34 56999999999999875
No 50
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.95 E-value=5.7e-28 Score=168.33 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=112.0
Q ss_pred CCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHH---hHHHHHhCCCcEEEEEecC-
Q 045485 5 SVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVE---KSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~---~~~~~~~~~v~vi~~is~d- 80 (164)
++|+++|+|++ .+.+|+. ++++++ +||++||+|| ++|||+|..+ +|.+.+ ++++++++++.+++ |+.|
T Consensus 2 ~~G~~~p~f~l--~~~~g~~--~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~~~~l~~~~~~~~~~~v~-v~~d~ 73 (142)
T 3ewl_A 2 NAGMKAADFTY--VTVHGDN--SRMSRL-KAQYTMLFFY-DPDCSNCRKF-EKLFAEIPAFVEMVENGTLRVLA-IYPDE 73 (142)
T ss_dssp CTTSBCCCCEE--ECTTCCE--EEGGGC-CCSEEEEEEC-CSSCHHHHHH-HHHHHTCHHHHHHHHHTSEEEEE-EECSS
T ss_pred CCCCcCCCCEE--ECCCCCE--EEhhhc-CCCEEEEEEE-CCCCccHHHH-HHHHHHhHHHHHHhccCCeEEEE-EEecC
Confidence 58999999994 5889987 999999 7998888888 9999999997 999999 89999999999999 7777
Q ss_pred CHHHHHHHHHHhCCCCceEEEEeCcchHHH--HhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHH
Q 045485 81 DAFVMKAWKENLGINDEVLLLSDGNGVFTK--AIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAE 158 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~--~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~ 158 (164)
+++.+++|+++++++ |+++.|.++.+.. .||+. ++ |++||||++|+|++.. .+.++++
T Consensus 74 ~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~------~~~~~l~ 133 (142)
T 3ewl_A 74 NREEWATKAVYMPQG--WIVGWNKAGDIRTRQLYDIR----------AT--PTIYLLDGRKRVILKD------TSMEQLI 133 (142)
T ss_dssp CHHHHHHHHTTSCTT--CEEEECTTCHHHHTTCSCCC----------SS--SEEEEECTTCBEEECS------CCHHHHH
T ss_pred CHHHHHHHHHHcCCC--cceeeCCccchhhHHHcCCC----------CC--CeEEEECCCCCEEecC------CCHHHHH
Confidence 788899999999999 9999999998877 89986 34 5699999999998732 3345556
Q ss_pred HHHhh
Q 045485 159 DMLKA 163 (164)
Q Consensus 159 ~~l~~ 163 (164)
+.|+.
T Consensus 134 ~~l~~ 138 (142)
T 3ewl_A 134 DYLAT 138 (142)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 66654
No 51
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.95 E-value=8.1e-29 Score=173.29 Aligned_cols=134 Identities=12% Similarity=0.180 Sum_probs=110.4
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
..+++|+++|+|+ + +.+|+. ++|+++ +||++||+|| ++||++|..+ +|.|++++++++++++.+|+ |+.|
T Consensus 5 ~~l~~G~~~P~f~--l-~~~g~~--~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~~vv~-vs~d~ 75 (143)
T 4fo5_A 5 EGVNPGDLAPRIE--F-LGNDAK--ASFHNQ-LGRYTLLNFW-AAYDAESRAR-NVQLANEVNKFGPDKIAMCS-ISMDE 75 (143)
T ss_dssp BSSSTTSBCCCCC--C------C--CCSCCS-SCCEEEEEEE-CTTCHHHHHH-HHHHHHHHTTSCTTTEEEEE-EECCS
T ss_pred cccCCcccCCceE--E-cCCCCE--EEHHHh-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHhCcCCEEEEE-EEccC
Confidence 4689999999999 4 568887 999999 7998888888 9999999997 99999999999988999999 8888
Q ss_pred CHHHHHHHHHHhCCCCce-EEEEeCc---chHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecC
Q 045485 81 DAFVMKAWKENLGINDEV-LLLSDGN---GVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSG 156 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~-~~l~D~~---~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~ 156 (164)
+.+.+++|+++++++ | ++++|.+ ..+++.||+.. + |++||||++|+|++.+.+ .++
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~v~~----------~--P~~~lid~~G~i~~~~~~------~~~ 135 (143)
T 4fo5_A 76 KESIFTETVKIDKLD--LSTQFHEGLGKESELYKKYDLRK----------G--FKNFLINDEGVIIAANVT------PEK 135 (143)
T ss_dssp CHHHHHHHHHHHTCC--GGGEEECTTGGGSHHHHHTTGGG----------C--CCEEEECTTSBEEEESCC------HHH
T ss_pred CHHHHHHHHHHhCCC--CceeeecccccchHHHHHcCCCC----------C--CcEEEECCCCEEEEccCC------HHH
Confidence 678899999999999 8 8889984 68999999973 3 569999999999987653 345
Q ss_pred HHHHHhhC
Q 045485 157 AEDMLKAL 164 (164)
Q Consensus 157 ~~~~l~~l 164 (164)
+++.|+.|
T Consensus 136 l~~~l~~i 143 (143)
T 4fo5_A 136 LTEILKAI 143 (143)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHhC
Confidence 66666653
No 52
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=7.5e-28 Score=169.60 Aligned_cols=123 Identities=21% Similarity=0.194 Sum_probs=110.4
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehh--hhcCCCcEEEEEecCCCCcC--CCcCchhhHHHhHHHH-HhCCCcEEEE
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVS--DLTSNKKAILFAVPGAFTPT--CSQKHLPGFVEKSAEL-KSKGVDIVAC 76 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~--d~~~g~~vvl~f~~~~~cp~--C~~~~l~~l~~~~~~~-~~~~v~vi~~ 76 (164)
..+++|+++|+|++ .+.+|+. ++|+ ++ +||++||+|| ++|||+ |..+ +|.|+++++++ +++++.+++
T Consensus 3 ~~l~~G~~~p~f~l--~~~~g~~--~~l~~~~~-~gk~vll~F~-a~~C~~v~C~~~-~~~l~~l~~~~~~~~~~~~v~- 74 (150)
T 3fw2_A 3 AKSEIGKYAPFFSL--PNAKGEK--ITRSSDAF-KQKSLLINFW-ASWNDSISQKQS-NSELREIYKKYKKNKYIGMLG- 74 (150)
T ss_dssp CTTSTTSBCCCCCE--EBTTCCE--ECTTSTTT-TTSEEEEEEE-CTTCCCHHHHHH-HHHHHHHHHHHTTCSSEEEEE-
T ss_pred ccccCCCcCCccEe--ECCCCCE--Eecchhhh-CCCEEEEEEE-eCCCCchHHHHH-HHHHHHHHHHhccCCCeEEEE-
Confidence 46899999999994 6889987 9999 99 7998888888 899999 9997 99999999999 888999999
Q ss_pred EecC-CHHHHHHHHHHhCCCCceEEEEeC---cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 77 ISVN-DAFVMKAWKENLGINDEVLLLSDG---NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 77 is~d-~~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
|+.| +++.+++|+++++++ |+++.|. +..+++.||+. ++ |++||||++|+|++.+.
T Consensus 75 v~~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 75 ISLDVDKQQWKDAIKRDTLD--WEQVCDFGGLNSEVAKQYSIY----------KI--PANILLSSDGKILAKNL 134 (150)
T ss_dssp EECCSCHHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCC----------SS--SEEEEECTTSBEEEESC
T ss_pred EEcCCCHHHHHHHHHHhCCC--ceEEEcCcccchHHHHHcCCC----------cc--CeEEEECCCCEEEEccC
Confidence 7877 568999999999999 9999998 67999999997 33 66999999999999886
No 53
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=1.6e-27 Score=168.02 Aligned_cols=138 Identities=18% Similarity=0.322 Sum_probs=118.9
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC--
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND-- 81 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~-- 81 (164)
+++|+++|+|+ +.+.+|+. ++++++ +|+++||+|| ++|||.|..+ ++.++++++++.+.++.+++ |+.|.
T Consensus 2 ~~~G~~~p~~~--l~~~~g~~--~~l~~~-~gk~vll~f~-~~~C~~C~~~-~~~l~~~~~~~~~~~~~~v~-v~~d~~~ 73 (154)
T 3kcm_A 2 SLEENPAPDFT--LNTLNGEV--VKLSDL-KGQVVIVNFW-ATWCPPCREE-IPSMMRLNAAMAGKPFRMLC-VSIDEGG 73 (154)
T ss_dssp -CTTSBCCCCE--EECTTSCE--EEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTSSEEEEE-EECCTTH
T ss_pred CCCCCCCCCeE--EEcCCCCE--Eehhhc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhccCCeEEEE-EEcCCcc
Confidence 57899999999 46888987 999999 7998888888 9999999997 99999999999988999999 88876
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHH
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDML 161 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l 161 (164)
++.+++|+++++++ |+++.|.+..+++.||+. ++ |++||||++|+|++.+.+.. ....+++.+.|
T Consensus 74 ~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~~-~~~~~~l~~~l 138 (154)
T 3kcm_A 74 KVAVEEFFRKTGFT--LPVLLDADKRVGKLYGTT----------GV--PETFVIDRHGVILKKVVGAM-EWDHPEVIAFL 138 (154)
T ss_dssp HHHHHHHHHHHCCC--CCEEECTTCHHHHHHTCC----------SB--CEEEEECTTSBEEEEEESCC-CTTSHHHHHHH
T ss_pred hHHHHHHHHHcCCC--eeEEecCchHHHHHhCCC----------CC--CeEEEECCCCcEEEEEcCCC-ccccHHHHHHH
Confidence 88899999999999 999999999999999997 34 56999999999999998753 23455666666
Q ss_pred hhC
Q 045485 162 KAL 164 (164)
Q Consensus 162 ~~l 164 (164)
+.|
T Consensus 139 ~~l 141 (154)
T 3kcm_A 139 NNE 141 (154)
T ss_dssp HTC
T ss_pred HHH
Confidence 653
No 54
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.95 E-value=2.1e-27 Score=165.87 Aligned_cols=125 Identities=19% Similarity=0.254 Sum_probs=111.8
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
.++.+|+++|+|++ .+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.++++++++.++++.+++ |+.|
T Consensus 3 ~~~~~G~~~p~~~l--~~~~g~~--~~l~~~-~gk~vll~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~~~v~-v~~d~ 74 (148)
T 3hcz_A 3 APLLLGKKAPNLYM--TDTTGTY--RYLYDV-QAKYTILFFW-DSQCGHCQQE-TPKLYDWWLKNRAKGIQVYA-ANIER 74 (148)
T ss_dssp CCCCTTSBCCCCCC--BCTTSCB--CCGGGC-CCSEEEEEEE-CGGGCTTCSH-HHHHHHHHHHHGGGTEEEEE-EECCS
T ss_pred CccCCCCcCCceEE--ecCCCCE--EEhHHc-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHhccCCEEEEE-EEecC
Confidence 57899999999994 5788987 999999 7998888888 9999999997 99999999999988999999 7777
Q ss_pred CHHHHHHHHHHhCCCCceEEEEeCcch--HHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 81 DAFVMKAWKENLGINDEVLLLSDGNGV--FTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~--~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+++.+++|+++++++ .|+++.|+++. +++.|++. ++ |+++|||++|+|++.+.+
T Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~i~----------~~--P~~~lid~~G~i~~~~~g 130 (148)
T 3hcz_A 75 KDEEWLKFIRSKKIG-GWLNVRDSKNHTDFKITYDIY----------AT--PVLYVLDKNKVIIAKRIG 130 (148)
T ss_dssp SSHHHHHHHHHHTCT-TSEEEECTTCCCCHHHHHCCC----------SS--CEEEEECTTCBEEEESCC
T ss_pred CHHHHHHHHHHcCCC-CceEEeccccchhHHHhcCcC----------CC--CEEEEECCCCcEEEecCC
Confidence 678999999999986 69999999988 99999997 34 569999999999988764
No 55
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.95 E-value=2.2e-27 Score=173.89 Aligned_cols=124 Identities=17% Similarity=0.222 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCeeeeee-cCCCceeeeehhhhcCCCc-EEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 2 AAISVGDKLPDATLSYF-DSAGELQTITVSDLTSNKK-AILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~-~~~g~~~~~~l~d~~~g~~-vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
..+++|+++|+|+ +. +.+|+. ++|+++ +|++ +||+|| ++|||+|..+ ++.|+++++++.++++.+++ |+.
T Consensus 16 ~~~~~g~~~p~f~--l~~~~~G~~--~~l~~~-~gk~~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~v~vv~-v~~ 87 (196)
T 2ywi_A 16 NMFPLGKQAPPFA--LTNVIDGNV--VRLEDV-KSDAATVIMFI-CNHCPFVKHV-QHELVRLANDYMPKGVSFVA-INS 87 (196)
T ss_dssp CCCCTTCBCCCCE--EEETTTCCE--EEHHHH-CCSSEEEEEEC-CSSCHHHHHH-HHHHHHHHHHHGGGTCEEEE-EEC
T ss_pred cCCCcCCcCCcee--eeecCCCCE--EeHHHh-CCCCeEEEEEe-CCCCccHHHH-HHHHHHHHHHHHhCCcEEEE-EEC
Confidence 3578999999999 56 788987 999999 7886 777776 9999999997 99999999999988999999 887
Q ss_pred --------CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 80 --------NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 80 --------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|+++.+++|+++++++ |+++.|.++.+++.|++.. + |++||||++|+|++.+..
T Consensus 88 d~~~~~~~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~----------~--P~~~lid~~G~i~~~~~~ 149 (196)
T 2ywi_A 88 NDAEQYPEDSPENMKKVAEELGYP--FPYLYDETQEVAKAYDAAC----------T--PDFYIFDRDLKCVYRGQL 149 (196)
T ss_dssp SCTTTCGGGSHHHHHHHHHHHTCC--SCEEECSSCHHHHHHTCCE----------E--SEEEEEETTCBEEEEECS
T ss_pred CccccccccCHHHHHHHHHHcCCC--ceEEECCchHHHHHhCCCC----------C--CeEEEEcCCCeEEEcccc
Confidence 6899999999999999 9999999999999999863 3 669999999999998753
No 56
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.95 E-value=1.4e-27 Score=169.12 Aligned_cols=135 Identities=17% Similarity=0.228 Sum_probs=112.0
Q ss_pred CCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCc-hhhHHHhHHHHHhCCCcEEEEEe-----
Q 045485 5 SVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKH-LPGFVEKSAELKSKGVDIVACIS----- 78 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~-l~~l~~~~~~~~~~~v~vi~~is----- 78 (164)
.+|+++|+|+++....+|+. ++++++ +||++||+|| ++|||+|.. + +|.|++++++++++++.+++ |+
T Consensus 1 s~g~~aP~f~l~~~~~~g~~--~~l~~~-~gk~vlv~f~-a~wC~~C~~-~~~~~l~~l~~~~~~~~v~~v~-v~~~~~~ 74 (158)
T 3eyt_A 1 SNAMKAPELQIQQWFNSATD--LTLADL-RGKVIVIEAF-QMLCPGCVM-HGIPLAQKVRAAFPEDKVAVLG-LHTVFEH 74 (158)
T ss_dssp CCCEECCCCCEEEEESCSSC--CCTGGG-TTSEEEEEEE-CTTCHHHHH-THHHHHHHHHHHSCTTTEEEEE-EECCCSC
T ss_pred CCCCcCCCceehhhhcCCCc--cCHHHh-CCCEEEEEEE-CCcCcchhh-hhhHHHHHHHHHhCcCCEEEEE-EEecccc
Confidence 36899999996421136776 999999 7998888888 899999998 3 89999999999888999999 77
Q ss_pred --cCCHHHHHHHHHHhCCCCceEEEEeCcc-----hHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCc
Q 045485 79 --VNDAFVMKAWKENLGINDEVLLLSDGNG-----VFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGA 151 (164)
Q Consensus 79 --~d~~~~~~~~~~~~~~~~~~~~l~D~~~-----~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~ 151 (164)
.++++.+++|+++++++ |+++.|.++ .+++.||+. ++ |++||||++|+|++.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~--- 137 (158)
T 3eyt_A 75 HEAMTPISLKAFLHEYRIK--FPVGVDQPGDGAMPRTMAAYQMR----------GT--PSLLLIDKAGDLRAHHFGD--- 137 (158)
T ss_dssp GGGSCHHHHHHHHHHTTCC--SCEEEECCCSSSSCHHHHHTTCC----------SS--SEEEEECTTSEEEEEEESC---
T ss_pred cccCCHHHHHHHHHHcCCC--ceEEEcCccchhhHHHHHHcCCC----------CC--CEEEEECCCCCEEEEEeCC---
Confidence 46899999999999999 999999987 799999996 34 5599999999999999863
Q ss_pred eeecCHHHHHh
Q 045485 152 FTFSGAEDMLK 162 (164)
Q Consensus 152 ~~~~~~~~~l~ 162 (164)
.+.+.+++.|+
T Consensus 138 ~~~~~l~~~i~ 148 (158)
T 3eyt_A 138 VSELLLGAEIA 148 (158)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 33444444444
No 57
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.95 E-value=2.3e-27 Score=165.72 Aligned_cols=133 Identities=16% Similarity=0.139 Sum_probs=112.7
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHH---hHHHHHhCCCcEEEEEe
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVE---KSAELKSKGVDIVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~---~~~~~~~~~v~vi~~is 78 (164)
..+.+|+++|+|++ .+.+|+. ++|+++ +||++||+|| ++|||+|+.+ +|.|++ ++++++++++.+++ |+
T Consensus 3 ~~~~~G~~ap~f~l--~~~~g~~--~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~~~~l~~~~~~~~~~vi~-i~ 74 (142)
T 3eur_A 3 AKNRLGTKALNFTY--TLDSGVK--GTLYQF-PAEYTLLFIN-NPGCHACAEM-IEGLKASPVINGFTAAKKLKVLS-IY 74 (142)
T ss_dssp CTTCTTSBCCCCEE--EETTSCE--EETTTC-CCSEEEEEEC-CSSSHHHHHH-HHHHHHCHHHHHHHHTTSEEEEE-EE
T ss_pred hhhcCCCccCCcEE--EcCCCCE--eeHHHc-CCCEEEEEEE-CCCCccHHHH-HHHHhhhHHHHHHhccCCeEEEE-EE
Confidence 45789999999995 5788988 999999 7898888888 9999999997 999999 99999999999999 77
Q ss_pred cCC-HHHHHHHHHHhCCCCceEEEEeCcch--HHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeec
Q 045485 79 VND-AFVMKAWKENLGINDEVLLLSDGNGV--FTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFS 155 (164)
Q Consensus 79 ~d~-~~~~~~~~~~~~~~~~~~~l~D~~~~--~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~ 155 (164)
.|. .+.+++|+++++++ |+.+.|.++. +++.|++. ++ |++||||++|+|++...+ .+
T Consensus 75 ~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~~------~~ 134 (142)
T 3eur_A 75 PDEELDEWKKHRNDFAKE--WTNGYDKELVIKNKNLYDLR----------AI--PTLYLLDKNKTVLLKDAT------LQ 134 (142)
T ss_dssp CSSCHHHHHHHGGGSCTT--SEEEECTTCHHHHTTCSCCT----------TC--SEEEEECTTCBEEEEEEC------HH
T ss_pred cCCCHHHHHHHHHhcccc--cccccCccchhhhhhhcCCC----------cC--CeEEEECCCCcEEecCCC------HH
Confidence 774 57889999999998 9999998875 78889886 34 569999999999988763 34
Q ss_pred CHHHHHh
Q 045485 156 GAEDMLK 162 (164)
Q Consensus 156 ~~~~~l~ 162 (164)
.+++.|+
T Consensus 135 ~l~~~l~ 141 (142)
T 3eur_A 135 KVEQYLA 141 (142)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4555554
No 58
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.94 E-value=5.2e-27 Score=171.13 Aligned_cols=121 Identities=20% Similarity=0.213 Sum_probs=109.3
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec--
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV-- 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~-- 79 (164)
+.+.+|+++|+|++ .+.+|+. ++|+++ +||++||+|| ++|||.|..+ ++.|+++++++.++ +.+++ |+.
T Consensus 5 ~~~~~g~~~p~f~l--~~~~G~~--~~l~~~-~gk~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~-~~~v~-v~~d~ 75 (188)
T 2cvb_A 5 PELPLESPLIDAEL--PDPRGGR--YRLSQF-HEPLLAVVFM-CNHCPYVKGS-IGELVALAERYRGK-VAFVG-INAND 75 (188)
T ss_dssp CCCCTTCBCCCCEE--ECTTSCE--EEGGGC-CSSEEEEEEE-CSSCHHHHTT-HHHHHHHHHHTTTT-EEEEE-EECCC
T ss_pred CcCCCCCCCCCcee--ecCCCCE--EeHHHh-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHhhcC-eEEEE-EEcCc
Confidence 56889999999994 5889987 999999 7998888888 9999999997 99999999999877 99999 787
Q ss_pred ------CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEE
Q 045485 80 ------NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLN 145 (164)
Q Consensus 80 ------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~ 145 (164)
|+++.+++|+++++++ |+++.|.++.+++.||+.. + |++||||++|+|++..
T Consensus 76 ~~~~~~d~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~----------~--P~~~lid~~G~i~~~g 133 (188)
T 2cvb_A 76 YEKYPEDAPEKMAAFAEEHGIF--FPYLLDETQEVAKAYRALR----------T--PEVFLFDERRLLRYHG 133 (188)
T ss_dssp TTTCGGGSHHHHHHHHHHHTCC--SCEEECSSSHHHHHTTCCE----------E--SEEEEECTTCBEEEEE
T ss_pred cccccccCHHHHHHHHHHhCCC--ceEEECCcchHHHHcCCCC----------C--CeEEEECCCCcEEEEE
Confidence 6889999999999999 9999999999999999873 3 6699999999999883
No 59
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.94 E-value=2.8e-27 Score=167.74 Aligned_cols=134 Identities=14% Similarity=0.166 Sum_probs=113.2
Q ss_pred CCCCCCCCCeeeeeec-CCCceeeeehhhhcCCCcEEEEEecCCCCcCCCc-CchhhHHHhHHHHHhCCCcEEEEEec--
Q 045485 4 ISVGDKLPDATLSYFD-SAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQ-KHLPGFVEKSAELKSKGVDIVACISV-- 79 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~-~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~-~~l~~l~~~~~~~~~~~v~vi~~is~-- 79 (164)
...|.++|+|++ .+ .+|+. ++|+++ +||++||+|| ++|||+|.. . +|.|++++++++++|+.+++ |+.
T Consensus 3 ~~~g~~~p~~~~--~~~~~g~~--~~l~~~-~gk~vlv~F~-a~~C~~C~~e~-~~~l~~l~~~~~~~~v~~v~-v~~~~ 74 (160)
T 3lor_A 3 SLDNAPLLELDV--QEWVNHEG--LSNEDL-RGKVVVVEVF-QMLCPGCVNHG-VPQAQKIHRMIDESQVQVIG-LHSVF 74 (160)
T ss_dssp -CTTCCBCCCCE--EEESSSCC--CCHHHH-TTSEEEEEEE-CTTCHHHHHTH-HHHHHHHHHHSCTTTEEEEE-EECCC
T ss_pred ccCCCcCCCccc--ccccCCCc--cCHHHh-CCCEEEEEEE-cCCCcchhhhh-hHHHHHHHHHhCcCCcEEEE-Eeccc
Confidence 347899999985 45 67877 999999 7998888888 889999998 4 89999999999988999999 775
Q ss_pred -----CCHHHHHHHHHHhCCCCceEEEEeCcch------HHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 80 -----NDAFVMKAWKENLGINDEVLLLSDGNGV------FTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 80 -----d~~~~~~~~~~~~~~~~~~~~l~D~~~~------~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
++++.+++|+++++++ |+++.|.++. ++++||+. ++ |++||||++|+|++.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~ 140 (160)
T 3lor_A 75 EHHDVMTPEALKVFIDEFGIK--FPVAVDMPREGQRIPSTMKKYRLE----------GT--PSIILADRKGRIRQVQFGQ 140 (160)
T ss_dssp SCGGGSCHHHHHHHHHHTTCC--SCEEEECCCTTCSSCHHHHHTTCC----------SS--SEEEEECTTSBEEEEEESC
T ss_pred cccccCCHHHHHHHHHHcCCC--CcEEECCccccchhhhHHHhcccC----------cc--ceEEEECCCCcEEEEecCc
Confidence 7899999999999999 9999999988 99999996 34 5699999999999998863
Q ss_pred CCceeecCHHHHHh
Q 045485 149 GGAFTFSGAEDMLK 162 (164)
Q Consensus 149 ~~~~~~~~~~~~l~ 162 (164)
.+.+.+++.|+
T Consensus 141 ---~~~~~l~~~i~ 151 (160)
T 3lor_A 141 ---VDDFVLGLLLG 151 (160)
T ss_dssp ---CCHHHHHHHHH
T ss_pred ---CCHHHHHHHHH
Confidence 23334444444
No 60
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.94 E-value=6.1e-27 Score=170.09 Aligned_cols=138 Identities=20% Similarity=0.215 Sum_probs=114.9
Q ss_pred CCCCCCCCCCeeeeeecC--CCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCC------cEE
Q 045485 3 AISVGDKLPDATLSYFDS--AGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGV------DIV 74 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~--~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v------~vi 74 (164)
++.+|+++|+|++ .+. +|+. ++|+++ +||++||+|| ++|||.|+.+ ++.|++++++++++|+ .++
T Consensus 30 ~~~~g~~~p~f~l--~~~~~~g~~--~~l~~~-~gk~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~~~~~v~~v 102 (183)
T 3lwa_A 30 DEADRQQLPDIGG--DSLMEEGTQ--INLSDF-ENQVVILNAW-GQWCAPCRSE-SDDLQIIHEELQAAGNGDTPGGTVL 102 (183)
T ss_dssp CGGGCCCCCCCEE--EBSSSTTCE--EEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHCC---CCSEEEE
T ss_pred ccccCCCCCceec--cccccCCcE--ecHHHh-CCCEEEEEEE-CCcCHhHHHH-HHHHHHHHHHHHhcCCCccCCcEEE
Confidence 4678999999994 577 8987 999999 7998888888 8999999997 9999999999999999 999
Q ss_pred EEEecCC--HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCce
Q 045485 75 ACISVND--AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAF 152 (164)
Q Consensus 75 ~~is~d~--~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~ 152 (164)
+ |+.|. ++.+++|+++++++ |+++.|+++.+.+.|+.... . ++ |++||||++|+|++.+.+. .
T Consensus 103 ~-v~~d~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v-----~--~~--P~~~lid~~G~i~~~~~g~---~ 167 (183)
T 3lwa_A 103 G-INVRDYSRDIAQDFVTDNGLD--YPSIYDPPFMTAASLGGVPA-----S--VI--PTTIVLDKQHRPAAVFLRE---V 167 (183)
T ss_dssp E-EECSCCCHHHHHHHHHHTTCC--SCEEECTTCGGGGGTTTCCT-----T--CC--SEEEEECTTSCEEEEECSC---C
T ss_pred E-EECCCCCHHHHHHHHHHcCCC--ccEEECCcchHHHHhccCCC-----C--CC--CeEEEECCCCcEEEEEcCC---C
Confidence 9 88876 89999999999999 99999999999999974211 0 23 6699999999999988853 3
Q ss_pred eecCHHHHHh
Q 045485 153 TFSGAEDMLK 162 (164)
Q Consensus 153 ~~~~~~~~l~ 162 (164)
+.+++++.|+
T Consensus 168 ~~~~l~~~l~ 177 (183)
T 3lwa_A 168 TSKDVLDVAL 177 (183)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 3444444444
No 61
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.94 E-value=7.3e-27 Score=164.42 Aligned_cols=134 Identities=24% Similarity=0.360 Sum_probs=114.3
Q ss_pred CCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec-CCHH
Q 045485 5 SVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV-NDAF 83 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~-d~~~ 83 (164)
++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.++++++++.++++.+++ |+. ++++
T Consensus 1 ~~G~~~p~~~--l~~~~g~~--~~l~~~-~gk~vlv~F~-~~~C~~C~~~-~~~l~~~~~~~~~~~v~vv~-v~~d~~~~ 72 (151)
T 2f9s_A 1 SEGSDAPNFV--LEDTNGKR--IELSDL-KGKGVFLNFW-GTWCEPCKKE-FPYMANQYKHFKSQGVEIVA-VNVGESKI 72 (151)
T ss_dssp -CCEECCCCE--EECTTCCE--EEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGGGTEEEEE-EEESCCHH
T ss_pred CCCCcCCcce--eEcCCCCE--EEHHHc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhccCCeEEEE-EECCCCHH
Confidence 4799999999 46888987 999999 7999888888 9999999997 99999999999988999999 666 4688
Q ss_pred HHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 84 VMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
.+++|+++++++ |+++.|.+..+++.||+. ++ |++||||++|+|++.+.+. .+.+.+++.|+.
T Consensus 73 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~G~---~~~~~l~~~l~~ 135 (151)
T 2f9s_A 73 AVHNFMKSYGVN--FPVVLDTDRQVLDAYDVS----------PL--PTTFLINPEGKVVKVVTGT---MTESMIHDYMNL 135 (151)
T ss_dssp HHHHHHHHHTCC--SCEEEETTSHHHHHTTCC----------SS--CEEEEECTTSEEEEEEESC---CCHHHHHHHHHH
T ss_pred HHHHHHHHcCCC--ceEEECCchHHHHhcCCC----------CC--CeEEEECCCCcEEEEEeCC---CCHHHHHHHHHH
Confidence 999999999999 999999999999999996 34 5699999999999988853 334445555543
No 62
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.94 E-value=4.3e-27 Score=168.17 Aligned_cols=141 Identities=15% Similarity=0.137 Sum_probs=107.4
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
+.+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|..+ +|.|++++++++++|+.+++ |+.|
T Consensus 3 ~~~~~g~~~p~f~--l~~~~G~~--~~l~~~-~gk~vlv~f~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~vv~-v~~d~ 74 (169)
T 2v1m_A 3 SSHKSWNSIYEFT--VKDINGVD--VSLEKY-RGHVCLIVNV-ACKCGATDKN-YRQLQEMHTRLVGKGLRILA-FPCNQ 74 (169)
T ss_dssp ----CCCSGGGCE--EEBTTSCE--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTEEEEE-EECCC
T ss_pred ccccCCcccccce--eecCCCCC--ccHHHc-CCCEEEEEEe-eccCCchHHH-HHHHHHHHHHhhcCCeEEEE-EECCc
Confidence 4678999999999 46889987 999999 7998888888 8999999997 99999999999999999999 7764
Q ss_pred -------CHHHHHHH-HHHhCCCCceEEEE--eCcchHHH-Hh--------CCccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 81 -------DAFVMKAW-KENLGINDEVLLLS--DGNGVFTK-AI--------GCELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 81 -------~~~~~~~~-~~~~~~~~~~~~l~--D~~~~~~~-~~--------gv~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
+++.+++| .++++++ |+++. |.++..++ .| |+... .+ ...|++||||++|+|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~------~i-~~~P~~~lid~~G~i 145 (169)
T 2v1m_A 75 FGGQEPWAEAEIKKFVTEKYGVQ--FDMFSKIKVNGSDADDLYKFLKSRQHGTLTN------NI-KWNFSKFLVDRQGQP 145 (169)
T ss_dssp STTCCCSCHHHHHHHHHHHHCCC--SEEBCCCCCSSTTSCHHHHHHHHHSCCSSSC------SC-CSTTCEEEECTTSCE
T ss_pred cCCCCCCCHHHHHHHHHHhcCCC--CceEEEEeecCccccHHHHHHHhhcCCccCC------cc-cccceEEEECCCCCE
Confidence 57899999 5999999 99997 76665442 23 44210 00 012569999999999
Q ss_pred EEEEeecCCceeecCHHHHHh
Q 045485 142 KVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~ 162 (164)
++.+.+. .+.+.+++.|+
T Consensus 146 ~~~~~g~---~~~~~l~~~i~ 163 (169)
T 2v1m_A 146 VKRYSPT---TAPYDIEGDIM 163 (169)
T ss_dssp EEEECTT---SCGGGGHHHHH
T ss_pred EEEcCCC---CCHHHHHHHHH
Confidence 9998853 23344444444
No 63
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.94 E-value=1.4e-26 Score=167.89 Aligned_cols=121 Identities=22% Similarity=0.387 Sum_probs=105.7
Q ss_pred CCCCCCCCCCCeeeeeecCCC--ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe-
Q 045485 2 AAISVGDKLPDATLSYFDSAG--ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS- 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g--~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is- 78 (164)
+.+.+|+++|+|++ .+.+| +. ++++++ +||++||+|| ++|||+|..+ +|.|++++++ ++.+++ |+
T Consensus 28 ~~~~~G~~~P~f~l--~~~~g~~~~--~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~----~v~vv~-vs~ 95 (176)
T 3kh7_A 28 PSALIGKPFPAFDL--PSVQDPARR--LTEADL-KGKPALVNVW-GTWCPSCRVE-HPELTRLAEQ----GVVIYG-INY 95 (176)
T ss_dssp TTTTTTSBCCCCEE--EBSSCTTSE--EEGGGG-CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHT----TCEEEE-EEE
T ss_pred cccccCCcCCCcEe--cccCCCCce--ecHHHh-CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHC----CCEEEE-EeC
Confidence 45789999999995 57788 55 999999 7999999888 9999999997 9999988764 899999 66
Q ss_pred cCCHHHHHHHHHHhCCCCceE-EEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 79 VNDAFVMKAWKENLGINDEVL-LLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
.|+++.+++|+++++++ |+ ++.|.++.+++.||+. ++ |++||||++|+|++.+.+.
T Consensus 96 ~d~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~ 152 (176)
T 3kh7_A 96 KDDNAAAIKWLNELHNP--YLLSISDADGTLGLDLGVY----------GA--PETYLIDKQGIIRHKIVGV 152 (176)
T ss_dssp SCCHHHHHHHHHHTTCC--CSEEEEETTCHHHHHHTCC----------SS--CEEEEECTTCBEEEEEESC
T ss_pred CCCHHHHHHHHHHcCCC--CceEEECCcchHHHHcCCC----------CC--CeEEEECCCCeEEEEEcCC
Confidence 68899999999999998 76 6889999999999997 33 6699999999999998863
No 64
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.94 E-value=3.9e-27 Score=171.42 Aligned_cols=142 Identities=15% Similarity=0.238 Sum_probs=116.3
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC-
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND- 81 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~- 81 (164)
.+.+|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++||++|..+ ++.|+++++++.+.++.+++ |+.|.
T Consensus 33 ~~~~g~~~p~f~--l~~~~G~~--~~l~~~-~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~vv~-v~~d~~ 104 (186)
T 1jfu_A 33 MASAPLKLPDLA--FEDADGKP--KKLSDF-RGKTLLVNLW-ATWCVPCRKE-MPALDELQGKLSGPNFEVVA-INIDTR 104 (186)
T ss_dssp ECCSCCBCCCCE--EECTTSCE--EEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHCBTTEEEEE-EECCCS
T ss_pred cccCCCcCCCcE--eEcCCCCE--eeHHHc-CCCEEEEEEE-eCCCHhHHHH-HHHHHHHHHHhccCCcEEEE-EECCCC
Confidence 467899999999 46889987 999999 7999988888 9999999997 99999999999888999999 88874
Q ss_pred -HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHH
Q 045485 82 -AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDM 160 (164)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~ 160 (164)
++.+++|+++++++ .|+++.|+++.+++.|++... ....|++||||++|+|++.+.+.. ....+++.+.
T Consensus 105 ~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~--------~~~~P~~~lid~~G~i~~~~~g~~-~~~~~~l~~~ 174 (186)
T 1jfu_A 105 DPEKPKTFLKEANLT-RLGYFNDQKAKVFQDLKAIGR--------ALGMPTSVLVDPQGCEIATIAGPA-EWASEDALKL 174 (186)
T ss_dssp CTTHHHHHHHHTTCC-TTCCEECTTCHHHHHHHTTTC--------CSSSSEEEEECTTSBEEEEEESCC-CTTSHHHHHH
T ss_pred CHHHHHHHHHHcCCC-CCceEECCcchHHHHhccccc--------cCCCCEEEEECCCCCEEEEEecCC-ccCHHHHHHH
Confidence 47889999999984 399999999999999998632 112366999999999999998642 1223344444
Q ss_pred Hh
Q 045485 161 LK 162 (164)
Q Consensus 161 l~ 162 (164)
|+
T Consensus 175 l~ 176 (186)
T 1jfu_A 175 IR 176 (186)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 65
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.94 E-value=9.1e-27 Score=162.41 Aligned_cols=123 Identities=16% Similarity=0.236 Sum_probs=109.7
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC---
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN--- 80 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d--- 80 (164)
|++|+++|+|++++.+.+|+. ++++++ +|+++||+|| ++|||.|..+ ++.++++++++.++ +.+++ |+.|
T Consensus 1 l~~g~~~P~f~~~~~~~~g~~--~~~~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~-~~~~~-v~~~~~~ 73 (148)
T 2b5x_A 1 MKLRQPMPELTGEKAWLNGEV--TREQLI-GEKPTLIHFW-SISCHLCKEA-MPQVNEFRDKYQDQ-LNVVA-VHMPRSE 73 (148)
T ss_dssp CCTTCBCCCCCCCSEEESCCC--CHHHHT-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTT-SEEEE-EECCCST
T ss_pred CCCCCCCCCCccccccccCcc--cchhhc-CCCEEEEEEE-cCCCHHHHHH-hHHHHHHHHHhcCC-cEEEE-EEcCCCc
Confidence 578999999996446778987 999999 7999998888 8999999997 99999999999866 99999 7765
Q ss_pred ---CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 81 ---DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+++.+++|+++++++ |+++.|.+..+++.||+. ++ |+++|||++|+|++.+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g 129 (148)
T 2b5x_A 74 DDLDPGKIKETAAEHDIT--QPIFVDSDHALTDAFENE----------YV--PAYYVFDKTGQLRHFQAG 129 (148)
T ss_dssp TTSSHHHHHHHHHHTTCC--SCEEECSSCHHHHHTCCC----------CS--SEEEEECTTCBEEEEEES
T ss_pred cccCHHHHHHHHHHcCCC--cceEECCchhHHHHhCCC----------CC--CEEEEECCCCcEEEEecC
Confidence 689999999999999 999999999999999997 34 569999999999998885
No 66
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.6e-27 Score=172.40 Aligned_cols=139 Identities=11% Similarity=0.130 Sum_probs=104.9
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
..+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|..+ +|.|++++++++++++.+++ |+.|
T Consensus 21 ~~~~~g~~~p~f~--l~~~~G~~--~~l~~~-~Gk~vlv~F~-atwC~~C~~~-~p~l~~l~~~~~~~~v~vv~-vs~d~ 92 (181)
T 2p31_A 21 QSMQQEQDFYDFK--AVNIRGKL--VSLEKY-RGSVSLVVNV-ASECGFTDQH-YRALQQLQRDLGPHHFNVLA-FPCNQ 92 (181)
T ss_dssp ------CCGGGCE--EEBTTSCE--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTEEEEE-EECCC
T ss_pred CcCCcCCccCceE--eecCCCCE--ecHHHc-CCCEEEEEEe-ccCCCCcHHH-HHHHHHHHHHhhcCCEEEEE-EECcC
Confidence 4578999999999 46889987 999999 7998888887 8999999998 99999999999999999999 8765
Q ss_pred -------CHHHHHHHHHH-hCCCCceEEEEe--CcchHHH---HhCCccccCCCCCCCCcc-ee----EEEEEecCCcEE
Q 045485 81 -------DAFVMKAWKEN-LGINDEVLLLSD--GNGVFTK---AIGCELDLSDKPMGLGVR-SR----RYALLAENGVVK 142 (164)
Q Consensus 81 -------~~~~~~~~~~~-~~~~~~~~~l~D--~~~~~~~---~~gv~~~~~~~~~~~~~~-~p----~~~lid~~G~I~ 142 (164)
+++++++|+++ ++++ |+++.| .++.... .|++. ++| .+ ++||||++|+|+
T Consensus 93 ~~~~e~~~~~~~~~~~~~~~~~~--~p~~~~~d~~g~~~~~~~~~~~~----------~~P~~~~~~~~~~lid~~G~i~ 160 (181)
T 2p31_A 93 FGQQEPDSNKEIESFARRTYSVS--FPMFSKIAVTGTGAHPAFKYLAQ----------TSGKEPTWNFWKYLVAPDGKVV 160 (181)
T ss_dssp STTCCCSCHHHHHHHHHHHHCCC--SCBBCCCCCSSTTSCHHHHHHHH----------HHSCCCCSTTCEEEECTTSCEE
T ss_pred CCCCCCCCHHHHHHHHHhhcCCC--ceeEeecccCCccchhhhhhhhh----------cCCCccccceeEEEEcCCCCEE
Confidence 68899999999 9999 999964 4443322 33333 122 01 699999999999
Q ss_pred EEEeecCCceeecCHHHHHhh
Q 045485 143 VLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+.+.+. ...+++++.|+.
T Consensus 161 ~~~~g~---~~~~~l~~~i~~ 178 (181)
T 2p31_A 161 GAWDPT---VSVEEVRPQITA 178 (181)
T ss_dssp EEECTT---SCHHHHHHHHHT
T ss_pred EEeCCC---CCHHHHHHHHHH
Confidence 998753 334455555554
No 67
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.94 E-value=1.3e-26 Score=161.80 Aligned_cols=123 Identities=17% Similarity=0.177 Sum_probs=108.8
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehh--hhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHH-HhCCCcEEEEEe
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVS--DLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL-KSKGVDIVACIS 78 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~--d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~-~~~~v~vi~~is 78 (164)
..+++|+++|+|++ .+.+|+. ++++ ++ +||++||+|| ++|||.|..+ ++.+.++++++ .++|+.+++ |+
T Consensus 3 ~~~~~g~~~p~~~l--~~~~g~~--~~l~~~~~-~gk~vll~F~-~~~C~~C~~~-~~~l~~l~~~~~~~~~~~~v~-v~ 74 (148)
T 3fkf_A 3 AKVTVGKSAPYFSL--PNEKGEK--LSRSAERF-RNRYLLLNFW-ASWCDPQPEA-NAELKRLNKEYKKNKNFAMLG-IS 74 (148)
T ss_dssp --CCTTSBCCCCCE--EBTTSCE--ECTTSTTT-TTSEEEEEEE-CGGGCCCHHH-HHHHHHHHHHTTTCTTEEEEE-EE
T ss_pred ccccCCCcCCCeEe--eCCCCCE--Eecccccc-CCcEEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcCCCCeEEEE-EE
Confidence 46899999999994 5788987 9999 99 7999988888 9999999997 99999999999 888899999 77
Q ss_pred cC-CHHHHHHHHHHhCCCCceEEEEeC---cchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 79 VN-DAFVMKAWKENLGINDEVLLLSDG---NGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 79 ~d-~~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
.| +.+.+++|+++++++ |+++.|. +..++++||+. ++ |+++|||++|+|++.+.
T Consensus 75 ~d~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~ 132 (148)
T 3fkf_A 75 LDIDREAWETAIKKDTLS--WDQVCDFTGLSSETAKQYAIL----------TL--PTNILLSPTGKILARDI 132 (148)
T ss_dssp CCSCHHHHHHHHHHTTCC--SEEECCSCGGGCHHHHHTTCC----------SS--SEEEEECTTSBEEEESC
T ss_pred CCCCHHHHHHHHHHcCCC--ceEEEccCCcchHHHHhcCCC----------Cc--CEEEEECCCCeEEEecC
Confidence 76 577899999999999 9999998 77999999997 34 56999999999998876
No 68
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.94 E-value=2.6e-26 Score=161.63 Aligned_cols=122 Identities=15% Similarity=0.292 Sum_probs=109.0
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe--cCC
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS--VND 81 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is--~d~ 81 (164)
..+|+++|+|+ +.+.+|+. ++++++ +|+++||+|| ++|||.|..+ ++.++++++++.++++.+++ |+ .|+
T Consensus 2 ~~~G~~~p~~~--l~~~~g~~--~~l~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~~vv~-v~~~~~~ 73 (153)
T 2l5o_A 2 SLDSKTAPAFS--LPDLHGKT--VSNADL-QGKVTLINFW-FPSCPGCVSE-MPKIIKTANDYKNKNFQVLA-VAQPIDP 73 (153)
T ss_dssp --CCTTCCSCE--EECTTSCE--EEHHHH-TTCEEEEEEE-CTTCTTHHHH-HHHHHHHHHHGGGTTEEEEE-EECTTSC
T ss_pred CCCCCCCCCcE--eecCCCCC--ccHHHh-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHhccCCeEEEE-EecCCCC
Confidence 46899999999 46888987 999999 7998888888 8999999997 99999999999988999999 77 578
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
.+.+++|+++++++ |+++.|.+..+++.||+. ++ |++||||++|+|++.+.+
T Consensus 74 ~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~i~----------~~--P~~~lid~~G~i~~~~~g 125 (153)
T 2l5o_A 74 IESVRQYVKDYGLP--FTVMYDADKAVGQAFGTQ----------VY--PTSVLIGKKGEILKTYVG 125 (153)
T ss_dssp HHHHHHHHHHTTCC--SEEEECSSCHHHHHHTCC----------SS--SEEEEECSSSCCCEEEES
T ss_pred HHHHHHHHHHcCCC--ceEEcCchHHHHHHcCCC----------cc--CeEEEECCCCcEEEEEcC
Confidence 99999999999999 999999999999999997 34 569999999999988885
No 69
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=169.26 Aligned_cols=148 Identities=14% Similarity=0.059 Sum_probs=109.0
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC--
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-- 80 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-- 80 (164)
.+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|..+ +|.|++++++++++|+.+++ |+.|
T Consensus 22 ~~~~g~~~p~f~--l~~~~G~~--v~l~~~-~Gk~vlv~F~-atwC~~C~~~-~~~l~~l~~~~~~~~v~vv~-is~d~~ 93 (185)
T 2gs3_A 22 SMRCARSMHEFS--AKDIDGHM--VNLDKY-RGFVCIVTNV-ASQGGKTEVN-YTQLVDLHARYAECGLRILA-FPCNQF 93 (185)
T ss_dssp GGGGCCCGGGCE--EEBTTSCE--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTEEEEE-EECCTT
T ss_pred hccCCCCcCCce--eEcCCCCE--eeHHHc-CCCEEEEEEe-cCCCCchHHH-HHHHHHHHHHhhcCCeEEEE-EECccc
Confidence 467999999999 46889987 999999 7998888887 8999999998 99999999999999999999 7754
Q ss_pred ------CHHHHHHHHHHhCCCCceEEEE--eCcchHHH-HhCCccccCC--CCCCC-CcceeEEEEEecCCcEEEEEeec
Q 045485 81 ------DAFVMKAWKENLGINDEVLLLS--DGNGVFTK-AIGCELDLSD--KPMGL-GVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 81 ------~~~~~~~~~~~~~~~~~~~~l~--D~~~~~~~-~~gv~~~~~~--~~~~~-~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
+++++++|+++++++ |+++. |.++..+. .|+....... +..+. .-..|++||||++|+|++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~ 171 (185)
T 2gs3_A 94 GKQEPGSNEEIKEFAAGYNVK--FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPM 171 (185)
T ss_dssp TTCCCSCHHHHHHHHHHTTCC--SEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTT
T ss_pred CCCCCCCHHHHHHHHHHcCCC--CeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCC
Confidence 578999999999999 99997 55554332 3311100000 00000 01136799999999999998853
Q ss_pred CCceeecCHHHHHhh
Q 045485 149 GGAFTFSGAEDMLKA 163 (164)
Q Consensus 149 ~~~~~~~~~~~~l~~ 163 (164)
.+.+++++.|+.
T Consensus 172 ---~~~~~l~~~i~~ 183 (185)
T 2gs3_A 172 ---EEPLVIEKDLPH 183 (185)
T ss_dssp ---SCGGGGGGGHHH
T ss_pred ---CCHHHHHHHHHH
Confidence 233445554443
No 70
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=169.32 Aligned_cols=136 Identities=14% Similarity=0.080 Sum_probs=105.2
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
..+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|..+ ++.|++++++++++++.+++ |+.|
T Consensus 19 ~~~~~g~~~p~f~--l~~~~G~~--~~l~~~-~gk~vll~F~-atwC~~C~~~-~~~l~~l~~~~~~~~v~vv~-vs~d~ 90 (183)
T 2obi_A 19 DDWRCARSMHEFS--AKDIDGHM--VNLDKY-RGFVCIVTNV-ASQCGKTEVN-YTQLVDLHARYAECGLRILA-FPCNQ 90 (183)
T ss_dssp CCGGGCCSGGGCE--EEBTTSCE--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTEEEEE-EECCC
T ss_pred cCCcccCcccceE--EEcCCCCE--eeHHHc-CCCEEEEEEe-CCCCCCcHHH-HHHHHHHHHHHhcCCeEEEE-EECCC
Confidence 4578999999999 46889987 999999 7998888887 8999999997 99999999999999999999 8754
Q ss_pred -------CHHHHHHHHHHhCCCCceEEEE--eCcchHHH-HhCCccccCC--CCCCC-CcceeEEEEEecCCcEEEEEee
Q 045485 81 -------DAFVMKAWKENLGINDEVLLLS--DGNGVFTK-AIGCELDLSD--KPMGL-GVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 81 -------~~~~~~~~~~~~~~~~~~~~l~--D~~~~~~~-~~gv~~~~~~--~~~~~-~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+++++++|+++++++ |+++. |.++..+. .|+....... +..+. .-..|++||||++|+|++.+.+
T Consensus 91 ~~~~e~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g 168 (183)
T 2obi_A 91 FGKQEPGSNEEIKEFAAGYNVK--FDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP 168 (183)
T ss_dssp STTCCCSCHHHHHHHHHTTTCC--SEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECT
T ss_pred CCCCCCCCHHHHHHHHHHcCCC--ceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCC
Confidence 789999999999999 99998 76665432 2311100000 00000 0112669999999999999875
No 71
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.94 E-value=9.8e-27 Score=166.43 Aligned_cols=141 Identities=14% Similarity=0.107 Sum_probs=106.5
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec--
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV-- 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~-- 79 (164)
..+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|..+ +|.|++++++++++++.+++ |+.
T Consensus 4 ~~~~~g~~~p~f~--l~~~~g~~--~~l~~~-~gk~vll~f~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~vv~-vs~d~ 75 (170)
T 2p5q_A 4 QTSKNPESVHDFT--VKDAKEND--VDLSIF-KGKVLLIVNV-ASKCGMTNSN-YAEMNQLYEKYKDQGLEILA-FPCNQ 75 (170)
T ss_dssp ------CCGGGCE--EEBTTSCE--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTEEEEE-EECCT
T ss_pred CcCCCCccccceE--EEcCCCCE--ecHHHh-CCCEEEEEEE-eccCCccHHH-HHHHHHHHHHhccCCEEEEE-EECCC
Confidence 3568999999999 56889987 999999 7998888888 8999999997 99999999999999999999 886
Q ss_pred ------CCHHHHHHHHH-HhCCCCceEEE--EeCcchHHH---------HhCCccccCCCCCCCCcc-eeEEEEEecCCc
Q 045485 80 ------NDAFVMKAWKE-NLGINDEVLLL--SDGNGVFTK---------AIGCELDLSDKPMGLGVR-SRRYALLAENGV 140 (164)
Q Consensus 80 ------d~~~~~~~~~~-~~~~~~~~~~l--~D~~~~~~~---------~~gv~~~~~~~~~~~~~~-~p~~~lid~~G~ 140 (164)
|+++.+++|++ +++++ |+++ .|.++..++ .+|+... ++| .|++||||++|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~--------~~p~~~~~~lid~~G~ 145 (170)
T 2p5q_A 76 FGEEEPGTNDQITDFVCTRFKSE--FPIFDKIDVNGENASPLYRFLKLGKWGIFGD--------DIQWNFAKFLVNKDGQ 145 (170)
T ss_dssp TTTCCCSCHHHHHHHHHHHTCCC--SCBBCCCBSSSTTBCHHHHHHHTHHHHTTCS--------CCCSTTCEEEECTTSC
T ss_pred CCCCCCCCHHHHHHHHHHhcCCC--ceeEeeeccCCCchHHHHHHHHhcCCCccCC--------cccccccEEEECCCCC
Confidence 46889999999 78999 9999 577665432 2244211 333 126999999999
Q ss_pred EEEEEeecCCceeecCHHHHHhh
Q 045485 141 VKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 141 I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
|++.+.+. .+.+++++.|+.
T Consensus 146 i~~~~~g~---~~~~~l~~~i~~ 165 (170)
T 2p5q_A 146 VVDRYYPT---TSPLSLERDIKQ 165 (170)
T ss_dssp EEEEECTT---SCGGGGHHHHHH
T ss_pred EEEeeCCC---CCHHHHHHHHHH
Confidence 99998853 334445555543
No 72
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.94 E-value=4.4e-26 Score=160.25 Aligned_cols=138 Identities=17% Similarity=0.286 Sum_probs=115.9
Q ss_pred CCCCCCCCCC-CeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 2 AAISVGDKLP-DATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 2 ~~l~~G~~~P-~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
|.+++|+++| +|+ +.+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.++++++++.++++.+++ |+.|
T Consensus 1 m~l~~G~~~p~~f~--l~~~~g~~--~~l~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~~~~v~-v~~d 72 (152)
T 2lja_A 1 MSLRSGNPSAASFS--YPDINGKT--VSLADL-KGKYIYIDVW-ATWCGPCRGE-LPALKELEEKYAGKDIHFVS-LSCD 72 (152)
T ss_dssp CCTTTTCCCSSSCE--EEETTTEE--EESTTT-TTSEEEEEEC-CSSCCGGGGT-HHHHHHHHHHSTTSSEEEEE-EECC
T ss_pred CccccCCCCCcccE--eecCCCCE--eeHHHc-CCCEEEEEEE-CCcCHhHHHH-hHHHHHHHHHhccCCeEEEE-EEcc
Confidence 6789999999 999 45788987 999999 7998888888 9999999998 99999999999888899999 7766
Q ss_pred -CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 81 -DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
..+.+++|+++++++ .++++.|.+..+++.|++. ++ |+++|||++|+|++...+ ..+.+.+++
T Consensus 73 ~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g---~~~~~~l~~ 136 (152)
T 2lja_A 73 KNKKAWENMVTKDQLK-GIQLHMGTDRTFMDAYLIN----------GI--PRFILLDRDGKIISANMT---RPSDPKTAE 136 (152)
T ss_dssp SCHHHHHHHHHHHTCC-SEEEECSSCTHHHHHTTCC----------SS--CCEEEECTTSCEEESSCC---CTTCHHHHH
T ss_pred CcHHHHHHHHHhcCCC-CceeecCcchhHHHHcCcC----------CC--CEEEEECCCCeEEEccCC---CCCHHHHHH
Confidence 467889999999988 5688889999999999997 34 559999999999987764 233445566
Q ss_pred HHhh
Q 045485 160 MLKA 163 (164)
Q Consensus 160 ~l~~ 163 (164)
+|+.
T Consensus 137 ~l~~ 140 (152)
T 2lja_A 137 KFNE 140 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 73
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.93 E-value=1.2e-26 Score=170.14 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=103.0
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
+.++.|+++|+|+ +.+.+|+. ++|+++ +||++||+|| ++|||+|+.+ ++.|++++++++++++.+|+ |+.|
T Consensus 20 s~~~~~~~~p~f~--l~~~~G~~--~~l~~~-~Gk~vll~F~-atwC~~C~~~-~~~l~~l~~~~~~~~v~vv~-vs~d~ 91 (190)
T 2vup_A 20 SHMSAASSIFDFE--VLDADHKP--YNLVQH-KGSPLLIYNV-ASKCGYTKGG-YETATTLYNKYKSQGFTVLA-FPCNQ 91 (190)
T ss_dssp ----CCCSGGGSC--CBBTTSSB--CCGGGG-TTSCEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTCEEEE-EECCC
T ss_pred ccCCCCCcccCeE--EEcCCCCE--EEHHHc-CCCEEEEEEe-cCCCCccHHH-HHHHHHHHHHHhcCCeEEEE-EEcCc
Confidence 3578899999999 46889987 999999 7999998888 8999999997 99999999999999999999 8876
Q ss_pred -------CHHHHHHHH-HHhCCCCceEEEE--eCcchHHH---------HhCCccccCCCCCCCCcc----eeEEEEEec
Q 045485 81 -------DAFVMKAWK-ENLGINDEVLLLS--DGNGVFTK---------AIGCELDLSDKPMGLGVR----SRRYALLAE 137 (164)
Q Consensus 81 -------~~~~~~~~~-~~~~~~~~~~~l~--D~~~~~~~---------~~gv~~~~~~~~~~~~~~----~p~~~lid~ 137 (164)
+++++++|+ ++++++ |+++. |.++..++ .|++. ++| .|++||||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~--~p~l~~~D~~~~~~~~~~~~l~~~~~~v~----------~~P~i~~~~~~~lid~ 159 (190)
T 2vup_A 92 FGGQEPGNEEEIKEFVCTKFKAE--FPIMAKINVNGENAHPLYEYMKKTKPGIL----------KTKAIKWNFTSFLIDR 159 (190)
T ss_dssp STTCCCSCHHHHHHHHHHHHCCC--SCBBCCCBSSSTTBCHHHHHHHHHSCCGG----------GCCSCCSTTCEEEECT
T ss_pred cCCCCCCCHHHHHHHHHHhcCCC--eEEEeecccCcccccHHHHHHHhhcCCcC----------CCccccccceEEEECC
Confidence 789999999 899999 99997 55555432 23554 233 126999999
Q ss_pred CCcEEEEEee
Q 045485 138 NGVVKVLNLE 147 (164)
Q Consensus 138 ~G~I~~~~~~ 147 (164)
+|+|++.+.+
T Consensus 160 ~G~i~~~~~g 169 (190)
T 2vup_A 160 DGVPVERFSP 169 (190)
T ss_dssp TSCEEEEECT
T ss_pred CCcEEEEECC
Confidence 9999999875
No 74
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.93 E-value=6.6e-26 Score=161.21 Aligned_cols=141 Identities=18% Similarity=0.242 Sum_probs=113.8
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
..+.+|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.|+++++++.++++.+++ |+.|
T Consensus 6 ~~~~~g~~~p~~~--l~~~~g~~--~~l~~~-~gk~vlv~f~-~~~C~~C~~~-~~~l~~l~~~~~~~~v~~v~-v~~d~ 77 (165)
T 3or5_A 6 QADARPTPAPSFS--GVTVDGKP--FSSASL-KGKAYIVNFF-ATWCPPCRSE-IPDMVQVQKTWASRGFTFVG-IAVNE 77 (165)
T ss_dssp -CCCCCCBCCCCE--EECTTSCE--EEGGGG-TTCEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTTTTEEEEE-EECSC
T ss_pred hhhcCCCCCCCce--eeCCCCCE--echhHc-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHhccCCeEEEE-EECCC
Confidence 4578999999999 46889988 999999 7998888888 9999999997 99999999999988999999 7766
Q ss_pred CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHH
Q 045485 81 DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDM 160 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~ 160 (164)
+++.+++|+++++++ |+++.|.+ .+.+.|+..... +.. ++ |++||||++|+|++.+.+. .+.+++++.
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~--~i~--~~--P~~~lid~~G~i~~~~~g~---~~~~~l~~~ 145 (165)
T 3or5_A 78 QLPNVKNYMKTQGII--YPVMMATP-ELIRAFNGYIDG--GIT--GI--PTSFVIDASGNVSGVIVGP---RSKADFDRI 145 (165)
T ss_dssp CHHHHHHHHHHHTCC--SCEEECCH-HHHHHHHTTSTT--CSC--SS--SEEEEECTTSBEEEEECSC---CCHHHHHHH
T ss_pred CHHHHHHHHHHcCCC--CceEecCH-HHHHHHhhhhcc--CCC--CC--CeEEEECCCCcEEEEEcCC---CCHHHHHHH
Confidence 488999999999999 99999976 888999543210 000 23 6699999999999888753 334445555
Q ss_pred Hh
Q 045485 161 LK 162 (164)
Q Consensus 161 l~ 162 (164)
|+
T Consensus 146 l~ 147 (165)
T 3or5_A 146 VK 147 (165)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 75
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=1.6e-26 Score=164.16 Aligned_cols=124 Identities=14% Similarity=0.241 Sum_probs=110.8
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
..+++|+++|+|++ .+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.++++++++.+.++.+++ |+.|.
T Consensus 13 ~~~~~G~~~p~f~l--~~~~g~~--~~l~~~-~gk~vll~F~-~~~C~~C~~~-~~~l~~~~~~~~~~~~~~v~-v~~d~ 84 (158)
T 3hdc_A 13 PLVRTGALAPNFKL--PTLSGEN--KSLAQY-RGKIVLVNFW-ASWCPYCRDE-MPSMDRLVKSFPKGDLVVLA-VNVEK 84 (158)
T ss_dssp CCCCTTSBCCCCEE--ECTTSCE--EESGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHSSTTSEEEEE-EECSS
T ss_pred cccCCCCcCCCcee--EcCCCCE--EehHHh-CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHcccCCeEEEE-EeCCH
Confidence 35789999999994 6888987 999999 7998888888 9999999997 99999999999888999999 88887
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecC
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG 149 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~ 149 (164)
..++|+++++++ |+++.|.++.+++.|++. ++ |++||||++|+|++.+.+..
T Consensus 85 --~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~G~~ 136 (158)
T 3hdc_A 85 --RFPEKYRRAPVS--FNFLSDATGQVQQRYGAN----------RL--PDTFIVDRKGIIRQRVTGGI 136 (158)
T ss_dssp --SCCGGGGGCCCS--CEEEECTTSHHHHHTTCC----------SS--SEEEEECTTSBEEEEEESCC
T ss_pred --HHHHHHHHcCCC--ceEEECchHHHHHHhCCC----------Cc--ceEEEEcCCCCEEEEEeCCC
Confidence 577899999999 999999999999999997 34 56999999999999999753
No 76
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.93 E-value=3.9e-27 Score=172.33 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=106.3
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
+.+..+.++|+|+ +.|.+|+. ++|+++ +||++||+|| ++|||+|..+ +|.|++++++|+++|+.+|+ |+.|
T Consensus 18 ~~~~~~~~~p~f~--l~d~~G~~--~~l~~~-~Gk~vlv~F~-atwC~~C~~~-~p~l~~l~~~~~~~~~~vi~-is~d~ 89 (187)
T 3dwv_A 18 KKMSAASSIFDFE--VLDADHKP--YNLVQH-KGSPLLIYNV-ASKCGYTKGG-YETATTLYNKYKSQGFTVLA-FPSNQ 89 (187)
T ss_dssp --CTTCCSGGGSC--CBBTTSCB--CCGGGG-TTSCEEEEEE-CCBCSCCTTH-HHHHHHHHHHHGGGTCEEEE-EEBCC
T ss_pred hhhcCCCccCCeE--EEcCCCCE--eeHHHh-CCCEEEEEEe-cCCCCCcHHH-HHHHHHHHHHhhhCCeEEEE-EECcc
Confidence 4588899999999 56889988 999999 7999888888 9999999998 99999999999999999999 7765
Q ss_pred -------CHHHHHHHHH-HhCCCCceEEEE--eCcchHHH-Hh--------CCccccCCCCCCCCcce-eEEEEEecCCc
Q 045485 81 -------DAFVMKAWKE-NLGINDEVLLLS--DGNGVFTK-AI--------GCELDLSDKPMGLGVRS-RRYALLAENGV 140 (164)
Q Consensus 81 -------~~~~~~~~~~-~~~~~~~~~~l~--D~~~~~~~-~~--------gv~~~~~~~~~~~~~~~-p~~~lid~~G~ 140 (164)
+++++++|++ +++++ |+++. |.++..+. .| ++... . .+|. +++||||++|+
T Consensus 90 ~~~~e~~~~~~~~~~~~~~~~~~--~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~-----~--~iP~~~~~~liD~~G~ 160 (187)
T 3dwv_A 90 FGGQEPGNEEEIKEFVCTKFKAE--FPIMAKINVNGENAHPLYEYMKKTKPGILAT-----K--AIKWNFTSFLIDRDGV 160 (187)
T ss_dssp CSSCSSSBTTHHHHSCCBCCCCS--SCBBCCBCCSCC-CCHHHHHHHHHSCCSBSS-----S--SCCSTTCEEEECTTSC
T ss_pred cCCCCCCCHHHHHHHHHhccCCC--CceeeccccCCcchhHHHHHHHhhcCCccCC-----C--ccccceeEEEECCCCC
Confidence 5788999998 45999 99997 55544331 22 32210 0 1220 06999999999
Q ss_pred EEEEEeecCCceeecCHHHHHh
Q 045485 141 VKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 141 I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
|++.+.+. .....+++.|+
T Consensus 161 i~~~~~g~---~~~~~l~~~i~ 179 (187)
T 3dwv_A 161 PVERFSPG---ASVKDIEEKLI 179 (187)
T ss_dssp EEEEECTT---CCHHHHHHHHH
T ss_pred EEEEECCC---CCHHHHHHHHH
Confidence 99998853 23334444444
No 77
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.93 E-value=4.3e-26 Score=158.47 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=106.5
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN- 80 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d- 80 (164)
..+.+|+++|+|+ +.+.+|+. +++++ +||++||+|| ++|||.|..+ ++.++++++++.+.++.+++ |+.|
T Consensus 7 ~~~~~g~~~p~~~--l~~~~g~~--~~l~~--~gk~~ll~f~-~~~C~~C~~~-~~~l~~~~~~~~~~~~~~v~-v~~d~ 77 (145)
T 3erw_A 7 AEEKQPAVPAVFL--MKTIEGED--ISIPN--KGQKTILHFW-TSWCPPCKKE-LPQFQSFYDAHPSDSVKLVT-VNLVN 77 (145)
T ss_dssp -----CCSCCEEE--EECTTSCE--EEESC--TTSEEEEEEE-CSSCHHHHHH-HHHHHHHHHHCCCSSEEEEE-EECGG
T ss_pred ccccCCCcCCCce--eecCCCCE--EeHHH--CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHcCCCCEEEEE-EEccC
Confidence 3578999999999 46888987 99999 5899999888 9999999997 99999999999877899999 7774
Q ss_pred ---CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 81 ---DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+++.+++|+++++++ |+++.|.+..+++.|++. ++ |+++|||++|+|++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g 133 (145)
T 3erw_A 78 SEQNQQVVEDFIKANKLT--FPIVLDSKGELMKEYHII----------TI--PTSFLLNEKGEIEKTKIG 133 (145)
T ss_dssp GSSCHHHHHHHHHHTTCC--SCEEECSSSHHHHHTTCC----------EE--SEEEEECTTCCEEEEEES
T ss_pred CcCCHHHHHHHHHHcCCc--eeEEEcCchhHHHhcCcC----------cc--CeEEEEcCCCcEEEEEcC
Confidence 889999999999999 999999999999999997 33 669999999999998885
No 78
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.93 E-value=2.9e-26 Score=161.70 Aligned_cols=133 Identities=22% Similarity=0.274 Sum_probs=114.4
Q ss_pred CCCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec--
Q 045485 2 AAISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV-- 79 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~-- 79 (164)
.++++|+++|+|++ .+.+|+. ++++++ + |++||+|| ++|||.|..+ ++.++++++++ ++.+++ |+.
T Consensus 3 ~~l~~g~~~p~f~l--~~~~g~~--~~l~~~-~-k~vll~f~-~~~C~~C~~~-~~~l~~l~~~~---~v~~v~-v~~d~ 70 (154)
T 3ia1_A 3 LAVKPGEPLPDFLL--LDPKGQP--VTPATV-S-KPAVIVFW-ASWCTVCKAE-FPGLHRVAEET---GVPFYV-ISREP 70 (154)
T ss_dssp -CCCSBEECCCCCE--ECTTSCE--ECTTTS-C-SSEEEEEE-CTTCHHHHHH-HHHHHHHHHHH---CCCEEE-EECCT
T ss_pred ccCCCCCcCCceEE--ECCCCCE--echHHc-C-CeEEEEEE-cccChhHHHH-HHHHHHHHHHc---CCeEEE-EeCCC
Confidence 46899999999994 6788987 999999 7 88998888 9999999997 99999999998 899999 787
Q ss_pred -CCHHHHHHHHHHhCCCCceEEEEe---CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeec
Q 045485 80 -NDAFVMKAWKENLGINDEVLLLSD---GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFS 155 (164)
Q Consensus 80 -d~~~~~~~~~~~~~~~~~~~~l~D---~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~ 155 (164)
++++.+++|+++++++ |+++.| .+..+++.||+. ++ |++||||++|+|++.+.+. .+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~---~~~~ 133 (154)
T 3ia1_A 71 RDTREVVLEYMKTYPRF--IPLLASDRDRPHEVAARFKVL----------GQ--PWTFVVDREGKVVALFAGR---AGRE 133 (154)
T ss_dssp TCCHHHHHHHHTTCTTE--EECBCCSSCCHHHHHTTSSBC----------SS--CEEEEECTTSEEEEEEESB---CCHH
T ss_pred cccHHHHHHHHHHcCCC--cccccccccchHHHHHHhCCC----------cc--cEEEEECCCCCEEEEEcCC---CCHH
Confidence 8899999999999999 999999 678999999986 34 5699999999999998853 3455
Q ss_pred CHHHHHhh
Q 045485 156 GAEDMLKA 163 (164)
Q Consensus 156 ~~~~~l~~ 163 (164)
.+++.|+.
T Consensus 134 ~l~~~l~~ 141 (154)
T 3ia1_A 134 ALLDALLL 141 (154)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55666554
No 79
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.93 E-value=1.1e-25 Score=159.32 Aligned_cols=121 Identities=16% Similarity=0.165 Sum_probs=103.6
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC-
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND- 81 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~- 81 (164)
....|+++|+|++ .+.+|+. ++|+++ +||++||+|| ++|||+|..+ +|.|++++++++++|+.+++ |+.|+
T Consensus 8 ~~~~g~~~p~f~l--~~~~G~~--~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~~vv~-i~~d~~ 79 (152)
T 2lrt_A 8 DKIKEASIIDIQL--KDLKGNT--RSLTDL-KGKVVLIDFT-VYNNAMSAAH-NLALRELYNKYASQGFEIYQ-ISLDGD 79 (152)
T ss_dssp SSSCTTCSCCCCE--EBTTSCE--ECTTTG-GGSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGGGTEEEEE-EECSCC
T ss_pred hhccCCCCCCeEE--EcCCCCE--EeHHHh-CCCEEEEEEE-cCCChhhHHH-HHHHHHHHHHhccCCeEEEE-EEccCC
Confidence 4568999999994 6889987 999999 7999888888 7999999997 99999999999999999999 78775
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCcch---HHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGNGV---FTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~~~---~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
.+..++|.+ +++ |+++.|.++. +++.||+. ++ |++||||++|+|++.+.+
T Consensus 80 ~~~~~~~~~--~~~--~~~~~d~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g 132 (152)
T 2lrt_A 80 EHFWKTSAD--NLP--WVCVRDANGAYSSYISLYNVT----------NL--PSVFLVNRNNELSARGEN 132 (152)
T ss_dssp HHHHHHHHT--TCS--SEEEECSSGGGCHHHHHHTCC----------SC--SEEEEEETTTEEEEETTT
T ss_pred HHHHHHHHh--CCC--ceEEECCCCcchHHHHHcCcc----------cC--ceEEEECCCCeEEEecCC
Confidence 445566654 477 9999999886 99999997 33 669999999999998775
No 80
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.4e-27 Score=169.59 Aligned_cols=137 Identities=17% Similarity=0.239 Sum_probs=114.4
Q ss_pred CCCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHH-hHHHHH-hCCCcEEEEEecC
Q 045485 3 AISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVE-KSAELK-SKGVDIVACISVN 80 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~-~~~~~~-~~~v~vi~~is~d 80 (164)
.+++|+++|+|++ .+.+|+. ++++++ +||++||+|| ++|||+|..+ ++.+++ ++++++ +.++.+++ |+.|
T Consensus 6 ~l~~g~~~p~f~l--~~~~g~~--~~l~~~-~gk~vll~f~-a~~C~~C~~~-~~~l~~~l~~~~~~~~~~~vv~-v~~d 77 (159)
T 2ls5_A 6 IVRIGEMAPDFTI--TLTDGKQ--VTLSSL-RGKVVMLQFT-ASWCGVCRKE-MPFIEKDIWLKHKDNADFALIG-IDRD 77 (159)
Confidence 5789999999994 5778987 999999 7998888888 9999999997 999998 988888 78899999 7777
Q ss_pred C-HHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHH
Q 045485 81 D-AFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAED 159 (164)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~ 159 (164)
. ++.+++|.++++++ |+++.|+++.+++.||+... ++ |++||||++|+|++.+.+. ...++++
T Consensus 78 ~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~--------~~--P~~~lid~~G~i~~~~~g~----~~~~l~~ 141 (159)
T 2ls5_A 78 EPLEKVLAFAKSTGVT--YPLGLDPGADIFAKYALRDA--------GI--TRNVLIDREGKIVKLTRLY----NEEEFAS 141 (159)
Confidence 5 46788999999999 99999999999999997532 34 5699999999999988752 2334555
Q ss_pred HHhh
Q 045485 160 MLKA 163 (164)
Q Consensus 160 ~l~~ 163 (164)
+|+.
T Consensus 142 ~l~~ 145 (159)
T 2ls5_A 142 LVQQ 145 (159)
Confidence 5543
No 81
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.93 E-value=8.6e-26 Score=168.28 Aligned_cols=145 Identities=16% Similarity=0.146 Sum_probs=104.4
Q ss_pred CCCCCCCCeeeeeecCC-CceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC---
Q 045485 5 SVGDKLPDATLSYFDSA-GELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN--- 80 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~~-g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d--- 80 (164)
..++++|+|+ +.+.+ |+. ++|+++ +||++||+|| ++|||+|+.+ +|.|++++++++++|+.||+ |+.|
T Consensus 21 ~~~~~~p~f~--l~~~~~G~~--v~l~~~-~Gk~vlv~Fw-atwC~~C~~e-~p~l~~l~~~~~~~g~~vv~-v~~d~~~ 92 (208)
T 2f8a_A 21 QSMQSVYAFS--ARPLAGGEP--VSLGSL-RGKVLLIENV-ASLGGTTVRD-YTQMNELQRRLGPRGLVVLG-FPCNQFG 92 (208)
T ss_dssp -CCCCGGGCE--ECBTTCSSC--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHGGGTEEEEE-EECCCST
T ss_pred hhcCccCceE--eeeCCCCCC--ccHHHc-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHHccCCCeEEEE-EECCccc
Confidence 4678899999 46888 987 999999 7998888888 9999999997 99999999999999999999 7764
Q ss_pred -----CHHHHHHHHH------HhCCCCceEEEEeCc--chH----HH----HhCCccc-----cCC------CCC--CCC
Q 045485 81 -----DAFVMKAWKE------NLGINDEVLLLSDGN--GVF----TK----AIGCELD-----LSD------KPM--GLG 126 (164)
Q Consensus 81 -----~~~~~~~~~~------~~~~~~~~~~l~D~~--~~~----~~----~~gv~~~-----~~~------~~~--~~~ 126 (164)
+++++++|++ +++++ ||+++|.+ +.. .. .++.... ..+ .+. +..
T Consensus 93 ~~e~d~~~~i~~f~~~~~~~~~~~~~--fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 93 HQENAKNEEILNSLKYVRPGGGFEPN--FMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp TTTCSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred ccCCCCHHHHHHHHHhcccccccccc--eEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 5789999998 88999 99997643 322 21 2221000 000 000 000
Q ss_pred cceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 127 VRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 127 ~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
...|++||||++|+|++.+.+. ...+++++.|+
T Consensus 171 ~~~p~tflID~~G~i~~~~~g~---~~~~~l~~~I~ 203 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRRYSRR---FQTIDIEPDIE 203 (208)
T ss_dssp CSTTCEEEECTTSCEEEEECTT---SCGGGGHHHHH
T ss_pred ccCceEEEEcCCCcEEEEeCCC---CCHHHHHHHHH
Confidence 1226699999999999999853 23344555444
No 82
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.93 E-value=2e-25 Score=158.72 Aligned_cols=130 Identities=12% Similarity=0.089 Sum_probs=103.6
Q ss_pred CCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcC-CCcCchhhHHHhHHHHHh----CCCcEEEEEecCC--
Q 045485 9 KLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPT-CSQKHLPGFVEKSAELKS----KGVDIVACISVND-- 81 (164)
Q Consensus 9 ~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~----~~v~vi~~is~d~-- 81 (164)
.+|+|+ +.+.+|+. ++++++ +||++||+|| ++|||. |..+ ++.|+++++++++ .++.+++ |+.|+
T Consensus 2 ~ap~f~--l~~~~G~~--~~l~~~-~gk~vll~f~-~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~~~vv~-vs~d~~~ 73 (164)
T 2ggt_A 2 LGGPFS--LTTHTGER--KTDKDY-LGQWLLIYFG-FTHCPDVCPEE-LEKMIQVVDEIDSITTLPDLTPLF-ISIDPER 73 (164)
T ss_dssp CCCCCE--EEETTSCE--EEGGGG-TTCEEEEEEE-CTTCSSHHHHH-HHHHHHHHHHHHHSSSSCCEEEEE-EESCTTT
T ss_pred CCCCeE--EEeCCCCE--EeHHHc-CCCEEEEEEE-eCCCCchhHHH-HHHHHHHHHHHhhccCCCcEEEEE-EEeCCCC
Confidence 579999 46889987 999999 7998888888 899998 9997 9999999999987 4899999 88764
Q ss_pred --HHHHHHHHHHhCCCCceEEEE---eCcchHHHHhCCccccCC-CCCC-C-CcceeEEEEEecCCcEEEEEeec
Q 045485 82 --AFVMKAWKENLGINDEVLLLS---DGNGVFTKAIGCELDLSD-KPMG-L-GVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 82 --~~~~~~~~~~~~~~~~~~~l~---D~~~~~~~~~gv~~~~~~-~~~~-~-~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
++.+++|+++++++ |+++. |....++++||+...... ...+ + -.+.+++||||++|+|++.+.+.
T Consensus 74 d~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 146 (164)
T 2ggt_A 74 DTKEAIANYVKEFSPK--LVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQN 146 (164)
T ss_dssp CCHHHHHHHHHTTCSS--CEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETT
T ss_pred CCHHHHHHHHHHcCCC--eEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCC
Confidence 89999999999999 99995 445779999999743100 0000 0 01223799999999999998753
No 83
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=5.2e-26 Score=160.28 Aligned_cols=129 Identities=12% Similarity=0.119 Sum_probs=105.2
Q ss_pred CCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHH
Q 045485 9 KLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAW 88 (164)
Q Consensus 9 ~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~ 88 (164)
++|+|. +. .+|+. ++|+++ +||++||+|| ++|||+|+.+ +|.|++++++++++++.+++ |+.|+++.+++|
T Consensus 4 pa~~~~--~~-~~G~~--~~l~~~-~gk~vlv~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~v~vv~-v~~d~~~~~~~~ 74 (151)
T 3raz_A 4 SADELA--GW-KDNTP--QSLQSL-KAPVRIVNLW-ATWCGPCRKE-MPAMSKWYKAQKKGSVDMVG-IALDTSDNIGNF 74 (151)
T ss_dssp ---CEE--ET-TTCCE--ECGGGC-CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCTTTEEEEE-EESSCHHHHHHH
T ss_pred Ccchhh--cc-cCCCE--ecHHHh-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHhccCCeEEEE-EECCChHHHHHH
Confidence 344544 32 58887 999999 7998888888 9999999998 99999999999888999999 999999999999
Q ss_pred HHHhCCCCceEEEEeCc---chHHHHhC--CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 89 KENLGINDEVLLLSDGN---GVFTKAIG--CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 89 ~~~~~~~~~~~~l~D~~---~~~~~~~g--v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+++++++ |+++.|.+ ..+++.|| +. ++ |++||||++|+|++.+.+. .+.+.+++.|+.
T Consensus 75 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~---~~~~~l~~~l~~ 137 (151)
T 3raz_A 75 LKQTPVS--YPIWRYTGANSRNFMKTYGNTVG----------VL--PFTVVEAPKCGYRQTITGE---VNEKSLTDAVKL 137 (151)
T ss_dssp HHHSCCS--SCEEEECCSCHHHHHHTTTCCSC----------CS--SEEEEEETTTTEEEECCSC---CCHHHHHHHHHH
T ss_pred HHHcCCC--CceEecCccchHHHHHHhCCccC----------CC--CEEEEECCCCcEEEEECCC---CCHHHHHHHHHH
Confidence 9999999 99999864 56888999 54 34 5699999999999988853 344555665554
No 84
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.93 E-value=3.1e-25 Score=166.21 Aligned_cols=132 Identities=13% Similarity=0.157 Sum_probs=98.1
Q ss_pred CCCCCCCCeeeeeecCC-CceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----
Q 045485 5 SVGDKLPDATLSYFDSA-GELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV---- 79 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~~-g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~---- 79 (164)
..+..+|+|+ +.+.+ |+. ++|+++ +||++||+|| ++|||+|. + +|.|++++++|+++|+.||+ |+.
T Consensus 30 ~~~~~~pdF~--l~d~~~G~~--v~Lsd~-~GKvvll~Fw-At~C~~c~-e-~p~L~~l~~~~~~~g~~Vlg-vs~d~f~ 100 (215)
T 2i3y_A 30 DEKGTIYDYE--AIALNKNEY--VSFKQY-VGKHILFVNV-ATYCGLTA-Q-YPELNALQEELKPYGLVVLG-FPCNQFG 100 (215)
T ss_dssp CCCCCGGGCE--EEBSSSSCE--EEGGGG-TTSEEEEEEE-CSSSGGGG-G-HHHHHHHHHHHGGGTEEEEE-EECCCST
T ss_pred cccCCcCCcE--eeeCCCCCE--EcHHHh-CCCEEEEEEe-CCCCCChH-h-HHHHHHHHHHhccCCeEEEE-EEccccC
Confidence 4567899999 46888 887 999999 7998888887 99999998 8 99999999999999999999 774
Q ss_pred ----CCHHHHHHHHH------HhCCCCceEEEEeCc--chHH-HHhCCccccCC---CCCC------------CCc-cee
Q 045485 80 ----NDAFVMKAWKE------NLGINDEVLLLSDGN--GVFT-KAIGCELDLSD---KPMG------------LGV-RSR 130 (164)
Q Consensus 80 ----d~~~~~~~~~~------~~~~~~~~~~l~D~~--~~~~-~~~gv~~~~~~---~~~~------------~~~-~~p 130 (164)
++++++++|++ +++++ ||+++|.+ +..+ ..|+....... +..+ ..+ ..|
T Consensus 101 ~~e~~~~~~i~~f~~~~~~~~~~~~~--fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~np 178 (215)
T 2i3y_A 101 KQEPGDNKEILPGLKYVRPGGGFVPS--FQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNF 178 (215)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTT
T ss_pred cCCCCCHHHHHHHHHhccchhccCcc--ceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCc
Confidence 46788999999 89999 99998653 3321 11211000000 0000 011 125
Q ss_pred EEEEEecCCcEEEEEee
Q 045485 131 RYALLAENGVVKVLNLE 147 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~~ 147 (164)
++||||++|+|++.+.+
T Consensus 179 ttfLID~~G~vv~~~~g 195 (215)
T 2i3y_A 179 EKFLVGPDGIPVMRWSH 195 (215)
T ss_dssp CEEEECTTSCEEEEECT
T ss_pred eEEEECCCCeEEEEeCC
Confidence 69999999999999885
No 85
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.92 E-value=3e-25 Score=160.16 Aligned_cols=134 Identities=17% Similarity=0.214 Sum_probs=105.7
Q ss_pred CCCCCCCC-CeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCc-CCCcCchhhHHHhHHHHHh--CCCcEEEEEec
Q 045485 4 ISVGDKLP-DATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTP-TCSQKHLPGFVEKSAELKS--KGVDIVACISV 79 (164)
Q Consensus 4 l~~G~~~P-~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp-~C~~~~l~~l~~~~~~~~~--~~v~vi~~is~ 79 (164)
+.+|+++| +|++ .+.+|+. ++|+++ +||++||+|| ++||| +|..+ ++.|+++++++.+ .++++|+ ||.
T Consensus 1 m~~G~~~P~~f~l--~d~~G~~--v~l~~~-~Gk~vll~F~-~t~C~~~C~~~-~~~l~~~~~~~~~~~~~~~vv~-is~ 72 (170)
T 3me7_A 1 MSLGTYVPGDITL--VDSYGNE--FQLKNL-KGKPIILSPI-YTHCRAACPLI-TKSLLKVIPKLGTPGKDFWVIT-FTF 72 (170)
T ss_dssp -CTTCBCCTTCEE--EETTCCE--EEGGGG-TTSCEEEEEE-CTTCCSHHHHH-HHHHHTTHHHHCCBTTTBEEEE-EEC
T ss_pred CCCCCcCCCCeEE--EcCCcCE--EchHHh-CCCEEEEEEE-CCCCCchhHHH-HHHHHHHHHHhhhcCCceEEEE-EEC
Confidence 46899999 9994 6889987 999999 7999998888 89998 59998 9999999999975 5699999 886
Q ss_pred C---CHHHHHHHHHHhCCCC-ceEEEE--e--CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 80 N---DAFVMKAWKENLGIND-EVLLLS--D--GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 80 d---~~~~~~~~~~~~~~~~-~~~~l~--D--~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
| +++.+++|+++++.+. .|.++. | ....++++||+...... .+ ..+.|++||||++|+|++.+.+.
T Consensus 73 d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~--~~-~~~~~~~~lID~~G~i~~~~~g~ 146 (170)
T 3me7_A 73 DPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAG--ND-FIHPNVVVVLSPELQIKDYIYGV 146 (170)
T ss_dssp CTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEET--TE-EECCCEEEEECTTSBEEEEEESS
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCC--Cc-cccCceEEEECCCCeEEEEEeCC
Confidence 5 7999999999999762 255543 3 23688999887543110 01 12447799999999999998764
No 86
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.9e-26 Score=164.43 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=92.9
Q ss_pred CCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec------
Q 045485 6 VGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV------ 79 (164)
Q Consensus 6 ~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~------ 79 (164)
-|..+|+|+ +.|.+|+. ++|+++ +||++||+|| ++|||+|. + +|.|++++++++++|+.+|+ |+.
T Consensus 8 ~~~~~~~f~--l~d~~G~~--~~l~~~-~Gk~vll~F~-a~wC~~C~-~-~~~l~~l~~~~~~~~v~vv~-vs~d~~~~~ 78 (171)
T 3cmi_A 8 HMSEFYKLA--PVDKKGQP--FPFDQL-KGKVVLIVNV-ASKCGFTP-Q-YKELEALYKRYKDEGFTIIG-FPCNQFGHQ 78 (171)
T ss_dssp --CGGGGCC--CBBTTSCB--CCGGGG-TTCEEEEEEE-ESSSCCHH-H-HHHHHHHHHHHGGGTEEEEE-EEECSCC--
T ss_pred chhheeeeE--EEcCCCCE--ecHHHc-CCCEEEEEEE-ecCCCcch-h-HHHHHHHHHHhccCCeEEEE-EECcccCCC
Confidence 367899999 56889988 999999 7999988888 99999999 8 99999999999999999999 776
Q ss_pred --CCHHHHHHHH-HHhCCCCceEEEEeCc--ch-HH--------HHhCCccccCCCCCCCCcc----eeEEEEEecCCcE
Q 045485 80 --NDAFVMKAWK-ENLGINDEVLLLSDGN--GV-FT--------KAIGCELDLSDKPMGLGVR----SRRYALLAENGVV 141 (164)
Q Consensus 80 --d~~~~~~~~~-~~~~~~~~~~~l~D~~--~~-~~--------~~~gv~~~~~~~~~~~~~~----~p~~~lid~~G~I 141 (164)
|+++++++|+ ++++++ |++++|.+ +. .. +.||+. ++| .|++||||++|+|
T Consensus 79 ~~d~~~~~~~~~~~~~~~~--~p~~~d~d~~~~~~~~~~~~~~~~~~~v~----------~~P~i~~~~~~~lid~~G~i 146 (171)
T 3cmi_A 79 EPGSDEEIAQFCQLNYGVT--FPIMKKIDVNGGNEDPVYKFLKSQKSGML----------GLRGIKWNFEKFLVDKKGKV 146 (171)
T ss_dssp ----------------CCC--SCBBCCCBSSSTTBCHHHHHHHHHSCCSS----------SCCSCCSTTCEEEECSSSCE
T ss_pred CCCCHHHHHHHHHhccCCC--ceEEeeccCCCccchHHHHHHHhccCCcC----------CCCcccccceEEEECCCCCE
Confidence 5678899999 999999 99999754 32 22 235554 333 1269999999999
Q ss_pred EEEEeecCCceeecCHHHHHh
Q 045485 142 KVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~ 162 (164)
++.+.+. .+...+++.|+
T Consensus 147 ~~~~~g~---~~~~~l~~~i~ 164 (171)
T 3cmi_A 147 YERYSSL---TKPSSLSETIE 164 (171)
T ss_dssp EEEECTT---SCGGGGHHHHH
T ss_pred EEEeCCC---CCHHHHHHHHH
Confidence 9998753 33444455444
No 87
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.92 E-value=7.9e-26 Score=161.40 Aligned_cols=131 Identities=14% Similarity=0.286 Sum_probs=111.8
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC---
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN--- 80 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d--- 80 (164)
+++|+++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.|+++++++. ++.+++ |+.|
T Consensus 11 ~~~g~~~p~~~--l~~~~g~~--~~l~~~-~gk~~lv~F~-~~~C~~C~~~-~~~l~~l~~~~~--~v~vv~-i~~d~~~ 80 (165)
T 3ha9_A 11 EEVLEREASFS--LTTIDGEV--ISLNNV-GGDVVILWFM-AAWCPSCVYM-ADLLDRLTEKYR--EISVIA-IDFWTAE 80 (165)
T ss_dssp HHHHHHHHCCC--EEBTTSCE--ECGGGC-CSSEEEEEEE-CTTCTTHHHH-HHHHHHHHHHCT--TEEEEE-EECCSHH
T ss_pred ccccCcCCCCE--eecCCCCE--eeHHHh-CCCEEEEEEE-CCCCcchhhh-HHHHHHHHHHcC--CcEEEE-EEecccc
Confidence 56789999999 46888987 999999 7998888888 9999999997 999999999986 899999 7775
Q ss_pred ----------------CHHHHHHHHHHhCC-CCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEE
Q 045485 81 ----------------DAFVMKAWKENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKV 143 (164)
Q Consensus 81 ----------------~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~ 143 (164)
+++.+++|++++++ + |+++.| +..++++|++. ++ |++||||++|+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d-~~~~~~~~~v~----------~~--P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 81 ALKALGLNKPGYPPPDTPEMFRKFIANYGDPS--WIMVMD-DGSLVEKFNVR----------SI--DYIVIMDKSSNVLY 145 (165)
T ss_dssp HHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT--SEEEEC-CSHHHHHTTCC----------SS--SEEEEEETTCCEEE
T ss_pred cccccccccccCCCCCCHHHHHHHHHHcCCCC--eeEEeC-hHHHHHHhCCC----------Cc--eEEEEEcCCCcEEE
Confidence 88999999999999 7 999999 99999999997 34 56999999999999
Q ss_pred EEeecCCce-eecCHHHHHhhC
Q 045485 144 LNLEEGGAF-TFSGAEDMLKAL 164 (164)
Q Consensus 144 ~~~~~~~~~-~~~~~~~~l~~l 164 (164)
.+ .. +...++++|+++
T Consensus 146 --~g---~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 146 --AG---TTPSLGELESVIKSV 162 (165)
T ss_dssp --EE---ESCCHHHHHHHHHHC
T ss_pred --eC---CCCCHHHHHHHHHHH
Confidence 43 23 455566666543
No 88
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.1e-25 Score=177.11 Aligned_cols=126 Identities=16% Similarity=0.156 Sum_probs=111.3
Q ss_pred CCCCCCCCCCeeee---eecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec
Q 045485 3 AISVGDKLPDATLS---YFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 3 ~l~~G~~~P~f~l~---~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~ 79 (164)
.+++|+++|+|+.. +.+.+|+. ++++++ +||++||+|| ++|||+|+.+ +|.|++++++++++++.+|+ |+.
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~--vsLsdl-~GK~vLl~F~-atwC~~C~~~-~p~L~~l~~~~~~~~v~vi~-Vs~ 123 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKP--IDLKSL-RGKVVLIDFW-AYSCINCQRA-IPHVVGWYQAYKDSGLAVIG-VHT 123 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCC--CCGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHGGGTEEEEE-EEC
T ss_pred ccCCCCcCCCccccccccCCCCCCE--EcHHHh-CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHhhcCCeEEEE-EEC
Confidence 57899999999811 24668887 999999 7999888888 8999999997 99999999999988999999 775
Q ss_pred ------CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 80 ------NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 80 ------d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
++++.+++|+++++++ |+++.|.+..+++.|++.. + |++||||++|+|++.+.+.
T Consensus 124 d~~~~~d~~~~~~~~~~~~~l~--fpv~~D~~~~l~~~ygV~~----------~--Pt~~lID~~G~Iv~~~~G~ 184 (352)
T 2hyx_A 124 PEYAFEKVPGNVAKGAANLGIS--YPIALDNNYATWTNYRNRY----------W--PAEYLIDATGTVRHIKFGE 184 (352)
T ss_dssp CSSGGGGCHHHHHHHHHHHTCC--SCEEECTTSHHHHHTTCCE----------E--SEEEEECTTSBEEEEEESB
T ss_pred CcccccCCHHHHHHHHHHcCCC--ccEEeCCcHHHHHHcCCCc----------c--CEEEEEeCCCeEEEEEcCC
Confidence 4789999999999999 9999999999999999963 3 6699999999999998863
No 89
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.92 E-value=8e-25 Score=163.05 Aligned_cols=132 Identities=12% Similarity=0.125 Sum_probs=96.2
Q ss_pred CCCCCCCCeeeeeecCC-CceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----
Q 045485 5 SVGDKLPDATLSYFDSA-GELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV---- 79 (164)
Q Consensus 5 ~~G~~~P~f~l~~~~~~-g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~---- 79 (164)
.....+|+|+ +.+.+ |+. ++|+++ +||++||+|| ++|||+| .+ +|.|++++++|+++|+.||+ |+.
T Consensus 12 ~~~~~~pdF~--l~d~~~G~~--v~Ls~~-kGKvvll~F~-At~C~~c-~e-~p~L~~l~~~~~~~g~~vlg-vs~d~f~ 82 (207)
T 2r37_A 12 GISGTIYEYG--ALTIDGEEY--IPFKQY-AGKYVLFVNV-ASYGGLT-GQ-YIELNALQEELAPFGLVILG-FPCNQFG 82 (207)
T ss_dssp ---CCGGGCE--EEBTTSSCE--EEGGGG-TTSEEEEEEE-CSSSTTT-TH-HHHHHHHHHHHGGGTEEEEE-EECCCBT
T ss_pred cccCccCCeE--eeeCCCCCE--EcHHHh-CCCEEEEEEe-CCCCCCh-HH-HHHHHHHHHHhccCCEEEEE-EECcccC
Confidence 3456899999 46888 887 999999 7998888887 9999999 67 99999999999999999999 773
Q ss_pred ----CCHHHHHHHHH------HhCCCCceEEEEeCc--chHH-HHhCCcccc-C--CCCCC------------CCc-cee
Q 045485 80 ----NDAFVMKAWKE------NLGINDEVLLLSDGN--GVFT-KAIGCELDL-S--DKPMG------------LGV-RSR 130 (164)
Q Consensus 80 ----d~~~~~~~~~~------~~~~~~~~~~l~D~~--~~~~-~~~gv~~~~-~--~~~~~------------~~~-~~p 130 (164)
++++++++|++ +++++ ||+++|.+ +..+ ..|+..... . .+..+ ..+ ..|
T Consensus 83 ~~e~~~~~~i~~f~~~~~~~~~~~~~--fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 83 KQEPGENSEILPTLKYVRPGGGFVPN--FQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCCCS--SEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred cCCCCCHHHHHHHHHhcchhhccCcc--ceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 46789999999 89999 99998653 3321 112111000 0 00000 001 225
Q ss_pred EEEEEecCCcEEEEEee
Q 045485 131 RYALLAENGVVKVLNLE 147 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~~ 147 (164)
++||||++|+|++.+.+
T Consensus 161 ttflID~~G~i~~~~~g 177 (207)
T 2r37_A 161 EKFLVGPDGIPIMRWHH 177 (207)
T ss_dssp CEEEECTTSCEEEEECT
T ss_pred eEEEECCCCcEEEEECC
Confidence 79999999999999985
No 90
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.92 E-value=6.3e-24 Score=153.40 Aligned_cols=134 Identities=16% Similarity=0.154 Sum_probs=103.4
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCc-CCCcCchhhHHHhHHHHHhCC--CcEEEEEec-
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTP-TCSQKHLPGFVEKSAELKSKG--VDIVACISV- 79 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp-~C~~~~l~~l~~~~~~~~~~~--v~vi~~is~- 79 (164)
..+|.++|+|+ +.|.+|+. ++|+++ +||++||+|| .+||| +|..+ ++.|.++++.+++.+ +.+|+ ||.
T Consensus 6 ~P~~~~~PdF~--L~d~~G~~--v~l~d~-~Gk~vll~F~-~t~Cp~~Cp~~-~~~l~~l~~~~~~~~~~v~~v~-isvD 77 (170)
T 4hde_A 6 KPLNWDLETFQ--FTNQDGKP--FGTKDL-KGKVWVADFM-FTNCQTVCPPM-TANMAKLQKMAKEEKLDVQFVS-FSVD 77 (170)
T ss_dssp SCCCBCCCCCE--EECTTSCE--EEHHHH-TTSCEEEEEE-CTTCSSSHHHH-HHHHHHHHHHHHHTTCCCEEEE-EESC
T ss_pred cCCCCcCCCcE--EECCCCCE--EeHHHh-CCCEEEEEEE-CCCCCCcccHH-HHHHHHHHHhhhcccccceeEe-eecC
Confidence 45789999999 56999998 999999 7999999998 89998 79997 999999999998665 77788 775
Q ss_pred ---CCHHHHHHHHHHhCCCC-ceEEEEeCcch-H----HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 80 ---NDAFVMKAWKENLGIND-EVLLLSDGNGV-F----TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 80 ---d~~~~~~~~~~~~~~~~-~~~~l~D~~~~-~----~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|+++.+++|+++++.+. .|.++.+.+.. + ...|+......+. +.-.+++++||||++|+|+..+.+
T Consensus 78 p~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~H~~~~~liD~~G~i~~~~~g 152 (170)
T 4hde_A 78 PDLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPEN--GQVIHGTSFYLIDQNGKVMKKYSG 152 (170)
T ss_dssp TTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTT--SCCBCCCEEEEECTTSCEEEEEES
T ss_pred cccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCC--ceEEeeeEEEEEcCCCeEEEEECC
Confidence 57999999999988652 47888876432 2 2345554332111 111355789999999999998875
No 91
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.92 E-value=2.5e-25 Score=161.64 Aligned_cols=126 Identities=12% Similarity=0.140 Sum_probs=99.6
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV---- 79 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~---- 79 (164)
-.+|..+|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+|+.+ +|.|++++++++++|+.+|+ |+.
T Consensus 12 ~~~~~~~p~f~--l~d~~G~~--v~l~~~-~Gk~vlv~F~-atwC~~C~~~-~p~l~~l~~~~~~~~~~vi~-is~d~~~ 83 (180)
T 3kij_A 12 KPKINSFYAFE--VKDAKGRT--VSLEKY-KGKVSLVVNV-ASDCQLTDRN-YLGLKELHKEFGPSHFSVLA-FPCNQFG 83 (180)
T ss_dssp CCCCCCGGGCE--EEBTTSCE--EEGGGG-TTSEEEEEEE-CSSSTTHHHH-HHHHHHHHHHHTTTSEEEEE-EECCCST
T ss_pred cCCcCcccceE--EecCCCCE--ecHHHc-CCCEEEEEEE-ecCCCCcHHH-HHHHHHHHHHhccCCeEEEE-EECCccc
Confidence 35799999999 56889987 999999 7998877777 9999999998 99999999999999999999 774
Q ss_pred ----CCHHHHHHHHHH-hCCCCceEEEEeCc--chH---HHHhCCccccCCCCCCCCcceeE----EEEEecCCcEEEEE
Q 045485 80 ----NDAFVMKAWKEN-LGINDEVLLLSDGN--GVF---TKAIGCELDLSDKPMGLGVRSRR----YALLAENGVVKVLN 145 (164)
Q Consensus 80 ----d~~~~~~~~~~~-~~~~~~~~~l~D~~--~~~---~~~~gv~~~~~~~~~~~~~~~p~----~~lid~~G~I~~~~ 145 (164)
|+++++++|+++ ++++ |+++.+.+ +.. ...|..... + ..|+ +||||++|+|++.+
T Consensus 84 ~~~~d~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~------~---~~p~~~~~~~lid~~G~i~~~~ 152 (180)
T 3kij_A 84 ESEPRPSKEVESFARKNYGVT--FPIFHKIKILGSEGEPAFRFLVDSS------K---KEPRWNFWKYLVNPEGQVVKFW 152 (180)
T ss_dssp TCCCSCHHHHHHHHHHHHCCC--SCBBCCCCCSSTTCCHHHHHHHHHH------T---CCCSSTTCEEEECTTSCEEEEE
T ss_pred cCCCCCHHHHHHHHHHhcCCC--CceeeeeeccCccccHHHHHHHhcC------C---CCccccceEEEECCCCCEEEEE
Confidence 488999999999 9999 99977432 211 112211100 0 1144 99999999999998
Q ss_pred eec
Q 045485 146 LEE 148 (164)
Q Consensus 146 ~~~ 148 (164)
.+.
T Consensus 153 ~g~ 155 (180)
T 3kij_A 153 RPE 155 (180)
T ss_dssp CTT
T ss_pred CCC
Confidence 864
No 92
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.92 E-value=1.3e-24 Score=149.49 Aligned_cols=131 Identities=18% Similarity=0.237 Sum_probs=108.9
Q ss_pred CCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC-HHHHH
Q 045485 8 DKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND-AFVMK 86 (164)
Q Consensus 8 ~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~-~~~~~ 86 (164)
.++|+|+ +.+.+|+. ++++++ +||+++|+|| ++|||.|..+ ++.++++++++. ++.+++ |+.|+ ++.++
T Consensus 2 ~~~p~~~--l~~~~g~~--~~l~~~-~~k~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~~~~~-v~~~~~~~~~~ 71 (136)
T 1lu4_A 2 DERLQFT--ATTLSGAP--FDGASL-QGKPAVLWFW-TPWCPFCNAE-APSLSQVAAANP--AVTFVG-IATRADVGAMQ 71 (136)
T ss_dssp GGGGCCE--EEBTTSCE--EEGGGG-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EECSSCHHHHH
T ss_pred CCCCCeE--eecCCCCe--ecHHHh-CCCEEEEEEE-CCcChhHHHH-HHHHHHHHHHCC--CcEEEE-EEcCCCHHHHH
Confidence 4689998 56888987 999999 7999999998 9999999997 999999999886 899999 77765 89999
Q ss_pred HHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 87 AWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 87 ~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+|+++++++ |+++.|.+..+++.|++. ++ |++++||++|+|+ .+.+..+..+.+.+++.|+.
T Consensus 72 ~~~~~~~~~--~~~~~d~~~~~~~~~~i~----------~~--P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ 133 (136)
T 1lu4_A 72 SFVSKYNLN--FTNLNDADGVIWARYNVP----------WQ--PAFVFYRADGTST-FVNNPTAAMSQDELSGRVAA 133 (136)
T ss_dssp HHHHHHTCC--SEEEECTTSHHHHHTTCC----------SS--SEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHH
T ss_pred HHHHHcCCC--ceEEECCchhHHHhcCCC----------CC--CEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHH
Confidence 999999999 999999999999999996 34 5699999999999 66622223334455555554
No 93
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.92 E-value=8.7e-25 Score=149.91 Aligned_cols=130 Identities=19% Similarity=0.268 Sum_probs=109.3
Q ss_pred CCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEE------ecCCH
Q 045485 9 KLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACI------SVNDA 82 (164)
Q Consensus 9 ~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~i------s~d~~ 82 (164)
++|+|+ +.+.+|+. ++++++ +||++||+|| ++|||.|..+ ++.++++++++ ..++.+++ + ..++.
T Consensus 1 ~~p~f~--l~~~~g~~--~~l~~~-~gk~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~-~~~~~~v~-i~~~~~~~~~~~ 71 (138)
T 4evm_A 1 EVADFE--LMGVDGKT--YRLSDY-KGKKVYLKFW-ASWCSICLAS-LPDTDEIAKEA-GDDYVVLT-VVSPGHKGEQSE 71 (138)
T ss_dssp CCCCCE--EEBTTSCE--EEGGGG-TTSEEEEEEC-CTTCHHHHHH-HHHHHHHHHTC-TTTEEEEE-EECTTSTTCCCH
T ss_pred CCCcce--eECCCCCE--EEHHHh-CCCEEEEEEE-cCcCHHHHHH-HHHHHHHHHHh-CCCcEEEE-EEcCCCCchhhH
Confidence 479999 46889987 999999 7998888888 9999999997 99999999884 46788888 5 45688
Q ss_pred HHHHHHHHHhCC-CCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHH
Q 045485 83 FVMKAWKENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDML 161 (164)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l 161 (164)
+.+++|.+++++ + |+++.|.+..++++||+. ++ |+++|||++|+|++.+.+. .+.+++.+.|
T Consensus 72 ~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~---~~~~~l~~~l 134 (138)
T 4evm_A 72 ADFKNWYKGLDYKN--LPVLVDPSGKLLETYGVR----------SY--PTQAFIDKEGKLVKTHPGF---MEKDAILQTL 134 (138)
T ss_dssp HHHHHHHTTCCCTT--CCEEECTTCHHHHHTTCC----------SS--SEEEEECTTCCEEEEEESC---CCHHHHHHHH
T ss_pred HHHHHHHhhcCCCC--eeEEECcchHHHHHcCcc----------cC--CeEEEECCCCcEEEeecCC---CcHHHHHHHH
Confidence 999999999999 6 999999999999999996 34 5699999999999998853 3455566666
Q ss_pred hhC
Q 045485 162 KAL 164 (164)
Q Consensus 162 ~~l 164 (164)
++|
T Consensus 135 ~~l 137 (138)
T 4evm_A 135 KEL 137 (138)
T ss_dssp HHC
T ss_pred Hhh
Confidence 553
No 94
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.92 E-value=1.7e-24 Score=155.06 Aligned_cols=128 Identities=17% Similarity=0.193 Sum_probs=103.4
Q ss_pred CCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcC-CCcCchhhHHHhHHHHHh----CCCcEEEEEecC----C
Q 045485 11 PDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPT-CSQKHLPGFVEKSAELKS----KGVDIVACISVN----D 81 (164)
Q Consensus 11 P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~----~~v~vi~~is~d----~ 81 (164)
|+|+ +.+.+|+. ++++++ +||++||+|| ++|||+ |..+ ++.|+++++++++ .++.+|+ |+.| +
T Consensus 7 p~f~--l~~~~G~~--~~l~~~-~gk~vll~F~-~~~C~~~C~~~-~~~l~~l~~~~~~~~~~~~v~vv~-is~d~~~d~ 78 (171)
T 2rli_A 7 GDFH--LLDHRGRA--RCKADF-RGQWVLMYFG-FTHCPDICPDE-LEKLVQVVRQLEAEPGLPPVQPVF-ITVDPERDD 78 (171)
T ss_dssp SCCE--EEETTSCE--EETTTT-TTSEEEEEEE-CTTCSSSHHHH-HHHHHHHHHHHHHSTTSCCEEEEE-EESCSTTCC
T ss_pred CCeE--EEeCCCCE--EeHHHh-CCCEEEEEEE-cCCCCchhHHH-HHHHHHHHHHHhhccCCCceEEEE-EEECCCCCC
Confidence 8999 46888987 999999 7998888887 899997 9998 9999999999986 5899999 8876 6
Q ss_pred HHHHHHHHHHhCCCCceEEEEeCc---chHHHHhCCccccCCC-CCC-C-CcceeEEEEEecCCcEEEEEeec
Q 045485 82 AFVMKAWKENLGINDEVLLLSDGN---GVFTKAIGCELDLSDK-PMG-L-GVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~~~-~~~-~-~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
++.+++|+++++++ |+++.|.. ..++++||+....... ..+ + ..+.|++||||++|+|++.+.+.
T Consensus 79 ~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 149 (171)
T 2rli_A 79 VEAMARYVQDFHPR--LLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS 149 (171)
T ss_dssp HHHHHHHHHTTCTT--CCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS
T ss_pred HHHHHHHHHHcCCC--eEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC
Confidence 89999999999999 99999753 5789999997432100 000 0 01335799999999999998753
No 95
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.92 E-value=2.4e-25 Score=159.42 Aligned_cols=133 Identities=18% Similarity=0.192 Sum_probs=107.5
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcC-CCcCchhhHHHhHHHHHhC---CCcEEEEEec
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPT-CSQKHLPGFVEKSAELKSK---GVDIVACISV 79 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~~---~v~vi~~is~ 79 (164)
..+|+++|+|+ +.+.+| . ++++++ +||++||+|| ++|||. |+.+ ++.|++++++++++ ++.+++ |+.
T Consensus 10 ~~~G~~~p~f~--l~~~~g-~--~~l~~~-~gk~vll~f~-~~~C~~~C~~~-~~~l~~~~~~~~~~~~~~v~vv~-is~ 80 (172)
T 2k6v_A 10 RLLNPKPVDFA--LEGPQG-P--VRLSQF-QDKVVLLFFG-FTRCPDVCPTT-LLALKRAYEKLPPKAQERVQVIF-VSV 80 (172)
T ss_dssp EEEEEEECCCE--EECSSS-E--EEGGGS-TTSEEEEEEE-CTTCSSHHHHH-HHHHHHHHTTSCHHHHTTEEEEE-EES
T ss_pred cccCCCCCCeE--EEcCCC-C--CcHHHh-CCCEEEEEEE-CCCCcchhHHH-HHHHHHHHHHhhhhccCCEEEEE-EEE
Confidence 34788999999 568889 7 999999 7998888888 899997 9997 99999999999865 799999 885
Q ss_pred C----CHHHHHHHHHHhCCCCceEEEEeCc---chHHHHhCCccccCCC--CCCC-CcceeEEEEEecCCcEEEEEeec
Q 045485 80 N----DAFVMKAWKENLGINDEVLLLSDGN---GVFTKAIGCELDLSDK--PMGL-GVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 80 d----~~~~~~~~~~~~~~~~~~~~l~D~~---~~~~~~~gv~~~~~~~--~~~~-~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
| +++.+++|+++++.+ |++++|.+ ..++++||+....... ...+ ....|++|||| +|+|++.+.+.
T Consensus 81 d~~~d~~~~~~~~~~~~~~~--~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~ 156 (172)
T 2k6v_A 81 DPERDPPEVADRYAKAFHPS--FLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPD 156 (172)
T ss_dssp CTTTCCHHHHHHHHHHHCTT--EEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHH
T ss_pred CCCCCCHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCC
Confidence 4 689999999999999 99999987 6899999986431100 0000 01347799999 99999998853
No 96
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.91 E-value=1.6e-24 Score=160.16 Aligned_cols=133 Identities=17% Similarity=0.083 Sum_probs=103.9
Q ss_pred CCCCCCC--CCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcC-CCcCchhhHHHhHHHHHhC---CCcEEEEE
Q 045485 4 ISVGDKL--PDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPT-CSQKHLPGFVEKSAELKSK---GVDIVACI 77 (164)
Q Consensus 4 l~~G~~~--P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~-C~~~~l~~l~~~~~~~~~~---~v~vi~~i 77 (164)
..+|+++ |+|+ +.+.+|+. ++++++ +||++||+|| ++|||. |..+ ++.|+++++++.++ ++.+++ |
T Consensus 13 ~~~g~~~~~p~f~--l~d~~G~~--v~l~~~-~Gk~vlv~F~-at~C~~vC~~~-~~~l~~l~~~~~~~~~~~v~vv~-I 84 (200)
T 2b7k_A 13 RGYGKPSLGGPFH--LEDMYGNE--FTEKNL-LGKFSIIYFG-FSNCPDICPDE-LDKLGLWLNTLSSKYGITLQPLF-I 84 (200)
T ss_dssp ---CCCCCCCCCE--EEETTSCE--EEGGGG-TTSCEEEEEE-CTTCCSHHHHH-HHHHHHHHHHHHHHHCCCCEEEE-E
T ss_pred hccCCCCcCCCEE--EEcCCCCE--EeHHHc-CCCEEEEEEE-CCCCcchhHHH-HHHHHHHHHHHHHhhCCceEEEE-E
Confidence 4678886 9999 46889987 999999 7999988888 899997 9998 99999999999854 899999 8
Q ss_pred ecC----CHHHHHHHHHHhCCCCceEEEEeC---cchHHHHhCCccccCC-----CCCCCCcceeEEEEEecCCcEEEEE
Q 045485 78 SVN----DAFVMKAWKENLGINDEVLLLSDG---NGVFTKAIGCELDLSD-----KPMGLGVRSRRYALLAENGVVKVLN 145 (164)
Q Consensus 78 s~d----~~~~~~~~~~~~~~~~~~~~l~D~---~~~~~~~~gv~~~~~~-----~~~~~~~~~p~~~lid~~G~I~~~~ 145 (164)
+.| +++.+++|+++++.+ |+++.+. ...++++||+...... .... ..+.|++||||++|+|++.+
T Consensus 85 s~D~~~d~~~~~~~~~~~~~~~--~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~-~~~~~~~~liD~~G~i~~~~ 161 (200)
T 2b7k_A 85 TCDPARDSPAVLKEYLSDFHPS--ILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYL-VDHSIFFYLMDPEGQFVDAL 161 (200)
T ss_dssp ESCTTTCCHHHHHHHHTTSCTT--CEEEECCHHHHHHHHHHTTC--------------C-TTTCCCEEEECTTSCEEEEE
T ss_pred ECCCCCCCHHHHHHHHHHcCCC--ceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCce-eeecceEEEECCCCcEEEEe
Confidence 887 789999999999988 9888753 4788999999732110 0000 11346799999999999988
Q ss_pred ee
Q 045485 146 LE 147 (164)
Q Consensus 146 ~~ 147 (164)
.+
T Consensus 162 ~g 163 (200)
T 2b7k_A 162 GR 163 (200)
T ss_dssp CT
T ss_pred CC
Confidence 75
No 97
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.91 E-value=3.1e-24 Score=147.32 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=108.7
Q ss_pred CCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHH
Q 045485 6 VGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFV 84 (164)
Q Consensus 6 ~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~ 84 (164)
+|.++|+|++ .+.+|+. ++++++ +|+++||+|| ++|||.|..+ ++.++++++++. ++.+++ |+.| +.+.
T Consensus 1 ~~~~~p~~~~--~~~~g~~--~~l~~~-~~k~~ll~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~~~~~-v~~~~~~~~ 70 (136)
T 1zzo_A 1 TVPAQLQFSA--KTLDGHD--FHGESL-LGKPAVLWFW-APWCPTCQGE-APVVGQVAASHP--EVTFVG-VAGLDQVPA 70 (136)
T ss_dssp CCCGGGCCEE--EBTTSCE--EEGGGG-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EECSSCHHH
T ss_pred CCCCCCCccc--ccCCCCE--eeHHHh-CCCeEEEEEE-cCCChhHHHH-HHHHHHHHHHcC--CeEEEE-EeCCCCHHH
Confidence 4788999994 5788987 999999 7999999998 9999999997 999999999886 899999 6665 5899
Q ss_pred HHHHHHHhCC-CCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 85 MKAWKENLGI-NDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 85 ~~~~~~~~~~-~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+++|++++++ + |+++.|.+..+++.||+. ++ |++++||++|+|+ .+.+. .+.+++++.|+
T Consensus 71 ~~~~~~~~~~~~--~~~~~d~~~~~~~~~~i~----------~~--P~~~~id~~g~i~-~~~g~---~~~~~l~~~l~ 131 (136)
T 1zzo_A 71 MQEFVNKYPVKT--FTQLADTDGSVWANFGVT----------QQ--PAYAFVDPHGNVD-VVRGR---MSQDELTRRVT 131 (136)
T ss_dssp HHHHHHHTTCTT--SEEEECTTCHHHHHTTCC----------SS--SEEEEECTTCCEE-EEESC---CCHHHHHHHHH
T ss_pred HHHHHHHcCCCc--eEEEEcCCcHHHHHcCCC----------CC--ceEEEECCCCCEE-EEecC---CCHHHHHHHHH
Confidence 9999999999 7 999999999999999996 34 5699999999999 66642 33444455544
No 98
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.91 E-value=3.8e-24 Score=153.06 Aligned_cols=120 Identities=23% Similarity=0.403 Sum_probs=102.8
Q ss_pred CCCCCCCCCCeeeeeecC--CCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe-c
Q 045485 3 AISVGDKLPDATLSYFDS--AGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS-V 79 (164)
Q Consensus 3 ~l~~G~~~P~f~l~~~~~--~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is-~ 79 (164)
.+.+|+++|+|++ .+. +|+. ++++++.+||++||+|| ++|||+|..+ +|.+++++++ ++.+++ |+ .
T Consensus 21 ~~~~G~~~P~f~l--~~~~~~g~~--~~~~~~~~gk~vll~F~-a~~C~~C~~~-~~~l~~l~~~----~v~vv~-v~~~ 89 (168)
T 2b1k_A 21 SALIGKPVPKFRL--ESLDNPGQF--YQADVLTQGKPVLLNVW-ATWCPTCRAE-HQYLNQLSAQ----GIRVVG-MNYK 89 (168)
T ss_dssp CTTTTSBCCCCEE--EESSSTTCE--EEGGGGCCSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHT----TCCEEE-EEES
T ss_pred ccccCCcCCCeEe--ecccCCCcE--eehhHhcCCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHC----CCEEEE-EECC
Confidence 4689999999995 566 7877 89888647898988888 9999999997 9999887654 899999 66 4
Q ss_pred CCHHHHHHHHHHhCCCCceE-EEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 80 NDAFVMKAWKENLGINDEVL-LLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
++++.+++|+++++++ |+ ++.|.+..+++.||+. ++ |++||||++|+|++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g 144 (168)
T 2b1k_A 90 DDRQKAISWLKELGNP--YALSLFDGDGMLGLDLGVY----------GA--PETFLIDGNGIIRYRHAG 144 (168)
T ss_dssp CCHHHHHHHHHHHCCC--CSEEEEETTCHHHHHHTCC----------SS--SEEEEECTTSBEEEEEES
T ss_pred CChHHHHHHHHHcCCC--CceeeECcchHHHHHcCcc----------cc--CEEEEECCCCeEEEEEeC
Confidence 6788999999999999 87 6789999999999997 34 569999999999999885
No 99
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.91 E-value=3.9e-24 Score=150.67 Aligned_cols=122 Identities=16% Similarity=0.218 Sum_probs=100.6
Q ss_pred CCCCCCCCCCCeeeeeecCCC--------ceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcE
Q 045485 2 AAISVGDKLPDATLSYFDSAG--------ELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDI 73 (164)
Q Consensus 2 ~~l~~G~~~P~f~l~~~~~~g--------~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~v 73 (164)
..+.+|+++|+|++ .+.+| +. ++++++ +|+++||+|| ++|||.|..+ ++.+++++++ .++.+
T Consensus 6 ~~~~~g~~~p~f~l--~~~~g~~~~~~~~~~--~~l~~~-~gk~~ll~f~-~~~C~~C~~~-~~~l~~l~~~---~~v~~ 75 (156)
T 1kng_A 6 PSALIGRPAPQTAL--PPLEGLQADNVQVPG--LDPAAF-KGKVSLVNVW-ASWCVPCHDE-APLLTELGKD---KRFQL 75 (156)
T ss_dssp ------CBCCCCCB--CCCTTCEETTEECCC--BCGGGG-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHTTC---TTSEE
T ss_pred hhHHhCCCCCCcee--eeccCcccccccCce--echHHh-CCCEEEEEEE-cccCHhHHHH-HHHHHHHHhc---CCeEE
Confidence 35789999999995 57787 66 999999 7999988888 8999999997 9999988765 45999
Q ss_pred EEEEe-cCCHHHHHHHHHHhCCCCceE-EEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 74 VACIS-VNDAFVMKAWKENLGINDEVL-LLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 74 i~~is-~d~~~~~~~~~~~~~~~~~~~-~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
++ |+ .++++.+++|+++++++ |+ ++.|.+..+++.|++. ++ |++|+||++|+|++.+.+.
T Consensus 76 v~-v~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~----------~~--P~~~~id~~G~i~~~~~g~ 137 (156)
T 1kng_A 76 VG-INYKDAADNARRFLGRYGNP--FGRVGVDANGRASIEWGVY----------GV--PETFVVGREGTIVYKLVGP 137 (156)
T ss_dssp EE-EEESCCHHHHHHHHHHHCCC--CSEEEEETTSHHHHHTTCC----------SS--CEEEEECTTSBEEEEEESC
T ss_pred EE-EECCCCHHHHHHHHHHcCCC--CceeeeCchhHHHHhcCcC----------cc--CeEEEEcCCCCEEEEEeCC
Confidence 99 66 46789999999999999 88 8899999999999997 34 5699999999999988753
No 100
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=99.90 E-value=8.5e-23 Score=149.67 Aligned_cols=159 Identities=36% Similarity=0.584 Sum_probs=128.7
Q ss_pred CCCCCCCCCCC--CeeeeeecCC---------Cceeeeehhhhc-CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHH-H
Q 045485 1 SAAISVGDKLP--DATLSYFDSA---------GELQTITVSDLT-SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL-K 67 (164)
Q Consensus 1 ~~~l~~G~~~P--~f~l~~~~~~---------g~~~~~~l~d~~-~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~-~ 67 (164)
+|...+|+++| |++|.++..+ |.++++++++.. +||+|||+++|+.+.|.|..+|+|.|.+.++++ +
T Consensus 23 ~~~~~v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k 102 (199)
T 4h86_A 23 SMSDLVNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVK 102 (199)
T ss_dssp CBCTTTTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHH
T ss_pred hhHHHhCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHH
Confidence 46788999999 5666554322 555679998875 589999999999999999988999999999876 7
Q ss_pred hCCCcEEEEEecCCHHHHHHHHHHhCCCC--ceEEEEeCcchHHHHhCCccccCCCCCCCCc-ceeEEEEEecCCcEEEE
Q 045485 68 SKGVDIVACISVNDAFVMKAWKENLGIND--EVLLLSDGNGVFTKAIGCELDLSDKPMGLGV-RSRRYALLAENGVVKVL 144 (164)
Q Consensus 68 ~~~v~vi~~is~d~~~~~~~~~~~~~~~~--~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~-~~p~~~lid~~G~I~~~ 144 (164)
++|+..|.|+|.|+++.+++|.+.++... .+.+++|++++++++||+...... + +. ..|-.+||| ||+|.+.
T Consensus 103 ~kGvd~I~ciSVND~FVm~AW~k~~~~~~~~~i~~laD~~~eftkalGl~~~~~~---g-g~RS~Rya~IVd-DGvV~~~ 177 (199)
T 4h86_A 103 EKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGD---G-VYWSGRWAMVVE-NGIVTYA 177 (199)
T ss_dssp HSCCCEEEEEESSCHHHHHHHHHHTTCCCCSSEEEEECGGGHHHHHTTCEEEEET---T-EEEECSEEEEEE-TTEEEEE
T ss_pred hcCCcEEEEEEcCCHHHHHHHHHHhcccccccccccCCcchHHHHhcCceeecCC---C-cceeeEEEEEEE-CCEEEEE
Confidence 89998777799999999999999987642 499999999999999998754221 1 22 235578888 9999999
Q ss_pred EeecC--CceeecCHHHHHhhC
Q 045485 145 NLEEG--GAFTFSGAEDMLKAL 164 (164)
Q Consensus 145 ~~~~~--~~~~~~~~~~~l~~l 164 (164)
++.++ ..++..++|.+|++|
T Consensus 178 ~vE~~pg~~~~vS~ae~vL~~L 199 (199)
T 4h86_A 178 AKETNPGTDVTVSSVESVLAHL 199 (199)
T ss_dssp EECSSTTTCCSTTSHHHHHTTC
T ss_pred EEeCCCCCCCcccCHHHHHhcC
Confidence 99854 357788999999986
No 101
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.89 E-value=1.1e-23 Score=147.04 Aligned_cols=121 Identities=12% Similarity=0.218 Sum_probs=102.3
Q ss_pred CCCCCCC-eeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh-CCCcEEEEEecC-CH
Q 045485 6 VGDKLPD-ATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS-KGVDIVACISVN-DA 82 (164)
Q Consensus 6 ~G~~~P~-f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-~~v~vi~~is~d-~~ 82 (164)
+|+.+|+ |++ .+.+|+. ++++++ +||++||+|| ++|||+|+.+ +|.|+++++++.+ .++.+++ |+.| +.
T Consensus 3 ~~~~~P~~f~l--~~~~g~~--~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~~~vv~-v~~d~~~ 74 (144)
T 1i5g_A 3 LKKFFPYSTNV--LKGAAAD--IALPSL-AGKTVFFYFS-ASWCPPSRAF-TPQLIDFYKAHAEKKNFEVML-ISWDESA 74 (144)
T ss_dssp TTTSCSSCSEE--EETTEEE--EEGGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTEEEEE-EECCSSH
T ss_pred hhhhCCCceEE--EcCCCCE--ecHHHc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhccCCCEEEEE-EeCCCCH
Confidence 5789999 994 5788887 999999 7998888888 8999999997 9999999999985 6899999 8887 68
Q ss_pred HHHHHHHHHhCCCCceEEEE-eCcchHHHHhCCccccCCCCCCCCcceeEEEEEe-cCCcEEEEEee
Q 045485 83 FVMKAWKENLGINDEVLLLS-DGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLA-ENGVVKVLNLE 147 (164)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid-~~G~I~~~~~~ 147 (164)
+.+++|++++++. .++++. |.+..++++|++. ++ |+++||| ++|+|++.+..
T Consensus 75 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~~G~i~~~~~~ 128 (144)
T 1i5g_A 75 EDFKDYYAKMPWL-ALPFEDRKGMEFLTTGFDVK----------SI--PTLVGVEADSGNIITTQAR 128 (144)
T ss_dssp HHHHHHHTTCSSE-ECCTTCHHHHHHHHHHTTCC----------SS--SEEEEEETTTCCEEESCHH
T ss_pred HHHHHHHHhCCcc-ccccCchHHHHHHHHHcCCC----------CC--CEEEEEECCCCcEEeccch
Confidence 8899999998753 366665 6678999999996 34 5699999 99999887753
No 102
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.88 E-value=8e-24 Score=150.39 Aligned_cols=125 Identities=12% Similarity=0.223 Sum_probs=103.8
Q ss_pred eecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec------CCHHHHHHHHH
Q 045485 17 YFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV------NDAFVMKAWKE 90 (164)
Q Consensus 17 ~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~------d~~~~~~~~~~ 90 (164)
+.+.+|+. ++++++ +|+++||+|| ++|||+|+.+ +|.|++++++++.+++.+|+ |+. ++.+++++|.+
T Consensus 23 l~~~~g~~--~~~~~~-~gk~vlv~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~vv~-v~~~~~~~~~~~~~~~~~~~ 96 (164)
T 2h30_A 23 MKTADNRP--ASVYLK-KDKPTLIKFW-ASWCPLCLSE-LGQAEKWAQDAKFSSANLIT-VASPGFLHEKKDGEFQKWYA 96 (164)
T ss_dssp CEETTSSB--GGGGCC-TTSCEEEEEC-CTTCHHHHHH-HHHHHHHHTCGGGTTSEEEE-EECTTSTTCCCTTHHHHHHT
T ss_pred cCCCCCCE--eeHHHh-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHcccCCcEEEE-EEcCCCccccCHHHHHHHHH
Confidence 45778987 999999 7999998888 9999999998 99999999999889999999 775 35677888888
Q ss_pred HhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 91 NLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 91 ~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+++++ .+++..|.+..++++|++. ++ |++||||++|+|++.+.+. .+.+++++.|+.
T Consensus 97 ~~~~~-~~~~~~d~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~g~---~~~~~l~~~i~~ 153 (164)
T 2h30_A 97 GLNYP-KLPVVTDNGGTIAQNLNIS----------VY--PSWALIGKDGDVQRIVKGS---INEAQALALIRN 153 (164)
T ss_dssp TSCCT-TSCEEECTTCHHHHHTTCC----------SS--SEEEEECTTSCEEEEEESC---CCHHHHHHHHHC
T ss_pred hCCCC-cceEEEcCchHHHHHcCCC----------cc--ceEEEECCCCcEEEEEcCC---CCHHHHHHHHHH
Confidence 87775 4789999999999999997 34 5699999999999988752 334455555544
No 103
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.87 E-value=5.4e-23 Score=143.99 Aligned_cols=121 Identities=14% Similarity=0.219 Sum_probs=101.7
Q ss_pred CCCCCCCC-eeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh-CCCcEEEEEecC-C
Q 045485 5 SVGDKLPD-ATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS-KGVDIVACISVN-D 81 (164)
Q Consensus 5 ~~G~~~P~-f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-~~v~vi~~is~d-~ 81 (164)
.+|+.+|+ |++ .+.+| . ++++++ +||++||+|| ++|||+|+.+ +|.|+++++++.+ .++.+++ |+.| +
T Consensus 3 ~~~~~~P~~f~l--~~~~g-~--~~l~~~-~gk~vll~F~-a~wC~~C~~~-~p~l~~l~~~~~~~~~~~vv~-v~~d~~ 73 (146)
T 1o8x_A 3 GLDKYLPGIEKL--RRGDG-E--VEVKSL-AGKLVFFYFS-ASWCPPARGF-TPQLIEFYDKFHESKNFEVVF-CTWDEE 73 (146)
T ss_dssp CGGGTSTTCCEE--EETTE-E--EEGGGG-TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTEEEEE-EECCCS
T ss_pred chHhhCCCceEE--EcCCC-C--CcHHHh-CCCEEEEEEE-ccCCHHHHHH-HHHHHHHHHHhhhcCCeEEEE-EeCCCC
Confidence 46889999 894 57888 7 999999 7998888888 8999999997 9999999999983 6899999 7777 6
Q ss_pred HHHHHHHHHHhCCCCceEEEE-eCcchHHHHhCCccccCCCCCCCCcceeEEEEEe-cCCcEEEEEee
Q 045485 82 AFVMKAWKENLGINDEVLLLS-DGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLA-ENGVVKVLNLE 147 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid-~~G~I~~~~~~ 147 (164)
.+.+++|++++++. .++++. |.+..++++|++. ++ |+++||| ++|+|++.+..
T Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~----------~~--Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 74 EDGFAGYFAKMPWL-AVPFAQSEAVQKLSKHFNVE----------SI--PTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HHHHHHHHTTCSSE-ECCGGGHHHHHHHHHHTTCC----------SS--SEEEEEETTTCCEEESCHH
T ss_pred HHHHHHHHHHCCce-eeccchhhHHHHHHHHhCCC----------CC--CEEEEEECCCCeEEEecch
Confidence 78899999988753 366665 6678999999996 34 5699999 99999987754
No 104
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.86 E-value=1.8e-22 Score=140.64 Aligned_cols=121 Identities=16% Similarity=0.279 Sum_probs=100.1
Q ss_pred CCCCCCCCe-eeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHH-hCCCcEEEEEecC-C
Q 045485 5 SVGDKLPDA-TLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELK-SKGVDIVACISVN-D 81 (164)
Q Consensus 5 ~~G~~~P~f-~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~-~~~v~vi~~is~d-~ 81 (164)
.+|+.+|+| + +.+.+| . ++++++ +||++||+|| ++|||.|+.+ +|.|++++++++ +.++.+++ |+.| +
T Consensus 3 ~~g~~~p~~~~--l~~~~g-~--~~l~~~-~gk~vll~F~-a~wC~~C~~~-~~~l~~l~~~~~~~~~~~vv~-i~~d~~ 73 (144)
T 1o73_A 3 GLAKYLPGATN--LLSKSG-E--VSLGSL-VGKTVFLYFS-ASWCPPCRGF-TPVLAEFYEKHHVAKNFEVVL-ISWDEN 73 (144)
T ss_dssp GGGGTSCTTCC--BBCTTS-C--BCSGGG-TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTEEEEE-EECCSS
T ss_pred chhhhCccceE--eecCCC-c--CcHHHh-CCCEEEEEEE-CcCCHHHHHH-HHHHHHHHHHhccCCCEEEEE-EeCCCC
Confidence 578999997 8 568888 7 999999 7998888888 8999999997 999999999998 46899999 7777 5
Q ss_pred HHHHHHHHHHhCCCCceEEEE-eCcchHHHHhCCccccCCCCCCCCcceeEEEEEe-cCCcEEEEEee
Q 045485 82 AFVMKAWKENLGINDEVLLLS-DGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLA-ENGVVKVLNLE 147 (164)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid-~~G~I~~~~~~ 147 (164)
.+++++|++++++. .+++.. |.+..+++.|++. ++ |+++||| ++|+|++.+..
T Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~----------~~--Pt~~lid~~~G~i~~~~~~ 128 (144)
T 1o73_A 74 ESDFHDYYGKMPWL-ALPFDQRSTVSELGKTFGVE----------SI--PTLITINADTGAIIGTQAR 128 (144)
T ss_dssp HHHHHHHHTTCSSE-ECCTTCHHHHHHHHHHHTCC----------SS--SEEEEEETTTCCEEESCHH
T ss_pred HHHHHHHHHhCCce-EeeccchhHHHHHHHHcCCC----------CC--CEEEEEECCCCeEEecchh
Confidence 77889999887743 255554 5568899999996 34 5699999 89999887643
No 105
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.86 E-value=3.9e-23 Score=148.27 Aligned_cols=123 Identities=17% Similarity=0.220 Sum_probs=100.7
Q ss_pred CCCCCCCCCCe-eeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh-CCCcEEEEEecC
Q 045485 3 AISVGDKLPDA-TLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS-KGVDIVACISVN 80 (164)
Q Consensus 3 ~l~~G~~~P~f-~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-~~v~vi~~is~d 80 (164)
...+|+++|+| + +.+.+| . ++|+++ +||++||+|| ++|||+|+.+ +|.|+++++++++ +++.+|+ |+.|
T Consensus 21 ~~~vG~~~P~f~~--l~~~~g-~--v~l~~~-~gk~vll~F~-a~wC~~C~~~-~p~l~~l~~~~~~~~~v~vv~-v~~d 91 (165)
T 3s9f_A 21 MSGVAKHLGEALK--LRKQAD-T--ADMDSL-SGKTVFFYFS-ASWCPPCRGF-TPQLVEFYEKHHDSKNFEIIL-ASWD 91 (165)
T ss_dssp -CHHHHHHHHTSC--EEETTE-E--ECSGGG-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTEEEEE-EECC
T ss_pred hhhhcccCCccee--eecCCC-c--ccHHHc-CCCEEEEEEE-CCcChhHHHH-HHHHHHHHHHhccCCCeEEEE-EecC
Confidence 35688999998 7 457788 6 999999 7998888888 9999999998 9999999999986 6899999 7766
Q ss_pred -CHHHHHHHHHHhCCCCceEEEEeCc-chHHHHhCCccccCCCCCCCCcceeEEEEEecC-CcEEEEEee
Q 045485 81 -DAFVMKAWKENLGINDEVLLLSDGN-GVFTKAIGCELDLSDKPMGLGVRSRRYALLAEN-GVVKVLNLE 147 (164)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~l~D~~-~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~-G~I~~~~~~ 147 (164)
+.+.+++|++++++. .+++..+.. ..++++|++. ++ |++||||++ |+|++....
T Consensus 92 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~----------~~--Pt~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 92 EEEDDFNAYYAKMPWL-SIPFANRNIVEALTKKYSVE----------SI--PTLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp CSHHHHHHHHTTCSSE-ECCTTCHHHHHHHHHHTTCC----------SS--SEEEEEETTTCCEEESCHH
T ss_pred CCHHHHHHHHHhCCCc-ccccCchhHHHHHHHHcCCC----------CC--CEEEEEeCCCCEEEecccH
Confidence 568889999988753 356555443 7999999997 34 569999998 999887653
No 106
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.75 E-value=7.2e-23 Score=142.20 Aligned_cols=120 Identities=15% Similarity=0.186 Sum_probs=98.1
Q ss_pred CCCCCeeeeeecCCCceeeeehhh-hcCCC-cEEEEEecCCCCcCCCcCchhhHHHhHHHHH--hCCCcEEEEEecC-CH
Q 045485 8 DKLPDATLSYFDSAGELQTITVSD-LTSNK-KAILFAVPGAFTPTCSQKHLPGFVEKSAELK--SKGVDIVACISVN-DA 82 (164)
Q Consensus 8 ~~~P~f~l~~~~~~g~~~~~~l~d-~~~g~-~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~--~~~v~vi~~is~d-~~ 82 (164)
+.+|+|++ .+.+|+. +++++ + +|| ++||+|| ++|||+|+.+ +|.+++++++++ ..++.+++ |+.| ++
T Consensus 2 ~~~p~~~l--~~~~g~~--~~l~~~~-~gk~~vll~F~-a~wC~~C~~~-~~~l~~~~~~~~~~~~~~~v~~-v~~d~~~ 73 (143)
T 2lus_A 2 EFIQGIKL--VKKNRCE--VNANEAL-KDKDIIGFYFS-AHWCPPCRGF-TPILADMYSELVDDSAPFEIIF-VSSDRSE 73 (143)
Confidence 35799984 5778987 99999 7 788 8888887 8999999998 999999999995 35899999 7776 56
Q ss_pred HHHHHHHHHhCCCC-ceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 83 FVMKAWKENLGIND-EVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+.+++|+++++++- .+++..|.+..+++.|++. ++ |+++|||++|+|++.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----------~~--P~~~lid~~G~i~~~~~~ 127 (143)
T 2lus_A 74 DDMFQYMMESHGDWLAIPYRSGPASNVTAKYGIT----------GI--PALVIVKKDGTLISMNGR 127 (143)
Confidence 78899999998871 2445556678899999986 34 569999999999998654
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.53 E-value=6.9e-16 Score=106.58 Aligned_cols=117 Identities=9% Similarity=0.012 Sum_probs=78.1
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecC
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d 80 (164)
+..|..+|+|.. +.+.++.. ..+++. +|+++||+|| ++||++|+.. .+.+ .++.+++. ++.++. +..+
T Consensus 4 ~~~~~~~~~f~~-~~~~~~~~--~~l~~~-~~k~vlv~F~-a~wC~~C~~~-~~~~~~~~~l~~~~~--~~~~~~-vd~~ 74 (134)
T 2fwh_A 4 TAQTQTHLNFTQ-IKTVDELN--QALVEA-KGKPVMLDLY-ADWCVACKEF-EKYTFSDPQVQKALA--DTVLLQ-ANVT 74 (134)
T ss_dssp ------CCCCEE-CCSHHHHH--HHHHHH-TTSCEEEEEE-CTTCHHHHHH-HHHTTTSHHHHHHTT--TSEEEE-EECT
T ss_pred ccccccCCCcEE-ecCHHHHH--HHHHHh-cCCcEEEEEE-CCCCHHHHHH-HHHhcCCHHHHHHhc--CcEEEE-EeCC
Confidence 567888999873 23334433 677888 6898988888 9999999987 7887 77877774 588888 6665
Q ss_pred CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEE--EEEeecCCceeecCHH
Q 045485 81 DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVK--VLNLEEGGAFTFSGAE 158 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~--~~~~~~~~~~~~~~~~ 158 (164)
.. .|.+..++++||+. ++ |+++++|++|+++ ....+ ..+.++++
T Consensus 75 ~~-------------------~~~~~~l~~~~~v~----------~~--Pt~~~~d~~G~~v~~~~~~G---~~~~~~l~ 120 (134)
T 2fwh_A 75 AN-------------------DAQDVALLKHLNVL----------GL--PTILFFDGQGQEHPQARVTG---FMDAETFS 120 (134)
T ss_dssp TC-------------------CHHHHHHHHHTTCC----------SS--SEEEEECTTSCBCGGGCBCS---CCCHHHHH
T ss_pred CC-------------------cchHHHHHHHcCCC----------CC--CEEEEECCCCCEeeeeeeee---ccCHHHHH
Confidence 32 13346678888886 34 5599999999997 45553 34455556
Q ss_pred HHHhh
Q 045485 159 DMLKA 163 (164)
Q Consensus 159 ~~l~~ 163 (164)
+.|+.
T Consensus 121 ~~l~~ 125 (134)
T 2fwh_A 121 AHLRD 125 (134)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65553
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.51 E-value=7.4e-15 Score=99.92 Aligned_cols=110 Identities=11% Similarity=0.038 Sum_probs=76.2
Q ss_pred CCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHH
Q 045485 8 DKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKA 87 (164)
Q Consensus 8 ~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~ 87 (164)
+.+++++. .+.+|.. ...... ++++++|+|| ++|||.|... .|.+.++++++. .++.++. |..+
T Consensus 4 ~~~~~l~~--~~~~~~~--~~~~~~-~~k~~lv~f~-a~wC~~C~~~-~~~l~~~~~~~~-~~v~~~~-v~~~------- 67 (126)
T 2l57_A 4 EGIKQINF--QSINVVE--NLEEAK-EGIPTIIMFK-TDTCPYCVEM-QKELSYVSKERE-GKFNIYY-ARLE------- 67 (126)
T ss_dssp CCSSCTTT--TCCSEES--STTTCC-SSSCEEEEEE-CSSCHHHHHH-HHHHHHHHHHSS-SSCEEEE-EETT-------
T ss_pred cccCCCCc--cccchhH--HHHHHh-CCCcEEEEEE-CCCCccHHHH-HHHHHHHHHHhc-CCeEEEE-EeCC-------
Confidence 34556552 2334432 223334 6788888887 9999999997 999999998886 6788888 7744
Q ss_pred HHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 88 WKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 88 ~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
.|.+..++++|++. ++ |+++++|++|+++..+.+ ..+.+++.+.|+
T Consensus 68 --------------~d~~~~~~~~~~v~----------~~--Pt~~~~~~~G~~~~~~~G---~~~~~~l~~~l~ 113 (126)
T 2l57_A 68 --------------EEKNIDLAYKYDAN----------IV--PTTVFLDKEGNKFYVHQG---LMRKNNIETILN 113 (126)
T ss_dssp --------------SSHHHHHHHHTTCC----------SS--SEEEEECTTCCEEEEEES---CCCHHHHHHHHH
T ss_pred --------------CCchHHHHHHcCCc----------ce--eEEEEECCCCCEEEEecC---CCCHHHHHHHHH
Confidence 13345678889886 34 559999999999988775 233444555554
No 109
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.47 E-value=3.1e-15 Score=105.80 Aligned_cols=93 Identities=11% Similarity=0.022 Sum_probs=69.7
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEe
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSD 103 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (164)
+++++. +||+++|+||.++|||+|+.+ .|.+ .++.+.+ ..++.++. +..+... +++ +++ .|
T Consensus 40 ~~~a~~-~gk~vlv~F~ga~wC~~C~~~-~p~l~~~~~~~~~~-~~~~~~v~-vd~~~~~---------~~~--~~~-~~ 103 (154)
T 2ju5_A 40 LEHSKQ-DHKPIGLFFTGSDWCMWCIKM-QDQILQSSEFKHFA-GVHLHMVE-VDFPQKN---------HQP--EEQ-RQ 103 (154)
T ss_dssp HHHHHH-HCCCEEEEEECTTTCHHHHHH-HHHTTTSHHHHHHH-HHHCEEEE-EECCSSC---------CCC--HHH-HH
T ss_pred HHHHHh-CCCeEEEEEeCCCCCHhHHHH-HHHHhcCHHHHHHh-cCcEEEEE-ecCcccc---------CCC--hhh-Hh
Confidence 788888 689888888768999999997 9999 5664444 34677777 6655422 345 432 46
Q ss_pred CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 104 GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 104 ~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
.+..+++.|++. ++ |+++++|++|+++... +.
T Consensus 104 ~~~~l~~~~~v~----------~~--Pt~~~~d~~G~~~~~~-G~ 135 (154)
T 2ju5_A 104 KNQELKAQYKVT----------GF--PELVFIDAEGKQLARM-GF 135 (154)
T ss_dssp HHHHHHHHTTCC----------SS--SEEEEECTTCCEEEEE-CC
T ss_pred hHHHHHHHcCCC----------CC--CEEEEEcCCCCEEEEe-cC
Confidence 678899999997 44 5599999999999887 63
No 110
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.39 E-value=7e-13 Score=91.61 Aligned_cols=98 Identities=15% Similarity=0.200 Sum_probs=70.1
Q ss_pred CCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceE
Q 045485 20 SAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVL 99 (164)
Q Consensus 20 ~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~ 99 (164)
.+|.. .+++++ +++++||+|| ++|||+|... .|.+.++.+++.+ .+.++. |..|.
T Consensus 39 ~~~~~--~~l~~~-~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~-~~~~~~-v~~~~------------------ 93 (141)
T 3hxs_A 39 YENHS--KEWKYL-GDKPAIVDFY-ADWCGPCKMV-APILEELSKEYAG-KIYIYK-VNVDK------------------ 93 (141)
T ss_dssp CSSCC--CCCCCC-CSSCEEEEEE-CTTCTTHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT------------------
T ss_pred cccch--hHHHHh-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-ceEEEE-EECCC------------------
Confidence 34444 666666 6888888888 9999999997 9999999998863 466666 55432
Q ss_pred EEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 100 LLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 100 ~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+..++++|++. ++ |+++++|++|+++ ...+ ..+.+.+.+.|+.
T Consensus 94 -----~~~~~~~~~v~----------~~--Pt~~~~~~~g~~~-~~~G---~~~~~~l~~~l~~ 136 (141)
T 3hxs_A 94 -----EPELARDFGIQ----------SI--PTIWFVPMKGEPQ-VNMG---ALSKEQLKGYIDK 136 (141)
T ss_dssp -----CHHHHHHTTCC----------SS--SEEEEECSSSCCE-EEES---CCCHHHHHHHHHH
T ss_pred -----CHHHHHHcCCC----------Cc--CEEEEEeCCCCEE-EEeC---CCCHHHHHHHHHH
Confidence 34678888886 34 5599999999987 4443 3344455555543
No 111
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.38 E-value=4.4e-13 Score=91.52 Aligned_cols=107 Identities=11% Similarity=0.220 Sum_probs=72.2
Q ss_pred CCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHH
Q 045485 6 VGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVM 85 (164)
Q Consensus 6 ~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~ 85 (164)
...++|+++ +.+++. ++.... ++++++|.|| ++||+.|+.. .|.+.++++++. .++.++. |..|
T Consensus 20 ~~~~~~~~~----~~~~~~--~~~~~~-~~k~vlv~F~-a~wC~~C~~~-~p~l~~~~~~~~-~~v~~~~-vd~d----- 83 (128)
T 3ul3_B 20 MFKKVPRLQ----QNGSNI--INGVNM-KNTVIVLYFF-AKWCQACTMQ-STEMDKLQKYYG-KRIYLLK-VDLD----- 83 (128)
T ss_dssp ------CCC----CCCCSS--SSBTTS-CCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHG-GGEEEEE-EEGG-----
T ss_pred HhccCCccc----cCCccH--HHHHHc-cCCEEEEEEE-CCCCHHHHHH-hHHHHHHHHHhc-CCeEEEE-EECC-----
Confidence 345667766 224554 676667 6888888888 9999999998 999999999986 3566666 5432
Q ss_pred HHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 86 KAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 86 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
.+..++++|++. ++ |+++++ ++|+++....+ ..+.+++.+.|+
T Consensus 84 ------------------~~~~l~~~~~v~----------~~--Pt~~~~-~~G~~~~~~~G---~~~~~~l~~~l~ 126 (128)
T 3ul3_B 84 ------------------KNESLARKFSVK----------SL--PTIILL-KNKTMLARKDH---FVSSNDLIALIK 126 (128)
T ss_dssp ------------------GCHHHHHHTTCC----------SS--SEEEEE-ETTEEEEEESS---CCCHHHHHHHHT
T ss_pred ------------------CCHHHHHHcCCC----------Cc--CEEEEE-ECCEEEEEecC---CCCHHHHHHHHH
Confidence 234678889986 44 558888 79999887764 344545555554
No 112
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.37 E-value=2e-13 Score=93.54 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=70.3
Q ss_pred ehhhhcCCCcEEEEEecCCCCcCCCcCchhhHH--HhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCc
Q 045485 28 TVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFV--EKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGN 105 (164)
Q Consensus 28 ~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~--~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~ 105 (164)
..+.. ++++++|+|| ++||++|... .|.|. ++.+++.+ ++.++. |..+. .|.+
T Consensus 23 ~~~~~-~~k~vlv~f~-a~wC~~C~~~-~~~l~~~~~~~~~~~-~~~~~~-vd~~~--------------------~~~~ 77 (133)
T 3fk8_A 23 AAGKR-THKPTLLVFG-ANWCTDCRAL-DKSLRNQKNTALIAK-HFEVVK-IDVGN--------------------FDRN 77 (133)
T ss_dssp HHHHH-HTCCEEEEEE-CTTCHHHHHH-HHHHTSHHHHHHHHH-HCEEEE-EECTT--------------------TTSS
T ss_pred HHHHh-cCCcEEEEEc-CCCCHHHHHH-HHHhCCHHHHHHhcC-CEEEEE-EeCCc--------------------ccch
Confidence 33334 4888888888 9999999997 99999 88888863 577788 66653 1445
Q ss_pred chHHHHhCC---ccccCCCCCCCCcceeEEEEEecCCcEEEEEeecC----CceeecCHHHHHhh
Q 045485 106 GVFTKAIGC---ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG----GAFTFSGAEDMLKA 163 (164)
Q Consensus 106 ~~~~~~~gv---~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~----~~~~~~~~~~~l~~ 163 (164)
..++++|++ . ++ |+++++|++|++++...+.. ...+...+++.|+.
T Consensus 78 ~~l~~~~~v~~~~----------~~--Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 78 LELSQAYGDPIQD----------GI--PAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp HHHHHHTTCGGGG----------CS--SEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred HHHHHHhCCccCC----------cc--ceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 667888888 5 34 55999999999999887611 02334455555543
No 113
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.31 E-value=9.8e-13 Score=89.57 Aligned_cols=95 Identities=7% Similarity=0.055 Sum_probs=64.4
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEe
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSD 103 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (164)
+.+++. +++++||+|| ++|||.|... .+.+ .++.+.+. .++.++. +..+. |
T Consensus 20 ~~~~~~-~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~-~~~~~~~-vd~~~---------------------~ 73 (130)
T 2kuc_A 20 LKRAEV-EDKLLFVDCF-TTWCGPCKRL-SKVVFKDSLVADYFN-RHFVNLK-MDMEK---------------------G 73 (130)
T ss_dssp HHHHHH-HSSCEEEEEC-CTTCTHHHHH-HHHGGGCHHHHHHHH-HHSEEEE-ECSSS---------------------T
T ss_pred HHHHHh-cCCeEEEEEE-CCCCccHHHH-HHHhcCcHHHHHHHh-cCeEEEE-EecCC---------------------c
Confidence 666666 5888888888 9999999997 8887 44444333 3454555 44443 2
Q ss_pred CcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 104 GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 104 ~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
.+..++++|++. ++ |+++++|++|+++....+. .+.+.+.+.|+
T Consensus 74 ~~~~~~~~~~v~----------~~--Pt~~~~d~~G~~~~~~~G~---~~~~~l~~~l~ 117 (130)
T 2kuc_A 74 EGVELRKKYGVH----------AY--PTLLFINSSGEVVYRLVGA---EDAPELLKKVK 117 (130)
T ss_dssp THHHHHHHTTCC----------SS--CEEEEECTTSCEEEEEESC---CCHHHHHHHHH
T ss_pred chHHHHHHcCCC----------CC--CEEEEECCCCcEEEEecCC---CCHHHHHHHHH
Confidence 356788889986 34 5599999999999887753 23334444443
No 114
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.31 E-value=8.4e-12 Score=83.04 Aligned_cols=86 Identities=15% Similarity=0.157 Sum_probs=64.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++++++.+ ++.++. +..|. +..++++|+
T Consensus 16 ~~~~~lv~f~-a~wC~~C~~~-~~~l~~~~~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~ 68 (112)
T 2voc_A 16 SEGVVLADFW-APWCGPSKMI-APVLEELDQEMGD-KLKIVK-IDVDE-----------------------NQETAGKYG 68 (112)
T ss_dssp SSSEEEEEEE-CTTBGGGGGH-HHHHHHHHHHHTT-TCEEEE-EETTT-----------------------CCSHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhCC-CcEEEE-EECCC-----------------------CHHHHHHcC
Confidence 5777888887 8999999997 9999999998863 577777 66542 346888999
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+++.+.++
T Consensus 69 v~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~ 101 (112)
T 2voc_A 69 VM----------SI--PTLLVL-KDGEVVETSVGF---KPKEALQELVN 101 (112)
T ss_dssp CC----------SB--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred CC----------cc--cEEEEE-eCCEEEEEEeCC---CCHHHHHHHHH
Confidence 87 34 558888 999998887752 33445555554
No 115
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.25 E-value=9.3e-12 Score=82.46 Aligned_cols=85 Identities=13% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|+.. .|.++++++++. ++.++. +..+. .+..++++|+
T Consensus 23 ~~~~vlv~f~-a~wC~~C~~~-~~~l~~~~~~~~--~v~~~~-vd~~~----------------------~~~~~~~~~~ 75 (111)
T 2pu9_C 23 GDKPVVLDMF-TQWCGPSKAM-APKYEKLAEEYL--DVIFLK-LDCNQ----------------------ENKTLAKELG 75 (111)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EECSS----------------------TTHHHHHHHC
T ss_pred CCCEEEEEEE-CCcCHhHHHH-CHHHHHHHHHCC--CeEEEE-EecCc----------------------chHHHHHHcC
Confidence 4778888888 8999999997 999999988874 577777 66552 2457888899
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| + ++++++|+++....+. ..+++++.|+
T Consensus 76 v~----------~~P--t-~~~~~~G~~~~~~~G~----~~~~l~~~l~ 107 (111)
T 2pu9_C 76 IR----------VVP--T-FKILKENSVVGEVTGA----KYDKLLEAIQ 107 (111)
T ss_dssp CS----------BSS--E-EEEESSSSEEEEEESS----CHHHHHHHHH
T ss_pred CC----------eee--E-EEEEeCCcEEEEEcCC----CHHHHHHHHH
Confidence 86 344 4 7888999998877753 1334455444
No 116
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.25 E-value=6.3e-13 Score=95.05 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=60.8
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecCCHHHHHHH--HHHhCCCCceEEE
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVNDAFVMKAW--KENLGINDEVLLL 101 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d~~~~~~~~--~~~~~~~~~~~~l 101 (164)
+.++.. +||+++|+|| ++||++|+.. .+.+ .++.+.+.+ ++.++. |+.|....+... ....+....+..+
T Consensus 40 ~~~a~~-~gk~vlv~F~-A~WC~~C~~~-~~~~~~~~~~~~~~~~-~~~~v~-v~~d~~~~~~~~~~~~~~~~~~~~~~~ 114 (172)
T 3f9u_A 40 MEYARQ-HNKPVMLDFT-GYGCVNCRKM-ELAVWTDPKVSSIINN-DYVLIT-LYVDNKTPLTEPVKIMENGTERTLRTV 114 (172)
T ss_dssp HHHHHH-TTCCEEEEEE-CTTCHHHHHH-HHHTTTSHHHHHHHHH-HCEEEE-EETTCCCEEEEEEEEEETTEEEEEEEH
T ss_pred HHHHHH-cCCeEEEEEE-CCCCHHHHHH-HHHhcCCHHHHHHhcC-CEEEEE-EecCcccccchhhhhhhcchhhhhhhh
Confidence 344455 6899988888 9999999974 2333 444444443 688888 777653211000 0000000002222
Q ss_pred EeCcchH-HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 102 SDGNGVF-TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 102 ~D~~~~~-~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
.|..+.+ ++.|++. ++ |++++||++|+++....+
T Consensus 115 ~~~~~~~~~~~~~v~----------~~--Pt~~lid~~G~~~~~~~G 149 (172)
T 3f9u_A 115 GDKWSYLQRVKFGAN----------AQ--PFYVLIDNEGNPLNKSYA 149 (172)
T ss_dssp HHHHHHHHHHHHSCC----------CS--SEEEEECTTSCBSSCCBC
T ss_pred hhhhhHHHHHHcCCC----------Cc--ceEEEECCCCCEEeeccC
Confidence 2222223 5889987 44 559999999999888774
No 117
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.22 E-value=9.8e-12 Score=83.44 Aligned_cols=87 Identities=10% Similarity=0.081 Sum_probs=62.8
Q ss_pred hhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHH
Q 045485 30 SDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFT 109 (164)
Q Consensus 30 ~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (164)
++. +++++||+|| ++||++|+.. .|.+.++++++. ++.++. |..|. +..++
T Consensus 27 ~~~-~~k~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~--~v~~~~-vd~d~-----------------------~~~l~ 77 (116)
T 3qfa_C 27 DAA-GDKLVVVDFS-ATWCGPSKMI-KPFFHSLSEKYS--NVIFLE-VDVDD-----------------------CQDVA 77 (116)
T ss_dssp HHH-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHTTCT--TSEEEE-EETTT-----------------------THHHH
T ss_pred Hhc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCC--CCEEEE-EECCC-----------------------CHHHH
Confidence 344 5788888888 9999999997 999999988874 477777 65542 35678
Q ss_pred HHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 110 KAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
++|++. ++| +++++ ++|+++....+. ..+.+++.|+
T Consensus 78 ~~~~v~----------~~P--t~~~~-~~G~~~~~~~G~----~~~~l~~~l~ 113 (116)
T 3qfa_C 78 SECEVK----------SMP--TFQFF-KKGQKVGEFSGA----NKEKLEATIN 113 (116)
T ss_dssp HHTTCC----------SSS--EEEEE-SSSSEEEEEESC----CHHHHHHHHH
T ss_pred HHcCCc----------ccc--EEEEE-eCCeEEEEEcCC----CHHHHHHHHH
Confidence 888887 454 46565 899998887742 3445555554
No 118
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.22 E-value=2e-11 Score=79.78 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=62.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.++++.+++.+ .+.++. +..|. +..++++||
T Consensus 16 ~~~~~~v~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~v~~~~-v~~~~-----------------------~~~~~~~~~ 68 (105)
T 1nsw_A 16 GDGPVLVDFW-AAWCGPCRMM-APVLEEFAEAHAD-KVTVAK-LNVDE-----------------------NPETTSQFG 68 (105)
T ss_dssp SSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHSTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-CcEEEE-EECcC-----------------------CHHHHHHcC
Confidence 4677888777 9999999997 9999999888753 377666 55432 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |+++++ ++|+++..+.+. .+.+++.+.|+.
T Consensus 69 v~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~~ 102 (105)
T 1nsw_A 69 IM----------SI--PTLILF-KGGRPVKQLIGY---QPKEQLEAQLAD 102 (105)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHTTT
T ss_pred Cc----------cc--cEEEEE-eCCeEEEEEecC---CCHHHHHHHHHH
Confidence 86 34 558888 899998877742 333444554443
No 119
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.21 E-value=1e-11 Score=84.95 Aligned_cols=86 Identities=13% Similarity=0.213 Sum_probs=61.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||+.|... .|.++++++++.+ ++.++. +..|. +..++++|+
T Consensus 39 ~~k~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~ 91 (128)
T 2o8v_B 39 ADGAILVDFW-AEWCGPAKMI-APILDEIADEYQG-KLTVAK-LNIDQ-----------------------NPGTAPKYG 91 (128)
T ss_dssp CSSEEEEEEE-CSSCHHHHHT-HHHHHHHHHHTTT-TEEEEE-EETTT-----------------------CCTTSGGGT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcC-CeEEEE-EECCC-----------------------CHHHHHHcC
Confidence 4677777777 9999999997 9999999988853 466666 55442 235677888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++....+. .+.+.+.+.|+
T Consensus 92 v~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~ 124 (128)
T 2o8v_B 92 IR----------GI--PTLLLF-KNGEVAATKVGA---LSKGQLKEFLD 124 (128)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred CC----------cc--CEEEEE-eCCEEEEEEcCC---CCHHHHHHHHH
Confidence 86 34 558888 999998877742 33444444444
No 120
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.20 E-value=2.2e-11 Score=84.92 Aligned_cols=109 Identities=16% Similarity=0.198 Sum_probs=72.0
Q ss_pred CCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHH
Q 045485 6 VGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVM 85 (164)
Q Consensus 6 ~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~ 85 (164)
.|.++++..+ .+.+++. +...-. ++++++|+|| ++||+.|... .|.++++.+++.. .+.++. |..|
T Consensus 31 ~~~~~~~~~v--~~l~~~~--~~~~~~-~~k~vlv~F~-a~wC~~C~~~-~p~l~~~~~~~~~-~~~~~~-vd~~----- 96 (148)
T 3p2a_A 31 CGHSLFDGEV--INATAET--LDKLLQ-DDLPMVIDFW-APWCGPCRSF-APIFAETAAERAG-KVRFVK-VNTE----- 96 (148)
T ss_dssp TCCBTTCCCC--EECCTTT--HHHHTT-CSSCEEEEEE-CSSCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETT-----
T ss_pred cCCccccCCc--eecCHHH--HHHHHh-cCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHcCC-ceEEEE-EECc-----
Confidence 3555666653 3444543 443333 5778888888 9999999997 9999999988863 476666 5554
Q ss_pred HHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 86 KAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 86 ~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
.+..++++|++. ++| +++++ ++|+++..+.+ ..+.+.+.+.|+
T Consensus 97 ------------------~~~~l~~~~~v~----------~~P--t~~~~-~~G~~~~~~~G---~~~~~~l~~~l~ 139 (148)
T 3p2a_A 97 ------------------AEPALSTRFRIR----------SIP--TIMLY-RNGKMIDMLNG---AVPKAPFDNWLD 139 (148)
T ss_dssp ------------------TCHHHHHHTTCC----------SSS--EEEEE-ETTEEEEEESS---CCCHHHHHHHHH
T ss_pred ------------------CCHHHHHHCCCC----------ccC--EEEEE-ECCeEEEEEeC---CCCHHHHHHHHH
Confidence 234678888886 454 46666 79999887764 233444444443
No 121
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.20 E-value=1.3e-11 Score=85.08 Aligned_cols=86 Identities=14% Similarity=0.206 Sum_probs=61.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++||+.|... .|.+.++++++.+ ++.++. +..|. +..++++|+
T Consensus 37 ~~k~~lv~f~-a~wC~~C~~~-~~~l~~l~~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~ 89 (136)
T 2l5l_A 37 GDKPAIVDFY-ADWCGPCKMV-APILDELAKEYDG-QIVIYK-VDTEK-----------------------EQELAGAFG 89 (136)
T ss_dssp CSSCEEEEEE-CTTSHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHhcC-CEEEEE-EeCCC-----------------------CHHHHHHcC
Confidence 3577888887 9999999997 9999999888863 477666 55542 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++|++|+++ .+.+ ..+.+.+++.|+
T Consensus 90 v~----------~~--Pt~~~~~~~G~~~-~~~G---~~~~~~l~~~l~ 122 (136)
T 2l5l_A 90 IR----------SI--PSILFIPMEGKPE-MAQG---AMPKASFKKAID 122 (136)
T ss_dssp CC----------SS--CEEEEECSSSCCE-EEES---CCCHHHHHHHHH
T ss_pred CC----------CC--CEEEEECCCCcEE-EEeC---CCCHHHHHHHHH
Confidence 86 34 5599999999987 4443 334444555544
No 122
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.18 E-value=3.3e-11 Score=79.89 Aligned_cols=85 Identities=13% Similarity=0.145 Sum_probs=62.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||+.|+.. .|.+.++.+++ .++.++. +..| .+..++++|+
T Consensus 23 ~~k~vlv~f~-a~wC~~C~~~-~p~l~~l~~~~--~~~~~~~-vd~~-----------------------~~~~l~~~~~ 74 (109)
T 3f3q_A 23 QDKLVVVDFY-ATWCGPCKMI-APMIEKFSEQY--PQADFYK-LDVD-----------------------ELGDVAQKNE 74 (109)
T ss_dssp SSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTSEEEE-EETT-----------------------TCHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHHH-HHHHHHHHHHC--CCCEEEE-EECC-----------------------CCHHHHHHcC
Confidence 4677888887 9999999997 99999999887 4576666 5543 2456788888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |++++++ +|+++....+. ..+.+++.|+.
T Consensus 75 v~----------~~--Pt~~~~~-~G~~~~~~~G~----~~~~l~~~i~~ 107 (109)
T 3f3q_A 75 VS----------AM--PTLLLFK-NGKEVAKVVGA----NPAAIKQAIAA 107 (109)
T ss_dssp CC----------SS--SEEEEEE-TTEEEEEEESS----CHHHHHHHHHH
T ss_pred CC----------cc--CEEEEEE-CCEEEEEEeCC----CHHHHHHHHHh
Confidence 87 45 4477776 99998888753 23455555543
No 123
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.18 E-value=3.8e-11 Score=79.48 Aligned_cols=75 Identities=15% Similarity=0.253 Sum_probs=55.8
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+++++|+|| ++|||.|... .|.+.++.++++..++.++. +..+. +..++++|++
T Consensus 21 ~~~~~v~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~~-vd~~~-----------------------~~~~~~~~~v 74 (112)
T 3d6i_A 21 DKLIVLYFH-TSWAEPCKAL-KQVFEAISNEPSNSNVSFLS-IDADE-----------------------NSEISELFEI 74 (112)
T ss_dssp TCCEEEEEE-CCC--CHHHH-HHHHHHHHHCGGGTTSEEEE-EETTT-----------------------CHHHHHHTTC
T ss_pred CCEEEEEEE-CCCCHHHHHH-HHHHHHHHHhcCCCCEEEEE-Eeccc-----------------------CHHHHHHcCC
Confidence 678888887 9999999997 99999998887556788777 66653 2467888888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
. ++| +++++ ++|+++..+.+.
T Consensus 75 ~----------~~P--t~~~~-~~G~~~~~~~G~ 95 (112)
T 3d6i_A 75 S----------AVP--YFIII-HKGTILKELSGA 95 (112)
T ss_dssp C----------SSS--EEEEE-ETTEEEEEECSC
T ss_pred C----------ccc--EEEEE-ECCEEEEEecCC
Confidence 6 454 46655 799998887753
No 124
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.18 E-value=4.6e-11 Score=77.96 Aligned_cols=87 Identities=13% Similarity=0.124 Sum_probs=62.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++.++ +.++. +..| .+..++++|+
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~~-~~~~~-v~~~-----------------------~~~~~~~~~~ 70 (106)
T 3die_A 18 ESGVQLVDFW-ATACGPCKMI-APVLEELAADYEGK-ADILK-LDVD-----------------------ENPSTAAKYE 70 (106)
T ss_dssp CSSEEEEEEE-CSBCHHHHHH-HHHHHHHHHHTTTT-CEEEE-EETT-----------------------TCHHHHHHTT
T ss_pred cCCcEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcCC-cEEEE-EECC-----------------------cCHHHHHhCC
Confidence 5778888887 9999999997 99999999988643 76666 5553 2345778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |+++++ ++|+++....+ ..+.+++.+.|+.
T Consensus 71 v~----------~~--Pt~~~~-~~G~~~~~~~g---~~~~~~l~~~l~~ 104 (106)
T 3die_A 71 VM----------SI--PTLIVF-KDGQPVDKVVG---FQPKENLAEVLDK 104 (106)
T ss_dssp CC----------SB--SEEEEE-ETTEEEEEEES---CCCHHHHHHHHHT
T ss_pred Cc----------cc--CEEEEE-eCCeEEEEEeC---CCCHHHHHHHHHH
Confidence 86 44 447777 59999887774 2334555555554
No 125
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.18 E-value=5.5e-11 Score=78.72 Aligned_cols=86 Identities=12% Similarity=0.167 Sum_probs=62.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++.+ .+.++. +..+. +..++++|+
T Consensus 24 ~~~~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~v~~~~-v~~~~-----------------------~~~~~~~~~ 76 (115)
T 1thx_A 24 AEQPVLVYFW-ASWCGPCQLM-SPLINLAANTYSD-RLKVVK-LEIDP-----------------------NPTTVKKYK 76 (115)
T ss_dssp CSSCEEEEEE-CTTCTTHHHH-HHHHHHHHHHTTT-TCEEEE-EESTT-----------------------CHHHHHHTT
T ss_pred CCceEEEEEE-CCCCHHHHHh-HHHHHHHHHHhCC-cEEEEE-EEcCC-----------------------CHHHHHHcC
Confidence 4677888887 8999999997 9999999888864 377777 66543 245778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+++.+.|+
T Consensus 77 v~----------~~--Pt~~~~-~~G~~~~~~~g~---~~~~~l~~~l~ 109 (115)
T 1thx_A 77 VE----------GV--PALRLV-KGEQILDSTEGV---ISKDKLLSFLD 109 (115)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred CC----------ce--eEEEEE-cCCEEEEEecCC---CCHHHHHHHHH
Confidence 86 34 558888 999998877742 33444444444
No 126
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.17 E-value=3.9e-11 Score=80.96 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=62.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||+|+.. .|.++++.+++. ++.++. +..+. .+..++++|+
T Consensus 36 ~~~~~vv~f~-a~wC~~C~~~-~~~l~~~~~~~~--~~~~~~-vd~~~----------------------~~~~~~~~~~ 88 (124)
T 1faa_A 36 GDKPVVLDMF-TQWCGPCKAM-APKYEKLAEEYL--DVIFLK-LDCNQ----------------------ENKTLAKELG 88 (124)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EECSS----------------------TTHHHHHHHC
T ss_pred CCCEEEEEEE-CCcCHhHHHH-hHHHHHHHHHCC--CCEEEE-EecCc----------------------chHHHHHHcC
Confidence 5788888888 9999999997 999999988874 677777 55542 1356788899
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| + +++.++|+++....+.. .+++.+.|+
T Consensus 89 v~----------~~P--t-~~~~~~G~~~~~~~G~~----~~~l~~~i~ 120 (124)
T 1faa_A 89 IR----------VVP--T-FKILKENSVVGEVTGAK----YDKLLEAIQ 120 (124)
T ss_dssp CS----------SSS--E-EEEEETTEEEEEEESSC----HHHHHHHHH
T ss_pred CC----------eee--E-EEEEeCCcEEEEEcCCC----HHHHHHHHH
Confidence 86 454 3 77789999988877531 334454444
No 127
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.17 E-value=3.6e-11 Score=80.83 Aligned_cols=86 Identities=15% Similarity=0.118 Sum_probs=62.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.++++||+|| ++|||.|... .+.++++.+++.. ++.++. +..|. +..++++|+
T Consensus 30 ~~k~vlv~f~-a~~C~~C~~~-~~~l~~~~~~~~~-~v~~~~-vd~d~-----------------------~~~l~~~~~ 82 (119)
T 1w4v_A 30 SETPVVVDFH-AQWCGPCKIL-GPRLEKMVAKQHG-KVVMAK-VDIDD-----------------------HTDLAIEYE 82 (119)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-SSEEEE-EETTT-----------------------THHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-CeEEEE-EeCCC-----------------------CHHHHHHcC
Confidence 4677888887 9999999997 9999999888753 577777 66542 346788888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+.+.+.|+
T Consensus 83 v~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~ 115 (119)
T 1w4v_A 83 VS----------AV--PTVLAM-KNGDVVDKFVGI---KDEDQLEAFLK 115 (119)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred CC----------cc--cEEEEE-eCCcEEEEEcCC---CCHHHHHHHHH
Confidence 86 44 457777 899998877742 33444555544
No 128
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.17 E-value=4.3e-11 Score=78.44 Aligned_cols=86 Identities=10% Similarity=0.108 Sum_probs=60.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++.+ .+.++. +..+. +..++++||
T Consensus 18 ~~~~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 70 (107)
T 1dby_A 18 SSVPVLVDFW-APWCGPCRII-APVVDEIAGEYKD-KLKCVK-LNTDE-----------------------SPNVASEYG 70 (107)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT-----------------------CHHHHHHHT
T ss_pred CCCcEEEEEE-CCCCHhHHHH-HHHHHHHHHHhCC-ceEEEE-EECCC-----------------------CHHHHHHCC
Confidence 4677888887 9999999997 9999999888753 477777 55442 346788888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| ++++ .++|+++..+.+. .+.+++.+.|+
T Consensus 71 v~----------~~P--t~~~-~~~G~~~~~~~G~---~~~~~l~~~l~ 103 (107)
T 1dby_A 71 IR----------SIP--TIMV-FKGGKKCETIIGA---VPKATIVQTVE 103 (107)
T ss_dssp CC----------SSC--EEEE-ESSSSEEEEEESC---CCHHHHHHHHH
T ss_pred CC----------cCC--EEEE-EeCCEEEEEEeCC---CCHHHHHHHHH
Confidence 86 444 4554 4899998887753 33444555554
No 129
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.17 E-value=3.6e-11 Score=79.52 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=55.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++.+ .+.++. +..|. +..++++|+
T Consensus 22 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 74 (112)
T 1t00_A 22 NDKPVLVDFW-AAWCGPCRQI-APSLEAIAAEYGD-KIEIVK-LNIDE-----------------------NPGTAAKYG 74 (112)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHhHHhc-CHHHHHHHHHhcC-CeEEEE-EEcCC-----------------------CHHHHHhCC
Confidence 4677888887 9999999997 9999999888853 477777 65543 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++| ++ ++.++|+++..+.+
T Consensus 75 v~----------~~P--t~-~~~~~G~~~~~~~G 95 (112)
T 1t00_A 75 VM----------SIP--TL-NVYQGGEVAKTIVG 95 (112)
T ss_dssp CC----------SSS--EE-EEEETTEEEEEEES
T ss_pred CC----------ccc--EE-EEEeCCEEEEEEeC
Confidence 86 454 34 45589999887775
No 130
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.17 E-value=1.1e-11 Score=84.34 Aligned_cols=84 Identities=8% Similarity=0.115 Sum_probs=59.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++|||.|... .|.++++.+++. ++.++. +..| .+..++++|+
T Consensus 37 ~~k~vvv~f~-a~wC~~C~~~-~~~l~~l~~~~~--~v~~~~-vd~d-----------------------~~~~l~~~~~ 88 (124)
T 1xfl_A 37 SKTLVVVDFT-ASWCGPCRFI-APFFADLAKKLP--NVLFLK-VDTD-----------------------ELKSVASDWA 88 (124)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCS--SEEEEE-EETT-----------------------TSHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCC--CcEEEE-EECc-----------------------cCHHHHHHcC
Confidence 4777887777 8999999997 999999988874 676666 5553 2356788899
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| + +++.++|+++....+. ..+.+++.|+
T Consensus 89 v~----------~~P--t-~~~~~~G~~~~~~~G~----~~~~l~~~l~ 120 (124)
T 1xfl_A 89 IQ----------AMP--T-FMFLKEGKILDKVVGA----KKDELQSTIA 120 (124)
T ss_dssp CC----------SSS--E-EEEEETTEEEEEEESC----CHHHHHHHHH
T ss_pred CC----------ccC--E-EEEEECCEEEEEEeCC----CHHHHHHHHH
Confidence 86 455 3 5555999998887742 2334454444
No 131
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.17 E-value=2e-11 Score=84.10 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=57.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++||+.|... .|.++++.+++ .++.++. +..|. +..++++||
T Consensus 45 ~~k~vvv~f~-a~wC~~C~~~-~~~l~~l~~~~--~~v~~~~-v~~~~-----------------------~~~~~~~~~ 96 (139)
T 3d22_A 45 DGKIVLANFS-ARWCGPSRQI-APYYIELSENY--PSLMFLV-IDVDE-----------------------LSDFSASWE 96 (139)
T ss_dssp HTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTSEEEE-EETTT-----------------------SHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHC--CCCEEEE-EeCcc-----------------------cHHHHHHcC
Confidence 4788888888 8999999997 99999998887 4688777 66642 356788888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |+++++ ++|+++..+.+
T Consensus 97 v~----------~~--Pt~~~~-~~G~~~~~~~G 117 (139)
T 3d22_A 97 IK----------AT--PTFFFL-RDGQQVDKLVG 117 (139)
T ss_dssp CC----------EE--SEEEEE-ETTEEEEEEES
T ss_pred CC----------cc--cEEEEE-cCCeEEEEEeC
Confidence 86 34 446555 99999988875
No 132
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.16 E-value=7.1e-11 Score=77.19 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=63.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .+.+.++.+++.+ ++.++. +..+. +..++++|+
T Consensus 19 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 71 (107)
T 2i4a_A 19 ASGLVLVDFW-AEWCGPCKMI-GPALGEIGKEFAG-KVTVAK-VNIDD-----------------------NPETPNAYQ 71 (107)
T ss_dssp CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-SEEEEE-EETTT-----------------------CCHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhHHHH-hHHHHHHHHHhCC-cEEEEE-EECCC-----------------------CHHHHHhcC
Confidence 4677777777 9999999997 9999999988863 566666 55442 346788899
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |+++++ ++|+++..+.+ ..+.+.+.+.|+.
T Consensus 72 v~----------~~--Pt~~~~-~~G~~~~~~~G---~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 72 VR----------SI--PTLMLV-RDGKVIDKKVG---ALPKSQLKAWVES 105 (107)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEES---CCCHHHHHHHHHH
T ss_pred CC----------cc--CEEEEE-eCCEEEEEecC---CCCHHHHHHHHHh
Confidence 86 34 558888 99999887774 2334455555543
No 133
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.15 E-value=2.6e-11 Score=83.41 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=54.7
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchH
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVF 108 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (164)
+++. +|+++||+|| ++||++|... .|.++++.+++ ++.++. +..+ .+..+
T Consensus 35 l~~~-~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~---~v~~~~-vd~~-----------------------~~~~l 84 (133)
T 3cxg_A 35 FSST-QNSSIVIKFG-AVWCKPCNKI-KEYFKNQLNYY---YVTLVD-IDVD-----------------------IHPKL 84 (133)
T ss_dssp HTC--CCSEEEEEEE-CTTCHHHHHT-HHHHHGGGGTE---ECEEEE-EETT-----------------------TCHHH
T ss_pred HHhc-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHhc---CEEEEE-Eecc-----------------------chHHH
Confidence 3444 4677888887 9999999997 89998887655 466565 4433 23568
Q ss_pred HHHhCCccccCCCCCCCCcceeEEEEE-ecCCc--EEEEEee
Q 045485 109 TKAIGCELDLSDKPMGLGVRSRRYALL-AENGV--VKVLNLE 147 (164)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~p~~~li-d~~G~--I~~~~~~ 147 (164)
+++|++. ++ |+++++ +++|+ ++....+
T Consensus 85 ~~~~~v~----------~~--Pt~~~~~~~~g~g~~~~~~~G 114 (133)
T 3cxg_A 85 NDQHNIK----------AL--PTFEFYFNLNNEWVLVHTVEG 114 (133)
T ss_dssp HHHTTCC----------SS--SEEEEEEEETTEEEEEEEEES
T ss_pred HHhcCCC----------CC--CEEEEEEecCCCeEEEEEEcC
Confidence 8889986 44 458888 67777 7777764
No 134
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.14 E-value=5.3e-11 Score=78.61 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=61.0
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+++++|+|| ++|||.|... .|.+.++.+++.+ ++.++. +..|. +..++++|++
T Consensus 24 ~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~~~~~-vd~~~-----------------------~~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFT-ATWCGPCKMI-APLFETLSNDYAG-KVIFLK-VDVDA-----------------------VAAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TSEEEE-EETTT-----------------------THHHHHHHTC
T ss_pred CCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHcCC-CeEEEE-EECCc-----------------------hHHHHHHcCC
Confidence 778888887 8999999997 9999999888853 677777 66542 3567788888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
. ++| + +++.++|+++..+.+. +.+.+.+.|+
T Consensus 77 ~----------~~P--t-~~~~~~G~~~~~~~G~----~~~~l~~~l~ 107 (112)
T 1ep7_A 77 T----------AMP--T-FHVYKDGVKADDLVGA----SQDKLKALVA 107 (112)
T ss_dssp C----------BSS--E-EEEEETTEEEEEEESC----CHHHHHHHHH
T ss_pred C----------ccc--E-EEEEECCeEEEEEcCC----CHHHHHHHHH
Confidence 6 444 3 5566899998877742 3344455444
No 135
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.14 E-value=7.2e-11 Score=78.30 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=55.9
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchH
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVF 108 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (164)
+++. +++.+||.|| ++||++|... .|.+.++.+.+ .++.++. |.. |.+..+
T Consensus 15 l~~~-~~k~vvv~F~-a~wC~~C~~~-~p~~~~~~~~~--~~~~~~~-vd~-----------------------d~~~~l 65 (105)
T 3zzx_A 15 LNEA-GNKLVVIDFY-ATWCGPCKMI-APKLEELSQSM--SDVVFLK-VDV-----------------------DECEDI 65 (105)
T ss_dssp HHHT-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTEEEEE-EET-----------------------TTCHHH
T ss_pred HHhc-CCCEEEEEEE-CCCCCCccCC-Ccchhhhhhcc--CCeEEEE-Eec-----------------------ccCHHH
Confidence 3444 5677777787 9999999997 89999988776 3454444 433 234568
Q ss_pred HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 109 TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+++|+|. ++|+ +++-++|+++....|
T Consensus 66 ~~~~~V~----------~~PT---~~~~~~G~~v~~~~G 91 (105)
T 3zzx_A 66 AQDNQIA----------CMPT---FLFMKNGQKLDSLSG 91 (105)
T ss_dssp HHHTTCC----------BSSE---EEEEETTEEEEEEES
T ss_pred HHHcCCC----------eecE---EEEEECCEEEEEEeC
Confidence 8899997 4553 555589999988875
No 136
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.13 E-value=6.1e-11 Score=77.84 Aligned_cols=86 Identities=14% Similarity=0.256 Sum_probs=60.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.++++.+++.. .+.++. +..+. +..++++|+
T Consensus 19 ~~~~~~v~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 71 (108)
T 2trx_A 19 ADGAILVDFW-AEWCGPCKMI-APILDEIADEYQG-KLTVAK-LNIDQ-----------------------NPGTAPKYG 71 (108)
T ss_dssp CSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TEEEEE-EETTT-----------------------CTTHHHHTT
T ss_pred cCCeEEEEEE-CCCCHhHHHH-HHHHHHHHHHhCC-CcEEEE-EECCC-----------------------CHHHHHHcC
Confidence 4677777777 9999999997 8999999888753 466665 54432 345788899
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+.+.+.|+
T Consensus 72 v~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~ 104 (108)
T 2trx_A 72 IR----------GI--PTLLLF-KNGEVAATKVGA---LSKGQLKEFLD 104 (108)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred Cc----------cc--CEEEEE-eCCEEEEEEecC---CCHHHHHHHHH
Confidence 87 44 558888 899998877742 33444455444
No 137
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.12 E-value=5.5e-11 Score=80.21 Aligned_cols=86 Identities=13% Similarity=0.205 Sum_probs=62.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.++++.+++..+++.++. +..|. +..++++|+
T Consensus 32 ~~k~vvv~f~-a~~C~~C~~~-~~~l~~l~~~~~~~~v~~~~-vd~d~-----------------------~~~~~~~~~ 85 (121)
T 2j23_A 32 GDKVVVIDFW-ATWCGPCKMI-GPVFEKISDTPAGDKVGFYK-VDVDE-----------------------QSQIAQEVG 85 (121)
T ss_dssp SSSCEEEEEE-CTTCSTHHHH-HHHHHHHHTSTHHHHSEEEE-EETTT-----------------------CHHHHHHHT
T ss_pred CCCEEEEEEE-CCCCHhHHHH-HHHHHHHHHHCcCCcEEEEE-EECcC-----------------------CHHHHHHcC
Confidence 4677877777 9999999997 99999998888766687777 66543 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| +++++ ++|+++....+. +.+++.+.|+
T Consensus 86 v~----------~~P--t~~~~-~~G~~~~~~~G~----~~~~l~~~l~ 117 (121)
T 2j23_A 86 IR----------AMP--TFVFF-KNGQKIDTVVGA----DPSKLQAAIT 117 (121)
T ss_dssp CC----------SSS--EEEEE-ETTEEEEEEESS----CHHHHHHHHH
T ss_pred CC----------ccc--EEEEE-ECCeEEeeEcCC----CHHHHHHHHH
Confidence 86 444 46555 699998887742 3444555554
No 138
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.12 E-value=2.1e-11 Score=85.69 Aligned_cols=74 Identities=19% Similarity=0.171 Sum_probs=54.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||.|| ++||++|+.+ .|.+.++.+++.++ +.++. |.. |.+..++++|+
T Consensus 22 ~~k~vlv~F~-a~WC~~C~~~-~p~l~~l~~~~~~~-~~~~~-vd~-----------------------d~~~~l~~~~~ 74 (149)
T 3gix_A 22 AEKVLVLRFG-RDEDPVCLQL-DDILSKTSSDLSKM-AAIYL-VDV-----------------------DQTAVYTQYFD 74 (149)
T ss_dssp CSSEEEEEEE-CTTSHHHHHH-HHHHHHHHTTTTTT-EEEEE-EET-----------------------TTCCHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHccCc-eEEEE-EEC-----------------------CcCHHHHHHcC
Confidence 4778888887 9999999998 99999998887532 55555 443 23456888999
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++| +++ ++++|+++....+
T Consensus 75 v~----------~~P--t~~-~~~~G~~v~~~~g 95 (149)
T 3gix_A 75 IS----------YIP--STV-FFFNGQHMKVDYG 95 (149)
T ss_dssp CC----------SSS--EEE-EEETTEEEEEECS
T ss_pred CC----------ccC--eEE-EEECCeEEEeecC
Confidence 87 454 355 8899999855544
No 139
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.11 E-value=1.5e-10 Score=75.48 Aligned_cols=90 Identities=19% Similarity=0.226 Sum_probs=63.2
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchH
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVF 108 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (164)
+++. ++++++|+|| ++|||.|... .|.++++.++++ .++.++. +..+ .+..+
T Consensus 15 l~~~-~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~-~~~~~~~-v~~~-----------------------~~~~~ 66 (106)
T 1xwb_A 15 LTKA-SGKLVVLDFF-ATWCGPCKMI-SPKLVELSTQFA-DNVVVLK-VDVD-----------------------ECEDI 66 (106)
T ss_dssp HHHH-TTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTT-TTEEEEE-EETT-----------------------TCHHH
T ss_pred HHhc-CCCEEEEEEE-CCcCHHHHHh-hHHHHHHHHHhC-CCeEEEE-Eecc-----------------------chHHH
Confidence 3444 5788888887 8999999997 899999988875 4676666 5554 23567
Q ss_pred HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 109 TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+++|++. ++| + +++.++|+++..+.+. ..+.+++.|+.
T Consensus 67 ~~~~~v~----------~~P--t-~~~~~~G~~~~~~~g~----~~~~l~~~i~~ 104 (106)
T 1xwb_A 67 AMEYNIS----------SMP--T-FVFLKNGVKVEEFAGA----NAKRLEDVIKA 104 (106)
T ss_dssp HHHTTCC----------SSS--E-EEEEETTEEEEEEESC----CHHHHHHHHHH
T ss_pred HHHcCCC----------ccc--E-EEEEcCCcEEEEEcCC----CHHHHHHHHHH
Confidence 7888886 444 4 5556899998877742 23445555554
No 140
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.11 E-value=1.1e-10 Score=76.51 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=61.7
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++.+ .+.++. +..| .+..++++|+
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~~~~~-v~~~-----------------------~~~~~~~~~~ 72 (109)
T 3tco_A 20 NNKLVLVDCW-AEWCAPCHLY-EPIYKKVAEKYKG-KAVFGR-LNVD-----------------------ENQKIADKYS 72 (109)
T ss_dssp HSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TSEEEE-EETT-----------------------TCHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHhh-hHHHHHHHHHhCC-CceEEE-Eccc-----------------------cCHHHHHhcC
Confidence 4777888887 9999999997 9999999988863 466665 5443 3456778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+++.+.|+
T Consensus 73 i~----------~~--Pt~~~~-~~g~~~~~~~g~---~~~~~l~~~l~ 105 (109)
T 3tco_A 73 VL----------NI--PTTLIF-VNGQLVDSLVGA---VDEDTLESTVN 105 (109)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred cc----------cC--CEEEEE-cCCcEEEeeecc---CCHHHHHHHHH
Confidence 86 34 558888 999998887752 33444444444
No 141
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.70 E-value=7.6e-12 Score=85.16 Aligned_cols=83 Identities=12% Similarity=0.181 Sum_probs=58.6
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEe
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSD 103 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (164)
++++.. +++++||+|| ++||++|+.. .|.+ .++.+.+. .++.++. +..+..
T Consensus 12 ~~~~~~-~~k~vlv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~-~~~~~~~-vd~~~~--------------------- 65 (130)
T 2lst_A 12 LALAQA-HGRMVMVYFH-SEHCPYCQQM-NTFVLSDPGVSRLLE-ARFVVAS-VSVDTP--------------------- 65 (130)
Confidence 777777 6888888887 9999999997 8888 77766654 2455555 444321
Q ss_pred CcchHHHHhCCccccCCCCCCCCcceeEEEEEec-CCcE--EEEEee
Q 045485 104 GNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAE-NGVV--KVLNLE 147 (164)
Q Consensus 104 ~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~-~G~I--~~~~~~ 147 (164)
.+..+++.|++. ++ |+++++|+ +|++ +....+
T Consensus 66 ~~~~~~~~~~v~----------~~--Pt~~~~d~~~G~~~~~~~~~G 100 (130)
T 2lst_A 66 EGQELARRYRVP----------GT--PTFVFLVPKAGAWEEVGRLFG 100 (130)
Confidence 124567788886 34 55999995 6998 666664
No 142
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.10 E-value=1.5e-10 Score=77.40 Aligned_cols=85 Identities=14% Similarity=0.191 Sum_probs=61.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++|||.|... .|.++++.+++. ++.++. +..|. +..++++|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~-~p~l~~~~~~~~--~v~~~~-vd~~~-----------------------~~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFY-ATWCGPCKMM-QPHLTKLIQAYP--DVRFVK-CDVDE-----------------------SPDIAKECE 80 (114)
T ss_dssp HCSEEEEEEE-CTTCHHHHHT-HHHHHHHHHHCT--TSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCC--CCEEEE-EECCC-----------------------CHHHHHHCC
Confidence 3677777777 9999999998 999999988874 477777 65442 345778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++| ++ ++.++|+++....+. . .+.+++.|+.
T Consensus 81 v~----------~~P--t~-~~~~~G~~~~~~~G~---~-~~~l~~~l~~ 113 (114)
T 2oe3_A 81 VT----------AMP--TF-VLGKDGQLIGKIIGA---N-PTALEKGIKD 113 (114)
T ss_dssp CC----------SBS--EE-EEEETTEEEEEEESS---C-HHHHHHHHHT
T ss_pred CC----------ccc--EE-EEEeCCeEEEEEeCC---C-HHHHHHHHHh
Confidence 86 454 34 556999998877742 2 4556666654
No 143
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.10 E-value=8.7e-11 Score=76.07 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=60.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .+.+.++.+++. ++.++. +..|. +..++++|+
T Consensus 15 ~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~--~~~~~~-v~~~~-----------------------~~~~~~~~~ 66 (104)
T 2e0q_A 15 SHEIAVVDFW-AEWCAPCLIL-APIIEELAEDYP--QVGFGK-LNSDE-----------------------NPDIAARYG 66 (104)
T ss_dssp HSSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred cCCcEEEEEE-CCCChhHHHH-hHHHHHHHHHcC--CceEEE-EECCC-----------------------CHHHHHhCC
Confidence 4677777777 9999999997 899999988875 377777 65542 345778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+++.+.|+
T Consensus 67 v~----------~~--Pt~~~~-~~g~~~~~~~g~---~~~~~l~~~l~ 99 (104)
T 2e0q_A 67 VM----------SL--PTVIFF-KDGEPVDEIIGA---VPREEIEIRIK 99 (104)
T ss_dssp CC----------SS--CEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred cc----------cc--CEEEEE-ECCeEhhhccCC---CCHHHHHHHHH
Confidence 86 34 557777 899998877742 33344444443
No 144
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.10 E-value=1e-10 Score=78.53 Aligned_cols=84 Identities=12% Similarity=0.184 Sum_probs=60.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++. ++.++. +..|. +..++++|+
T Consensus 33 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~~~~~-vd~~~-----------------------~~~~~~~~~ 84 (122)
T 2vlu_A 33 AKKLVVIDFT-ASWCGPCRIM-APVFADLAKKFP--NAVFLK-VDVDE-----------------------LKPIAEQFS 84 (122)
T ss_dssp TTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred cCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHCC--CcEEEE-EECCC-----------------------CHHHHHHcC
Confidence 4678888888 9999999997 999999988874 477777 66543 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| + +++.++|+++..+.+. . .+.+.+.|+
T Consensus 85 v~----------~~P--t-~~~~~~G~~~~~~~G~---~-~~~l~~~l~ 116 (122)
T 2vlu_A 85 VE----------AMP--T-FLFMKEGDVKDRVVGA---I-KEELTAKVG 116 (122)
T ss_dssp CC----------SSS--E-EEEEETTEEEEEEESS---C-HHHHHHHHH
T ss_pred CC----------ccc--E-EEEEeCCEEEEEEeCc---C-HHHHHHHHH
Confidence 86 454 3 5555999998877742 2 444555544
No 145
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.8e-10 Score=79.22 Aligned_cols=81 Identities=10% Similarity=0.135 Sum_probs=54.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||++|+.. .|.++++++++.+.++.++. +..+.. ....+++++. .. .+
T Consensus 25 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~l~~~~~~~~v~~~~-vd~~~~---~~~~~~~~v~--~~------------~~ 84 (137)
T 2dj0_A 25 KRVTWIVEFF-ANWSNDCQSF-APIYADLSLKYNCTGLNFGK-VDVGRY---TDVSTRYKVS--TS------------PL 84 (137)
T ss_dssp TTSCEEEEEC-CTTCSTTTTT-HHHHHHHHHHHCSSSCEEEE-CCTTTC---HHHHHHTTCC--CC------------SS
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhCCCCeEEEE-EeCccC---HHHHHHccCc--cc------------CC
Confidence 3457788887 9999999998 99999999999755777777 555432 1233344433 00 02
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |+++++ ++|+++....+
T Consensus 85 ~~----------~~--Pt~~~~-~~G~~~~~~~G 105 (137)
T 2dj0_A 85 TK----------QL--PTLILF-QGGKEAMRRPQ 105 (137)
T ss_dssp SS----------CS--SEEEEE-SSSSEEEEESC
T ss_pred cC----------CC--CEEEEE-ECCEEEEEecC
Confidence 21 24 557777 89999887775
No 146
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.10 E-value=7.6e-11 Score=77.37 Aligned_cols=86 Identities=12% Similarity=0.058 Sum_probs=53.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||++|... .|.++++.+++ .++.++. +..| .+..++++|+
T Consensus 17 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~--~~~~~~~-vd~~-----------------------~~~~l~~~~~ 68 (105)
T 4euy_A 17 EQQLVLLFIK-TENCGVCDVM-LRKVNYVLENY--NYVEKIE-ILLQ-----------------------DMQEIAGRYA 68 (105)
T ss_dssp CSSEEEEEEE-ESSCHHHHHH-HHHHHHHHHTC--TTEEEEE-EEEC-----------------------CC--------
T ss_pred cCCCEEEEEe-CCCCcchHHH-HHHHHHHHHHc--CCceEEE-EECC-----------------------CCHHHHHhcC
Confidence 4677777777 9999999997 99999998877 3566666 5443 2335667888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |+++++ ++|+++....+ ..+.+.+.+.|+.
T Consensus 69 v~----------~~--Pt~~~~-~~G~~~~~~~g---~~~~~~l~~~l~~ 102 (105)
T 4euy_A 69 VF----------TG--PTVLLF-YNGKEILRESR---FISLENLERTIQL 102 (105)
T ss_dssp -C----------CC--CEEEEE-ETTEEEEEEES---SCCHHHHHHHHHT
T ss_pred CC----------CC--CEEEEE-eCCeEEEEEeC---CcCHHHHHHHHHH
Confidence 86 34 447777 59999887774 3345455555543
No 147
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.09 E-value=1.6e-10 Score=75.25 Aligned_cols=87 Identities=11% Similarity=0.122 Sum_probs=62.7
Q ss_pred hhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHH
Q 045485 30 SDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFT 109 (164)
Q Consensus 30 ~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (164)
++. ++++++|+|| ++|||.|... .|.+.++.+++. ++.++. +..|. +..++
T Consensus 16 ~~~-~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~--~~~~~~-vd~~~-----------------------~~~~~ 66 (105)
T 3m9j_A 16 DAA-GDKLVVVDFS-ATWCGPCKMI-KPFFHSLSEKYS--NVIFLE-VDVDD-----------------------CQDVA 66 (105)
T ss_dssp HHT-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHST--TSEEEE-EETTT-----------------------CHHHH
T ss_pred Hhc-CCCeEEEEEE-CCCChhhHHH-HHHHHHHHHHcc--CeEEEE-EEhhh-----------------------hHHHH
Confidence 344 5788888888 8999999997 999999988874 577777 65442 34577
Q ss_pred HHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 110 KAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
++|++. ++ |+++++ ++|+++..+.+. +.+.+++.|+
T Consensus 67 ~~~~v~----------~~--Pt~~~~-~~g~~~~~~~g~----~~~~l~~~l~ 102 (105)
T 3m9j_A 67 SESEVK----------SM--PTFQFF-KKGQKVGEFSGA----NKEKLEATIN 102 (105)
T ss_dssp HHTTCC----------BS--SEEEEE-ETTEEEEEEESS----CHHHHHHHHH
T ss_pred HHcCCC----------cC--cEEEEE-ECCeEEEEEeCC----CHHHHHHHHH
Confidence 888886 34 457777 889988877742 3445555554
No 148
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.09 E-value=1.1e-10 Score=75.97 Aligned_cols=86 Identities=13% Similarity=0.141 Sum_probs=60.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .|.+.++.+++.+ .+.++. +..+. +..++++|+
T Consensus 17 ~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 69 (105)
T 1fb6_A 17 SEVPVMVDFW-APWCGPCKLI-APVIDELAKEYSG-KIAVYK-LNTDE-----------------------APGIATQYN 69 (105)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCChHHHHH-HHHHHHHHHHhcC-ceEEEE-EcCcc-----------------------hHHHHHhCC
Confidence 4677888887 8999999997 8999999888753 366666 55442 246778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| ++ ++.++|+++....+. .+.+.+.+.|+
T Consensus 70 v~----------~~P--t~-~~~~~g~~~~~~~G~---~~~~~l~~~l~ 102 (105)
T 1fb6_A 70 IR----------SIP--TV-LFFKNGERKESIIGA---VPKSTLTDSIE 102 (105)
T ss_dssp CC----------SSS--EE-EEEETTEEEEEEEEC---CCHHHHHHHHH
T ss_pred CC----------ccc--EE-EEEeCCeEEEEEecC---CCHHHHHHHHH
Confidence 86 444 44 445899998888753 23444555554
No 149
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=78.02 Aligned_cols=75 Identities=17% Similarity=0.243 Sum_probs=55.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh---CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS---KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTK 110 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~---~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (164)
.++++||+|| ++||+.|+.. .|.+.++++++.+ .++.++. +..+. +..+++
T Consensus 24 ~~~~~lv~f~-a~wC~~C~~~-~~~~~~~~~~~~~~~~~~~~~~~-vd~~~-----------------------~~~l~~ 77 (133)
T 1x5d_A 24 SEDVWMVEFY-APWCGHCKNL-EPEWAAAASEVKEQTKGKVKLAA-VDATV-----------------------NQVLAS 77 (133)
T ss_dssp SSSEEEEEEE-CTTCHHHHTH-HHHHHHHHHHHHHHTTTSEEEEE-EETTT-----------------------CCHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHhh-cHHHHHHHHHHHhhcCCcEEEEE-EECCC-----------------------CHHHHH
Confidence 3567777777 9999999997 9999999998873 3466555 54432 357888
Q ss_pred HhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 111 AIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+|++. ++ |+++++++ |+++..+.+
T Consensus 78 ~~~v~----------~~--Pt~~~~~~-g~~~~~~~G 101 (133)
T 1x5d_A 78 RYGIR----------GF--PTIKIFQK-GESPVDYDG 101 (133)
T ss_dssp HHTCC----------SS--SEEEEEET-TEEEEEECS
T ss_pred hCCCC----------ee--CeEEEEeC-CCceEEecC
Confidence 99987 44 55999988 887766664
No 150
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.09 E-value=1.6e-10 Score=76.69 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=61.9
Q ss_pred hhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHH
Q 045485 30 SDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFT 109 (164)
Q Consensus 30 ~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 109 (164)
..+.++++++|+|| ++|||.|... .|.+.++.+++. ++.++. +..+. +..++
T Consensus 14 ~~~~~~~~~vv~f~-a~wC~~C~~~-~~~l~~~~~~~~--~v~~~~-vd~~~-----------------------~~~l~ 65 (110)
T 2l6c_A 14 AHFEGLSDAIVFFH-KNLCPHCKNM-EKVLDKFGARAP--QVAISS-VDSEA-----------------------RPELM 65 (110)
T ss_dssp HHHTTCSEEEEEEE-CSSCSTHHHH-HHHHHHHHTTCT--TSCEEE-EEGGG-----------------------CHHHH
T ss_pred HHHHcCCCEEEEEE-CCCCHhHHHH-HHHHHHHHHHCC--CcEEEE-EcCcC-----------------------CHHHH
Confidence 34435677777777 9999999997 899988877653 576666 54432 35577
Q ss_pred HHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 110 KAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 110 ~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
++|++. ++ |+++++ ++|+++..+.+ ..+.+.+++.|+
T Consensus 66 ~~~~v~----------~~--Pt~~~~-~~G~~v~~~~G---~~~~~~l~~~~~ 102 (110)
T 2l6c_A 66 KELGFE----------RV--PTLVFI-RDGKVAKVFSG---IMNPRELQALYA 102 (110)
T ss_dssp HHTTCC----------SS--CEEEEE-ESSSEEEEEES---CCCHHHHHHHHH
T ss_pred HHcCCc----------cc--CEEEEE-ECCEEEEEEcC---CCCHHHHHHHHH
Confidence 888886 34 558888 99999888875 233445555554
No 151
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.08 E-value=2.9e-11 Score=86.78 Aligned_cols=81 Identities=12% Similarity=0.077 Sum_probs=54.8
Q ss_pred ehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 28 TVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 28 ~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
.++++ +|+++||+|| ++|||+|+.+ +|.|+++++++ .++.++. ++.|.. .+..+++.-
T Consensus 48 ~l~~~-~~k~vvv~F~-A~WC~pC~~~-~P~l~~l~~~~--~~v~~~~-v~~d~~---~~~~~~~~~------------- 105 (167)
T 1z6n_A 48 RLQRI-ERRYRLLVAG-EMWCPDCQIN-LAALDFAQRLQ--PNIELAI-ISKGRA---EDDLRQRLA------------- 105 (167)
T ss_dssp HHHTC-CSCEEEEEEC-CTTCHHHHHH-HHHHHHHHHHC--TTEEEEE-ECHHHH---HHHTTTTTT-------------
T ss_pred HHHHh-CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHC--CCcEEEE-EECCCC---HHHHHHHHH-------------
Confidence 35566 6787788877 9999999998 99999998876 3576666 655432 122222211
Q ss_pred HHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 108 FTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 108 ~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
.++. ++ |+++++|++|+++..+.
T Consensus 106 ----~~v~----------~i--Pt~i~~~~~G~~~~~~g 128 (167)
T 1z6n_A 106 ----LERI----------AI--PLVLVLDEEFNLLGRFV 128 (167)
T ss_dssp ----CSSC----------CS--SEEEEECTTCCEEEEEE
T ss_pred ----cCCC----------Cc--CeEEEECCCCCEEEEEc
Confidence 0233 34 55999999999987664
No 152
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.08 E-value=1.1e-10 Score=80.17 Aligned_cols=73 Identities=15% Similarity=0.277 Sum_probs=52.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKG--VDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
+++++||+|| ++||+.|+.. .|.+.++.+++.+.+ +.++. +..+ .+..++++
T Consensus 33 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~v~~~~-vd~~-----------------------~~~~~~~~ 86 (140)
T 2dj1_A 33 DKDTVLLEFY-APWCGHCKQF-APEYEKIASTLKDNDPPIAVAK-IDAT-----------------------SASMLASK 86 (140)
T ss_dssp TCSEEEEEEC-CTTCHHHHTT-HHHHHHHHHHHHSSSSCCEEEE-ECTT-----------------------TCHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHHhccCCceEEEE-EeCc-----------------------ccHHHHHH
Confidence 4566777776 9999999998 999999999998664 54444 3322 23568888
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
|++. ++ |+++++ ++|+ +..+.
T Consensus 87 ~~v~----------~~--Pt~~~~-~~G~-~~~~~ 107 (140)
T 2dj1_A 87 FDVS----------GY--PTIKIL-KKGQ-AVDYD 107 (140)
T ss_dssp TTCC----------SS--SEEEEE-ETTE-EEECC
T ss_pred CCCC----------cc--CeEEEE-ECCc-EEEcC
Confidence 9986 34 558888 7898 33333
No 153
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.08 E-value=2.2e-10 Score=74.86 Aligned_cols=87 Identities=9% Similarity=0.098 Sum_probs=62.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .+.+.++.+++.+ ++.++. +..+. +..++++|+
T Consensus 17 ~~~~~lv~f~-~~~C~~C~~~-~~~l~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 69 (109)
T 2yzu_A 17 QHPLVLVDFW-AEWCAPCRMI-APILEEIAKEYEG-KLLVAK-LDVDE-----------------------NPKTAMRYR 69 (109)
T ss_dssp HCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTBT-TBEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHhhC-ceEEEE-EECCC-----------------------CHhHHHhCC
Confidence 4677777777 9999999997 8999999888853 477676 55543 345778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |+++++ ++|+++..+.+. .+.+++.+.|+.
T Consensus 70 v~----------~~--Pt~~~~-~~g~~~~~~~g~---~~~~~l~~~l~~ 103 (109)
T 2yzu_A 70 VM----------SI--PTVILF-KDGQPVEVLVGA---QPKRNYQAKIEK 103 (109)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHHT
T ss_pred CC----------cC--CEEEEE-eCCcEeeeEeCC---CCHHHHHHHHHH
Confidence 86 34 558888 899998877742 334445555543
No 154
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.08 E-value=2.2e-10 Score=80.89 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=62.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++||++|... .|.|+++++++.. .+.++. |..|. +..++++|+
T Consensus 63 ~~~~vlv~F~-a~wC~~C~~~-~p~l~~la~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFW-APWCGPCRQM-APQFQAAAATLAG-QVRLAK-IDTQA-----------------------HPAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-TCEEEE-EETTT-----------------------STHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHccC-CEEEEE-EeCCc-----------------------cHHHHHHcC
Confidence 4678888888 9999999997 9999999999864 477777 65542 346888999
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++..+.+. .+.+.+.+.|+
T Consensus 116 i~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~ 148 (155)
T 2ppt_A 116 IQ----------GI--PAFILF-HKGRELARAAGA---RPASELVGFVR 148 (155)
T ss_dssp CC----------SS--SEEEEE-ETTEEEEEEESC---CCHHHHHHHHH
T ss_pred CC----------cC--CEEEEE-eCCeEEEEecCC---CCHHHHHHHHH
Confidence 87 44 447777 799998877742 33444444443
No 155
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.07 E-value=1.1e-10 Score=78.04 Aligned_cols=87 Identities=17% Similarity=0.198 Sum_probs=61.0
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchH
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVF 108 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (164)
+++. ++++++|+|| ++|||.|... .|.++++.+++ ++.++. +..|. +..+
T Consensus 28 l~~~-~~~~~vv~f~-a~wC~~C~~~-~~~~~~~~~~~---~~~~~~-vd~~~-----------------------~~~~ 77 (117)
T 2xc2_A 28 LEQH-KNKLVVVDFF-ATWCGPCKTI-APLFKELSEKY---DAIFVK-VDVDK-----------------------LEET 77 (117)
T ss_dssp HHHT-TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHTTS---SSEEEE-EETTT-----------------------SHHH
T ss_pred HHhC-CCCEEEEEEE-CCCCHhHHHH-hHHHHHHHHHc---CcEEEE-EECCc-----------------------cHHH
Confidence 3444 5788888888 9999999997 89998887765 677777 65542 3567
Q ss_pred HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 109 TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+++|++. ++| + +++.++|+++..+.+. ..+.+++.|+
T Consensus 78 ~~~~~v~----------~~P--t-~~~~~~G~~~~~~~G~----~~~~l~~~l~ 114 (117)
T 2xc2_A 78 ARKYNIS----------AMP--T-FIAIKNGEKVGDVVGA----SIAKVEDMIK 114 (117)
T ss_dssp HHHTTCC----------SSS--E-EEEEETTEEEEEEESS----CHHHHHHHHH
T ss_pred HHHcCCC----------ccc--e-EEEEeCCcEEEEEeCC----CHHHHHHHHH
Confidence 7888886 454 3 5555899998877752 2334555554
No 156
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.07 E-value=2.5e-10 Score=75.75 Aligned_cols=85 Identities=15% Similarity=0.160 Sum_probs=60.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||+.|... .|.+.++.+++. ++.++. +..+. +..++++|+
T Consensus 25 ~~k~vlv~f~-a~~C~~C~~~-~~~l~~l~~~~~--~v~~~~-vd~~~-----------------------~~~~~~~~~ 76 (112)
T 1syr_A 25 QNELVIVDFF-AEWCGPCKRI-APFYEECSKTYT--KMVFIK-VDVDE-----------------------VSEVTEKEN 76 (112)
T ss_dssp HCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EETTT-----------------------THHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHcC--CCEEEE-EECCC-----------------------CHHHHHHcC
Confidence 3677777777 9999999997 999999988874 677777 66543 235778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++| + +++.++|+++....+ . +.+.+++.|+.
T Consensus 77 v~----------~~P--t-~~~~~~G~~~~~~~G---~-~~~~l~~~l~~ 109 (112)
T 1syr_A 77 IT----------SMP--T-FKVYKNGSSVDTLLG---A-NDSALKQLIEK 109 (112)
T ss_dssp CC----------SSS--E-EEEEETTEEEEEEES---C-CHHHHHHHHHT
T ss_pred CC----------ccc--E-EEEEECCcEEEEEeC---C-CHHHHHHHHHH
Confidence 86 454 3 555679999887764 2 34555555554
No 157
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.07 E-value=5.5e-10 Score=85.72 Aligned_cols=74 Identities=11% Similarity=0.136 Sum_probs=57.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||.|| ++||++|+.. .|.+.++.+++.+ .+.++. |..|. +..++++|+
T Consensus 25 ~~~~v~v~f~-a~wC~~C~~~-~p~~~~~~~~~~~-~~~~~~-vd~~~-----------------------~~~~~~~~~ 77 (287)
T 3qou_A 25 MTTPVLFYFW-SERSQHCLQL-TPILESLAAQYNG-QFILAK-LDCDA-----------------------EQMIAAQFG 77 (287)
T ss_dssp TTSCEEEEEE-CTTCTTTTTT-HHHHHHHHHHHTS-SSEEEE-EETTT-----------------------CHHHHHTTT
T ss_pred CCCeEEEEEE-CCCChHHHHH-HHHHHHHHHHcCC-CeEEEE-EeCcc-----------------------CHHHHHHcC
Confidence 3788888888 9999999998 9999999999863 477777 65542 236778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|. ++| +++++ ++|+++..+.+
T Consensus 78 v~----------~~P--t~~~~-~~G~~~~~~~g 98 (287)
T 3qou_A 78 LR----------AIP--TVYLF-QNGQPVDGFQG 98 (287)
T ss_dssp CC----------SSS--EEEEE-ETTEEEEEEES
T ss_pred CC----------CCC--eEEEE-ECCEEEEEeeC
Confidence 87 454 47777 79999887775
No 158
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.06 E-value=2.3e-10 Score=80.36 Aligned_cols=72 Identities=14% Similarity=0.139 Sum_probs=57.1
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
++++||+|| ++||+.|+.. .|.+.++.+++ .++.++. |..+. +..++++|++
T Consensus 32 ~~~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~--~~v~~~~-vd~~~-----------------------~~~l~~~~~v 83 (153)
T 2wz9_A 32 KSLLVVHFW-APWAPQCAQM-NEVMAELAKEL--PQVSFVK-LEAEG-----------------------VPEVSEKYEI 83 (153)
T ss_dssp TSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTSEEEE-EETTT-----------------------SHHHHHHTTC
T ss_pred CCeEEEEEE-CCCCHhHHHH-HHHHHHHHHHc--CCeEEEE-EECCC-----------------------CHHHHHHcCC
Confidence 788888888 9999999997 99999998886 4687777 65543 2467788888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
. ++ |++++++ +|+++....+
T Consensus 84 ~----------~~--Pt~~~~~-~G~~~~~~~G 103 (153)
T 2wz9_A 84 S----------SV--PTFLFFK-NSQKIDRLDG 103 (153)
T ss_dssp C----------SS--SEEEEEE-TTEEEEEEES
T ss_pred C----------CC--CEEEEEE-CCEEEEEEeC
Confidence 6 44 5599999 9999887775
No 159
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.06 E-value=3.2e-10 Score=76.91 Aligned_cols=75 Identities=13% Similarity=0.172 Sum_probs=55.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.++++||+|| ++||+.|+.. .|.+.++.+++.+ .+.++. +..| .+..++++|+
T Consensus 34 ~~~~~lv~f~-a~wC~~C~~~-~~~~~~~~~~~~~-~~~~~~-vd~~-----------------------~~~~l~~~~~ 86 (130)
T 2dml_A 34 SDGLWLVEFY-APWCGHCQRL-TPEWKKAATALKD-VVKVGA-VNAD-----------------------KHQSLGGQYG 86 (130)
T ss_dssp CSSCEEEEEE-CTTCSTTGGG-HHHHHHHHHHTTT-TSEEEE-EETT-----------------------TCHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCHHHHhh-CHHHHHHHHHhcC-ceEEEE-EeCC-----------------------CCHHHHHHcC
Confidence 3577887777 9999999997 9999999988853 366555 5532 2456888898
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |++++++++|+++..+.+
T Consensus 87 v~----------~~--Pt~~~~~~~~~~~~~~~G 108 (130)
T 2dml_A 87 VQ----------GF--PTIKIFGANKNKPEDYQG 108 (130)
T ss_dssp CC----------SS--SEEEEESSCTTSCEECCS
T ss_pred CC----------cc--CEEEEEeCCCCeEEEeec
Confidence 86 34 559999999985555543
No 160
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.05 E-value=2.1e-10 Score=77.09 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=62.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.++++||+|| ++||+.|+.. .|.+.++.+++ .++.++. +..+. +..++++|+
T Consensus 22 ~~~~vlv~f~-a~wC~~C~~~-~~~l~~l~~~~--~~v~~~~-vd~~~-----------------------~~~~~~~~~ 73 (118)
T 2f51_A 22 APGLVLVDFF-ATWCGPCQRL-GQILPSIAEAN--KDVTFIK-VDVDK-----------------------NGNAADAYG 73 (118)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHC--TTSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHC--CCeEEEE-EECCC-----------------------CHHHHHhcC
Confidence 3677888887 9999999997 99999998887 6787777 65543 245778888
Q ss_pred CccccCCCCCCCCcceeEEEEEec---CCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAE---NGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~---~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |++++++. +|+++....+.. .++++++++
T Consensus 74 i~----------~~--Pt~~~~~~~~~~G~~~~~~~G~~----~~~l~~~~~ 109 (118)
T 2f51_A 74 VS----------SI--PALFFVKKEGNEIKTLDQFVGAD----VSRIKADIE 109 (118)
T ss_dssp CC----------SS--SEEEEEEEETTEEEEEEEEESCC----HHHHHHHHH
T ss_pred CC----------CC--CEEEEEeCCCCcceEEEeecCCC----HHHHHHHHH
Confidence 86 34 55888876 499988888532 233555544
No 161
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.05 E-value=3.2e-10 Score=73.64 Aligned_cols=84 Identities=8% Similarity=0.140 Sum_probs=60.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .+.+.++.+++. ++.++. +..+. +..++++|+
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~~~~~-v~~~~-----------------------~~~~~~~~~ 69 (104)
T 2vim_A 18 KGRLIVVDFF-AQWCGPCRNI-APKVEALAKEIP--EVEFAK-VDVDQ-----------------------NEEAAAKYS 69 (104)
T ss_dssp TTSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHCC--CCEEEE-EeccC-----------------------CHHHHHHcC
Confidence 5788888888 9999999997 899999988774 787777 66542 345778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| ++++ .++|+++....+. +.+.+.+.|+
T Consensus 70 v~----------~~P--t~~~-~~~g~~~~~~~G~----~~~~l~~~l~ 101 (104)
T 2vim_A 70 VT----------AMP--TFVF-IKDGKEVDRFSGA----NETKLRETIT 101 (104)
T ss_dssp CC----------SSS--EEEE-EETTEEEEEEESS----CHHHHHHHHH
T ss_pred Cc----------ccc--EEEE-EeCCcEEEEEeCC----CHHHHHHHHH
Confidence 86 344 4444 4699998877742 2344555554
No 162
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.05 E-value=3.3e-10 Score=77.08 Aligned_cols=73 Identities=8% Similarity=0.123 Sum_probs=56.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++||+.|... .|.+.++.+++ .++.++. +..|. +..++++|+
T Consensus 36 ~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~--~~v~~~~-vd~d~-----------------------~~~l~~~~~ 87 (125)
T 1r26_A 36 EDILTVAWFT-AVWCGPCKTI-ERPMEKIAYEF--PTVKFAK-VDADN-----------------------NSEIVSKCR 87 (125)
T ss_dssp SSSCEEEEEE-CTTCHHHHHT-HHHHHHHHHHC--TTSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred cCCEEEEEEE-CCcCHhHHHH-HHHHHHHHHHC--CCCEEEE-EECCC-----------------------CHHHHHHcC
Confidence 5678888887 9999999998 99999998887 4687777 66642 345788888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++| + +++.++|+++..+.+
T Consensus 88 v~----------~~P--t-~~i~~~G~~~~~~~G 108 (125)
T 1r26_A 88 VL----------QLP--T-FIIARSGKMLGHVIG 108 (125)
T ss_dssp CC----------SSS--E-EEEEETTEEEEEEES
T ss_pred CC----------ccc--E-EEEEeCCeEEEEEeC
Confidence 86 454 4 555599999887774
No 163
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=2.7e-10 Score=77.02 Aligned_cols=88 Identities=11% Similarity=0.125 Sum_probs=60.3
Q ss_pred hhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHH
Q 045485 31 DLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTK 110 (164)
Q Consensus 31 d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (164)
+..++ .++|+|| ++||+.|... .|.+.++++++.+.++.++. +..+. +..+++
T Consensus 19 ~~~~~-~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~v~~~~-vd~~~-----------------------~~~~~~ 71 (126)
T 1x5e_A 19 ELLEG-DWMIEFY-APWCPACQNL-QPEWESFAEWGEDLEVNIAK-VDVTE-----------------------QPGLSG 71 (126)
T ss_dssp HHTSS-EEEEEEE-CSSCHHHHHH-HHHHHHHHHHHGGGTCEEEE-EETTT-----------------------CHHHHH
T ss_pred HHhCC-CEEEEEE-CCCCHHHHHH-hHHHHHHHHHhccCCeEEEE-EECcC-----------------------CHHHHH
Confidence 44344 4777777 9999999997 99999999988766787777 65442 245778
Q ss_pred HhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 111 AIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+|++. ++ |+++++ ++|++ ..+. +..+.+.+.+.|+
T Consensus 72 ~~~v~----------~~--Pt~~~~-~~G~~-~~~~---G~~~~~~l~~~l~ 106 (126)
T 1x5e_A 72 RFIIN----------AL--PTIYHC-KDGEF-RRYQ---GPRTKKDFINFIS 106 (126)
T ss_dssp HTTCC----------SS--SEEEEE-ETTEE-EECC---SCCCHHHHHHHHH
T ss_pred HcCCc----------cc--CEEEEE-eCCeE-EEee---cCCCHHHHHHHHH
Confidence 88886 34 558888 89986 3333 2333444444444
No 164
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.03 E-value=3.3e-10 Score=74.50 Aligned_cols=86 Identities=13% Similarity=0.191 Sum_probs=60.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|.|| ++||+.|... .|.+.++.+++.+ .+.++. +..+. +..++++|+
T Consensus 21 ~~~~vlv~f~-a~~C~~C~~~-~~~~~~~~~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~ 73 (111)
T 3gnj_A 21 EGKACLVMFS-RKNCHVCQKV-TPVLEELRLNYEE-SFGFYY-VDVEE-----------------------EKTLFQRFS 73 (111)
T ss_dssp SCCCEEEEEE-CSSCHHHHHH-HHHHHHHHHHTTT-TSEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred cCCEEEEEEe-CCCChhHHHH-HHHHHHHHHHcCC-ceEEEE-EECCc-----------------------ChhHHHhcC
Confidence 4677888887 9999999997 9999999988753 477666 55532 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |+++++ ++|+++....+. .+.+.+.+.|+
T Consensus 74 v~----------~~--Pt~~~~-~~g~~~~~~~g~---~~~~~l~~~l~ 106 (111)
T 3gnj_A 74 LK----------GV--PQILYF-KDGEYKGKMAGD---VEDDEVEQMIA 106 (111)
T ss_dssp CC----------SS--CEEEEE-ETTEEEEEEESS---CCHHHHHHHHH
T ss_pred CC----------cC--CEEEEE-ECCEEEEEEecc---CCHHHHHHHHH
Confidence 86 34 457777 799988777742 33444444443
No 165
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.03 E-value=2.9e-10 Score=74.64 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=55.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||+.|... .|.+.++.+++ .++.++. +..|. +..++++|+
T Consensus 20 ~~~~v~v~f~-a~wC~~C~~~-~~~~~~~~~~~--~~~~~~~-vd~~~-----------------------~~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFT-MRGCGPCLRI-APAFSSMSNKY--PQAVFLE-VDVHQ-----------------------CQGTAATNN 71 (107)
T ss_dssp TTSCEEEEEE-CSSCHHHHHH-HHHHHHHHHHC--TTSEEEE-EETTT-----------------------SHHHHHHTT
T ss_pred CCCEEEEEEE-CCCChhhHHH-HHHHHHHHHHC--CCcEEEE-EECcc-----------------------CHHHHHhcC
Confidence 5778888887 9999999997 89999998887 4677777 55542 245778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++| +++++ ++|+++..+.+
T Consensus 72 v~----------~~P--t~~~~-~~G~~~~~~~G 92 (107)
T 1gh2_A 72 IS----------ATP--TFQFF-RNKVRIDQYQG 92 (107)
T ss_dssp CC----------SSS--EEEEE-ETTEEEEEEES
T ss_pred CC----------ccc--EEEEE-ECCeEEEEEeC
Confidence 86 444 46666 89999887775
No 166
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.02 E-value=8.1e-10 Score=74.89 Aligned_cols=87 Identities=15% Similarity=0.262 Sum_probs=58.1
Q ss_pred CCCcEEEEEecCCCCc--------------CCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceE
Q 045485 34 SNKKAILFAVPGAFTP--------------TCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVL 99 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp--------------~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~ 99 (164)
++++++|.|| ++||+ .|+.. .|.+.++.+++.+ ++.++. +..|.
T Consensus 20 ~~k~vlv~F~-a~wC~~c~~l~~~~~~~~~~C~~~-~p~~~~l~~~~~~-~~~~~~-vd~d~------------------ 77 (123)
T 1oaz_A 20 ADGAILVDFW-AEWCGPIEESDDRRYDLVGPCKMI-APILDEIADEYQG-KLTVAK-LNIDQ------------------ 77 (123)
T ss_dssp CSSEEEEEEE-CSSCSCBSSSTTSCCSCCCCCCTT-HHHHTTC--------CEEEE-EETTS------------------
T ss_pred CCCeEEEEEE-CCCCccccccccccccCCCCcHHH-HHHHHHHHHHhcC-CeEEEE-EECCC------------------
Confidence 4677888777 99999 99997 9999999888864 466666 55442
Q ss_pred EEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 100 LLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 100 ~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+..++++||+. ++ |+++++ ++|+++....+. .+.+++.+.|+.
T Consensus 78 -----~~~l~~~~~v~----------~~--Pt~~~~-~~G~~~~~~~G~---~~~~~l~~~l~~ 120 (123)
T 1oaz_A 78 -----NPGTAPKYGIR----------GI--PTLLLF-KNGEVAATKVGA---LSKGQLKEFLDA 120 (123)
T ss_dssp -----CTTTGGGGTCC----------BS--SEEEEE-ESSSEEEEEESC---CCHHHHHHHHTT
T ss_pred -----CHHHHHHcCCC----------cc--CEEEEE-ECCEEEEEEeCC---CCHHHHHHHHHH
Confidence 34577899987 44 558888 999998877742 334455555543
No 167
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.02 E-value=4e-10 Score=77.86 Aligned_cols=74 Identities=19% Similarity=0.239 Sum_probs=55.4
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++||+.|... .|.+.++.+++.+ .+.++. |..+ .+..++++|+
T Consensus 23 ~~~~vlv~F~-a~wC~~C~~~-~~~l~~l~~~~~~-~v~~~~-vd~~-----------------------~~~~l~~~~~ 75 (140)
T 3hz4_A 23 SKKPVVVMFY-SPACPYCKAM-EPYFEEYAKEYGS-SAVFGR-INIA-----------------------TNPWTAEKYG 75 (140)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-TSEEEE-EETT-----------------------TCHHHHHHHT
T ss_pred CCCcEEEEEE-CCCChhHHHH-HHHHHHHHHHhCC-ceEEEE-EECC-----------------------cCHhHHHHCC
Confidence 3677888887 9999999997 9999999998864 377666 5543 2346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |+++++ ++|+++....+
T Consensus 76 v~----------~~--Pt~~~~-~~G~~~~~~~G 96 (140)
T 3hz4_A 76 VQ----------GT--PTFKFF-CHGRPVWEQVG 96 (140)
T ss_dssp CC----------EE--SEEEEE-ETTEEEEEEES
T ss_pred CC----------cC--CEEEEE-eCCcEEEEEcC
Confidence 86 34 445555 89999887775
No 168
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.00 E-value=2.7e-10 Score=75.20 Aligned_cols=84 Identities=15% Similarity=0.306 Sum_probs=58.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .+.++++.+++. ++.++. +..|. +..++++|+
T Consensus 25 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~v~~~~-v~~~~-----------------------~~~~~~~~~ 76 (113)
T 1ti3_A 25 SQKLIVVDFT-ASWCPPCKMI-APIFAELAKKFP--NVTFLK-VDVDE-----------------------LKAVAEEWN 76 (113)
T ss_dssp SSSEEEEEEE-CSSCHHHHHH-HHHHHHHHHHCS--SEEEEE-EETTT-----------------------CHHHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHhCC--CcEEEE-EEccc-----------------------cHHHHHhCC
Confidence 3677777777 8999999997 899999888773 676666 55532 346778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| +++++ ++|+++..+.+. +.+.+.+.|+
T Consensus 77 v~----------~~P--t~~~~-~~G~~~~~~~g~----~~~~l~~~l~ 108 (113)
T 1ti3_A 77 VE----------AMP--TFIFL-KDGKLVDKTVGA----DKDGLPTLVA 108 (113)
T ss_dssp CS----------STT--EEEEE-ETTEEEEEEECC----CTTHHHHHHH
T ss_pred CC----------ccc--EEEEE-eCCEEEEEEecC----CHHHHHHHHH
Confidence 86 454 45555 899998887752 2344555544
No 169
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.00 E-value=7e-12 Score=89.45 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=58.7
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcc
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNG 106 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (164)
++++.. +++++||+|| ++|||+|+.. .|.|.++.+.+. .++.++. |..|....
T Consensus 39 ~~~~~~-~~k~vlv~F~-a~WC~~C~~~-~p~l~~~~~~~~-~~~~~~~-v~~d~~~~---------------------- 91 (164)
T 1sen_A 39 KKEAAA-SGLPLMVIIH-KSWCGACKAL-KPKFAESTEISE-LSHNFVM-VNLEDEEE---------------------- 91 (164)
T ss_dssp HHHHHH-HTCCEEEEEE-CTTCHHHHHH-HHHHHTCHHHHH-HHTTSEE-EEEEGGGS----------------------
T ss_pred HHHHHh-cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhh-cCCeEEE-EEecCCch----------------------
Confidence 666666 6899999888 9999999998 999999766543 3566777 65543211
Q ss_pred hHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 107 VFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 107 ~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
.+.+.|++... ++ |+++++|++|+++....+.
T Consensus 92 ~~~~~~~~~~~--------~~--Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 92 PKDEDFSPDGG--------YI--PRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp CSCGGGCTTCS--------CS--SEEEEECTTSCBCTTCCCT
T ss_pred HHHHHhcccCC--------cC--CeEEEECCCCCEEEEEeCC
Confidence 02234554211 23 5699999999998777653
No 170
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.00 E-value=4.5e-10 Score=74.65 Aligned_cols=72 Identities=15% Similarity=0.249 Sum_probs=54.7
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+++++|+|| ++|||.|... .|.++++.+++. ++.++. +..|. +..++++|++
T Consensus 28 ~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~~~~~~-v~~~~-----------------------~~~~~~~~~v 79 (118)
T 2vm1_A 28 GKLVIIDFT-ASWCGPCRVI-APVFAEYAKKFP--GAIFLK-VDVDE-----------------------LKDVAEAYNV 79 (118)
T ss_dssp TCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TSEEEE-EETTT-----------------------SHHHHHHTTC
T ss_pred CCEEEEEEE-CCCCHhHHHH-hHHHHHHHHHCC--CcEEEE-EEccc-----------------------CHHHHHHcCC
Confidence 678888887 8999999997 899999988874 677777 55532 3567788888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
. ++| +++++ ++|+++....+
T Consensus 80 ~----------~~P--t~~~~-~~g~~~~~~~g 99 (118)
T 2vm1_A 80 E----------AMP--TFLFI-KDGEKVDSVVG 99 (118)
T ss_dssp C----------SBS--EEEEE-ETTEEEEEEES
T ss_pred C----------cCc--EEEEE-eCCeEEEEecC
Confidence 6 444 45555 89999887774
No 171
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.00 E-value=2.9e-10 Score=78.22 Aligned_cols=94 Identities=20% Similarity=0.242 Sum_probs=61.8
Q ss_pred CCceeeeehhhh---cCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCc
Q 045485 21 AGELQTITVSDL---TSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDE 97 (164)
Q Consensus 21 ~g~~~~~~l~d~---~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~ 97 (164)
+|....++..++ .++ +++|+|| ++||++|+.. .|.+.++.+++. +.++. |..+..... ..
T Consensus 15 ~~~v~~l~~~~~~~~~~~-~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~---v~~~~-vd~~~~~~~-~~--------- 77 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG-DAILAVY-SKTCPHCHRD-WPQLIQASKEVD---VPIVM-FIWGSLIGE-RE--------- 77 (135)
T ss_dssp TTEEEECCHHHHHHHHTS-SEEEEEE-ETTCHHHHHH-HHHHHHHHTTCC---SCEEE-EEECTTCCH-HH---------
T ss_pred cCceeecCHHHHHHHhCC-cEEEEEE-CCcCHhhhHh-ChhHHHHHHHCC---CEEEE-EECCCchhh-hh---------
Confidence 344433444333 244 6777777 9999999997 999999987763 88888 655432111 11
Q ss_pred eEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 98 VLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 98 ~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
.|....++++|++. ++| ++++.++|+++....+.
T Consensus 78 ----~d~~~~l~~~~~v~----------~~P---t~~~~~~G~~v~~~~G~ 111 (135)
T 3emx_A 78 ----LSAARLEMNKAGVE----------GTP---TLVFYKEGRIVDKLVGA 111 (135)
T ss_dssp ----HHHHHHHHHHHTCC----------SSS---EEEEEETTEEEEEEESC
T ss_pred ----hhhhHHHHHHcCCc----------eeC---eEEEEcCCEEEEEEeCC
Confidence 12346678899987 454 35555599999988853
No 172
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.99 E-value=9.7e-10 Score=73.40 Aligned_cols=86 Identities=14% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.++++||+|| ++|||.|... .|.+.++.+++.. ++.++. +..+. +..++++|+
T Consensus 29 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~~~~~-v~~~~-----------------------~~~~~~~~~ 81 (121)
T 2i1u_A 29 SNKPVLVDFW-ATWCGPCKMV-APVLEEIATERAT-DLTVAK-LDVDT-----------------------NPETARNFQ 81 (121)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCcEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-CeEEEE-EECCC-----------------------CHHHHHhcC
Confidence 4677888887 8999999997 9999999888753 477777 66542 245778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| +++++ ++|+++....+. .+.+.+.+.|+
T Consensus 82 i~----------~~P--t~~~~-~~g~~~~~~~G~---~~~~~l~~~l~ 114 (121)
T 2i1u_A 82 VV----------SIP--TLILF-KDGQPVKRIVGA---KGKAALLRELS 114 (121)
T ss_dssp CC----------SSS--EEEEE-ETTEEEEEEESC---CCHHHHHHHTC
T ss_pred CC----------cCC--EEEEE-ECCEEEEEecCC---CCHHHHHHHHH
Confidence 86 444 45555 699998877742 23334444443
No 173
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.96 E-value=1.7e-10 Score=78.64 Aligned_cols=89 Identities=13% Similarity=0.243 Sum_probs=56.1
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC-CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK-GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~-~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++|+|| ++||+.|... .|.+.++++++... ++.++. +..+. +..++++|+
T Consensus 25 ~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~~~-vd~~~-----------------------~~~~~~~~~ 78 (133)
T 2dj3_A 25 KKDVLIEFY-APWCGHCKQL-EPIYTSLGKKYKGQKDLVIAK-MDATA-----------------------NDITNDQYK 78 (133)
T ss_dssp TSEEEEEEC-CTTCSHHHHH-HHHHHHHHHHHTTSSSEEEEE-ECTTT-----------------------SCCCCSSCC
T ss_pred CCcEEEEEE-CCCChhHHHH-HHHHHHHHHHhcCCCCEEEEE-ecCCc-----------------------CHHHHhhcC
Confidence 677777777 9999999998 99999999998753 344444 43321 122345678
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++ |++++++++|++...... ++..+.+++.+.|+
T Consensus 79 v~----------~~--Pt~~~~~~g~~~~~~~~~-gg~~~~~~l~~~l~ 114 (133)
T 2dj3_A 79 VE----------GF--PTIYFAPSGDKKNPIKFE-GGNRDLEHLSKFID 114 (133)
T ss_dssp CS----------SS--SEEEEECTTCTTSCEECC-SSCCSTTHHHHHHH
T ss_pred CC----------cC--CEEEEEeCCCcccceEec-CCCcCHHHHHHHHH
Confidence 76 34 559999988876433221 12234444444443
No 174
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.96 E-value=3.5e-10 Score=75.14 Aligned_cols=87 Identities=14% Similarity=0.273 Sum_probs=57.4
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKG--VDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
++++++|+|| ++|||.|... .|.+.++.+++++.+ +.++. +..+. +..++++
T Consensus 23 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~~~~~v~~~~-vd~~~-----------------------~~~~~~~ 76 (120)
T 1mek_A 23 AHKYLLVEFY-APWCGHCKAL-APEYAKAAGKLKAEGSEIRLAK-VDATE-----------------------ESDLAQQ 76 (120)
T ss_dssp HCSEEEEEEE-CSSCSTTSTT-HHHHHHHHHTTTTTCCCCBCEE-EETTT-----------------------CCSSHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHHhccCCcEEEEE-EcCCC-----------------------CHHHHHH
Confidence 4677777777 9999999997 999999988887543 54444 33321 2467889
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEE--EEEeecCCceeecCHHHHHh
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVK--VLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~--~~~~~~~~~~~~~~~~~~l~ 162 (164)
|++. ++ |+++++ ++|+++ ..+.+ ..+.+.+.+.|+
T Consensus 77 ~~v~----------~~--Pt~~~~-~~g~~~~~~~~~g---~~~~~~l~~~l~ 113 (120)
T 1mek_A 77 YGVR----------GY--PTIKFF-RNGDTASPKEYTA---GREADDIVNWLK 113 (120)
T ss_dssp HTCC----------SS--SEEEEE-ESSCSSSCEECCC---CSSHHHHHHHHH
T ss_pred CCCC----------cc--cEEEEE-eCCCcCCcccccC---ccCHHHHHHHHH
Confidence 9987 44 558888 678765 44443 233434444444
No 175
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.96 E-value=6.8e-10 Score=82.62 Aligned_cols=74 Identities=15% Similarity=0.259 Sum_probs=55.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||+|| ++||++|+.. .|.+.++++++.+ .+.++. |..|. +..++++|+
T Consensus 29 ~~k~vvv~F~-a~wC~~C~~~-~p~l~~l~~~~~~-~v~~~~-vd~d~-----------------------~~~l~~~~~ 81 (222)
T 3dxb_A 29 ADGAILVDFW-AEWCGPCKMI-APILDEIADEYQG-KLTVAK-LNIDQ-----------------------NPGTAPKYG 81 (222)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTT-----------------------CTTTGGGGT
T ss_pred cCCEEEEEEE-CCcCHHHHHH-HHHHHHHHHHhcC-CcEEEE-EECCC-----------------------CHHHHHHcC
Confidence 4677888888 9999999998 9999999998864 377777 65542 345677889
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++| +++++ ++|+++....+
T Consensus 82 v~----------~~P--t~~~~-~~G~~~~~~~G 102 (222)
T 3dxb_A 82 IR----------GIP--TLLLF-KNGEVAATKVG 102 (222)
T ss_dssp CC----------SBS--EEEEE-ETTEEEEEEES
T ss_pred CC----------cCC--EEEEE-ECCeEEEEecc
Confidence 87 455 45555 68999887774
No 176
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.45 E-value=1.2e-10 Score=75.75 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=58.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||.|... .+.++++.+++.. ++.++. +..+ .+..++++|+
T Consensus 18 ~~~~~~v~f~-~~~C~~C~~~-~~~~~~~~~~~~~-~~~~~~-v~~~-----------------------~~~~~~~~~~ 70 (106)
T 2yj7_A 18 SDKPVLVDFW-APWCGPCRMI-APIIEELAKEYEG-KVKVVK-VNVD-----------------------ENPNTAAQYG 70 (106)
Confidence 4667777777 9999999997 8999999888763 455555 4332 2234667788
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+. ++ |+++++ ++|+++..+.+ ..+.+++.+.|+.
T Consensus 71 v~----------~~--Pt~~~~-~~g~~~~~~~g---~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 71 IR----------SI--PTLLLF-KNGQVVDRLVG---AQPKEALKERIDK 104 (106)
Confidence 76 33 557777 89998877764 2334455555543
No 177
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.91 E-value=5.9e-10 Score=74.74 Aligned_cols=69 Identities=10% Similarity=0.075 Sum_probs=52.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||+.|... .|.+.++.+++.+ ++.++. +..+. +..++++|+
T Consensus 20 ~~~~~lv~f~-a~~C~~C~~~-~~~~~~~~~~~~~-~~~~~~-vd~~~-----------------------~~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFY-APWCGPCQNF-APEFELLARMIKG-KVRAGK-VDCQA-----------------------YPQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-CeEEEE-EeCcC-----------------------CHHHHHHcC
Confidence 4667888877 9999999997 9999999998863 577777 65543 235778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
+. ++ |++++++++|++
T Consensus 73 v~----------~~--Pt~~~~~~~~~~ 88 (122)
T 3aps_A 73 IK----------AY--PSVKLYQYERAK 88 (122)
T ss_dssp CC----------SS--SEEEEEEEEGGG
T ss_pred CC----------cc--ceEEEEeCCCcc
Confidence 86 34 559999988874
No 178
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.89 E-value=3.2e-10 Score=83.62 Aligned_cols=74 Identities=15% Similarity=0.186 Sum_probs=55.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
+++++||.|| ++||+.|... .|.+.++.+++.+ .+.++. |..+. +..+++.|+
T Consensus 113 ~~~~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~ 165 (210)
T 3apq_A 113 SGELWFVNFY-SPGCSHCHDL-APTWREFAKEVDG-LLRIGA-VNCGD-----------------------DRMLCRMKG 165 (210)
T ss_dssp HSCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTBT-TBEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred cCCcEEEEEe-CCCChhHHHH-HHHHHHHHHHhcC-ceEEEE-EECCc-----------------------cHHHHHHcC
Confidence 5788888888 9999999997 9999999988853 366666 55432 235777888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++| +++++ ++|+++....+
T Consensus 166 v~----------~~P--t~~~~-~~G~~~~~~~G 186 (210)
T 3apq_A 166 VN----------SYP--SLFIF-RSGMAAVKYNG 186 (210)
T ss_dssp CC----------SSS--EEEEE-CTTSCCEECCS
T ss_pred CC----------cCC--eEEEE-ECCCceeEecC
Confidence 86 444 47777 99998766664
No 179
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.89 E-value=9.8e-10 Score=76.45 Aligned_cols=74 Identities=11% Similarity=0.103 Sum_probs=53.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.+++++|.|| ++||++|+.. .|.+.++++++.+ .+.++. |..|. +..++++|+
T Consensus 22 ~~k~vlv~F~-a~wC~~C~~~-~p~l~~l~~~~~~-~v~~~~-vd~d~-----------------------~~~~~~~~~ 74 (142)
T 1qgv_A 22 EDRVVVIRFG-HDWDPTCMKM-DEVLYSIAEKVKN-FAVIYL-VDITE-----------------------VPDFNKMYE 74 (142)
T ss_dssp SSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTT-TEEEEE-EETTT-----------------------CCTTTTSSC
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHhCC-CeEEEE-Ecccc-----------------------CHHHHHHcC
Confidence 3677888887 9999999998 9999999998853 466666 55542 234567888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |+++++ ++|+++....+
T Consensus 75 i~----------~~--Pt~~~~-~~G~~v~~~~g 95 (142)
T 1qgv_A 75 LY----------DP--CTVMFF-FRNKHIMIDLG 95 (142)
T ss_dssp SC----------SS--CEEEEE-ETTEEEEEECC
T ss_pred CC----------CC--CEEEEE-ECCcEEEEecC
Confidence 86 34 447777 58888776554
No 180
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.88 E-value=1.7e-09 Score=72.28 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=52.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++|||+|+.. .|.+.++.+++. ..+.. +..+..... +....++++||
T Consensus 28 ~~~~~~v~f~-a~wC~~C~~~-~p~l~~~~~~~~---~~v~~-~~~~~~~~~-----------------~~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKETATFFIG-RKTCPYCRKF-AGTLSGVVAETK---AHIYF-INSEEPSQL-----------------NDLQAFRSRYG 84 (118)
T ss_dssp TTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHC---CCCEE-EETTCGGGH-----------------HHHHHHHHHHT
T ss_pred CCCeEEEEEE-CCCCccHHHH-HHHHHHHHHhcC---CeEEE-EECCCcCcH-----------------HHHHHHHHHcC
Confidence 4677888887 9999999997 999999988763 34455 544432110 11235667888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |+++++ ++|+++....+
T Consensus 85 i~----------~~--Pt~~~~-~~G~~~~~~~G 105 (118)
T 1zma_A 85 IP----------TV--PGFVHI-TDGQINVRCDS 105 (118)
T ss_dssp CC----------SS--CEEEEE-ETTEEEEECCT
T ss_pred CC----------CC--CeEEEE-ECCEEEEEecC
Confidence 86 44 447777 58988766553
No 181
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.88 E-value=9.5e-10 Score=72.18 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=52.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC--CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK--GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~--~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
++++++|.|| ++||+.|... .|.+.++.+++.+. ++.++. +..+ .+..++++
T Consensus 20 ~~~~~lv~f~-~~~C~~C~~~-~~~~~~~~~~~~~~~~~~~~~~-vd~~-----------------------~~~~l~~~ 73 (111)
T 3uvt_A 20 AEGITFIKFY-APWCGHCKTL-APTWEELSKKEFPGLAGVKIAE-VDCT-----------------------AERNICSK 73 (111)
T ss_dssp HSSEEEEEEE-CSSCHHHHHH-HHHHHHHHTCCCCC-CCEEEEE-EETT-----------------------TCHHHHHH
T ss_pred cCCcEEEEEE-CCCChhHHHh-hHHHHHHHHHhhccCCceEEEE-Eecc-----------------------ccHhHHHh
Confidence 4677777777 9999999997 89999988776433 444444 4432 23457788
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|++. ++| +++++ ++|+++..+.+
T Consensus 74 ~~v~----------~~P--t~~~~-~~g~~~~~~~g 96 (111)
T 3uvt_A 74 YSVR----------GYP--TLLLF-RGGKKVSEHSG 96 (111)
T ss_dssp TTCC----------SSS--EEEEE-ETTEEEEEECS
T ss_pred cCCC----------ccc--EEEEE-eCCcEEEeccC
Confidence 8886 444 45555 89998877664
No 182
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.87 E-value=2.7e-09 Score=73.48 Aligned_cols=73 Identities=12% Similarity=0.196 Sum_probs=53.5
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
++.+||+|| ++|||.|... .|.+.++.+++.. ++.++. +..+. +..++++|++
T Consensus 50 ~~~vvv~f~-~~~C~~C~~~-~~~l~~l~~~~~~-~v~~~~-vd~~~-----------------------~~~l~~~~~v 102 (140)
T 1v98_A 50 APLTLVDFF-APWCGPCRLV-SPILEELARDHAG-RLKVVK-VNVDE-----------------------HPGLAARYGV 102 (140)
T ss_dssp CCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TEEEEE-EETTT-----------------------CHHHHHHTTC
T ss_pred CCCEEEEEE-CCCCHHHHHH-HHHHHHHHHHccC-ceEEEE-EECCC-----------------------CHHHHHHCCC
Confidence 334666666 9999999997 9999999888863 466666 55442 2357788888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
. ++ |+++++ ++|+++..+.+
T Consensus 103 ~----------~~--Pt~~~~-~~G~~~~~~~G 122 (140)
T 1v98_A 103 R----------SV--PTLVLF-RRGAPVATWVG 122 (140)
T ss_dssp C----------SS--SEEEEE-ETTEEEEEEES
T ss_pred C----------cc--CEEEEE-eCCcEEEEEeC
Confidence 6 44 447766 79999887775
No 183
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.86 E-value=5.5e-09 Score=65.31 Aligned_cols=78 Identities=19% Similarity=0.173 Sum_probs=52.8
Q ss_pred EEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccc
Q 045485 38 AILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELD 117 (164)
Q Consensus 38 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 117 (164)
.|++|| ++|||.|... .|.++++.+++. .++.++. +..| .+..++++||+.
T Consensus 4 ~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~-~~~~~~~-vd~~-----------------------~~~~~~~~~~v~-- 54 (85)
T 1nho_A 4 NIEVFT-SPTCPYCPMA-IEVVDEAKKEFG-DKIDVEK-IDIM-----------------------VDREKAIEYGLM-- 54 (85)
T ss_dssp CEEEES-CSSSCCSTTH-HHHHHHHHHHHC-SSCCEEE-ECTT-----------------------TCGGGGGGTCSS--
T ss_pred EEEEEE-CCCCcchHHH-HHHHHHHHHHhc-CCeEEEE-EECC-----------------------CCHHHHHhCCce--
Confidence 456666 9999999997 999999988885 3677777 6553 234677889986
Q ss_pred cCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 118 LSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 118 ~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
++| ++++ +|++ ...+ ..+.+.+.+.|+
T Consensus 55 --------~~P--t~~~---~G~~--~~~G---~~~~~~l~~~l~ 81 (85)
T 1nho_A 55 --------AVP--AIAI---NGVV--RFVG---APSREELFEAIN 81 (85)
T ss_dssp --------CSS--EEEE---TTTE--EEEC---SSCCHHHHHHHH
T ss_pred --------eeC--EEEE---CCEE--EEcc---CCCHHHHHHHHH
Confidence 444 4555 8998 4443 223444555544
No 184
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.86 E-value=1.6e-09 Score=73.45 Aligned_cols=70 Identities=7% Similarity=0.006 Sum_probs=50.7
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC----CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHH
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK----GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTK 110 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~----~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (164)
+++++|.|| ++||++|+.. .|.+.++.+++... ++.++. |..+ .+..+++
T Consensus 33 ~~~vlv~F~-a~wC~~C~~~-~p~~~~la~~~~~~~~~~~v~~~~-vd~~-----------------------~~~~l~~ 86 (127)
T 3h79_A 33 EKDVFVLYY-VPWSRHSVAA-MRLWDDLSMSQSQKRNHLTFVAAR-IDGE-----------------------KYPDVIE 86 (127)
T ss_dssp TCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHTSTTTTTEEEEE-EETT-----------------------TCHHHHH
T ss_pred CCCEEEEEE-CCccHHHHHH-hHHHHHHHHHHHhcccCCCeEEEE-EEcc-----------------------ccHhHHH
Confidence 677777777 9999999997 99999999888632 244444 4332 2356788
Q ss_pred HhCCccccCCCCCCCCcceeEEEEEecCCcEE
Q 045485 111 AIGCELDLSDKPMGLGVRSRRYALLAENGVVK 142 (164)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~ 142 (164)
+|+|. ++ |+++++++++++.
T Consensus 87 ~~~v~----------~~--Pt~~~~~~g~~~~ 106 (127)
T 3h79_A 87 RMRVS----------GF--PTMRYYTRIDKQE 106 (127)
T ss_dssp HTTCC----------SS--SEEEEECSSCSSS
T ss_pred hcCCc----------cC--CEEEEEeCCCCCC
Confidence 89987 44 5588998887753
No 185
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.86 E-value=1.1e-09 Score=73.17 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=35.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC----CCcEEEEEecC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK----GVDIVACISVN 80 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~----~v~vi~~is~d 80 (164)
++++++|+|| ++||+.|+.. .|.+.++++++... ++.++. +..+
T Consensus 24 ~~~~vlv~f~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~v~~~~-vd~~ 71 (121)
T 2djj_A 24 DTKDVLIEFY-APWCGHCKAL-APKYEELGALYAKSEFKDRVVIAK-VDAT 71 (121)
T ss_dssp TTSCEEEEEE-CSSCTTHHHH-HHHHHHHHHHHTTSSCTTSSEEEE-EETT
T ss_pred CCCCEEEEEE-CCCCHhHHHh-hHHHHHHHHHHhhcccCCceEEEE-EECc
Confidence 5678888888 9999999997 99999999999752 566666 5544
No 186
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.86 E-value=4.7e-10 Score=75.88 Aligned_cols=84 Identities=13% Similarity=0.209 Sum_probs=59.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|+|| ++||+.|... .|.+.++.+++. ++.++. +..| .+..++++|+
T Consensus 35 ~~~~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~--~v~~~~-v~~~-----------------------~~~~~~~~~~ 86 (130)
T 1wmj_A 35 AGKVVIIDFT-ASWCGPCRFI-APVFAEYAKKFP--GAVFLK-VDVD-----------------------ELKEVAEKYN 86 (130)
T ss_dssp TTCBCBEECC-SSSCSCSSSS-HHHHHHHHHHCT--TBCCEE-CCTT-----------------------TSGGGHHHHT
T ss_pred cCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHCC--CCEEEE-Eecc-----------------------chHHHHHHcC
Confidence 4777777777 9999999998 999999988874 677676 5543 2356788899
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
+. ++| ++ ++.++|+++....+ ...+.+.+.|+
T Consensus 87 v~----------~~P--t~-~~~~~g~~~~~~~g----~~~~~l~~~l~ 118 (130)
T 1wmj_A 87 VE----------AMP--TF-LFIKDGAEADKVVG----ARKDDLQNTIV 118 (130)
T ss_dssp CC----------SSC--CC-CBCTTTTCCBCCCT----TCTTTHHHHHH
T ss_pred CC----------ccc--eE-EEEeCCeEEEEEeC----CCHHHHHHHHH
Confidence 86 454 34 44589998766553 23445555554
No 187
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.79 E-value=6.3e-09 Score=77.42 Aligned_cols=70 Identities=17% Similarity=0.302 Sum_probs=51.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKG--VDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
++++++|+|| ++||++|+.. .|.+.++++++++.+ +.++. +..+ .+..++++
T Consensus 31 ~~~~v~v~F~-a~wC~~C~~~-~p~~~~~~~~~~~~~~~~~~~~-vd~~-----------------------~~~~l~~~ 84 (241)
T 3idv_A 31 DKDTVLLEFY-APWCGHCKQF-APEYEKIANILKDKDPPIPVAK-IDAT-----------------------SASVLASR 84 (241)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHTSSSCCCEEE-EETT-----------------------TCHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-hHHHHHHHHHHhhcCCceEEEE-Eecc-----------------------CCHHHHHh
Confidence 5677777777 9999999997 999999999998765 66666 5443 23467888
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEE
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVK 142 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~ 142 (164)
|++. ++| ++++++ +|+++
T Consensus 85 ~~v~----------~~P--t~~~~~-~g~~~ 102 (241)
T 3idv_A 85 FDVS----------GYP--TIKILK-KGQAV 102 (241)
T ss_dssp TTCC----------SSS--EEEEEE-TTEEE
T ss_pred cCCC----------cCC--EEEEEc-CCCcc
Confidence 8886 444 477775 56655
No 188
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.78 E-value=4.3e-09 Score=71.12 Aligned_cols=76 Identities=20% Similarity=0.324 Sum_probs=55.5
Q ss_pred CCCcEEEEEecCC-------CCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcc
Q 045485 34 SNKKAILFAVPGA-------FTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNG 106 (164)
Q Consensus 34 ~g~~vvl~f~~~~-------~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (164)
++++++|+|| ++ |||+|... .|.+.++.+++.+ ++.++. +..++.. .| .|.+.
T Consensus 23 ~~~~v~v~F~-a~~~~~~~~wC~~C~~~-~p~l~~~~~~~~~-~~~~~~-vd~~~~~---~~-------------~d~~~ 82 (123)
T 1wou_A 23 NGKTIFAYFT-GSKDAGGKSWCPDCVQA-EPVVREGLKHISE-GCVFIY-CQVGEKP---YW-------------KDPNN 82 (123)
T ss_dssp TTSEEEEEEE-CCBCTTCCBSCHHHHHH-HHHHHHHGGGCCT-TEEEEE-EECCCHH---HH-------------HCTTC
T ss_pred CCCEEEEEEE-ccCCCCCCCcCHHHHHh-hHHHHHHHHHcCC-CcEEEE-EECCCch---hh-------------hchhH
Confidence 4788888887 89 99999997 9999998887753 677777 6666532 11 15567
Q ss_pred hHHHHhCCccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 107 VFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 107 ~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
.++++|++. ++ |+++++++.+++
T Consensus 83 ~~~~~~~i~----------~~--Pt~~~~~~~~~~ 105 (123)
T 1wou_A 83 DFRKNLKVT----------AV--PTLLKYGTPQKL 105 (123)
T ss_dssp HHHHHHCCC----------SS--SEEEETTSSCEE
T ss_pred HHHHHCCCC----------ee--CEEEEEcCCceE
Confidence 788999997 44 458888874444
No 189
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.77 E-value=5.6e-09 Score=65.30 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=30.5
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
.++++|| ++|||.|... .|.++++.+++. .++.++. +..+
T Consensus 4 ~~vv~f~-~~~C~~C~~~-~~~l~~~~~~~~-~~~~~~~-vd~~ 43 (85)
T 1fo5_A 4 VKIELFT-SPMCPHCPAA-KRVVEEVANEMP-DAVEVEY-INVM 43 (85)
T ss_dssp EEEEEEE-CCCSSCCCTH-HHHHHHHHHHCS-SSEEEEE-EESS
T ss_pred eEEEEEe-CCCCCchHHH-HHHHHHHHHHcC-CceEEEE-EECC
Confidence 4566666 9999999997 899999888775 3566666 5554
No 190
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.75 E-value=2.4e-08 Score=71.86 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=61.5
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhh-H--HHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCCCCceEEEE
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPG-F--VEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGINDEVLLLS 102 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~-l--~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~~~~~~~l~ 102 (164)
+..+.. ++|+++|.|| ++||++|+.. .+. + .++.+.+. .++.++. |..| .++..+.|.+.
T Consensus 32 ~~~A~~-~~KpVlvdF~-A~WC~~Ck~m-~~~~f~~~~va~~l~-~~fv~ik-VD~de~~~l~~~y~~~----------- 95 (173)
T 3ira_A 32 FEKARK-ENKPVFLSIG-YSTCHWCHMM-AHESFEDEEVAGLMN-EAFVSIK-VDREERPDIDNIYMTV----------- 95 (173)
T ss_dssp HHHHHH-HTCCEEEEEE-CTTCHHHHHH-HHHTTTCHHHHHHHH-HHCEEEE-EETTTCHHHHHHHHHH-----------
T ss_pred HHHHHH-hCCCEEEecc-cchhHhhccc-cccccCCHHHHHHHH-hcCceee-eCCcccCcHHHHHHHH-----------
Confidence 555555 5899999998 9999999985 442 2 23334443 2455555 4444 33333333321
Q ss_pred eCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee--cCCceeecCHHHHHhh
Q 045485 103 DGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE--EGGAFTFSGAEDMLKA 163 (164)
Q Consensus 103 D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~--~~~~~~~~~~~~~l~~ 163 (164)
+...+|+. |+ |++++++++|++++...+ ..+....+...++|+.
T Consensus 96 -----~q~~~gv~----------g~--Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~ 141 (173)
T 3ira_A 96 -----CQIILGRG----------GW--PLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPR 141 (173)
T ss_dssp -----HHHHHSCC----------CS--SEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHH
T ss_pred -----HHHHcCCC----------CC--cceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHH
Confidence 11224665 45 559999999999887433 1122345667777654
No 191
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.72 E-value=2.3e-08 Score=73.89 Aligned_cols=74 Identities=14% Similarity=0.062 Sum_probs=53.2
Q ss_pred CCcE-EEEEecCCCCcCCCcCchhhHHHhHHHHHh---CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHH
Q 045485 35 NKKA-ILFAVPGAFTPTCSQKHLPGFVEKSAELKS---KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTK 110 (164)
Q Consensus 35 g~~v-vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~---~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (164)
++++ ++.|| ++|||+|+.. .|.+++++.++.+ .++.++. +..+ .+..+++
T Consensus 133 ~~~~~~v~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~~v~~~~-vd~~-----------------------~~~~l~~ 186 (226)
T 1a8l_A 133 DQDVRILVFV-TPTCPYCPLA-VRMAHKFAIENTKAGKGKILGDM-VEAI-----------------------EYPEWAD 186 (226)
T ss_dssp CSCEEEEEEE-CSSCTTHHHH-HHHHHHHHHHHHHTTCCCEEEEE-EEGG-----------------------GCHHHHH
T ss_pred CCCcEEEEEe-CCCCCccHHH-HHHHHHHHHhcccccCCcEEEEE-EEcc-----------------------cCHHHHH
Confidence 3556 66776 9999999997 9999999999874 2566555 4433 2345778
Q ss_pred HhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 111 AIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+||+. ++| + +++.++|+++..+.+
T Consensus 187 ~~~v~----------~~P--t-~~~~~~G~~~~~~~G 210 (226)
T 1a8l_A 187 QYNVM----------AVP--K-IVIQVNGEDRVEFEG 210 (226)
T ss_dssp HTTCC----------SSC--E-EEEEETTEEEEEEES
T ss_pred hCCCc----------ccC--e-EEEEeCCceeEEEcC
Confidence 89987 454 4 445579998877774
No 192
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.71 E-value=6.4e-09 Score=72.51 Aligned_cols=71 Identities=10% Similarity=0.118 Sum_probs=44.8
Q ss_pred CcEEEEEecCCC--CcCCCcCchhhHHHhHHHHHhCCCc--EEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 36 KKAILFAVPGAF--TPTCSQKHLPGFVEKSAELKSKGVD--IVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 36 ~~vvl~f~~~~~--cp~C~~~~l~~l~~~~~~~~~~~v~--vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
+.+||+|+ ++| |++|+.. .|.|.++++++ .++. ++. |..|. +..++++
T Consensus 35 ~~~vv~f~-~~~~~C~~C~~l-~P~l~~la~~~--~~v~~~~~~-Vd~d~-----------------------~~~la~~ 86 (142)
T 2es7_A 35 GDGVILLS-SDPRRTPEVSDN-PVMIAELLREF--PQFDWQVAV-ADLEQ-----------------------SEAIGDR 86 (142)
T ss_dssp CSEEEEEC-CCSCC----CCH-HHHHHHHHHTC--TTSCCEEEE-ECHHH-----------------------HHHHHHT
T ss_pred CCEEEEEE-CCCCCCccHHHH-HHHHHHHHHHh--cccceeEEE-EECCC-----------------------CHHHHHh
Confidence 34666555 766 9999997 99999999888 4577 666 54431 2457788
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|+|. ++ |+++++ ++|+++....+
T Consensus 87 ~~V~----------~i--PT~~~f-k~G~~v~~~~G 109 (142)
T 2es7_A 87 FNVR----------RF--PATLVF-TDGKLRGALSG 109 (142)
T ss_dssp TTCC----------SS--SEEEEE-SCC----CEES
T ss_pred cCCC----------cC--CeEEEE-eCCEEEEEEeC
Confidence 8887 45 458888 99999887775
No 193
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.71 E-value=1.2e-09 Score=77.17 Aligned_cols=91 Identities=8% Similarity=-0.014 Sum_probs=55.4
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhH--HHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKS--AELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~--~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
++|+++|.|| ++||++|+.. .|.+.+.. .++.+ ..++. |..|.. + ...+..
T Consensus 43 ~~KpVlV~F~-A~WC~~Ck~m-~p~~~~~~~~~~~~~--~~fv~-V~vD~e------------~----------~~~~~~ 95 (151)
T 3ph9_A 43 SKKPLMVIHH-LEDCQYSQAL-KKVFAQNEEIQEMAQ--NKFIM-LNLMHE------------T----------TDKNLS 95 (151)
T ss_dssp HTCCEEEEEC-CTTCHHHHHH-HHHHHHCHHHHHHHH--HTCEE-EEESSC------------C----------SCGGGC
T ss_pred cCCcEEEEEE-CCCCHhHHHH-HHHHhcCHHHHHHhh--cCeEE-EEecCC------------c----------hhhHhh
Confidence 4788888888 9999999997 78887652 22222 23455 444420 0 112345
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCc----eeecCHHHHHhh
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGA----FTFSGAEDMLKA 163 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~----~~~~~~~~~l~~ 163 (164)
|++. ++ |+++++|++|+++...+|..+. ....+++.+|+.
T Consensus 96 ~~v~----------~~--PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 96 PDGQ----------YV--PRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp TTCC----------CS--SEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHH
T ss_pred cCCC----------CC--CEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHH
Confidence 5554 44 5599999999998877763110 223455555543
No 194
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.70 E-value=1.1e-08 Score=85.34 Aligned_cols=77 Identities=12% Similarity=0.188 Sum_probs=58.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh--CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS--KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~--~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
.+++++|.|| ++||++|+.. .|.+.++++++.+ .++.++. |..+. |.+..++++
T Consensus 29 ~~k~vlV~Fy-A~WC~pCk~~-~P~l~~la~~~~~~~~~v~~~~-VD~d~---------------------d~~~~l~~~ 84 (519)
T 3t58_A 29 SSSAWAVEFF-ASWCGHAIAF-APTWKELANDVKDWRPALNLAV-LDCAE---------------------ETNSAVCRE 84 (519)
T ss_dssp CSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHGGGTTTEEEEE-EETTS---------------------GGGHHHHHH
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhhCcCCcEEEEE-EECCc---------------------cccHHHHHH
Confidence 3567777777 9999999998 9999999999975 2566666 65543 335678889
Q ss_pred hCCccccCCCCCCCCcceeEEEEEec---CCcEEEEEe
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAE---NGVVKVLNL 146 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~---~G~I~~~~~ 146 (164)
|+|. ++ |+++++++ +|+++....
T Consensus 85 ~~V~----------~~--PTl~~f~~g~~~G~~~~~~~ 110 (519)
T 3t58_A 85 FNIA----------GF--PTVRFFQAFTKNGSGATLPG 110 (519)
T ss_dssp TTCC----------SB--SEEEEECTTCCSCCCEEECC
T ss_pred cCCc----------cc--CEEEEEcCcccCCCceeEec
Confidence 9987 44 55999997 777666555
No 195
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.70 E-value=5.6e-09 Score=79.23 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=58.3
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+++|||+|| ++||++|... .|.|.+++.++. ++.++. |..+. .. +++.|++
T Consensus 133 ~k~VvV~Fy-a~wC~~Ck~l-~p~l~~La~~~~--~v~f~k-Vd~d~----------~~--------------l~~~~~I 183 (245)
T 1a0r_P 133 ITTIVVHIY-EDGIKGCDAL-NSSLICLAAEYP--MVKFCK-IKASN----------TG--------------AGDRFSS 183 (245)
T ss_dssp TCEEEEEEE-CTTSTTHHHH-HHHHHHHHHHCT--TSEEEE-EEHHH----------HC--------------CTTSSCT
T ss_pred CCEEEEEEE-CCCChHHHHH-HHHHHHHHHHCC--CCEEEE-EeCCc----------HH--------------HHHHCCC
Confidence 677888887 9999999998 999999999884 577777 54421 11 2346777
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCC----ceeecCHHHHHhh
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGG----AFTFSGAEDMLKA 163 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~----~~~~~~~~~~l~~ 163 (164)
. ++| +++++ ++|+++...++... .+...+++.+|..
T Consensus 184 ~----------~~P--Tll~~-~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 184 D----------VLP--TLLVY-KGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp T----------TCS--EEEEE-ETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred C----------CCC--EEEEE-ECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 5 454 46555 59999988876321 1233345555543
No 196
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.66 E-value=5.4e-09 Score=71.88 Aligned_cols=70 Identities=10% Similarity=0.057 Sum_probs=49.9
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
++++||+|| ++||++|+.. .|.+.++++++ .++.++. |..+.. . ++|++
T Consensus 30 ~~~vvv~f~-a~wC~~C~~~-~p~l~~la~~~--~~v~~~~-vd~~~~------------~--------------~~~~i 78 (135)
T 2dbc_A 30 DLWVVIHLY-RSSVPMCLVV-NQHLSVLARKF--PETKFVK-AIVNSC------------I--------------EHYHD 78 (135)
T ss_dssp SCEEEEEEC-CTTCHHHHHH-HHHHHHHHHHC--SSEEEEE-ECCSSS------------C--------------SSCCS
T ss_pred CCEEEEEEE-CCCChHHHHH-HHHHHHHHHHC--CCcEEEE-EEhhcC------------c--------------ccCCC
Confidence 356777777 9999999997 99999998877 4566666 544431 0 36777
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEeec
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEE 148 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~ 148 (164)
. ++ |+++++ ++|+++....+.
T Consensus 79 ~----------~~--Pt~~~~-~~G~~v~~~~G~ 99 (135)
T 2dbc_A 79 N----------CL--PTIFVY-KNGQIEGKFIGI 99 (135)
T ss_dssp S----------CC--SEEEEE-SSSSCSEEEEST
T ss_pred C----------CC--CEEEEE-ECCEEEEEEEeE
Confidence 5 34 446666 499998888864
No 197
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.1e-08 Score=77.93 Aligned_cols=68 Identities=12% Similarity=0.205 Sum_probs=50.3
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+++++|.|| ++||+.|+.. .|.+.++++++.+ .+.++. +..|. +.+..++++|+|
T Consensus 35 ~~~vlV~F~-A~wC~~C~~~-~p~~~~la~~~~~-~~~~~~-v~~d~---------------------~~~~~l~~~~~I 89 (298)
T 3ed3_A 35 NYTSLVEFY-APWCGHCKKL-SSTFRKAAKRLDG-VVQVAA-VNCDL---------------------NKNKALCAKYDV 89 (298)
T ss_dssp SSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TSEEEE-EETTS---------------------TTTHHHHHHTTC
T ss_pred CCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHccC-CcEEEE-EEccC---------------------ccCHHHHHhCCC
Confidence 567888887 9999999997 9999999998864 366666 77662 124667888888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCC
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENG 139 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G 139 (164)
. ++ |+++++++++
T Consensus 90 ~----------~~--Pt~~~~~~g~ 102 (298)
T 3ed3_A 90 N----------GF--PTLMVFRPPK 102 (298)
T ss_dssp C----------BS--SEEEEEECCC
T ss_pred C----------cc--ceEEEEECCc
Confidence 6 44 4477777543
No 198
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.63 E-value=1.5e-08 Score=67.74 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=56.9
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+++++|+|+ |+|||+|..- .|.|+++.++ .++.++- +-.|.... + ...++..|||
T Consensus 24 ~~~vvi~kh-atwCgpc~~~-~~~~e~~~~~---~~v~~~~-vdVde~r~---------~----------Sn~IA~~~~V 78 (112)
T 3iv4_A 24 NKYVFVLKH-SETCPISANA-YDQFNKFLYE---RDMDGYY-LIVQQERD---------L----------SDYIAKKTNV 78 (112)
T ss_dssp CSEEEEEEE-CTTCHHHHHH-HHHHHHHHHH---HTCCEEE-EEGGGGHH---------H----------HHHHHHHHTC
T ss_pred CCCEEEEEE-CCcCHhHHHH-HHHHHHHhcc---CCceEEE-EEeecCch---------h----------hHHHHHHhCC
Confidence 566666666 9999999996 8999998763 4566666 44432111 1 1457888998
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHH
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDML 161 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l 161 (164)
... . |+.+++ ++|++++.... +.++...+++.|
T Consensus 79 ~h~---------s--Pq~il~-k~G~~v~~~SH--~~I~~~~l~~~~ 111 (112)
T 3iv4_A 79 KHE---------S--PQAFYF-VNGEMVWNRDH--GDINVSSLAQAE 111 (112)
T ss_dssp CCC---------S--SEEEEE-ETTEEEEEEEG--GGCSHHHHHHHT
T ss_pred ccC---------C--CeEEEE-ECCEEEEEeec--cccCHHHHHHhh
Confidence 621 2 445555 99999988775 345554444433
No 199
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.63 E-value=3.6e-08 Score=74.03 Aligned_cols=68 Identities=9% Similarity=0.193 Sum_probs=50.9
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh--CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHh
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS--KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAI 112 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~--~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 112 (164)
+++++|.|| ++||+.|+.. .|.+.++++++.+ .++.++. |..+. |.+..++++|
T Consensus 30 ~~~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~v~~~~-vd~~~---------------------~~~~~l~~~~ 85 (244)
T 3q6o_A 30 RSAWAVEFF-ASWCGHCIAF-APTWXALAEDVKAWRPALYLAA-LDCAE---------------------ETNSAVCRDF 85 (244)
T ss_dssp SSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTGGGTTTEEEEE-EETTS---------------------TTTHHHHHHT
T ss_pred CCeEEEEEE-CCcCHHHHHH-HHHHHHHHHHHHhccCcEEEEE-EeCCc---------------------hhhHHHHHHc
Confidence 467777777 9999999997 9999999999975 3566666 55432 2346788888
Q ss_pred CCccccCCCCCCCCcceeEEEEEecC
Q 045485 113 GCELDLSDKPMGLGVRSRRYALLAEN 138 (164)
Q Consensus 113 gv~~~~~~~~~~~~~~~p~~~lid~~ 138 (164)
+|. ++ |++++++++
T Consensus 86 ~v~----------~~--Pt~~~~~~g 99 (244)
T 3q6o_A 86 NIP----------GF--PTVRFFXAF 99 (244)
T ss_dssp TCC----------SS--SEEEEECTT
T ss_pred CCC----------cc--CEEEEEeCC
Confidence 886 34 558888874
No 200
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.55 E-value=3.3e-07 Score=67.96 Aligned_cols=71 Identities=10% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCC--CcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKG--VDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
+++.++|.|| ++||+.|+.. .|.+.++++++++++ +.++. +..+. +..++++
T Consensus 146 ~~~~~~v~f~-a~wC~~C~~~-~p~~~~~a~~~~~~~~~v~~~~-vd~~~-----------------------~~~l~~~ 199 (241)
T 3idv_A 146 DADIILVEFY-APWCGHCKKL-APEYEKAAKELSKRSPPIPLAK-VDATA-----------------------ETDLAKR 199 (241)
T ss_dssp HCSEEEEEEE-CTTCTGGGGT-HHHHHHHHHHHHTSSSCCCEEE-EETTT-----------------------CHHHHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHh-HHHHHHHHHHHhccCCcEEEEE-EECCC-----------------------CHHHHHH
Confidence 3566777777 9999999997 899999999998654 66666 54442 3457888
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEEE
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVKV 143 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~ 143 (164)
|||. ++| +.++++ +|+.+.
T Consensus 200 ~~v~----------~~P--t~~~~~-~g~~~~ 218 (241)
T 3idv_A 200 FDVS----------GYP--TLKIFR-KGRPYD 218 (241)
T ss_dssp TTCC----------SSS--EEEEEE-TTEEEE
T ss_pred cCCc----------ccC--EEEEEE-CCeEEE
Confidence 8886 444 466665 577654
No 201
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.53 E-value=2.2e-07 Score=70.02 Aligned_cols=68 Identities=16% Similarity=0.085 Sum_probs=47.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh---CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS---KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTK 110 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~---~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (164)
.++.++++|| ++|||+|+.. .|.+++++.++.. .++.+.. +..+. +..+++
T Consensus 137 ~~~~~vv~F~-a~wC~~C~~~-~p~l~~la~~~~~~~~~~v~~~~-vd~~~-----------------------~~~~~~ 190 (243)
T 2hls_A 137 KGRVHIETII-TPSCPYCPYA-VLLAHMFAYEAWKQGNPVILSEA-VEAYE-----------------------NPDIAD 190 (243)
T ss_dssp CSCEEEEEEE-CSSCSSHHHH-HHHHHHHHHHHHHTTCCCEEEEE-EETTT-----------------------CHHHHH
T ss_pred CCCcEEEEEE-CCCCCCcHHH-HHHHHHHHHHcccccCCcEEEEE-EECcc-----------------------CHHHHH
Confidence 4565566666 9999999997 9999999988853 4565555 43321 245778
Q ss_pred HhCCccccCCCCCCCCcceeEEEEEecCCcEE
Q 045485 111 AIGCELDLSDKPMGLGVRSRRYALLAENGVVK 142 (164)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~ 142 (164)
+|++. ++| ++++ +|+++
T Consensus 191 ~~~V~----------~vP--t~~i---~G~~~ 207 (243)
T 2hls_A 191 KYGVM----------SVP--SIAI---NGYLV 207 (243)
T ss_dssp HTTCC----------SSS--EEEE---TTEEE
T ss_pred HcCCe----------eeC--eEEE---CCEEE
Confidence 88886 455 4666 88875
No 202
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.52 E-value=3.3e-09 Score=70.29 Aligned_cols=37 Identities=8% Similarity=0.098 Sum_probs=30.8
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHH
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL 66 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 66 (164)
++|++. .++.+||.|| ++|||.|+.. .|.+.++.+++
T Consensus 5 ~~la~~-~~k~~vV~F~-A~WC~~C~~~-~p~~~~~a~~~ 41 (106)
T 3kp8_A 5 VGLAAH-LRQIGGTMYG-AYWCPHCQDQ-KELFGAAFDQV 41 (106)
T ss_dssp HHHHHH-HHHHTCEEEE-CTTCHHHHHH-HHHHGGGGGGS
T ss_pred hHHHHh-cCCCEEEEEE-CCCCHHHHHH-HHHHHHHHHhC
Confidence 678888 4787888887 9999999997 89998887554
No 203
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.52 E-value=2.1e-07 Score=57.05 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=42.8
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCcccc
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDL 118 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 118 (164)
.|.|| ++|||.|+.. .|.++++.+++. .++.++. + | +..++++||+.
T Consensus 3 ~v~f~-a~wC~~C~~~-~~~l~~~~~~~~-~~~~~~~-v--~------------------------~~~~~~~~~v~--- 49 (77)
T 1ilo_A 3 KIQIY-GTGCANCQML-EKNAREAVKELG-IDAEFEK-I--K------------------------EMDQILEAGLT--- 49 (77)
T ss_dssp EEEEE-CSSSSTTHHH-HHHHHHHHHHTT-CCEEEEE-E--C------------------------SHHHHHHHTCS---
T ss_pred EEEEE-cCCChhHHHH-HHHHHHHHHHcC-CceEEEE-e--c------------------------CHHHHHHCCCC---
Confidence 46777 8899999997 899999887764 2344444 2 2 24677888887
Q ss_pred CCCCCCCCcceeEEEEEecCCcEEEE
Q 045485 119 SDKPMGLGVRSRRYALLAENGVVKVL 144 (164)
Q Consensus 119 ~~~~~~~~~~~p~~~lid~~G~I~~~ 144 (164)
++|+ +++ +|+++..
T Consensus 50 -------~~Pt--~~~---~G~~~~~ 63 (77)
T 1ilo_A 50 -------ALPG--LAV---DGELKIM 63 (77)
T ss_dssp -------SSSC--EEE---TTEEEEC
T ss_pred -------cCCE--EEE---CCEEEEc
Confidence 4554 555 8988654
No 204
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.52 E-value=3.8e-07 Score=72.02 Aligned_cols=68 Identities=12% Similarity=0.135 Sum_probs=47.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhh-------HHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcc
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPG-------FVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNG 106 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~-------l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (164)
++++++|.|| ++||+ |... .|. +.++++.+++.++.++. |..+. +.
T Consensus 27 ~~~~~lV~F~-a~wC~-c~~~-~p~~~~~~~~~~~~a~~~~~~~v~~~~-Vd~~~-----------------------~~ 79 (350)
T 1sji_A 27 KYDVLCLYYH-ESVSS-DKVA-QKQFQLKEIVLELVAQVLEHKDIGFVM-VDAKK-----------------------EA 79 (350)
T ss_dssp TCSEEEEEEE-CCSCS-SSTT-SHHHHHHHHHHHHHHHHGGGSSEEEEE-EETTT-----------------------TH
T ss_pred hCCeEEEEEE-CCCCc-chhh-CchhhhhhHHHHHHHHHHhhcCcEEEE-EeCCC-----------------------CH
Confidence 3566777776 99999 9886 899 77777777665666666 54432 34
Q ss_pred hHHHHhCCccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 107 VFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 107 ~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
.++++|||. ++|+ ++++ ++|++
T Consensus 80 ~l~~~~~v~----------~~Pt--~~~~-~~g~~ 101 (350)
T 1sji_A 80 KLAKKLGFD----------EEGS--LYVL-KGDRT 101 (350)
T ss_dssp HHHHHHTCC----------STTE--EEEE-ETTEE
T ss_pred HHHHhcCCC----------ccce--EEEE-ECCcE
Confidence 577888886 4554 7777 77874
No 205
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.50 E-value=8.2e-08 Score=66.71 Aligned_cols=75 Identities=11% Similarity=0.077 Sum_probs=52.5
Q ss_pred CCCcEEEEEecCCC--CcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 34 SNKKAILFAVPGAF--TPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 34 ~g~~vvl~f~~~~~--cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
.++++|| |||+.| |++|+.. .|.|.++.++|.++.+.++- |.. |.+..++.+
T Consensus 33 ~~~~vlV-dF~a~~crCgpCk~i-aPvleela~e~~g~~v~~~K-Vdv-----------------------De~~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVV-LLSSDPKRTPEVSDN-PVMIGELLHEFPDYTWQVAI-ADL-----------------------EQSEAIGDR 86 (140)
T ss_dssp TCSSEEE-EECCCTTTCTTTTHH-HHHHHHHHTTCTTSCCEEEE-CCH-----------------------HHHHHHHHH
T ss_pred CCCCEEE-EEeCCcccCCcHHHH-HhHHHHHHHHcCCCeEEEEE-EEC-----------------------CCCHHHHHH
Confidence 3456766 555999 9999997 89999999988543255555 322 223456777
Q ss_pred hCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 112 IGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 112 ~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|||. ++|+ +++=+||+++...++
T Consensus 87 ygV~----------sIPT---lilFk~G~~v~~~~G 109 (140)
T 2qgv_A 87 FGAF----------RFPA---TLVFTGGNYRGVLNG 109 (140)
T ss_dssp HTCC----------SSSE---EEEEETTEEEEEEES
T ss_pred cCCc----------cCCE---EEEEECCEEEEEEec
Confidence 8876 4553 556699999988885
No 206
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.47 E-value=1.4e-07 Score=66.64 Aligned_cols=72 Identities=7% Similarity=0.044 Sum_probs=49.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.+++|||.|| ++||++|+.. .|.|.++.+++.+ .+.++- +..| ...++++.|+
T Consensus 40 ~~k~VVVdF~-A~WCgPCk~m-~PvleelA~e~~~-~v~f~k-VDVD-----------------------e~~e~a~~y~ 92 (160)
T 2av4_A 40 DERLVCIRFG-HDYDPDCMKM-DELLYKVADDIKN-FCVIYL-VDIT-----------------------EVPDFNTMYE 92 (160)
T ss_dssp SSSEEEEEEE-CTTSHHHHHH-HHHHHHHHHHHTT-TEEEEE-EETT-----------------------TCCTTTTTTT
T ss_pred CCCEEEEEEE-CCCChhHHHH-HHHHHHHHHHccC-CcEEEE-EECC-----------------------CCHHHHHHcC
Confidence 3567777777 9999999998 8999999999852 244444 4443 2345678888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEE
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLN 145 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~ 145 (164)
|. ++| +|++=++|+.+.+.
T Consensus 93 V~----------siP---T~~fFk~G~~v~vd 111 (160)
T 2av4_A 93 LY----------DPV---SVMFFYRNKHMMID 111 (160)
T ss_dssp CC----------SSE---EEEEEETTEEEEEE
T ss_pred CC----------CCC---EEEEEECCEEEEEe
Confidence 87 333 35444788876544
No 207
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.45 E-value=1.5e-07 Score=63.50 Aligned_cols=83 Identities=12% Similarity=0.044 Sum_probs=59.3
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCcc
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCEL 116 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 116 (164)
++|+.|| ++||++|+.. .|.|.++.+++. ++.++- |..|.. +++|++.
T Consensus 25 ~vvv~F~-a~wc~~C~~~-~p~l~~la~~~~--~v~f~k-vd~d~~--------------------------~~~~~v~- 72 (118)
T 3evi_A 25 WVIIHLY-RSSIPMCLLV-NQHLSLLARKFP--ETKFVK-AIVNSC--------------------------IQHYHDN- 72 (118)
T ss_dssp EEEEEEE-CTTSHHHHHH-HHHHHHHHHHCT--TSEEEE-EEGGGT--------------------------STTCCGG-
T ss_pred eEEEEEe-CCCChHHHHH-HHHHHHHHHHCC--CCEEEE-EEhHHh--------------------------HHHCCCC-
Confidence 6777777 9999999997 899999998873 577777 555531 1366776
Q ss_pred ccCCCCCCCCcceeEEEEEecCCcEEEEEeecC----CceeecCHHHHHhh
Q 045485 117 DLSDKPMGLGVRSRRYALLAENGVVKVLNLEEG----GAFTFSGAEDMLKA 163 (164)
Q Consensus 117 ~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~----~~~~~~~~~~~l~~ 163 (164)
++| ++++=++|+++....+-. ..++.+++|..|..
T Consensus 73 ---------~~P---T~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 73 ---------CLP---TIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp ---------GCS---EEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred ---------CCC---EEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 344 366668999999998732 23456666776653
No 208
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.43 E-value=7.7e-08 Score=71.58 Aligned_cols=71 Identities=8% Similarity=0.012 Sum_probs=51.2
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
++++||+|| ++||+.|... .|.+.+++.++ .++.++. |..+. ..+++.|++
T Consensus 120 ~k~vvV~F~-a~wC~~C~~l-~p~l~~la~~~--~~v~f~~-vd~~~------------------------~~l~~~~~i 170 (217)
T 2trc_P 120 VTTIVVNIY-EDGVRGCDAL-NSSLECLAAEY--PMVKFCK-IRASN------------------------TGAGDRFSS 170 (217)
T ss_dssp TCEEEEEEE-CTTSTTHHHH-HHHHHHHHTTC--TTSEEEE-EEHHH------------------------HTCSTTSCG
T ss_pred CcEEEEEEE-CCCCccHHHH-HHHHHHHHHHC--CCeEEEE-EECCc------------------------HHHHHHCCC
Confidence 467888887 9999999997 89999998887 3677777 54330 123356777
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
. ++ |+++++ ++|+++....+
T Consensus 171 ~----------~~--PTl~~~-~~G~~v~~~~G 190 (217)
T 2trc_P 171 D----------VL--PTLLVY-KGGELISNFIS 190 (217)
T ss_dssp G----------GC--SEEEEE-ETTEEEEEETT
T ss_pred C----------CC--CEEEEE-ECCEEEEEEeC
Confidence 6 34 447777 59999887775
No 209
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.42 E-value=1e-07 Score=78.13 Aligned_cols=69 Identities=13% Similarity=0.212 Sum_probs=49.4
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC-CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHh
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK-GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAI 112 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~-~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 112 (164)
.++.++|.|| ++||++|+.. .|.+.++++.+++. ++.++. +..+. ..+++.|
T Consensus 369 ~~k~vlv~f~-a~wC~~C~~~-~p~~~~l~~~~~~~~~v~~~~-id~~~------------------------~~~~~~~ 421 (481)
T 3f8u_A 369 ENKDVLIEFY-APWCGHCKNL-EPKYKELGEKLSKDPNIVIAK-MDATA------------------------NDVPSPY 421 (481)
T ss_dssp TTCEEEEEEE-CTTBHHHHHH-HHHHHHHHHHTTTCSSEEEEE-EETTS------------------------SCCCTTC
T ss_pred CCCcEEEEEe-cCcChhHHHh-hHHHHHHHHHhccCCCEEEEE-EECCc------------------------hhhHhhC
Confidence 3677887777 9999999998 99999999998754 444444 33322 1234567
Q ss_pred CCccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 113 GCELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 113 gv~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
++. ++ |++++++++|++
T Consensus 422 ~v~----------~~--Pt~~~~~~~~~~ 438 (481)
T 3f8u_A 422 EVR----------GF--PTIYFSPANKKL 438 (481)
T ss_dssp CCC----------SS--SEEEEECTTCTT
T ss_pred CCc----------cc--CEEEEEeCCCeE
Confidence 776 45 459999988875
No 210
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.35 E-value=3.8e-07 Score=63.12 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=50.9
Q ss_pred cEEEEEecCCCC--cCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 37 KAILFAVPGAFT--PTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 37 ~vvl~f~~~~~c--p~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
++||.|| ++|| ++|+.. .|-+.++.++|.+ .+.++- |.. |.+..++.+|||
T Consensus 35 ~vlVdF~-A~wCr~gpCk~i-aPvleela~e~~~-~v~~~K-Vdv-----------------------De~~~la~~ygV 87 (137)
T 2qsi_A 35 IVVLFFR-GDAVRFPEAADL-AVVLPELINAFPG-RLVAAE-VAA-----------------------EAERGLMARFGV 87 (137)
T ss_dssp EEEEEEC-CCTTTCTTHHHH-HHHHHHHHHTSTT-TEEEEE-ECG-----------------------GGHHHHHHHHTC
T ss_pred cEEEEEe-CCccCCCchhhH-HhHHHHHHHHccC-CcEEEE-EEC-----------------------CCCHHHHHHcCC
Confidence 6666665 9999 999997 8999999988852 344444 333 334557778888
Q ss_pred ccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 115 ELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 115 ~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
. ++|+ +++=+||+++...++
T Consensus 88 ~----------siPT---lilFkdG~~v~~~vG 107 (137)
T 2qsi_A 88 A----------VCPS---LAVVQPERTLGVIAK 107 (137)
T ss_dssp C----------SSSE---EEEEECCEEEEEEES
T ss_pred c----------cCCE---EEEEECCEEEEEEeC
Confidence 6 4553 555589999999886
No 211
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.30 E-value=7.3e-07 Score=71.27 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=50.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh-----CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS-----KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVF 108 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~-----~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (164)
++++++|.|| ++||+.|+.. .|.+.++++++++ .++.++. |..+ .+..+
T Consensus 21 ~~~~vlV~F~-a~wC~~C~~~-~p~~~~~a~~~~~~~~~~~~v~~~~-Vd~~-----------------------~~~~l 74 (382)
T 2r2j_A 21 NADVALVNFY-ADWCRFSQML-HPIFEEASDVIKEEFPNENQVVFAR-VDCD-----------------------QHSDI 74 (382)
T ss_dssp HCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTCC---CCEEEEE-EETT-----------------------TCHHH
T ss_pred cCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHHHhhcCCCCceEEEE-EECC-----------------------ccHHH
Confidence 3667777777 9999999997 9999999999863 2254444 4433 24567
Q ss_pred HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEE
Q 045485 109 TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVL 144 (164)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~ 144 (164)
+++|+|. ++| ++++ -++|+++..
T Consensus 75 ~~~~~v~----------~~P--t~~~-f~~G~~~~~ 97 (382)
T 2r2j_A 75 AQRYRIS----------KYP--TLKL-FRNGMMMKR 97 (382)
T ss_dssp HHHTTCC----------EES--EEEE-EETTEEEEE
T ss_pred HHhcCCC----------cCC--EEEE-EeCCcEeee
Confidence 8888886 454 3554 468887653
No 212
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.28 E-value=4.6e-07 Score=74.77 Aligned_cols=69 Identities=16% Similarity=0.276 Sum_probs=50.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++++|.|| ++||+.|+.. .|.+.++.+++...++.++. |..+. +..++++||
T Consensus 30 ~~~~~lv~F~-a~wC~~C~~~-~p~~~~~a~~~~~~~v~~~~-vd~~~-----------------------~~~l~~~~~ 83 (504)
T 2b5e_A 30 SHDLVLAEFF-APWCGHCKNM-APEYVKAAETLVEKNITLAQ-IDCTE-----------------------NQDLCMEHN 83 (504)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTTTCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred cCCeEEEEEE-CCCCHHHHHh-HHHHHHHHHHhccCCeEEEE-EECCC-----------------------CHHHHHhcC
Confidence 3566777776 9999999997 99999999998766677777 55332 345778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
|. ++| +.+++. +|++
T Consensus 84 v~----------~~P--t~~~~~-~g~~ 98 (504)
T 2b5e_A 84 IP----------GFP--SLKIFK-NSDV 98 (504)
T ss_dssp CC----------SSS--EEEEEE-TTCT
T ss_pred CC----------cCC--EEEEEe-CCcc
Confidence 86 454 477775 4654
No 213
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.25 E-value=1.4e-07 Score=69.87 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=27.5
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+++++|+.|| ..|||+|... .+.+.++.+ .++.++.
T Consensus 85 ~~k~~vv~F~-d~~Cp~C~~~-~~~l~~l~~----~~v~v~~ 120 (216)
T 1eej_A 85 QEKHVITVFT-DITCGYCHKL-HEQMADYNA----LGITVRY 120 (216)
T ss_dssp TCCEEEEEEE-CTTCHHHHHH-HTTHHHHHH----TTEEEEE
T ss_pred CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHh----CCcEEEE
Confidence 4666777776 9999999997 788877643 4777776
No 214
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.25 E-value=5.2e-07 Score=74.18 Aligned_cols=68 Identities=13% Similarity=0.097 Sum_probs=48.5
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC-C------CcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK-G------VDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~-~------v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
++++||.|| ++||++|+.. .|.+.++++++.+. + +.++. |..|. +..
T Consensus 42 ~k~VlV~Fy-A~WC~pCk~~-~P~l~~la~~~~~~~g~~~~~~v~f~~-VD~d~-----------------------~~~ 95 (470)
T 3qcp_A 42 LCPWIVLFY-NDGCGACRRY-ASTFSKFAGGLKVEHGKDALQIATAAA-VNCAS-----------------------EVD 95 (470)
T ss_dssp GSCEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCCSSCSSGGGGCEEEE-EETTT-----------------------CHH
T ss_pred CCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHHhhhcccccCceEEEEE-EECCC-----------------------CHH
Confidence 367888887 9999999998 99999999988633 2 66666 55432 245
Q ss_pred HHHHhCCccccCCCCCCCCcceeEEEEEecCCc
Q 045485 108 FTKAIGCELDLSDKPMGLGVRSRRYALLAENGV 140 (164)
Q Consensus 108 ~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~ 140 (164)
++++|+|. ++ |++++++++|.
T Consensus 96 la~~y~V~----------~~--PTlilf~~gg~ 116 (470)
T 3qcp_A 96 LCRKYDIN----------FV--PRLFFFYPRDS 116 (470)
T ss_dssp HHHHTTCC----------SS--CEEEEEEESSC
T ss_pred HHHHcCCC----------cc--CeEEEEECCCc
Confidence 67777776 34 44777776553
No 215
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.24 E-value=3.2e-07 Score=79.47 Aligned_cols=74 Identities=11% Similarity=0.035 Sum_probs=54.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.+++++|.|| ++||++|+.. .|.+.+++++++. ++.++. |..+. ...++++||
T Consensus 674 ~~~~v~v~F~-a~wC~~C~~~-~p~~~~la~~~~~-~~~~~~-vd~~~-----------------------~~~~~~~~~ 726 (780)
T 3apo_A 674 GKTHWVVDFY-APWSGPSQNF-APEFELLARMIKG-KVRAGK-VDCQA-----------------------YPQTCQKAG 726 (780)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTT-TCEEEE-EETTT-----------------------CHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHhcC-CceEEE-EECCC-----------------------CHHHHHhcC
Confidence 3677888887 9999999997 9999999998864 566666 55432 245778888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+. ++ |+++++ ++|+++....+
T Consensus 727 v~----------~~--Pt~~~~-~~g~~~~~~~G 747 (780)
T 3apo_A 727 IK----------AY--PSVKLY-QYERAKKSIWE 747 (780)
T ss_dssp CC----------SS--SEEEEE-EEETTTTEEEE
T ss_pred CC----------cC--CEEEEE-cCCCccccccC
Confidence 86 44 457777 78877655554
No 216
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.24 E-value=9.1e-07 Score=72.47 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=50.7
Q ss_pred CcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 36 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
++++|.|| ++||+.|+.. .|.+.++++++.+. +.++. |..+. +..++++|||.
T Consensus 22 ~~~lv~F~-a~wC~~C~~~-~p~~~~~a~~~~~~-v~~~~-vd~~~-----------------------~~~l~~~~~v~ 74 (481)
T 3f8u_A 22 GLMLVEFF-APWCGHAKRL-APEYEAAATRLKGI-VPLAK-VDCTA-----------------------NTNTCNKYGVS 74 (481)
T ss_dssp SEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTT-CCEEE-EETTT-----------------------CHHHHHHTTCC
T ss_pred CeEEEEEE-CCCCHHHHHh-HHHHHHHHHHhcCc-eEEEE-EECCC-----------------------CHHHHHhcCCC
Confidence 66676776 9999999997 99999999998654 66666 55443 34577888886
Q ss_pred cccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 116 LDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 116 ~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
++| +.+++ ++|++...+.
T Consensus 75 ----------~~P--tl~~~-~~g~~~~~~~ 92 (481)
T 3f8u_A 75 ----------GYP--TLKIF-RDGEEAGAYD 92 (481)
T ss_dssp ----------EES--EEEEE-ETTEEEEECC
T ss_pred ----------CCC--EEEEE-eCCceeeeec
Confidence 444 34444 7887665544
No 217
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.23 E-value=8e-07 Score=76.98 Aligned_cols=76 Identities=7% Similarity=0.062 Sum_probs=54.6
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchH
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVF 108 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~ 108 (164)
+.++ .+++++|.|| ++||+.|... +|.+.++++++++ .+.++. |..+.. ..+
T Consensus 450 ~~~~-~~~~vlv~F~-a~wC~~c~~~-~p~~~~~a~~~~~-~v~~~~-vd~~~~-----------------------~~~ 501 (780)
T 3apo_A 450 FPAS-DKEPWLVDFF-APWSPPSRAL-LPELRKASTLLYG-QLKVGT-LDCTIH-----------------------EGL 501 (780)
T ss_dssp SCTT-CCSCEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTT-TCEEEE-EETTTC-----------------------HHH
T ss_pred HHHc-CCCeEEEEEE-CCCCHHHHHH-hHHHHHHHHHhcC-CeEEEE-EeCCCC-----------------------HHH
Confidence 3345 5788888888 9999999997 9999999999863 476666 655421 236
Q ss_pred HHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 109 TKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 109 ~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
++.||+. ++ |+++++ ++|++ +.+.
T Consensus 502 ~~~~~v~----------~~--Pt~~~~-~~g~~-~~~~ 525 (780)
T 3apo_A 502 CNMYNIQ----------AY--PTTVVF-NQSSI-HEYE 525 (780)
T ss_dssp HHHTTCC----------SS--SEEEEE-ETTEE-EEEC
T ss_pred HHHcCCC----------cC--CeEEEE-cCCce-eeec
Confidence 7788886 34 558888 55776 4443
No 218
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.21 E-value=9.2e-07 Score=65.41 Aligned_cols=68 Identities=13% Similarity=0.041 Sum_probs=45.9
Q ss_pred CCcE-EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 35 NKKA-ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 35 g~~v-vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
++++ ++.|| ++||+.|... .|.++++..++ .++.++. +..+ .+..++++||
T Consensus 135 ~~~~~~v~F~-a~wC~~C~~~-~~~~~~~~~~~--~~v~~~~-vd~~-----------------------~~~~l~~~~~ 186 (229)
T 2ywm_A 135 DIPIEIWVFV-TTSCGYCPSA-AVMAWDFALAN--DYITSKV-IDAS-----------------------ENQDLAEQFQ 186 (229)
T ss_dssp CSCEEEEEEE-CTTCTTHHHH-HHHHHHHHHHC--TTEEEEE-EEGG-----------------------GCHHHHHHTT
T ss_pred CCCeEEEEEE-CCCCcchHHH-HHHHHHHHHHC--CCeEEEE-EECC-----------------------CCHHHHHHcC
Confidence 3455 55566 9999999997 89999998876 3566555 4433 2345788888
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
+. ++| ++++ +|++ ..+.
T Consensus 187 v~----------~~P--t~~~---~G~~-~~~~ 203 (229)
T 2ywm_A 187 VV----------GVP--KIVI---NKGV-AEFV 203 (229)
T ss_dssp CC----------SSS--EEEE---GGGT-EEEE
T ss_pred Cc----------ccC--EEEE---CCEE-EEee
Confidence 86 454 4655 7884 3344
No 219
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.20 E-value=7.7e-07 Score=63.21 Aligned_cols=44 Identities=9% Similarity=0.080 Sum_probs=32.4
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+.+.+- .++.+|+.|| ..|||.|... .+.+.++.+++. ++.++.
T Consensus 15 ~~~G~~-~a~v~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~--~v~~~~ 58 (175)
T 3gyk_A 15 PVLGNP-EGDVTVVEFF-DYNCPYCRRA-MAEVQGLVDADP--NVRLVY 58 (175)
T ss_dssp CEEECT-TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHCT--TEEEEE
T ss_pred CCcCCC-CCCEEEEEEE-CCCCccHHHH-HHHHHHHHHhCC--CEEEEE
Confidence 566666 5676666666 9999999997 799998887653 355444
No 220
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.11 E-value=6.7e-07 Score=64.74 Aligned_cols=39 Identities=15% Similarity=0.133 Sum_probs=29.4
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+++++|+.|| ..|||.|... .+.+.++.+++.+ ++.+.-
T Consensus 24 ~~~~~vv~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~~~~ 62 (195)
T 3hd5_A 24 PGKIEVLEFF-AYTCPHCAAI-EPMVEDWAKTAPQ-DVVLKQ 62 (195)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHTCCT-TEEEEE
T ss_pred CCCeEEEEEE-CCCCccHHHh-hHHHHHHHHHCCC-CeEEEE
Confidence 3566777776 9999999997 7999888877753 455554
No 221
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.11 E-value=8.5e-07 Score=69.99 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=29.0
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK 69 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~ 69 (164)
.++.++|.|| ++||+.|+.. .|.+.++.+++++.
T Consensus 266 ~~k~~lv~f~-a~wC~~C~~~-~p~~~~la~~~~~~ 299 (361)
T 3uem_A 266 EKKNVFVEFY-APWCGHCKQL-APIWDKLGETYKDH 299 (361)
T ss_dssp TTCEEEEEEE-CTTCHHHHHH-HHHHHHHHHHTTTC
T ss_pred CCCcEEEEEe-cCcCHhHHHH-HHHHHHHHHHhccC
Confidence 4677777777 9999999998 99999999998754
No 222
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.02 E-value=8e-07 Score=73.31 Aligned_cols=40 Identities=15% Similarity=0.299 Sum_probs=31.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhC--CCcEEE
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSK--GVDIVA 75 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~--~v~vi~ 75 (164)
.++++||.|| ++||++|+.. .|.+.++.+++... ++.++.
T Consensus 375 ~~k~vlv~F~-a~wC~~C~~~-~p~~~~l~~~~~~~~~~v~~~~ 416 (504)
T 2b5e_A 375 PKKDVLVLYY-APWCGHCKRL-APTYQELADTYANATSDVLIAK 416 (504)
T ss_dssp TTCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCEEEEEE-CCCChhHHHH-hHHHHHHHHHhhccCCcEEEEE
Confidence 4678888888 9999999998 99999999998732 444444
No 223
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.00 E-value=4.8e-06 Score=60.04 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=27.8
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
++.+|+.|| ..|||.|... .+.+.++.+++.. .+.+..
T Consensus 22 ~~~~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~~~~ 59 (195)
T 2znm_A 22 GKIEVLEFF-GYFCVHCHHF-DPLLLKLGKALPS-DAYLRT 59 (195)
T ss_dssp SSEEEEEEE-CTTSCCTTSS-CHHHHHHHHHSCT-TEEEEE
T ss_pred CCcEEEEEE-CCCChhHHHH-hHHHHHHHHHCCC-ceEEEE
Confidence 565666666 8999999998 7999988877642 454444
No 224
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.94 E-value=3.1e-06 Score=55.87 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=20.3
Q ss_pred hcCCCcEEEEEecCCCCcCCCcCchhhHHHh
Q 045485 32 LTSNKKAILFAVPGAFTPTCSQKHLPGFVEK 62 (164)
Q Consensus 32 ~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~ 62 (164)
..+++++++ || ++|||+|... .+.|+++
T Consensus 16 ~~~~~~vv~-f~-a~~C~~C~~~-~~~l~~~ 43 (116)
T 2e7p_A 16 LASSAPVVV-FS-KTYCGYCNRV-KQLLTQV 43 (116)
T ss_dssp HHTSSSEEE-EE-CTTCHHHHHH-HHHHHHH
T ss_pred HHcCCCEEE-EE-CCCChhHHHH-HHHHHHc
Confidence 335666555 66 9999999986 7777665
No 225
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.93 E-value=1.3e-06 Score=58.76 Aligned_cols=76 Identities=9% Similarity=-0.018 Sum_probs=41.2
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHH-HhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL-KSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIG 113 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~-~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (164)
.+.+||.|| +.||++|+.. -+.+...++.- +.+.+.++- +..+.. ....++..|+
T Consensus 18 ~~~~LV~F~-A~wC~~Ck~~-~~~i~~~~~~~a~~~~~~l~~-vdv~~~---------------------~~~~la~~~~ 73 (116)
T 3dml_A 18 AELRLLMFE-QPGCLYCARW-DAEIAPQYPLTDEGRAAPVQR-LQMRDP---------------------LPPGLELARP 73 (116)
T ss_dssp -CEEEEEEE-CTTCHHHHHH-HHHTTTTGGGSHHHHHSCEEE-EETTSC---------------------CCTTCBCSSC
T ss_pred CCCEEEEEE-CCCCHHHHHH-HHHHHhhHHHhhhcccceEEE-EECCCC---------------------CchhHHHHCC
Confidence 456777777 9999999974 33222221110 001123333 323221 1134556677
Q ss_pred CccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 114 CELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 114 v~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
|. ++ |+.++++ +|+.+....+
T Consensus 74 V~----------g~--PT~i~f~-~G~ev~Ri~G 94 (116)
T 3dml_A 74 VT----------FT--PTFVLMA-GDVESGRLEG 94 (116)
T ss_dssp CC----------SS--SEEEEEE-TTEEEEEEEC
T ss_pred CC----------CC--CEEEEEE-CCEEEeeecC
Confidence 75 34 5588888 9999887775
No 226
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.87 E-value=3.4e-05 Score=54.18 Aligned_cols=75 Identities=8% Similarity=-0.055 Sum_probs=43.2
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHH
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTK 110 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 110 (164)
.+|+++|+|+ ++||+.|... -... .++.+.+. .++..+. +..++++ . ..+.+
T Consensus 41 ~~K~vlvd~~-a~wC~~C~~m-e~~vf~d~~V~~~l~-~~fv~v~-~d~~~~~-~--------------------~~l~~ 95 (153)
T 2dlx_A 41 QNKWLMINIQ-NVQDFACQCL-NRDVWSNEAVKNIIR-EHFIFWQ-VYHDSEE-G--------------------QRYIQ 95 (153)
T ss_dssp HTCEEEEEEE-CSCTTTHHHH-HHHTTTCHHHHHHHH-HTEEEEE-EESSSHH-H--------------------HHHHH
T ss_pred cCCeEEEEEE-CCCCHhHHHH-HHHhcCCHHHHHHHH-cCeEEEE-EecCCHh-H--------------------HHHHH
Confidence 3788888887 9999999863 2221 12222222 2444444 4444432 1 23445
Q ss_pred HhCCccccCCCCCCCCcceeEEEEEecC-CcEEEEE
Q 045485 111 AIGCELDLSDKPMGLGVRSRRYALLAEN-GVVKVLN 145 (164)
Q Consensus 111 ~~gv~~~~~~~~~~~~~~~p~~~lid~~-G~I~~~~ 145 (164)
.|++. ++ |++++||++ |+.+..+
T Consensus 96 ~y~v~----------~~--P~~~fld~~~G~~l~~~ 119 (153)
T 2dlx_A 96 FYKLG----------DF--PYVSILDPRTGQKLVEW 119 (153)
T ss_dssp HHTCC----------SS--SEEEEECTTTCCCCEEE
T ss_pred HcCCC----------CC--CEEEEEeCCCCcEeeec
Confidence 67765 34 559999998 8665553
No 227
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.80 E-value=6.2e-06 Score=60.74 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=25.1
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
++.+|+.|| ..|||+|... .+.+.++. +.++.+..
T Consensus 86 ~k~~vv~F~-d~~Cp~C~~~-~~~l~~~~----~~~v~v~~ 120 (211)
T 1t3b_A 86 EKHVVTVFM-DITCHYCHLL-HQQLKEYN----DLGITVRY 120 (211)
T ss_dssp CSEEEEEEE-CTTCHHHHHH-HTTHHHHH----HTTEEEEE
T ss_pred CCEEEEEEE-CCCCHhHHHH-HHHHHHHH----hCCcEEEE
Confidence 455666666 9999999997 68877743 34677655
No 228
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.77 E-value=1.5e-05 Score=59.95 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=24.9
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+++.+|+.|| ..|||+|... .+.+.++.++ .++.+..
T Consensus 96 ~ak~~v~~F~-D~~Cp~C~~~-~~~l~~~~~~---g~v~v~~ 132 (241)
T 1v58_A 96 DAPVIVYVFA-DPFCPYCKQF-WQQARPWVDS---GKVQLRT 132 (241)
T ss_dssp TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHT---TSEEEEE
T ss_pred CCCeEEEEEE-CCCChhHHHH-HHHHHHHHhC---CcEEEEE
Confidence 3455566665 9999999997 6877765542 3466554
No 229
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.77 E-value=3.1e-06 Score=61.04 Aligned_cols=37 Identities=24% Similarity=0.211 Sum_probs=27.0
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIV 74 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi 74 (164)
++.+|+.|| ..|||.|... .+.+.++.+++.+ ++.+.
T Consensus 25 ~~~~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~~~ 61 (192)
T 3h93_A 25 GKIEVVELF-WYGCPHCYAF-EPTIVPWSEKLPA-DVHFV 61 (192)
T ss_dssp TSEEEEEEE-CTTCHHHHHH-HHHHHHHHHTCCT-TEEEE
T ss_pred CCCEEEEEE-CCCChhHHHh-hHHHHHHHHhCCC-CeEEE
Confidence 566666666 9999999997 7888888776643 44444
No 230
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.66 E-value=5.2e-05 Score=53.63 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=33.7
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCC-CcEEE
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKG-VDIVA 75 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~-v~vi~ 75 (164)
+.+.+- .++.+|+.|| ..+||.|... .+.+.++.+++.+.| ++++.
T Consensus 20 ~~~G~~-~a~v~i~~f~-D~~Cp~C~~~-~~~~~~~~~~~~~~~~v~~~~ 66 (175)
T 1z6m_A 20 LHIGES-NAPVKMIEFI-NVRCPYCRKW-FEESEELLAQSVKSGKVERII 66 (175)
T ss_dssp EEESCT-TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHHHTTSEEEEE
T ss_pred cccCCC-CCCeEEEEEE-CCCCcchHHH-HHHHHHHHHHHhhCCcEEEEE
Confidence 566666 5665566665 8999999997 799988888885443 66655
No 231
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.59 E-value=4.5e-05 Score=47.08 Aligned_cols=24 Identities=13% Similarity=0.052 Sum_probs=17.6
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHH
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSA 64 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~ 64 (164)
+++|| ++|||+|... .+.++++.+
T Consensus 4 ~~~f~-~~~C~~C~~~-~~~l~~~~~ 27 (80)
T 2k8s_A 4 KAIFY-HAGCPVCVSA-EQAVANAID 27 (80)
T ss_dssp EEEEE-ECSCHHHHHH-HHHHHHHSC
T ss_pred eEEEe-CCCCCchHHH-HHHHHHHHH
Confidence 44555 8999999986 777766543
No 232
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.59 E-value=0.00012 Score=58.16 Aligned_cols=42 Identities=12% Similarity=-0.004 Sum_probs=26.8
Q ss_pred CCcEEEEEecCCCCcCCCcCchh-------hHHHhHHHHHhCCCcEEEEEecC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLP-------GFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~-------~l~~~~~~~~~~~v~vi~~is~d 80 (164)
++.++|.|| ++||+.|.. .+ .+.+....++..++.+.. |..+
T Consensus 30 ~~~vlV~Fy-ApWC~~~~~--~~~l~~~~p~~e~~a~~~~~~~v~~~~-Vd~~ 78 (367)
T 3us3_A 30 YEVLALLYH-EPPEDDKAS--QRQFEMEELILELAAQVLEDKGVGFGL-VDSE 78 (367)
T ss_dssp CSEEEEEEE-CCCCSSHHH--HHHHHHHHHHHHHHHHHHTTTTEEEEE-EETT
T ss_pred CCeEEEEEE-CCCchhHHH--hhhhccccHHHHHHHHHhhcCCceEEE-EeCc
Confidence 466666676 999999843 34 566777777654565555 4443
No 233
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.56 E-value=6.3e-05 Score=55.37 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=25.7
Q ss_pred CCcEEEEEe----cCCCCcCCCcCchhhHHHhHHHHHh-CCCcEEE
Q 045485 35 NKKAILFAV----PGAFTPTCSQKHLPGFVEKSAELKS-KGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~----~~~~cp~C~~~~l~~l~~~~~~~~~-~~v~vi~ 75 (164)
.++++|.|| |+.||+.|... +|.+.++++++.+ ..+.+..
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~-~~~~~~~a~~~~~~~~v~~~~ 64 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEEL-LKETVEVIGEAVGQDKIKLDI 64 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHH-HHHHHHHHHHHHCTTTEEEEE
T ss_pred cCCeEEEEEccCCCCcccHHHHHH-HHHHHHHHhccCCCCceEEEE
Confidence 456777887 46667777775 7777777766642 3354444
No 234
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.34 E-value=5.4e-05 Score=48.04 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=15.3
Q ss_pred EEEEecCCCCcCCCcCchhhHHHh
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEK 62 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~ 62 (164)
|+.|| ++||++|... .+.|.++
T Consensus 3 vv~f~-a~~C~~C~~~-~~~L~~~ 24 (87)
T 1ttz_A 3 LTLYQ-RDDCHLCDQA-VEALAQA 24 (87)
T ss_dssp EEEEE-CSSCHHHHHH-HHHHHHT
T ss_pred EEEEE-CCCCchHHHH-HHHHHHH
Confidence 44555 9999999975 5555444
No 235
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.29 E-value=6.3e-05 Score=53.92 Aligned_cols=38 Identities=16% Similarity=0.159 Sum_probs=26.4
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
++.+|+.|| ..+||.|... .+.+.++.+++.. .+.+..
T Consensus 25 a~v~i~~f~-d~~Cp~C~~~-~~~l~~l~~~~~~-~v~~~~ 62 (193)
T 2rem_A 25 GKIEVVEIF-GYTCPHCAHF-DSKLQAWGARQAK-DVRFTL 62 (193)
T ss_dssp TCEEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCT-TEEEEE
T ss_pred CCeEEEEEE-CCCChhHhhh-hHHHHHHHHhcCC-ceEEEE
Confidence 444555555 8999999997 7999888776642 455443
No 236
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.15 E-value=0.00041 Score=49.84 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=24.9
Q ss_pred CcEEEEEecC-------CCCcCCCcCchhhHHHhHHHHH
Q 045485 36 KKAILFAVPG-------AFTPTCSQKHLPGFVEKSAELK 67 (164)
Q Consensus 36 ~~vvl~f~~~-------~~cp~C~~~~l~~l~~~~~~~~ 67 (164)
.++||.|| + .||++|+.- .|.+.++.+++.
T Consensus 38 ~~vvV~F~-A~~~~~~~~wCgpCk~l-~P~~e~lA~~~~ 74 (178)
T 3ga4_A 38 YFNILYIT-MRGTNSNGMSCQLCHDF-EKTYHAVADVIR 74 (178)
T ss_dssp CEEEEEEE-CCSBCTTSCBCHHHHHH-HHHHHHHHHHHH
T ss_pred CcEEEEEe-CCCCCCCCCCChhHHHH-HHHHHHHHHHhh
Confidence 35666666 6 499999997 899999999996
No 237
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.15 E-value=0.00063 Score=56.40 Aligned_cols=40 Identities=8% Similarity=-0.053 Sum_probs=26.9
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
.+.|.+|+++|||+|+.. .|.++++..++. ++.+.. +..+
T Consensus 118 ~~~i~~f~a~~C~~C~~~-~~~l~~~a~~~~--~v~~~~-vd~~ 157 (521)
T 1hyu_A 118 DFEFETYYSLSCHNCPDV-VQALNLMAVLNP--RIKHTA-IDGG 157 (521)
T ss_dssp CEEEEEEECTTCSSHHHH-HHHHHHHHHHCT--TEEEEE-EETT
T ss_pred CcceEEEECCCCcCcHHH-HHHHHHHHhHcC--ceEEEE-Eech
Confidence 344455559999999986 898888866652 555554 4433
No 238
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.15 E-value=5.7e-05 Score=46.81 Aligned_cols=33 Identities=12% Similarity=-0.033 Sum_probs=24.8
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
|++|+ ++|||.|... .+.|+++..++ .++.+..
T Consensus 3 v~~f~-~~~C~~C~~~-~~~l~~l~~~~--~~i~~~~ 35 (85)
T 1ego_A 3 TVIFG-RSGCPYCVRA-KDLAEKLSNER--DDFQYQY 35 (85)
T ss_dssp EEEEC-CTTSTHHHHH-HHHHHHHHHHH--SSCEEEE
T ss_pred EEEEe-CCCCCCHHHH-HHHHHHHHhcC--CCceEEE
Confidence 44554 8999999987 88888887665 5777666
No 239
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.12 E-value=0.00044 Score=50.56 Aligned_cols=55 Identities=13% Similarity=0.066 Sum_probs=34.8
Q ss_pred CcEEEEEecCC-CCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 36 KKAILFAVPGA-FTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 36 ~~vvl~f~~~~-~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
++++|++|+++ ||+.|... .|.+.++.+. ...+.++. +..+.++. .+..+++++.
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~-~~~~~~la~~--~~~v~~~~-vd~~~~~~-~~~~~~~~v~ 77 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQL-KQLVQELSEL--TDKLSYEI-VDFDTPEG-KELAKRYRID 77 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHH-HHHHHHHHTT--CTTEEEEE-EETTSHHH-HHHHHHTTCC
T ss_pred CCeEEEEEecCCCCchhHHH-HHHHHHHHhh--CCceEEEE-EeCCCccc-HHHHHHcCCC
Confidence 34554445589 99999986 8888887643 23466655 66665322 3455666654
No 240
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.08 E-value=0.00045 Score=42.29 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=21.3
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
|+.|+ ++|||.|... .+.|. +.++.+.. +..+.
T Consensus 3 v~~f~-~~~C~~C~~~-~~~l~-------~~~i~~~~-vdi~~ 35 (81)
T 1h75_A 3 ITIYT-RNDCVQCHAT-KRAME-------NRGFDFEM-INVDR 35 (81)
T ss_dssp EEEEE-CTTCHHHHHH-HHHHH-------HTTCCCEE-EETTT
T ss_pred EEEEc-CCCChhHHHH-HHHHH-------HCCCCeEE-EECCC
Confidence 34455 8999999975 54444 34677666 66653
No 241
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.01 E-value=7.6e-05 Score=48.37 Aligned_cols=38 Identities=8% Similarity=0.101 Sum_probs=23.7
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
..+.|++|+ ++|||+|... .+.|.++. .++.+.- +..+
T Consensus 15 ~~~~v~~f~-~~~C~~C~~~-~~~L~~l~-----~~i~~~~-vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFT-KAPCPLCDEA-KEVLQPYK-----DRFILQE-VDIT 52 (100)
T ss_dssp CCCEEEEEE-CSSCHHHHHH-HHHTSTTS-----SSSEEEE-EETT
T ss_pred CCCEEEEEe-CCCCcchHHH-HHHHHHhh-----hCCeEEE-EECC
Confidence 445666665 8999999975 55555432 3455555 5554
No 242
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.83 E-value=0.00083 Score=40.22 Aligned_cols=32 Identities=6% Similarity=0.130 Sum_probs=20.2
Q ss_pred EEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC
Q 045485 40 LFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND 81 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~ 81 (164)
+.|+ ++|||.|... .+.|++ .|+.+.. +..+.
T Consensus 4 ~~y~-~~~C~~C~~~-~~~l~~-------~~i~~~~-~di~~ 35 (75)
T 1r7h_A 4 TLYT-KPACVQCTAT-KKALDR-------AGLAYNT-VDISL 35 (75)
T ss_dssp EEEE-CTTCHHHHHH-HHHHHH-------TTCCCEE-EETTT
T ss_pred EEEe-CCCChHHHHH-HHHHHH-------cCCCcEE-EECCC
Confidence 3444 8999999975 554443 4666655 55553
No 243
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.83 E-value=0.00058 Score=45.00 Aligned_cols=38 Identities=5% Similarity=0.134 Sum_probs=26.1
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
..|+.|| ++|||+|... .+.|.++.++ .++.+.- +..|
T Consensus 30 ~~vv~y~-~~~C~~C~~a-~~~L~~l~~e---~~i~~~~-vDId 67 (107)
T 2fgx_A 30 RKLVVYG-REGCHLCEEM-IASLRVLQKK---SWFELEV-INID 67 (107)
T ss_dssp CCEEEEE-CSSCHHHHHH-HHHHHHHHHH---SCCCCEE-EETT
T ss_pred cEEEEEe-CCCChhHHHH-HHHHHHHHHh---cCCeEEE-EECC
Confidence 3455665 8999999986 7777777655 3566555 5554
No 244
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.33 E-value=0.0098 Score=36.92 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=27.2
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHh-CC
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENL-GI 94 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~-~~ 94 (164)
++.|+ ++|||.|..- .+.|.+ .++.+.. +..+ ++...++.+.+ +.
T Consensus 8 v~~y~-~~~C~~C~~~-~~~L~~-------~~i~~~~-vdv~-~~~~~~l~~~~~~~ 53 (89)
T 2klx_A 8 IILYT-RPNCPYCKRA-RDLLDK-------KGVKYTD-IDAS-TSLRQEMVQRANGR 53 (89)
T ss_dssp EEEES-CSCCTTTHHH-HHHHHH-------HTCCEEE-ECSC-HHHHHHHHHHHHSS
T ss_pred EEEEE-CCCChhHHHH-HHHHHH-------cCCCcEE-EECC-HHHHHHHHHHhCCC
Confidence 33444 8999999975 444332 3566665 6666 54455565555 54
No 245
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=96.24 E-value=0.001 Score=51.38 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=25.8
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHH
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAE 65 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~ 65 (164)
+.+++.. .+..++.|| ++|||+|+.. .|.++++.++
T Consensus 190 ~~la~~l-~~~~vV~F~-A~WC~~Ck~l-~p~le~lA~~ 225 (291)
T 3kp9_A 190 VGLAAHL-RQIGGTMYG-AYWCPHCQDQ-KELFGAAFDQ 225 (291)
T ss_dssp HHHHHHH-HHTTCEEEE-CTTCHHHHHH-HHHHGGGGGG
T ss_pred HHHHHHh-CCCCEEEEE-CCCCHHHHHH-HHHHHHHHHH
Confidence 5666654 333456776 9999999997 7888887543
No 246
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.04 E-value=0.0066 Score=47.48 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=28.8
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN 80 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d 80 (164)
.++|+|+ +.||+.|... .+.+.+++.+++.+ +.++. +..+
T Consensus 137 ~~~v~F~-~~~~~~~~~~-~~~~~~~A~~~~~~-i~f~~-vd~~ 176 (361)
T 3uem_A 137 THILLFL-PKSVSDYDGK-LSNFKTAAESFKGK-ILFIF-IDSD 176 (361)
T ss_dssp EEEEEEC-CSSSSSHHHH-HHHHHHHHGGGTTT-CEEEE-ECTT
T ss_pred cEEEEEE-eCCchhHHHH-HHHHHHHHHHccCc-eEEEE-ecCC
Confidence 3455555 8999999997 99999999999643 54444 4433
No 247
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=95.90 E-value=0.0014 Score=42.05 Aligned_cols=22 Identities=9% Similarity=0.224 Sum_probs=15.3
Q ss_pred EEEEecCCCCcCCCcCchhhHHHh
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEK 62 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~ 62 (164)
|++|+ ++|||+|... .+.|.++
T Consensus 14 v~~f~-~~~C~~C~~~-~~~L~~~ 35 (105)
T 1kte_A 14 VVVFI-KPTCPFCRKT-QELLSQL 35 (105)
T ss_dssp EEEEE-CSSCHHHHHH-HHHHHHS
T ss_pred EEEEE-cCCCHhHHHH-HHHHHHc
Confidence 44555 8999999975 5555543
No 248
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=95.77 E-value=0.0058 Score=42.28 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=19.3
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHh
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEK 62 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~ 62 (164)
.++.+|+.|+ -.+||+|.+. .+.+.++
T Consensus 13 ~a~~~vv~f~-D~~Cp~C~~~-~~~l~~l 39 (147)
T 3gv1_A 13 NGKLKVAVFS-DPDCPFCKRL-EHEFEKM 39 (147)
T ss_dssp TCCEEEEEEE-CTTCHHHHHH-HHHHTTC
T ss_pred CCCEEEEEEE-CCCChhHHHH-HHHHhhc
Confidence 3555566665 8999999986 6776554
No 249
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.57 E-value=0.035 Score=40.92 Aligned_cols=51 Identities=18% Similarity=0.092 Sum_probs=37.2
Q ss_pred eEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEeecCCceeecCHHHHHhh
Q 045485 98 VLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLEEGGAFTFSGAEDMLKA 163 (164)
Q Consensus 98 ~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~~ 163 (164)
+....|.+..+++.|||. ++ |+.++++++|++....... .+++.+...|+.
T Consensus 187 v~~~~~~~~~l~~~f~v~----------~~--Pslvl~~~~g~~~~~~~~~---~~r~~~~~~l~~ 237 (244)
T 3q6o_A 187 VRRVLNTEANVVRKFGVT----------DF--PSCYLLFRNGSVSRVPVLM---ESRSFYTAYLQR 237 (244)
T ss_dssp EEEEETTCHHHHHHHTCC----------CS--SEEEEEETTSCEEECCCSS---SSHHHHHHHHHT
T ss_pred EEEEeCchHHHHHHcCCC----------CC--CeEEEEeCCCCeEeecccc---ccHHHHHHHHHh
Confidence 666677778999999997 34 6699999999998887642 234455555543
No 250
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.39 E-value=0.015 Score=36.93 Aligned_cols=38 Identities=5% Similarity=0.095 Sum_probs=23.7
Q ss_pred CCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHH
Q 045485 45 GAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKEN 91 (164)
Q Consensus 45 ~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~ 91 (164)
.+|||+|.+- - +-|.++|+..-- +..+ +++..+.+.+.
T Consensus 11 ~~~Cp~C~~a-K-------~~L~~~gi~y~~-idi~~d~~~~~~~~~~ 49 (92)
T 2lqo_A 11 TSWCGYCLRL-K-------TALTANRIAYDE-VDIEHNRAAAEFVGSV 49 (92)
T ss_dssp CTTCSSHHHH-H-------HHHHHTTCCCEE-EETTTCHHHHHHHHHH
T ss_pred CCCCHhHHHH-H-------HHHHhcCCceEE-EEcCCCHHHHHHHHHH
Confidence 7899999973 2 234557887766 6665 45544444443
No 251
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.36 E-value=0.0036 Score=45.04 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=27.0
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIV 74 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi 74 (164)
++.+|+.|| ..|||.|... .+.+.++.+++.+ .+.+.
T Consensus 24 ~~v~vv~f~-d~~Cp~C~~~-~~~l~~~~~~~~~-~v~~~ 60 (193)
T 3hz8_A 24 GKVEVLEFF-GYFCPHCAHL-EPVLSKHAKSFKD-DMYLR 60 (193)
T ss_dssp TSEEEEEEE-CTTCHHHHHH-HHHHHHHHTTCCT-TEEEE
T ss_pred CCcEEEEEE-CCCChhHHHH-HHHHHHHHHHCCC-CeEEE
Confidence 566666676 8999999997 7888888776654 34433
No 252
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.32 E-value=0.046 Score=35.37 Aligned_cols=58 Identities=22% Similarity=0.161 Sum_probs=32.9
Q ss_pred CCCcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCCCCceEEEE
Q 045485 34 SNKKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGINDEVLLLS 102 (164)
Q Consensus 34 ~g~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~~~~~~~l~ 102 (164)
+...++|+.. + +|||.|..- .+.| .+.|+.+.. +..+ +++...++.+..|.. .+|.+.
T Consensus 13 ~~~~vvvy~~-g~~~~~~Cp~C~~a-k~~L-------~~~~i~~~~-vdi~~~~~~~~~l~~~~g~~-~vP~if 75 (109)
T 1wik_A 13 NKASVMLFMK-GNKQEAKCGFSKQI-LEIL-------NSTGVEYET-FDILEDEEVRQGLKTFSNWP-TYPQLY 75 (109)
T ss_dssp TTSSEEEEES-STTTCCCSSTHHHH-HHHH-------HHTCSCEEE-EESSSCHHHHHHHHHHHSCC-SSCEEE
T ss_pred ccCCEEEEEe-cCCCCCCCchHHHH-HHHH-------HHcCCCeEE-EECCCCHHHHHHHHHHhCCC-CCCEEE
Confidence 4455655443 4 899999974 3333 345777666 5555 454445555556643 254443
No 253
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=95.23 E-value=0.011 Score=44.18 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=25.8
Q ss_pred CCcEEEEEecC--CCCcCCCcCchhhHHHhHHHHHh-CCCcEEEEEe
Q 045485 35 NKKAILFAVPG--AFTPTCSQKHLPGFVEKSAELKS-KGVDIVACIS 78 (164)
Q Consensus 35 g~~vvl~f~~~--~~cp~C~~~~l~~l~~~~~~~~~-~~v~vi~~is 78 (164)
+++++|.|| + +||+ . .|.+.++..++.. .++.+.. |.
T Consensus 22 ~~~vlV~Fy-A~~pWCg----l-~P~~e~lA~~~~~~~~v~~ak-VD 61 (240)
T 2qc7_A 22 SKFVLVKFD-TQYPYGE----K-QDEFKRLAENSASSDDLLVAE-VG 61 (240)
T ss_dssp CSEEEEEEC-CSSCCSH----H-HHHHHHHHHHHTTCTTEEEEE-EC
T ss_pred CCCEEEEEe-CCCCCCc----c-hHHHHHHHHHhcCCCCeEEEE-Ee
Confidence 456776776 8 9998 5 7999999998864 2354444 44
No 254
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.18 E-value=0.0021 Score=46.73 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEec
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISV 79 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~ 79 (164)
.++++|+-|| +.|||.|..- -|.+ .++.+++. .++.+.- +-.
T Consensus 112 ~~~~~vveFf-~~~C~~C~~~-~p~~~~~~~l~~~~~-~~v~~~~-~~v 156 (197)
T 1un2_A 112 AGAPQVLEFF-SFFCPHCYQF-EEVLHISDNVKKKLP-EGVKMTK-YHV 156 (197)
T ss_dssp TTCCSEEEEE-CTTCHHHHHH-HHTSCHHHHHTTSSC-TTCCEEE-EEC
T ss_pred CCCCEEEEEE-CCCChhHHHh-CcccccHHHHHHHCC-CCCEEEE-ecc
Confidence 3567888888 8999999986 6777 77766664 3566666 444
No 255
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=95.14 E-value=0.023 Score=36.51 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=27.2
Q ss_pred CCCcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCC
Q 045485 34 SNKKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGI 94 (164)
Q Consensus 34 ~g~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~ 94 (164)
+...++| |+.+ +|||.|..- .+.|.+ .++.+.- +..+ +++...++.+..|.
T Consensus 15 ~~~~vvv-f~~g~~~~~~C~~C~~~-~~~L~~-------~~i~~~~-vdi~~~~~~~~~l~~~~g~ 70 (105)
T 2yan_A 15 NKASVML-FMKGNKQEAKCGFSKQI-LEILNS-------TGVEYET-FDILEDEEVRQGLKAYSNW 70 (105)
T ss_dssp TSSSEEE-EESBCSSSBCTTHHHHH-HHHHHH-------HTCCCEE-EEGGGCHHHHHHHHHHHTC
T ss_pred ccCCEEE-EEecCCCCCCCccHHHH-HHHHHH-------CCCCeEE-EECCCCHHHHHHHHHHHCC
Confidence 3445555 4421 899999974 444433 3565555 4444 34444444454554
No 256
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.13 E-value=0.018 Score=34.81 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=24.5
Q ss_pred EEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC-HHHHHHHHHHhCC
Q 045485 40 LFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND-AFVMKAWKENLGI 94 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~-~~~~~~~~~~~~~ 94 (164)
+.|+ ++|||.|... .+.+.+ .|+.+.. +..+. ++...++.+.++.
T Consensus 4 ~~y~-~~~C~~C~~~-~~~l~~-------~~i~~~~-~~i~~~~~~~~~~~~~~~~ 49 (82)
T 1fov_A 4 EIYT-KETCPYCHRA-KALLSS-------KGVSFQE-LPIDGNAAKREEMIKRSGR 49 (82)
T ss_dssp EEEE-CSSCHHHHHH-HHHHHH-------HTCCCEE-EECTTCSHHHHHHHHHHSS
T ss_pred EEEE-CCCChhHHHH-HHHHHH-------CCCCcEE-EECCCCHHHHHHHHHHhCC
Confidence 3444 7899999974 444432 3555444 44442 3334445555554
No 257
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.04 E-value=0.0098 Score=39.92 Aligned_cols=37 Identities=0% Similarity=-0.086 Sum_probs=26.9
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+.++++.|| ++ |.+|... .|.|.+++++++.+ +.++-
T Consensus 23 ~~pv~v~f~-a~-~~~c~~~-~p~l~~~A~~~~gk-~~f~~ 59 (133)
T 2djk_A 23 GIPLAYIFA-ET-AEERKEL-SDKLKPIAEAQRGV-INFGT 59 (133)
T ss_dssp TSCEEEEEC-SC-SSSHHHH-HHHHHHHHHSSTTT-SEEEE
T ss_pred CCCEEEEEe-cC-hhhHHHH-HHHHHHHHHHhCCe-EEEEE
Confidence 456776676 88 8899986 89999998888532 44444
No 258
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=95.01 E-value=0.027 Score=42.33 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=27.1
Q ss_pred CCcEEEEEec-CCCCcCCCcCchhhHHHhHHHHHh--CCCcEEEEEecCC
Q 045485 35 NKKAILFAVP-GAFTPTCSQKHLPGFVEKSAELKS--KGVDIVACISVND 81 (164)
Q Consensus 35 g~~vvl~f~~-~~~cp~C~~~~l~~l~~~~~~~~~--~~v~vi~~is~d~ 81 (164)
++.+||.||. ++||+ - .|.+.++..++.. ..+.+.- |..+.
T Consensus 33 ~~~vlV~Fy~~ApWCg----l-~P~~e~lA~~~~~~~~~v~~ak-VD~d~ 76 (248)
T 2c0g_A 33 FPYSVVKFDIASPYGE----K-HEAFTAFSKSAHKATKDLLIAT-VGVKD 76 (248)
T ss_dssp SSEEEEEEEESSCCSH----H-HHHHHHHHHHHHHHCSSEEEEE-EEECS
T ss_pred CCCEEEEEECCCCCCc----c-HHHHHHHHHHHhccCCCeEEEE-EECCc
Confidence 4556555553 89998 5 7999999998875 3455444 54443
No 259
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.89 E-value=0.03 Score=37.55 Aligned_cols=23 Identities=9% Similarity=0.112 Sum_probs=15.1
Q ss_pred CcEEEEEecCCCCcCCCcCchhhHHH
Q 045485 36 KKAILFAVPGAFTPTCSQKHLPGFVE 61 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~~~l~~l~~ 61 (164)
+.++| |+ ++|||+|... .+.|.+
T Consensus 27 ~~vvv-f~-~~~Cp~C~~~-~~~L~~ 49 (130)
T 2cq9_A 27 NCVVI-FS-KTSCSYCTMA-KKLFHD 49 (130)
T ss_dssp SSEEE-EE-CSSCSHHHHH-HHHHHH
T ss_pred CcEEE-EE-cCCChHHHHH-HHHHHH
Confidence 34444 55 8999999975 554443
No 260
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=94.77 E-value=0.019 Score=37.50 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=13.7
Q ss_pred EEEEEecCCCCcCCCcCchhhH
Q 045485 38 AILFAVPGAFTPTCSQKHLPGF 59 (164)
Q Consensus 38 vvl~f~~~~~cp~C~~~~l~~l 59 (164)
.|++|+ ++|||+|... .+.|
T Consensus 20 ~vv~f~-~~~Cp~C~~~-~~~L 39 (114)
T 2hze_A 20 KVTIFV-KYTCPFCRNA-LDIL 39 (114)
T ss_dssp CEEEEE-CTTCHHHHHH-HHHH
T ss_pred CEEEEE-eCCChhHHHH-HHHH
Confidence 455555 8999999974 4443
No 261
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.73 E-value=0.036 Score=34.35 Aligned_cols=46 Identities=15% Similarity=0.240 Sum_probs=26.6
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCC
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGI 94 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~ 94 (164)
++.|+ .+|||.|+.- .+.|. +.++.+.. +..+ +++...++.+.++.
T Consensus 8 v~ly~-~~~C~~C~~~-~~~L~-------~~~i~~~~-~di~~~~~~~~~l~~~~~~ 54 (92)
T 2khp_A 8 VIIYT-RPGCPYCARA-KALLA-------RKGAEFNE-IDASATPELRAEMQERSGR 54 (92)
T ss_dssp EEEEE-CTTCHHHHHH-HHHHH-------HTTCCCEE-EESTTSHHHHHHHHHHHTS
T ss_pred EEEEE-CCCChhHHHH-HHHHH-------HcCCCcEE-EECCCCHHHHHHHHHHhCC
Confidence 34444 7899999974 44333 34666555 5555 34444555555554
No 262
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=94.60 E-value=0.0095 Score=42.54 Aligned_cols=30 Identities=10% Similarity=-0.071 Sum_probs=25.6
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHH
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAEL 66 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 66 (164)
++++|+.|| ..|||.|..- -|.+.++.+++
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~-~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNM-ENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHH-GGGHHHHHHHH
T ss_pred CCCEEEEEE-CCCChhHHHh-hHHHHHHHHHh
Confidence 567788888 7999999997 69999998887
No 263
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.52 E-value=0.023 Score=36.41 Aligned_cols=44 Identities=18% Similarity=0.209 Sum_probs=23.7
Q ss_pred EEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCC-HHHHHHHHHHh
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVND-AFVMKAWKENL 92 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~-~~~~~~~~~~~ 92 (164)
|++|+ .+|||.|.+- .+.|.+ .|+.+.. +..+. ++...++.+..
T Consensus 18 v~vy~-~~~Cp~C~~a-k~~L~~-------~~i~y~~-idI~~~~~~~~~l~~~~ 62 (99)
T 3qmx_A 18 IEIYT-WSTCPFCMRA-LALLKR-------KGVEFQE-YCIDGDNEAREAMAARA 62 (99)
T ss_dssp EEEEE-CTTCHHHHHH-HHHHHH-------HTCCCEE-EECTTCHHHHHHHHHHT
T ss_pred EEEEE-cCCChhHHHH-HHHHHH-------CCCCCEE-EEcCCCHHHHHHHHHHh
Confidence 34444 7899999974 433332 3565555 44543 33333444443
No 264
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=94.37 E-value=0.037 Score=36.51 Aligned_cols=14 Identities=29% Similarity=0.676 Sum_probs=10.5
Q ss_pred EEEEecCCCCcCCCc
Q 045485 39 ILFAVPGAFTPTCSQ 53 (164)
Q Consensus 39 vl~f~~~~~cp~C~~ 53 (164)
|++|+ ++|||+|..
T Consensus 27 Vvvf~-~~~Cp~C~~ 40 (118)
T 3c1r_A 27 IFVAS-KTYCPYCHA 40 (118)
T ss_dssp EEEEE-CSSCHHHHH
T ss_pred EEEEE-cCCCcCHHH
Confidence 34455 899999996
No 265
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=94.31 E-value=0.036 Score=38.13 Aligned_cols=23 Identities=9% Similarity=0.112 Sum_probs=15.1
Q ss_pred CcEEEEEecCCCCcCCCcCchhhHHH
Q 045485 36 KKAILFAVPGAFTPTCSQKHLPGFVE 61 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~~~l~~l~~ 61 (164)
..++| |+ ++|||+|... .+.|.+
T Consensus 49 ~~Vvv-f~-~~~Cp~C~~~-k~~L~~ 71 (146)
T 2ht9_A 49 NCVVI-FS-KTSCSYCTMA-KKLFHD 71 (146)
T ss_dssp CSEEE-EE-CTTCHHHHHH-HHHHHH
T ss_pred CCEEE-EE-CCCChhHHHH-HHHHHH
Confidence 34444 55 8999999975 554443
No 266
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=94.21 E-value=0.024 Score=42.16 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=34.2
Q ss_pred CCcEEEEEecCCC--CcCCCcCchhhHHHhHHHHHh-CC---CcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 35 NKKAILFAVPGAF--TPTCSQKHLPGFVEKSAELKS-KG---VDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 35 g~~vvl~f~~~~~--cp~C~~~~l~~l~~~~~~~~~-~~---v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+++++|.|| +.| |+.|... .+.+.++.+.... +| +.++. +..+.. .+..+++|+.
T Consensus 25 ~~pv~v~~~-~~~~~c~~c~~~-~~~l~ela~~~~~~~~~~~v~~~~-vd~d~~---~~~~~~~gv~ 85 (243)
T 2hls_A 25 VNPVEVHVF-LSKSGCETCEDT-LRLMKLFEEESPTRNGGKLLKLNV-YYRESD---SDKFSEFKVE 85 (243)
T ss_dssp CSCEEEEEE-ECSSSCTTHHHH-HHHHHHHHHHSCEETTEESEEEEE-EETTTT---HHHHHHTTCC
T ss_pred CCCEEEEEE-eCCCCCCchHHH-HHHHHHHHHhccCCCCCceeEEEE-ecCCcC---HHHHHhcCCC
Confidence 368888988 788 9999975 6777777665311 22 44444 444432 3455667764
No 267
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.19 E-value=0.029 Score=34.81 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=12.4
Q ss_pred EEEecCCCCcCCCcCchhhHH
Q 045485 40 LFAVPGAFTPTCSQKHLPGFV 60 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~ 60 (164)
.+|+ .+|||.|.+- .+.|.
T Consensus 15 ~ly~-~~~Cp~C~~~-~~~L~ 33 (92)
T 3ic4_A 15 LMYG-LSTCPHCKRT-LEFLK 33 (92)
T ss_dssp EEEE-CTTCHHHHHH-HHHHH
T ss_pred EEEE-CCCChHHHHH-HHHHH
Confidence 3344 7899999974 44333
No 268
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=94.10 E-value=0.035 Score=36.03 Aligned_cols=20 Identities=10% Similarity=0.263 Sum_probs=13.1
Q ss_pred EEEEecCCCCcCCCcCchhhHH
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFV 60 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~ 60 (164)
|++|+ .+|||+|..- .+.|.
T Consensus 21 v~vy~-~~~Cp~C~~~-~~~L~ 40 (113)
T 3rhb_A 21 VVIYS-KTWCSYCTEV-KTLFK 40 (113)
T ss_dssp EEEEE-CTTCHHHHHH-HHHHH
T ss_pred EEEEE-CCCChhHHHH-HHHHH
Confidence 34454 7999999974 44443
No 269
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=93.70 E-value=0.0064 Score=43.51 Aligned_cols=39 Identities=15% Similarity=0.218 Sum_probs=27.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEE
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVA 75 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~ 75 (164)
.++++|+.|| ..|||.|..- -+.+ .++.+++. .++.++-
T Consensus 13 ~~~~~vvef~-d~~Cp~C~~~-~~~~~~~~~~~~~~~-~~v~~~~ 54 (189)
T 3l9v_A 13 VDAPAVVEFF-SFYCPPCYAF-SQTMGVDQAIRHVLP-QGSRMVK 54 (189)
T ss_dssp TTCCSEEEEE-CTTCHHHHHH-HHTSCHHHHHHTTCC-TTCCEEE
T ss_pred CCCCEEEEEE-CCCChhHHHH-hHhccchHHHHHhCC-CCCEEEE
Confidence 3567788888 8999999986 5765 34544443 3577766
No 270
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.59 E-value=0.18 Score=32.80 Aligned_cols=44 Identities=5% Similarity=-0.038 Sum_probs=25.7
Q ss_pred CCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHH
Q 045485 45 GAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKEN 91 (164)
Q Consensus 45 ~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~ 91 (164)
.++||.|.. ...-++..+-|.+.++.+.- +..+ +++...++.+.
T Consensus 15 ~~~C~~C~~--~~~~~~ak~~L~~~gi~y~~-vdI~~~~~~~~~l~~~ 59 (111)
T 2ct6_A 15 ASSSGFVAI--KKKQQDVVRFLEANKIEFEE-VDITMSEEQRQWMYKN 59 (111)
T ss_dssp CSSCSCHHH--HHHHHHHHHHHHHTTCCEEE-EETTTCHHHHHHHHHS
T ss_pred cCCCCCccc--chhHHHHHHHHHHcCCCEEE-EECCCCHHHHHHHHHH
Confidence 789999993 22233344455667888766 6555 34444444444
No 271
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=92.91 E-value=0.099 Score=34.07 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=25.9
Q ss_pred CcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC---CHHHHHHHH-HHhCC
Q 045485 36 KKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN---DAFVMKAWK-ENLGI 94 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d---~~~~~~~~~-~~~~~ 94 (164)
+.++| |. .+|||.|.+- .+.|. +.|+..-. +..| +..+.++.+ +..|.
T Consensus 17 ~~v~v-y~-~~~Cp~C~~a-k~~L~-------~~~i~~~~-~dvd~~~~~~~~~~~l~~~~g~ 68 (114)
T 3h8q_A 17 SRVVI-FS-KSYCPHSTRV-KELFS-------SLGVECNV-LELDQVDDGARVQEVLSEITNQ 68 (114)
T ss_dssp CSEEE-EE-CTTCHHHHHH-HHHHH-------HTTCCCEE-EETTTSTTHHHHHHHHHHHHSC
T ss_pred CCEEE-EE-cCCCCcHHHH-HHHHH-------HcCCCcEE-EEecCCCChHHHHHHHHHHhCC
Confidence 44544 44 7999999874 43333 34555444 4444 344554444 44554
No 272
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.64 E-value=0.38 Score=34.12 Aligned_cols=90 Identities=6% Similarity=-0.060 Sum_probs=50.6
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHH-
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFT- 109 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 109 (164)
.+|+++|++. ++||+.|..- ...+ .++.+-+. .+.-+.+ ...++.+....++...+-. + ...++
T Consensus 54 e~K~LlVyLh-s~~~~~~~~f-~~~~L~~~~V~~~l~-~nfV~w~-~dv~~~e~~~~~~~~~~~~--~------g~~~a~ 121 (178)
T 2ec4_A 54 DRKLLAIYLH-HDESVLTNVF-CSQMLCAESIVSYLS-QNFITWA-WDLTKDSNRARFLTMCNRH--F------GSVVAQ 121 (178)
T ss_dssp TCCEEEEEEE-CSSCSHHHHH-HHHTTTCHHHHHHHH-HTEEEEE-EECCSHHHHHHHHHHHHHH--T------CHHHHH
T ss_pred hCcEEEEEEe-CCCCccHHHH-HHHhcCCHHHHHHHH-cCEEEEE-EeCCCchhhhhhhhhhhhh--h------HHHHHH
Confidence 4566666666 9999998643 3222 22223333 4665666 6777777655555444211 1 12233
Q ss_pred --HHhCCccccCCCCCCCCcceeEEEEEecCC---cEEEEEee
Q 045485 110 --KAIGCELDLSDKPMGLGVRSRRYALLAENG---VVKVLNLE 147 (164)
Q Consensus 110 --~~~gv~~~~~~~~~~~~~~~p~~~lid~~G---~I~~~~~~ 147 (164)
+.|++. ++ |...+|++.| +|+....|
T Consensus 122 ~~~~~~~~----------~~--P~l~ii~~~~~~~~vl~~~~G 152 (178)
T 2ec4_A 122 TIRTQKTD----------QF--PLFLIIMGKRSSNEVLNVIQG 152 (178)
T ss_dssp HHHHSCST----------TC--SEEEEECCCSSCCCEEEEECS
T ss_pred HHhhcCCC----------CC--CeEEEEEcCCCceEEEEEEeC
Confidence 347775 34 5599998763 66666664
No 273
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=91.59 E-value=0.19 Score=33.63 Aligned_cols=14 Identities=21% Similarity=0.688 Sum_probs=10.3
Q ss_pred EEEEecCCCCcCCCc
Q 045485 39 ILFAVPGAFTPTCSQ 53 (164)
Q Consensus 39 vl~f~~~~~cp~C~~ 53 (164)
|++|+ .+|||+|.+
T Consensus 39 Vvvy~-~~~Cp~C~~ 52 (129)
T 3ctg_A 39 VFVAA-KTYCPYCKA 52 (129)
T ss_dssp EEEEE-CTTCHHHHH
T ss_pred EEEEE-CCCCCchHH
Confidence 34444 799999995
No 274
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=91.45 E-value=0.12 Score=34.23 Aligned_cols=65 Identities=6% Similarity=-0.059 Sum_probs=45.5
Q ss_pred EEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 40 LFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV----NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
+.+|..++||.|+.. . +-+.+.|+.+-. +.. .+.+++++|+...+.+ +.-+....+..++.++..
T Consensus 2 i~iY~~~~C~~c~ka-~-------~~L~~~gi~~~~-~di~~~~~~~~el~~~l~~~~~~--~~~l~n~~~~~~k~l~~~ 70 (120)
T 3l78_A 2 VTLFLSPSCTSCRKA-R-------AWLNRHDVVFQE-HNIMTSPLSRDELLKILSYTENG--TEDIISTRSKVFQKLDID 70 (120)
T ss_dssp EEEEECSSCHHHHHH-H-------HHHHHTTCCEEE-EETTTSCCCHHHHHHHHHHCSST--HHHHBCTTCHHHHHTTCC
T ss_pred EEEEeCCCCHHHHHH-H-------HHHHHcCCCeEE-EecccCCCcHHHHHHHHhhcCCC--HHHhhcCCcHHHHHcCCC
Confidence 344557889999974 3 234457777655 433 3678999999988877 655666778888888864
No 275
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=91.36 E-value=0.24 Score=30.00 Aligned_cols=13 Identities=15% Similarity=0.112 Sum_probs=9.8
Q ss_pred EecCCCCcCCCcC
Q 045485 42 AVPGAFTPTCSQK 54 (164)
Q Consensus 42 f~~~~~cp~C~~~ 54 (164)
+|..+|||.|..-
T Consensus 8 ly~~~~Cp~C~~~ 20 (89)
T 3msz_A 8 IYTRNGCPYCVWA 20 (89)
T ss_dssp EEECTTCHHHHHH
T ss_pred EEEcCCChhHHHH
Confidence 3347899999974
No 276
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=91.35 E-value=0.039 Score=35.25 Aligned_cols=20 Identities=5% Similarity=-0.017 Sum_probs=13.3
Q ss_pred EEEEecCCCCcCCCcCchhhHH
Q 045485 39 ILFAVPGAFTPTCSQKHLPGFV 60 (164)
Q Consensus 39 vl~f~~~~~cp~C~~~~l~~l~ 60 (164)
|++|+ ++|||.|..- .+.|.
T Consensus 24 v~ly~-~~~Cp~C~~a-k~~L~ 43 (103)
T 3nzn_A 24 VIMYG-LSTCVWCKKT-KKLLT 43 (103)
T ss_dssp EEEEE-CSSCHHHHHH-HHHHH
T ss_pred EEEEc-CCCCchHHHH-HHHHH
Confidence 44454 8999999975 44333
No 277
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=90.51 E-value=0.82 Score=28.26 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=24.6
Q ss_pred CCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhC
Q 045485 45 GAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLG 93 (164)
Q Consensus 45 ~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~ 93 (164)
.++||.|.. ...=.+..+-+.+.|+...- +..+ +++...++.+..|
T Consensus 9 ~~~C~~c~~--~~~~~~ak~~L~~~~i~~~~-~di~~~~~~~~~l~~~~g 55 (93)
T 1t1v_A 9 TSVTGSREI--KSQQSEVTRILDGKRIQYQL-VDISQDNALRDEMRTLAG 55 (93)
T ss_dssp CSSCSCHHH--HHHHHHHHHHHHHTTCCCEE-EETTSCHHHHHHHHHHTT
T ss_pred cCCCCCchh--hHHHHHHHHHHHHCCCceEE-EECCCCHHHHHHHHHHhC
Confidence 789999931 11111223345567877665 5554 4444444555555
No 278
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=90.26 E-value=0.2 Score=34.01 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=30.5
Q ss_pred CcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCCCCceEEE
Q 045485 36 KKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGINDEVLLL 101 (164)
Q Consensus 36 ~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~~~~~~~l 101 (164)
..++||.. + .|||.|.+- ... |.+.|+.+.. +..+ +++...++.+..|.+ .+|.+
T Consensus 35 ~~Vvvy~k-s~~~~~~Cp~C~~a-k~~-------L~~~gv~y~~-vdI~~d~~~~~~L~~~~G~~-tvP~V 94 (135)
T 2wci_A 35 NPILLYMK-GSPKLPSCGFSAQA-VQA-------LAACGERFAY-VDILQNPDIRAELPKYANWP-TFPQL 94 (135)
T ss_dssp CSEEEEES-BCSSSBSSHHHHHH-HHH-------HHTTCSCCEE-EEGGGCHHHHHHHHHHHTCC-SSCEE
T ss_pred CCEEEEEE-ecCCCCCCccHHHH-HHH-------HHHcCCceEE-EECCCCHHHHHHHHHHHCCC-CcCEE
Confidence 44665554 4 699999974 333 3345776555 5443 455555555555654 24433
No 279
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.25 E-value=0.35 Score=31.39 Aligned_cols=54 Identities=17% Similarity=0.146 Sum_probs=29.0
Q ss_pred hhhcCCCcEEEEEecC-----CCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCC
Q 045485 30 SDLTSNKKAILFAVPG-----AFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGI 94 (164)
Q Consensus 30 ~d~~~g~~vvl~f~~~-----~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~ 94 (164)
.+..+..+++|+. . +|||.|.+- ..- |.+.|+.... +..+ +++....+.+..|.
T Consensus 10 ~~~i~~~~Vvlf~--kg~~~~~~Cp~C~~a-k~~-------L~~~gi~y~~-~di~~d~~~~~~l~~~~g~ 69 (111)
T 3zyw_A 10 KKLTHAAPCMLFM--KGTPQEPRCGFSKQM-VEI-------LHKHNIQFSS-FDIFSDEEVRQGLKAYSSW 69 (111)
T ss_dssp HHHHTSSSEEEEE--SBCSSSBSSHHHHHH-HHH-------HHHTTCCCEE-EEGGGCHHHHHHHHHHHTC
T ss_pred HHHHhcCCEEEEE--ecCCCCCcchhHHHH-HHH-------HHHcCCCeEE-EECcCCHHHHHHHHHHHCC
Confidence 3343555666554 4 799999974 322 3345666555 4443 44444444444454
No 280
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=89.29 E-value=0.25 Score=32.71 Aligned_cols=65 Identities=25% Similarity=0.313 Sum_probs=44.7
Q ss_pred EEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEe----cCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 40 LFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACIS----VNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is----~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
|.+|...+|+.|++. .. -+++.|+.+-. +. +-+.+++.+|++..|.+ +.-+....+...+.+++.
T Consensus 5 i~iY~~~~C~~c~ka-~~-------~L~~~gi~~~~-~di~~~~~~~~eL~~~l~~~g~~--~~~l~n~~~~~~k~l~l~ 73 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRA-KA-------ELDDLAWDYDA-IDIKKNPPAASLIRNWLENSGLE--LKKFFNTSGQSYRALGLK 73 (120)
T ss_dssp EEEEECSSCHHHHHH-HH-------HHHHHTCCEEE-EETTTSCCCHHHHHHHHHHSCCC--GGGGBCTTSHHHHHTTHH
T ss_pred EEEEeCCCChHHHHH-HH-------HHHHcCCceEE-EEeccCchhHHHHHHHHHHcCCC--HHHHhCCCCcchhhcCcc
Confidence 445557889999974 32 23446776544 32 23688999999999987 555567778888888763
No 281
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=89.26 E-value=0.58 Score=28.50 Aligned_cols=42 Identities=17% Similarity=0.065 Sum_probs=25.1
Q ss_pred cCC----CCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC------CHHHHHHHHHHhCC
Q 045485 44 PGA----FTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN------DAFVMKAWKENLGI 94 (164)
Q Consensus 44 ~~~----~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d------~~~~~~~~~~~~~~ 94 (164)
..+ |||.|.+- .. -|.+.|+..-. +..+ +++...++.+..|.
T Consensus 6 ~~~~~~~~Cp~C~~a-k~-------~L~~~gi~y~~-idI~~~~~~~~~~~~~~l~~~~g~ 57 (87)
T 1aba_A 6 GYDSNIHKCGPCDNA-KR-------LLTVKKQPFEF-INIMPEKGVFDDEKIAELLTKLGR 57 (87)
T ss_dssp ECCTTTSCCHHHHHH-HH-------HHHHTTCCEEE-EESCSBTTBCCHHHHHHHHHHHTC
T ss_pred EeCCCCCcCccHHHH-HH-------HHHHcCCCEEE-EEeeccccccCHHHHHHHHHHhCC
Confidence 378 99999874 22 23446777555 5554 45555556655554
No 282
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=89.17 E-value=0.96 Score=29.96 Aligned_cols=54 Identities=13% Similarity=0.192 Sum_probs=39.6
Q ss_pred cCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 33 TSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 33 ~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.++.++||.+= ... + -..+..+.+.+++.|+.+|| |...+++.+++.....|++
T Consensus 45 F~~aPVVlDl~--~l~-----~-~~dl~~L~~~l~~~gl~~vG-V~g~~~~~~~~~a~~~GLp 98 (120)
T 3ghf_A 45 LKHAPVVINVS--GLE-----S-PVNWPELHKIVTSTGLRIIG-VSGCKDASLKVEIDRMGLP 98 (120)
T ss_dssp HTTCEEEEEEE--ECC-----S-SCCHHHHHHHHHTTTCEEEE-EESCCCHHHHHHHHHHTCC
T ss_pred hCCCcEEEEcc--ccC-----C-hHHHHHHHHHHHHcCCEEEE-EeCCCcHHHHHHHHHCCCC
Confidence 46888888874 221 1 23567777888889999999 7776666778888888876
No 283
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=88.86 E-value=0.081 Score=37.83 Aligned_cols=39 Identities=15% Similarity=0.235 Sum_probs=27.8
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhH---HHhHHHHHhCCCcEEE
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGF---VEKSAELKSKGVDIVA 75 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l---~~~~~~~~~~~v~vi~ 75 (164)
.++++|+.|| ..+||.|..- -+.+ .++.+++.+ ++.++-
T Consensus 20 ~~~~~vvef~-d~~Cp~C~~~-~~~l~~~~~l~~~~~~-~v~~~~ 61 (191)
T 3l9s_A 20 AGEPQVLEFF-SFYCPHCYQF-EEVLHVSDNVKKKLPE-GTKMTK 61 (191)
T ss_dssp CSSSCEEEEE-CTTCHHHHHH-HHTSCHHHHHHHHSCT-TCCEEE
T ss_pred CCCCeEEEEE-CCCChhHHHh-ChhccchHHHHHhCCC-CcEEEE
Confidence 4577777777 7899999986 5765 466666643 566665
No 284
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=88.84 E-value=0.31 Score=32.66 Aligned_cols=64 Identities=6% Similarity=-0.003 Sum_probs=42.3
Q ss_pred EEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec--C--CHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 41 FAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV--N--DAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 41 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~--d--~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
.+|..++||.|... ... +.+.|+..-. +.. + +.++++++++..+.+ +.-+....+..++.++..
T Consensus 4 ~lY~~~~C~~C~ka-~~~-------L~~~gi~y~~-~di~~~~~~~~el~~~l~~~~~~--~~~l~n~~~~~~k~l~~~ 71 (132)
T 1z3e_A 4 TLYTSPSCTSCRKA-RAW-------LEEHEIPFVE-RNIFSEPLSIDEIKQILRMTEDG--TDEIISTRSKVFQKLNVN 71 (132)
T ss_dssp EEEECTTCHHHHHH-HHH-------HHHTTCCEEE-EETTTSCCCHHHHHHHHHTCSSC--GGGTBCTTSHHHHHHCCC
T ss_pred EEEeCCCChHHHHH-HHH-------HHHcCCceEE-EEccCCCccHHHHHHHHHHcCCC--HHHhhcCCchHHHhcCcc
Confidence 34447899999974 332 3346777554 433 2 457888898877776 555556777888888753
No 285
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=88.75 E-value=0.22 Score=32.98 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=44.1
Q ss_pred EEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-Ee--cCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 41 FAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-IS--VNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 41 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is--~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
.+|...+|+.|++. .. -+.+.|+.+-.+ +. +-+.+++.+|++..|.+ +.-+....+..++.+++.
T Consensus 7 ~iY~~p~C~~c~ka-~~-------~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~--~~~l~n~~~~~~k~l~l~ 74 (120)
T 3gkx_A 7 LFLQYPACSTCQKA-KK-------WLIENNIEYTNRLIVDDNPTVEELKAWIPLSGLP--VKKFFNTSGVVYKELKLS 74 (120)
T ss_dssp EEEECTTCHHHHHH-HH-------HHHHTTCCCEEEETTTTCCCHHHHHHHHHHHTSC--GGGGBCTTSHHHHHTTHH
T ss_pred EEEECCCChHHHHH-HH-------HHHHcCCceEEEecccCcCCHHHHHHHHHHcCCC--HHHeEeCCCchhhhcCcc
Confidence 34447789999974 32 234567665441 22 23688999999999987 555566778888888754
No 286
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=88.24 E-value=0.25 Score=24.16 Aligned_cols=21 Identities=14% Similarity=0.339 Sum_probs=18.1
Q ss_pred CCcCCCcCchhhHHHhHHHHHh
Q 045485 47 FTPTCSQKHLPGFVEKSAELKS 68 (164)
Q Consensus 47 ~cp~C~~~~l~~l~~~~~~~~~ 68 (164)
-||.|... +|.++.+...|.+
T Consensus 5 ~CpvCk~q-~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQ-APDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCE-ESSHHHHHHHHHH
T ss_pred cCcccccc-CcChHHHHHHHHH
Confidence 39999998 9999999887764
No 287
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=87.78 E-value=1.4 Score=37.27 Aligned_cols=124 Identities=11% Similarity=0.070 Sum_probs=67.5
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcC--CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh-------------
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTS--NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS------------- 68 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~--g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~------------- 68 (164)
+.+|..+|++.+. ...+|.. ++|.++.. |+++||.|- +...+.+. ...+.++.+.+..
T Consensus 467 ~~~G~r~p~~~~~-~~~~g~~--~~l~~~~~~~g~~~ll~~~-~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~ 539 (639)
T 2dkh_A 467 FTVGMRFHSAPVV-RVCDAKP--VQLGHCGKADGRWRLYAFA-AQNDLAQP---ESGLLALCRFLEGDAASPLRRFTPAG 539 (639)
T ss_dssp SCTTSBCCCCEEE-ETTTCCE--EEGGGGCCSSSCEEEEEEC-CTTTTTCT---TSHHHHHHHHHHHCTTCHHHHHSCTT
T ss_pred CCCcCCCCCCeEE-ecCCCCE--EEHHHhhccCCCEEEEEec-CCCCchhh---HHHHHHHHHHHhhCCccHHHhcCCCC
Confidence 5689999998852 2236766 89988763 577777763 43333333 0233344333321
Q ss_pred ---C-CCcEEEEEecCC---------HHHHHHHHHHhCCCCceEEEEeC---c-chHHHHhCCccccCCCCCCCCcceeE
Q 045485 69 ---K-GVDIVACISVND---------AFVMKAWKENLGINDEVLLLSDG---N-GVFTKAIGCELDLSDKPMGLGVRSRR 131 (164)
Q Consensus 69 ---~-~v~vi~~is~d~---------~~~~~~~~~~~~~~~~~~~l~D~---~-~~~~~~~gv~~~~~~~~~~~~~~~p~ 131 (164)
. -+.++. |.... |+.++.+..++++.++..++.|. + +.+.+.||+... ..+
T Consensus 540 ~~~~~~~~~~~-i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~-----------~g~ 607 (639)
T 2dkh_A 540 QDIDSIFDLRA-VFPQAYTEVALETLPALLLPPKGQLGMIDYEKVFSPDLKNAGQDIFELRGIDRQ-----------QGA 607 (639)
T ss_dssp SCTTSSEEEEE-ECSSCGGGCCGGGSCGGGSCEETTTTEECCCSEEECCCSSTTCCHHHHTTBCTT-----------TCE
T ss_pred CCcCceEEEEE-EecCCCCccchhhCcHhhCCcccccccccceeEEeCCCcccccchHHHhCCCCC-----------ceE
Confidence 1 145555 43322 11111122223331123566773 2 668999998531 145
Q ss_pred EEEEecCCcEEEEEe
Q 045485 132 YALLAENGVVKVLNL 146 (164)
Q Consensus 132 ~~lid~~G~I~~~~~ 146 (164)
.+||-|||-|-++..
T Consensus 608 ~v~vRPD~yv~~~~~ 622 (639)
T 2dkh_A 608 LVVVRPDQYVAQVLP 622 (639)
T ss_dssp EEEECTTSBEEEEEC
T ss_pred EEEECCCCceEEeec
Confidence 789999999976654
No 288
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=86.67 E-value=0.84 Score=29.30 Aligned_cols=53 Identities=19% Similarity=0.264 Sum_probs=27.2
Q ss_pred hcCCCcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHhCC
Q 045485 32 LTSNKKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENLGI 94 (164)
Q Consensus 32 ~~~g~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~~~ 94 (164)
..+...++|+-- + .|||.|.+- ... |.+.|+..-. +..+ +++...++.+..|.
T Consensus 14 ~i~~~~Vvvy~k-~t~~~p~Cp~C~~a-k~~-------L~~~gi~~~~-~dI~~~~~~~~~l~~~~g~ 71 (109)
T 3ipz_A 14 LVNSEKVVLFMK-GTRDFPMCGFSNTV-VQI-------LKNLNVPFED-VNILENEMLRQGLKEYSNW 71 (109)
T ss_dssp HHTSSSEEEEES-BCSSSBSSHHHHHH-HHH-------HHHTTCCCEE-EEGGGCHHHHHHHHHHHTC
T ss_pred HHccCCEEEEEe-cCCCCCCChhHHHH-HHH-------HHHcCCCcEE-EECCCCHHHHHHHHHHHCC
Confidence 334555655443 4 389999874 322 3335666555 4443 44444444444443
No 289
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=86.34 E-value=0.46 Score=39.38 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=31.4
Q ss_pred eEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 98 VLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 98 ~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+.+..|.+..+.+.|||. .+ |+.++++++|++....+.
T Consensus 187 v~~v~~~~~~l~~kfgV~----------~~--Pslvl~~~nGk~~~~~v~ 224 (519)
T 3t58_A 187 VRRVLNTESDLVNKFGVT----------DF--PSCYLLLRNGSVSRVPVL 224 (519)
T ss_dssp EEEEETTCHHHHHHHTCC----------CS--SEEEEEETTSCEEECCCS
T ss_pred EEEecCchHHHHHHcCCC----------CC--CeEEEEeCCCceeecccc
Confidence 777788889999999997 33 669999999999777654
No 290
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=86.17 E-value=0.32 Score=33.19 Aligned_cols=65 Identities=15% Similarity=0.092 Sum_probs=44.3
Q ss_pred EEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCcc
Q 045485 41 FAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV----NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCEL 116 (164)
Q Consensus 41 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 116 (164)
.+|..++|+.|++. .. -+.+.|+..-. +.. -+.+++.++..+.|++ ..-+....+..++.+++..
T Consensus 5 tiY~~p~C~~crka-k~-------~L~~~gi~~~~-idi~~~~~~~~eL~~~~~~~g~p--~~~l~n~~~~~yk~l~l~~ 73 (141)
T 1s3c_A 5 TIYHNPASGTSRNT-LE-------MIRNSGTEPTI-ILYLENPPSRDELVKLIADMGIS--VRALLRKNVEPYEQLGLAE 73 (141)
T ss_dssp EEECCTTCHHHHHH-HH-------HHHHTTCCCEE-ECTTTSCCCHHHHHHHHHHHTSC--HHHHBCSSSHHHHHTTTTS
T ss_pred EEEECCCChHHHHH-HH-------HHHHcCCCEEE-EECCCCCccHHHHHHHhcccCCC--HHHhccCCchhHHhcCCcc
Confidence 34557889999974 32 34456776555 433 2678899999999987 5444566788888887653
No 291
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=86.13 E-value=0.37 Score=31.93 Aligned_cols=64 Identities=13% Similarity=0.126 Sum_probs=43.9
Q ss_pred EEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----CCHHHHHHHHHHhCC-CCceEEEEeCcchHHHHhCCc
Q 045485 41 FAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV----NDAFVMKAWKENLGI-NDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 41 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~----d~~~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~gv~ 115 (164)
.+|...+|+.|++. . +-+++.|+.+-. +.. -+.+++++|++..|+ + ..=+....+..++.+++.
T Consensus 8 ~iY~~p~C~~c~ka-~-------~~L~~~gi~~~~-~di~~~~~~~~eL~~~l~~~g~~~--~~~l~n~~~~~~k~l~l~ 76 (121)
T 3rdw_A 8 TIYHNPRCSKSRET-L-------ALVEQQGITPQV-VLYLETPPSVDKLKELLQQLGFSD--ARQLMRTKEDLYKTLNLD 76 (121)
T ss_dssp EEECCTTCHHHHHH-H-------HHHHTTTCCCEE-ECTTTSCCCHHHHHHHHHHTTCSS--GGGGBCTTSHHHHHTTTT
T ss_pred EEEECCCCHHHHHH-H-------HHHHHcCCCcEE-EeeccCCCcHHHHHHHHHhcCCcC--HHHHhcCCChhhhhcCcc
Confidence 34447789999974 3 234456766544 422 368899999999998 6 433456678888888875
No 292
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=86.10 E-value=1.1 Score=29.40 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=26.2
Q ss_pred CCCcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCc---EEEEEecC-CHHHHHHHHHHhCCC
Q 045485 34 SNKKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVD---IVACISVN-DAFVMKAWKENLGIN 95 (164)
Q Consensus 34 ~g~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~---vi~~is~d-~~~~~~~~~~~~~~~ 95 (164)
+..+++|+-- + +|||.|.+- . ++.++ .|+. +.. +..+ +++....+.+..|.+
T Consensus 14 ~~~~Vvvfsk-~t~~~p~Cp~C~~a-k----~lL~~---~gv~~~~~~~-~dv~~~~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 14 ESAPVVLFMK-GTPEFPKCGFSRAT-I----GLLGN---QGVDPAKFAA-YNVLEDPELREGIKEFSEWP 73 (121)
T ss_dssp HSCSEEEEES-BCSSSBCTTHHHHH-H----HHHHH---HTBCGGGEEE-EECTTCHHHHHHHHHHHTCC
T ss_pred ccCCEEEEEe-ccCCCCCCccHHHH-H----HHHHH---cCCCcceEEE-EEecCCHHHHHHHHHHhCCC
Confidence 3455665553 4 389999874 3 22222 3555 444 4443 444444444444543
No 293
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=85.30 E-value=3.4 Score=27.35 Aligned_cols=45 Identities=9% Similarity=0.009 Sum_probs=28.3
Q ss_pred CCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecC-CHHHHHHHHHHh
Q 045485 45 GAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVN-DAFVMKAWKENL 92 (164)
Q Consensus 45 ~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d-~~~~~~~~~~~~ 92 (164)
.+.||.|.. -..=.+...-|.++||.+-- +..+ +++.-.++.++.
T Consensus 7 t~~c~~c~~--kk~c~~aK~lL~~kgV~feE-idI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 7 ASSSGSTAI--KKKQQDVLGFLEANKIGFEE-KDIAANEENRKWMRENV 52 (121)
T ss_dssp CTTCSCHHH--HHHHHHHHHHHHHTTCCEEE-EECTTCHHHHHHHHHHS
T ss_pred cCCCCCccc--hHHHHHHHHHHHHCCCceEE-EECCCCHHHHHHHHHhc
Confidence 788999953 12223344456778998777 6665 555555566665
No 294
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=84.63 E-value=0.79 Score=30.13 Aligned_cols=54 Identities=20% Similarity=0.241 Sum_probs=26.3
Q ss_pred hhcCCCcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCc-EEEEEecC-CHHHHHHHHHHhCC
Q 045485 31 DLTSNKKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVD-IVACISVN-DAFVMKAWKENLGI 94 (164)
Q Consensus 31 d~~~g~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~-vi~~is~d-~~~~~~~~~~~~~~ 94 (164)
+..+..+++||- .+ .|||.|.+- . ++ |.+.|+. .-. +..+ +++....+.+..|.
T Consensus 15 ~~i~~~~Vvvfs-k~t~~~p~Cp~C~~a-k----~l---L~~~gv~~~~~-vdV~~d~~~~~~l~~~tg~ 74 (118)
T 2wem_A 15 ALVKKDKVVVFL-KGTPEQPQCGFSNAV-V----QI---LRLHGVRDYAA-YNVLDDPELRQGIKDYSNW 74 (118)
T ss_dssp HHHHHSSEEEEE-SBCSSSBSSHHHHHH-H----HH---HHHTTCCCCEE-EESSSCHHHHHHHHHHHTC
T ss_pred HHhccCCEEEEE-ecCCCCCccHHHHHH-H----HH---HHHcCCCCCEE-EEcCCCHHHHHHHHHHhCC
Confidence 333345565544 34 389999874 2 22 3345663 444 4444 44433444343343
No 295
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=83.03 E-value=0.58 Score=32.67 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=27.4
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhH-HHhHHHHHhCCCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGF-VEKSAELKSKGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l-~~~~~~~~~~~v~vi~ 75 (164)
++.+++.|| ...||.|... .+.+ .++.+++. ..+.+..
T Consensus 17 ~~~~~ief~-d~~CP~C~~~-~~~l~~~l~~~~~-~~v~~~~ 55 (195)
T 3c7m_A 17 ADKTLIKVF-SYACPFCYKY-DKAVTGPVSEKVK-DIVAFTP 55 (195)
T ss_dssp CTTEEEEEE-CTTCHHHHHH-HHHTHHHHHHHTT-TTCEEEE
T ss_pred CCcEEEEEE-eCcCcchhhC-cHHHHHHHHHhCC-CceEEEE
Confidence 456777777 6999999986 6888 77776664 3466555
No 296
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=82.58 E-value=3.6 Score=34.92 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=66.5
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcC--CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh-------------
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTS--NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS------------- 68 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~--g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~------------- 68 (164)
+.+|..+|++.+. ...+|.. ++|.+... |++.||.|- +.-. .... ...+.++.+.+..
T Consensus 479 ~~~G~r~p~~~~~-~~~~g~~--~~l~~~l~~~g~~~ll~~~-~~~~--~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~ 551 (665)
T 1pn0_A 479 CVVGTRFKSQPVV-RHSEGLW--MHFGDRLVTDGRFRIIVFA-GKAT--DATQ-MSRIKKFAAYLDSENSVISRYTPKGA 551 (665)
T ss_dssp SCTTSBCCCCEEE-ETTTTEE--EEGGGGCCCSSCEEEEEEE-ECTT--SHHH-HHHHHHHHHHHHSTTSHHHHHSBTTS
T ss_pred CCCcCCCCCCeEE-ecCCCcE--EEHhHhhccCCCEEEEEec-CCcc--cchh-HHHHHHHHHHhhccccHHhhcCCccc
Confidence 5789999999852 2236766 89988664 577777764 3211 0112 3444444444421
Q ss_pred ---CCCcEEEEEecCCHHH--HHHHHH---HhCCCCceEEEEe------CcchHHHHhCCccccCCCCCCCCcceeEEEE
Q 045485 69 ---KGVDIVACISVNDAFV--MKAWKE---NLGINDEVLLLSD------GNGVFTKAIGCELDLSDKPMGLGVRSRRYAL 134 (164)
Q Consensus 69 ---~~v~vi~~is~d~~~~--~~~~~~---~~~~~~~~~~l~D------~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~l 134 (164)
.-+.++. |....... +..+-. +-+.. +..++.| +++.+++.||+... ..+.+|
T Consensus 552 ~~~~~~~~~~-i~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~g~~~~-----------~g~~vl 618 (665)
T 1pn0_A 552 DRNSRIDVIT-IHSCHRDDIEMHDFPAPALHPKWQ-YDFIYADCDSWHHPHPKSYQAWGVDET-----------KGAVVV 618 (665)
T ss_dssp CTTSSEEEEE-EESSCTTSCCGGGSCTTTTSCTTC-CSSEEECSCCSSSCCCCHHHHHTBCTT-----------TCEEEE
T ss_pred CccceeEEEE-EecCCCCccchhhCCHHHcCcccc-hheEeecCcccccccccHHHHcCCCCC-----------CceEEE
Confidence 1255555 42222110 001100 00112 1245667 35779999998531 134799
Q ss_pred EecCCcEEEEEe
Q 045485 135 LAENGVVKVLNL 146 (164)
Q Consensus 135 id~~G~I~~~~~ 146 (164)
|-|||-|-++..
T Consensus 619 vRPD~yV~~~~~ 630 (665)
T 1pn0_A 619 VRPDGYTSLVTD 630 (665)
T ss_dssp ECTTSBEEEEEC
T ss_pred ECCCCcEEEEec
Confidence 999999976654
No 297
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=82.17 E-value=0.31 Score=33.68 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=25.1
Q ss_pred CCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHh
Q 045485 34 SNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKS 68 (164)
Q Consensus 34 ~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 68 (164)
.++++|+-|+ .-.||.|..- -+.+.++.+++.+
T Consensus 20 ~~~~~vvEf~-dy~Cp~C~~~-~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 20 SSSPVVSEFF-SFYCPHCNTF-EPIIAQLKQQLPE 52 (184)
T ss_dssp CSSCEEEEEE-CTTCHHHHHH-HHHHHHHHHTSCT
T ss_pred CCCCEEEEEE-CCCCHhHHHH-hHHHHHHHhhcCC
Confidence 4677788777 6789999986 5778777776653
No 298
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=81.35 E-value=1.1 Score=28.99 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=36.8
Q ss_pred EecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 42 AVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV----NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 42 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+|..++||.|... .. -+.++|+.+-. +.. -+.+++++|+++.|+. -+....+..++.++.
T Consensus 4 iY~~~~C~~C~ka-k~-------~L~~~gi~~~~-~di~~~~~~~~~l~~~~~~~g~~----~l~n~~~~~~k~l~~ 67 (114)
T 1rw1_A 4 LYGIKACDTMKKA-RT-------WLDEHKVAYDF-HDYKAVGIDREHLRRWCAEHGWQ----TVLNRAGTTFRKLDE 67 (114)
T ss_dssp EEECSSCHHHHHH-HH-------HHHHTTCCEEE-EEHHHHCCCHHHHHHHHHHHCHH----HHBCTTSHHHHTSCH
T ss_pred EEECCCChHHHHH-HH-------HHHHCCCceEE-EeecCCCCCHHHHHHHHHhCChH----HhccCCcHhHHhcCc
Confidence 3447899999974 32 34456777655 433 2458889999888742 122345566666654
No 299
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=80.33 E-value=0.52 Score=35.86 Aligned_cols=36 Identities=17% Similarity=0.396 Sum_probs=25.3
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
|+.+|++|+ -..||+|++. .+.+.+..+ +-.|.++.
T Consensus 147 gk~~I~vFt-Dp~CPYCkkl-~~~l~~~l~---~~~Vr~i~ 182 (273)
T 3tdg_A 147 KDKILYIVS-DPMCPHCQKE-LTKLRDHLK---ENTVRMVV 182 (273)
T ss_dssp TTCEEEEEE-CTTCHHHHHH-HHTHHHHHH---HCEEEEEE
T ss_pred CCeEEEEEE-CcCChhHHHH-HHHHHHHhh---CCcEEEEE
Confidence 566777776 8899999997 688876554 34455554
No 300
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=80.05 E-value=4.9 Score=30.43 Aligned_cols=34 Identities=6% Similarity=0.002 Sum_probs=21.2
Q ss_pred EEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 38 AILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 38 vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+.|..|.+.+||.|..- -..|.++.. +.++..+.
T Consensus 44 ~~VelyTs~gCp~C~~A-k~lL~~~~~---~~~vi~l~ 77 (270)
T 2axo_A 44 GVVELFTSQGCASCPPA-DEALRKMIQ---KGDVVGLS 77 (270)
T ss_dssp CEEEEEECTTCTTCHHH-HHHHHHHHH---HTSSEEEE
T ss_pred cEEEEEeCCCCCChHHH-HHHHHHhhc---cCCeeeEE
Confidence 55555668999999984 555555543 34553334
No 301
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=79.45 E-value=13 Score=30.18 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=57.5
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHH
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAF 83 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~ 83 (164)
..+|..+|+.-+. .+|+. +++-|+.+...+|| .+... ... .....+.. .+.|+.+-. +.....
T Consensus 420 ~~pG~r~p~~~l~---~~~~~--~~~~dl~g~~f~ll-~~~~~-----~~~-~~~~~~~~---~~~~~~~~~-~~~~~~- 482 (535)
T 3ihg_A 420 GRPGFRGPHVLVS---RHGER--LSTVDLFGDGWTLL-AGELG-----ADW-VAAAEAVS---AELGVPVRA-YRVGAG- 482 (535)
T ss_dssp CCTTSBCCCCEEE---ETTEE--EEGGGGCSSSEEEE-ECTTC-----HHH-HHHHHHHH---HHHTCCEEE-EEBTTT-
T ss_pred CCCCCcCCCceee---cCCce--eeHHHhcCCceEEE-ecCCc-----cHH-HHHHHHHH---HhcCCceEE-EEeCCc-
Confidence 5689999998752 25765 88989864344444 43210 111 11122222 234554333 323220
Q ss_pred HHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 84 VMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+.|.++..++.||+.. .+.+||=|||-|-+.+..
T Consensus 483 -----------------~~d~~~~~~~~~~~~~-------------~~~~lvRPD~~va~r~~~ 516 (535)
T 3ihg_A 483 -----------------LTDPESAVSERYGIGK-------------AGASLVRPDGIVAWRTDE 516 (535)
T ss_dssp -----------------BBCSSCCHHHHHTCTT-------------TCEEEECTTSBEEEEESS
T ss_pred -----------------cccCcchHHHHhCCCC-------------CceEeeCCCceeEEecCC
Confidence 3578889999999863 238999999999877653
No 302
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=77.86 E-value=0.67 Score=30.93 Aligned_cols=56 Identities=7% Similarity=-0.033 Sum_probs=27.9
Q ss_pred hhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCC--CcEEEEEecC-CHHHHHHHHHH-hCC
Q 045485 31 DLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKG--VDIVACISVN-DAFVMKAWKEN-LGI 94 (164)
Q Consensus 31 d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~--v~vi~~is~d-~~~~~~~~~~~-~~~ 94 (164)
++.+..+++||. .+|||.|.+- ..-| ++....+ ..++- |..+ +.++.++++++ .|.
T Consensus 9 ~ii~~~~Vvvys--k~~Cp~C~~a-k~lL----~~~~~~~v~~~~id-id~~~d~~~~~~~l~~~~G~ 68 (127)
T 3l4n_A 9 LILDLSPIIIFS--KSTCSYSKGM-KELL----ENEYQFIPNYYIIE-LDKHGHGEELQEYIKLVTGR 68 (127)
T ss_dssp HHHTSCSEEEEE--CTTCHHHHHH-HHHH----HHHEEEESCCEEEE-GGGSTTHHHHHHHHHHHHSC
T ss_pred HHHccCCEEEEE--cCCCccHHHH-HHHH----HHhcccCCCcEEEE-ecCCCCHHHHHHHHHHHcCC
Confidence 333344554443 6899999974 3322 2221113 33444 3333 44566676654 354
No 303
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=77.75 E-value=1.1 Score=22.79 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=16.8
Q ss_pred CcCCCcCchhhHHHhHHHHHh
Q 045485 48 TPTCSQKHLPGFVEKSAELKS 68 (164)
Q Consensus 48 cp~C~~~~l~~l~~~~~~~~~ 68 (164)
||.|... +.....+...|.+
T Consensus 8 CP~C~~~-l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 8 CPQCMKS-LGSADELFKHYEA 27 (34)
T ss_dssp CTTTCCE-ESSHHHHHHHHHH
T ss_pred CcHHHHH-cCCHHHHHHHHHh
Confidence 9999998 8988888877753
No 304
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=76.85 E-value=1 Score=31.40 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=25.2
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhH-HHhHHHHHhC-CCcEEE
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGF-VEKSAELKSK-GVDIVA 75 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l-~~~~~~~~~~-~v~vi~ 75 (164)
++..|+.|+ ..-||.|..- -+.+ ..+.+++.+. ++.++.
T Consensus 11 a~~~i~~f~-D~~Cp~C~~~-~~~l~~~l~~~~~~~~~v~~~~ 51 (186)
T 3bci_A 11 GKPLVVVYG-DYKCPYCKEL-DEKVMPKLRKNYIDNHKVEYQF 51 (186)
T ss_dssp CCCEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTSSEEEE
T ss_pred CCeEEEEEE-CCCChhHHHH-HHHHHHHHHHHhccCCeEEEEE
Confidence 455555555 7889999986 6777 4555566533 466555
No 305
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=74.31 E-value=3.6 Score=29.63 Aligned_cols=31 Identities=6% Similarity=0.215 Sum_probs=19.1
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHh
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKS 68 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~ 68 (164)
+.++++|...||+.|... .+.+.+++.+++.
T Consensus 132 ~~~~l~f~~~~~~~~~~~-~~~~~~vAk~~k~ 162 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEEN-MHRYQKAAKLFQG 162 (227)
T ss_dssp CEEEEEEECTTSTTHHHH-HHHHHHHHHHTTT
T ss_pred ceEEEEEEcCCcchHHHH-HHHHHHHHHHhhC
Confidence 444444435577777664 6777777776653
No 306
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=72.71 E-value=1.3 Score=31.25 Aligned_cols=38 Identities=8% Similarity=0.014 Sum_probs=24.9
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
++.|+.|....||.|.+- -+.+.++.+++....++++.
T Consensus 15 ~vtiv~f~D~~Cp~C~~~-~~~~~~~l~~~~~g~v~~v~ 52 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKA-FFKLDDLLAQAGEDNVTVRI 52 (182)
T ss_dssp SEEEEEEECTTCHHHHHH-HTTHHHHHHHHCTTTEEEEE
T ss_pred CEEEEEEECCCCHhHHHH-HHHHHHHHHHhCCCCEEEEE
Confidence 444444447789999986 68888877665223466554
No 307
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=72.26 E-value=1 Score=29.55 Aligned_cols=60 Identities=13% Similarity=0.033 Sum_probs=37.4
Q ss_pred EecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec----CCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCC
Q 045485 42 AVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISV----NDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGC 114 (164)
Q Consensus 42 f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~----d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 114 (164)
+|..++||.|++. ... +.+.|+..-. +.. -+.+++++++++.|+. -+....+..++.+|.
T Consensus 9 iY~~~~C~~C~ka-~~~-------L~~~gi~y~~-~di~~~~~~~~~l~~~~~~~g~~----~l~n~~~~~~k~l~~ 72 (120)
T 2kok_A 9 IYGIKNCDTMKKA-RIW-------LEDHGIDYTF-HDYKKEGLDAETLDRFLKTVPWE----QLLNRAGTTFRKLPE 72 (120)
T ss_dssp EEECSSCHHHHHH-HHH-------HHHHTCCEEE-EEHHHHCCCHHHHHHHHHHSCGG----GTBCSSSHHHHHSCH
T ss_pred EEECCCChHHHHH-HHH-------HHHcCCcEEE-EeeeCCCCCHHHHHHHHHHcChH----hhccCCchhhHhcCc
Confidence 4447899999974 332 3335776544 322 2458888999888753 123455677777764
No 308
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=71.70 E-value=1.7 Score=31.56 Aligned_cols=12 Identities=17% Similarity=0.241 Sum_probs=5.7
Q ss_pred HHHHHHHHhCCC
Q 045485 84 VMKAWKENLGIN 95 (164)
Q Consensus 84 ~~~~~~~~~~~~ 95 (164)
.+++++++++++
T Consensus 185 ~a~~~L~~~~i~ 196 (241)
T 1nm3_A 185 KAKQLLHDKGLS 196 (241)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHcCCc
Confidence 334455555554
No 309
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=67.19 E-value=1.8 Score=30.93 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=26.1
Q ss_pred ehhhhcCCCcEEEEEecCCCCcCCCcCchhhH-HHhHHHHHhC-CCcEEE
Q 045485 28 TVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF-VEKSAELKSK-GVDIVA 75 (164)
Q Consensus 28 ~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l-~~~~~~~~~~-~v~vi~ 75 (164)
.+..- .++..|+.|+ ...||.|..- -+.+ ..+.+++.+. .|.++.
T Consensus 23 ~~G~~-~a~vtvvef~-D~~CP~C~~~-~~~~~~~l~~~~~~~g~v~~~~ 69 (202)
T 3gha_A 23 VLGKD-DAPVTVVEFG-DYKCPSCKVF-NSDIFPKIQKDFIDKGDVKFSF 69 (202)
T ss_dssp EESCT-TCSEEEEEEE-CTTCHHHHHH-HHHTHHHHHHHTTTTTSEEEEE
T ss_pred eecCC-CCCEEEEEEE-CCCChhHHHH-HHHhhHHHHHHhccCCeEEEEE
Confidence 34444 4555566666 7789999975 4554 3444455432 455554
No 310
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=66.83 E-value=4.1 Score=26.60 Aligned_cols=67 Identities=16% Similarity=0.172 Sum_probs=43.0
Q ss_pred EEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEE----ecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 40 LFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACI----SVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~i----s~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
+.+|....|+.|++. .. -+++.|+.+-. + .+-+.+++++|++..|++ ...-+....+..++.+++.
T Consensus 6 i~iY~~p~C~~c~ka-~~-------~L~~~gi~~~~-~di~~~~~t~~eL~~~l~~~g~~-~~~~l~n~~~~~~k~l~l~ 75 (119)
T 3f0i_A 6 VVIYHNPKCSKSRET-LA-------LLENQGIAPQV-IKYLETSPSVEELKRLYQQLGLN-EVRAMMRCKEELYKELNLG 75 (119)
T ss_dssp CEEECCTTCHHHHHH-HH-------HHHHTTCCCEE-ECHHHHCCCHHHHHHHHHHHTCS-SGGGGBCTTSHHHHHTTTT
T ss_pred EEEEECCCChHHHHH-HH-------HHHHcCCceEE-EEeccCcCcHHHHHHHHHHcCCc-cHHHHhcCCCchhhhcCcc
Confidence 345557789999974 32 23446776444 3 234789999999999864 1112345567888888765
Q ss_pred c
Q 045485 116 L 116 (164)
Q Consensus 116 ~ 116 (164)
.
T Consensus 76 ~ 76 (119)
T 3f0i_A 76 D 76 (119)
T ss_dssp C
T ss_pred c
Confidence 3
No 311
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=61.83 E-value=2 Score=25.95 Aligned_cols=36 Identities=14% Similarity=0.445 Sum_probs=24.6
Q ss_pred hhcCCCcEEEEEecCCCCcCCCcC-----chhhHHHhHHHHH
Q 045485 31 DLTSNKKAILFAVPGAFTPTCSQK-----HLPGFVEKSAELK 67 (164)
Q Consensus 31 d~~~g~~vvl~f~~~~~cp~C~~~-----~l~~l~~~~~~~~ 67 (164)
++ +|+.++|-..++.+|+.|=.. .+..+.++..+|+
T Consensus 23 ~~-~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 23 TF-RGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp EE-TTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred EE-CCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 46 788788888889999999432 2445555555554
No 312
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=61.28 E-value=2 Score=20.29 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=8.8
Q ss_pred CCcCCCcCchhh
Q 045485 47 FTPTCSQKHLPG 58 (164)
Q Consensus 47 ~cp~C~~~~l~~ 58 (164)
.||+|+.. +|.
T Consensus 8 qcpvcqq~-mpa 18 (29)
T 3vhs_A 8 QCPVCQQM-MPA 18 (29)
T ss_dssp ECTTTCCE-EEG
T ss_pred eChHHHHh-CcH
Confidence 49999986 765
No 313
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=60.97 E-value=4.2 Score=29.14 Aligned_cols=46 Identities=15% Similarity=0.064 Sum_probs=27.3
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHH-HHHhCC-CcEEE
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSA-ELKSKG-VDIVA 75 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~-~~~~~~-v~vi~ 75 (164)
..+.+- .++.+|+.|+ -.-||.|.+- -+.+..... ++.+.| ++++.
T Consensus 8 ~~~G~~-~a~vtivef~-D~~Cp~C~~~-~~~~~~~l~~~~i~~g~v~~v~ 55 (205)
T 3gmf_A 8 HLLGNP-AAKLRLVEFV-SYTCPHCSHF-EIESEGQLKIGMVQPGKGAIEV 55 (205)
T ss_dssp EEESCT-TCSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHTTTTTSEEEEE
T ss_pred ceecCC-CCCeEEEEEE-CCCCHHHHHH-HHHHHHHHHHHhccCCeEEEEE
Confidence 444444 4555555555 7889999986 566655554 553333 55543
No 314
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=59.03 E-value=25 Score=24.03 Aligned_cols=45 Identities=22% Similarity=0.180 Sum_probs=34.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCH---HHHHHHHHHhCCCCceEEE
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDA---FVMKAWKENLGINDEVLLL 101 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~---~~~~~~~~~~~~~~~~~~l 101 (164)
.|.+.++.+.++++|+.+.. +|..+. +.+...+++.|+...|..+
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i-~Tn~~~~~~~~~~~~l~~~gl~~~fd~i 83 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAI-LSNTATSDTEVIKRVLTNFGIIDYFDFI 83 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EECCSSCCHHHHHHHHHHTTCGGGEEEE
T ss_pred CcCHHHHHHHHHHCCCEEEE-EECCCccchHHHHHHHHhcCchhheEEE
Confidence 68888899999999998665 776543 7888899999986445433
No 315
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=57.54 E-value=3.6 Score=29.98 Aligned_cols=46 Identities=7% Similarity=-0.072 Sum_probs=27.5
Q ss_pred eehhhhcCCCcEEEEEecCCCCcCCCcCchhhH-HHhHHHHHhC-CCcEEE
Q 045485 27 ITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGF-VEKSAELKSK-GVDIVA 75 (164)
Q Consensus 27 ~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l-~~~~~~~~~~-~v~vi~ 75 (164)
..+.+- .++.+|+.|+ ...||.|..- -+.+ .++.+++-+. .+.++.
T Consensus 32 ~~~G~~-~A~vtIvef~-Dy~CP~C~~~-~~~~~~~l~~~~~~~g~V~~v~ 79 (226)
T 3f4s_A 32 KLLGDP-KAPILMIEYA-SLTCYHCSLF-HRNVFPKIKEKYIDTGKMLYIF 79 (226)
T ss_dssp CEESCT-TCSEEEEEEE-CTTCHHHHHH-HHHTHHHHHHHHTTTTSEEEEE
T ss_pred CccCCC-CCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHHcccCCeEEEEE
Confidence 344444 3455555665 6789999986 4544 5666667433 355544
No 316
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=57.20 E-value=30 Score=23.49 Aligned_cols=59 Identities=17% Similarity=0.051 Sum_probs=42.3
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCC-HHHHHHHHHHhCCCCceEEE--E-eCc----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVND-AFVMKAWKENLGINDEVLLL--S-DGN----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~-~~~~~~~~~~~~~~~~~~~l--~-D~~----~~~~~~~gv~ 115 (164)
.|...++.+.++++|+.++. +|..+ ......+++..++...|..+ . .++ ..+.+.+|+.
T Consensus 70 ~~g~~e~L~~L~~~G~~v~i-vT~~~~~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~ 136 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAA-ASRTSEIEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIP 136 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEE-EECCSCHHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCC
T ss_pred chhHHHHHHHHHHCCceEEE-EeCCCChHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCC
Confidence 57788888889989998766 88877 68888899999986445432 2 333 3445777764
No 317
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=53.91 E-value=19 Score=24.28 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=34.3
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCC---HHHHHHHHHHhCCCCceEEEEeC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVND---AFVMKAWKENLGINDEVLLLSDG 104 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~---~~~~~~~~~~~~~~~~~~~l~D~ 104 (164)
.+...+...+++++|..++. .+.-+ ......|+++++++ +.++...
T Consensus 26 ~~~~~~al~~l~~~G~~iii-~TgR~~~~~~~~~~~l~~~gi~--~~~I~~n 74 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLIL-WSVREGELLDEAIEWCRARGLE--FYAANKD 74 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-CCSCCHHHHHHHHHHHHTTTCC--CSEESSS
T ss_pred CHHHHHHHHHHHHCCCEEEE-EeCCCcccHHHHHHHHHHcCCC--eEEEEcC
Confidence 45566777788889998777 66654 56778899999998 7666653
No 318
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=53.26 E-value=30 Score=24.61 Aligned_cols=38 Identities=32% Similarity=0.285 Sum_probs=31.0
Q ss_pred hhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 57 PGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 57 ~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+...+..++++++|+.++. +|..+......++++.++.
T Consensus 25 ~~~~~~l~~l~~~g~~~~i-~TGr~~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 25 TKAIESIRSAEKKGLTVSL-LSGNVIPVVYALKIFLGIN 62 (227)
T ss_dssp HHHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEE-ECCCCcHHHHHHHHHhCCC
Confidence 4556666778889998777 8999999999999998887
No 319
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=53.08 E-value=50 Score=22.36 Aligned_cols=92 Identities=17% Similarity=0.108 Sum_probs=47.4
Q ss_pred HhHHHHHh-CCCcEEEEEecC-------CHHHHHHHHHHhCCCC-ceEEEEeCcchHHHHhCCccccCCCCCCCCc-cee
Q 045485 61 EKSAELKS-KGVDIVACISVN-------DAFVMKAWKENLGIND-EVLLLSDGNGVFTKAIGCELDLSDKPMGLGV-RSR 130 (164)
Q Consensus 61 ~~~~~~~~-~~v~vi~~is~d-------~~~~~~~~~~~~~~~~-~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~-~~p 130 (164)
+.-+.+++ .|..+|.|.|.= -|......++.-..++ ...+++..|.+...+..-+.. ++ |+.
T Consensus 36 ~Vd~a~~~~~GTtlVvVNSVCGCAag~ARPaa~~a~l~~~kkPD~lvTVFAGqDkEAt~~aR~yf~--------~~pPSS 107 (147)
T 3fhk_A 36 EVENFMEKAEGTTLVVVNSVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFT--------GAAPSS 107 (147)
T ss_dssp HHHHHHHHCCSEEEEEEECSSHHHHHTHHHHHHHHHHHCSSCCSEEEEEETTTSHHHHHHHHTTST--------TCCCCS
T ss_pred HHHHHHhcCCCcEEEEEeccccccccccCHHHHHHhhhcCCCCCceEEeccCCCHHHHHHHHHhcC--------CCCCCC
Confidence 33344555 777777755542 2333333223222232 367777766544333222211 23 444
Q ss_pred EEEEEecCCcEEEEEeecCCceeecCHHHHHh
Q 045485 131 RYALLAENGVVKVLNLEEGGAFTFSGAEDMLK 162 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~~~~~~~~~~~~~~~l~ 162 (164)
.++-+=+||+++|.--- -.+...+++.+.+
T Consensus 108 PS~ALfKdGelVh~ieR--h~IEGr~a~~Ia~ 137 (147)
T 3fhk_A 108 PSMALLKGKEVVHFIPR--HEIEGHDMEEIMK 137 (147)
T ss_dssp SEEEEEETTEEEEEECG--GGTTTSCHHHHHH
T ss_pred chheeeeCCEEEEEeeh--hhcCCCCHHHHHH
Confidence 57888899999886532 1355556666654
No 320
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=51.75 E-value=34 Score=23.71 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=32.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.+.. +|......++.+++.+|+.
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i-vS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCAL-VTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEE-EESSCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHHcCCC
Confidence 57788888889999988665 8888888888899999886
No 321
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=50.73 E-value=2.1 Score=28.17 Aligned_cols=70 Identities=10% Similarity=0.288 Sum_probs=43.2
Q ss_pred hhcCCCcEEEEEecCCCCcCCCcCchhh------HHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeC
Q 045485 31 DLTSNKKAILFAVPGAFTPTCSQKHLPG------FVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDG 104 (164)
Q Consensus 31 d~~~g~~vvl~f~~~~~cp~C~~~~l~~------l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (164)
++ +|..++|...++.+|+.|-.+ +-. +.+...++... +- -..=+++.+++++++.|++
T Consensus 23 ~~-kg~~~~v~~v~~~~C~~CGE~-~~d~e~~~~~~~~~~e~~r~---~~--~~~~~~~~l~~~R~~~gls--------- 86 (133)
T 3o9x_A 23 TF-RGRKTVLKGIHGLYCVHCEES-IMNKEESDAFMAQVKAFRAS---VN--AETVAPEFIVKVRKKLSLT--------- 86 (133)
T ss_dssp EE-TTEEEEEEEEEEEEESSSSCE-ECCHHHHHHHHHHHHHHHHH---HH--TTTCCHHHHHHHHHHTTCC---------
T ss_pred EE-CCEEEEECCCceeECCCCCCE-eecHHHHHHHHHHHHHHHHH---Hh--hcCCCHHHHHHHHHHcCCC---------
Confidence 45 677666665567789999654 322 12222222210 00 0122568899999999999
Q ss_pred cchHHHHhCCcc
Q 045485 105 NGVFTKAIGCEL 116 (164)
Q Consensus 105 ~~~~~~~~gv~~ 116 (164)
..++++.+|+..
T Consensus 87 q~~la~~~g~s~ 98 (133)
T 3o9x_A 87 QKEASEIFGGGV 98 (133)
T ss_dssp HHHHHHHHCSCT
T ss_pred HHHHHHHHCCCH
Confidence 788999999864
No 322
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=48.93 E-value=53 Score=21.40 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=38.9
Q ss_pred hHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcE
Q 045485 62 KSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVV 141 (164)
Q Consensus 62 ~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I 141 (164)
........|...++ +..++.++..+.++..|.+ +.. .+.. ..+ | +..|+-||+|.+
T Consensus 90 ~~~~~~~~g~~~l~-f~VdDvda~~~~l~~~Gv~--~~~--~p~~---~~~-------------g---~~~~f~DPdGn~ 145 (155)
T 4g6x_A 90 FKEALVADGIPAAS-FAVDDIAAEYERLSALGVR--FTQ--EPTD---MGP-------------V---VTAILDDTCGNL 145 (155)
T ss_dssp HHHHHHHTTCCSEE-EEESCHHHHHHHHHHTTCC--EEE--EEEE---CSS-------------C---EEEEEECSSSCE
T ss_pred cccccccCCceEEE-eeechhhhhhhHHhcCCcE--Eee--CCEE---cCC-------------e---EEEEEECCCCCE
Confidence 33344456666677 7888988888888888887 422 2210 001 1 446889999988
Q ss_pred EEEEe
Q 045485 142 KVLNL 146 (164)
Q Consensus 142 ~~~~~ 146 (164)
+.+.-
T Consensus 146 iel~q 150 (155)
T 4g6x_A 146 IQLMQ 150 (155)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76553
No 323
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=48.18 E-value=43 Score=21.92 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=27.0
Q ss_pred HHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 59 FVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 59 l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..+..+.++++|+.++. +|..+......+++++++.
T Consensus 41 ~~~~l~~l~~~g~~~~i-~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 41 DGIGIKLLQKMGITLAV-ISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp HHHHHHHHHTTTCEEEE-EESCCCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEE-EeCCCcHHHHHHHHHcCCH
Confidence 34666777778887665 7887777788888888876
No 324
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=45.53 E-value=26 Score=24.24 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=31.9
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.+.. +|..+.......++.+|+.
T Consensus 88 ~~g~~~~l~~L~~~g~~~~i-~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 88 TPGIRELVSRLQERNVQVFL-ISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHCCCcEEE-EeCChHHHHHHHHHHcCCC
Confidence 57778888888889998655 8888888888889998886
No 325
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=45.13 E-value=12 Score=26.42 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=19.1
Q ss_pred EEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEE
Q 045485 41 FAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIV 74 (164)
Q Consensus 41 ~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi 74 (164)
.+|.-.-||.|-.- .+.+.++.+++. .++.+.
T Consensus 6 ~~~~D~~CP~cy~~-~~~l~~l~~~~~-~~v~v~ 37 (208)
T 3kzq_A 6 YYVHDPMCSWCWGY-KPTIEKLKQQLP-GVIQFE 37 (208)
T ss_dssp EEEECTTCHHHHHH-HHHHHHHHHHSC-TTSEEE
T ss_pred EEEECCCCchhhhh-hHHHHHHHHhCC-CCceEE
Confidence 33335667777765 677777766653 345543
No 326
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=44.94 E-value=26 Score=21.70 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=23.4
Q ss_pred CCceeeeehhhhcCCCcEEEEEecCCCCcCCCcCchhhHH
Q 045485 21 AGELQTITVSDLTSNKKAILFAVPGAFTPTCSQKHLPGFV 60 (164)
Q Consensus 21 ~g~~~~~~l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~ 60 (164)
+|.. +.|-++ .++.+.|-+- |+ |..|... .-.++
T Consensus 26 dGGd--velv~v-~~g~V~V~L~-Ga-C~gCpss-~~TLk 59 (88)
T 1xhj_A 26 DGGD--CTLVDV-EDGIVKLQLH-GA-CGTCPSS-TITLK 59 (88)
T ss_dssp HSCE--EEEEEC-CSSEEEEEEE-SS-CCSSCHH-HHHHH
T ss_pred cCCe--EEEEEE-ECCEEEEEEe-ec-CCCCcch-HHHHH
Confidence 4554 899899 6665555554 55 9999876 66665
No 327
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=44.78 E-value=8.9 Score=26.95 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=22.1
Q ss_pred EEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEE
Q 045485 40 LFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 40 l~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
|.+|.-.-||.|-.. .+.+.++.+ +.+.++.+.-
T Consensus 10 I~~f~D~~CP~C~~~-~~~~~~l~~-~~~~~v~v~~ 43 (216)
T 2in3_A 10 LWYIADPMCSWCWGF-APVIENIRQ-EYSAFLTVKI 43 (216)
T ss_dssp EEEEECTTCHHHHHH-HHHHHHHHH-HHTTTCEEEE
T ss_pred EEEEECCCCchhhcc-hHHHHHHHh-cCCCCeEEEE
Confidence 444447789999964 666777655 5444576654
No 328
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=43.74 E-value=44 Score=22.59 Aligned_cols=43 Identities=19% Similarity=0.263 Sum_probs=32.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecC---------------CHHHHHHHHHHhCCCCceEEE
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVN---------------DAFVMKAWKENLGINDEVLLL 101 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d---------------~~~~~~~~~~~~~~~~~~~~l 101 (164)
.|...++.+.++++|+.++. +|.. ....+...++..++. |..+
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i-~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v 101 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVM-ITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEV 101 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEE-EEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEE
T ss_pred CccHHHHHHHHHHCCCEEEE-EECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEE
Confidence 57888888999999988655 7776 355677788889988 6443
No 329
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=43.16 E-value=13 Score=17.05 Aligned_cols=15 Identities=0% Similarity=-0.144 Sum_probs=12.1
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
++.|.|++|+++..-
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 479999999987643
No 330
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=42.75 E-value=50 Score=22.01 Aligned_cols=59 Identities=19% Similarity=0.156 Sum_probs=41.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEeC------c----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSDG------N----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D~------~----~~~~~~~gv~ 115 (164)
.+...++.+.+++.|+.+.. +|..+.+.....++..++...| .+.++. + ..+.+.+|+.
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 161 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLEIGL-ASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQ 161 (214)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred CchHHHHHHHHHHCCCCEEE-EeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCC
Confidence 45667778888888988666 8888888888889988875323 333331 1 2466778875
No 331
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=41.47 E-value=22 Score=27.44 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=33.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHH----hCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKEN----LGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~----~~~~ 95 (164)
.|.+.++.+.+++.|+.++. ||....+-++.|.++ +|++
T Consensus 145 ~~~~~~l~~~l~~~G~~v~i-vSas~~~~v~~~a~~~~~~ygIp 187 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYV-ISAAHEELVRMVAADPRYGYNAK 187 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHTCGGGSCCCC
T ss_pred CHHHHHHHHHHHHCCCEEEE-EeCCcHHHHHHHHhhcccccCCC
Confidence 68889999999999999888 899998889999887 5655
No 332
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=40.94 E-value=52 Score=21.98 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=32.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV 98 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~ 98 (164)
.|.+.++.+.+++.|+.+.. +|..+.+.....+++.++...|
T Consensus 86 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~~~~~f 127 (216)
T 2pib_A 86 NPGVREALEFVKSKRIKLAL-ATSTPQREALERLRRLDLEKYF 127 (216)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHTTCGGGC
T ss_pred CcCHHHHHHHHHHCCCCEEE-EeCCcHHhHHHHHHhcChHHhc
Confidence 46677778888888988666 8888888888888888875333
No 333
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=40.86 E-value=21 Score=22.03 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=13.5
Q ss_pred EEEEEecCCcEEEEEe
Q 045485 131 RYALLAENGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~ 146 (164)
+.+++|++|+|++...
T Consensus 17 gviv~D~~g~I~~~N~ 32 (121)
T 4hi4_A 17 NVMIADNDLNIIYMNR 32 (121)
T ss_dssp EEEEEETTCBEEEECH
T ss_pred cEEEEcCCCeEEEecH
Confidence 4899999999988653
No 334
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=40.73 E-value=20 Score=28.31 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=34.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGI 94 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~ 94 (164)
.|.+.++.+.+++.|+.++. ||....+-++.+.++.|+
T Consensus 223 ~p~~~eLi~~L~~~G~~v~I-VSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYI-VSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHHHHCCCeEEE-EcCCcHHHHHHHHHHhCc
Confidence 58999999999999999888 999999999999998764
No 335
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=40.49 E-value=64 Score=19.92 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=35.6
Q ss_pred HHHhHHHHHhCCCcEEEEEecCCHHHHHH----HHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 59 FVEKSAELKSKGVDIVACISVNDAFVMKA----WKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 59 l~~~~~~~~~~~v~vi~~is~d~~~~~~~----~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
+++....++...+.++. ++.|.++.... +.+.++++ +..+.....++.+..|..
T Consensus 20 ~~~v~kai~~gka~lVi-iA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~a~Gk~ 77 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLII-VAKNAPKEIKDDIYYYAKLSDIP--VYEFEGTSVELGTLLGKP 77 (99)
T ss_dssp HHHHHHHHHHTCCSEEE-EECCCCHHHHHHHHHHHHHTTCC--EEEECCCSCGGGGTTCST
T ss_pred HHHHHHHHHcCCccEEE-EeCCCCHHHHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHCCC
Confidence 34555666666677777 78886555443 45667777 766656667788888864
No 336
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=39.80 E-value=55 Score=22.11 Aligned_cols=42 Identities=26% Similarity=0.340 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV 98 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~ 98 (164)
.+.+.++.+.++++|+.+.. +|..........++..++...|
T Consensus 72 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~~~f 113 (205)
T 3m9l_A 72 APGAVELVRELAGRGYRLGI-LTRNARELAHVTLEAIGLADCF 113 (205)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHTTCGGGS
T ss_pred CccHHHHHHHHHhcCCeEEE-EeCCchHHHHHHHHHcCchhhc
Confidence 35566777888888988666 8888888888888888875334
No 337
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=39.52 E-value=64 Score=19.66 Aligned_cols=53 Identities=21% Similarity=0.159 Sum_probs=34.3
Q ss_pred CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEE
Q 045485 69 KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVL 144 (164)
Q Consensus 69 ~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~ 144 (164)
.+...++ +..++.++..+.+++.|.+ +. ..+.. ..+ +. +..++.|++|.+..+
T Consensus 80 ~g~~~~~-~~v~d~~~~~~~l~~~G~~--~~--~~~~~---~~~-------------g~--~~~~~~DPdG~~iel 132 (134)
T 3l7t_A 80 CGLRHLA-FYVEDVEASRQELIALGIR--VE--EVRYD---DYT-------------GK--KMAFFFDPDGLPLEL 132 (134)
T ss_dssp SEEEEEE-EECSCHHHHHHHHHHHTCC--CC--CCEEC---TTS-------------CC--EEEEEECTTCCEEEE
T ss_pred CCeEEEE-EEECCHHHHHHHHHhCCCc--cc--ceecc---CCC-------------ce--EEEEEECCCCCEEEE
Confidence 3455677 7888999999999999887 31 11000 001 11 458899999988654
No 338
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=39.04 E-value=56 Score=22.26 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=40.4
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEeCc----------chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSDGN----------GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D~~----------~~~~~~~gv~ 115 (164)
.+.+.++.+.+++.|+.+.. ++....+.....++..++...| .+.++.. ..+.+.+|+.
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~ 163 (233)
T 3s6j_A 93 LPGAVELLETLDKENLKWCI-ATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAP 163 (233)
T ss_dssp CTTHHHHHHHHHHTTCCEEE-ECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHCCCeEEE-EeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCC
Confidence 46667778888888988666 8888888888888888875323 3333321 2456777765
No 339
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=39.01 E-value=57 Score=18.97 Aligned_cols=27 Identities=11% Similarity=0.068 Sum_probs=23.1
Q ss_pred EEEEecCCHHHHHHHHHHhCCCCceEEEEe
Q 045485 74 VACISVNDAFVMKAWKENLGINDEVLLLSD 103 (164)
Q Consensus 74 i~~is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (164)
|. |+++......+++++++++ |.++.+
T Consensus 51 I~-V~p~~~~~f~~~L~~~~I~--y~Vlie 77 (78)
T 2gjf_A 51 IL-IPSDMVEWFLEMLKAKGIP--FTVYVE 77 (78)
T ss_dssp EE-ECTTSHHHHHHHHHHHTCC--EEEEEE
T ss_pred EE-ECHHHHHHHHHHHHHCCCc--EEEEeC
Confidence 45 7888999999999999999 888764
No 340
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=38.99 E-value=25 Score=19.35 Aligned_cols=15 Identities=20% Similarity=0.315 Sum_probs=12.7
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|++|+|++..
T Consensus 4 ~i~~~d~~g~i~~~N 18 (96)
T 3a0s_A 4 AIITLSKDGRITEWN 18 (96)
T ss_dssp EEEEEETTSBEEEEC
T ss_pred eEEEEcCCCCEeehh
Confidence 378999999998765
No 341
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=38.94 E-value=21 Score=29.45 Aligned_cols=17 Identities=29% Similarity=0.575 Sum_probs=11.5
Q ss_pred CcEEEEEecCCCCcCCCcC
Q 045485 36 KKAILFAVPGAFTPTCSQK 54 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~~ 54 (164)
+.++|+. .+|||.|..-
T Consensus 18 ~~v~vy~--~~~Cp~C~~~ 34 (598)
T 2x8g_A 18 AAVILFS--KTTCPYCKKV 34 (598)
T ss_dssp CSEEEEE--CTTCHHHHHH
T ss_pred CCEEEEE--CCCChhHHHH
Confidence 4454444 6799999963
No 342
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=38.47 E-value=21 Score=22.67 Aligned_cols=15 Identities=13% Similarity=0.151 Sum_probs=12.8
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
...|||++|+|++-.
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 489999999998754
No 343
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=37.71 E-value=60 Score=22.53 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=31.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCC---------------HHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVND---------------AFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~---------------~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.++. +|..+ .+.+...+++.++.
T Consensus 52 ~pg~~e~L~~L~~~G~~~~i-vTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 105 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFALVV-VTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD 105 (211)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCeEEE-EECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc
Confidence 57788888999999998666 78777 36677788888876
No 344
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=36.72 E-value=64 Score=22.27 Aligned_cols=39 Identities=23% Similarity=0.236 Sum_probs=30.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|.+.++.+.++++|+.+.. +|..+.......++..++.
T Consensus 85 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGFKLAV-VSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHCCCeEEE-EcCCCHHHHHHHHHHcCCH
Confidence 57777888888888887655 7888777788888888875
No 345
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=36.70 E-value=68 Score=21.82 Aligned_cols=59 Identities=12% Similarity=0.225 Sum_probs=40.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEeC------c----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSDG------N----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D~------~----~~~~~~~gv~ 115 (164)
.|.+.++.+.+++.|+.+.. +|..+.+.....++..++...| .+.++. + ..+.+.+|+.
T Consensus 98 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 168 (230)
T 3um9_A 98 FADVPQALQQLRAAGLKTAI-LSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLG 168 (230)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhCCCeEEE-EeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCC
Confidence 57777888888889988666 8888888888888888875323 333331 1 2456777775
No 346
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=36.69 E-value=17 Score=22.88 Aligned_cols=38 Identities=21% Similarity=0.080 Sum_probs=23.9
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGI 94 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~ 94 (164)
.|...++.+.++++|+.+.. +|..+.......++..++
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i-~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVI-LSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-EECSCCGGGGHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHHCCh
Confidence 45567777777777877555 666655545555555554
No 347
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=35.99 E-value=87 Score=20.99 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=27.5
Q ss_pred HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 60 VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 60 ~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.+..+.++++|+.++. +|.++.......+++.++.
T Consensus 41 ~~~l~~L~~~G~~~~i-~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 41 GLGIKMLMDADIQVAV-LSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp HHHHHHHHHTTCEEEE-EESCCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCeEEE-EeCCCcHHHHHHHHHcCCc
Confidence 3556777788988666 8888878888888888887
No 348
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=35.87 E-value=1.8 Score=34.20 Aligned_cols=16 Identities=6% Similarity=0.258 Sum_probs=9.5
Q ss_pred CcEEEEEecCCCCcCCCc
Q 045485 36 KKAILFAVPGAFTPTCSQ 53 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~ 53 (164)
..++|+. .+|||.|.+
T Consensus 261 ~~VvVYs--k~~CPyC~~ 276 (362)
T 2jad_A 261 NEIFVAS--KTYCPYSHA 276 (362)
T ss_dssp CSEEEEE--CTTCHHHHH
T ss_pred CCEEEEE--cCCCcchHH
Confidence 3444433 567888875
No 349
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=35.58 E-value=72 Score=22.09 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=30.5
Q ss_pred hhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 57 PGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 57 ~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
|.+.++.+.++++|+.+.. +|..+...+...++.+|+.
T Consensus 108 ~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 108 PDAAETLEKLKSAGYIVAI-LSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp TTHHHHHHHHHHTTCEEEE-EESSCHHHHHHHHHHTTCG
T ss_pred CCHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHHhcCcH
Confidence 6677778888888988666 7888877788888888875
No 350
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=35.43 E-value=69 Score=21.75 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=40.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEe------Cc----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSD------GN----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D------~~----~~~~~~~gv~ 115 (164)
.|.+.++.+.+++.|+.+.. +|..+.......++..++...| .+.+| |+ ..+.+++|+.
T Consensus 86 ~pg~~~~l~~L~~~g~~~~i-~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~ 156 (216)
T 3kbb_A 86 NPGVREALEFVKSKRIKLAL-ATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVV 156 (216)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHcCCCccc-ccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCC
Confidence 56777888888889987555 7888887888888888876434 33333 22 2446677775
No 351
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=35.39 E-value=39 Score=19.78 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=23.3
Q ss_pred EEEEecCCHHHHHHHHHHhCCCCceEEEEeC
Q 045485 74 VACISVNDAFVMKAWKENLGINDEVLLLSDG 104 (164)
Q Consensus 74 i~~is~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (164)
|. |+++......++++.++++ |.++.+.
T Consensus 43 i~-V~p~~~~~f~~~L~~~~i~--~~v~i~d 70 (79)
T 1vjq_A 43 IL-IPSDMVEWFLEMLKAKGIP--FTVYVEE 70 (79)
T ss_dssp EE-ECGGGHHHHHHHHHHTTCC--EEEEEEE
T ss_pred EE-ECHHHHHHHHHHHHHCCCc--EEEEehh
Confidence 45 7888888899999999999 8888754
No 352
>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1
Probab=35.35 E-value=85 Score=19.86 Aligned_cols=50 Identities=16% Similarity=0.014 Sum_probs=34.8
Q ss_pred CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEE-EEEecCCcEEEEEee
Q 045485 70 GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRY-ALLAENGVVKVLNLE 147 (164)
Q Consensus 70 ~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~-~lid~~G~I~~~~~~ 147 (164)
+...++ +..++.++..+.+++.|.+ +.-- +|. +.. ++.|++|.+..+...
T Consensus 77 ~~~h~~-f~v~d~~~~~~~l~~~G~~--~~~~----------~g~---------------~~~~~~~DPdG~~iel~~~ 127 (144)
T 2c21_A 77 AYGHIA-IGVEDVKELVADMRKHDVP--IDYE----------DES---------------GFMAFVVDPDGYYIELLNE 127 (144)
T ss_dssp SEEEEE-EEESCHHHHHHHHHHTTCC--EEEE----------CSS---------------SSEEEEECTTSCEEEEEEH
T ss_pred CceEEE-EEeCCHHHHHHHHHHCCCE--Eecc----------CCc---------------EEEEEEECCCCCEEEEEEc
Confidence 445577 7778888888888888887 4321 232 224 899999998777653
No 353
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=35.35 E-value=65 Score=23.58 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=41.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEE-EeCcchHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLL-SDGNGVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l-~D~~~~~~~~~gv~ 115 (164)
.|...++.+.++++|+.+.. +|.++...+...++..|+...|..+ ........+.+++.
T Consensus 165 ~~g~~~~l~~L~~~g~~~~i-~T~~~~~~~~~~l~~~gl~~~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 165 KESAKPAVQELKRMGIKVGM-ITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHCCCeEEE-EeCCCHHHHHHHHHHhCCceeeeecChHHHHHHHHHHhcC
Confidence 56777888889989998655 8888888888899999886222211 12335566777765
No 354
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=35.33 E-value=67 Score=22.55 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=29.9
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.+.. ++....+.+...++.+++.
T Consensus 116 ~~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 116 YPNVKETLEALKAQGYILAV-VTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHCCCEEEE-EECCcHHHHHHHHHHcCch
Confidence 35667777888888887655 7888877788888888865
No 355
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=35.01 E-value=97 Score=24.54 Aligned_cols=43 Identities=7% Similarity=-0.016 Sum_probs=35.0
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEE
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLL 101 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l 101 (164)
+..|..+.++++++|..++. ...+..+.+.+++++++.. -.+.
T Consensus 51 ~~sL~~l~~~L~~~g~~l~~-~~g~~~~~l~~l~~~~~~~--~v~~ 93 (420)
T 2j07_A 51 LENVRALREAYRARGGALWV-LEGLPWEKVPEAARRLKAK--AVYA 93 (420)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHHTTCS--EEEE
T ss_pred HHHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHcCCC--EEEE
Confidence 45677888899999999877 7788888899999999987 4444
No 356
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=34.99 E-value=1.4e+02 Score=24.01 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=42.0
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEe-Cc-------chHHHHhCCcc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSD-GN-------GVFTKAIGCEL 116 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D-~~-------~~~~~~~gv~~ 116 (164)
+..|..+.++++++|..++. ...+..+.+.+++++++.. -.+... .. ..+.+.+||..
T Consensus 91 ~~sL~~L~~~L~~~G~~L~v-~~g~~~~~l~~l~~~~~~~--~V~~~~~~~~~~~~~~~~v~~~lgi~~ 156 (482)
T 2xry_A 91 LKGLQELEVSLSRKKIPSFF-LRGDPGEKISRFVKDYNAG--TLVTDFSPLRIKNQWIEKVISGISIPF 156 (482)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHHTTCS--EEEEECCCSHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHHHHHcCCC--EEEEecccchhHHHHHHHHHHHcCCEE
Confidence 35678888899999999877 7788888999999999987 433332 22 34556667654
No 357
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=34.97 E-value=36 Score=23.17 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|.+.++.+.++++|+.+.. +|.........+++..++.
T Consensus 77 ~~~~~~~l~~l~~~g~~~~i-~S~~~~~~~~~~l~~~gl~ 115 (217)
T 3m1y_A 77 FEGALELVSALKEKNYKVVC-FSGGFDLATNHYRDLLHLD 115 (217)
T ss_dssp CBTHHHHHHHHHTTTEEEEE-EEEEEHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHCCCEEEE-EcCCchhHHHHHHHHcCcc
Confidence 46677888888888988666 8888888888888988886
No 358
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=34.83 E-value=1.1e+02 Score=23.25 Aligned_cols=73 Identities=11% Similarity=0.165 Sum_probs=45.9
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+-+++||.+|+. ..+... ...+.++.+++ .+ |++| -+..+.....++++..+-+ |.+++..+..
T Consensus 143 va~a-~~lPiilYn~P~~--tg~~l~-~~~~~~La~~~--pn--IvgiKdssgd~~~~~~l~~~~~~~--f~v~~G~d~~ 212 (315)
T 3si9_A 143 IAKA-ISIPIIIYNIPSR--SVIDMA-VETMRDLCRDF--KN--IIGVKDATGKIERASEQREKCGKD--FVQLSGDDCT 212 (315)
T ss_dssp HHHH-CSSCEEEEECHHH--HSCCCC-HHHHHHHHHHC--TT--EEEEEECSCCTHHHHHHHHHHCSS--SEEEESCGGG
T ss_pred HHHc-CCCCEEEEeCchh--hCCCCC-HHHHHHHHhhC--CC--EEEEEeCCCCHHHHHHHHHHcCCC--eEEEecCHHH
Confidence 3444 3678999998752 345554 55555555434 34 5662 2444567778888877766 9999987765
Q ss_pred HHHH
Q 045485 108 FTKA 111 (164)
Q Consensus 108 ~~~~ 111 (164)
+...
T Consensus 213 ~l~~ 216 (315)
T 3si9_A 213 ALGF 216 (315)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 359
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=34.56 E-value=72 Score=21.77 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=30.7
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|.+.++.+.++++|+.+.. +|..+.+.....++..++.
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 101 FPENVPVLRQLREMGLPLGI-LSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CTTHHHHHHHHHTTTCCEEE-EESSCHHHHHHHHHTTTCT
T ss_pred CCCHHHHHHHHHhCCCcEEE-EeCCCHHHHHHHHHHCCcH
Confidence 46667778888888988666 8888887888888888865
No 360
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.56 E-value=28 Score=20.71 Aligned_cols=15 Identities=13% Similarity=0.200 Sum_probs=12.8
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|++|+|++..
T Consensus 19 ~i~~~D~~g~I~~~N 33 (115)
T 3b33_A 19 ATLILDDGLAIRYAN 33 (115)
T ss_dssp EEEEECTTCBEEEEC
T ss_pred eEEEECCCCcEEEEC
Confidence 479999999998765
No 361
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=34.23 E-value=41 Score=23.43 Aligned_cols=39 Identities=13% Similarity=0.179 Sum_probs=31.2
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCH---------------HHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDA---------------FVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~---------------~~~~~~~~~~~~~ 95 (164)
.|...+..+.++++|+.++. +|..+. +.+...+++.|+.
T Consensus 58 ~~g~~e~L~~L~~~G~~~~i-~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 111 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIPVVV-VTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF 111 (218)
T ss_dssp CGGGHHHHHHHHHHTCCEEE-EEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHCCCEEEE-EcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc
Confidence 57778888889989998776 777766 5778888888865
No 362
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=34.04 E-value=80 Score=21.60 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=30.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.+.. +|..+...+...++..++.
T Consensus 97 ~~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 97 FSEVPDSLRELKRRGLKLAI-LSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EESSCHHHHHHHHHHTTCG
T ss_pred CccHHHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHhcChH
Confidence 36677778888888987665 7887777778888888875
No 363
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=33.94 E-value=92 Score=19.88 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=24.4
Q ss_pred EEEEecCCCCc--CC---CcCchhhHHHhHHHHHhCCCcEEE
Q 045485 39 ILFAVPGAFTP--TC---SQKHLPGFVEKSAELKSKGVDIVA 75 (164)
Q Consensus 39 vl~f~~~~~cp--~C---~~~~l~~l~~~~~~~~~~~v~vi~ 75 (164)
+-.|=|+-+|+ +| ...++-.+....+.++++|+.+-=
T Consensus 7 i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~R 48 (106)
T 3ktb_A 7 IEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTR 48 (106)
T ss_dssp EEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEE
Confidence 44566888887 34 222367777777888888877544
No 364
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=33.87 E-value=42 Score=21.54 Aligned_cols=29 Identities=14% Similarity=0.211 Sum_probs=24.0
Q ss_pred cEEEEEecCCHHHHHHHHHHhCCCCceEEEEe
Q 045485 72 DIVACISVNDAFVMKAWKENLGINDEVLLLSD 103 (164)
Q Consensus 72 ~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (164)
+-+- +.-++.|+..+|++++|+. |.|.-.
T Consensus 52 ~qv~-L~F~skE~AiayAek~G~~--y~V~ep 80 (106)
T 2jya_A 52 QQVK-LTFETQEQAEAYAQRKGIE--YRVILP 80 (106)
T ss_dssp EEEE-EEESSHHHHHHHHHHHTCE--EEECCC
T ss_pred ccce-EecCCHHHHHHHHHHcCCE--EEEeCC
Confidence 3455 7889999999999999999 877643
No 365
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=32.75 E-value=52 Score=22.61 Aligned_cols=59 Identities=14% Similarity=0.117 Sum_probs=39.9
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCc--eEEEEeC------c----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDE--VLLLSDG------N----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~--~~~l~D~------~----~~~~~~~gv~ 115 (164)
.+.+.++.+.++++|+.+.. +|..+.......++..++... ..+.++. + ..+.+.+|+.
T Consensus 105 ~~~~~~~l~~l~~~g~~~~i-~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~ 175 (231)
T 3kzx_A 105 NDGAIELLDTLKENNITMAI-VSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIE 175 (231)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHCCCeEEE-EECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCC
Confidence 46667778888888988666 787777788888888887532 3334431 1 3456777774
No 366
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=32.63 E-value=1.3e+02 Score=22.44 Aligned_cols=72 Identities=11% Similarity=0.161 Sum_probs=44.2
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+-+++||.+|+ ...+... ...+.++.+++ .+ |+++ -+..+.....+.++..+-+ |.+++..+..
T Consensus 121 ia~a-~~lPiilYn~P~--~tg~~l~-~~~~~~La~~~--pn--IvgiK~s~gd~~~~~~~~~~~~~~--f~v~~G~d~~ 190 (292)
T 2vc6_A 121 IDAA-STIPIIVYNIPG--RSAIEIH-VETLARIFEDC--PN--VKGVXDATGNLLRPSLERMACGED--FNLLTGEDGT 190 (292)
T ss_dssp HHHH-CSSCEEEEECHH--HHSCCCC-HHHHHHHHHHC--TT--EEEEEECSCCTHHHHHHHHHSCTT--SEEEESCGGG
T ss_pred HHHh-CCCCEEEEeCcc--ccCcCCC-HHHHHHHHhhC--CC--EEEEecCCCCHHHHHHHHHHcCCC--EEEEECchHH
Confidence 4454 367899999875 3344544 55556665323 34 5662 2444566777777776656 9999877765
Q ss_pred HHH
Q 045485 108 FTK 110 (164)
Q Consensus 108 ~~~ 110 (164)
+..
T Consensus 191 ~~~ 193 (292)
T 2vc6_A 191 ALG 193 (292)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 367
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=32.55 E-value=78 Score=20.43 Aligned_cols=52 Identities=21% Similarity=0.257 Sum_probs=23.9
Q ss_pred CCCcEEEEEecC----CCCcCCCcCchhhHHHhHHHHHhCCCc-EEEEEec-CCHHHHHHHHHHhCCC
Q 045485 34 SNKKAILFAVPG----AFTPTCSQKHLPGFVEKSAELKSKGVD-IVACISV-NDAFVMKAWKENLGIN 95 (164)
Q Consensus 34 ~g~~vvl~f~~~----~~cp~C~~~~l~~l~~~~~~~~~~~v~-vi~~is~-d~~~~~~~~~~~~~~~ 95 (164)
+..+|||+-= + +.||+|.+- .++ |.+.|+. ... +.. ++++......+..+.+
T Consensus 18 ~~~~VvvF~K-gt~~~P~C~fc~~a-----k~l---L~~~gv~~~~~-~~v~~~~~~r~~l~~~sg~~ 75 (118)
T 2wul_A 18 KKDKVVVFLK-GTPEQPQCGFSNAV-----VQI---LRLHGVRDYAA-YNVLDDPELRQGIKDYSNWP 75 (118)
T ss_dssp HHSSEEEEES-BCSSSBSSHHHHHH-----HHH---HHHTTCCSCEE-EETTSCHHHHHHHHHHHTCC
T ss_pred hcCCEEEEEc-CCCCCCCCHHHHHH-----HHH---HHHhCCcCeEe-ecccCCHHHHHHHHHhccCC
Confidence 4455665542 2 246666642 233 3445663 344 333 3444433444444543
No 368
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=31.43 E-value=63 Score=22.19 Aligned_cols=59 Identities=17% Similarity=0.278 Sum_probs=39.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEeC------c----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSDG------N----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D~------~----~~~~~~~gv~ 115 (164)
.+.+.++.+.++++|+.++. ++....+.....++..++...| .+.+|. + ..+.+.+|+.
T Consensus 106 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~ 176 (237)
T 4ex6_A 106 YPGVLEGLDRLSAAGFRLAM-ATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIP 176 (237)
T ss_dssp CTTHHHHHHHHHHTTEEEEE-ECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhCCCcEEE-EcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCC
Confidence 45566777788888887666 8888887788888888764223 333332 1 2456777775
No 369
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=31.32 E-value=1.2e+02 Score=22.58 Aligned_cols=68 Identities=9% Similarity=0.153 Sum_probs=43.4
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHH
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKA 111 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 111 (164)
+.+++||.+|+ ...+... ...+.++.+++ .+ .|++| -+..+.....++++..+ + |.+++..+..+...
T Consensus 133 ~lPiilYn~P~--~tg~~l~-~~~~~~La~~~--pn-~ivgiKds~gd~~~~~~~~~~~~-~--f~v~~G~d~~~l~~ 201 (294)
T 3b4u_A 133 ARDILVYNIPS--VTMVTLS-VELVGRLKAAF--PG-IVTGVKDSSGNWSHTERLLKEHG-D--LAILIGDERDLARG 201 (294)
T ss_dssp CCCEEEEECHH--HHSCCCC-HHHHHHHHHHC--TT-TEEEEEECCCCHHHHHHHHHHHT-T--SEEEECCHHHHHHH
T ss_pred CCcEEEEECcc--hhCcCCC-HHHHHHHHHhC--CC-cEEEEEECCCCHHHHHHHHHhCC-C--eEEEEccHHHHHHH
Confidence 57899999875 3344554 55566665343 33 15662 24456777788887777 7 99999877655443
No 370
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=31.26 E-value=35 Score=21.82 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=13.4
Q ss_pred EEEEEecCCcEEEEEe
Q 045485 131 RYALLAENGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~ 146 (164)
+.+++|.+|+|++...
T Consensus 19 ~i~~~D~~g~I~~~N~ 34 (129)
T 3mfx_A 19 AMILVNANGFIRSCNQ 34 (129)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred eEEEECCCCEEEeEhH
Confidence 4899999999988753
No 371
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=31.07 E-value=87 Score=22.17 Aligned_cols=39 Identities=28% Similarity=0.436 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...+..+.+++.|+.+.. ++.+........++..++.
T Consensus 146 ~~~~~~~l~~l~~~g~~~~i-~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 146 RPESREAISKLKAIGIKCMM-LTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHHTCS
T ss_pred CHhHHHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHHcCCh
Confidence 46677788888888987655 8888888888888988876
No 372
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=30.81 E-value=31 Score=28.53 Aligned_cols=35 Identities=20% Similarity=0.157 Sum_probs=24.7
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcC-CCcEEEEE
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTS-NKKAILFA 42 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~-g~~vvl~f 42 (164)
+.+|..+||+.+ .+.+|.. ..|.+++. ++++||.|
T Consensus 445 ~~~G~r~pd~~l--~~~~g~~--~~l~~~l~~~~~~ll~~ 480 (570)
T 3fmw_A 445 PWPGRFAGGLVL--SRPSGEP--VPVAELLRSARPLLLDL 480 (570)
T ss_dssp SSTTCBCTTCEE--CCSTTCC--EEHHHHSTTCCCEEECS
T ss_pred ccccCcCCCcee--ecCCCcc--eeHHHHhcCCeEEEEEe
Confidence 568999999985 3445654 78888764 46776665
No 373
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=30.29 E-value=65 Score=21.57 Aligned_cols=39 Identities=26% Similarity=0.318 Sum_probs=29.2
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.+...++.+.++++|+.+.. +|......+...++..++.
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 84 TDGIKELVQDLKNKGFEIWI-FSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHHTCC
T ss_pred ChhHHHHHHHHHHCCCeEEE-EcCCcHHHHHHHHHHcCCC
Confidence 35566777778888887655 7777777778888888875
No 374
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=30.06 E-value=36 Score=20.68 Aligned_cols=16 Identities=19% Similarity=0.183 Sum_probs=13.2
Q ss_pred EEEEEecCCcEEEEEe
Q 045485 131 RYALLAENGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~ 146 (164)
+.+++|++|+|++...
T Consensus 24 ~i~~~D~~g~i~~~N~ 39 (118)
T 3fg8_A 24 GFMALDEDLRIIYVNS 39 (118)
T ss_dssp EEEEECTTCBEEEECH
T ss_pred eEEEECCCCeEEEECH
Confidence 4789999999988653
No 375
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=30.06 E-value=44 Score=25.41 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=13.2
Q ss_pred CCCCcCCCcCchhhHHHhHHHHH
Q 045485 45 GAFTPTCSQKHLPGFVEKSAELK 67 (164)
Q Consensus 45 ~~~cp~C~~~~l~~l~~~~~~~~ 67 (164)
..+|+.|... ++.+.+++.+++
T Consensus 254 ~~~~~~~~~~-~~~~~~vA~~~~ 275 (350)
T 1sji_A 254 ERSDPDGYEF-LEILKQVARDNT 275 (350)
T ss_dssp CTTSHHHHHH-HHHHHHHHHHGG
T ss_pred cCCCccHHHH-HHHHHHHHHHhC
Confidence 4566666654 666666666664
No 376
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=29.63 E-value=94 Score=18.65 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=33.8
Q ss_pred CCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEE
Q 045485 69 KGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVL 144 (164)
Q Consensus 69 ~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~ 144 (164)
.+...++ +..++.++..+.+++.|.. +. ..+.. ..+ |. +..++.|++|.+...
T Consensus 72 ~g~~~~~-~~v~d~~~~~~~l~~~G~~--~~--~~~~~---~~~-------------g~--~~~~~~DPdG~~iel 124 (126)
T 2p25_A 72 LGLRHLA-FKVEHIEEVIAFLNEQGIE--TE--PLRVD---DFT-------------GK--KMTFFFDPDGLPLEL 124 (126)
T ss_dssp SSCCCEE-EECSCHHHHHHHHHHTTCC--CC--CCEEC---TTT-------------CC--EEEEEECTTCCEEEE
T ss_pred ccceEEE-EEeCCHHHHHHHHHHcCCc--cc--ccccc---CCC-------------Cc--EEEEEECCCCCEEEe
Confidence 3555577 7788888888888888877 31 11000 011 11 447899999988654
No 377
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=29.46 E-value=50 Score=21.26 Aligned_cols=25 Identities=20% Similarity=0.208 Sum_probs=21.9
Q ss_pred EecCCHHHHHHHHHHhCCCCceEEEEe
Q 045485 77 ISVNDAFVMKAWKENLGINDEVLLLSD 103 (164)
Q Consensus 77 is~d~~~~~~~~~~~~~~~~~~~~l~D 103 (164)
+.-++.|+..+|++++|+. |.|.-.
T Consensus 64 L~F~skE~AiayAek~G~~--y~V~ep 88 (108)
T 2lju_A 64 LSFTTRELAIAYAVAHKID--YTVLQD 88 (108)
T ss_dssp EEESSHHHHHHHHHHTTCE--EEEECS
T ss_pred EecCCHHHHHHHHHHcCCE--EEEecC
Confidence 6789999999999999999 887743
No 378
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=29.32 E-value=39 Score=22.60 Aligned_cols=16 Identities=13% Similarity=0.187 Sum_probs=13.5
Q ss_pred EEEEEecCCcEEEEEe
Q 045485 131 RYALLAENGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~ 146 (164)
+.+++|++|+|++...
T Consensus 34 gi~v~D~~g~I~~~N~ 49 (152)
T 3mxq_A 34 ALCIVRNDYVIVKVNE 49 (152)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred CEEEEcCCCEEEEECH
Confidence 4899999999988754
No 379
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=29.22 E-value=1.1e+02 Score=19.43 Aligned_cols=53 Identities=15% Similarity=0.041 Sum_probs=35.3
Q ss_pred HHhHHHHHhCCCcEEEEEecCCHH----HHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 60 VEKSAELKSKGVDIVACISVNDAF----VMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 60 ~~~~~~~~~~~v~vi~~is~d~~~----~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
++....++...+.+|. ++.|-+. .+..+...++++ +..+.+...++.+..|..
T Consensus 32 ~~t~kai~~gkakLVi-lA~D~~~~~~~~i~~~c~~~~ip--v~~~~~s~~eLG~A~Gk~ 88 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLII-LANNCPPLRKSEIETYAMLAKIS--VHHFHGNNVDLGTACGKY 88 (112)
T ss_dssp HHHHHHHHTTCCSEEE-ECSCCCHHHHHHHHHHHHHTTCC--EECCCCTTCTHHHHHCTT
T ss_pred HHHHHHHHcCCceEEE-EeCCCCHHHHHHHHHHHHHcCCc--EEEeCCCHHHHHHHhCCc
Confidence 3445556655566666 7777433 334456778888 777656678888988875
No 380
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=29.17 E-value=70 Score=21.51 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=24.2
Q ss_pred hHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 62 KSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 62 ~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..+.++++|+.+.. +|.++...++.+++..++.
T Consensus 47 ~l~~L~~~g~~~~i-~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLI-LSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp HHHHHHHTTCEEEE-EESSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEE-EECcChHHHHHHHHHcCCe
Confidence 45667778887555 7877777777888887775
No 381
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=29.13 E-value=80 Score=23.80 Aligned_cols=39 Identities=21% Similarity=0.287 Sum_probs=33.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.+.. +|......+...++++|+.
T Consensus 181 ~pg~~e~L~~Lk~~G~~v~I-vSn~~~~~~~~~l~~lgl~ 219 (317)
T 4eze_A 181 SPGLLTILPVIKAKGFKTAI-ISGGLDIFTQRLKARYQLD 219 (317)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHHTCS
T ss_pred CcCHHHHHHHHHhCCCEEEE-EeCccHHHHHHHHHHcCCC
Confidence 56778888889999998666 8888888889999999987
No 382
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=29.06 E-value=1e+02 Score=18.92 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=36.2
Q ss_pred CCcEEEEEecCCHHHHHHHHHHhCCCCceE-----EEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEE
Q 045485 70 GVDIVACISVNDAFVMKAWKENLGINDEVL-----LLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVL 144 (164)
Q Consensus 70 ~v~vi~~is~d~~~~~~~~~~~~~~~~~~~-----~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~ 144 (164)
+...++ +..++.++..+.+++.|.. +. ++..+.. ..+|. +..++.||+|.+...
T Consensus 58 ~~~~~~-~~v~dv~~~~~~l~~~G~~--~~~~~~~~~~~~~~---~~~g~---------------~~~~~~DPdG~~iel 116 (126)
T 1ecs_A 58 SWFSCC-LRLDDLAEFYRQCKSVGIQ--ETSSGYPRIHAPEL---QGWGG---------------TMAALVDPDGTLLRL 116 (126)
T ss_dssp CCCEEE-EEESCHHHHHHHHHHTTCC--BCSSSSSEEEEEEE---CTTSS---------------EEEEEECTTSCEEEE
T ss_pred cceEEE-EEECCHHHHHHHHHHCCCc--cccccCccccCCcc---cCccc---------------EEEEEECCCCCEEEE
Confidence 344566 6778888888888888877 41 2222210 01221 458999999998777
Q ss_pred Eee
Q 045485 145 NLE 147 (164)
Q Consensus 145 ~~~ 147 (164)
...
T Consensus 117 ~~~ 119 (126)
T 1ecs_A 117 IQN 119 (126)
T ss_dssp EEC
T ss_pred ecc
Confidence 653
No 383
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=29.03 E-value=42 Score=19.95 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=12.6
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|++|+|++..
T Consensus 31 ~i~~~d~~g~i~~~N 45 (125)
T 3fc7_A 31 GIVHLTTNGTILSVN 45 (125)
T ss_dssp EEEEEETTSBEEEEC
T ss_pred eEEEEcCCCeEEEEC
Confidence 478999999998764
No 384
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=29.01 E-value=5.9 Score=26.13 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=19.4
Q ss_pred CcEEEEEecCCCCcCCCcCchhhHHHhHHHH
Q 045485 36 KKAILFAVPGAFTPTCSQKHLPGFVEKSAEL 66 (164)
Q Consensus 36 ~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 66 (164)
|.++|.|- .+.|+.|... ...+.++.+++
T Consensus 2 K~tLILfG-KP~C~vCe~~-s~~l~~ledeY 30 (124)
T 2g2q_A 2 KNVLIIFG-KPYCSICENV-SDAVEELKSEY 30 (124)
T ss_dssp CEEEEEEE-CTTCHHHHHH-HHHHHTTTTTE
T ss_pred CceEEEeC-CCccHHHHHH-HHHHHHhhccc
Confidence 44666665 7899999986 55555554443
No 385
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=28.59 E-value=65 Score=24.01 Aligned_cols=39 Identities=21% Similarity=0.220 Sum_probs=32.2
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecC----CHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVN----DAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d----~~~~~~~~~~~~~~~ 95 (164)
+|...++.+.++++|+.++. ||.- ..+....+++++|++
T Consensus 103 ~pG~~ell~~L~~~G~ki~i-vTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 103 VPGAVEFNNYVNSHNGKVFY-VTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CTTHHHHHHHHHHTTEEEEE-EEEEETTTTHHHHHHHHHHHTCS
T ss_pred CccHHHHHHHHHHCCCeEEE-EeCCCccchHHHHHHHHHHcCcC
Confidence 68888999999999998777 6632 357888999999998
No 386
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=28.34 E-value=68 Score=22.19 Aligned_cols=59 Identities=8% Similarity=0.018 Sum_probs=39.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCc--eEEEEeCc----------chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDE--VLLLSDGN----------GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~--~~~l~D~~----------~~~~~~~gv~ 115 (164)
.|.+.++.+.++++|+.+.. +|..........++..++... ..+.+|.. ..+.+.+|+.
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~ 182 (240)
T 3sd7_A 112 YENMKEILEMLYKNGKILLV-ATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVK 182 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHCCCeEEE-EeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCC
Confidence 45566777788888887665 777777778888888887532 34444421 2466777875
No 387
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=28.23 E-value=45 Score=19.79 Aligned_cols=15 Identities=13% Similarity=0.033 Sum_probs=12.9
Q ss_pred EEEEEecC-CcEEEEE
Q 045485 131 RYALLAEN-GVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~-G~I~~~~ 145 (164)
+.+++|++ |+|++..
T Consensus 10 ~i~~~d~~~g~I~~~N 25 (114)
T 1ll8_A 10 AIFTVDAKTTEILVAN 25 (114)
T ss_dssp EEEEEETTTCBEEEEC
T ss_pred eEEEEECCCCeEEEeh
Confidence 58999999 9998865
No 388
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=28.20 E-value=1.1e+02 Score=25.05 Aligned_cols=39 Identities=13% Similarity=0.308 Sum_probs=32.7
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+..|..+.++++++|..++. ...+..+.+.+++++++.+
T Consensus 99 ~~sL~~L~~~L~~~G~~L~v-~~g~~~~~l~~l~~~~~~~ 137 (525)
T 2j4d_A 99 MECLVDLRKNLMKRGLNLLI-RSGKPEEILPSLAKDFGAR 137 (525)
T ss_dssp HHHHHHHHHHHHHTTCCCEE-EESCHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHHHHcCCC
Confidence 45578888899999999777 7788888889999999887
No 389
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=28.03 E-value=42 Score=22.29 Aligned_cols=17 Identities=6% Similarity=0.215 Sum_probs=14.8
Q ss_pred EEEEEecCCcEEEEEee
Q 045485 131 RYALLAENGVVKVLNLE 147 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~~ 147 (164)
+.+++|++|+|++....
T Consensus 31 gI~~vD~~g~I~~~N~a 47 (151)
T 2qkp_A 31 EITFVNKDDIFQYYNDS 47 (151)
T ss_dssp EEEEEETTSBEEEECCC
T ss_pred ceEEEcCCCeEEEEeCC
Confidence 48999999999998765
No 390
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=28.00 E-value=1.2e+02 Score=24.57 Aligned_cols=43 Identities=7% Similarity=0.135 Sum_probs=34.7
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEE
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLL 101 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l 101 (164)
+..|..+.++++++|..++. ...+..+.+.+++++++.. -.+.
T Consensus 56 ~~sL~~L~~~L~~~G~~L~v-~~g~~~~~l~~l~~~~~~~--~v~~ 98 (484)
T 1owl_A 56 QGCLQELQQRYQQAGSRLLL-LQGDPQHLIPQLAQQLQAE--AVYW 98 (484)
T ss_dssp HHHHHHHHHHHHHHTSCEEE-EESCHHHHHHHHHHHTTCS--EEEE
T ss_pred HHHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHcCCC--EEEE
Confidence 45577888889999999877 7788888899999999987 4444
No 391
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.96 E-value=1.9e+02 Score=21.55 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=45.2
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+-+++||.+|+. ..+... ...+.++.+++ .+ |++| -+..+.....++++..+-+ |.+++..+..
T Consensus 121 va~a-~~lPiilYn~P~~--tg~~l~-~~~~~~La~~~--pn--ivgiKds~gd~~~~~~~~~~~~~~--f~v~~G~d~~ 190 (294)
T 2ehh_A 121 VAQE-VDIPIIIYNIPSR--TCVEIS-VDTMFKLASEC--EN--IVASKESTPNMDRISEIVKRLGES--FSVLSGDDSL 190 (294)
T ss_dssp HHHH-CCSCEEEEECHHH--HSCCCC-HHHHHHHHHHC--TT--EEEEEECCSCHHHHHHHHHHHCTT--SEEEESSGGG
T ss_pred HHHh-cCCCEEEEeCCcc--cCcCCC-HHHHHHHHhhC--CC--EEEEEeCCCCHHHHHHHHHhcCCC--eEEEECcHHH
Confidence 4454 3678999998752 344554 55566665343 33 5662 2444677777887776656 9999887765
Q ss_pred HHH
Q 045485 108 FTK 110 (164)
Q Consensus 108 ~~~ 110 (164)
+..
T Consensus 191 ~~~ 193 (294)
T 2ehh_A 191 TLP 193 (294)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 392
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=27.64 E-value=91 Score=21.84 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=29.9
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.+.+.++.+.++++|+.+.. ++..+.......++..++.
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i-~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 112 IEGAAETLRALRAAGVPFAI-GSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CTTHHHHHHHHHHHTCCEEE-ECSSCHHHHHHHHHHTTCH
T ss_pred CccHHHHHHHHHHCCCeEEE-EeCCCHHHHHHHHHhcChH
Confidence 45566777788888888666 8888887888888888864
No 393
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=27.46 E-value=1.1e+02 Score=20.93 Aligned_cols=45 Identities=16% Similarity=0.089 Sum_probs=28.3
Q ss_pred CCcCCCcC-----chhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhC
Q 045485 47 FTPTCSQK-----HLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLG 93 (164)
Q Consensus 47 ~cp~C~~~-----~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~ 93 (164)
.||.|-.+ ..+.+..+.+..++.|..+.. ||.++.+ -.++++.+|
T Consensus 105 ~c~~~g~~~~~~e~~~~ve~L~e~~~~~G~~v~i-vs~~~ee-G~ql~~~fG 154 (166)
T 3ir9_A 105 NCPKCGSSLEVTDVTDIVDEFSELADKSNAKVVF-VSTDFDE-GSQLMNAFG 154 (166)
T ss_dssp BCTTTCCBEEEEEEEEHHHHHHHHHHHTTCEEEE-ECSCSHH-HHHHHHTST
T ss_pred cccccCccchhhhHHHHHHHHHHHHHhcCCEEEE-ECCCChh-HHHHHHcCC
Confidence 37777542 013455777778888888777 7777643 345655553
No 394
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=27.45 E-value=1.1e+02 Score=19.86 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=25.2
Q ss_pred hHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 62 KSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 62 ~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..+.++++|+.+.. +|.++.......++++++.
T Consensus 39 ~l~~l~~~g~~~~i-~T~~~~~~~~~~~~~~gl~ 71 (164)
T 3e8m_A 39 GIFWAHNKGIPVGI-LTGEKTEIVRRRAEKLKVD 71 (164)
T ss_dssp HHHHHHHTTCCEEE-ECSSCCHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCEEEE-EeCCChHHHHHHHHHcCCC
Confidence 35667778888666 8888777788888888876
No 395
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=27.37 E-value=91 Score=21.11 Aligned_cols=33 Identities=15% Similarity=0.181 Sum_probs=24.7
Q ss_pred hHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 62 KSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 62 ~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..+.+++.|+.++. +|.++......+++++|+.
T Consensus 61 ~l~~L~~~g~~v~i-vT~~~~~~~~~~l~~lgl~ 93 (188)
T 2r8e_A 61 GIRCALTSDIEVAI-ITGRKAKLVEDRCATLGIT 93 (188)
T ss_dssp HHHHHHTTTCEEEE-ECSSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEE-EeCCChHHHHHHHHHcCCc
Confidence 45667778887665 8887777778888888876
No 396
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=27.31 E-value=89 Score=22.28 Aligned_cols=19 Identities=16% Similarity=0.242 Sum_probs=10.8
Q ss_pred HHHHHHHHhCCCCceEEEEeC
Q 045485 84 VMKAWKENLGINDEVLLLSDG 104 (164)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~D~ 104 (164)
++.+.++.++.+ +.++...
T Consensus 70 ~~~~~l~~~~~D--liv~a~y 88 (209)
T 1meo_A 70 AIDLVLEEFSID--IVCLAGF 88 (209)
T ss_dssp HHHHHHHHTTCC--EEEEESC
T ss_pred HHHHHHHhcCCC--EEEEcch
Confidence 344555666666 6666653
No 397
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=27.18 E-value=16 Score=25.60 Aligned_cols=18 Identities=11% Similarity=0.030 Sum_probs=12.1
Q ss_pred CcceeEEEEEecCCcEEEEEe
Q 045485 126 GVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 126 ~~~~p~~~lid~~G~I~~~~~ 146 (164)
|+| +|+|+.+|+.+....
T Consensus 169 g~P---t~~v~~~~~~~~~~~ 186 (208)
T 3kzq_A 169 SYP---SLVLQINDAYFPIEV 186 (208)
T ss_dssp SSS---EEEEEETTEEEEECC
T ss_pred ccc---EEEEEECCEEEEeeC
Confidence 555 488888888755444
No 398
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=27.01 E-value=48 Score=21.74 Aligned_cols=17 Identities=18% Similarity=0.120 Sum_probs=14.1
Q ss_pred EEEEEecCCcEEEEEee
Q 045485 131 RYALLAENGVVKVLNLE 147 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~~ 147 (164)
+.+++|++|+|++....
T Consensus 29 Gii~lD~~g~I~~~N~~ 45 (125)
T 1nwz_A 29 GAIQLDGDGNILQYNAA 45 (125)
T ss_dssp EEEEEETTCBEEEECHH
T ss_pred eEEEECCCCEEEEEHHH
Confidence 58999999999887643
No 399
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=26.80 E-value=1.1e+02 Score=20.71 Aligned_cols=29 Identities=3% Similarity=0.066 Sum_probs=22.0
Q ss_pred EEEEecCCcEEEEEeecCCceeecCHHHH
Q 045485 132 YALLAENGVVKVLNLEEGGAFTFSGAEDM 160 (164)
Q Consensus 132 ~~lid~~G~I~~~~~~~~~~~~~~~~~~~ 160 (164)
.+++|..|+|.....++...+-..++|+.
T Consensus 112 LvimD~kGRiLtas~SPs~~iHk~~ie~~ 140 (156)
T 3brc_A 112 LVIMDSRGRLLSAAMSPPHVIHSMEVREA 140 (156)
T ss_dssp EEEEETTSCEEEEEEECCTTTSCCCHHHH
T ss_pred EEEEcCCCcEEeeccCchhhhhcccHHHH
Confidence 67889999999999987655555565554
No 400
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=26.67 E-value=1.1e+02 Score=24.76 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+..|..+.++++++|..++. ...+..+.+.+++++++.+
T Consensus 64 ~~sL~~L~~~L~~~G~~L~v-~~g~~~~~l~~l~~~~~~~ 102 (489)
T 1np7_A 64 QQSVQNLAESLQKVGNKLLV-TTGLPEQVIPQIAKQINAK 102 (489)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCCcEEE-EECCHHHHHHHHHHHcCCC
Confidence 45678888899999999877 7777778888888888775
No 401
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=26.43 E-value=1.9e+02 Score=21.82 Aligned_cols=72 Identities=14% Similarity=0.107 Sum_probs=44.2
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+-+++||.+|+. ..+... ...+.++..++ .+ |++| -+..+.....+.++..+-+ |.+++..+..
T Consensus 145 va~a-~~lPiilYn~P~~--tg~~l~-~~~~~~L~a~~--pn--IvgiKdssgd~~~~~~~~~~~~~~--f~v~~G~D~~ 214 (315)
T 3na8_A 145 VGEA-IGVPVMLYNNPGT--SGIDMS-VELILRIVREV--DN--VTMVKESTGDIQRMHKLRLLGEGR--VPFYNGCNPL 214 (315)
T ss_dssp HHHH-CSSCEEEEECHHH--HSCCCC-HHHHHHHHHHS--TT--EEEEEECSSCHHHHHHHHHHTTTC--SCEEECCGGG
T ss_pred HHHh-CCCcEEEEeCcch--hCcCCC-HHHHHHHHhcC--CC--EEEEECCCCCHHHHHHHHHHcCCC--EEEEeCchHH
Confidence 3444 3678999998752 344444 44555553443 33 5662 2344677778888777656 9999987765
Q ss_pred HHH
Q 045485 108 FTK 110 (164)
Q Consensus 108 ~~~ 110 (164)
+..
T Consensus 215 ~l~ 217 (315)
T 3na8_A 215 ALE 217 (315)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 402
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=26.43 E-value=1.1e+02 Score=18.50 Aligned_cols=10 Identities=10% Similarity=0.162 Sum_probs=4.3
Q ss_pred hHHHhHHHHH
Q 045485 58 GFVEKSAELK 67 (164)
Q Consensus 58 ~l~~~~~~~~ 67 (164)
.+.+..++|+
T Consensus 37 elkkyleefr 46 (110)
T 2kpo_A 37 ELKKYLEEFR 46 (110)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 403
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=26.30 E-value=47 Score=19.95 Aligned_cols=16 Identities=13% Similarity=0.096 Sum_probs=13.8
Q ss_pred EEEEecCCcEEEEEee
Q 045485 132 YALLAENGVVKVLNLE 147 (164)
Q Consensus 132 ~~lid~~G~I~~~~~~ 147 (164)
.|.||++|+|....+.
T Consensus 30 ~~~i~~~G~v~~~~v~ 45 (90)
T 1u07_A 30 KFDVTPDGRVDNVQIL 45 (90)
T ss_dssp EEEECTTSCEEEEEEE
T ss_pred EEEECCCCCEEEEEEE
Confidence 7999999999887764
No 404
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=26.15 E-value=83 Score=23.39 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=32.2
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecC----CHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVN----DAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d----~~~~~~~~~~~~~~~ 95 (164)
+|...++.+.++++|+.++. |+.- ..+....+++++|++
T Consensus 103 ~pg~~ell~~L~~~G~~i~i-vTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 103 IPGAVEFSNYVNANGGTMFF-VSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEETTTSHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHCCCeEEE-EeCCCccccHHHHHHHHHHcCcC
Confidence 78889999999999998777 6543 346888999999998
No 405
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=26.09 E-value=1.9e+02 Score=23.40 Aligned_cols=57 Identities=16% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCcCCCcCchhhHHHhHHHHHhCCCcEEEEEec------CCHHHHHHHHHH------hCCCCceEEEEeC
Q 045485 47 FTPTCSQKHLPGFVEKSAELKSKGVDIVACISV------NDAFVMKAWKEN------LGINDEVLLLSDG 104 (164)
Q Consensus 47 ~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~------d~~~~~~~~~~~------~~~~~~~~~l~D~ 104 (164)
|=-....+++.+|+++.+.-++.+|.++-.||+ +..++.+..+++ .|.+ .|.++.|.
T Consensus 48 WRe~Yp~eel~~l~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lGVr-~FaIlfDD 116 (447)
T 2xsa_A 48 WRVPYDAAGLARLTELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLR-NLVLLFDD 116 (447)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTTCC-EEEEECSS
T ss_pred hcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhCCC-EEEEeccC
Confidence 333344445888999999888899987666888 345555554444 4655 68998874
No 406
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=26.08 E-value=47 Score=19.40 Aligned_cols=15 Identities=20% Similarity=0.040 Sum_probs=12.4
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|++|+|++..
T Consensus 25 ~i~~~d~~g~i~~~N 39 (118)
T 3olo_A 25 ASFCLGDNWQFLYVN 39 (118)
T ss_dssp EEEEECTTSBEEEEC
T ss_pred eEEEECCCCcEEEEH
Confidence 478999999998764
No 407
>3twl_A Formamidopyrimidine-DNA glycosylase 1; helix two turns helix, zinc-LESS finger, hydrolase, DNA DAMA repair, DNA-binding, glycosidase, lyase; 1.70A {Arabidopsis thaliana} PDB: 3twm_A* 3twk_A
Probab=26.07 E-value=19 Score=27.72 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=10.9
Q ss_pred CCCCcCCCcCchhhHHHhH
Q 045485 45 GAFTPTCSQKHLPGFVEKS 63 (164)
Q Consensus 45 ~~~cp~C~~~~l~~l~~~~ 63 (164)
+.|||.|+.. .+...+..
T Consensus 269 t~~CP~CQ~~-~~~~~~~~ 286 (310)
T 3twl_A 269 TAYVPELQKL-YGKDAEKA 286 (310)
T ss_dssp --ECTTTCCC-CHHHHHHH
T ss_pred cEECCCCcCC-CCCCcchh
Confidence 4569999986 55544443
No 408
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=26.02 E-value=95 Score=24.48 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=23.1
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHH
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELK 67 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~ 67 (164)
|.+++... |.+..|..||+|..- ...+++..+--.
T Consensus 50 lr~LLP~~---ieli~GPGCPVCVtp-~~~ID~ai~LA~ 84 (372)
T 2z1d_A 50 IRSLLPEN---VKVVSGPGCPVCITP-VEDIVAMQLIMR 84 (372)
T ss_dssp HHHHSCTT---EEEEECCCCTTTTSC-HHHHHHHHHHHH
T ss_pred HHhhCCCC---cEEecCCCCccEECc-HHHHHHHHHHHh
Confidence 34444444 455568899999986 888877765433
No 409
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=26.02 E-value=1.2e+02 Score=23.75 Aligned_cols=43 Identities=16% Similarity=0.020 Sum_probs=35.0
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceE
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVL 99 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~ 99 (164)
.|.+.++.+.++++|+.+.. +|..+.......++.+|+...|.
T Consensus 217 ~pGv~elL~~Lk~~Gi~laI-vTn~~~~~~~~~L~~lgL~~~Fd 259 (384)
T 1qyi_A 217 VDEVKVLLNDLKGAGFELGI-ATGRPYTETVVPFENLGLLPYFE 259 (384)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHHTCGGGSC
T ss_pred CcCHHHHHHHHHhCCCEEEE-EeCCcHHHHHHHHHHcCChHhcC
Confidence 78999999999999998555 88888888888889898863454
No 410
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.76 E-value=85 Score=23.42 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=24.5
Q ss_pred HhHHHHHhC-CCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 61 EKSAELKSK-GVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 61 ~~~~~~~~~-~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+.+..+.+. |+..| ..|.|+.+.+|++..++.
T Consensus 245 ~~~~~l~~~~Gvd~I---~TD~P~~l~~yL~~~~~~ 277 (278)
T 3i10_A 245 KSYGYLIEQLGARIL---QTDQPAYLLDYLRKKGWH 277 (278)
T ss_dssp HHHHHHHHTTCEEEE---EESCHHHHHHHHHHHTSC
T ss_pred HHHHHHHhcCCCCEE---EeCCHHHHHHHHhhcccC
Confidence 446777778 87644 489999999999988764
No 411
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=25.48 E-value=53 Score=21.71 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=14.1
Q ss_pred EEEEEecCCcEEEEEee
Q 045485 131 RYALLAENGVVKVLNLE 147 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~~ 147 (164)
+.+++|++|+|++....
T Consensus 34 GiivlD~dg~I~~~N~~ 50 (129)
T 1mzu_A 34 GAIQVDGSGVIHRYNRT 50 (129)
T ss_dssp EEEEEETTCBEEEECHH
T ss_pred eEEEECCCCeEEEEHHH
Confidence 58999999999887643
No 412
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=25.31 E-value=1.1e+02 Score=20.35 Aligned_cols=38 Identities=8% Similarity=0.129 Sum_probs=29.2
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|.+.++.+.++++| .+ +++|..+.......++.+++.
T Consensus 88 ~~~~~~~l~~l~~~g-~~-~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 88 RPEVLALARDLGQRY-RM-YSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CHHHHHHHHHHTTTS-EE-EEEECCCHHHHHHHHHHHTGG
T ss_pred CccHHHHHHHHHHcC-CE-EEEeCCcHHHHHHHHHhCCHH
Confidence 577888888888888 54 448888877778888888764
No 413
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=25.27 E-value=1.1e+02 Score=19.68 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=33.8
Q ss_pred cEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 72 DIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 72 ~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
..++ +..++.++..+.+++.|.+ + ...+... .+ | +..++.|++|.+..+...
T Consensus 67 ~hl~-f~V~d~d~~~~~l~~~G~~--v--~~~p~~~---~~-------------G---~~~~~~DPdG~~iel~~~ 118 (144)
T 3r6a_A 67 TQAT-FLVDSLDKFKTFLEENGAE--I--IRGPSKV---PT-------------G---RNMTVRHSDGSVIEYVEH 118 (144)
T ss_dssp CCEE-EEESCHHHHHHHHHHTTCE--E--EEEEEEE---TT-------------E---EEEEEECTTSCEEEEEEE
T ss_pred eEEE-EEeCCHHHHHHHHHHcCCE--E--ecCCccC---CC-------------c---eEEEEECCCCCEEEEEEc
Confidence 3466 6778888888888888866 3 2221100 11 2 448999999999877664
No 414
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=25.01 E-value=98 Score=22.08 Aligned_cols=16 Identities=13% Similarity=0.196 Sum_probs=8.8
Q ss_pred EEEEEec---CCcEEEEEe
Q 045485 131 RYALLAE---NGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~---~G~I~~~~~ 146 (164)
+.+.+|+ .|-|.....
T Consensus 135 Tvh~v~~~~D~G~Ii~Q~~ 153 (212)
T 1jkx_A 135 SVHFVTDELDGGPVILQAK 153 (212)
T ss_dssp EEEECCSSTTCSCEEEEEE
T ss_pred EEEEEcccccCCCEEEEEE
Confidence 3556664 366655543
No 415
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=24.75 E-value=51 Score=19.80 Aligned_cols=15 Identities=7% Similarity=-0.002 Sum_probs=12.8
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|.+|+|+++.
T Consensus 17 ~i~~~d~~g~i~~~N 31 (120)
T 2gj3_A 17 AISITDLKANILYAN 31 (120)
T ss_dssp EEEEECTTCBEEEEC
T ss_pred eEEEECCCCCEEeeh
Confidence 478999999998865
No 416
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=24.74 E-value=1.2e+02 Score=20.68 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=25.2
Q ss_pred HHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 63 SAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 63 ~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.+.++++|+.+.. +|.++.......+++.|+.
T Consensus 55 l~~L~~~g~~~~i-vTn~~~~~~~~~l~~lgl~ 86 (191)
T 3n1u_A 55 LKLLMAAGIQVAI-ITTAQNAVVDHRMEQLGIT 86 (191)
T ss_dssp HHHHHHTTCEEEE-ECSCCSHHHHHHHHHHTCC
T ss_pred HHHHHHCCCeEEE-EeCcChHHHHHHHHHcCCc
Confidence 5677788887665 8888878888888888876
No 417
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=24.67 E-value=40 Score=26.01 Aligned_cols=10 Identities=0% Similarity=0.082 Sum_probs=6.7
Q ss_pred eEEEEEecCC
Q 045485 130 RRYALLAENG 139 (164)
Q Consensus 130 p~~~lid~~G 139 (164)
|+..+++...
T Consensus 310 P~~~i~~~~~ 319 (367)
T 3us3_A 310 PQIGVVNVTD 319 (367)
T ss_dssp CEEEEEETTT
T ss_pred CeEEEEeccc
Confidence 5688888543
No 418
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=24.61 E-value=1.3e+02 Score=18.64 Aligned_cols=53 Identities=15% Similarity=0.089 Sum_probs=32.9
Q ss_pred HHhHHHHHhCCCcEEEEEecCCHH----HHHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 60 VEKSAELKSKGVDIVACISVNDAF----VMKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 60 ~~~~~~~~~~~v~vi~~is~d~~~----~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
++....++...+.++. ++.|-+. .+..+.+.++++ +..+.+...++.+..|..
T Consensus 28 ~~v~kai~~gkaklVi-iA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~a~Gk~ 84 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVF-ISNNCPTVRKSEIEYYASLAQIS--IHHFVGSNVELGTACGKY 84 (104)
T ss_dssp HHHHHHHHHTCCCEEE-ECTTSCHHHHHHHHHHHHHHTCE--EEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCceEEE-EeCCCCHHHHHHHHHHHHHcCCc--EEEecCCHHHHHHHhCCc
Confidence 4555666666677776 7777433 334455566665 543346677888888874
No 419
>3ilx_A First ORF in transposon ISC1904; sulfolobus solfataricus P2, structural G PSI-2, protein structure initiative; 2.00A {Sulfolobus solfataricus} PDB: 3lhf_A
Probab=24.61 E-value=1.4e+02 Score=19.62 Aligned_cols=47 Identities=11% Similarity=0.086 Sum_probs=34.4
Q ss_pred hhhHHHhHHHHHhCCCcEEEEE-----ecCCHHHHHHHHHHhCCCCceEEEEeC
Q 045485 56 LPGFVEKSAELKSKGVDIVACI-----SVNDAFVMKAWKENLGINDEVLLLSDG 104 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~i-----s~d~~~~~~~~~~~~~~~~~~~~l~D~ 104 (164)
-|.|+++.+..++..+.+|.|- +.+..+-+..+++.+|.. +.++.++
T Consensus 49 Rp~l~~ll~~~~~g~id~vvv~~ldRL~R~~~~~l~~~l~~~gv~--v~~~~~~ 100 (143)
T 3ilx_A 49 RKGFLKLLRMILNNEVSRVITAYPDRLVRFGFEILEEVCKAHNCE--IVVLNQE 100 (143)
T ss_dssp CHHHHHHHHHHHTTCEEEEEESSHHHHCSSCHHHHHHHHHHTTCE--EEESCSS
T ss_pred cHHHHHHHHHHHhCCCCEEEEEeCCcccccHHHHHHHHHHHcCCE--EEEEeCC
Confidence 7999999999886656666632 345666677788889988 8776654
No 420
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=24.41 E-value=1.1e+02 Score=21.06 Aligned_cols=59 Identities=20% Similarity=0.191 Sum_probs=38.8
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEeC------c----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSDG------N----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D~------~----~~~~~~~gv~ 115 (164)
.|...++.+.++++|+.+.. +|..+.......++..++...| .+.++. + ..+.+.+|+.
T Consensus 96 ~~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~ 166 (241)
T 2hoq_A 96 VPGARKVLIRLKELGYELGI-ITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVK 166 (241)
T ss_dssp CTTHHHHHHHHHHHTCEEEE-EECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHCCCEEEE-EECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCC
Confidence 46677777888888887655 7877777777888888875333 333331 1 3456777875
No 421
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=24.32 E-value=1.5e+02 Score=19.69 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=26.6
Q ss_pred hhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 57 PGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 57 ~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+...++.+.+++.|+.++. ++..........++..++.
T Consensus 97 ~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~~~~ 134 (226)
T 1te2_A 97 PGVREAVALCKEQGLLVGL-ASASPLHMLEKVLTMFDLR 134 (226)
T ss_dssp TTHHHHHHHHHHTTCEEEE-EESSCHHHHHHHHHHTTCG
T ss_pred ccHHHHHHHHHHCCCcEEE-EeCCcHHHHHHHHHhcCcH
Confidence 4455566677777887655 7777777777777777765
No 422
>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}
Probab=24.29 E-value=1.4e+02 Score=18.86 Aligned_cols=62 Identities=11% Similarity=0.123 Sum_probs=36.5
Q ss_pred CCCcEEEEEecCCHHHHHHHHHH-hCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 69 KGVDIVACISVNDAFVMKAWKEN-LGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 69 ~~v~vi~~is~d~~~~~~~~~~~-~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
.++. ++ +..++.++..+.+++ .|.+ +. ..+.. ..||.... ....+..++.||+|.+..+...
T Consensus 73 ~g~~-~~-~~v~dvd~~~~~l~~~~G~~--~~--~~~~~---~~~g~~~~--------~~~~~~~~~~DPdG~~iel~~~ 135 (145)
T 2rk9_A 73 SGVN-FQ-WDVIDIEPLYQRVNESAADS--IY--LALES---KSYQCGDS--------IATQKQFMVQTPDGYLFRFCQD 135 (145)
T ss_dssp TTEE-EE-EECSCHHHHHHHHHHHHGGG--EE--EEEEE---EEC-------------CCEEEEEEEECTTCCEEEEEEC
T ss_pred CceE-EE-EEECCHHHHHHHHHhhCCCe--Ee--cCccc---cccccCCC--------CCcceEEEEECCCCCEEEEEEc
Confidence 3554 66 788898888888888 8876 42 22211 12332000 0111458899999998777653
No 423
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=24.28 E-value=1.3e+02 Score=22.48 Aligned_cols=25 Identities=4% Similarity=0.013 Sum_probs=20.8
Q ss_pred CCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 70 GVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 70 ~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
|+.++. ++....+++..++++++++
T Consensus 70 g~~v~~-atGr~~~~l~~~~~~~gld 94 (335)
T 3n28_A 70 RYEVAL-MDGELTSEHETILKALELD 94 (335)
T ss_dssp TEEEEE-ESSCCCHHHHHHHHHHTCE
T ss_pred cceEEE-ecCCchHHHHHHHHHcCCC
Confidence 676666 7888888999999999987
No 424
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.19 E-value=1.2e+02 Score=21.62 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=8.9
Q ss_pred EEEEEec---CCcEEEEEe
Q 045485 131 RYALLAE---NGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~---~G~I~~~~~ 146 (164)
+...+|+ .|-|.....
T Consensus 136 Tvh~v~~~~D~G~Ii~q~~ 154 (216)
T 2ywr_A 136 TVHIVDESVDAGPVIVQAV 154 (216)
T ss_dssp EEEECCSSSSCSCEEEEEE
T ss_pred EEEEEcccCCCCCEEEEEE
Confidence 3556664 366665544
No 425
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=24.03 E-value=1.8e+02 Score=24.09 Aligned_cols=47 Identities=9% Similarity=0.073 Sum_probs=35.8
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEe-------cCCHHHHHHHHHHhCCCCceEEEEeCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACIS-------VNDAFVMKAWKENLGINDEVLLLSDGN 105 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is-------~d~~~~~~~~~~~~~~~~~~~~l~D~~ 105 (164)
+..|+.+.++++++|..|+- +. .+..+.+.+.+++++.. -..+.+|.
T Consensus 66 ~saMr~fa~~L~~~G~~v~y-~~~~~~~~~g~~~~~L~~l~~~~~~~--~v~~~~P~ 119 (522)
T 3zxs_A 66 LAAMRKFARRLQERGFRVAY-SRLDDPDTGPSIGAELLRRAAETGAR--EAVATRPG 119 (522)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-ECTTCTTCCSSHHHHHHHHHHHHTCC--CEEEECCS
T ss_pred HHHHHHHHHHHHhCCCeEEE-EeccCccccCCHHHHHHHHHHHcCCC--EEEEeCcc
Confidence 56678888999999999888 66 23467788888999887 55556764
No 426
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=23.88 E-value=58 Score=19.89 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=12.5
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|++|+|++..
T Consensus 28 ~i~~~d~~g~i~~~N 42 (130)
T 1d06_A 28 ATVVSATDGTIVSFN 42 (130)
T ss_dssp EEEEEETTSBEEEEC
T ss_pred eEEEECCCCeEEEEc
Confidence 478999999998755
No 427
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=23.82 E-value=1.9e+02 Score=23.45 Aligned_cols=43 Identities=9% Similarity=0.186 Sum_probs=33.8
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEe-cCCHHHHHHHHHHhCCCCceEEE
Q 045485 56 LPGFVEKSAELKSKGVDIVACIS-VNDAFVMKAWKENLGINDEVLLL 101 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is-~d~~~~~~~~~~~~~~~~~~~~l 101 (164)
+..|..+.++++++|..++. .. .+..+.+.+++++++.. -.+.
T Consensus 64 ~~sL~~L~~~L~~~G~~L~v-~~~g~~~~~l~~l~~~~~~~--~V~~ 107 (509)
T 1u3d_A 64 KNSLAQLDSSLRSLGTCLIT-KRSTDSVASLLDVVKSTGAS--QIFF 107 (509)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-EECSCHHHHHHHHHHHHTCC--EEEE
T ss_pred HHHHHHHHHHHHHCCCeEEE-EeCCCHHHHHHHHHHHcCCC--EEEE
Confidence 45678888899999999777 65 46668889999999987 5444
No 428
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=23.76 E-value=1.2e+02 Score=20.52 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=26.2
Q ss_pred hHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 62 KSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 62 ~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..+.++++|+.+.. +|.++...+...+++.|+.
T Consensus 54 ~l~~L~~~g~~~~i-~T~~~~~~~~~~~~~lgl~ 86 (189)
T 3mn1_A 54 GIKMLIASGVTTAI-ISGRKTAIVERRAKSLGIE 86 (189)
T ss_dssp HHHHHHHTTCEEEE-ECSSCCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCEEEE-EECcChHHHHHHHHHcCCH
Confidence 56777888987655 8888878888888888886
No 429
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=23.68 E-value=1.6e+02 Score=19.77 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=38.1
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCC---HHHHHHHHHHhCCCCce--EEEEe------Cc----chHHHHhCCcc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVND---AFVMKAWKENLGINDEV--LLLSD------GN----GVFTKAIGCEL 116 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~---~~~~~~~~~~~~~~~~~--~~l~D------~~----~~~~~~~gv~~ 116 (164)
.+...++.+.+++.|+.+.. +|... .......++..++...| .+.++ |+ ..+.+.+|+..
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 175 (235)
T 2om6_A 101 LEGTKEALQFVKERGLKTAV-IGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKP 175 (235)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCG
T ss_pred CccHHHHHHHHHHCCCEEEE-EcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCc
Confidence 35666777778888887655 77777 77777788887765323 33332 22 23567788753
No 430
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=23.62 E-value=2e+02 Score=21.46 Aligned_cols=72 Identities=14% Similarity=0.161 Sum_probs=44.2
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+.+++||.+|+. ..+... ...+.++. ++ . .+++| -+..+.....+.++..+-+ |.+++..+..
T Consensus 128 va~a-~~lPiilYn~P~~--tg~~l~-~~~~~~La-~~--p--nivgiKdssgd~~~~~~~~~~~~~~--f~v~~G~d~~ 196 (297)
T 3flu_A 128 IAEA-TSIPMIIYNVPGR--TVVSMT-NDTILRLA-EI--P--NIVGVKEASGNIGSNIELINRAPEG--FVVLSGDDHT 196 (297)
T ss_dssp HHHH-CCSCEEEEECHHH--HSSCCC-HHHHHHHT-TS--T--TEEEEEECSCCHHHHHHHHHHSCTT--CEEEECCGGG
T ss_pred HHHh-CCCCEEEEECCch--hccCCC-HHHHHHHH-cC--C--CEEEEEeCCCCHHHHHHHHHhcCCC--eEEEECcHHH
Confidence 3444 3678999998752 244444 44444443 22 3 35662 2445677788888777766 9999987765
Q ss_pred HHHH
Q 045485 108 FTKA 111 (164)
Q Consensus 108 ~~~~ 111 (164)
+...
T Consensus 197 ~l~~ 200 (297)
T 3flu_A 197 ALPF 200 (297)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 431
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=23.54 E-value=1.1e+02 Score=21.84 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=26.7
Q ss_pred HHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 60 VEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 60 ~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.+..++++++|+.++. +|.-+...+..+++..+++
T Consensus 23 ~~~l~~l~~~g~~~~i-~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 23 KPIIEELKDMGFEIIF-NSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp HHHHHHHHHTTEEEEE-BCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHHcCCC
Confidence 3445667778988666 7888888888888888876
No 432
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=23.43 E-value=19 Score=27.38 Aligned_cols=9 Identities=11% Similarity=0.324 Sum_probs=7.2
Q ss_pred CCCcCCCcC
Q 045485 46 AFTPTCSQK 54 (164)
Q Consensus 46 ~~cp~C~~~ 54 (164)
.|||.|+..
T Consensus 280 ~~CP~CQ~~ 288 (295)
T 3vk8_A 280 YWAPAIQKL 288 (295)
T ss_dssp EECTTTCBC
T ss_pred EECCCCCCC
Confidence 469999975
No 433
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=23.40 E-value=1.9e+02 Score=20.06 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=30.6
Q ss_pred hhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 57 PGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 57 ~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+...+..++++++|+.++. +|.-+......+.+..+++
T Consensus 23 ~~~~~al~~l~~~G~~v~i-~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 23 EKALEAIRRAESLGIPIML-VTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp HHHHHHHHHHHHTTCCEEE-ECSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEE-EcCCChhHHHHHHHHcCCC
Confidence 5556667778889999877 8888888888888888876
No 434
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=23.08 E-value=1.6e+02 Score=19.16 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=32.6
Q ss_pred EEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 74 VACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 74 i~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
++ +..++.+++.+.++..|.. +. ..+.. ..+|. +..++.|++|.+..+...
T Consensus 94 l~-~~v~dvd~~~~~l~~~G~~--~~--~~~~~---~~~g~---------------~~~~~~DPdG~~iel~~~ 144 (164)
T 3m2o_A 94 LN-FEVDDPDREYARLQQAGLP--IL--LTLRD---EDFGQ---------------RHFITADPNGVLIDIIKP 144 (164)
T ss_dssp EE-EECSCHHHHHHHHHHTTCC--CS--EEEEE---C---C---------------EEEEEECTTCCEEEEEC-
T ss_pred EE-EEECCHHHHHHHHHHCCCc--ee--cCccc---cCCCc---------------EEEEEECCCCCEEEEEEE
Confidence 66 7788888888888888876 31 11110 12222 447899999999877654
No 435
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=23.07 E-value=2.3e+02 Score=21.40 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=44.7
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+.+++||.+|+. ..+... ...+.++. ++ .+ |++| -+..+.....+.++..+-+ |.+++..+..
T Consensus 144 va~a-~~lPiilYn~P~~--tg~~l~-~~~~~~La-~~--pn--IvgiKdssgd~~~~~~~~~~~~~~--f~v~~G~d~~ 212 (314)
T 3qze_A 144 IAEA-VAIPQILYNVPGR--TSCDML-PETVERLS-KV--PN--IIGIKEATGDLQRAKEVIERVGKD--FLVYSGDDAT 212 (314)
T ss_dssp HHHH-SCSCEEEEECHHH--HSCCCC-HHHHHHHH-TS--TT--EEEEEECSCCHHHHHHHHHHSCTT--SEEEESCGGG
T ss_pred HHHh-cCCCEEEEeCccc--cCCCCC-HHHHHHHh-cC--CC--EEEEEcCCCCHHHHHHHHHHcCCC--eEEEecChHH
Confidence 3444 3678999998752 234444 45555554 22 33 5662 2445677788888777766 9999988765
Q ss_pred HHHH
Q 045485 108 FTKA 111 (164)
Q Consensus 108 ~~~~ 111 (164)
+...
T Consensus 213 ~l~~ 216 (314)
T 3qze_A 213 AVEL 216 (314)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 436
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=23.06 E-value=1.1e+02 Score=21.73 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=8.8
Q ss_pred EEEEEec---CCcEEEEEe
Q 045485 131 RYALLAE---NGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~---~G~I~~~~~ 146 (164)
+...+|+ .|-|.....
T Consensus 138 Tvh~v~~~~D~G~Ii~Q~~ 156 (212)
T 3av3_A 138 TVHYVDEGMDTGPVIAQRV 156 (212)
T ss_dssp EEEECCSSSSCSCEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEE
Confidence 3556664 366655544
No 437
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=23.04 E-value=57 Score=19.68 Aligned_cols=15 Identities=13% Similarity=0.142 Sum_probs=12.3
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
+.+++|++|+|+++.
T Consensus 23 ~i~~~d~~g~i~~vN 37 (117)
T 2r78_A 23 GIFIMDAEGHYLDVN 37 (117)
T ss_dssp EEEEECTTSBEEEEC
T ss_pred eEEEECCCCCEEEec
Confidence 378999999997754
No 438
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=22.97 E-value=66 Score=18.39 Aligned_cols=15 Identities=7% Similarity=0.040 Sum_probs=12.5
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
..+++|++|+|++..
T Consensus 15 ~i~~~d~~g~i~~~N 29 (114)
T 3luq_A 15 ALAMFDREMRYLAVS 29 (114)
T ss_dssp EEEEEETTCBEEEEC
T ss_pred eEEEEcCCcEEEEEC
Confidence 378999999998765
No 439
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=22.97 E-value=1.7e+02 Score=22.05 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=41.0
Q ss_pred CCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCC---CCceEEEEeCcchHHH
Q 045485 35 NKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGI---NDEVLLLSDGNGVFTK 110 (164)
Q Consensus 35 g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~---~~~~~~l~D~~~~~~~ 110 (164)
+-+++||.+|+ ...+... ...+.++.+++ .+ |++| -+..+.....+.++..+- + |.+++..+..+..
T Consensus 138 ~lPiilYn~P~--~tg~~l~-~~~~~~La~~~--pn--IvgiKdssgd~~~~~~~~~~~~~~~~~--f~v~~G~d~~~l~ 208 (306)
T 1o5k_A 138 DLGIVVYNVPG--RTGVNVL-PETAARIAADL--KN--VVGIXEANPDIDQIDRTVSLTKQARSD--FMVWSGNDDRTFY 208 (306)
T ss_dssp SSCEEEEECHH--HHSCCCC-HHHHHHHHHHC--TT--EEEEEECCCCHHHHHHHHHHHHHHCTT--CEEEESSGGGHHH
T ss_pred CCCEEEEeCcc--ccCcCCC-HHHHHHHHHhC--CC--EEEEeCCCCCHHHHHHHHHhcCCCCCc--EEEEECcHHHHHH
Confidence 56899999875 3344554 55566665333 34 5662 244556777777765543 5 8899877655543
No 440
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.96 E-value=1.5e+02 Score=18.60 Aligned_cols=56 Identities=20% Similarity=0.175 Sum_probs=35.3
Q ss_pred hhhHHHhHHHHH-hCCCcEEEEEecCC--HHHHHHHHHHhCCCCceEEEEeCcchHHHHh
Q 045485 56 LPGFVEKSAELK-SKGVDIVACISVND--AFVMKAWKENLGINDEVLLLSDGNGVFTKAI 112 (164)
Q Consensus 56 l~~l~~~~~~~~-~~~v~vi~~is~d~--~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 112 (164)
...+.+-..++. +++..-|.+||.|. ..++.+.+.+.|+. -|.++.|.+..--..|
T Consensus 35 sdelkkemkklaeeknfekiliisndkqllkemlelisklgyk-vflllqdqdeneleef 93 (134)
T 2lci_A 35 SDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYK-VFLLLQDQDENELEEF 93 (134)
T ss_dssp HHHHHHHHHHHHHCCSCCCEEEEESCHHHHHHHHHHHHHHTCC-EEEEEECSCHHHHHHH
T ss_pred hHHHHHHHHHHHhhcCcceEEEEcCcHHHHHHHHHHHHHhCce-eEEEeecCchhHHHHH
Confidence 455555555554 56777777677764 34556677788886 5788888764433333
No 441
>4g6v_A Adhesin/hemolysin; tRNAse, toxin, immunity; 2.64A {Burkholderia pseudomallei 1026A}
Probab=22.68 E-value=85 Score=21.93 Aligned_cols=15 Identities=7% Similarity=0.282 Sum_probs=13.3
Q ss_pred EEEEecCCcEEEEEe
Q 045485 132 YALLAENGVVKVLNL 146 (164)
Q Consensus 132 ~~lid~~G~I~~~~~ 146 (164)
.+||+++|+|.+++.
T Consensus 159 v~II~K~g~i~~i~~ 173 (176)
T 4g6v_A 159 VIVIDKLGNITIIKP 173 (176)
T ss_dssp EEEECTTCCEEEECC
T ss_pred eEEEecCCcEEEecc
Confidence 899999999998764
No 442
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=22.66 E-value=1.4e+02 Score=18.39 Aligned_cols=17 Identities=12% Similarity=0.233 Sum_probs=13.4
Q ss_pred eEEEEEecCCcEEEEEe
Q 045485 130 RRYALLAENGVVKVLNL 146 (164)
Q Consensus 130 p~~~lid~~G~I~~~~~ 146 (164)
+..++.||+|....+..
T Consensus 114 ~~~~~~DPdGn~iel~~ 130 (132)
T 3sk2_A 114 RTFLISDPDGHIIRVCP 130 (132)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 34899999999877654
No 443
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=22.56 E-value=80 Score=21.40 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=40.9
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCc--eEEEEeCc----------chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDE--VLLLSDGN----------GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~--~~~l~D~~----------~~~~~~~gv~ 115 (164)
.+.+.++.+.++++|+.+.. ++..........++..++... ..+.+|.. ..+.+.+|+.
T Consensus 88 ~~~~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~ 158 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGFHLVV-ATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK 158 (226)
T ss_dssp CTTHHHHHHHHHHHTCEEEE-EEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHHCCCeEEE-EeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC
Confidence 56777888888888887665 777777778888888887532 34444421 3467778875
No 444
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=22.48 E-value=1.3e+02 Score=22.52 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=31.6
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.+++.|+.+.. +|.+........++++|+.
T Consensus 180 ~pg~~~~l~~L~~~g~~~~i-vS~~~~~~~~~~~~~lgl~ 218 (335)
T 3n28_A 180 MPELPELVATLHAFGWKVAI-ASGGFTYFSDYLKEQLSLD 218 (335)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHHTCS
T ss_pred CcCHHHHHHHHHHCCCEEEE-EeCCcHHHHHHHHHHcCCC
Confidence 46667778888889998666 8888888888888999986
No 445
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=22.27 E-value=1.2e+02 Score=20.58 Aligned_cols=42 Identities=21% Similarity=0.085 Sum_probs=30.3
Q ss_pred hhhHHHhHHHHHhC-CCcEEEEEecCCHHHHHHHHHHhCCCCce
Q 045485 56 LPGFVEKSAELKSK-GVDIVACISVNDAFVMKAWKENLGINDEV 98 (164)
Q Consensus 56 l~~l~~~~~~~~~~-~v~vi~~is~d~~~~~~~~~~~~~~~~~~ 98 (164)
.+...++.+.++++ |+.+.. ++..........++..++...|
T Consensus 95 ~~~~~~~l~~l~~~~g~~~~i-~t~~~~~~~~~~l~~~~l~~~f 137 (234)
T 2hcf_A 95 LEGVRELLDALSSRSDVLLGL-LTGNFEASGRHKLKLPGIDHYF 137 (234)
T ss_dssp CTTHHHHHHHHHTCTTEEEEE-ECSSCHHHHHHHHHTTTCSTTC
T ss_pred CCCHHHHHHHHHhCCCceEEE-EcCCcHHHHHHHHHHCCchhhc
Confidence 46677777888887 877554 7777777777888888875334
No 446
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=22.23 E-value=97 Score=22.66 Aligned_cols=39 Identities=33% Similarity=0.296 Sum_probs=29.8
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCC---HHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVND---AFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~---~~~~~~~~~~~~~~ 95 (164)
.|...++.+.++++|+.++. +|..+ .....+.++..|+.
T Consensus 103 ~pg~~e~L~~L~~~Gi~i~i-aTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 103 LPGSIDFLKYTESKGVDIYY-ISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEGGGHHHHHHHHHHHTCS
T ss_pred CccHHHHHHHHHHCCCEEEE-EcCCchhHHHHHHHHHHHcCCC
Confidence 57778888899999998666 66654 55667778888876
No 447
>3umv_A Deoxyribodipyrimidine photo-lyase; CPD cyclobutane pyrimidine dimers, UV damaged DNA, DNA repai flavoprotein; HET: FAD; 1.71A {Oryza sativa japonica group}
Probab=22.17 E-value=1.8e+02 Score=23.70 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=31.6
Q ss_pred hhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 57 PGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 57 ~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..|+++.++++++|..++. ...++.+. .+++++++..
T Consensus 95 ~sL~dL~~~L~~lG~~L~v-~~G~p~~v-~~L~~~~~a~ 131 (506)
T 3umv_A 95 RGLRRLAADAAARHLPFFL-FTGGPAEI-PALVQRLGAS 131 (506)
T ss_dssp HHHHHHHHHHHHTTCCEEE-ESSCTTHH-HHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCceEE-EecChHHH-HHHHHhcCCC
Confidence 4578888999999999877 78888888 9999999987
No 448
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=22.10 E-value=2.5e+02 Score=21.02 Aligned_cols=72 Identities=22% Similarity=0.308 Sum_probs=44.0
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+-+++||.+|+ ...+... ...+.++. ++ .+ |++| -+..+.....++++..+-+ |.+++..+..
T Consensus 133 va~a-~~lPiilYn~P~--~tg~~l~-~~~~~~La-~~--pn--IvgiKdssgd~~~~~~~~~~~~~~--f~v~~G~d~~ 201 (301)
T 1xky_A 133 IAES-TPLPVMLYNVPG--RSIVQIS-VDTVVRLS-EI--EN--IVAIKDAGGDVLTMTEIIEKTADD--FAVYSGDDGL 201 (301)
T ss_dssp HHHT-CSSCEEEEECHH--HHSSCCC-HHHHHHHH-TS--TT--EEEEEECSSCHHHHHHHHHHSCTT--CEEEESSGGG
T ss_pred HHHh-cCCCEEEEeCcc--ccCCCCC-HHHHHHHH-cC--CC--EEEEEcCCCCHHHHHHHHHhcCCC--eEEEECcHHH
Confidence 3444 357899999875 3344444 45555554 22 33 5662 2445677777888776655 9999987755
Q ss_pred HHHH
Q 045485 108 FTKA 111 (164)
Q Consensus 108 ~~~~ 111 (164)
+...
T Consensus 202 ~l~~ 205 (301)
T 1xky_A 202 TLPA 205 (301)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 449
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=22.00 E-value=72 Score=19.71 Aligned_cols=16 Identities=13% Similarity=0.092 Sum_probs=13.9
Q ss_pred EEEEecCCcEEEEEee
Q 045485 132 YALLAENGVVKVLNLE 147 (164)
Q Consensus 132 ~~lid~~G~I~~~~~~ 147 (164)
.|.||++|+|....+.
T Consensus 45 ~f~I~~~G~v~~~~v~ 60 (106)
T 2k9k_A 45 SFTIDTTGKAVDINVV 60 (106)
T ss_dssp EEEEETTTEEEEEEEE
T ss_pred EEEECCCCcEEEEEEE
Confidence 7999999999887774
No 450
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=21.75 E-value=1.1e+02 Score=21.30 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=37.8
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCce--EEEEeC------c----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEV--LLLSDG------N----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~--~~l~D~------~----~~~~~~~gv~ 115 (164)
.|...++.+.++++|+.+.. ++..+.+.+...++..++. .| .+.++. + ..+.+.+|+.
T Consensus 112 ~~g~~~~l~~l~~~g~~~~i-~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~ 181 (240)
T 2hi0_A 112 FPGILDLMKNLRQKGVKLAV-VSNKPNEAVQVLVEELFPG-SFDFALGEKSGIRRKPAPDMTSECVKVLGVP 181 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHHHHHHHHHcCCC
Confidence 46677777888888887554 7777767777788887764 33 333331 1 2456777875
No 451
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=21.56 E-value=1.8e+02 Score=19.02 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=27.4
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCH---------------HHHHHHHHHhC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDA---------------FVMKAWKENLG 93 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~---------------~~~~~~~~~~~ 93 (164)
.|...+..++++++|+.+.. +|..+. +.+...++..|
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i-~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 80 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVL-ATNQSGLARGLFDTATLNAIHDKMHRALAQMG 80 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHCCCEEEE-EECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence 56777888889999988665 776654 45566777888
No 452
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=21.56 E-value=1.4e+02 Score=18.26 Aligned_cols=64 Identities=14% Similarity=-0.009 Sum_probs=40.4
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcc
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNG 106 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~ 106 (164)
.++|.+= ....+-...+..|..+++.++++|..+.. .... ..+++.++..|+...|++..+.+.
T Consensus 44 ~vvlDls---~v~~iDssgl~~L~~~~~~~~~~g~~l~l-~~~~--~~v~~~l~~~gl~~~~~i~~~~~~ 107 (117)
T 4hyl_A 44 KMILDLR---EVSYMSSAGLRVLLSLYRHTSNQQGALVL-VGVS--EEIRDTMEITGFWNFFTACASMDE 107 (117)
T ss_dssp EEEEEEE---EEEEECHHHHHHHHHHHHHHHHTTCEEEE-ECCC--HHHHHHHHHHTCGGGCEEESCHHH
T ss_pred eEEEECC---CCcEEcHHHHHHHHHHHHHHHHcCCEEEE-EeCC--HHHHHHHHHhCccceeeecCCHHH
Confidence 3444443 24555444578888888888888987665 3332 355677777887645777655433
No 453
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=21.54 E-value=1.5e+02 Score=18.20 Aligned_cols=18 Identities=6% Similarity=0.113 Sum_probs=14.4
Q ss_pred eEEEEEecCCcEEEEEee
Q 045485 130 RRYALLAENGVVKVLNLE 147 (164)
Q Consensus 130 p~~~lid~~G~I~~~~~~ 147 (164)
+..++.||+|.++.+...
T Consensus 111 ~~~~~~DPdGn~iel~~~ 128 (135)
T 3rri_A 111 ETFFLIDPSNNLLEFKYY 128 (135)
T ss_dssp EEEEEECTTCCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEE
Confidence 458999999999877664
No 454
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=21.47 E-value=1.3e+02 Score=24.27 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEE----ecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACI----SVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~i----s~d~~~~~~~~~~~~~~~ 95 (164)
+..|+.+.++++++|..++. . ..+..+.+.+++++++..
T Consensus 55 ~~sL~~L~~~L~~~G~~L~v-~~~~~~g~~~~~l~~l~~~~~~~ 97 (471)
T 1dnp_A 55 NAQLNGLQIALAEKGIPLLF-REVDDFVASVEIVKQVCAENSVT 97 (471)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-EECSSHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHCCCeEEE-EEccCCCCHHHHHHHHHHHcCCC
Confidence 45678888899999999777 6 456678889999999887
No 455
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=21.44 E-value=1.3e+02 Score=23.31 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.|...++.+.+++.|+.+.. +|..........++++|+.
T Consensus 258 ~pg~~e~l~~Lk~~G~~~~i-vS~~~~~~~~~~~~~lgl~ 296 (415)
T 3p96_A 258 MPGARTTLRTLRRLGYACGV-VSGGFRRIIEPLAEELMLD 296 (415)
T ss_dssp CTTHHHHHHHHHHTTCEEEE-EEEEEHHHHHHHHHHTTCS
T ss_pred CccHHHHHHHHHHCCCEEEE-EcCCcHHHHHHHHHHcCcc
Confidence 46677788888889988655 8888888888888889887
No 456
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=21.36 E-value=85 Score=25.27 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=23.0
Q ss_pred CCCCCCCCCeeeeeecCCCceeeeehhhhcC-CCcEEEEE
Q 045485 4 ISVGDKLPDATLSYFDSAGELQTITVSDLTS-NKKAILFA 42 (164)
Q Consensus 4 l~~G~~~P~f~l~~~~~~g~~~~~~l~d~~~-g~~vvl~f 42 (164)
+.+|..+|++.+. ..+| . .++.|+.. ++++||.|
T Consensus 395 ~~~G~r~p~~~l~--~~~~-~--~~l~d~~~~~~~~ll~~ 429 (499)
T 2qa2_A 395 PLLGMRMPHQELV--RAHG-K--TSTTELLHPARGVLLDI 429 (499)
T ss_dssp TTTTSBCCCCEEE--CSSS-E--EETTGGGTTCSEEEEEC
T ss_pred CCCCCCCCCCeee--cCCC-c--eeHHHHhcCCeEEEEEe
Confidence 4579999999853 3344 3 67888863 46666655
No 457
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=21.32 E-value=1.5e+02 Score=20.47 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=34.0
Q ss_pred HHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCCCceEEEE-eCc----chHHHHhCCc
Q 045485 63 SAELKSKGVDIVACISVNDAFVMKAWKENLGINDEVLLLS-DGN----GVFTKAIGCE 115 (164)
Q Consensus 63 ~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~-D~~----~~~~~~~gv~ 115 (164)
.+.++++|+.+.. +|.++.......+++.|+. ..+.. -++ ..+.+.+|+.
T Consensus 61 l~~L~~~G~~~~i-vT~~~~~~~~~~l~~lgi~--~~~~~~k~k~~~~~~~~~~~~~~ 115 (195)
T 3n07_A 61 VKALMNAGIEIAI-ITGRRSQIVENRMKALGIS--LIYQGQDDKVQAYYDICQKLAIA 115 (195)
T ss_dssp HHHHHHTTCEEEE-ECSSCCHHHHHHHHHTTCC--EEECSCSSHHHHHHHHHHHHCCC
T ss_pred HHHHHHCCCEEEE-EECcCHHHHHHHHHHcCCc--EEeeCCCCcHHHHHHHHHHhCCC
Confidence 5677888988655 8888888888899999887 32211 122 3456677765
No 458
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=21.32 E-value=63 Score=22.93 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=13.5
Q ss_pred EEEEEecCCcEEEEEe
Q 045485 131 RYALLAENGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~ 146 (164)
+.+++|++|+|+++..
T Consensus 34 ~vii~D~~g~I~~~N~ 49 (233)
T 3vol_A 34 NVMIADNDLNIIYMNR 49 (233)
T ss_dssp EEEEEETTSBEEEECH
T ss_pred cEEEECCCCcEEEecH
Confidence 4899999999988754
No 459
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=21.31 E-value=1.7e+02 Score=18.69 Aligned_cols=25 Identities=8% Similarity=0.049 Sum_probs=12.7
Q ss_pred cEEEEEecCCCCcCCCcCchhhHHHhHHHH
Q 045485 37 KAILFAVPGAFTPTCSQKHLPGFVEKSAEL 66 (164)
Q Consensus 37 ~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~ 66 (164)
.+||-|| .+||..| .+.|.+.++.+
T Consensus 41 v~VVGfF-~~~~~~~----~~~F~~~A~~~ 65 (124)
T 2l4c_A 41 VAVIGFF-QDLEIPA----VPILHSMVQKF 65 (124)
T ss_dssp EEEEEEC-SCTTSTH----HHHHHHHHHHC
T ss_pred CEEEEEE-CCCCChh----HHHHHHHHHhC
Confidence 4444444 6666555 24455555554
No 460
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=21.29 E-value=1.4e+02 Score=25.15 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=28.4
Q ss_pred hhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 57 PGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 57 ~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+...+..+++++.|+.++. ++.|+....+...++.|+.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~-~TGd~~~~a~~ia~~lgi~ 497 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGM-ITGDNWRSAEAISRELNLD 497 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHCCCEEEE-EeCCCHHHHHHHHHHcCCC
Confidence 4445666777778888666 8888888888888888876
No 461
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=21.24 E-value=72 Score=18.71 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=13.1
Q ss_pred EEEEEecCCcEEEEEe
Q 045485 131 RYALLAENGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~~G~I~~~~~ 146 (164)
..+++|.+|+|++...
T Consensus 11 ~i~~~d~~g~i~~~N~ 26 (126)
T 3mjq_A 11 MILIINREGRLLYANT 26 (126)
T ss_dssp EEEEEETTSBEEEECT
T ss_pred eEEEEeCCCcEEEEcH
Confidence 4789999999988653
No 462
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.21 E-value=1.4e+02 Score=21.45 Aligned_cols=16 Identities=13% Similarity=0.167 Sum_probs=9.2
Q ss_pred EEEEEec---CCcEEEEEe
Q 045485 131 RYALLAE---NGVVKVLNL 146 (164)
Q Consensus 131 ~~~lid~---~G~I~~~~~ 146 (164)
+...+|+ .|-|.....
T Consensus 137 Tvh~v~~~~D~G~Ii~Q~~ 155 (211)
T 3p9x_A 137 TIHYVDEGMDTGPIIAQEA 155 (211)
T ss_dssp EEEECCSSSSCSCEEEEEE
T ss_pred EEEEEcCCCCCCCEEEEEE
Confidence 3556665 477765554
No 463
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=21.15 E-value=1.3e+02 Score=24.82 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=31.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
+..|..+.++++++|..++. ...+..+.+.+++++++.+
T Consensus 88 ~~sL~~L~~~L~~~G~~L~v-~~g~~~~~l~~l~~~~~~~ 126 (543)
T 2wq7_A 88 QQTLEDLDNQLRKLNSRLFV-VRGKPAEVFPRIFKSWRVE 126 (543)
T ss_dssp HHHHHHHHHHHHHTTCCCEE-EESCHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHHHcCCC
Confidence 45578888889999998777 7777778888888888876
No 464
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=21.12 E-value=76 Score=18.05 Aligned_cols=15 Identities=13% Similarity=0.109 Sum_probs=12.6
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
..+++|++|+|.+..
T Consensus 19 ~i~~~d~~~~i~~~N 33 (124)
T 3lyx_A 19 AIVVTDLQGFIIDWN 33 (124)
T ss_dssp EEEEEETTCBEEEEC
T ss_pred eEEEECCCCcEeehh
Confidence 478999999998764
No 465
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=21.11 E-value=3.1e+02 Score=21.59 Aligned_cols=59 Identities=19% Similarity=0.239 Sum_probs=40.0
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHh-----CCCCceEEEEe--Cc----chHHHHhCCc
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENL-----GINDEVLLLSD--GN----GVFTKAIGCE 115 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~-----~~~~~~~~l~D--~~----~~~~~~~gv~ 115 (164)
.+.+.++.+.++++|+.+.. +|.++.+.+++.++++ +....+.+... ++ ..+.+++|+.
T Consensus 258 ypgv~e~L~~Lk~~Gi~laI-~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~KPKp~~l~~al~~Lgl~ 327 (387)
T 3nvb_A 258 FTEFQEWVKKLKNRGIIIAV-CSKNNEGKAKEPFERNPEMVLKLDDIAVFVANWENKADNIRTIQRTLNIG 327 (387)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-EEESCHHHHHHHHHHCTTCSSCGGGCSEEEEESSCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHhhccccccCccCccEEEeCCCCcHHHHHHHHHHhCcC
Confidence 46788889999999998544 8999988888888873 32211222222 22 4567888875
No 466
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=21.02 E-value=1.9e+02 Score=20.45 Aligned_cols=42 Identities=14% Similarity=-0.008 Sum_probs=32.9
Q ss_pred hhhHHHhHHHHHhCCC--cEEEEEecCCHHHHHHHHHHhCCCCce
Q 045485 56 LPGFVEKSAELKSKGV--DIVACISVNDAFVMKAWKENLGINDEV 98 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v--~vi~~is~d~~~~~~~~~~~~~~~~~~ 98 (164)
.|.+.++.+.++++|+ .+.. +|..........++..++...|
T Consensus 144 ~p~~~~~L~~L~~~g~~~~l~i-~Tn~~~~~~~~~l~~~gl~~~f 187 (282)
T 3nuq_A 144 DIPLRNMLLRLRQSGKIDKLWL-FTNAYKNHAIRCLRLLGIADLF 187 (282)
T ss_dssp CHHHHHHHHHHHHSSSCSEEEE-ECSSCHHHHHHHHHHHTCTTSC
T ss_pred ChhHHHHHHHHHhCCCCceEEE-EECCChHHHHHHHHhCCccccc
Confidence 6788888999999998 7555 8888878888888888875334
No 467
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=20.94 E-value=1.6e+02 Score=18.28 Aligned_cols=53 Identities=15% Similarity=0.238 Sum_probs=33.0
Q ss_pred HHhHHHHHhCCCcEEEEEecCCHHH----HHHHHHHhCCCCceEEEEeCcchHHHHhCCc
Q 045485 60 VEKSAELKSKGVDIVACISVNDAFV----MKAWKENLGINDEVLLLSDGNGVFTKAIGCE 115 (164)
Q Consensus 60 ~~~~~~~~~~~v~vi~~is~d~~~~----~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 115 (164)
++....++...+.++. ++.|-++. +..+.+.++++ +..+.+...++.+..|..
T Consensus 28 ~~v~kai~~gkaklVi-lA~D~~~~~~~~i~~~c~~~~ip--~~~~~~s~~eLG~A~Gk~ 84 (105)
T 3u5e_c 28 KSTVKSLRQGKSKLII-IAANTPVLRKSELEYYAMLSKTK--VYYFQGGNNELGTAVGKL 84 (105)
T ss_dssp HHHHHHHHTTCCSEEE-ECTTSCHHHHHHHHHHHHHHTCE--EEECSSCHHHHHHHTTCS
T ss_pred HHHHHHHHcCCceEEE-EeCCCCHHHHHHHHHHHHHcCCC--EEEeCCCHHHHHHHhCCc
Confidence 4455566655577666 77775332 34455666666 553446677888888875
No 468
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=20.92 E-value=68 Score=19.16 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=12.3
Q ss_pred EEEEEecCCcEEEEE
Q 045485 131 RYALLAENGVVKVLN 145 (164)
Q Consensus 131 ~~~lid~~G~I~~~~ 145 (164)
..+++|++|+|++..
T Consensus 29 ~i~~~d~~g~i~~~N 43 (126)
T 3bwl_A 29 MIDVLDADGTICEVN 43 (126)
T ss_dssp EEEEECTTCBEEEEC
T ss_pred EEEEEcCCCCEEEEc
Confidence 378999999998765
No 469
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=20.87 E-value=2.8e+02 Score=20.97 Aligned_cols=74 Identities=9% Similarity=0.101 Sum_probs=43.5
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhC-CCCceEEEEeCcc
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLG-INDEVLLLSDGNG 106 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~-~~~~~~~l~D~~~ 106 (164)
+++- .+-+++||.+|+. +..+... ...+.++.+++ .+ |++| -+..+.....++++... -+ |.+++..+.
T Consensus 134 ia~a-~~lPiilYn~P~~-t~g~~l~-~~~~~~La~~~--pn--IvgiKdssgd~~~~~~~~~~~~~~~--f~v~~G~d~ 204 (318)
T 3qfe_A 134 VSCQ-SPLPVVIYNFPGV-CNGIDLD-SDMITTIARKN--PN--VVGVKLTCASVGKITRLAATLPPAA--FSVFGGQSD 204 (318)
T ss_dssp HHHH-CSSCEEEEECCC-----CCCC-HHHHHHHHHHC--TT--EEEEEESSCCHHHHHHHHHHSCGGG--CEEEESCGG
T ss_pred HHhh-CCCCEEEEeCCcc-cCCCCCC-HHHHHHHHhhC--CC--EEEEEeCCCCHHHHHHHHHhcCCCC--EEEEEecHH
Confidence 3444 3679999999753 3344444 45555555434 34 5662 23456677777777654 34 999998776
Q ss_pred hHHHH
Q 045485 107 VFTKA 111 (164)
Q Consensus 107 ~~~~~ 111 (164)
.+...
T Consensus 205 ~~l~~ 209 (318)
T 3qfe_A 205 FLIGG 209 (318)
T ss_dssp GHHHH
T ss_pred HHHHH
Confidence 55443
No 470
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=20.67 E-value=2.7e+02 Score=20.78 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=43.1
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+.+++||.+|+. ..+... ...+.++. ++ . .|++| -+..+.....+.++..+-+ |.+++..+..
T Consensus 125 va~a-~~lPiilYn~P~~--tg~~l~-~~~~~~La-~~--p--nIvgiKdssgd~~~~~~~~~~~~~~--f~v~~G~d~~ 193 (300)
T 3eb2_A 125 IADA-VEIPVVIYTNPQF--QRSDLT-LDVIARLA-EH--P--RIRYIKDASTNTGRLLSIINRCGDA--LQVFSASAHI 193 (300)
T ss_dssp HHHH-CSSCEEEEECTTT--CSSCCC-HHHHHHHH-TS--T--TEEEEEECSSBHHHHHHHHHHHGGG--SEEEECTTSC
T ss_pred HHHH-CCCCEEEEECccc--cCCCCC-HHHHHHHH-cC--C--CEEEEEcCCCCHHHHHHHHHHcCCC--eEEEeCcHHH
Confidence 3444 3678999998752 345544 44455552 22 3 35662 2334567777777766555 9999987765
Q ss_pred HHHH
Q 045485 108 FTKA 111 (164)
Q Consensus 108 ~~~~ 111 (164)
+...
T Consensus 194 ~~~~ 197 (300)
T 3eb2_A 194 PAAV 197 (300)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 471
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=20.66 E-value=1.5e+02 Score=17.97 Aligned_cols=56 Identities=20% Similarity=0.034 Sum_probs=35.8
Q ss_pred CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEee
Q 045485 70 GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNLE 147 (164)
Q Consensus 70 ~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~~ 147 (164)
+...++ +..++.++..+.++..|.+ +. ..+.. ..+|.. +..++.|++|.+..+...
T Consensus 71 ~~~~~~-~~v~d~~~~~~~l~~~G~~--~~--~~~~~---~~~g~~--------------~~~~~~DPdG~~iel~~~ 126 (135)
T 1f9z_A 71 AYGHIA-LSVDNAAEACEKIRQNGGN--VT--REAGP---VKGGTT--------------VIAFVEDPDGYKIELIEE 126 (135)
T ss_dssp SEEEEE-EECSCHHHHHHHHHHTTCE--EE--EEEEE---CTTSCC--------------EEEEEECTTSCEEEEEEC
T ss_pred CccEEE-EEeCCHHHHHHHHHHCCCE--Ee--cCCcc---CCCCce--------------eEEEEECCCCCEEEEEec
Confidence 444577 7788888888888888876 32 22110 012221 347899999998877654
No 472
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=20.64 E-value=1.3e+02 Score=19.35 Aligned_cols=55 Identities=25% Similarity=0.280 Sum_probs=28.4
Q ss_pred EEecCCCCcC--C---CcCchhhHHHhHHHHHhCCCcEEEEEecCCH------HHHHHHHHHhCCC
Q 045485 41 FAVPGAFTPT--C---SQKHLPGFVEKSAELKSKGVDIVACISVNDA------FVMKAWKENLGIN 95 (164)
Q Consensus 41 ~f~~~~~cp~--C---~~~~l~~l~~~~~~~~~~~v~vi~~is~d~~------~~~~~~~~~~~~~ 95 (164)
+|=++-+|+. | ...++-.|....+.++++|+.|-=..-.+.| ..++++++++|..
T Consensus 6 ifepamCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~ 71 (110)
T 3kgk_A 6 VFDPAMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLAQQPMSFVQNEKVKAFIEASGAE 71 (110)
T ss_dssp EEECC-------------CHHHHHHHHHHHHHHHTCCEEEEETTTCTTHHHHSHHHHHHHHHHCGG
T ss_pred EecchhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEccccChHHHhcCHHHHHHHHHcCcc
Confidence 4446666643 2 2223777777788888888876552222333 3456677776643
No 473
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=20.54 E-value=1.9e+02 Score=18.86 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=33.1
Q ss_pred HHHHHHHHHhCCCCceEEEEeCc-----chHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEE
Q 045485 83 FVMKAWKENLGINDEVLLLSDGN-----GVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVL 144 (164)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~D~~-----~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~ 144 (164)
+.+.+++++++++ +..+.-+. .++++.+|+... .-..+.++-+.+|+..-.
T Consensus 3 ~~~~~~L~~~~i~--~~~~~~p~~~~t~~~~a~~lg~~~~---------~~~Ktlv~~~~~~~~~l~ 58 (152)
T 1wdv_A 3 EKVEEWIKARGLT--WRLLIMQKPTRTVAEAAALLGVSES---------EIVKTLIVLDNAGGVYAV 58 (152)
T ss_dssp CHHHHHHHHHTCC--CEEEECSSCCSSHHHHHHHHTSCGG---------GBEEEEEEEETTSCEEEE
T ss_pred HHHHHHHHHCCCC--cEEEEcCCCCCCHHHHHHHcCCCHH---------HeEEEEEEEeCCCcEEEE
Confidence 4678999999999 87776543 266777887632 222456666666654333
No 474
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=20.38 E-value=1.6e+02 Score=17.90 Aligned_cols=52 Identities=17% Similarity=-0.045 Sum_probs=35.1
Q ss_pred CCcEEEEEecCCHHHHHHHHHHhCCCCceEEEEeCcchHHHHhCCccccCCCCCCCCcceeEEEEEecCCcEEEEEe
Q 045485 70 GVDIVACISVNDAFVMKAWKENLGINDEVLLLSDGNGVFTKAIGCELDLSDKPMGLGVRSRRYALLAENGVVKVLNL 146 (164)
Q Consensus 70 ~v~vi~~is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~~~~~~~~p~~~lid~~G~I~~~~~ 146 (164)
+...++ +..++.++..+.+++.|.. +.- .+. ..|. +..++.|++|.+..+..
T Consensus 72 ~~~~~~-f~v~d~~~~~~~l~~~G~~--~~~--~~~-----~~g~---------------~~~~~~DPdG~~iel~~ 123 (126)
T 2qqz_A 72 KRAHPA-FYVLKIDEFKQELIKQGIE--VID--DHA-----RPDV---------------IRFYVSDPFGNRIEFME 123 (126)
T ss_dssp SSSCEE-EEETTHHHHHHHHHHTTCC--CEE--ECS-----STTE---------------EEEEEECTTSCEEEEEE
T ss_pred CceEEE-EEcCCHHHHHHHHHHcCCC--ccC--CCC-----CCCe---------------eEEEEECCCCCEEEEEe
Confidence 455577 6778888888888888877 432 221 1121 45889999999877654
No 475
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=20.30 E-value=2e+02 Score=21.38 Aligned_cols=72 Identities=19% Similarity=0.176 Sum_probs=44.6
Q ss_pred hhhhcCCCcEEEEEecCCCCcCCCcCchhhHHHhHHHHHhCCCcEEEE-EecCCHHHHHHHHHHhCCCCceEEEEeCcch
Q 045485 29 VSDLTSNKKAILFAVPGAFTPTCSQKHLPGFVEKSAELKSKGVDIVAC-ISVNDAFVMKAWKENLGINDEVLLLSDGNGV 107 (164)
Q Consensus 29 l~d~~~g~~vvl~f~~~~~cp~C~~~~l~~l~~~~~~~~~~~v~vi~~-is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~ 107 (164)
+++- .+.+++||.+|+. ..+... ...+.++. ++ .+ +++| -+..+.....+.++..+-+ |.+++..+..
T Consensus 122 ia~a-~~lPiilYn~P~~--tg~~l~-~~~~~~La-~~--pn--ivgiK~ssgd~~~~~~~~~~~~~~--f~v~~G~d~~ 190 (291)
T 3tak_A 122 IAEA-VELPLILYNVPGR--TGVDLS-NDTAVRLA-EI--PN--IVGIKDATGDVPRGKALIDALNGK--MAVYSGDDET 190 (291)
T ss_dssp HHHH-CCSCEEEEECHHH--HSCCCC-HHHHHHHT-TS--TT--EEEEEECSCCHHHHHHHHHHHTTS--SEEEECCHHH
T ss_pred HHHh-cCCCEEEEecccc--cCCCCC-HHHHHHHH-cC--CC--EEEEEeCCCCHHHHHHHHHHcCCC--eEEEECcHHH
Confidence 3444 3678999998752 234444 44555554 22 33 5662 2445677888888877766 9999988765
Q ss_pred HHHH
Q 045485 108 FTKA 111 (164)
Q Consensus 108 ~~~~ 111 (164)
+...
T Consensus 191 ~~~~ 194 (291)
T 3tak_A 191 AWEL 194 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 476
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=20.20 E-value=1.3e+02 Score=21.71 Aligned_cols=39 Identities=15% Similarity=0.044 Sum_probs=30.5
Q ss_pred hhhHHHhHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 56 LPGFVEKSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 56 l~~l~~~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
.+...+..++++++|+.++. .+.-+...+..+++..+..
T Consensus 41 ~~~~~~al~~l~~~G~~v~i-aTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 41 DPEYMSVIDRLIDKGIIFVV-CSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp CHHHHHHHHHHHHTTCEEEE-ECSSCHHHHHHHTGGGGGG
T ss_pred CHHHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHHHcCCC
Confidence 46677777888889998777 7887888888888777665
No 477
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=20.05 E-value=1.6e+02 Score=20.61 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=26.1
Q ss_pred hHHHHHhCCCcEEEEEecCCHHHHHHHHHHhCCC
Q 045485 62 KSAELKSKGVDIVACISVNDAFVMKAWKENLGIN 95 (164)
Q Consensus 62 ~~~~~~~~~v~vi~~is~d~~~~~~~~~~~~~~~ 95 (164)
..+.++++|+.+.. +|.++....+..+++.|+.
T Consensus 84 ~L~~L~~~G~~l~I-~T~~~~~~~~~~l~~lgi~ 116 (211)
T 3ij5_A 84 GIRCLITSDIDVAI-ITGRRAKLLEDRANTLGIT 116 (211)
T ss_dssp HHHHHHHTTCEEEE-ECSSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCEEEE-EeCCCHHHHHHHHHHcCCc
Confidence 46778889987544 8888878888888888886
Done!